Query 018248
Match_columns 359
No_of_seqs 733 out of 1968
Neff 11.7
Searched_HMMs 29240
Date Mon Mar 25 12:16:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018248.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018248hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 3.5E-47 1.2E-51 318.8 38.3 282 3-337 29-320 (321)
2 1vyh_C Platelet-activating fac 100.0 2.7E-46 9.2E-51 324.1 37.4 278 4-336 106-409 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 4.5E-45 1.5E-49 308.9 40.2 279 4-335 53-340 (340)
4 2pbi_B Guanine nucleotide-bind 100.0 3.1E-44 1.1E-48 305.1 39.1 281 4-335 62-354 (354)
5 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.8E-44 1.3E-48 303.8 35.3 293 4-338 13-335 (345)
6 4gqb_B Methylosome protein 50; 100.0 1.5E-44 5E-49 305.1 31.9 280 5-339 29-332 (344)
7 3frx_A Guanine nucleotide-bind 100.0 2.6E-43 8.9E-48 295.3 36.2 290 3-338 14-317 (319)
8 2ynn_A Coatomer subunit beta'; 100.0 6.4E-43 2.2E-47 291.0 37.2 280 4-338 11-302 (304)
9 4g56_B MGC81050 protein; prote 100.0 3.5E-44 1.2E-48 305.0 28.2 280 4-338 40-343 (357)
10 3vu4_A KMHSV2; beta-propeller 100.0 1E-42 3.5E-47 295.9 36.5 307 3-346 16-344 (355)
11 2xzm_R RACK1; ribosome, transl 100.0 4.4E-42 1.5E-46 291.0 38.6 294 4-338 19-340 (343)
12 3iz6_a 40S ribosomal protein R 100.0 2.4E-43 8.3E-48 302.7 30.1 288 3-338 63-375 (380)
13 1nr0_A Actin interacting prote 100.0 4.3E-42 1.5E-46 312.5 37.3 246 4-256 57-357 (611)
14 4ery_A WD repeat-containing pr 100.0 2.1E-41 7E-46 283.3 37.8 282 3-337 20-311 (312)
15 1erj_A Transcriptional repress 100.0 2.5E-41 8.4E-46 291.6 37.8 282 4-338 62-389 (393)
16 2hes_X YDR267CP; beta-propelle 100.0 2.1E-41 7.2E-46 285.1 34.5 284 4-338 12-328 (330)
17 2ymu_A WD-40 repeat protein; u 100.0 3.8E-41 1.3E-45 305.1 37.4 272 4-335 301-577 (577)
18 4aow_A Guanine nucleotide-bind 100.0 1.4E-40 4.9E-45 281.4 38.3 291 4-338 36-337 (340)
19 1nr0_A Actin interacting prote 100.0 1.2E-40 4.2E-45 303.0 38.3 320 4-338 16-355 (611)
20 3zwl_B Eukaryotic translation 100.0 1.2E-39 4.1E-44 278.7 39.8 279 4-338 30-346 (369)
21 1gxr_A ESG1, transducin-like e 100.0 1.5E-39 5.2E-44 274.7 38.7 278 4-336 49-335 (337)
22 2ymu_A WD-40 repeat protein; u 100.0 5.3E-39 1.8E-43 291.1 39.1 275 3-337 259-538 (577)
23 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-39 3.8E-44 279.5 32.0 310 4-338 6-361 (372)
24 3dm0_A Maltose-binding peripla 100.0 1.9E-39 6.6E-44 299.7 35.8 300 4-337 380-692 (694)
25 3ow8_A WD repeat-containing pr 100.0 3.9E-39 1.3E-43 270.0 33.9 238 3-253 77-320 (321)
26 1sq9_A Antiviral protein SKI8; 100.0 6E-39 2.1E-43 277.4 34.7 291 3-338 13-395 (397)
27 3ei3_B DNA damage-binding prot 100.0 4.9E-39 1.7E-43 276.6 33.2 281 3-338 70-382 (383)
28 2ynn_A Coatomer subunit beta'; 100.0 7.4E-39 2.5E-43 266.5 33.0 244 43-338 7-259 (304)
29 3i2n_A WD repeat-containing pr 100.0 1.1E-39 3.7E-44 277.9 28.1 302 4-338 16-353 (357)
30 4h5i_A Guanine nucleotide-exch 100.0 5.5E-39 1.9E-43 273.7 32.1 282 7-339 15-344 (365)
31 1vyh_C Platelet-activating fac 100.0 3E-39 1E-43 279.9 30.3 239 4-253 148-410 (410)
32 4gqb_B Methylosome protein 50; 100.0 4E-39 1.4E-43 271.9 29.7 241 5-256 81-333 (344)
33 1r5m_A SIR4-interacting protei 100.0 1.2E-38 4.2E-43 277.6 33.3 296 5-337 107-424 (425)
34 2pm9_A Protein WEB1, protein t 100.0 3.6E-40 1.2E-44 286.8 23.3 310 4-338 65-414 (416)
35 2j04_B YDR362CP, TAU91; beta p 100.0 2.4E-39 8.3E-44 286.4 26.7 316 5-338 132-517 (524)
36 3dwl_C Actin-related protein 2 100.0 2E-40 6.9E-45 284.7 18.9 237 5-254 10-281 (377)
37 4e54_B DNA damage-binding prot 100.0 3.3E-39 1.1E-43 282.1 26.2 284 4-338 117-430 (435)
38 3k26_A Polycomb protein EED; W 100.0 1.2E-38 4E-43 272.4 28.2 285 3-337 15-365 (366)
39 3odt_A Protein DOA1; ubiquitin 100.0 5.1E-37 1.7E-41 256.6 36.7 274 3-338 15-296 (313)
40 1r5m_A SIR4-interacting protei 100.0 1.1E-37 3.8E-42 271.6 33.0 279 5-338 44-361 (425)
41 2pm7_B Protein transport prote 100.0 1.5E-37 5.3E-42 257.7 32.0 246 3-255 6-286 (297)
42 4g56_B MGC81050 protein; prote 100.0 1.3E-38 4.4E-43 270.8 25.6 243 4-256 92-345 (357)
43 1got_B GT-beta; complex (GTP-b 100.0 1.3E-37 4.4E-42 263.2 31.6 236 4-251 95-340 (340)
44 3vl1_A 26S proteasome regulato 100.0 5.5E-38 1.9E-42 273.4 29.8 277 8-339 58-366 (420)
45 2pm9_A Protein WEB1, protein t 100.0 1.8E-38 6E-43 276.1 24.8 283 4-339 10-338 (416)
46 3gre_A Serine/threonine-protei 100.0 1.1E-37 3.6E-42 273.0 29.5 310 3-335 60-437 (437)
47 3vl1_A 26S proteasome regulato 100.0 5.9E-37 2E-41 266.9 33.2 286 7-338 98-419 (420)
48 1gxr_A ESG1, transducin-like e 100.0 8E-37 2.7E-41 258.0 33.0 276 5-338 8-296 (337)
49 4aez_A CDC20, WD repeat-contai 100.0 2.6E-36 8.9E-41 261.1 34.8 275 9-338 96-380 (401)
50 4gga_A P55CDC, cell division c 100.0 4.6E-36 1.6E-40 261.1 36.4 276 8-338 107-395 (420)
51 1erj_A Transcriptional repress 100.0 1.5E-36 5E-41 261.8 32.6 237 7-256 124-391 (393)
52 3sfz_A APAF-1, apoptotic pepti 100.0 9.3E-37 3.2E-41 299.1 35.4 314 4-338 613-1034(1249)
53 2pm7_B Protein transport prote 100.0 1.5E-36 5E-41 251.8 31.1 246 48-338 7-285 (297)
54 3bg1_A Protein SEC13 homolog; 100.0 2.1E-37 7.3E-42 259.1 26.2 244 3-255 10-294 (316)
55 3dw8_B Serine/threonine-protei 100.0 8E-37 2.7E-41 268.2 30.0 242 4-256 26-375 (447)
56 1yfq_A Cell cycle arrest prote 100.0 1.4E-36 4.9E-41 257.2 29.8 278 2-336 7-322 (342)
57 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.2E-36 7.5E-41 256.1 30.8 246 3-258 58-339 (345)
58 2hes_X YDR267CP; beta-propelle 100.0 2.6E-36 9E-41 254.0 30.5 241 5-254 57-328 (330)
59 3frx_A Guanine nucleotide-bind 100.0 8.5E-36 2.9E-40 249.7 33.4 244 40-338 8-267 (319)
60 2pbi_B Guanine nucleotide-bind 100.0 4.5E-36 1.5E-40 254.9 31.5 236 5-251 105-354 (354)
61 3mkq_A Coatomer beta'-subunit; 100.0 8.3E-36 2.8E-40 280.6 36.3 280 4-338 11-302 (814)
62 2oaj_A Protein SNI1; WD40 repe 100.0 8E-36 2.8E-40 280.9 36.0 199 4-215 15-247 (902)
63 4a11_B DNA excision repair pro 100.0 1.3E-35 4.5E-40 257.2 34.3 288 3-339 40-366 (408)
64 4ggc_A P55CDC, cell division c 100.0 7.3E-35 2.5E-39 244.1 37.5 275 9-338 28-315 (318)
65 3mmy_A MRNA export factor; mRN 100.0 1E-35 3.4E-40 254.3 30.8 281 3-339 36-347 (368)
66 3bg1_A Protein SEC13 homolog; 100.0 2.4E-36 8.1E-41 252.7 26.0 245 48-338 11-293 (316)
67 3v7d_B Cell division control p 100.0 8.5E-35 2.9E-39 256.5 37.3 271 4-338 119-421 (464)
68 1pgu_A Actin interacting prote 100.0 4.9E-35 1.7E-39 266.9 36.7 281 4-338 201-614 (615)
69 3iz6_a 40S ribosomal protein R 100.0 8.3E-36 2.8E-40 255.9 27.0 244 4-256 106-377 (380)
70 3f3f_A Nucleoporin SEH1; struc 100.0 3.9E-35 1.3E-39 248.6 30.8 243 3-256 8-339 (351)
71 4ery_A WD repeat-containing pr 100.0 2.3E-34 8E-39 240.5 33.7 248 42-338 16-268 (312)
72 1p22_A F-BOX/WD-repeat protein 100.0 7.9E-35 2.7E-39 254.5 32.2 278 4-339 131-415 (435)
73 1pgu_A Actin interacting prote 100.0 1E-34 3.4E-39 264.9 33.5 280 3-338 15-328 (615)
74 3jrp_A Fusion protein of prote 100.0 6.5E-35 2.2E-39 250.3 30.3 247 3-256 8-289 (379)
75 3sfz_A APAF-1, apoptotic pepti 100.0 6.2E-36 2.1E-40 293.3 26.1 278 5-337 960-1248(1249)
76 2xzm_R RACK1; ribosome, transl 100.0 1.1E-34 3.7E-39 245.6 30.2 238 4-255 74-341 (343)
77 4h5i_A Guanine nucleotide-exch 100.0 1.9E-35 6.4E-40 251.9 25.1 244 4-256 71-345 (365)
78 4aez_A CDC20, WD repeat-contai 100.0 2.7E-34 9.1E-39 248.5 32.7 244 4-258 132-384 (401)
79 2oaj_A Protein SNI1; WD40 repe 100.0 4.2E-35 1.4E-39 276.0 29.9 293 4-345 149-668 (902)
80 2ovr_B FBW7, F-BOX/WD repeat p 100.0 7E-34 2.4E-38 249.3 35.2 305 4-339 116-443 (445)
81 3mkq_A Coatomer beta'-subunit; 100.0 4.3E-33 1.5E-37 262.2 38.2 241 4-256 53-304 (814)
82 3k26_A Polycomb protein EED; W 100.0 3.2E-34 1.1E-38 244.8 27.3 238 4-254 67-366 (366)
83 4gga_A P55CDC, cell division c 100.0 3.6E-33 1.2E-37 242.8 34.1 242 4-257 145-398 (420)
84 2aq5_A Coronin-1A; WD40 repeat 100.0 8.1E-34 2.8E-38 245.6 28.6 286 8-347 36-348 (402)
85 3v7d_B Cell division control p 100.0 1.8E-32 6.1E-37 241.7 36.9 272 4-337 160-462 (464)
86 3jrp_A Fusion protein of prote 100.0 2.2E-33 7.5E-38 240.8 30.0 246 48-338 9-287 (379)
87 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.2E-33 1.4E-37 244.6 32.2 293 6-345 4-397 (450)
88 1sq9_A Antiviral protein SKI8; 100.0 1.7E-33 5.8E-38 243.2 28.0 240 4-255 60-396 (397)
89 3jro_A Fusion protein of prote 100.0 1.5E-34 5.3E-39 268.5 22.2 246 3-257 6-288 (753)
90 2j04_A TAU60, YPL007P, hypothe 100.0 2.9E-34 9.9E-39 248.5 21.2 257 4-337 13-296 (588)
91 3f3f_A Nucleoporin SEH1; struc 100.0 9.1E-33 3.1E-37 234.0 30.1 282 48-340 9-339 (351)
92 4ggc_A P55CDC, cell division c 100.0 5E-32 1.7E-36 226.8 33.1 242 3-256 64-317 (318)
93 3dm0_A Maltose-binding peripla 100.0 1.4E-32 4.9E-37 253.9 31.1 238 4-254 428-693 (694)
94 3ei3_B DNA damage-binding prot 100.0 1.2E-31 4E-36 230.6 33.7 256 43-338 67-339 (383)
95 3bws_A Protein LP49; two-domai 100.0 1.4E-31 4.6E-36 234.0 34.1 279 6-337 122-431 (433)
96 2xyi_A Probable histone-bindin 100.0 2.4E-32 8.1E-37 238.3 28.9 293 7-338 46-410 (430)
97 3dwl_C Actin-related protein 2 100.0 8.6E-34 2.9E-38 243.4 19.1 239 49-337 10-280 (377)
98 4aow_A Guanine nucleotide-bind 100.0 9.2E-32 3.2E-36 227.4 31.2 242 3-256 83-339 (340)
99 1k8k_C P40, ARP2/3 complex 41 100.0 4.3E-32 1.5E-36 232.3 29.3 238 48-338 6-274 (372)
100 3zwl_B Eukaryotic translation 100.0 1.7E-31 5.8E-36 228.2 32.6 239 4-256 72-348 (369)
101 2xyi_A Probable histone-bindin 100.0 3.9E-32 1.3E-36 236.9 27.3 242 4-255 126-411 (430)
102 3gre_A Serine/threonine-protei 100.0 1.6E-32 5.4E-37 240.2 24.3 288 13-338 34-359 (437)
103 3i2n_A WD repeat-containing pr 100.0 2.4E-32 8.3E-37 232.4 24.6 239 4-256 63-355 (357)
104 2j04_B YDR362CP, TAU91; beta p 100.0 1.9E-32 6.7E-37 242.3 23.8 240 5-256 206-519 (524)
105 3dw8_B Serine/threonine-protei 100.0 1.3E-31 4.5E-36 235.0 28.4 245 49-338 27-373 (447)
106 3lrv_A PRE-mRNA-splicing facto 100.0 3.2E-32 1.1E-36 230.5 23.2 261 14-337 44-332 (343)
107 3odt_A Protein DOA1; ubiquitin 100.0 5.7E-31 2E-35 219.8 30.2 234 4-257 57-299 (313)
108 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-31 6E-36 231.0 27.4 242 4-256 79-344 (402)
109 3jro_A Fusion protein of prote 100.0 4.4E-32 1.5E-36 252.1 25.1 246 48-338 7-285 (753)
110 1l0q_A Surface layer protein; 100.0 6.2E-30 2.1E-34 220.4 36.7 262 19-338 3-275 (391)
111 4e54_B DNA damage-binding prot 100.0 1.2E-31 4.3E-36 234.2 21.9 201 48-256 117-329 (435)
112 4gq1_A NUP37; propeller, trans 100.0 6E-31 2.1E-35 226.6 24.5 259 8-336 91-387 (393)
113 1yfq_A Cell cycle arrest prote 100.0 1.2E-30 4.1E-35 220.7 25.7 252 47-338 8-282 (342)
114 1l0q_A Surface layer protein; 100.0 1.7E-28 5.8E-33 211.5 38.0 238 5-256 30-277 (391)
115 2w18_A PALB2, fancn, partner a 100.0 3.7E-29 1.3E-33 203.9 31.6 278 9-336 42-355 (356)
116 4a11_B DNA excision repair pro 100.0 7.8E-30 2.7E-34 220.9 27.5 241 4-258 97-369 (408)
117 2j04_A TAU60, YPL007P, hypothe 100.0 1.6E-31 5.6E-36 231.4 16.6 285 4-338 50-362 (588)
118 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.8E-29 1.6E-33 218.8 31.1 256 50-336 4-337 (450)
119 3mmy_A MRNA export factor; mRN 100.0 2.5E-29 8.6E-34 214.6 27.3 241 4-256 84-348 (368)
120 1p22_A F-BOX/WD-repeat protein 100.0 4.3E-29 1.5E-33 218.2 26.8 231 4-257 171-417 (435)
121 3lrv_A PRE-mRNA-splicing facto 100.0 2.3E-29 7.9E-34 212.9 23.5 228 60-339 46-293 (343)
122 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1E-27 3.5E-32 210.1 32.7 230 4-256 157-393 (445)
123 3bws_A Protein LP49; two-domai 100.0 1.6E-27 5.5E-32 208.2 33.1 238 4-254 167-432 (433)
124 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.1E-28 7.2E-33 211.9 26.3 279 7-337 63-386 (415)
125 3vu4_A KMHSV2; beta-propeller 100.0 8.2E-28 2.8E-32 204.1 29.2 229 48-339 17-272 (355)
126 2w18_A PALB2, fancn, partner a 100.0 2.1E-28 7.3E-33 199.4 24.2 175 74-253 155-356 (356)
127 1nir_A Nitrite reductase; hemo 100.0 1.5E-25 5.3E-30 199.7 32.1 281 13-341 144-461 (543)
128 2ecf_A Dipeptidyl peptidase IV 100.0 4.9E-26 1.7E-30 212.1 28.8 279 6-338 36-413 (741)
129 1nir_A Nitrite reductase; hemo 99.9 1.4E-24 4.7E-29 193.6 33.4 283 9-338 181-514 (543)
130 3u4y_A Uncharacterized protein 99.9 1.5E-24 5.1E-29 182.5 30.2 280 12-338 3-304 (331)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.3E-24 7.7E-29 186.6 31.3 226 18-256 143-389 (415)
132 3vgz_A Uncharacterized protein 99.9 1.1E-23 3.9E-28 178.6 34.5 267 6-330 40-336 (353)
133 1ri6_A Putative isomerase YBHE 99.9 5.3E-24 1.8E-28 179.9 31.9 274 20-341 7-311 (343)
134 4gq1_A NUP37; propeller, trans 99.9 5.2E-26 1.8E-30 195.8 19.1 216 3-254 133-389 (393)
135 1xfd_A DIP, dipeptidyl aminope 99.9 2.1E-25 7.3E-30 207.2 22.9 288 6-340 16-395 (723)
136 1pby_B Quinohemoprotein amine 99.9 7.6E-24 2.6E-28 178.4 28.4 261 19-338 2-310 (337)
137 2ojh_A Uncharacterized protein 99.9 4.6E-24 1.6E-28 176.3 24.7 248 26-329 21-293 (297)
138 2z3z_A Dipeptidyl aminopeptida 99.9 2E-23 6.7E-28 193.5 31.2 275 7-338 82-435 (706)
139 3o4h_A Acylamino-acid-releasin 99.9 3.6E-24 1.2E-28 193.9 24.3 268 6-338 21-313 (582)
140 2z3z_A Dipeptidyl aminopeptida 99.9 8.7E-24 3E-28 195.8 26.1 235 8-253 27-341 (706)
141 2ecf_A Dipeptidyl peptidase IV 99.9 1.9E-23 6.6E-28 194.6 28.2 275 7-336 109-457 (741)
142 1k32_A Tricorn protease; prote 99.9 2.6E-23 8.9E-28 200.1 29.4 272 4-336 201-500 (1045)
143 3hfq_A Uncharacterized protein 99.9 4.5E-22 1.5E-26 168.5 32.2 273 26-346 15-324 (347)
144 1k32_A Tricorn protease; prote 99.9 8.2E-23 2.8E-27 196.7 28.1 277 5-340 294-639 (1045)
145 2ojh_A Uncharacterized protein 99.9 4.1E-23 1.4E-27 170.5 22.4 234 5-245 40-293 (297)
146 1ri6_A Putative isomerase YBHE 99.9 4.4E-22 1.5E-26 168.0 28.1 239 5-254 36-308 (343)
147 1pby_B Quinohemoprotein amine 99.9 6.2E-22 2.1E-26 166.7 27.0 239 8-256 35-312 (337)
148 3u4y_A Uncharacterized protein 99.9 7.7E-22 2.6E-26 165.9 27.3 241 6-256 40-306 (331)
149 3vgz_A Uncharacterized protein 99.9 3.8E-21 1.3E-25 163.0 30.5 243 50-338 40-303 (353)
150 1xfd_A DIP, dipeptidyl aminope 99.9 4.9E-22 1.7E-26 184.6 26.4 240 8-256 62-395 (723)
151 3hfq_A Uncharacterized protein 99.9 3.9E-21 1.3E-25 162.7 27.2 240 6-254 39-317 (347)
152 3pe7_A Oligogalacturonate lyas 99.9 1.1E-21 3.6E-26 168.8 23.5 286 12-339 41-383 (388)
153 3scy_A Hypothetical bacterial 99.9 2.1E-20 7.1E-25 159.1 31.0 284 15-346 10-344 (361)
154 1jmx_B Amine dehydrogenase; ox 99.9 1.1E-20 3.8E-25 159.9 26.0 228 11-256 4-327 (349)
155 1z68_A Fibroblast activation p 99.9 3.5E-22 1.2E-26 185.5 16.7 242 10-256 19-348 (719)
156 3o4h_A Acylamino-acid-releasin 99.9 4.1E-21 1.4E-25 173.9 20.9 230 50-336 21-274 (582)
157 1jmx_B Amine dehydrogenase; ox 99.9 6.1E-20 2.1E-24 155.3 26.7 227 58-338 7-325 (349)
158 3scy_A Hypothetical bacterial 99.9 1.3E-19 4.5E-24 154.2 28.1 237 6-254 49-337 (361)
159 1jof_A Carboxy-CIS,CIS-muconat 99.9 4.1E-19 1.4E-23 151.2 29.0 273 20-339 4-342 (365)
160 3c5m_A Oligogalacturonate lyas 99.9 1.2E-20 4.1E-25 162.6 19.4 286 9-341 38-385 (396)
161 4a5s_A Dipeptidyl peptidase 4 99.9 2.5E-20 8.4E-25 173.2 22.8 246 6-256 16-355 (740)
162 2oit_A Nucleoporin 214KDA; NH2 99.9 1.1E-18 3.9E-23 151.4 29.1 242 5-254 35-333 (434)
163 2oit_A Nucleoporin 214KDA; NH2 99.8 9.4E-20 3.2E-24 158.2 20.4 169 76-253 23-222 (434)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 5.2E-19 1.8E-23 150.6 23.9 242 7-255 40-342 (365)
165 1z68_A Fibroblast activation p 99.8 3E-19 1E-23 165.8 22.5 233 8-254 61-391 (719)
166 3azo_A Aminopeptidase; POP fam 99.8 9.5E-18 3.3E-22 154.2 30.6 240 5-254 22-323 (662)
167 1q7f_A NHL, brain tumor CG1071 99.8 7E-17 2.4E-21 132.7 31.8 242 4-256 27-282 (286)
168 2gop_A Trilobed protease; beta 99.8 9.4E-17 3.2E-21 135.7 31.1 259 6-337 14-330 (347)
169 2oiz_A Aromatic amine dehydrog 99.8 1.5E-16 5.1E-21 134.9 27.8 232 11-255 54-335 (361)
170 3fvz_A Peptidyl-glycine alpha- 99.8 2E-16 6.7E-21 132.6 27.9 240 6-256 23-324 (329)
171 1q7f_A NHL, brain tumor CG1071 99.8 1.1E-15 3.7E-20 125.5 31.5 238 48-338 27-280 (286)
172 3fvz_A Peptidyl-glycine alpha- 99.8 1.3E-16 4.5E-21 133.7 25.9 247 50-338 23-322 (329)
173 3pe7_A Oligogalacturonate lyas 99.8 2.1E-16 7.1E-21 135.7 27.7 196 56-256 41-275 (388)
174 4a5s_A Dipeptidyl peptidase 4 99.8 6.7E-17 2.3E-21 150.2 24.8 194 51-256 17-296 (740)
175 2dg1_A DRP35, lactonase; beta 99.8 7.3E-16 2.5E-20 129.5 27.5 236 6-253 5-262 (333)
176 2xdw_A Prolyl endopeptidase; a 99.8 5.2E-16 1.8E-20 143.6 28.8 245 5-256 123-416 (710)
177 3c5m_A Oligogalacturonate lyas 99.7 3.1E-16 1.1E-20 134.9 22.5 201 53-256 38-275 (396)
178 3azo_A Aminopeptidase; POP fam 99.7 1.9E-16 6.5E-21 145.6 22.4 250 48-339 21-324 (662)
179 3dsm_A Uncharacterized protein 99.7 7.7E-15 2.6E-19 122.8 29.9 218 26-256 16-255 (328)
180 2oiz_A Aromatic amine dehydrog 99.7 1.3E-15 4.4E-20 129.1 25.2 266 16-338 13-334 (361)
181 2bkl_A Prolyl endopeptidase; m 99.7 3.6E-15 1.2E-19 137.6 28.1 279 15-338 76-397 (695)
182 2xdw_A Prolyl endopeptidase; a 99.7 8.6E-15 2.9E-19 135.5 29.5 279 16-338 81-414 (710)
183 1qks_A Cytochrome CD1 nitrite 99.7 6E-14 2.1E-18 125.0 33.3 276 16-339 165-478 (567)
184 2gop_A Trilobed protease; beta 99.7 5.2E-15 1.8E-19 125.0 25.5 225 8-253 60-330 (347)
185 3e5z_A Putative gluconolactona 99.7 3.3E-14 1.1E-18 117.3 28.1 230 50-339 27-285 (296)
186 2bkl_A Prolyl endopeptidase; m 99.7 1.9E-15 6.4E-20 139.6 22.8 244 4-256 118-399 (695)
187 3no2_A Uncharacterized protein 99.7 2.2E-14 7.5E-19 116.6 26.4 175 74-256 13-197 (276)
188 2z2n_A Virginiamycin B lyase; 99.7 1.6E-12 5.4E-17 107.2 37.1 232 5-252 13-253 (299)
189 1qks_A Cytochrome CD1 nitrite 99.7 1.2E-12 4.1E-17 116.6 36.4 291 7-338 197-538 (567)
190 3e5z_A Putative gluconolactona 99.7 1.3E-13 4.6E-18 113.6 28.4 229 6-256 27-288 (296)
191 1rwi_B Serine/threonine-protei 99.7 8E-14 2.7E-18 113.3 26.0 234 8-256 25-266 (270)
192 3no2_A Uncharacterized protein 99.7 1.7E-13 5.8E-18 111.4 27.1 211 16-242 3-231 (276)
193 2dg1_A DRP35, lactonase; beta 99.7 3.7E-13 1.3E-17 112.9 30.0 231 5-244 43-300 (333)
194 1yr2_A Prolyl oligopeptidase; 99.6 8.4E-14 2.9E-18 129.4 26.2 241 7-256 163-443 (741)
195 3dsm_A Uncharacterized protein 99.6 8.1E-13 2.8E-17 110.5 28.9 234 7-256 44-303 (328)
196 1yr2_A Prolyl oligopeptidase; 99.6 2.3E-13 7.8E-18 126.5 27.5 278 15-338 115-441 (741)
197 3hrp_A Uncharacterized protein 99.6 3.5E-12 1.2E-16 109.7 30.4 235 7-253 131-409 (409)
198 2mad_H Methylamine dehydrogena 99.6 1.5E-11 5.2E-16 104.2 33.7 269 13-338 27-350 (373)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.7E-12 5.9E-17 107.8 27.5 237 8-256 19-301 (314)
200 3g4e_A Regucalcin; six bladed 99.6 1.1E-11 3.6E-16 102.2 31.1 225 54-327 16-261 (297)
201 2mad_H Methylamine dehydrogena 99.6 5.9E-12 2E-16 106.8 30.2 233 11-257 70-353 (373)
202 2qc5_A Streptogramin B lactona 99.6 7.2E-11 2.5E-15 97.2 36.0 231 6-252 19-258 (300)
203 1rwi_B Serine/threonine-protei 99.6 2.3E-12 7.9E-17 104.6 24.3 235 52-338 25-264 (270)
204 3iuj_A Prolyl endopeptidase; h 99.6 8.2E-13 2.8E-17 121.7 23.4 241 5-256 127-407 (693)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.6E-11 5.6E-16 101.9 29.3 235 52-338 19-299 (314)
206 3g4e_A Regucalcin; six bladed 99.6 1.4E-11 4.7E-16 101.5 27.9 219 8-243 14-261 (297)
207 2ghs_A AGR_C_1268P; regucalcin 99.5 9.9E-11 3.4E-15 97.7 32.0 223 54-329 52-293 (326)
208 3sjl_D Methylamine dehydrogena 99.5 6.5E-12 2.2E-16 105.3 24.1 270 12-338 38-363 (386)
209 3c75_H MADH, methylamine dehyd 99.5 7.5E-12 2.6E-16 106.8 23.9 267 16-338 82-402 (426)
210 3sjl_D Methylamine dehydrogena 99.5 1.7E-11 5.9E-16 102.8 25.2 233 11-256 82-365 (386)
211 3hrp_A Uncharacterized protein 99.5 1.5E-10 5.2E-15 99.5 29.7 244 52-336 132-408 (409)
212 3c75_H MADH, methylamine dehyd 99.5 1.8E-11 6.2E-16 104.5 23.6 234 11-256 122-404 (426)
213 2z2n_A Virginiamycin B lyase; 99.5 4.7E-10 1.6E-14 92.2 31.6 234 6-256 56-297 (299)
214 2ghs_A AGR_C_1268P; regucalcin 99.4 4.7E-10 1.6E-14 93.6 28.7 215 9-243 51-291 (326)
215 2qe8_A Uncharacterized protein 99.4 6.7E-11 2.3E-15 99.5 23.1 226 7-255 17-279 (343)
216 3iuj_A Prolyl endopeptidase; h 99.4 9.9E-11 3.4E-15 107.9 25.4 240 48-338 126-405 (693)
217 1xip_A Nucleoporin NUP159; bet 99.4 3E-11 1E-15 101.7 18.6 171 51-240 38-230 (388)
218 3dr2_A Exported gluconolactona 99.4 5.6E-10 1.9E-14 92.2 25.3 220 7-245 45-298 (305)
219 1xip_A Nucleoporin NUP159; bet 99.4 1.6E-11 5.5E-16 103.3 16.0 170 6-196 37-231 (388)
220 3dr2_A Exported gluconolactona 99.4 1.6E-09 5.5E-14 89.5 27.7 222 51-329 45-298 (305)
221 2ece_A 462AA long hypothetical 99.4 1.9E-08 6.5E-13 85.2 33.4 190 60-255 93-353 (462)
222 2qc5_A Streptogramin B lactona 99.3 8.3E-09 2.8E-13 84.7 29.2 230 6-253 61-299 (300)
223 1kb0_A Quinohemoprotein alcoho 99.3 3.8E-09 1.3E-13 96.7 29.4 225 19-252 78-421 (677)
224 2ece_A 462AA long hypothetical 99.3 6.6E-09 2.3E-13 87.9 28.2 225 15-242 90-399 (462)
225 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1.8E-08 6.1E-13 85.8 30.4 223 18-256 53-298 (376)
226 1kb0_A Quinohemoprotein alcoho 99.3 3E-09 1E-13 97.3 26.6 234 17-256 127-509 (677)
227 1mda_H Methylamine dehydrogena 99.3 3E-10 1E-14 95.4 18.0 226 11-256 69-348 (368)
228 1yiq_A Quinohemoprotein alcoho 99.3 9.8E-09 3.4E-13 94.2 29.4 228 18-253 70-418 (689)
229 3hxj_A Pyrrolo-quinoline quino 99.3 1.3E-09 4.5E-14 91.0 21.0 261 8-338 61-324 (330)
230 1mda_H Methylamine dehydrogena 99.2 9.3E-10 3.2E-14 92.4 19.2 247 28-338 47-346 (368)
231 1fwx_A Nitrous oxide reductase 99.2 2.2E-08 7.4E-13 87.8 28.0 190 56-254 90-361 (595)
232 3q7m_A Lipoprotein YFGL, BAMB; 99.2 1.3E-07 4.3E-12 80.5 31.3 219 17-256 102-339 (376)
233 2iwa_A Glutamine cyclotransfer 99.2 1.9E-08 6.6E-13 79.9 23.4 218 86-339 9-238 (266)
234 1yiq_A Quinohemoprotein alcoho 99.2 2.8E-08 9.5E-13 91.2 27.9 232 18-256 121-507 (689)
235 1npe_A Nidogen, entactin; glyc 99.2 1.8E-07 6.3E-12 75.4 28.3 230 18-256 1-240 (267)
236 1npe_A Nidogen, entactin; glyc 99.1 6E-07 2E-11 72.4 29.1 216 8-236 37-263 (267)
237 2iwa_A Glutamine cyclotransfer 99.1 2.9E-07 9.8E-12 73.2 26.2 195 53-256 23-239 (266)
238 3hxj_A Pyrrolo-quinoline quino 99.1 3.5E-08 1.2E-12 82.3 22.0 217 18-256 107-326 (330)
239 2hz6_A Endoplasmic reticulum t 99.1 1E-10 3.4E-15 99.3 6.0 178 61-256 8-194 (369)
240 1fwx_A Nitrous oxide reductase 99.0 2.2E-08 7.4E-13 87.8 19.2 233 16-256 99-433 (595)
241 2qe8_A Uncharacterized protein 99.0 2.8E-08 9.6E-13 83.5 18.8 229 5-251 65-318 (343)
242 2ad6_A Methanol dehydrogenase 99.0 1.2E-06 4E-11 78.6 29.0 194 17-219 62-344 (571)
243 3nol_A Glutamine cyclotransfer 99.0 4E-07 1.4E-11 71.5 21.6 184 49-243 39-244 (262)
244 3mbr_X Glutamine cyclotransfer 99.0 1.2E-06 4.2E-11 68.1 23.6 185 49-242 17-222 (243)
245 3nol_A Glutamine cyclotransfer 98.9 1.1E-06 3.9E-11 69.0 23.2 178 9-200 45-246 (262)
246 2hz6_A Endoplasmic reticulum t 98.9 1.7E-09 5.9E-14 91.7 7.7 215 17-255 8-237 (369)
247 3nok_A Glutaminyl cyclase; bet 98.9 1.8E-07 6.1E-12 73.5 18.2 161 87-256 44-212 (268)
248 2fp8_A Strictosidine synthase; 98.9 2.6E-06 8.9E-11 70.7 26.6 237 9-256 21-315 (322)
249 1kv9_A Type II quinohemoprotei 98.9 1.6E-06 5.6E-11 79.3 27.1 192 19-218 67-341 (668)
250 3nok_A Glutaminyl cyclase; bet 98.9 7.8E-07 2.7E-11 69.9 21.1 182 49-242 51-253 (268)
251 4a2l_A BT_4663, two-component 98.9 2E-05 7E-10 73.9 34.8 235 9-256 175-438 (795)
252 1w6s_A Methanol dehydrogenase 98.9 1.3E-05 4.3E-10 72.0 31.1 196 17-218 62-350 (599)
253 1kv9_A Type II quinohemoprotei 98.9 1.7E-06 5.8E-11 79.2 25.2 232 18-256 117-490 (668)
254 2p4o_A Hypothetical protein; p 98.8 1.5E-05 5.3E-10 65.5 28.1 225 7-245 32-279 (306)
255 3mbr_X Glutamine cyclotransfer 98.8 5.3E-06 1.8E-10 64.6 23.1 180 7-199 21-224 (243)
256 3v65_B Low-density lipoprotein 98.8 2.9E-05 9.8E-10 66.1 29.6 234 10-256 80-320 (386)
257 2ad6_A Methanol dehydrogenase 98.8 1.6E-06 5.5E-11 77.7 21.9 232 18-256 115-496 (571)
258 1w6s_A Methanol dehydrogenase 98.8 1.1E-05 3.8E-10 72.4 26.9 238 12-256 111-505 (599)
259 3v64_C Agrin; beta propeller, 98.8 5.1E-05 1.8E-09 63.6 31.0 237 7-256 34-277 (349)
260 2fp8_A Strictosidine synthase; 98.8 1.9E-05 6.5E-10 65.5 26.3 180 54-243 22-248 (322)
261 1flg_A Protein (quinoprotein e 98.7 7.5E-05 2.6E-09 67.0 30.4 195 17-219 68-364 (582)
262 1ijq_A LDL receptor, low-densi 98.7 7.9E-05 2.7E-09 61.5 32.0 226 20-256 3-240 (316)
263 3p5b_L Low density lipoprotein 98.7 0.00011 3.7E-09 62.8 31.6 228 19-256 84-322 (400)
264 3v9f_A Two-component system se 98.7 0.00013 4.4E-09 68.3 31.5 237 6-255 257-525 (781)
265 4a2l_A BT_4663, two-component 98.6 0.00031 1.1E-08 65.9 36.8 235 6-256 356-616 (795)
266 1k3i_A Galactose oxidase precu 98.6 1.4E-05 4.8E-10 73.2 24.2 239 11-256 190-499 (656)
267 1flg_A Protein (quinoprotein e 98.6 8.7E-05 3E-09 66.7 28.7 233 18-256 117-518 (582)
268 2xzh_A Clathrin heavy chain 1; 98.6 0.00012 4.2E-09 59.0 32.7 258 27-338 49-332 (365)
269 2p4o_A Hypothetical protein; p 98.6 5.5E-05 1.9E-09 62.2 24.1 188 52-253 33-241 (306)
270 1ijq_A LDL receptor, low-densi 98.5 0.00022 7.5E-09 58.8 30.2 175 75-254 9-195 (316)
271 3sov_A LRP-6, low-density lipo 98.5 0.00022 7.5E-09 58.8 26.9 227 20-256 6-240 (318)
272 2xe4_A Oligopeptidase B; hydro 98.5 1.7E-05 6E-10 73.7 21.8 241 8-256 175-460 (751)
273 3tc9_A Hypothetical hydrolase; 98.5 0.00011 3.9E-09 63.3 25.4 237 8-253 138-429 (430)
274 3v65_B Low-density lipoprotein 98.5 0.00032 1.1E-08 59.7 30.2 175 75-254 95-277 (386)
275 3m0c_C LDL receptor, low-densi 98.5 0.00078 2.7E-08 62.5 31.8 227 20-256 397-634 (791)
276 3v64_C Agrin; beta propeller, 98.5 0.00037 1.3E-08 58.3 30.0 176 75-255 52-235 (349)
277 1bpo_A Protein (clathrin); cla 98.5 0.00047 1.6E-08 58.0 33.7 258 27-338 48-331 (494)
278 3qqz_A Putative uncharacterize 98.5 0.00029 1E-08 55.6 27.7 197 48-251 24-250 (255)
279 4hw6_A Hypothetical protein, I 98.4 0.0006 2.1E-08 58.8 27.6 236 8-253 140-432 (433)
280 3tc9_A Hypothetical hydrolase; 98.4 0.00075 2.6E-08 58.2 27.9 147 54-209 140-300 (430)
281 3p5b_L Low density lipoprotein 98.4 0.00086 2.9E-08 57.3 28.9 206 6-219 111-329 (400)
282 3v9f_A Two-component system se 98.3 0.0019 6.5E-08 60.5 34.1 237 6-256 312-570 (781)
283 2xzh_A Clathrin heavy chain 1; 98.3 0.00066 2.2E-08 54.9 28.9 230 11-256 71-334 (365)
284 4a0p_A LRP6, LRP-6, low-densit 98.3 0.0016 5.4E-08 59.0 31.1 227 19-256 7-239 (628)
285 3qqz_A Putative uncharacterize 98.3 0.00064 2.2E-08 53.6 24.6 191 7-208 27-251 (255)
286 3sov_A LRP-6, low-density lipo 98.3 0.00095 3.3E-08 55.0 24.9 201 8-218 36-246 (318)
287 1k3i_A Galactose oxidase precu 98.3 0.00032 1.1E-08 64.3 23.1 229 9-243 245-530 (656)
288 3amr_A 3-phytase; beta-propell 98.3 0.0011 3.8E-08 54.5 24.3 175 74-253 48-262 (355)
289 2xe4_A Oligopeptidase B; hydro 98.2 0.00013 4.5E-09 67.8 19.6 198 52-252 175-396 (751)
290 1bpo_A Protein (clathrin); cla 98.2 0.0021 7.1E-08 54.2 28.7 230 11-256 70-333 (494)
291 1n7d_A LDL receptor, low-densi 98.2 2.4E-05 8.1E-10 71.9 13.4 226 21-256 380-616 (699)
292 4hw6_A Hypothetical protein, I 98.2 0.00051 1.7E-08 59.3 20.5 153 97-254 140-304 (433)
293 3m0c_C LDL receptor, low-densi 98.1 0.0048 1.6E-07 57.3 27.7 203 7-218 424-640 (791)
294 3kya_A Putative phosphatase; s 98.1 0.0033 1.1E-07 54.6 27.0 244 8-256 140-477 (496)
295 3pbp_A Nucleoporin NUP82; beta 98.1 0.00057 2E-08 57.4 19.4 155 141-333 27-207 (452)
296 1n7d_A LDL receptor, low-densi 98.1 4.8E-05 1.6E-09 69.9 13.9 202 7-219 406-623 (699)
297 2xbg_A YCF48-like protein; pho 98.0 0.0036 1.2E-07 51.8 32.4 234 5-256 34-280 (327)
298 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0081 2.8E-07 54.4 27.0 200 7-217 37-244 (628)
299 3s94_A LRP-6, low-density lipo 98.0 0.0093 3.2E-07 54.0 25.6 228 19-256 10-245 (619)
300 3amr_A 3-phytase; beta-propell 97.9 0.0071 2.4E-07 49.8 21.3 133 112-253 48-207 (355)
301 1xi4_A Clathrin heavy chain; a 97.6 0.0085 2.9E-07 58.3 20.3 220 27-258 48-293 (1630)
302 2p9w_A MAL S 1 allergenic prot 97.6 0.0096 3.3E-07 48.6 17.2 160 138-337 16-214 (334)
303 3sre_A PON1, serum paraoxonase 97.6 0.026 8.8E-07 47.0 22.0 203 9-218 52-308 (355)
304 3kya_A Putative phosphatase; s 97.4 0.018 6.2E-07 50.1 18.4 155 97-254 140-341 (496)
305 1xi4_A Clathrin heavy chain; a 97.4 0.01 3.5E-07 57.7 17.5 231 12-256 71-333 (1630)
306 2p9w_A MAL S 1 allergenic prot 97.4 0.04 1.4E-06 45.0 22.2 151 54-211 16-216 (334)
307 2ism_A Putative oxidoreductase 97.3 0.064 2.2E-06 44.8 25.9 225 8-242 32-333 (352)
308 3s25_A Hypothetical 7-bladed b 97.3 0.056 1.9E-06 44.0 23.3 175 60-256 23-218 (302)
309 3s94_A LRP-6, low-density lipo 97.1 0.17 5.7E-06 45.9 29.3 225 20-255 319-552 (619)
310 3a9g_A Putative uncharacterize 97.1 0.1 3.6E-06 43.5 27.4 229 7-242 29-330 (354)
311 3pbp_A Nucleoporin NUP82; beta 97.1 0.061 2.1E-06 45.4 16.8 133 112-250 39-208 (452)
312 2xbg_A YCF48-like protein; pho 97.1 0.099 3.4E-06 43.1 22.6 189 5-207 120-319 (327)
313 2be1_A Serine/threonine-protei 96.8 0.041 1.4E-06 45.3 14.0 109 20-132 12-139 (339)
314 3ott_A Two-component system se 96.7 0.41 1.4E-05 44.6 31.1 228 6-256 21-262 (758)
315 3ei3_A DNA damage-binding prot 96.3 0.88 3E-05 44.5 33.5 172 76-255 807-1000(1158)
316 2ism_A Putative oxidoreductase 96.1 0.47 1.6E-05 39.5 26.6 94 52-153 32-152 (352)
317 3sre_A PON1, serum paraoxonase 96.0 0.55 1.9E-05 39.0 23.7 136 112-254 81-252 (355)
318 3das_A Putative oxidoreductase 96.0 0.52 1.8E-05 39.0 15.8 158 95-256 31-235 (347)
319 2be1_A Serine/threonine-protei 95.9 0.29 9.9E-06 40.3 13.9 110 106-220 10-140 (339)
320 1tl2_A L10, protein (tachylect 95.8 0.04 1.4E-06 41.9 7.5 68 179-252 41-114 (236)
321 3ei3_A DNA damage-binding prot 95.7 1.8 6.2E-05 42.4 36.7 220 7-244 514-757 (1158)
322 2vpj_A Kelch-like protein 12; 95.6 0.68 2.3E-05 37.3 25.6 230 16-256 13-280 (301)
323 3s25_A Hypothetical 7-bladed b 95.6 0.71 2.4E-05 37.4 26.8 211 14-254 21-255 (302)
324 3ott_A Two-component system se 95.5 1.6 5.4E-05 40.6 31.4 236 6-256 323-588 (758)
325 1cru_A Protein (soluble quinop 95.3 0.65 2.2E-05 40.2 14.7 55 179-234 27-87 (454)
326 2xn4_A Kelch-like protein 2; s 95.3 0.91 3.1E-05 36.6 24.2 229 17-256 15-278 (302)
327 1zgk_A Kelch-like ECH-associat 94.7 1.4 4.7E-05 35.7 23.4 230 15-256 22-289 (308)
328 2g8s_A Glucose/sorbosone dehyd 94.6 1.7 5.8E-05 36.1 25.9 238 8-253 19-351 (353)
329 1tl2_A L10, protein (tachylect 94.5 1.1 3.9E-05 34.2 12.1 148 96-256 41-210 (236)
330 2vpj_A Kelch-like protein 12; 94.5 1.5 5.1E-05 35.2 23.8 174 75-256 30-233 (301)
331 3sbq_A Nitrous-oxide reductase 94.0 1.6 5.6E-05 38.4 13.4 99 7-111 323-450 (638)
332 2uvk_A YJHT; unknown function, 93.7 2.6 8.9E-05 34.8 20.3 22 62-85 19-40 (357)
333 3ii7_A Kelch-like protein 7; p 93.5 2.4 8.3E-05 34.1 25.7 187 63-256 12-227 (306)
334 3das_A Putative oxidoreductase 93.5 2.8 9.6E-05 34.6 27.9 227 7-242 32-326 (347)
335 1zgk_A Kelch-like ECH-associat 93.4 2.6 8.8E-05 34.0 22.7 175 75-256 38-242 (308)
336 3ii7_A Kelch-like protein 7; p 93.4 2.6 8.8E-05 34.0 25.1 229 18-256 12-274 (306)
337 3sbq_A Nitrous-oxide reductase 92.5 5.3 0.00018 35.3 22.5 73 179-255 323-409 (638)
338 3a9g_A Putative uncharacterize 92.1 4.5 0.00015 33.6 29.5 192 52-254 30-296 (354)
339 2uvk_A YJHT; unknown function, 91.6 5 0.00017 33.1 24.0 50 203-256 287-344 (357)
340 4asc_A Kelch repeat and BTB do 91.5 4.7 0.00016 32.6 23.1 66 188-256 147-223 (315)
341 2g8s_A Glucose/sorbosone dehyd 91.3 5.6 0.00019 32.9 26.6 96 52-153 19-147 (353)
342 2xn4_A Kelch-like protein 2; s 89.8 6.6 0.00023 31.4 24.2 175 76-256 30-231 (302)
343 2wg3_C Hedgehog-interacting pr 89.3 10 0.00035 32.8 13.6 55 179-234 14-79 (463)
344 4asc_A Kelch repeat and BTB do 88.1 9.2 0.00031 30.8 25.5 226 21-256 8-279 (315)
345 4gq2_M Nucleoporin NUP120; bet 83.6 7.6 0.00026 37.2 10.4 40 6-45 235-275 (950)
346 2woz_A Kelch repeat and BTB do 82.2 18 0.00062 29.1 22.1 66 188-256 157-233 (318)
347 3zwu_A Alkaline phosphatase PH 80.9 7.1 0.00024 34.9 8.5 58 182-241 479-548 (592)
348 4gq2_M Nucleoporin NUP120; bet 80.6 9 0.00031 36.7 9.7 38 180-218 237-274 (950)
349 3q6k_A 43.2 kDa salivary prote 80.4 25 0.00084 29.5 22.1 164 76-242 123-342 (381)
350 2wg3_C Hedgehog-interacting pr 80.3 28 0.00096 30.1 15.0 105 137-244 16-159 (463)
351 2zwa_A Leucine carboxyl methyl 78.6 40 0.0014 30.9 22.5 197 16-214 396-639 (695)
352 3qhy_B Beta-lactamase inhibito 77.7 25 0.00084 27.9 15.7 221 8-256 25-248 (282)
353 4a9v_A PHOX; hydrolase, beta-p 76.5 15 0.0005 32.7 8.9 61 180-242 477-549 (592)
354 3b7f_A Glycosyl hydrolase, BNR 74.3 37 0.0013 28.3 25.9 59 180-241 233-296 (394)
355 1cru_A Protein (soluble quinop 73.1 45 0.0015 28.7 28.1 40 308-349 405-451 (454)
356 3no0_A DNA gyrase subunit A; D 72.6 34 0.0012 27.1 14.7 74 178-255 67-147 (276)
357 3uc1_A DNA gyrase subunit A; D 71.2 41 0.0014 27.4 11.9 113 188-337 107-227 (327)
358 3f7f_A Nucleoporin NUP120; nuc 63.3 60 0.0021 29.8 10.1 32 59-94 228-259 (729)
359 2zwa_A Leucine carboxyl methyl 63.2 92 0.0031 28.6 22.0 192 62-256 397-637 (695)
360 3kci_A Probable E3 ubiquitin-p 62.5 68 0.0023 26.8 27.5 188 56-255 56-294 (389)
361 4gz8_A Semaphorin-3A; multi-do 62.4 32 0.0011 31.3 8.3 58 192-249 431-495 (667)
362 2woz_A Kelch repeat and BTB do 61.2 61 0.0021 25.9 25.4 228 19-256 17-289 (318)
363 4fhn_B Nucleoporin NUP120; pro 60.6 8.6 0.00029 37.7 4.7 38 180-218 239-276 (1139)
364 3zwu_A Alkaline phosphatase PH 58.0 65 0.0022 28.9 9.3 18 308-325 531-548 (592)
365 1q47_A Semaphorin 3A; beta pro 56.4 30 0.001 30.2 6.9 69 181-249 406-487 (495)
366 3q6k_A 43.2 kDa salivary prote 55.6 91 0.0031 26.1 20.1 74 179-254 220-306 (381)
367 3f7f_A Nucleoporin NUP120; nuc 51.7 19 0.00065 33.0 4.9 67 188-256 229-307 (729)
368 4fhn_B Nucleoporin NUP120; pro 49.6 16 0.00055 35.9 4.6 40 6-45 237-277 (1139)
369 3al9_A Plexin-A2; beta-propell 46.1 68 0.0023 28.4 7.6 69 180-249 401-476 (539)
370 4hvt_A Ritya.17583.B, post-pro 43.9 2E+02 0.0067 26.5 27.2 192 58-255 137-382 (711)
371 4d9s_A UVB-resistance protein 42.0 1.5E+02 0.0053 24.8 32.5 151 96-256 121-307 (406)
372 4a9v_A PHOX; hydrolase, beta-p 38.7 98 0.0034 27.6 7.2 57 97-153 477-549 (592)
373 3nvq_A Semaphorin-7A; beta-pro 37.4 1.2E+02 0.0041 27.2 7.7 58 192-249 382-444 (590)
374 3kvp_A Uncharacterized protein 35.6 68 0.0023 18.8 4.7 29 318-348 28-56 (72)
375 3kci_A Probable E3 ubiquitin-p 32.6 2.1E+02 0.0073 23.7 26.7 192 52-256 106-347 (389)
376 1olz_A Semaphorin 4D; developm 31.1 2.3E+02 0.0077 25.9 8.6 69 181-249 399-477 (663)
377 4hvt_A Ritya.17583.B, post-pro 29.9 3.3E+02 0.011 25.1 21.3 235 10-253 132-429 (711)
378 1suu_A DNA gyrase subunit A; t 26.7 2.5E+02 0.0085 22.5 20.6 76 178-255 150-232 (312)
379 3qhy_B Beta-lactamase inhibito 23.9 2.6E+02 0.009 21.9 16.3 180 8-210 64-246 (282)
380 1zvt_A Topoisomerase IV subuni 22.9 2.7E+02 0.0091 21.6 9.9 32 224-255 84-115 (256)
381 3b7f_A Glycosyl hydrolase, BNR 22.7 3.2E+02 0.011 22.5 23.6 22 6-27 54-77 (394)
382 3oky_A Plexin-A2; transmembran 22.5 2.5E+02 0.0084 25.8 7.2 68 181-249 401-475 (681)
383 3oky_B Putative uncharacterize 21.2 4.3E+02 0.015 23.5 8.2 70 180-249 404-495 (565)
384 3dgp_A RNA polymerase II trans 20.8 3.3 0.00011 25.5 -3.5 11 246-256 7-17 (80)
385 2zux_A YESW protein; beta-prop 20.5 4.6E+02 0.016 23.4 22.4 151 77-235 230-425 (591)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.5e-47 Score=318.75 Aligned_cols=282 Identities=16% Similarity=0.211 Sum_probs=247.7
Q ss_pred CCCCCceEEEEEccC----CCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCe
Q 018248 3 QPDPITIHHLALNQD----HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNK 77 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~----g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~ 77 (359)
+.|.+.|++++|+|+ +.+|++|+ |+.|+||++...+......+. +|...|..++++++...++.++ .|+.
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~-gh~~~v~~~~~~~~~~~l~s~s----~D~~ 103 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLE-GHQLGVVSVDISHTLPIAASSS----LDAH 103 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECSSSSEEEEEE----TTSE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeec-cCCCCEEEEEECCCCCEEEEEe----CCCc
Confidence 579999999999985 67899999 999999999876555555666 9999999999999888887777 7999
Q ss_pred EEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEe
Q 018248 78 VMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 78 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
|++||+.+++.+..+. +...+.+++|+|++.+++ .++.|++|++++++....+..+...+..++|+|+++. +++
T Consensus 104 i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~--las 181 (321)
T 3ow8_A 104 IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY--LAS 181 (321)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE--EEE
T ss_pred EEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE--EEE
Confidence 9999999999998887 788899999999999888 7899999999999998888888888999999998875 665
Q ss_pred cCCCCeeEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEec
Q 018248 154 PGLLKGQVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFS 232 (359)
Q Consensus 154 ~g~~d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 232 (359)
|+.|+.|++|+.. ++.+..+.+|..+|.+++|+|++++|++++.|+. |++||+++++.+..+.. |...|.+++|+
T Consensus 182 -g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~~~~s 257 (321)
T 3ow8_A 182 -GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-IKIYDVQHANLAGTLSG--HASWVLNVAFC 257 (321)
T ss_dssp -EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC-EEEEETTTCCEEEEECC--CSSCEEEEEEC
T ss_pred -EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe-EEEEECCCcceeEEEcC--CCCceEEEEEC
Confidence 6679999998875 4677888999999999999999999999999999 99999999999988887 77899999999
Q ss_pred CCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEE
Q 018248 233 SNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYL 312 (359)
Q Consensus 233 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (359)
|++++|++++.|++|+|||+.+++.. ..+..+.+.|..
T Consensus 258 p~~~~l~s~s~D~~v~iwd~~~~~~~------------------------------------------~~~~~h~~~v~~ 295 (321)
T 3ow8_A 258 PDDTHFVSSSSDKSVKVWDVGTRTCV------------------------------------------HTFFDHQDQVWG 295 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEE------------------------------------------EEECCCSSCEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCEEE------------------------------------------EEEcCCCCcEEE
Confidence 99999999999999999999876511 113345678999
Q ss_pred eeecccCCEEEEEecCCeEEEEEeC
Q 018248 313 VGFGRQNNTIVIVGLDGSYYKCEFD 337 (359)
Q Consensus 313 ~~~s~~~~~l~~~~~dg~i~v~~~~ 337 (359)
++|+|+++.|++++.||.|++|+++
T Consensus 296 v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 296 VKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999874
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-46 Score=324.15 Aligned_cols=278 Identities=13% Similarity=0.175 Sum_probs=247.4
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|..+|++++|+|++.+|++|+ |+.|+|||+++++.. ..+. +|...|..++|+++++.++.++ .|++|++||
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~--~~l~-~h~~~V~~v~~~~~~~~l~sgs----~D~~i~iwd 178 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLK-GHTDSVQDISFDHSGKLLASCS----ADMTIKLWD 178 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC--EEEC-CCSSCEEEEEECTTSSEEEEEE----TTSCCCEEE
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE--EEEe-ccCCcEEEEEEcCCCCEEEEEe----CCCeEEEEe
Confidence 4889999999999999999999 999999999987655 4454 8999999999999999888777 789999999
Q ss_pred CCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLK 158 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 158 (359)
+.+++++..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+..+.+++++.. +++ |+.|
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~--l~s-~s~D 255 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL--IAS-CSND 255 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSE--EEE-EETT
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCE--EEE-EcCC
Confidence 99999999988 999999999999998777 8999999999999999999999999999999888764 565 6679
Q ss_pred eeEEEEecCC-eeeEEeecccccccEEEEccC--------------------CcEEEEEeCCCCeEEEEEcCCCcEEEEe
Q 018248 159 GQVRVEDYGT-KKSKYITAHASRIASIAMTLD--------------------GRFVATASSKGTLIRVFNTMDGSLLQEM 217 (359)
Q Consensus 159 ~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~--------------------~~~l~~~~~dg~~i~iwd~~~~~~~~~~ 217 (359)
+.|++|+... .....+..|...|.+++|+|+ +.+|++|+.|+. |++||+++++++..+
T Consensus 256 ~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~-i~iwd~~~~~~~~~~ 334 (410)
T 1vyh_C 256 QTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVSTGMCLMTL 334 (410)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE-EEEEETTTTEEEEEE
T ss_pred CeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe-EEEEECCCCceEEEE
Confidence 9999998765 566778899999999999996 678999999999 999999999999999
Q ss_pred ecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecc
Q 018248 218 RRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSK 297 (359)
Q Consensus 218 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (359)
.+ |...|.+++|+|++++|++++.||.|++||+.+++..
T Consensus 335 ~~--h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~--------------------------------------- 373 (410)
T 1vyh_C 335 VG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM--------------------------------------- 373 (410)
T ss_dssp EC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC---------------------------------------
T ss_pred EC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE---------------------------------------
Confidence 87 7789999999999999999999999999999876522
Q ss_pred cceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEe
Q 018248 298 WSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 298 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~ 336 (359)
..+..|.+.|.+++|+|++++|++|+.||.|++|++
T Consensus 374 ---~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 374 ---KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ---EEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred ---EEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 124456778999999999999999999999999975
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.5e-45 Score=308.89 Aligned_cols=279 Identities=13% Similarity=0.103 Sum_probs=242.6
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++|+||+++|++|+ |+.|++||..+++.... +. .|...+..++++++++.++.++ .|+.|++|+
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~--~~-~~~~~v~~~~~s~~~~~l~s~~----~d~~v~iw~ 125 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHA--IP-LRSSWVMTCAYAPSGNYVACGG----LDNICSIYN 125 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE--EE-CSSSCEEEEEECTTSSEEEEEE----TTCEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceE--ee-cCCccEEEEEECCCCCEEEEEe----CCCeEEEEE
Confidence 5899999999999999999999 99999999988766533 33 6889999999999999888877 789999999
Q ss_pred CCCcc----EEeeec-cCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecC
Q 018248 83 DHENR----YLGELS-FRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 83 ~~~~~----~~~~~~-~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 155 (359)
+.+++ ....+. |...|.++.|++++.++. .|+.|++||+++++.+..+..|...+..++|+|++.. +++ |
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~s-g 202 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL--FVS-G 202 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE--EEE-E
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCE--EEE-E
Confidence 88753 444555 889999999999998766 8999999999999999999999999999999998764 555 6
Q ss_pred CCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCC
Q 018248 156 LLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSN 234 (359)
Q Consensus 156 ~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 234 (359)
+.|+.|++|+... .....+.+|...|.+++|+|++++|++++.|+. |++||+++++.+..+....+...|.+++|+|+
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT-CRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred eCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc-EEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 6899999998754 667788999999999999999999999999999 99999999998887764334458999999999
Q ss_pred CCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEee
Q 018248 235 AQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVG 314 (359)
Q Consensus 235 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 314 (359)
|++|++|+.||.|++||+.+++.. ..+..|.+.|.+++
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~------------------------------------------~~~~~h~~~v~~~~ 319 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRA------------------------------------------GVLAGHDNRVSCLG 319 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEE------------------------------------------EEEECCSSCEEEEE
T ss_pred CCEEEEECCCCeEEEEEcccCcEe------------------------------------------eEeecCCCcEEEEE
Confidence 999999999999999999876511 12445678899999
Q ss_pred ecccCCEEEEEecCCeEEEEE
Q 018248 315 FGRQNNTIVIVGLDGSYYKCE 335 (359)
Q Consensus 315 ~s~~~~~l~~~~~dg~i~v~~ 335 (359)
|+|++++|++|+.||.|++|+
T Consensus 320 ~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 320 VTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEEC
T ss_pred EcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999995
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.1e-44 Score=305.11 Aligned_cols=281 Identities=11% Similarity=0.042 Sum_probs=241.6
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|++++|+|++++|++|+ |+.|++||..+++...... .|...+..++++|++..++.++ .|+.+++|+
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~---~~~~~v~~~~~sp~g~~lasg~----~d~~i~v~~ 134 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT---MPCTWVMACAYAPSGCAIACGG----LDNKCSVYP 134 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CSSSCCCEEEECTTSSEEEEES----TTSEEEEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe---cCCCCEEEEEECCCCCEEEEee----CCCCEEEEE
Confidence 5899999999999999999999 9999999998776654333 5788899999999999888777 789999999
Q ss_pred CCCc------cEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEE
Q 018248 83 DHEN------RYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 83 ~~~~------~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (359)
+... .....+. |...|.+++|+|++..++ .|++|++||+++++.+..+.+|...+.+++++|+.+..+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 7643 2334444 889999999999987666 89999999999999999999999999999999876555577
Q ss_pred ecCCCCeeEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEe
Q 018248 153 CPGLLKGQVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAF 231 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 231 (359)
+ |+.|+.|++|+.+ ++.+..+..|...|.+++|+|++.+|++++.|+. |++||+++++.+..+..+.+...+.+++|
T Consensus 215 s-gs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 215 S-GGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT-CRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp E-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred E-EeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe-EEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 6 6689999999875 4667788999999999999999999999999999 99999999988877765444457899999
Q ss_pred cCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEE
Q 018248 232 SSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQY 311 (359)
Q Consensus 232 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (359)
+|++++|++++.|+.|++||+.+++.. ..+..|.+.|.
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~------------------------------------------~~l~~h~~~v~ 330 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRV------------------------------------------SILFGHENRVS 330 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEE------------------------------------------EEECCCSSCEE
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceE------------------------------------------EEEECCCCcEE
Confidence 999999999999999999999876511 11344678899
Q ss_pred EeeecccCCEEEEEecCCeEEEEE
Q 018248 312 LVGFGRQNNTIVIVGLDGSYYKCE 335 (359)
Q Consensus 312 ~~~~s~~~~~l~~~~~dg~i~v~~ 335 (359)
+++|+||+++|++|+.||.|++|+
T Consensus 331 ~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 331 TLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999994
No 5
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-44 Score=303.75 Aligned_cols=293 Identities=14% Similarity=0.188 Sum_probs=237.0
Q ss_pred CCCC-ceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 4 PDPI-TIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 4 ~h~~-~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
.|.. .|.+++|+|+|++||+|+ |+.|+||+++++.......+..+|...|..++|+++++.++.++ .|+.+++|
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s----~D~~v~iw 88 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS----FDATTCIW 88 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE----TTSCEEEE
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE----CCCcEEEE
Confidence 5666 999999999999999999 99999999987654433444348999999999999999988888 79999999
Q ss_pred ECCCc--cEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccc---eeeeeEeccCCCceeeeeecCCCccEEE
Q 018248 82 DDHEN--RYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDL---KLVDQIETVVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 82 d~~~~--~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (359)
|+.++ +.+..+. |...|.+++|+|++.+++ .|+.|++||+.++ +.+..+..|...+..++|+|+++. ++
T Consensus 89 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~--l~ 166 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL--LA 166 (345)
T ss_dssp EECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC--EE
T ss_pred EccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE--EE
Confidence 98776 4566676 899999999999998888 7999999999765 345667788889999999999875 55
Q ss_pred ecCCCCeeEEEEecCCe---eeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCC---------------cEE
Q 018248 153 CPGLLKGQVRVEDYGTK---KSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDG---------------SLL 214 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~---------------~~~ 214 (359)
+ ++.|+.|++|+.... ....+.+|...|.+++|+|+|++|++++.|+. |++||.... +++
T Consensus 167 s-~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 167 S-ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp E-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred E-EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccccCCCCccceeeccCCcccee
Confidence 5 667999999887653 34678899999999999999999999999999 999996432 233
Q ss_pred EEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEE
Q 018248 215 QEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYF 294 (359)
Q Consensus 215 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (359)
..+.. .|...|.+++|+|++..|++++.|+.|++|+........ ...+.+..
T Consensus 245 ~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~--------------------~~~~~~~~------- 296 (345)
T 3fm0_A 245 CTLSG-FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQ--------------------QPTFSLTA------- 296 (345)
T ss_dssp EEECS-SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTT--------------------SCCEEEEE-------
T ss_pred EEecC-CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcc--------------------eeeEEEEe-------
Confidence 34443 367899999999999999999999999999998754211 00000000
Q ss_pred ecccceeEEeecCCcEEEeeecccC-CEEEEEecCCeEEEEEeCC
Q 018248 295 SSKWSMAQFRLPENVQYLVGFGRQN-NTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 295 ~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~v~~~~~ 338 (359)
.....|.+.|++++|+|++ ..|++|+.||.|++|++..
T Consensus 297 ------~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 297 ------HLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp ------EETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred ------eecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 0012456789999999987 5999999999999999976
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.5e-44 Score=305.06 Aligned_cols=280 Identities=13% Similarity=0.111 Sum_probs=224.0
Q ss_pred CCCceEEEEEccCCCEEEEecCCceEEEEcCC----------CcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCC
Q 018248 5 DPITIHHLALNQDHGCFATGTETGFRVYLSDP----------YKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQ 74 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~----------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 74 (359)
|...|.+++|+|||++|++++|+++++||... ........+ .|...|..++|++++ .++.++ .
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~d~-~l~~~s----~ 101 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGV--QTEAGVADLTWVGER-GILVAS----D 101 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEE--EESSCEEEEEEETTT-EEEEEE----T
T ss_pred ccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeee--ccCCCEEEEEEeCCC-eEEEEE----C
Confidence 56789999999999999998888888887421 111111112 346779999998874 555555 6
Q ss_pred CCeEEEEECCCccEEeee-----ccCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCC
Q 018248 75 SNKVMIWDDHENRYLGEL-----SFRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNA 146 (359)
Q Consensus 75 d~~i~iwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (359)
||.|++||+.+++.+..+ .|...|.+++|+|++++++ .|++|++||+++++.+..+.+|...+..++|++++
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~ 181 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHK 181 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSC
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCC
Confidence 899999999988755433 3889999999999999888 79999999999999999999999999999999998
Q ss_pred CccEEEecCCCCeeEEEEecCC-eeeEEe--ecccccccEEEEccC-CcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCC
Q 018248 147 GPMVMACPGLLKGQVRVEDYGT-KKSKYI--TAHASRIASIAMTLD-GRFVATASSKGTLIRVFNTMDGSLLQEMRRGAE 222 (359)
Q Consensus 147 ~~~~l~~~g~~d~~v~~~~~~~-~~~~~~--~~~~~~i~~~~~s~~-~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~ 222 (359)
... +++ ++.|+.|++|+.+. +....+ ..+...+.+++|+|+ +++|++|+.|+. |++||+++++++..+.. |
T Consensus 182 ~~~-l~s-~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~-v~~wd~~~~~~~~~~~~--h 256 (344)
T 4gqb_B 182 DSV-FLS-CSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT-VSLVDTKSTSCVLSSAV--H 256 (344)
T ss_dssp TTE-EEE-EETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE-EEEEESCC--CCEEEEC--C
T ss_pred CCc-eee-eccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc-EEEEECCCCcEEEEEcC--C
Confidence 763 343 66899999998765 445554 345567899999985 568999999999 99999999999999987 7
Q ss_pred CcceEEEEecCCC-CEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEeccccee
Q 018248 223 RAEIYSLAFSSNA-QWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMA 301 (359)
Q Consensus 223 ~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
...|++++|+|++ ++|++++.|++|+|||+++++. .
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-------------------------------------------~ 293 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-------------------------------------------F 293 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-------------------------------------------E
T ss_pred CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-------------------------------------------E
Confidence 7899999999998 5799999999999999987641 0
Q ss_pred EEeecCCcEEEeeecccCC-EEEEEecCCeEEEEEeCCC
Q 018248 302 QFRLPENVQYLVGFGRQNN-TIVIVGLDGSYYKCEFDPM 339 (359)
Q Consensus 302 ~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~v~~~~~~ 339 (359)
.+..|.+.|++++|+|+++ .|++++.||+|++|+++.+
T Consensus 294 ~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 294 RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 1334678899999999986 5678999999999999763
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.6e-43 Score=295.33 Aligned_cols=290 Identities=14% Similarity=0.195 Sum_probs=238.2
Q ss_pred CCCCCceEEEEEccCC-CEEEEec-CCceEEEEcCCCcce---eeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCe
Q 018248 3 QPDPITIHHLALNQDH-GCFATGT-ETGFRVYLSDPYKPI---MRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNK 77 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g-~~l~~~~-d~~i~iw~~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~ 77 (359)
..|.++|.+++|+|++ ++|++|+ |+.|++|++...... ....+. +|...|..++++++++.++.++ .|++
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s----~D~~ 88 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK-GHSHIVQDCTLTADGAYALSAS----WDKT 88 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEE----TTSE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe-CCcccEEEEEECCCCCEEEEEe----CCCE
Confidence 3699999999999965 8999999 999999998743322 234455 8999999999999999988888 7999
Q ss_pred EEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCC----cc
Q 018248 78 VMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAG----PM 149 (359)
Q Consensus 78 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 149 (359)
|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||++ ++.+..+..|...+..+.+.|... ..
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CC
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCcc
Confidence 9999999999999888 999999999999998887 89999999995 566778888888899999988643 33
Q ss_pred EEEecCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEE
Q 018248 150 VMACPGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYS 228 (359)
Q Consensus 150 ~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~ 228 (359)
.+++ ++.|+.|++|+... +....+.+|...|.+++|+|++++|++++.|+. |++||+.+++.+..+.. ...|.+
T Consensus 168 ~l~s-~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~-i~iwd~~~~~~~~~~~~---~~~v~~ 242 (319)
T 3frx_A 168 TIIS-AGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE-IMLWNLAAKKAMYTLSA---QDEVFS 242 (319)
T ss_dssp EEEE-EETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEEC---CSCEEE
T ss_pred EEEE-EeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEecC---CCcEEE
Confidence 4665 66899999999875 556678899999999999999999999999999 99999999999988874 368999
Q ss_pred EEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCC
Q 018248 229 LAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPEN 308 (359)
Q Consensus 229 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (359)
++|+|++.+|++++.++ +++|+++..... ..+.... ......+..
T Consensus 243 ~~~sp~~~~la~~~~~~-i~v~~~~~~~~~---------------------------------~~~~~~~-~~~~~~~~~ 287 (319)
T 3frx_A 243 LAFSPNRYWLAAATATG-IKVFSLDPQYLV---------------------------------DDLRPEF-AGYSKAAEP 287 (319)
T ss_dssp EEECSSSSEEEEEETTE-EEEEEETTEEEE---------------------------------EEECCCC-TTCCGGGCC
T ss_pred EEEcCCCCEEEEEcCCC-cEEEEeCcCeee---------------------------------eccCccc-cccccCcCc
Confidence 99999999999887654 999999865310 0000000 000112335
Q ss_pred cEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 309 VQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 309 ~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
.+.+++|+|||++|++|+.||.|++|++..
T Consensus 288 ~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 288 HAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred ceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 678999999999999999999999999865
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.4e-43 Score=291.02 Aligned_cols=280 Identities=11% Similarity=0.142 Sum_probs=234.4
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|.+.|.+++|+|++++|++|+ |+.|++||++++... ..+. +|...+..++++++++.++.++ .|+.|++||
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~s~s----~d~~i~vwd 83 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEV--RSIQ-VTETPVRAGKFIARKNWIIVGS----DDFRIRVFN 83 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEEEGGGTEEEEEE----TTSEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcee--EEee-ccCCcEEEEEEeCCCCEEEEEC----CCCEEEEEE
Confidence 4789999999999999999999 999999999986554 3444 7899999999999999988888 789999999
Q ss_pred CCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccc-eeeeeEeccCCCceeeeeecCCCccEEEecCCC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDL-KLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
+.+++.+..+. |...|.+++|+|++.+++ .|++|++||++++ .....+..|...+.+++|+|.+.. .+++ |+.
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l~s-gs~ 161 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-TFAS-GCL 161 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT-EEEE-EET
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC-EEEE-EeC
Confidence 99999999988 999999999999998887 8999999999876 556678889999999999995443 3555 668
Q ss_pred CeeEEEEecCC-eeeEEe-ecccccccEEEEcc--CCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecC
Q 018248 158 KGQVRVEDYGT-KKSKYI-TAHASRIASIAMTL--DGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSS 233 (359)
Q Consensus 158 d~~v~~~~~~~-~~~~~~-~~~~~~i~~~~~s~--~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 233 (359)
|+.|++|+... .....+ ..|...+..+.|+| ++++|++++.|+. |++||+++++++..+.+ |...|.+++|+|
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~~~~~~~~--h~~~v~~~~~~p 238 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEG--HMSNVSFAVFHP 238 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTEEEEEEEC--CSSCEEEEEECS
T ss_pred CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCccceeeCC--CCCCEEEEEECC
Confidence 99999999754 333333 45667899999987 7789999999999 99999999999999987 778999999999
Q ss_pred CCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEe
Q 018248 234 NAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLV 313 (359)
Q Consensus 234 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 313 (359)
++++|++++.||+|++||+++++.. ..+..+.+.+.++
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~------------------------------------------~~~~~~~~~~~~~ 276 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVE------------------------------------------KTLNVGLERSWCI 276 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEE------------------------------------------EEECCSSSSEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcee------------------------------------------eeccCCCccEEEE
Confidence 9999999999999999999887611 1133445678999
Q ss_pred eecccCC--EEEEEecCCeEEEEEeCC
Q 018248 314 GFGRQNN--TIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 314 ~~s~~~~--~l~~~~~dg~i~v~~~~~ 338 (359)
+|+|+++ ++++|+.|| +.+|.+..
T Consensus 277 ~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 277 ATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EECCCCCceEEEEecCCc-eEEEEecc
Confidence 9999875 477776666 66776653
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.5e-44 Score=305.05 Aligned_cols=280 Identities=15% Similarity=0.156 Sum_probs=221.4
Q ss_pred CCCCceEEEEEccCCCEEEEec-------CCceEEEEcCCCcce---eeeecccCCCCceeEEEEeccCCEEEEEecCCC
Q 018248 4 PDPITIHHLALNQDHGCFATGT-------ETGFRVYLSDPYKPI---MRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH 73 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-------d~~i~iw~~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 73 (359)
.|...|.+++|||||++|++|+ |+.|++|+..++... ..... +|...|..++|++++. +++++
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~--~~~~~V~~~~~s~d~~-~l~~s---- 112 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGV--QTEAGVTDVAWVSEKG-ILVAS---- 112 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEE--ECSSCEEEEEEETTTE-EEEEE----
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccC--CCCCCEEEEEEcCCCC-EEEEE----
Confidence 3889999999999999999998 356888887654322 11222 6888999999998764 44445
Q ss_pred CCCeEEEEECCCccEEeee-----ccCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecC
Q 018248 74 QSNKVMIWDDHENRYLGEL-----SFRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQN 145 (359)
Q Consensus 74 ~d~~i~iwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (359)
.|+.|++||+.+++..... .|...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+..++|+++
T Consensus 113 ~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 113 DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccC
Confidence 5899999999888654332 3788999999999998887 7999999999999999999999999999999999
Q ss_pred CCccEEEecCCCCeeEEEEecCC-eeeEE--eecccccccEEEEccC-CcEEEEEeCCCCeEEEEEcCCCcEEEEeecCC
Q 018248 146 AGPMVMACPGLLKGQVRVEDYGT-KKSKY--ITAHASRIASIAMTLD-GRFVATASSKGTLIRVFNTMDGSLLQEMRRGA 221 (359)
Q Consensus 146 ~~~~~l~~~g~~d~~v~~~~~~~-~~~~~--~~~~~~~i~~~~~s~~-~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~ 221 (359)
++..++. ++.|+.|++|+.+. +.... ...|...+.+++|+|+ +.+|++|+.|+. |++||+++++.+..+..
T Consensus 193 ~~~~~~s--~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~-i~~wd~~~~~~~~~~~~-- 267 (357)
T 4g56_B 193 KDTIFLS--CGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGN-VSLVNIKNPDSAQTSAV-- 267 (357)
T ss_dssp CSSCEEE--EETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSC-EEEEESSCGGGCEEECC--
T ss_pred CCceeee--eccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccc-eeEEECCCCcEeEEEec--
Confidence 8764433 45799999998765 33333 3456778999999997 468999999999 99999999999988886
Q ss_pred CCcceEEEEecCCC-CEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccce
Q 018248 222 ERAEIYSLAFSSNA-QWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSM 300 (359)
Q Consensus 222 ~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (359)
|...|++++|+|++ ++|++++.|++|+|||+++++.. +
T Consensus 268 ~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~---------------------------------~-------- 306 (357)
T 4g56_B 268 HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF---------------------------------R-------- 306 (357)
T ss_dssp CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE---------------------------------E--------
T ss_pred cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe---------------------------------E--------
Confidence 77899999999987 57999999999999999876511 0
Q ss_pred eEEeecCCcEEEeeecc-cCCEEEEEecCCeEEEEEeCC
Q 018248 301 AQFRLPENVQYLVGFGR-QNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 301 ~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~v~~~~~ 338 (359)
...|.+.|++++|+| |+++|++++.||+|++|+++.
T Consensus 307 --~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 307 --DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp --ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred --ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 113567899999998 789999999999999999976
No 10
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1e-42 Score=295.93 Aligned_cols=307 Identities=27% Similarity=0.424 Sum_probs=247.3
Q ss_pred CCCCCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
..|...|.+++|+|||++|++|++..++||++++++......+ ..+..+++.++++.++++++ .|++|++||
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~d~~v~iWd 87 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM-----RHLSKVRMLHRTNYVAFVTG---VKEVVHIWD 87 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC-----SCCCEEEECTTSSEEEEECS---STTEEEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec-----CCeEEEEEcCCCCEEEEEEC---CccEEEEEE
Confidence 4689999999999999999999966789999997665544332 35788899999998887776 468999999
Q ss_pred CCCccEEeeeccCcceeEEEEecceeEEEecCeEEEEEcccc-eeeeeEeccCCCceeeeeecCCCccEEEec-CCCCee
Q 018248 83 DHENRYLGELSFRSEVKNVRLRRDRIVVVLNQKVYVYNFTDL-KLVDQIETVVNPTGLCDVSQNAGPMVMACP-GLLKGQ 160 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~d~~ 160 (359)
..+++.+..+.+...|.++.++++...++.++.|++||+.++ +.+..+.. +...+++++ . +++++ |..+|.
T Consensus 88 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~--~la~~sg~~~g~ 160 (355)
T 3vu4_A 88 DVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--G--LLVYSNEFNLGQ 160 (355)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--T--EEEEEESSCTTC
T ss_pred CCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--c--EEEEeCCCcCcE
Confidence 999999999998889999999999877779999999999887 77777665 445677777 2 35544 788999
Q ss_pred EEEEecCCee-----------------eEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCC
Q 018248 161 VRVEDYGTKK-----------------SKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAER 223 (359)
Q Consensus 161 v~~~~~~~~~-----------------~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~ 223 (359)
|++|+..... +..+.+|...|.+++|+|+|++|++|+.|++.|++||+++++.+..+..+.|.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 9999987643 77889999999999999999999999999933999999999999999844467
Q ss_pred cceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEE
Q 018248 224 AEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQF 303 (359)
Q Consensus 224 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (359)
..|.+++|+|++++|++++.|++|+|||++...... ...+.. .+++.++...|++..+
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~--------------------~~~~~~--~~~~~~~~~~~~~~~~ 298 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNK--------------------RHALKG--WINMKYFQSEWSLCNF 298 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCC--------------------SEETTT--TEECCCCCCSSCSEEE
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcc--------------------cccccc--eeeccccccccceeEE
Confidence 899999999999999999999999999998764221 000000 0345566677777777
Q ss_pred eecCCc---EEEeeecccCCEEEEEecCCeEEEEEeCCCCCCceEE
Q 018248 304 RLPENV---QYLVGFGRQNNTIVIVGLDGSYYKCEFDPMKGGEMHQ 346 (359)
Q Consensus 304 ~~~~~~---v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~ 346 (359)
.++... ...++|++|++.|++++.||.+++|++.....++...
T Consensus 299 ~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~~~~~ 344 (355)
T 3vu4_A 299 KLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEMERWL 344 (355)
T ss_dssp ECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTTTEEE
T ss_pred EeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCCceEE
Confidence 766533 4779999999999999999999999998765554443
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.4e-42 Score=290.98 Aligned_cols=294 Identities=12% Similarity=0.164 Sum_probs=232.2
Q ss_pred CCCCceEEEEE-----cc-CCCEEEEec-CCceEEEEcCCCcc-----eeeeecccCCCCceeEEEEeccCCEEEEEecC
Q 018248 4 PDPITIHHLAL-----NQ-DHGCFATGT-ETGFRVYLSDPYKP-----IMRRDFDRNPRGGTQLVSMLFRSNIICLVNSG 71 (359)
Q Consensus 4 ~h~~~v~~~~~-----s~-~g~~l~~~~-d~~i~iw~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 71 (359)
.|.+.|++++| ++ ++++|++|+ |+.|++|++...+. .....+. +|...|..+++++++..++.++
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~-~h~~~V~~~~~~~~~~~l~s~s-- 95 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT-GHNHFVSDLALSQENCFAISSS-- 95 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC-CCSSCEEEEEECSSTTEEEEEE--
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhc-cCCCceEEEEECCCCCEEEEEc--
Confidence 58999999999 77 999999999 99999999975431 2234454 8999999999999998888777
Q ss_pred CCCCCeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEe---ccCCCceeeeeec
Q 018248 72 PHQSNKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIE---TVVNPTGLCDVSQ 144 (359)
Q Consensus 72 ~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~ 144 (359)
.|++|++||+.+++.+..+. |...|.+++|+|++..++ .|+.|++||+.... ..... .|...+.+++++|
T Consensus 96 --~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 96 --WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp --TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECC
T ss_pred --CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeeecc
Confidence 79999999999999999887 999999999999998777 79999999996433 22222 5667788999998
Q ss_pred CCCc--------cEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCC-CcEEE
Q 018248 145 NAGP--------MVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMD-GSLLQ 215 (359)
Q Consensus 145 ~~~~--------~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~-~~~~~ 215 (359)
++.. .++++ ++.|+.|++|+.+......+.+|...|.+++|+|+|++|++|+.|+. |++||+.+ .....
T Consensus 173 ~~~~~~~~~~~~~~l~s-~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~-v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFAS-VGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKK-LLIWDILNLTYPQR 250 (343)
T ss_dssp CCCSCSCCCSSCCEEEE-EETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCE-EEEEESSCCSSCSE
T ss_pred ccccccccCCCCCEEEE-EcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCe-EEEEECCCCcccce
Confidence 7632 34665 66899999999888888889999999999999999999999999999 99999944 44444
Q ss_pred EeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEe
Q 018248 216 EMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFS 295 (359)
Q Consensus 216 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (359)
.+. +...|.+++|+|++++++++ .|+.|++|++.+++.... ..+ . . .
T Consensus 251 ~~~---~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~--------------------~~~---~---~---~ 297 (343)
T 2xzm_R 251 EFD---AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPV--------------------CTI---E---A---E 297 (343)
T ss_dssp EEE---CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSE--------------------EEC---C---C---C
T ss_pred eec---CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCce--------------------EEe---e---c---C
Confidence 443 33579999999999988755 577799999988653210 000 0 0 0
Q ss_pred cccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 296 SKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 296 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
..........+...+.+++|+|++++|++|+.||.|++|+++.
T Consensus 298 ~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 298 PITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp SGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred cchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 0000001123456789999999999999999999999999864
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.4e-43 Score=302.75 Aligned_cols=288 Identities=14% Similarity=0.132 Sum_probs=235.0
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
..|.++|++++|+|++++|++|+ |++|+|||+.+++... .+. +|...+..++++++++.++.++ .|+.+++|
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~--~~~-~h~~~v~~~~~s~~g~~las~~----~d~~v~iw 135 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTH--AIK-LHCPWVMECAFAPNGQSVACGG----LDSACSIF 135 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE--EEE-CCCTTCCCCEECTTSSEEEECC----SSSCCEEE
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccce--EEe-cCCCCEEEEEECCCCCEEEEee----CCCcEEEE
Confidence 36899999999999999999999 9999999998876553 343 7899999999999999887776 78999999
Q ss_pred ECCCcc-------EEeeec-cCcceeEEEEecce-e-EEE--ecCeEEEEEcccceeeeeE-----eccCCCceeeeeec
Q 018248 82 DDHENR-------YLGELS-FRSEVKNVRLRRDR-I-VVV--LNQKVYVYNFTDLKLVDQI-----ETVVNPTGLCDVSQ 144 (359)
Q Consensus 82 d~~~~~-------~~~~~~-~~~~v~~~~~~~~~-~-~~~--~d~~i~i~d~~~~~~~~~~-----~~~~~~~~~~~~~~ 144 (359)
|+.+.. ....+. |...|.++.|.|++ . ++. .|++|++||+.+++.+..+ ..|...+..+++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 986532 233444 88899999999964 3 333 8999999999999888777 45677778888876
Q ss_pred CCCccEEEecCCCCeeEEEEecC--CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCC
Q 018248 145 NAGPMVMACPGLLKGQVRVEDYG--TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAE 222 (359)
Q Consensus 145 ~~~~~~l~~~g~~d~~v~~~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~ 222 (359)
.... ++++ |+.|+.|++|+.+ ...+..+.+|...|.+++|+|++++|++|+.|+. |++||+++++.+..+..+..
T Consensus 216 ~~~~-~l~s-gs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-i~lwd~~~~~~~~~~~~~~~ 292 (380)
T 3iz6_a 216 LNAN-MFIS-GSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT-CRLFDMRTGHQLQVYNREPD 292 (380)
T ss_dssp SSCC-EEEE-EETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC-EEEEETTTTEEEEEECCCCS
T ss_pred CCCC-EEEE-EECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe-EEEEECCCCcEEEEeccccc
Confidence 4333 3554 6789999999975 3677888999999999999999999999999999 99999999999888765321
Q ss_pred -----CcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecc
Q 018248 223 -----RAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSK 297 (359)
Q Consensus 223 -----~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (359)
...|++++|+|+|++|++|+.||.|++||+..++.. ..+...
T Consensus 293 ~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~---------------------------------~~~~~~ 339 (380)
T 3iz6_a 293 RNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMV---------------------------------LNLGTL 339 (380)
T ss_dssp SSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEE---------------------------------EEECCS
T ss_pred ccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceE---------------------------------EEEecc
Confidence 234899999999999999999999999999876511 000000
Q ss_pred cceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 298 WSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 298 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
...|.+.|.+++|+||+++|++|+.||.|++|++..
T Consensus 340 -----~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 340 -----QNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp -----CSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred -----cCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 123567899999999999999999999999999864
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.3e-42 Score=312.53 Aligned_cols=246 Identities=15% Similarity=0.181 Sum_probs=207.9
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|++++|+|||++||+|+ |+.|+|||+.+++......+. +|.+.|..++|++++..++.++.+...++.|++||
T Consensus 57 ~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~-~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd 135 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIP-VFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD 135 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEE-CSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT
T ss_pred CCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeec-ccCCceEEEEECCCCCEEEEEECCCCceeEEEEee
Confidence 6899999999999999999999 999999999766555555555 89999999999999999888774321225788887
Q ss_pred CCCccEEeeec-cCcceeEEEEeccee-EEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDRI-VVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~~-~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
+++....+. |...|.+++|+|++. .++ .|++|++||..+++....+.+|...+..++|+|+++. +++ ++.
T Consensus 136 --~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~--las-~s~ 210 (611)
T 1nr0_A 136 --TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSL--FAS-TGG 210 (611)
T ss_dssp --TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSE--EEE-EET
T ss_pred --CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCE--EEE-EEC
Confidence 566666777 999999999999985 344 8999999999999999999999999999999998864 665 668
Q ss_pred CeeEEEEecC-CeeeEEee-------cccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec----------
Q 018248 158 KGQVRVEDYG-TKKSKYIT-------AHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR---------- 219 (359)
Q Consensus 158 d~~v~~~~~~-~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~---------- 219 (359)
|+.|++|+.. ++....+. +|...|.+++|+|++++|++++.|+. |++||+.+++.+..+..
T Consensus 211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~-v~lWd~~~~~~~~~~~~~~~~~~~~~~ 289 (611)
T 1nr0_A 211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT-IKIWNVATLKVEKTIPVGTRIEDQQLG 289 (611)
T ss_dssp TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEECCSSGGGCEEE
T ss_pred CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe-EEEEeCCCCceeeeecCCCCccceeEE
Confidence 9999999864 45556663 79999999999999999999999999 99999998876655431
Q ss_pred -------------------------------CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 220 -------------------------------GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 220 -------------------------------~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
..|...|++++|+|+|++|++++.|++|++||+.++.
T Consensus 290 ~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 290 IIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp EEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence 1267789999999999999999999999999998765
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-41 Score=283.29 Aligned_cols=282 Identities=12% Similarity=0.220 Sum_probs=238.3
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
..|...|.+++|+|++++|++|+ |+.|++|++.+++.. ..+. +|...+..++|+++++.++.++ .|+.|++|
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~~----~d~~i~vw 92 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTIS-GHKLGISDVAWSSDSNLLVSAS----DDKTLKIW 92 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEEC-CCSSCEEEEEECTTSSEEEEEE----TTSEEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccc--hhhc-cCCCceEEEEEcCCCCEEEEEC----CCCEEEEE
Confidence 36899999999999999999999 999999999876554 3444 7999999999999999888887 78999999
Q ss_pred ECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCC
Q 018248 82 DDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 82 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
|+.+++.+..+. |...|.++.|+|++.+++ .|+.|++||+++++.+..+..|..++..++|+|++.. +++ ++.
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~-~~~ 169 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL--IVS-SSY 169 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE--EEE-EET
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCE--EEE-EeC
Confidence 999999999888 899999999999998887 7999999999999999999989999999999998764 555 567
Q ss_pred CeeEEEEecCC-eeeEEe-ecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEe-cCC
Q 018248 158 KGQVRVEDYGT-KKSKYI-TAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAF-SSN 234 (359)
Q Consensus 158 d~~v~~~~~~~-~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~-s~~ 234 (359)
|+.|++|+... +.+..+ ..+...+..++|+|++++|++++.|+. |++||+++++.+..+..+..........+ .++
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 248 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE-EEEEETTTTEEEEEECSSCCSSSCCCEEEECSS
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe-EEEEECCCCcEEEEEEecCCceEEEEEEEEeCC
Confidence 99999998865 444444 456678999999999999999999999 99999999999988876433222223334 467
Q ss_pred CCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEee
Q 018248 235 AQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVG 314 (359)
Q Consensus 235 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 314 (359)
+++|++++.||.|++||+.+++.. ..++.|.+.|..++
T Consensus 249 ~~~l~sg~~dg~i~vwd~~~~~~~------------------------------------------~~~~~h~~~v~~~~ 286 (312)
T 4ery_A 249 GKWIVSGSEDNLVYIWNLQTKEIV------------------------------------------QKLQGHTDVVISTA 286 (312)
T ss_dssp SCEEEECCTTSCEEEEETTTCCEE------------------------------------------EEECCCSSCEEEEE
T ss_pred CcEEEEECCCCEEEEEECCCchhh------------------------------------------hhhhccCCcEEEEe
Confidence 899999999999999999886511 12445667899999
Q ss_pred ecccCCEEEEEe--cCCeEEEEEeC
Q 018248 315 FGRQNNTIVIVG--LDGSYYKCEFD 337 (359)
Q Consensus 315 ~s~~~~~l~~~~--~dg~i~v~~~~ 337 (359)
|+|+++.|++++ .||.|++|+.+
T Consensus 287 ~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 287 CHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ECSSSSEEEEEECTTTCCEEEEECC
T ss_pred ecCcCCceEEEEccCCccEEEecCC
Confidence 999999999987 59999999865
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-41 Score=291.57 Aligned_cols=282 Identities=16% Similarity=0.160 Sum_probs=229.4
Q ss_pred CCCCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeeccc---------------CCCCceeEEEEeccCCEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDR---------------NPRGGTQLVSMLFRSNIICLV 68 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~---------------~h~~~v~~~~~~~~~~~~~~~ 68 (359)
.|...|.+++|+|||++||+|+++.+++|++.+++......... .+...|..++|+++++.++.+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 38899999999999999999999999999998876543222100 112248889999999988887
Q ss_pred ecCCCCCCeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeec
Q 018248 69 NSGPHQSNKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQ 144 (359)
Q Consensus 69 ~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 144 (359)
+ .|+.|++||+.+++.+..+. |...|.+++|+|++..++ .|++|++||+++++....+.. ...+..++++|
T Consensus 142 ~----~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~~~ 216 (393)
T 1erj_A 142 A----EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI-EDGVTTVAVSP 216 (393)
T ss_dssp E----TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-SSCEEEEEECS
T ss_pred c----CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc-CCCcEEEEEEC
Confidence 7 78999999999999998888 999999999999998877 899999999999988777764 45678889988
Q ss_pred -CCCccEEEecCCCCeeEEEEecCC-eeeEEe-------ecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCC----
Q 018248 145 -NAGPMVMACPGLLKGQVRVEDYGT-KKSKYI-------TAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDG---- 211 (359)
Q Consensus 145 -~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~-------~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~---- 211 (359)
++. ++++ |+.|+.|++|+... ..+..+ .+|...|.+++|+|++++|++++.|+. |++||+++.
T Consensus 217 ~~~~--~l~~-~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~-v~~wd~~~~~~~~ 292 (393)
T 1erj_A 217 GDGK--YIAA-GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNANNKS 292 (393)
T ss_dssp TTCC--EEEE-EETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE-EEEEEC-------
T ss_pred CCCC--EEEE-EcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEECCCCCCcc
Confidence 444 3555 66899999998765 334444 578999999999999999999999999 999998763
Q ss_pred --------cEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeee
Q 018248 212 --------SLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSF 283 (359)
Q Consensus 212 --------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (359)
.+...+.+ |...|.+++|+|++++|++++.|+.|++||+.+++..
T Consensus 293 ~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~------------------------- 345 (393)
T 1erj_A 293 DSKTPNSGTCEVTYIG--HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL------------------------- 345 (393)
T ss_dssp --------CEEEEEEC--CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE-------------------------
T ss_pred cccCCCCCcceEEEec--ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE-------------------------
Confidence 33445555 7789999999999999999999999999999887611
Q ss_pred eEeeeecceEEecccceeEEeecCCcEEEeeecc------cCCEEEEEecCCeEEEEEeCC
Q 018248 284 RFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGR------QNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~~~~~dg~i~v~~~~~ 338 (359)
..++.|.+.|.+++|++ +++.|++|+.||.|++|++..
T Consensus 346 -----------------~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 346 -----------------LMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp -----------------EEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred -----------------EEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 12445667888888875 688999999999999999864
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-41 Score=285.13 Aligned_cols=284 Identities=14% Similarity=0.152 Sum_probs=221.1
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccC-CCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRN-PRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
.|..+|.+++|+|+ +|++|+ |+.|++|++..+.......+..+ |...|..++|+++++.++.++ .|++|++|
T Consensus 12 ~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s----~D~~v~iw 85 (330)
T 2hes_X 12 LYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS----FDSTVSIW 85 (330)
T ss_dssp CCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE----TTSCEEEE
T ss_pred cCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe----CCCcEEEE
Confidence 58999999999998 899999 99999999987544333444224 999999999999999888877 78999999
Q ss_pred ECCC-------ccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEccc----ceeeeeEeccCCCceeeeeecCC
Q 018248 82 DDHE-------NRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTD----LKLVDQIETVVNPTGLCDVSQNA 146 (359)
Q Consensus 82 d~~~-------~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~----~~~~~~~~~~~~~~~~~~~~~~~ 146 (359)
|+.. .+.+..+. |...|.+++|+|++.+++ .|+.|++||+.. .+.+..+..|...+..++|+|++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE 165 (330)
T ss_dssp EC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS
T ss_pred EcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC
Confidence 9853 34566666 899999999999999888 799999999942 25667788899999999999987
Q ss_pred CccEEEecCCCCeeEEEEecCC---eeeEEeecccccccEEEEccC--CcEEEEEeCCCCeEEEEEcCCC--------cE
Q 018248 147 GPMVMACPGLLKGQVRVEDYGT---KKSKYITAHASRIASIAMTLD--GRFVATASSKGTLIRVFNTMDG--------SL 213 (359)
Q Consensus 147 ~~~~l~~~g~~d~~v~~~~~~~---~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~~i~iwd~~~~--------~~ 213 (359)
.. +++ ++.|+.|++|+... ..+..+.+|...|.+++|+|+ +.+|++++.|+. |++||++++ ..
T Consensus 166 ~~--l~s-~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~-v~iw~~~~~~~~~~~~~~~ 241 (330)
T 2hes_X 166 AL--LAS-SSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST-VRVWKYMGDDEDDQQEWVC 241 (330)
T ss_dssp SE--EEE-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC-EEEEEEEEECTTSCEEEEE
T ss_pred CE--EEE-EcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe-EEEEEecCCCccccceeEE
Confidence 64 665 66899999997643 467788999999999999998 779999999999 999998754 33
Q ss_pred EEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceE
Q 018248 214 LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKY 293 (359)
Q Consensus 214 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (359)
...+.. .|...|.+++|++++ +|++++.||.|+||+..+++.. .. ...
T Consensus 242 ~~~~~~-~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~--------------------------~~----~~~ 289 (330)
T 2hes_X 242 EAILPD-VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWK--------------------------VF----AKR 289 (330)
T ss_dssp EEECCS-CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEE--------------------------EE----EEE
T ss_pred eeeccc-ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceE--------------------------EE----ecc
Confidence 344432 267899999999765 8899999999999998765300 00 000
Q ss_pred EecccceeEEeecCC-cEEEeeecc--cCCEEEEEecCCeEEEEEeCC
Q 018248 294 FSSKWSMAQFRLPEN-VQYLVGFGR--QNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~-~v~~~~~s~--~~~~l~~~~~dg~i~v~~~~~ 338 (359)
...+.. .|.+++|+| ++++|++|+.||.|++|++..
T Consensus 290 ---------~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 290 ---------ALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ---------SCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ---------ccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 112334 789999999 789999999999999998764
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.8e-41 Score=305.11 Aligned_cols=272 Identities=18% Similarity=0.265 Sum_probs=238.8
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++|+|++++|++++ |+.|++|+.+.... ..+. +|...+..+++++++..++..+ .|+.|++||
T Consensus 301 ~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~---~~~~-~~~~~v~~~~~s~~g~~l~~~~----~dg~v~~~~ 372 (577)
T 2ymu_A 301 GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHL---QTLT-GHSSSVWGVAFSPDGQTIASAS----DDKTVKLWN 372 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEE---EEEC-CCSSCEEEEEECTTSSEEEEEE----TTSEEEEEE
T ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCee---EEEe-CCCCCEEEEEECCCCCEEEEEe----CCCEEEEEc
Confidence 5889999999999999999999 99999999875322 2333 7899999999999999888877 789999999
Q ss_pred CCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLK 158 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 158 (359)
.+++.+..+. |...|.+++|+|++++++ .|+.|++||. +++.+..+..|...+..++|+|+++. +++ ++.|
T Consensus 373 -~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~--l~~-~~~d 447 (577)
T 2ymu_A 373 -RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQT--IAS-ASDD 447 (577)
T ss_dssp -TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSE--EEE-EETT
T ss_pred -CCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCE--EEE-EcCC
Confidence 5677777777 899999999999998887 7899999995 67788888999999999999998875 555 5579
Q ss_pred eeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEE
Q 018248 159 GQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWL 238 (359)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 238 (359)
+.|++|+.+++.+..+.+|...|.+++|+|++++|++++.|+. |++|| .+++.+..+.. |...|++++|+||+++|
T Consensus 448 ~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~-i~iw~-~~~~~~~~~~~--h~~~v~~l~~s~dg~~l 523 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWN-RNGQLLQTLTG--HSSSVRGVAFSPDGQTI 523 (577)
T ss_dssp SEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE-EEEEE-TTSCEEEEEEC--CSSCEEEEEECTTSSCE
T ss_pred CEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-EEEEc-CCCCEEEEEeC--CCCCEEEEEEcCCCCEE
Confidence 9999999999999999999999999999999999999999999 99999 47888888887 77899999999999999
Q ss_pred EEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeeccc
Q 018248 239 AASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQ 318 (359)
Q Consensus 239 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 318 (359)
++++.||.|+|||.. ++. ...+..|.+.|..++|+||
T Consensus 524 ~s~~~dg~v~lwd~~-~~~------------------------------------------~~~~~~h~~~v~~~~fs~d 560 (577)
T 2ymu_A 524 ASASDDKTVKLWNRN-GQL------------------------------------------LQTLTGHSSSVWGVAFSPD 560 (577)
T ss_dssp EEEETTSEEEEECTT-SCE------------------------------------------EEEEECCSSCEEEEEECTT
T ss_pred EEEECcCEEEEEeCC-CCE------------------------------------------EEEEcCCCCCEEEEEEcCC
Confidence 999999999999963 220 1124557789999999999
Q ss_pred CCEEEEEecCCeEEEEE
Q 018248 319 NNTIVIVGLDGSYYKCE 335 (359)
Q Consensus 319 ~~~l~~~~~dg~i~v~~ 335 (359)
+++|++++.||.|++|+
T Consensus 561 g~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 561 GQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEETTSCEEEEC
T ss_pred CCEEEEEeCCCEEEEeC
Confidence 99999999999999995
No 18
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.4e-40 Score=281.43 Aligned_cols=291 Identities=12% Similarity=0.123 Sum_probs=237.6
Q ss_pred CCCCceEEEEEccC-CCEEEEec-CCceEEEEcCCCcc---eeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeE
Q 018248 4 PDPITIHHLALNQD-HGCFATGT-ETGFRVYLSDPYKP---IMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKV 78 (359)
Q Consensus 4 ~h~~~v~~~~~s~~-g~~l~~~~-d~~i~iw~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i 78 (359)
.|.+.|++|+|+|+ +++|++|+ |++|+|||+...+. .....+. +|...|..++|+++++.++.++ .|+.|
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~-~h~~~V~~~~~s~dg~~l~s~~----~d~~i 110 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR-GHSHFVSDVVISSDGQFALSGS----WDGTL 110 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC-CCSSCEEEEEECTTSSEEEEEE----TTSEE
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe-CCCCCEEEEEECCCCCEEEEEc----ccccc
Confidence 59999999999997 68999999 99999999986543 2334455 8999999999999999988887 78999
Q ss_pred EEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEccccee-eeeEeccCCCceeeeeecCCCccEEEe
Q 018248 79 MIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKL-VDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 79 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
++|+........... +...+....+++++..++ .|+.+++||+..... ......+...+..+++++++...++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 999999888777776 778888999999988777 799999999865544 333456778888999999888777776
Q ss_pred cCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEec
Q 018248 154 PGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFS 232 (359)
Q Consensus 154 ~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 232 (359)
++.|+.|++|+... +....+.+|...|++++|+|++++|++|+.|+. |++||+++.+.+..+.. ...|.++.|+
T Consensus 191 -~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~~~---~~~v~~~~~~ 265 (340)
T 4aow_A 191 -CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ-AMLWDLNEGKHLYTLDG---GDIINALCFS 265 (340)
T ss_dssp -EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEEC---SSCEEEEEEC
T ss_pred -EcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe-EEEEEeccCceeeeecC---CceEEeeecC
Confidence 66799999988765 667778899999999999999999999999999 99999999999988874 3589999999
Q ss_pred CCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEE
Q 018248 233 SNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYL 312 (359)
Q Consensus 233 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (359)
|++.+++ ++.|+.|++||++++... ..+...........+...|.+
T Consensus 266 ~~~~~~~-~~~d~~i~iwd~~~~~~~---------------------------------~~~~~~~~~~~~~~h~~~v~~ 311 (340)
T 4aow_A 266 PNRYWLC-AATGPSIKIWDLEGKIIV---------------------------------DELKQEVISTSSKAEPPQCTS 311 (340)
T ss_dssp SSSSEEE-EEETTEEEEEETTTTEEE---------------------------------EEECCC-------CCCCCEEE
T ss_pred CCCceee-ccCCCEEEEEECCCCeEE---------------------------------EeccccceeeeccCCCCCEEE
Confidence 9887665 567899999999876411 011111111123445678999
Q ss_pred eeecccCCEEEEEecCCeEEEEEeCC
Q 018248 313 VGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 313 ~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
++|+||+++|++|+.||.|++|++..
T Consensus 312 l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 312 LAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 99999999999999999999999976
No 19
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-40 Score=302.99 Aligned_cols=320 Identities=11% Similarity=0.112 Sum_probs=243.0
Q ss_pred CCCCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC
Q 018248 4 PDPITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD 83 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 83 (359)
.+.+.+.+++|+|||++|++++++.|++|++.+++.. ..+. +|...|.+++++|++++++.++ .|++|++||+
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~--~~~~-~h~~~v~~~~~spdg~~lasg~----~d~~v~lWd~ 88 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDT--EIYT-EHSHQTTVAKTSPSGYYCASGD----VHGNVRIWDT 88 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCC--EEEC-CCSSCEEEEEECTTSSEEEEEE----TTSEEEEEES
T ss_pred cccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccC--eEec-CCCCceEEEEECCCCcEEEEEe----CCCCEEEeEC
Confidence 4577889999999999999999889999999866554 4444 8999999999999999998888 7899999998
Q ss_pred CCcc--EEeeec-cCcceeEEEEecceeEEE--ec-----CeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEe
Q 018248 84 HENR--YLGELS-FRSEVKNVRLRRDRIVVV--LN-----QKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 84 ~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~--~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
.+++ ....+. |...|.+++|+|+++.++ .+ +.|++|| .++....+.+|...+..++|+|++.. .+++
T Consensus 89 ~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~-~l~s 165 (611)
T 1nr0_A 89 TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPF-RIIS 165 (611)
T ss_dssp SSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSC-EEEE
T ss_pred CCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCe-EEEE
Confidence 7554 344555 889999999999999887 22 3688887 56667788899999999999998764 2454
Q ss_pred cCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecC-----CCCcceE
Q 018248 154 PGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRG-----AERAEIY 227 (359)
Q Consensus 154 ~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~-----~~~~~i~ 227 (359)
|+.|+.|++|+... +....+.+|...|.+++|+|+|++|++++.|+. |++||+.+++.+..+... .|...|.
T Consensus 166 -~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~-i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 166 -GSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT-IVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp -EETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred -EeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCc-EEEEECCCCcEeeeeccccccccccCCCEE
Confidence 66899999998654 567788999999999999999999999999999 999999999998888421 3788999
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCc--cCCCCCceeeeeEeeeecceEEecc--cceeEE
Q 018248 228 SLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNL--SSKNSSAISSFRFIRGVLPKYFSSK--WSMAQF 303 (359)
Q Consensus 228 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 303 (359)
+++|+|++++|++++.|++|++||+.+++................ ...+... +.....-..+.++.. .....+
T Consensus 244 ~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~s~s~d~~i~~~~~~~~~~~~~~ 320 (611)
T 1nr0_A 244 GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQAL---VSISANGFINFVNPELGSIDQVR 320 (611)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCE---EEEETTCCEEEEETTTTEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEE---EEEeCCCcEEEEeCCCCCcceEE
Confidence 999999999999999999999999987653211000000000000 0000000 000000000122211 112234
Q ss_pred eecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 304 RLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 304 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
..|.+.|.+++|+||+++|++++.||.|++|++..
T Consensus 321 ~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 321 YGHNKAITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 56778999999999999999999999999999865
No 20
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-39 Score=278.72 Aligned_cols=279 Identities=11% Similarity=0.134 Sum_probs=239.7
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|++++|+|++++|++|+ |+.|++||+.+++.. ..+. +|...+..++|+++++.++.++ .|+.|++||
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~~----~dg~i~iwd 102 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERL--GTLD-GHTGTIWSIDVDCFTKYCVTGS----ADYSIKLWD 102 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEE--EEEC-CCSSCEEEEEECTTSSEEEEEE----TTTEEEEEE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhh--hhhh-hcCCcEEEEEEcCCCCEEEEEe----CCCeEEEEE
Confidence 5899999999999999999999 999999999887655 4444 7999999999999999888877 789999999
Q ss_pred CCCccEEeeeccCcceeEEEEecceeEEE---ec-----CeEEEEEcccce-----------eeeeEeccCC--Cceeee
Q 018248 83 DHENRYLGELSFRSEVKNVRLRRDRIVVV---LN-----QKVYVYNFTDLK-----------LVDQIETVVN--PTGLCD 141 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~d-----~~i~i~d~~~~~-----------~~~~~~~~~~--~~~~~~ 141 (359)
+.+++.+..+.+...+.+++|+|++.+++ .+ +.|++||+.... ....+..+.. .+..++
T Consensus 103 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (369)
T 3zwl_B 103 VSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG 182 (369)
T ss_dssp TTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred CCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE
Confidence 99999999999999999999999998887 55 899999996653 2333444444 778888
Q ss_pred eecCCCccEEEecCCCCeeEEEEecCC--eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 142 VSQNAGPMVMACPGLLKGQVRVEDYGT--KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 142 ~~~~~~~~~l~~~g~~d~~v~~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
|+|+++. +++ ++.||.|++|+... .....+..|...|.+++|+|++++|++++.|+. |++||+++++.+..+.
T Consensus 183 ~~~~~~~--l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~- 257 (369)
T 3zwl_B 183 WSTKGKY--IIA-GHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN-SFLVDVSTLQVLKKYE- 257 (369)
T ss_dssp ECGGGCE--EEE-EETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEE-
T ss_pred EcCCCCE--EEE-EcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce-EEEEECCCCceeeeec-
Confidence 9988765 554 55799999999875 677888899999999999999999999999999 9999999999998887
Q ss_pred CCCCcceEEEEecCCCCEEEEEcCCC--------------cEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeE
Q 018248 220 GAERAEIYSLAFSSNAQWLAASSDKG--------------TVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRF 285 (359)
Q Consensus 220 ~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (359)
+...+.+++|+|+++++++++.++ .+++||+.+++.
T Consensus 258 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~---------------------------- 307 (369)
T 3zwl_B 258 --TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE---------------------------- 307 (369)
T ss_dssp --CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE----------------------------
T ss_pred --CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc----------------------------
Confidence 457899999999999999999888 788888776651
Q ss_pred eeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 286 IRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
...+..+.+.|.+++|+|++++|++++.||.|++|+++.
T Consensus 308 --------------~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 308 --------------IGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp --------------EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred --------------hhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 112445678899999999999999999999999999975
No 21
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.5e-39 Score=274.70 Aligned_cols=278 Identities=14% Similarity=0.169 Sum_probs=234.2
Q ss_pred CCCCceEEEEEccCCCEEEEecCCceEEEEcCCCccee---eeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIM---RRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMI 80 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~i 80 (359)
.|...|.+++|+|++++|++++|+.|++|++++.+... .... .+|...+..++++++++.+++++ .|+.|++
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~~ 123 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDC-LNRDNYIRSCKLLPDGCTLIVGG----EASTLSI 123 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEEC-SCTTSBEEEEEECTTSSEEEEEE----SSSEEEE
T ss_pred cCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccc-cCCCCcEEEEEEcCCCCEEEEEc----CCCcEEE
Confidence 58899999999999999999999999999998654321 1111 15889999999999999888877 6899999
Q ss_pred EECCCcc--EEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEec
Q 018248 81 WDDHENR--YLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACP 154 (359)
Q Consensus 81 wd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 154 (359)
||+.+++ ....+. |...|.+++|+|++..++ .|+.|++||+++++.+..+..|...+..++++|+++. +++
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~--l~~- 200 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK--LWT- 200 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE--EEE-
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCE--EEE-
Confidence 9999887 445555 788999999999998777 7899999999999999999889999999999998765 554
Q ss_pred CCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCC
Q 018248 155 GLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSN 234 (359)
Q Consensus 155 g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 234 (359)
++.|+.|++|+...........+...+.+++|+|++++|++++.++. |++||+++++.. .+.. |...|.+++|+|+
T Consensus 201 ~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-i~~~~~~~~~~~-~~~~--~~~~v~~~~~~~~ 276 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSN-VEVLHVNKPDKY-QLHL--HESCVLSLKFAYC 276 (337)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSC-EEEEETTSSCEE-EECC--CSSCEEEEEECTT
T ss_pred EecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCc-EEEEECCCCCeE-EEcC--CccceeEEEECCC
Confidence 55799999999876554444567889999999999999999999999 999999988765 4443 7789999999999
Q ss_pred CCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEee
Q 018248 235 AQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVG 314 (359)
Q Consensus 235 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 314 (359)
+++|++++.||.|++||+.+++.. . ...+...+..++
T Consensus 277 ~~~l~~~~~dg~i~~~~~~~~~~~-----------------------------------~--------~~~~~~~v~~~~ 313 (337)
T 1gxr_A 277 GKWFVSTGKDNLLNAWRTPYGASI-----------------------------------F--------QSKESSSVLSCD 313 (337)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEE-----------------------------------E--------EEECSSCEEEEE
T ss_pred CCEEEEecCCCcEEEEECCCCeEE-----------------------------------E--------EecCCCcEEEEE
Confidence 999999999999999999987611 0 112356789999
Q ss_pred ecccCCEEEEEecCCeEEEEEe
Q 018248 315 FGRQNNTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 315 ~s~~~~~l~~~~~dg~i~v~~~ 336 (359)
|+|++++|++++.||.|++|++
T Consensus 314 ~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 314 ISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp ECTTSCEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEecCCCeEEEEEE
Confidence 9999999999999999999987
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.3e-39 Score=291.05 Aligned_cols=275 Identities=17% Similarity=0.231 Sum_probs=237.3
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
..|...|.+++|+|+++.|++++ |+.|++|+.+. +. ...+. +|...+..+++++++..++.++ .|+.|++|
T Consensus 259 ~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-~~--~~~~~-~h~~~v~~~~~~~~~~~l~t~~----~d~~i~~w 330 (577)
T 2ymu_A 259 TGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-QL--LQTLT-GHSSSVWGVAFSPDGQTIASAS----DDKTVKLW 330 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CE--EEEEC-CCSSCEEEEEECTTSSEEEEEE----TTSCEEEE
T ss_pred ecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-cE--EEEEe-cCCCCeEEEEECCCCCEEEEEe----CCCeEEEE
Confidence 35889999999999999999999 99999999763 22 23444 8999999999999999888877 78999999
Q ss_pred ECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCC
Q 018248 82 DDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 82 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
|.... .+..+. |...+.+++|+|++..++ .|+.|++||. +++.+..+..|...+..++|+|+++. +++ ++.
T Consensus 331 ~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~--l~~-~~~ 405 (577)
T 2ymu_A 331 NRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT--IAS-ASD 405 (577)
T ss_dssp ETTSC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSC--EEE-EET
T ss_pred eCCCC-eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCE--EEE-EeC
Confidence 96654 445555 889999999999998887 7899999995 67888888999999999999999876 555 557
Q ss_pred CeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCE
Q 018248 158 KGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQW 237 (359)
Q Consensus 158 d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 237 (359)
|+.|++|+.+++.+..+.+|...|.+++|+|++++|++++.|+. |++||. +++.+..+.. |...|.+++|+|++++
T Consensus 406 d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-v~~w~~-~~~~~~~~~~--~~~~v~~~~~spd~~~ 481 (577)
T 2ymu_A 406 DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT-VKLWNR-NGQLLQTLTG--HSSSVRGVAFSPDGQT 481 (577)
T ss_dssp TSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEET-TSCEEEEEEC--CSSCEEEEEECTTSCE
T ss_pred CCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-EEEEEC-CCCEEEEEcC--CCCCEEEEEEcCCCCE
Confidence 99999999999999999999999999999999999999999999 999995 6777888876 7789999999999999
Q ss_pred EEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecc
Q 018248 238 LAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGR 317 (359)
Q Consensus 238 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 317 (359)
|++++.|+.|++||... +. ...+..|.+.|++++|+|
T Consensus 482 las~~~d~~i~iw~~~~-~~------------------------------------------~~~~~~h~~~v~~l~~s~ 518 (577)
T 2ymu_A 482 IASASDDKTVKLWNRNG-QL------------------------------------------LQTLTGHSSSVRGVAFSP 518 (577)
T ss_dssp EEEEETTSEEEEEETTS-CE------------------------------------------EEEEECCSSCEEEEEECT
T ss_pred EEEEeCCCEEEEEcCCC-CE------------------------------------------EEEEeCCCCCEEEEEEcC
Confidence 99999999999999532 20 112445677899999999
Q ss_pred cCCEEEEEecCCeEEEEEeC
Q 018248 318 QNNTIVIVGLDGSYYKCEFD 337 (359)
Q Consensus 318 ~~~~l~~~~~dg~i~v~~~~ 337 (359)
|+++|++++.||.|++|+.+
T Consensus 519 dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 519 DGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp TSSCEEEEETTSEEEEECTT
T ss_pred CCCEEEEEECcCEEEEEeCC
Confidence 99999999999999999853
No 23
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.1e-39 Score=279.45 Aligned_cols=310 Identities=14% Similarity=0.113 Sum_probs=236.7
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|..+|.+++|+|++++|++|+ |+.|++|++++++......+. +|...+..++++++++.++.++ .|+.|++||
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~----~dg~i~vwd 80 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCG----TDRNAYVWT 80 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEE----TTSCEEEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEc----CCCeEEEEE
Confidence 4889999999999999999998 999999999987533445555 7999999999999999888877 789999999
Q ss_pred CCCccEEeee---ccCcceeEEEEecceeEEE---ecCeEEEEEccccee---eeeE-eccCCCceeeeeecCCCccEEE
Q 018248 83 DHENRYLGEL---SFRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKL---VDQI-ETVVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 83 ~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~l~ 152 (359)
+.+++....+ .|...|.+++|+|++.+++ .|+.|++||+..++. ...+ ..|...+..++|+|+++. ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--l~ 158 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL--LA 158 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE--EE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE--EE
Confidence 9888755443 3888999999999998877 789999999977652 2333 456778899999998764 55
Q ss_pred ecCCCCeeEEEEec-------------------CCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcE
Q 018248 153 CPGLLKGQVRVEDY-------------------GTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSL 213 (359)
Q Consensus 153 ~~g~~d~~v~~~~~-------------------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~ 213 (359)
+ ++.|+.|++|+. .+..+..+..|...|.+++|+|++++|++++.|+. |++||+++++.
T Consensus 159 ~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~~~ 236 (372)
T 1k8k_C 159 A-GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST-VCLADADKKMA 236 (372)
T ss_dssp E-EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-EEEEEGGGTTE
T ss_pred E-EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE-EEEEECCCCce
Confidence 5 557999999985 34677788899999999999999999999999999 99999999999
Q ss_pred EEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccC--CCC--CCCCCccccCCCCCccCCCCCceeeeeEeeee
Q 018248 214 LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKV--DSG--SPGTSKLHSASEPNLSSKNSSAISSFRFIRGV 289 (359)
Q Consensus 214 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (359)
+..+.. |...|.+++|+|++++|+++ .|+.|++|++.. +.- .......... . .. .... ++.+
T Consensus 237 ~~~~~~--~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~------~-~~-~~~~---~~~~ 302 (372)
T 1k8k_C 237 VATLAS--ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQS------S-QR-GLTA---RERF 302 (372)
T ss_dssp EEEEEC--SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC----------------CH---HHHH
T ss_pred eEEEcc--CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccc------h-hh-hcch---hhhh
Confidence 999986 67799999999999998887 899999999988 320 0000000000 0 00 0000 0000
Q ss_pred cceEEecc-cce------eEE-eecCCcEEEeeec-ccC---CEEEEEecCCeEEEEEeCC
Q 018248 290 LPKYFSSK-WSM------AQF-RLPENVQYLVGFG-RQN---NTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 290 ~~~~~~~~-~~~------~~~-~~~~~~v~~~~~s-~~~---~~l~~~~~dg~i~v~~~~~ 338 (359)
+..+.. ... ..+ ..|.+.|.+++|. ++| ++|++++.||.|++|+++.
T Consensus 303 --~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 303 --QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp --HHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred --hhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 000000 000 112 2567899999966 666 9999999999999999865
No 24
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.9e-39 Score=299.71 Aligned_cols=300 Identities=13% Similarity=0.139 Sum_probs=232.6
Q ss_pred CCCCceEEEEEccCC-CEEEEec-CCceEEEEcCCCcc---eeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeE
Q 018248 4 PDPITIHHLALNQDH-GCFATGT-ETGFRVYLSDPYKP---IMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKV 78 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g-~~l~~~~-d~~i~iw~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i 78 (359)
.|.+.|++++|+|++ ++|++|+ |+.|++|++..... .....+. +|...|..++++++++.++.++ .|+.|
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~-~h~~~v~~v~~s~~g~~l~sgs----~Dg~v 454 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT-GHSHFVEDVVLSSDGQFALSGS----WDGEL 454 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE-CCSSCEEEEEECTTSSEEEEEE----TTSEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceec-CCCCcEEEEEECCCCCEEEEEe----CCCcE
Confidence 699999999999875 7899999 99999999976432 2234444 8999999999999999888877 78999
Q ss_pred EEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeE---eccCCCceeeeeecCCCccEE
Q 018248 79 MIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQI---ETVVNPTGLCDVSQNAGPMVM 151 (359)
Q Consensus 79 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l 151 (359)
++||+.+++.+..+. |...|.+++|+|++..++ .|++|++||+......... ..|...+.+++|+|++....+
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 999999999998887 999999999999998777 8999999998654333222 346777899999998765556
Q ss_pred EecCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEE
Q 018248 152 ACPGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLA 230 (359)
Q Consensus 152 ~~~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 230 (359)
++ ++.|+.|++|+... +....+.+|...|++++|+|++++|++++.|+. |++||+++++.+..+.. ...|.+++
T Consensus 535 ~s-~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~-i~iwd~~~~~~~~~~~~---~~~v~~~~ 609 (694)
T 3dm0_A 535 VS-ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWDLAEGKKLYSLEA---NSVIHALC 609 (694)
T ss_dssp EE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB-CEEEETTTTEEEECCBC---SSCEEEEE
T ss_pred EE-EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe-EEEEECCCCceEEEecC---CCcEEEEE
Confidence 66 66899999998875 556778899999999999999999999999999 99999999998887763 46899999
Q ss_pred ecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcE
Q 018248 231 FSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQ 310 (359)
Q Consensus 231 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (359)
|+|++.+|++++ ++.|+|||++++...... ...... ......... ....+.+...+
T Consensus 610 ~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~------~~~~~~----------------~~~~~~~~~-~~~~~~~~~~~ 665 (694)
T 3dm0_A 610 FSPNRYWLCAAT-EHGIKIWDLESKSIVEDL------KVDLKA----------------EAEKADNSG-PAATKRKVIYC 665 (694)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEE------CCCCC---------------------------------CCCCE
T ss_pred EcCCCcEEEEEc-CCCEEEEECCCCCChhhh------cccccc----------------ccccccccc-cccCCceeEEe
Confidence 999999888776 556999999986521100 000000 000000000 00000111246
Q ss_pred EEeeecccCCEEEEEecCCeEEEEEeC
Q 018248 311 YLVGFGRQNNTIVIVGLDGSYYKCEFD 337 (359)
Q Consensus 311 ~~~~~s~~~~~l~~~~~dg~i~v~~~~ 337 (359)
++++|+|||++|++|+.||.|++|++.
T Consensus 666 ~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 666 TSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 789999999999999999999999874
No 25
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=269.97 Aligned_cols=238 Identities=12% Similarity=0.203 Sum_probs=214.8
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
..|...|.+++|++++.++++++ |+.|++||+.+++... .+. +|...+..++++++++.++..+ .|+.|++|
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~--~~~-~~~~~~~~~~~spdg~~l~~g~----~dg~v~i~ 149 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIK--SID-AGPVDAWTLAFSPDSQYLATGT----HVGKVNIF 149 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE--EEE-CCTTCCCCEEECTTSSEEEEEC----TTSEEEEE
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEE--EEe-CCCccEEEEEECCCCCEEEEEc----CCCcEEEE
Confidence 35889999999999999999999 9999999999876553 333 5778888999999999888777 78999999
Q ss_pred ECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCC
Q 018248 82 DDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 82 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
++.+++....+. +...|.+++|+|++++++ .|+.|++||+++++.+..+..|..++..++|+|+++. +++ |+.
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~--l~s-~s~ 226 (321)
T 3ow8_A 150 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL--LVT-ASD 226 (321)
T ss_dssp ETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCE--EEE-ECT
T ss_pred EcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCE--EEE-EcC
Confidence 999999888887 778899999999999888 7999999999999999999999999999999998864 665 678
Q ss_pred CeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCC
Q 018248 158 KGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ 236 (359)
Q Consensus 158 d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 236 (359)
|+.|++|+.+. .....+.+|...|.+++|+|++++|++++.|+. |++||+++++++..+.. |...|.+++|+|+++
T Consensus 227 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~-v~iwd~~~~~~~~~~~~--h~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 227 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFFD--HQDQVWGVKYNGNGS 303 (321)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECC--CSSCEEEEEECTTSS
T ss_pred CCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-EEEEeCCCCEEEEEEcC--CCCcEEEEEECCCCC
Confidence 99999998764 567788999999999999999999999999999 99999999999999986 778999999999999
Q ss_pred EEEEEcCCCcEEEEEcc
Q 018248 237 WLAASSDKGTVHVFGLK 253 (359)
Q Consensus 237 ~l~~~~~dg~i~iw~~~ 253 (359)
+|++++.||+|+|||+.
T Consensus 304 ~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 304 KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEETTCCEEEEECC
T ss_pred EEEEEeCCCeEEEEeCC
Confidence 99999999999999964
No 26
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6e-39 Score=277.37 Aligned_cols=291 Identities=14% Similarity=0.200 Sum_probs=233.8
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCc----ceeeeecccCCCCceeEEEEecc----C---CEEEEEec
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYK----PIMRRDFDRNPRGGTQLVSMLFR----S---NIICLVNS 70 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~----~---~~~~~~~~ 70 (359)
..|...|++++|+| ++|++|+ |+.|++|++++.+ ......+. +|...|..++|+++ + +.++.++
T Consensus 13 ~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s~~- 88 (397)
T 1sq9_A 13 KAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTS- 88 (397)
T ss_dssp SCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEE-
T ss_pred hhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEEEc-
Confidence 46999999999999 7899988 9999999999776 12224444 79999999999998 7 7777766
Q ss_pred CCCCCCeEEEEECCCccE-----Eeeec-c-----CcceeEEEEe----cceeE-EE---ecCeEEEEEccc------ce
Q 018248 71 GPHQSNKVMIWDDHENRY-----LGELS-F-----RSEVKNVRLR----RDRIV-VV---LNQKVYVYNFTD------LK 125 (359)
Q Consensus 71 ~~~~d~~i~iwd~~~~~~-----~~~~~-~-----~~~v~~~~~~----~~~~~-~~---~d~~i~i~d~~~------~~ 125 (359)
.|+.|++||+.+++. +..+. | ...|.+++|+ |++.. ++ .|+.|++||+.+ ++
T Consensus 89 ---~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 89 ---FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp ---TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred ---CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 689999999998886 77776 6 4899999999 99987 66 789999999988 66
Q ss_pred eee-----eEe-------ccCCCceeeeeecCCCccEEEecCCCCeeEEEEecC-CeeeEEeec---c---cccccEEEE
Q 018248 126 LVD-----QIE-------TVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-TKKSKYITA---H---ASRIASIAM 186 (359)
Q Consensus 126 ~~~-----~~~-------~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~~~~~~~~---~---~~~i~~~~~ 186 (359)
.+. .+. .+...+..++|+|++ ++++ ++.|+.|++|+.. .+.+..+.. | ...|.+++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG---LIAT-GFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS---EEEE-ECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc---eEEE-EeCCCcEEEEECCCCceeEEEeccccccccCCccceEEE
Confidence 666 664 367788899999987 3555 6689999999876 567777888 8 999999999
Q ss_pred ccCCcEEEEEeCC---CCeEEEEEcCCCcEEEEeecCC-----------CCcceEEEEecCCCCEEEEEcCCCcEEEEEc
Q 018248 187 TLDGRFVATASSK---GTLIRVFNTMDGSLLQEMRRGA-----------ERAEIYSLAFSSNAQWLAASSDKGTVHVFGL 252 (359)
Q Consensus 187 s~~~~~l~~~~~d---g~~i~iwd~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 252 (359)
+|++++|++++.| +. |++||+++++.+..+.... |...|.+++|+|++++|++++.||.|++||+
T Consensus 242 ~~~~~~l~~~~~d~~~g~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGC-ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp CSSTTEEEEEEEETTEEE-EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred CCCCCEEEEEecCCCCce-EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 9999999999999 99 9999999999998887521 5679999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEe------cc------cceeEEeecCCcEEEeeecccC-
Q 018248 253 KVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFS------SK------WSMAQFRLPENVQYLVGFGRQN- 319 (359)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------~~~~~~~~~~~~v~~~~~s~~~- 319 (359)
++++... .+. .. ........+...|..++|+|++
T Consensus 321 ~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 321 KTKERIT---------------------------------TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp TTTEEEE---------------------------------EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTT
T ss_pred CCCceeE---------------------------------EEecccCcccchhhhhccccccccccCCceeEEEeccccc
Confidence 8865210 000 00 0000012236789999999998
Q ss_pred ---------CEEEEEecCCeEEEEEeCC
Q 018248 320 ---------NTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 320 ---------~~l~~~~~dg~i~v~~~~~ 338 (359)
++|++++.||.|++|+++.
T Consensus 368 ~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 368 RSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp SBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cccccccccceEEEecCCCcEEEEEcCC
Confidence 7999999999999999875
No 27
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.9e-39 Score=276.63 Aligned_cols=281 Identities=11% Similarity=0.072 Sum_probs=224.5
Q ss_pred CCCCCceEEEEEccCC-CEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEec-cCCEEEEEecCCCCCCeEE
Q 018248 3 QPDPITIHHLALNQDH-GCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLF-RSNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g-~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~~d~~i~ 79 (359)
..|...|.+++|+|++ ++|++|+ |+.|++|++.+++........ +|...|..++|++ +++.++.++ .|+.|+
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~----~d~~i~ 144 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGM-GPGDAITGMKFNQFNTNQLFVSS----IRGATT 144 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCC-STTCBEEEEEEETTEEEEEEEEE----TTTEEE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecC-CcCCceeEEEeCCCCCCEEEEEe----CCCEEE
Confidence 3688999999999999 9999999 999999999987766544433 7999999999998 556676666 789999
Q ss_pred EEECCCccEEeeec----cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEE
Q 018248 80 IWDDHENRYLGELS----FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 80 iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (359)
+||+.+ +.+..+. +...|.+++|+|++.+++ .|+.|++||+ +++.+..+..|...+..++|+|+++. +++
T Consensus 145 iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~ 221 (383)
T 3ei3_B 145 LRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDW-LMA 221 (383)
T ss_dssp EEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTT-EEE
T ss_pred EEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCC-EEE
Confidence 999886 4444443 347899999999998887 7899999999 67788889999999999999999874 244
Q ss_pred ecCCCCeeEEEEecCC----eeeEEeecccccccEEEEcc-CCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCC-----C
Q 018248 153 CPGLLKGQVRVEDYGT----KKSKYITAHASRIASIAMTL-DGRFVATASSKGTLIRVFNTMDGSLLQEMRRGA-----E 222 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~----~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~-----~ 222 (359)
+ ++.|+.|++|+... ........|...|.+++|+| ++++|++++.|+. |++||+++++.+..+..+. |
T Consensus 222 s-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 222 T-SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE-IRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp E-EETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE-EEEEETTBTTSCSEEEECCBCCCTT
T ss_pred E-EeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc-EEEEECCCCcccccccccccccccc
Confidence 4 56799999999874 33333337999999999999 9999999999999 9999999887766665421 1
Q ss_pred C----------cceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecce
Q 018248 223 R----------AEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPK 292 (359)
Q Consensus 223 ~----------~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (359)
. ..+..++|+|++++ +++.|+.|+|||+.+++..
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~---------------------------------- 343 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLV---------------------------------- 343 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEE----------------------------------
T ss_pred ccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCcee----------------------------------
Confidence 1 34455777777776 7789999999999887621
Q ss_pred EEecccceeEEee--cCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 293 YFSSKWSMAQFRL--PENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 293 ~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
..+.. +.+.+..++|+|++++|++++ ||.|++|+++.
T Consensus 344 --------~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 344 --------HQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp --------EEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred --------eeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 01221 235677789999999999997 99999999864
No 28
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.4e-39 Score=266.53 Aligned_cols=244 Identities=12% Similarity=0.145 Sum_probs=213.3
Q ss_pred eecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEE
Q 018248 43 RDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYV 118 (359)
Q Consensus 43 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i 118 (359)
+.+. +|.+.|..++|+|++..++.++ .|+.|++||+.+++.+..+. |..+|.+++|+|++++++ .|+.|++
T Consensus 7 ~~~~-~h~~~V~~~~fsp~~~~l~s~~----~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 7 KTFS-NRSDRVKGIDFHPTEPWVLTTL----YSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp EEEE-EECSCEEEEEECSSSSEEEEEE----TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred Eeec-CCCCceEEEEECCCCCEEEEEc----CCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 4555 8999999999999999988888 78999999999999999988 889999999999998887 8999999
Q ss_pred EEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCC--eeeEEeecccccccEEEEcc-CCcEEEE
Q 018248 119 YNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT--KKSKYITAHASRIASIAMTL-DGRFVAT 195 (359)
Q Consensus 119 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~--~~~~~~~~~~~~i~~~~~s~-~~~~l~~ 195 (359)
||+.+++.+..+..|...+..++|+|+++. +++ |+.|+.|++|+... .....+.+|...|.+++|+| ++.+|++
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~s-gs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPY--VLS-GSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSE--EEE-EETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCE--EEE-ECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 999999999999999999999999998864 565 66899999999765 44567889999999999999 6789999
Q ss_pred EeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecC--CCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCcc
Q 018248 196 ASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSS--NAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLS 273 (359)
Q Consensus 196 ~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 273 (359)
|+.|+. |++||++++.....+..+ +...+..+.|+| ++++|++++.|++|++||+++++.
T Consensus 159 gs~D~~-v~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~---------------- 220 (304)
T 2ynn_A 159 GCLDRT-VKVWSLGQSTPNFTLTTG-QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC---------------- 220 (304)
T ss_dssp EETTSE-EEEEETTCSSCSEEEECC-CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE----------------
T ss_pred EeCCCe-EEEEECCCCCccceeccC-CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc----------------
Confidence 999999 999999888776666543 557899999986 778999999999999999987651
Q ss_pred CCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 274 SKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
...+..|...|..++|+|+++.|++|+.||.|++|++..
T Consensus 221 --------------------------~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 221 --------------------------VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp --------------------------EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred --------------------------ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 112455678899999999999999999999999998865
No 29
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=277.85 Aligned_cols=302 Identities=10% Similarity=0.102 Sum_probs=231.3
Q ss_pred CCCCceEEEEEccCCCEEE-Eec----CCceEEEEcCCCcceeeeecccCCCCceeEEEEecc---CCEEEEEecCCCCC
Q 018248 4 PDPITIHHLALNQDHGCFA-TGT----ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFR---SNIICLVNSGPHQS 75 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~-~~~----d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~~~~~~~~~~d 75 (359)
.|...|.+++|+|++..++ +|+ |+.|++|++++++......+ +|...+.+++|+++ ++.++.++ .|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~----~d 89 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI--EKAKPIKCGTFGATSLQQRYLATGD----FG 89 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE--EESSCEEEEECTTCCTTTCCEEEEE----TT
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee--cccCcEEEEEEcCCCCCCceEEEec----CC
Confidence 4899999999999997664 553 78999999998766544444 58899999999998 47777776 68
Q ss_pred CeEEEEECCCcc-EEeeec-cCcceeEEEE------ecceeEEE---ecCeEEEEEcccce-eeeeEeccCC----Ccee
Q 018248 76 NKVMIWDDHENR-YLGELS-FRSEVKNVRL------RRDRIVVV---LNQKVYVYNFTDLK-LVDQIETVVN----PTGL 139 (359)
Q Consensus 76 ~~i~iwd~~~~~-~~~~~~-~~~~v~~~~~------~~~~~~~~---~d~~i~i~d~~~~~-~~~~~~~~~~----~~~~ 139 (359)
+.|++||+.+++ .+..+. |...|.++.| +|++..++ .|+.|++||+.+++ .+..+..+.. .+..
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWT 169 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEE
Confidence 999999999887 777777 8999999965 57787777 78999999998876 6667665444 5666
Q ss_pred ee----eecCCCccEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEcc---CCcEEEEEeCCCCeEEEEEcCCCc
Q 018248 140 CD----VSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTL---DGRFVATASSKGTLIRVFNTMDGS 212 (359)
Q Consensus 140 ~~----~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~~i~iwd~~~~~ 212 (359)
++ +++++.. +++ ++.|+.|++|+.+.........|...|.+++|+| ++.+|++++.||. |++||+++++
T Consensus 170 ~~~~~~~~~~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~ 245 (357)
T 3i2n_A 170 VAFGNAYNQEERV--VCA-GYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK-FHVFDMRTQH 245 (357)
T ss_dssp EEEECCCC-CCCE--EEE-EETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE-EEEEEEEEEE
T ss_pred EEEEeccCCCCCE--EEE-EccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe-EEEEeCcCCC
Confidence 66 5566653 555 5579999999998877777788999999999999 9999999999999 9999998765
Q ss_pred EEEEee---cCCCCcceEEEEecCCCC-EEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeee
Q 018248 213 LLQEMR---RGAERAEIYSLAFSSNAQ-WLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRG 288 (359)
Q Consensus 213 ~~~~~~---~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (359)
.+..+. ...|...|++++|+|+++ +|++++.||.|++||++.+...... ...+... .....+
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--------~~~g~~~-~~~~~~----- 311 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK--------DSEGIEM-GVAGSV----- 311 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C--------CTTSCCC-CCCCEE-----
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc--------cCCCCcc-cccccc-----
Confidence 443332 112778999999999998 8999999999999999986633100 0000000 000001
Q ss_pred ecceEEecccceeEEeecCCcEEEeeecccCCEEE-EEecCCeEEEEEeCC
Q 018248 289 VLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIV-IVGLDGSYYKCEFDP 338 (359)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~v~~~~~ 338 (359)
.....+..+.+.|.+++|+|++++|+ +++.||.|++|++..
T Consensus 312 ---------~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 312 ---------SLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp ---------EEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred ---------ceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 11223455678899999999999998 799999999999875
No 30
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.5e-39 Score=273.75 Aligned_cols=282 Identities=12% Similarity=0.050 Sum_probs=211.7
Q ss_pred CceEEEEEccCCCEEEEec-CC-------ceEEEEcCCCcce--------eeeecccCCCCceeEEEEeccCCEEEEEec
Q 018248 7 ITIHHLALNQDHGCFATGT-ET-------GFRVYLSDPYKPI--------MRRDFDRNPRGGTQLVSMLFRSNIICLVNS 70 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~-d~-------~i~iw~~~~~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 70 (359)
-||++++|+|||++|++|+ +. .|++|+++..... ....+. +|...+.++ +++++.++....
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~-~~~~~v~s~--~~~~~~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALE-DNDDSPTAI--DASKGIILVGCN 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECC-TTSCCCCEE--EEETTEEEEECC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEcc-CCCCceEEE--EeCCCEEEEEEC
Confidence 4799999999999999986 32 4999999765432 112343 566666655 456666655432
Q ss_pred CCC-------CCCeEEEEECCCccE-E---eeec------cCcceeEEEEecceeEEE-----ecCeEEEEEcccceeee
Q 018248 71 GPH-------QSNKVMIWDDHENRY-L---GELS------FRSEVKNVRLRRDRIVVV-----LNQKVYVYNFTDLKLVD 128 (359)
Q Consensus 71 ~~~-------~d~~i~iwd~~~~~~-~---~~~~------~~~~v~~~~~~~~~~~~~-----~d~~i~i~d~~~~~~~~ 128 (359)
... .|+.+++|++.+... + .... +...+..++|+|||++++ .|++|++||+++++.+.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 110 578999999765432 1 1111 334588999999998765 58999999999999988
Q ss_pred eEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeE--EeecccccccEEEEccCCcEEEEEeCCC----Ce
Q 018248 129 QIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSK--YITAHASRIASIAMTLDGRFVATASSKG----TL 202 (359)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~dg----~~ 202 (359)
.+. +...+..++|+|+++. +++ ++.++.+.+|..++.... ....|...|.+++|+|+++++++++.|+ .
T Consensus 172 ~~~-~~~~V~~v~fspdg~~--l~s-~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~- 246 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKV--VAY-ITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIV- 246 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSE--EEE-ECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEE-
T ss_pred EeC-CCCceEEEEEccCCce--EEe-ccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeE-
Confidence 886 5677999999999875 555 444555444666665543 3456888999999999999999999887 5
Q ss_pred EEEEEcCCCcE----EEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCC
Q 018248 203 IRVFNTMDGSL----LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSS 278 (359)
Q Consensus 203 i~iwd~~~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (359)
+++|++..... ...+.. |...|++++|+|||++||+|+.|++|+|||+++++..
T Consensus 247 i~~~~~~~~~~~~~~~~~~~~--~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~-------------------- 304 (365)
T 4h5i_A 247 LTKISIKSGNTSVLRSKQVTN--RFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS-------------------- 304 (365)
T ss_dssp EEEEEEETTEEEEEEEEEEES--SCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE--------------------
T ss_pred EeecccccceecceeeeeecC--CCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE--------------------
Confidence 78899877653 233444 6789999999999999999999999999999986521
Q ss_pred ceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCCC
Q 018248 279 AISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDPM 339 (359)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~ 339 (359)
..+ ++.|.+.|++++|+|||++|++|+.|++|+||+++..
T Consensus 305 -------------~~~--------~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 305 -------------KIF--------KQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp -------------EEE--------TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred -------------EEe--------cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 000 2346789999999999999999999999999999754
No 31
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3e-39 Score=279.90 Aligned_cols=239 Identities=13% Similarity=0.236 Sum_probs=214.6
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++|+|++++|++|+ |+.|++||+.+++.. ..+. +|...|..++++++++.++.++ .|+.|++||
T Consensus 148 ~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~--~~~~-~h~~~V~~v~~~p~~~~l~s~s----~D~~i~~wd 220 (410)
T 1vyh_C 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI--RTMH-GHDHNVSSVSIMPNGDHIVSAS----RDKTIKMWE 220 (410)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE--ECCC-CCSSCEEEEEECSSSSEEEEEE----TTSEEEEEE
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--EEEc-CCCCCEEEEEEeCCCCEEEEEe----CCCeEEEEE
Confidence 5889999999999999999999 999999999876544 4555 8999999999999999888777 789999999
Q ss_pred CCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCC-----------
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAG----------- 147 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 147 (359)
+.+++++..+. |...|.++.++|++.+++ .|+.|++||+.+++....+..|...+.+++|+|+..
T Consensus 221 ~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 300 (410)
T 1vyh_C 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSE 300 (410)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC
T ss_pred CCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcccc
Confidence 99999999988 889999999999998887 799999999999999999999999999999998642
Q ss_pred -------ccEEEecCCCCeeEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 148 -------PMVMACPGLLKGQVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 148 -------~~~l~~~g~~d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
..++++ |+.|+.|++|+.. +..+..+.+|...|.+++|+|++++|++|+.|+. |++||+.+++++..+..
T Consensus 301 ~~~~~~~g~~l~s-gs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~-i~vwd~~~~~~~~~~~~ 378 (410)
T 1vyh_C 301 TKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT-LRVWDYKNKRCMKTLNA 378 (410)
T ss_dssp -------CCEEEE-EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTE-EEEECCTTSCCCEEEEC
T ss_pred ccccCCCCCEEEE-EeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCceEEEEcC
Confidence 235665 6789999999875 5778888999999999999999999999999999 99999999999999887
Q ss_pred CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 018248 220 GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLK 253 (359)
Q Consensus 220 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 253 (359)
|...|++++|+|++.+|++|+.||+|+||+++
T Consensus 379 --h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 379 --HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp --CSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred --CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 77899999999999999999999999999864
No 32
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4e-39 Score=271.86 Aligned_cols=241 Identities=13% Similarity=0.130 Sum_probs=198.9
Q ss_pred CCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeec-ccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 5 DPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDF-DRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
+...|.+++|+|++ .|++|+ ||.|+|||+++++......+ ..+|.+.|.+++|+++++.++.++ .|++|++||
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs----~d~~i~iwd 155 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS----KDICIKVWD 155 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE----TTSCEEEEE
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe----CCCeEEEEE
Confidence 45679999999996 455666 99999999998775433222 128999999999999999988887 789999999
Q ss_pred CCCccEEeeec-cCcceeEEEEeccee-EEE---ecCeEEEEEcccceeeeeEec--cCCCceeeeeecCCCccEEEecC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDRI-VVV---LNQKVYVYNFTDLKLVDQIET--VVNPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~~-~~~---~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~g 155 (359)
+.+++.+..+. |...|.+++|+|++. +++ .|++|++||+++++....+.. +...+..++++|++.. ++++ |
T Consensus 156 ~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~l~s-g 233 (344)
T 4gqb_B 156 LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSE-VFVF-G 233 (344)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTT-EEEE-E
T ss_pred CCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCc-ceEE-e
Confidence 99999999998 999999999999874 444 799999999999888777643 4445678888887665 3444 6
Q ss_pred CCCeeEEEEecC-CeeeEEeecccccccEEEEccCC-cEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecC
Q 018248 156 LLKGQVRVEDYG-TKKSKYITAHASRIASIAMTLDG-RFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSS 233 (359)
Q Consensus 156 ~~d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 233 (359)
+.|+.|++|+.+ ++.+..+.+|...|++++|+|++ ++|++|+.|+. |+|||+++++.+ .+.+ |...|++++|+|
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-i~vwd~~~~~~~-~~~~--H~~~V~~v~~sp 309 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-LAVLDSSLSELF-RSQA--HRDFVRDATWSP 309 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTCCEEE-EECC--CSSCEEEEEECS
T ss_pred ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCcEE-EEcC--CCCCEEEEEEeC
Confidence 689999998875 57788899999999999999998 58999999999 999999988765 4444 788999999999
Q ss_pred CCC-EEEEEcCCCcEEEEEccCCC
Q 018248 234 NAQ-WLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 234 ~~~-~l~~~~~dg~i~iw~~~~~~ 256 (359)
+++ +|++++.|++|++|++.+..
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCeEEEEEcCCCeEEEEECCCCC
Confidence 986 67799999999999998754
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-38 Score=277.63 Aligned_cols=296 Identities=15% Similarity=0.163 Sum_probs=239.5
Q ss_pred CCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC
Q 018248 5 DPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD 83 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 83 (359)
|...|.+++|+|++++|++|+ |+.|++|+.. ++.. ..+. +|...+..++|+++++.++.++ .|+.|++||+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~----~d~~i~iwd~ 178 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-GALL--NVLN-FHRAPIVSVKWNKDGTHIISMD----VENVTILWNV 178 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEE--EEEC-CCCSCEEEEEECTTSSEEEEEE----TTCCEEEEET
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCee--eecc-CCCccEEEEEECCCCCEEEEEe----cCCeEEEEEC
Confidence 677999999999999999999 9999999943 3333 3444 7899999999999999888877 7899999999
Q ss_pred CCccEEeeec-cCcc---------------eeEEEEecceeEEE--ecCeEEEEEcccceeeeeEeccCCCceeeeeecC
Q 018248 84 HENRYLGELS-FRSE---------------VKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQN 145 (359)
Q Consensus 84 ~~~~~~~~~~-~~~~---------------v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (359)
.+++.+..+. +... +.++.|+|++.+++ .++.|++||+.+++.+..+..+...+..++|+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 258 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT 258 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC
Confidence 9999988887 4444 99999999988777 8999999999999888888889999999999998
Q ss_pred CCccEEEecCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCc
Q 018248 146 AGPMVMACPGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERA 224 (359)
Q Consensus 146 ~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~ 224 (359)
++. +++ ++.|+.|++|+... +....+..|...|.+++|+|++ ++++++.|+. |++||+++++.+..+.. |..
T Consensus 259 ~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~~~ 331 (425)
T 1r5m_A 259 NKL--LLS-ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS-VRLWSLKQNTLLALSIV--DGV 331 (425)
T ss_dssp TTE--EEE-EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSE-EEEEETTTTEEEEEEEC--TTC
T ss_pred CCE--EEE-EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCc-EEEEECCCCcEeEeccc--CCc
Confidence 874 555 55799999998765 5677788899999999999999 9999999999 99999999999988886 678
Q ss_pred ceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEe
Q 018248 225 EIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFR 304 (359)
Q Consensus 225 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (359)
.|.+++|+|++++|++++.||.|++||+.+......... ......+ .. ........+.
T Consensus 332 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~-------------~~~~~~~---~~------~~~~~~~~~~ 389 (425)
T 1r5m_A 332 PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLY-------------GNRDGIL---NP------LPIPLYASYQ 389 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECHHHHC------------------------------C------EECCEEEEEC
T ss_pred cEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeee-------------ccccccc---Cc------ccchhhhhhc
Confidence 999999999999999999999999999987652210000 0000000 00 0001223355
Q ss_pred ecCC--cEEEeeecccCCEEEEEecCCeEEEEEeC
Q 018248 305 LPEN--VQYLVGFGRQNNTIVIVGLDGSYYKCEFD 337 (359)
Q Consensus 305 ~~~~--~v~~~~~s~~~~~l~~~~~dg~i~v~~~~ 337 (359)
.+.. .|..++|+|++++|++++.||.|++|+++
T Consensus 390 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 390 SSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 5554 89999999999999999999999999885
No 34
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-40 Score=286.78 Aligned_cols=310 Identities=11% Similarity=0.099 Sum_probs=237.9
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCc--ceeeeecccCCCCceeEEEEecc-CCEEEEEecCCCCCCeEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYK--PIMRRDFDRNPRGGTQLVSMLFR-SNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~~~~~~~~d~~i~ 79 (359)
.|...|.+++|+|++++|++|+ |+.|++|++.... ......+. +|...+..++++++ ++.++.++ .|+.|+
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~----~dg~v~ 139 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGG----NNGEIF 139 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEEC----SSSCEE
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEc----CCCeEE
Confidence 5788999999999999999998 9999999998621 22334444 89999999999998 67777666 689999
Q ss_pred EEECCCcc------EEeee---c-cCcceeEEEEecc-eeEEE---ecCeEEEEEcccceeeeeEecc------CCCcee
Q 018248 80 IWDDHENR------YLGEL---S-FRSEVKNVRLRRD-RIVVV---LNQKVYVYNFTDLKLVDQIETV------VNPTGL 139 (359)
Q Consensus 80 iwd~~~~~------~~~~~---~-~~~~v~~~~~~~~-~~~~~---~d~~i~i~d~~~~~~~~~~~~~------~~~~~~ 139 (359)
+||+.+++ ....+ . |...|.+++|+|+ +.+++ .|+.|++||+++++.+..+..+ ...+..
T Consensus 140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEE
T ss_pred EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEE
Confidence 99998876 33333 3 8889999999998 55555 8999999999999998888776 678899
Q ss_pred eeeecCCCccEEEecCCCCe---eEEEEecCC--eeeEEee-cccccccEEEEcc-CCcEEEEEeCCCCeEEEEEcCCCc
Q 018248 140 CDVSQNAGPMVMACPGLLKG---QVRVEDYGT--KKSKYIT-AHASRIASIAMTL-DGRFVATASSKGTLIRVFNTMDGS 212 (359)
Q Consensus 140 ~~~~~~~~~~~l~~~g~~d~---~v~~~~~~~--~~~~~~~-~~~~~i~~~~~s~-~~~~l~~~~~dg~~i~iwd~~~~~ 212 (359)
++|+|++... +++ ++.++ .|++|+.+. .....+. +|...|.+++|+| ++++|++++.|+. |++||+++++
T Consensus 220 ~~~~~~~~~~-l~~-~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-v~~wd~~~~~ 296 (416)
T 2pm9_A 220 VEWHPKNSTR-VAT-ATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-VLLWNPESAE 296 (416)
T ss_dssp EEECSSCTTE-EEE-EECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-EEEECSSSCC
T ss_pred EEECCCCCCE-EEE-EECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-EEEeeCCCCc
Confidence 9999987653 333 44677 999999875 4566777 8999999999999 9999999999999 9999999999
Q ss_pred EEEEeecCCCCcceEEEEecCCC-CEEEEEcCCCcEEEEEccCCCCCCCCCcccc------CCCCCccCC--CCCceeee
Q 018248 213 LLQEMRRGAERAEIYSLAFSSNA-QWLAASSDKGTVHVFGLKVDSGSPGTSKLHS------ASEPNLSSK--NSSAISSF 283 (359)
Q Consensus 213 ~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~ 283 (359)
.+..+.. |...|.+++|+|++ ++|++++.|+.|++|++.+............ ..+.+.... .......+
T Consensus 297 ~~~~~~~--~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (416)
T 2pm9_A 297 QLSQFPA--RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVF 374 (416)
T ss_dssp EEEEEEC--SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSS
T ss_pred cceeecC--CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccc
Confidence 9999987 67899999999999 8999999999999999998764432111000 000000000 00000000
Q ss_pred eEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 284 RFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
.+.....+...+..++|+|||++|++++.||.|++|++..
T Consensus 375 ---------------~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 375 ---------------HLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp ---------------CCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred ---------------cccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 0000111235667899999999999999999999998875
No 35
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-39 Score=286.35 Aligned_cols=316 Identities=10% Similarity=-0.005 Sum_probs=222.4
Q ss_pred CCCceEEEEEccCC---------CEEEE-------------------ec-CCceEEEEcCCCccee--eeecccCCCCce
Q 018248 5 DPITIHHLALNQDH---------GCFAT-------------------GT-ETGFRVYLSDPYKPIM--RRDFDRNPRGGT 53 (359)
Q Consensus 5 h~~~v~~~~~s~~g---------~~l~~-------------------~~-d~~i~iw~~~~~~~~~--~~~~~~~h~~~v 53 (359)
+...|.+|+|+|++ ++||+ ++ |++|+||++++++... ...+. +|.+.|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~-~~~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV-HSFGEV 210 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEE-ECCCSE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEE-ecCCcE
Confidence 35677788888775 45555 55 7789999998765432 12233 567889
Q ss_pred eEEEEecc------CCEEEEEecCCCCCCeEEEEECCCccE-----------Eeeec-cCcceeEEEEecceeEEE--ec
Q 018248 54 QLVSMLFR------SNIICLVNSGPHQSNKVMIWDDHENRY-----------LGELS-FRSEVKNVRLRRDRIVVV--LN 113 (359)
Q Consensus 54 ~~~~~~~~------~~~~~~~~~~~~~d~~i~iwd~~~~~~-----------~~~~~-~~~~v~~~~~~~~~~~~~--~d 113 (359)
..++|+|+ +..++.++ .|++|++||+.+++. ...+. |...|.+++|++++.++. .|
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s----~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~D 286 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVS----QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKN 286 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEE----TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETT
T ss_pred EEEEECCCCCCCCCCceEEEEe----cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCC
Confidence 99999986 34666566 689999999977642 12444 788999999998875554 89
Q ss_pred CeEEEEEcccce-eeeeEeccCCCceee--eeecCCCccEEEecCCCCeeEEEEecCC-eeeEEeecccc--cccEEEEc
Q 018248 114 QKVYVYNFTDLK-LVDQIETVVNPTGLC--DVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITAHAS--RIASIAMT 187 (359)
Q Consensus 114 ~~i~i~d~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~~--~i~~~~~s 187 (359)
|+|++||+++++ +...+..|...|..+ ++++++. .++++ ++.|++|++|+.+. +....+.+|.. .|.+++|+
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~-~~laS-~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs 364 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFED-TVVST-VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC 364 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSC-CEEEE-EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCC-eEEEE-eccCCeEEEEECCCCCcccccccccccCcccceEeC
Confidence 999999998764 445678899999888 4555542 34565 67899999999765 44455556653 58899999
Q ss_pred cCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCC-----
Q 018248 188 LDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTS----- 262 (359)
Q Consensus 188 ~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~----- 262 (359)
|+++.+++++.|+. |++||++++.++..+.+ |.+.|++++|+|+|++|++|+.||+|++||+..+. .....
T Consensus 365 p~~~~l~s~~~d~t-v~lwd~~~~~~~~~l~g--H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~-~~~~~~~~~~ 440 (524)
T 2j04_B 365 PQIYSYIYSDGASS-LRAVPSRAAFAVHPLVS--RETTITAIGVSRLHPMVLAGSADGSLIITNAARRL-LHGIKNSSAT 440 (524)
T ss_dssp TTTTEEEEECSSSE-EEEEETTCTTCCEEEEE--CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSST-TTCC------
T ss_pred CCcCeEEEeCCCCc-EEEEECcccccceeeec--CCCceEEEEeCCCCCeEEEEECCCEEEEEechHhh-ccccccCccc
Confidence 99999999999999 99999999998888876 78899999999999999999999999999986542 11110
Q ss_pred ----ccccCCCCCccCCCCCceeeeeEeeeecceEEe-cccceeEEeecCCcEEEeeecccCC---EEEEEecCCeEEEE
Q 018248 263 ----KLHSASEPNLSSKNSSAISSFRFIRGVLPKYFS-SKWSMAQFRLPENVQYLVGFGRQNN---TIVIVGLDGSYYKC 334 (359)
Q Consensus 263 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~dg~i~v~ 334 (359)
.+...++++++. .+.+...+....+. .......+..+.+.|.+++|+|+++ .|++|+.||.|+||
T Consensus 441 ~~~~~v~~v~~sp~g~-------~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw 513 (524)
T 2j04_B 441 QKSLRLWKWDYSIKDD-------KYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLE 513 (524)
T ss_dssp CCCCEEEECBCCSSSC-------EEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEE
T ss_pred eeeeEEEEeccCCCCC-------eEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEE
Confidence 123445555442 11111100000011 1112334566778999999999964 99999999999999
Q ss_pred EeCC
Q 018248 335 EFDP 338 (359)
Q Consensus 335 ~~~~ 338 (359)
+++-
T Consensus 514 ~l~~ 517 (524)
T 2j04_B 514 YLSL 517 (524)
T ss_dssp ECSC
T ss_pred Eccc
Confidence 9875
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-40 Score=284.68 Aligned_cols=237 Identities=14% Similarity=0.109 Sum_probs=191.1
Q ss_pred CCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC
Q 018248 5 DPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD 83 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 83 (359)
+..+|++++|+|+|++|++|+ |+.|++|++.++.......+. +|...|..++|+++++.++.++ .|+.|++||+
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s----~d~~v~vwd~ 84 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCS----QDRNAYVYEK 84 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEE----TTSSEEEC--
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEe----CCCeEEEEEc
Confidence 578999999999999999998 999999999976423445555 8999999999999999888887 7899999999
Q ss_pred CCcc---EEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccce---eeeeEec-cCCCceeeeeecCCCccEEE
Q 018248 84 HENR---YLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLK---LVDQIET-VVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 84 ~~~~---~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 152 (359)
.+++ ....+. |...|.+++|+|++.+++ .|+.|++||+++++ ....+.. |...+..++|+|+++. ++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~ 162 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL--LA 162 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE--EE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE--EE
Confidence 9877 444444 899999999999998777 79999999998876 3667776 8889999999998764 55
Q ss_pred ecCCCCeeEEEEecC-------------------CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcE
Q 018248 153 CPGLLKGQVRVEDYG-------------------TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSL 213 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~-------------------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~ 213 (359)
+ ++.|+.|++|+.. +..+..+ .|...|.+++|+|++++|++++.|+. |++||+++++.
T Consensus 163 ~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~-i~iwd~~~~~~ 239 (377)
T 3dwl_C 163 A-GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS-VTIAYPSAPEQ 239 (377)
T ss_dssp E-EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE-EC-CEECSTTS
T ss_pred E-EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc-EEEEECCCCCC
Confidence 5 5679999999874 3445555 89999999999999999999999999 99999999887
Q ss_pred ----EEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 018248 214 ----LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 214 ----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 254 (359)
+..+.. |...|.+++|+|++++|++++.++.+ +|+...
T Consensus 240 ~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 240 PPRALITVKL--SQLPLRSLLWANESAIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp CEEECCCEEC--SSSCEEEEEEEETTEEEEEESSSSEE-EECCCC
T ss_pred cceeeEeecC--CCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCC
Confidence 666665 77899999999999999999877655 777664
No 37
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.3e-39 Score=282.11 Aligned_cols=284 Identities=12% Similarity=0.031 Sum_probs=217.6
Q ss_pred CCCCceEEEEEcc-CCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEec-cCCEEEEEecCCCCCCeEEE
Q 018248 4 PDPITIHHLALNQ-DHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLF-RSNIICLVNSGPHQSNKVMI 80 (359)
Q Consensus 4 ~h~~~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~~d~~i~i 80 (359)
+|...|+||+|+| ++++||+|+ ||.|+|||+++.+......+. +|.+.|.+++|+| +++.++.++ .|++|++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~-gH~~~V~~l~f~p~~~~~l~s~s----~D~~v~i 191 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGI-GAGGSITGLKFNPLNTNQFYASS----MEGTTRL 191 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCC-SSSCCCCEEEECSSCTTEEEEEC----SSSCEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEcc-CCCCCEEEEEEeCCCCCEEEEEe----CCCEEEE
Confidence 4778899999999 567899999 999999999877665555555 8999999999997 466776666 7899999
Q ss_pred EECCCccEEeeec---cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEec
Q 018248 81 WDDHENRYLGELS---FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACP 154 (359)
Q Consensus 81 wd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 154 (359)
||++++....... +...+.+++|+|++.+++ .|+.|++||++ ++.+..+..|...+..++|+|+++.. +++
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~-~~s- 268 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWF-LAT- 268 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSE-EEE-
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceE-EEE-
Confidence 9988765443333 345678999999998887 79999999985 56677888899999999999988763 343
Q ss_pred CCCCeeEEEEecCCe----eeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCC----cce
Q 018248 155 GLLKGQVRVEDYGTK----KSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAER----AEI 226 (359)
Q Consensus 155 g~~d~~v~~~~~~~~----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~----~~i 226 (359)
|+.|+.|++|+.... ......+|...|++++|+|+|++|++++.|+. |++||+.+++....+..+.+. ..+
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 347 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-IRVYSASQWDCPLGLIPHPHRHFQHLTP 347 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-EEEEESSSSSSEEEECCCCCCCCSSSCC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-EEEEECCCCccceEEeccccccccccee
Confidence 667999999987642 22334679999999999999999999999999 999999999887776543211 123
Q ss_pred EEEEecCCCCEEEEEc------------CCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEE
Q 018248 227 YSLAFSSNAQWLAASS------------DKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYF 294 (359)
Q Consensus 227 ~~~~~s~~~~~l~~~~------------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (359)
....|+|++.+++++. .++.|++||..+++.. ...+
T Consensus 348 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~--------------------------------~~l~ 395 (435)
T 4e54_B 348 IKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMM--------------------------------CQLY 395 (435)
T ss_dssp CBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEE--------------------------------EEEC
T ss_pred EEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEE--------------------------------EEEe
Confidence 4556777777766654 3357999999887621 0111
Q ss_pred ecccceeEEeecCCcEEEe-eecccCCEEEEEecCCeEEEEEeCC
Q 018248 295 SSKWSMAQFRLPENVQYLV-GFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 295 ~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
..+...|.++ +|+|+|++|++|+ |+.|+||++..
T Consensus 396 ---------~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~ 430 (435)
T 4e54_B 396 ---------DPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQE 430 (435)
T ss_dssp ---------CSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-
T ss_pred ---------CCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCc
Confidence 1123445555 7999999998875 88999998875
No 38
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.2e-38 Score=272.36 Aligned_cols=285 Identities=12% Similarity=0.162 Sum_probs=228.0
Q ss_pred CCCCCceEEEEEccC---C-C-EEEEecCCceEEEEcCCCcceeeee-cc-cCCCCceeEEEEeccC----CEEEEEecC
Q 018248 3 QPDPITIHHLALNQD---H-G-CFATGTETGFRVYLSDPYKPIMRRD-FD-RNPRGGTQLVSMLFRS----NIICLVNSG 71 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~---g-~-~l~~~~d~~i~iw~~~~~~~~~~~~-~~-~~h~~~v~~~~~~~~~----~~~~~~~~~ 71 (359)
..|..+|.+++|+|+ + . ++++++++.|++|++.+++...... +. ..|...+..++|+++. ..++.++
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-- 92 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG-- 92 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE--
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec--
Confidence 468999999999984 3 3 4444458899999998665432221 11 1367889999999984 4566555
Q ss_pred CCCCCeEEEEECCCccEEeeec-cCcceeEEEEec-ceeEEE---ecCeEEEEEcccceeeeeE---eccCCCceeeeee
Q 018248 72 PHQSNKVMIWDDHENRYLGELS-FRSEVKNVRLRR-DRIVVV---LNQKVYVYNFTDLKLVDQI---ETVVNPTGLCDVS 143 (359)
Q Consensus 72 ~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~ 143 (359)
.|+.|++||+.+++.+..+. |...|.+++|+| ++.+++ .|+.|++||+++++.+..+ ..+...+..++|+
T Consensus 93 --~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 93 --SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp --TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred --CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 68999999999999999998 999999999999 777776 7899999999999988888 6788899999999
Q ss_pred cCCCccEEEecCCCCeeEEEEecCCee-e----------------------------EEeecccccccEEEEccCCcEEE
Q 018248 144 QNAGPMVMACPGLLKGQVRVEDYGTKK-S----------------------------KYITAHASRIASIAMTLDGRFVA 194 (359)
Q Consensus 144 ~~~~~~~l~~~g~~d~~v~~~~~~~~~-~----------------------------~~~~~~~~~i~~~~~s~~~~~l~ 194 (359)
|+++. +++ ++.|+.|++|+..... . .....|...|.+++|+ +++|+
T Consensus 171 ~~~~~--l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 245 (366)
T 3k26_A 171 LLGEK--IMS-CGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL 245 (366)
T ss_dssp TTSSE--EEE-EETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred CCCCE--EEE-ecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence 98765 555 5579999999987522 1 2223489999999998 77999
Q ss_pred EEeCCCCeEEEEEcCCCcE--------------EEEeecCCCCcceEEEEecCC--CCEEEEEcCCCcEEEEEccCCCCC
Q 018248 195 TASSKGTLIRVFNTMDGSL--------------LQEMRRGAERAEIYSLAFSSN--AQWLAASSDKGTVHVFGLKVDSGS 258 (359)
Q Consensus 195 ~~~~dg~~i~iwd~~~~~~--------------~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~ 258 (359)
+++.|+. |++||+++++. +..+.. |...|++++|+|+ +++|++++.||.|++||+.+++..
T Consensus 246 ~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 246 SKSCENA-IVCWKPGKMEDDIDKIKPSESNVTILGRFDY--SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EECSSSE-EEEEEESSTTCCGGGCCTTCCCEEEEEEEEC--SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred EEecCCE-EEEEeCCCccccccccccCCcchheeccccc--cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 9999999 99999987744 666665 6778999999999 999999999999999999987622
Q ss_pred CCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeec--CCcEEEeeecccCCEEEEEecCCeEEEEEe
Q 018248 259 PGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLP--ENVQYLVGFGRQNNTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~ 336 (359)
. .....+..+ .+.|..++|+|++++|++++.||.|++|++
T Consensus 323 ~--------------------------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 323 K--------------------------------------AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp G--------------------------------------CEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred c--------------------------------------ccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 0 001113333 578999999999999999999999999987
Q ss_pred C
Q 018248 337 D 337 (359)
Q Consensus 337 ~ 337 (359)
.
T Consensus 365 ~ 365 (366)
T 3k26_A 365 L 365 (366)
T ss_dssp -
T ss_pred c
Confidence 4
No 39
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-37 Score=256.58 Aligned_cols=274 Identities=12% Similarity=0.131 Sum_probs=227.7
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
..|...|.+++| |++++|++|+ |+.|++||+++.+... .+. .|...+..++++++++.++.++ .|+.|++|
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~----~dg~i~~~ 86 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGT--VVY-TGQGFLNSVCYDSEKELLLFGG----KDTMINGV 86 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEE--EEE-ECSSCEEEEEEETTTTEEEEEE----TTSCEEEE
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEE--Eee-cCCccEEEEEECCCCCEEEEec----CCCeEEEE
Confidence 468999999999 9999999999 9999999998755443 333 6899999999999999988888 78999999
Q ss_pred ECCCc---cEEeeec-cCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEeccCCCceeeeeec-CCCccEEEecC
Q 018248 82 DDHEN---RYLGELS-FRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQ-NAGPMVMACPG 155 (359)
Q Consensus 82 d~~~~---~~~~~~~-~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~g 155 (359)
++... +.+..+. |...|.++.|+++..... .|+.|++|| .++....+..+...+..+++.+ +++. +++ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~--l~~-~ 161 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK--FLT-A 161 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE--EEE-E
T ss_pred EeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE--EEE-E
Confidence 98654 5566666 889999999954422222 899999999 6778888888999999999988 5443 444 5
Q ss_pred CCCeeEEEEecCCeeeEEeec-ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCC
Q 018248 156 LLKGQVRVEDYGTKKSKYITA-HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSN 234 (359)
Q Consensus 156 ~~d~~v~~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 234 (359)
+.|+.|++|+ .......+.. |...+.+++|+|++. +++++.|+. |++||+++++.+..+.. |...|.+++|+|+
T Consensus 162 ~~d~~i~i~d-~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~ 236 (313)
T 3odt_A 162 SADKTIKLWQ-NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGL-IKLVDMHTGDVLRTYEG--HESFVYCIKLLPN 236 (313)
T ss_dssp ETTSCEEEEE-TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSE-EEEEETTTCCEEEEEEC--CSSCEEEEEECTT
T ss_pred ECCCCEEEEe-cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCe-EEEEECCchhhhhhhhc--CCceEEEEEEecC
Confidence 5799999999 4456666666 899999999999998 889999999 99999999999999986 7789999999999
Q ss_pred CCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEee
Q 018248 235 AQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVG 314 (359)
Q Consensus 235 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 314 (359)
+ .|++++.||.|++||+++++.. ..+..+.+.+..++
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~------------------------------------------~~~~~~~~~i~~~~ 273 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLK------------------------------------------QVITLPAISIWSVD 273 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEE------------------------------------------EEEECSSSCEEEEE
T ss_pred C-CEEEEecCCEEEEEECCCCcee------------------------------------------EEEeccCceEEEEE
Confidence 9 5889999999999999887621 11344567899999
Q ss_pred ecccCCEEEEEecCCeEEEEEeCC
Q 018248 315 FGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 315 ~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
|+|+++ +++++.||.|++|+++.
T Consensus 274 ~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 274 CMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp ECTTSC-EEEEETTSCEEEEESCG
T ss_pred EccCCC-EEEEeCCCcEEEEeCCC
Confidence 999988 66799999999999876
No 40
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-37 Score=271.61 Aligned_cols=279 Identities=14% Similarity=0.171 Sum_probs=230.3
Q ss_pred CCCceEEEEEccCCC-EEEEec-CCceEEEEc----CCCcc------eeee--ecc-----cCCCCceeEEEEeccCCEE
Q 018248 5 DPITIHHLALNQDHG-CFATGT-ETGFRVYLS----DPYKP------IMRR--DFD-----RNPRGGTQLVSMLFRSNII 65 (359)
Q Consensus 5 h~~~v~~~~~s~~g~-~l~~~~-d~~i~iw~~----~~~~~------~~~~--~~~-----~~h~~~v~~~~~~~~~~~~ 65 (359)
|..+|.+++|+|+|+ +|++|+ |+.|++|++ .+++. .... .+. .+|...+.+++|+++++.+
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 568999999999999 999999 999999999 77652 2111 111 0257799999999999988
Q ss_pred EEEecCCCCCCeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCC-----
Q 018248 66 CLVNSGPHQSNKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNP----- 136 (359)
Q Consensus 66 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~----- 136 (359)
++++ .|+.|++|| .+++.+..+. |...|.+++|+|++.+++ .|+.|++||+.+++.+..+..+...
T Consensus 124 ~~~~----~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 198 (425)
T 1r5m_A 124 VTGV----ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN 198 (425)
T ss_dssp EEEE----TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred EEEe----CCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee
Confidence 8887 789999999 7778888887 899999999999998777 7899999999999998888776665
Q ss_pred ----------ceeeeeecCCCccEEEecCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEE
Q 018248 137 ----------TGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRV 205 (359)
Q Consensus 137 ----------~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~i 205 (359)
+..+++++++. +++ ++.++.|++|+... ..+..+..|...|.+++|+|++++|++++.|+. |++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i~i 273 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDDK---FVI-PGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT-LRI 273 (425)
T ss_dssp -------CCCBSCCEEEETTE---EEE-ECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEE
T ss_pred eccccCCcceeeEEEEcCCCE---EEE-EcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCE-EEE
Confidence 77888888643 444 55799999988765 566778889999999999999999999999999 999
Q ss_pred EEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeE
Q 018248 206 FNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRF 285 (359)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (359)
||+++++.+..+.. |...|.+++|+|++ +|++++.|+.|++||+++++..
T Consensus 274 ~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~--------------------------- 323 (425)
T 1r5m_A 274 WHGGNGNSQNCFYG--HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLL--------------------------- 323 (425)
T ss_dssp ECSSSBSCSEEECC--CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEE---------------------------
T ss_pred EECCCCccceEecC--CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEe---------------------------
Confidence 99999998888876 67899999999999 9999999999999999876511
Q ss_pred eeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 286 IRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
..+..+...+..++|+|++++|++++.||.|++|++..
T Consensus 324 ---------------~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 324 ---------------ALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp ---------------EEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred ---------------EecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 11334567889999999999999999999999999875
No 41
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-37 Score=257.67 Aligned_cols=246 Identities=13% Similarity=0.174 Sum_probs=199.5
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEecc--CCEEEEEecCCCCCCeEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFR--SNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~~~~d~~i~ 79 (359)
..|...|.+++|+|+|++||+|+ |+.|+||+++.........+. +|.+.|..++|++. ++.++.++ .|++|+
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s----~D~~v~ 80 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCS----YDGKVM 80 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEE----TTTEEE
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEc----CCCEEE
Confidence 57999999999999999999999 999999999754333345565 89999999999764 56777666 799999
Q ss_pred EEECCCcc--EEeeec-cCcceeEEEEecc--eeEEE---ecCeEEEEEcccce--eeeeEeccCCCceeeeeecCCC--
Q 018248 80 IWDDHENR--YLGELS-FRSEVKNVRLRRD--RIVVV---LNQKVYVYNFTDLK--LVDQIETVVNPTGLCDVSQNAG-- 147 (359)
Q Consensus 80 iwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~---~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 147 (359)
+||+.+++ .+..+. |...|.+++|+|+ +.+++ .|+.|++||++++. ....+..|...+..++|+|+..
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99998874 445555 8899999999997 66666 89999999997653 2355678888899999998741
Q ss_pred ---------ccEEEecCCCCeeEEEEecCC-e----eeEEeecccccccEEEEccCC---cEEEEEeCCCCeEEEEEcCC
Q 018248 148 ---------PMVMACPGLLKGQVRVEDYGT-K----KSKYITAHASRIASIAMTLDG---RFVATASSKGTLIRVFNTMD 210 (359)
Q Consensus 148 ---------~~~l~~~g~~d~~v~~~~~~~-~----~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~~i~iwd~~~ 210 (359)
..++++ |+.|+.|++|+.+. . ....+.+|...|.+++|+|++ .+|++++.|+. |++||+++
T Consensus 161 ~~~~~~~~~~~~l~s-gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~-v~iWd~~~ 238 (297)
T 2pm7_B 161 DGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT-CIIWTQDN 238 (297)
T ss_dssp ---------CCEEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEEEESS
T ss_pred cccCCCCCCcceEEE-EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc-EEEEEeCC
Confidence 234666 66899999998754 2 456788999999999999984 89999999999 99999987
Q ss_pred Cc---EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 018248 211 GS---LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 211 ~~---~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 255 (359)
.. ....+....|...|.+++|+|+|++|++++.|+.|+||+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred CCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 53 2233322336789999999999999999999999999998743
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-38 Score=270.80 Aligned_cols=243 Identities=13% Similarity=0.188 Sum_probs=197.2
Q ss_pred CCCCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecc-cCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFD-RNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++|+|++++++++.|+.|+|||+.+++......+. .+|...|.+++++++++.++.++ .|+.|++||
T Consensus 92 ~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs----~dg~v~iwd 167 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG----KDFSVKVWD 167 (357)
T ss_dssp ECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE----TTSCEEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe----CCCeEEEEE
Confidence 3778899999999998777666999999999876544322211 27999999999999999988877 789999999
Q ss_pred CCCccEEeeec-cCcceeEEEEeccee-EEE---ecCeEEEEEcccceeeeeEec--cCCCceeeeeecCCCccEEEecC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDRI-VVV---LNQKVYVYNFTDLKLVDQIET--VVNPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~~-~~~---~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~g 155 (359)
+.+++.+..+. |...|.+++|+|++. +++ .|+.|++||+++++....+.. +...+..++|+|++.. ++++ |
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~-~la~-g 245 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD-TFAC-G 245 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT-EEEE-E
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc-eEEE-e
Confidence 99999999998 899999999999874 333 789999999998887766543 4556778899998765 3444 6
Q ss_pred CCCeeEEEEecC-CeeeEEeecccccccEEEEccCC-cEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecC
Q 018248 156 LLKGQVRVEDYG-TKKSKYITAHASRIASIAMTLDG-RFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSS 233 (359)
Q Consensus 156 ~~d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 233 (359)
+.|+.|++|+.. ++.++.+.+|...|++++|+|++ ++|++|+.|+. |+|||+++++.+..+. |...|++++|+|
T Consensus 246 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-i~iwd~~~~~~~~~~~---H~~~V~~vafsP 321 (357)
T 4g56_B 246 DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-VAVLDADFSEVFRDLS---HRDFVTGVAWSP 321 (357)
T ss_dssp ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTSCEEEEECC---CSSCEEEEEECS
T ss_pred ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-EEEEECCCCcEeEECC---CCCCEEEEEEeC
Confidence 689999998875 46778889999999999999987 58999999999 9999999998876653 788999999998
Q ss_pred -CCCEEEEEcCCCcEEEEEccCCC
Q 018248 234 -NAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 234 -~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
++++|++++.||+|++|++.+..
T Consensus 322 ~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 322 LDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SSTTEEEEEETTSCEEEEECC---
T ss_pred CCCCEEEEEcCCCeEEEEECCCCC
Confidence 89999999999999999997754
No 43
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-37 Score=263.21 Aligned_cols=236 Identities=11% Similarity=0.139 Sum_probs=204.3
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcc--eeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKP--IMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMI 80 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~i 80 (359)
.|...|.+++|+|+|++|++|+ |+.+++|++.+.+. .....+. +|.+.+.++.+.+++. ++.++ .|+.|++
T Consensus 95 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-l~s~s----~d~~i~~ 168 (340)
T 1got_B 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA-GHTGYLSCCRFLDDNQ-IVTSS----GDTTCAL 168 (340)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE-CCSSCEEEEEEEETTE-EEEEE----TTSCEEE
T ss_pred cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec-CCCccEEEEEECCCCc-EEEEE----CCCcEEE
Confidence 4778899999999999999999 99999999986542 2334444 8999999999887654 55555 6899999
Q ss_pred EECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCC
Q 018248 81 WDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGL 156 (359)
Q Consensus 81 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 156 (359)
||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+..++|+|+++. +++ |+
T Consensus 169 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~--l~s-~s 245 (340)
T 1got_B 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA--FAT-GS 245 (340)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE--EEE-EE
T ss_pred EECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE--EEE-Ec
Confidence 9999999999988 999999999999998877 7999999999999999999999999999999998865 565 66
Q ss_pred CCeeEEEEecCC-eeeEEee--cccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecC
Q 018248 157 LKGQVRVEDYGT-KKSKYIT--AHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSS 233 (359)
Q Consensus 157 ~d~~v~~~~~~~-~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~ 233 (359)
.|+.|++|+... +.+..+. .+...|.+++|+|+|++|++|+.|+. |++||+.+++.+..+.+ |...|.+++|+|
T Consensus 246 ~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~~~~--h~~~v~~~~~s~ 322 (340)
T 1got_B 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAG--HDNRVSCLGVTD 322 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--CSSCEEEEEECT
T ss_pred CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe-EEEEEcccCcEeeEeec--CCCcEEEEEEcC
Confidence 899999999875 3444443 22347999999999999999999999 99999999999999987 778999999999
Q ss_pred CCCEEEEEcCCCcEEEEE
Q 018248 234 NAQWLAASSDKGTVHVFG 251 (359)
Q Consensus 234 ~~~~l~~~~~dg~i~iw~ 251 (359)
+|++|++|+.|++|+|||
T Consensus 323 dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 323 DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEcCCccEEecC
Confidence 999999999999999997
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.5e-38 Score=273.37 Aligned_cols=277 Identities=12% Similarity=0.101 Sum_probs=225.4
Q ss_pred ceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCc
Q 018248 8 TIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHEN 86 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 86 (359)
.+++++|+|+|++|++++ |+.|++|++.+.+.. ..+. +| ..+....+.++++.+++++ .|+.|++||+.++
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~--~~~~-~~-~~~~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~ 129 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGS--KMLK-RA-DYTAVDTAKLQMRRFILGT----TEGDIKVLDSNFN 129 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETT--TTSC-SC-CEEEEEEECSSSCEEEEEE----TTSCEEEECTTSC
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEeccccee--eEEe-cC-CceEEEEEecCCCEEEEEE----CCCCEEEEeCCCc
Confidence 355899999999999999 999999999875543 2232 23 3444456778888888777 7899999999999
Q ss_pred cEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEE
Q 018248 87 RYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVR 162 (359)
Q Consensus 87 ~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~ 162 (359)
+....+. |...|.+++|+|++.+++ .|+.|++||+.+++.+..+..|...+..++|+|++.. +++ ++.|+.|+
T Consensus 130 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~s-~~~d~~v~ 206 (420)
T 3vl1_A 130 LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRN--VLS-ASLDGTIR 206 (420)
T ss_dssp EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTE--EEE-EETTSCEE
T ss_pred ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCE--EEE-EcCCCcEE
Confidence 9988876 999999999999998877 7899999999999999999999999999999998775 555 56799999
Q ss_pred EEecCC-eeeEEeecc------------------------cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEe
Q 018248 163 VEDYGT-KKSKYITAH------------------------ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEM 217 (359)
Q Consensus 163 ~~~~~~-~~~~~~~~~------------------------~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~ 217 (359)
+|+... +.+..+..| ...+.+++|+|++++|++++.||. |++||+++++.+..+
T Consensus 207 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~ 285 (420)
T 3vl1_A 207 LWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV-ITVHNVFSKEQTIQL 285 (420)
T ss_dssp EEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC-EEEEETTTCCEEEEE
T ss_pred EeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe-EEEEECCCCceeEEc
Confidence 998764 555555542 245556667899999999999999 999999999988887
Q ss_pred ecCCCCcceEEEEecCCCC-EEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEec
Q 018248 218 RRGAERAEIYSLAFSSNAQ-WLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSS 296 (359)
Q Consensus 218 ~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (359)
... |...|.+++|+|+++ +|++++.||.|++||+++++..
T Consensus 286 ~~~-~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~-------------------------------------- 326 (420)
T 3vl1_A 286 PSK-FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP-------------------------------------- 326 (420)
T ss_dssp CCT-TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC--------------------------------------
T ss_pred ccc-cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc--------------------------------------
Confidence 643 678999999999999 9999999999999999987521
Q ss_pred ccceeEEee-cCCcEEEeeecccCCEEEEEecCCeEEEEEeCCC
Q 018248 297 KWSMAQFRL-PENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDPM 339 (359)
Q Consensus 297 ~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~ 339 (359)
...+.. +...+..+.+ +++++|++++.||.|++|++...
T Consensus 327 ---~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 327 ---VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp ---SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred ---hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 011222 3456777754 57789999999999999998763
No 45
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-38 Score=276.11 Aligned_cols=283 Identities=13% Similarity=0.162 Sum_probs=230.8
Q ss_pred CCCCceEEEEEccCCC-EEEEe----------c-CCceEEEEcCCCcce-eeeecccCCCCceeEEEEeccCCEEEEEec
Q 018248 4 PDPITIHHLALNQDHG-CFATG----------T-ETGFRVYLSDPYKPI-MRRDFDRNPRGGTQLVSMLFRSNIICLVNS 70 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~-~l~~~----------~-d~~i~iw~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 70 (359)
.+...|.+++|+|+|+ +|++| + |+.|++|++.+++.. ....+ .|...+..++|++++..++.++
T Consensus 10 ~~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~- 86 (416)
T 2pm9_A 10 AEFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL--QVDSKFNDLDWSHNNKIIAGAL- 86 (416)
T ss_dssp CEEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC--CCSSCEEEEEECSSSSCEEEEE-
T ss_pred hhhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE--ecCCceEEEEECCCCCeEEEEc-
Confidence 3456899999999997 89999 7 899999999876532 22333 5889999999999999888877
Q ss_pred CCCCCCeEEEEECCC----ccEEeeec-cCcceeEEEEecc-eeEEE---ecCeEEEEEcccce------eeee---Eec
Q 018248 71 GPHQSNKVMIWDDHE----NRYLGELS-FRSEVKNVRLRRD-RIVVV---LNQKVYVYNFTDLK------LVDQ---IET 132 (359)
Q Consensus 71 ~~~~d~~i~iwd~~~----~~~~~~~~-~~~~v~~~~~~~~-~~~~~---~d~~i~i~d~~~~~------~~~~---~~~ 132 (359)
.|+.|++||+.+ .+.+..+. |...|.+++|+|+ +.+++ .|+.|++||+.+++ .... +..
T Consensus 87 ---~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 87 ---DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp ---SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred ---cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccC
Confidence 689999999987 35777776 9999999999998 66666 78999999998776 3222 356
Q ss_pred cCCCceeeeeecCCCccEEEecCCCCeeEEEEecCC-eeeEEeecc------cccccEEEEccCC-cEEEEEeCCC---C
Q 018248 133 VVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITAH------ASRIASIAMTLDG-RFVATASSKG---T 201 (359)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~------~~~i~~~~~s~~~-~~l~~~~~dg---~ 201 (359)
+...+..++|+|++.. ++++ ++.|+.|++|+... +.+..+..+ ...+.+++|+|++ .++++++.|+ .
T Consensus 164 ~~~~v~~~~~~~~~~~-~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAH-VFAS-AGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp SSCCCCEEEECSSCTT-EEEE-ESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred CCCCeeEEEeCCCCCc-EEEE-EcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 7788999999998544 2444 56799999998765 556666655 7889999999997 6899999998 9
Q ss_pred eEEEEEcCCC-cEEEEee-cCCCCcceEEEEecC-CCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCC
Q 018248 202 LIRVFNTMDG-SLLQEMR-RGAERAEIYSLAFSS-NAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSS 278 (359)
Q Consensus 202 ~i~iwd~~~~-~~~~~~~-~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (359)
|++||++++ +.+..+. . |...|.+++|+| ++++|++++.||.|++||+++++..
T Consensus 242 -i~~~d~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~-------------------- 298 (416)
T 2pm9_A 242 -ILIWDLRNANTPLQTLNQG--HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL-------------------- 298 (416)
T ss_dssp -CCEEETTSTTSCSBCCCSC--CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE--------------------
T ss_pred -EEEEeCCCCCCCcEEeecC--ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc--------------------
Confidence 999999986 5555565 4 778999999999 9999999999999999999886511
Q ss_pred ceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccC-CEEEEEecCCeEEEEEeCCC
Q 018248 279 AISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQN-NTIVIVGLDGSYYKCEFDPM 339 (359)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~v~~~~~~ 339 (359)
..+..+.+.+..++|+|++ .+|++++.||.|++|++...
T Consensus 299 ----------------------~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 299 ----------------------SQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp ----------------------EEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred ----------------------eeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 1134456788999999998 89999999999999999764
No 46
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-37 Score=273.00 Aligned_cols=310 Identities=12% Similarity=0.150 Sum_probs=226.8
Q ss_pred CCCCCceEEEEEcc-CCCEEEEec-CCceEEEEcCC---Ccce-eeeecccCCCCceeEEEEeccCCEEEEEecCCCCCC
Q 018248 3 QPDPITIHHLALNQ-DHGCFATGT-ETGFRVYLSDP---YKPI-MRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSN 76 (359)
Q Consensus 3 ~~h~~~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~---~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~ 76 (359)
..|.+.|++++|+| ++++|++|+ |+.|+|||+.+ +... ....+ +|...|.+++++++++.++.++ .|+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s----~dg 133 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY--DCSSTVTQITMIPNFDAFAVSS----KDG 133 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE--ECSSCEEEEEECTTSSEEEEEE----TTS
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec--cCCCCEEEEEEeCCCCEEEEEe----CCC
Confidence 46889999999999 999999999 99999999875 3211 12333 5899999999999888888887 789
Q ss_pred eEEEEECC---CccEEeeec-------------cCcceeEEE--EecceeEEE---ecCeEEEEEcccceeeeeEec--c
Q 018248 77 KVMIWDDH---ENRYLGELS-------------FRSEVKNVR--LRRDRIVVV---LNQKVYVYNFTDLKLVDQIET--V 133 (359)
Q Consensus 77 ~i~iwd~~---~~~~~~~~~-------------~~~~v~~~~--~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~--~ 133 (359)
.|++||+. +++.+..+. +...+.++. +++++.+++ .|+.|++||+++++.+..+.. |
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h 213 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR 213 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC
Confidence 99999984 554444332 334555655 456777777 889999999999999999987 7
Q ss_pred CCCceeeeeecCCCccEEEecCCCCeeEEEEecCC-eeeEEee-cccccccEEEEc----cCCcEEEEEeCCCCeEEEEE
Q 018248 134 VNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYIT-AHASRIASIAMT----LDGRFVATASSKGTLIRVFN 207 (359)
Q Consensus 134 ~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~-~~~~~i~~~~~s----~~~~~l~~~~~dg~~i~iwd 207 (359)
...+..++|+|++.. +++ |+.||.|++|+.+. ..+..+. .|...|.+++|+ |++.+|++++.|+. |++||
T Consensus 214 ~~~v~~~~~s~~~~~--l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~-i~iwd 289 (437)
T 3gre_A 214 HGAVSSICIDEECCV--LIL-GTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF-LTIWN 289 (437)
T ss_dssp GCCEEEEEECTTSCE--EEE-EETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE-EEEEE
T ss_pred CCceEEEEECCCCCE--EEE-EcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc-EEEEE
Confidence 888999999998764 555 66799999998765 5556665 788899999555 56889999999999 99999
Q ss_pred cCCCcEEEEeecCC------------------------CCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCc
Q 018248 208 TMDGSLLQEMRRGA------------------------ERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSK 263 (359)
Q Consensus 208 ~~~~~~~~~~~~~~------------------------~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 263 (359)
+++++.+..+..+. |...|++++|+ ++++|++++.|+.|++||+.+++.......
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 290 FVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp TTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred cCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEec
Confidence 99999988887532 55678999999 789999999999999999998764321100
Q ss_pred cccCCCCCccCCCCCceeeeeEee-----eecceE--EecccceeEEeecCCcEEEeeeccc--CCEEEEEecCCeEEEE
Q 018248 264 LHSASEPNLSSKNSSAISSFRFIR-----GVLPKY--FSSKWSMAQFRLPENVQYLVGFGRQ--NNTIVIVGLDGSYYKC 334 (359)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~v~ 334 (359)
. ......+.... ...... ............|.+.|.+++|+++ +.+|++|+.||.|++|
T Consensus 369 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw 436 (437)
T 3gre_A 369 P------------SRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIF 436 (437)
T ss_dssp C--------------CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEE
T ss_pred c------------cccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEe
Confidence 0 00000000000 000000 0000111223346789999999998 7899999999999999
Q ss_pred E
Q 018248 335 E 335 (359)
Q Consensus 335 ~ 335 (359)
+
T Consensus 437 ~ 437 (437)
T 3gre_A 437 Q 437 (437)
T ss_dssp C
T ss_pred C
Confidence 5
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.9e-37 Score=266.87 Aligned_cols=286 Identities=9% Similarity=0.074 Sum_probs=226.0
Q ss_pred CceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 7 ITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
..+....|+|++++|++|+ |+.|++|++++++.. ..+. +|...|..++|+++++.++.++ .|+.|++||+.+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~s----~d~~i~iwd~~~ 170 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR--EIDQ-AHVSEITKLKFFPSGEALISSS----QDMQLKIWSVKD 170 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE--EETT-SSSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTT
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCccee--eecc-cccCccEEEEECCCCCEEEEEe----CCCeEEEEeCCC
Confidence 4455567899999999999 999999999865443 4444 8999999999999999888777 789999999999
Q ss_pred ccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccC------------------------CCc
Q 018248 86 NRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVV------------------------NPT 137 (359)
Q Consensus 86 ~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~------------------------~~~ 137 (359)
++.+..+. |...|.+++|+|++..++ .|+.|++||+++++.+..+..+. ..+
T Consensus 171 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 171 GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 99988888 999999999999998777 78999999999999888886432 334
Q ss_pred eeeeeecCCCccEEEecCCCCeeEEEEecCC-eeeEEe-ecccccccEEEEccCCc-EEEEEeCCCCeEEEEEcCCCcE-
Q 018248 138 GLCDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYI-TAHASRIASIAMTLDGR-FVATASSKGTLIRVFNTMDGSL- 213 (359)
Q Consensus 138 ~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~-~~~~~~i~~~~~s~~~~-~l~~~~~dg~~i~iwd~~~~~~- 213 (359)
..++|+|+++. +++ |+.||.|++|+... .....+ ..|...|.+++|+|+++ +|++++.||. |++||+++++.
T Consensus 251 ~~~~~s~~~~~--l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~-i~vwd~~~~~~~ 326 (420)
T 3vl1_A 251 NNLEFGTYGKY--VIA-GHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM-LAQWDLRSPECP 326 (420)
T ss_dssp CTTCSSCTTEE--EEE-EETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSC
T ss_pred cceEEcCCCCE--EEE-EcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe-EEEEEcCCCcCc
Confidence 44556666553 555 66799999998765 334444 45888999999999999 9999999999 99999998754
Q ss_pred EEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceE
Q 018248 214 LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKY 293 (359)
Q Consensus 214 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (359)
+..+..+ +...|.++.+ +++++|++++.|+.|++|++........
T Consensus 327 ~~~~~~~-~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~--------------------------------- 371 (420)
T 3vl1_A 327 VGEFLIN-EGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERP--------------------------------- 371 (420)
T ss_dssp SEEEEES-TTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSC---------------------------------
T ss_pred hhhhhcc-CCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCcc---------------------------------
Confidence 6666653 5668888855 5788999999999999999988542210
Q ss_pred EecccceeEEeecCCcEEEeeecccCC---EEEEEecCCeEEEEEeCC
Q 018248 294 FSSKWSMAQFRLPENVQYLVGFGRQNN---TIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~dg~i~v~~~~~ 338 (359)
.........+..+.+.+..++|+|+++ .|++++.+|.+.+|+++.
T Consensus 372 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 372 AIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 000000011233457889999999999 899999999999998853
No 48
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8e-37 Score=258.01 Aligned_cols=276 Identities=13% Similarity=0.145 Sum_probs=227.9
Q ss_pred CCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC
Q 018248 5 DPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD 83 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 83 (359)
+..+|.+++|+|||++++++. ++.+.+|........ ...+ +|...+..+++++++..++.++ |+.|++||+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~h~~~v~~~~~~~~~~~l~~~~-----dg~i~iw~~ 79 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQ-INTL--NHGEVVCAVTISNPTRHVYTGG-----KGCVKVWDI 79 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEE-EEEE--CCSSCCCEEEECSSSSEEEEEC-----BSEEEEEET
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCcccc-ceec--cCCCceEEEEEecCCcEEEEcC-----CCeEEEEEC
Confidence 467899999999999999888 676666654432222 2233 7999999999999888877665 599999999
Q ss_pred CCccEEeee------ccCcceeEEEEecceeEEE---ecCeEEEEEcccce--eeeeEeccCCCceeeeeecCCCccEEE
Q 018248 84 HENRYLGEL------SFRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLK--LVDQIETVVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 84 ~~~~~~~~~------~~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (359)
.+++....+ .|...|.+++|+|++.+++ .|+.|++||+.+++ ....+..+...+..++++|+++. ++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--l~ 157 (337)
T 1gxr_A 80 SHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKV--CF 157 (337)
T ss_dssp TSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSE--EE
T ss_pred CCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCE--EE
Confidence 876533222 3778999999999998777 78999999998776 56667778888899999998765 55
Q ss_pred ecCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEe
Q 018248 153 CPGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAF 231 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 231 (359)
+ ++.|+.|++|+... +....+..|...+.+++|+|++++|++++.|+. |++||+++++.+..+. +...+.+++|
T Consensus 158 ~-~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~---~~~~v~~~~~ 232 (337)
T 1gxr_A 158 S-CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT-VRSWDLREGRQLQQHD---FTSQIFSLGY 232 (337)
T ss_dssp E-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEE---CSSCEEEEEE
T ss_pred E-EeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCc-EEEEECCCCceEeeec---CCCceEEEEE
Confidence 4 55799999988754 667778889999999999999999999999999 9999999999888876 5678999999
Q ss_pred cCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEE
Q 018248 232 SSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQY 311 (359)
Q Consensus 232 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (359)
+|++++|++++.++.|++||+++++.. .+..+.+.+.
T Consensus 233 s~~~~~l~~~~~~~~i~~~~~~~~~~~-------------------------------------------~~~~~~~~v~ 269 (337)
T 1gxr_A 233 CPTGEWLAVGMESSNVEVLHVNKPDKY-------------------------------------------QLHLHESCVL 269 (337)
T ss_dssp CTTSSEEEEEETTSCEEEEETTSSCEE-------------------------------------------EECCCSSCEE
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCCeE-------------------------------------------EEcCCcccee
Confidence 999999999999999999999876510 1223457889
Q ss_pred EeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 312 LVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 312 ~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
.++|+|++++|++++.||.|++|++..
T Consensus 270 ~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 270 SLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEECCCCCEEEEecCCCcEEEEECCC
Confidence 999999999999999999999999876
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-36 Score=261.10 Aligned_cols=275 Identities=10% Similarity=0.070 Sum_probs=225.8
Q ss_pred eEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc
Q 018248 9 IHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR 87 (359)
Q Consensus 9 v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 87 (359)
+.+++|++ ..+++++ |+.|++|++++++....... .|...+..++|+++++.+++++ .|+.|++||+.+++
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~--~~~~~v~~v~~s~~~~~l~~~~----~dg~i~iwd~~~~~ 167 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAET--DESTYVASVKWSHDGSFLSVGL----GNGLVDIYDVESQT 167 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEEC--CTTCCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCC
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeec--CCCCCEEEEEECCCCCEEEEEC----CCCeEEEEECcCCe
Confidence 44567765 4455555 99999999998776644443 4889999999999999888877 68999999999999
Q ss_pred EEeeec-cCcceeEEEEecceeEEE-ecCeEEEEEcc-cceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEE
Q 018248 88 YLGELS-FRSEVKNVRLRRDRIVVV-LNQKVYVYNFT-DLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVE 164 (359)
Q Consensus 88 ~~~~~~-~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~ 164 (359)
.+..+. |...|.+++|+++..... .|+.|++||++ ....+..+..|...+..++|+|++.. +++ |+.|+.|++|
T Consensus 168 ~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~s-~~~d~~v~iw 244 (401)
T 4aez_A 168 KLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQ--LAS-GGNDNVVQIW 244 (401)
T ss_dssp EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE--EEE-EETTSCEEEE
T ss_pred EEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCE--EEE-EeCCCeEEEc
Confidence 999987 999999999966533333 89999999997 56677888889999999999997764 555 5579999999
Q ss_pred ecCC-eeeEEeecccccccEEEEccCCc-EEEEEe--CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEE
Q 018248 165 DYGT-KKSKYITAHASRIASIAMTLDGR-FVATAS--SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAA 240 (359)
Q Consensus 165 ~~~~-~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~--~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 240 (359)
+... .....+..|...|.+++|+|++. ++++++ .|+. |++||+.+++.+..+. +...|.+++|+|++++|++
T Consensus 245 d~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~-i~i~d~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 245 DARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ-IHFWNAATGARVNTVD---AGSQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp ETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE-EEEEETTTCCEEEEEE---CSSCEEEEEECSSSSEEEE
T ss_pred cCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE-EEEEECCCCCEEEEEe---CCCcEEEEEECCCCCeEEE
Confidence 8875 56677888999999999999775 666655 7999 9999999999998887 4568999999999999998
Q ss_pred E--cCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeeccc
Q 018248 241 S--SDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQ 318 (359)
Q Consensus 241 ~--~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 318 (359)
+ +.||.|++|++.+++.. . ...+..+.+.|..++|+|+
T Consensus 321 ~~g~~dg~i~v~~~~~~~~~---------------------------------~-------~~~~~~h~~~v~~~~~s~d 360 (401)
T 4aez_A 321 THGFPDNNLSIWSYSSSGLT---------------------------------K-------QVDIPAHDTRVLYSALSPD 360 (401)
T ss_dssp EECTTTCEEEEEEEETTEEE---------------------------------E-------EEEEECCSSCCCEEEECTT
T ss_pred EeecCCCcEEEEecCCccce---------------------------------e-------EEEecCCCCCEEEEEECCC
Confidence 4 48999999999875411 0 0113345678899999999
Q ss_pred CCEEEEEecCCeEEEEEeCC
Q 018248 319 NNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 319 ~~~l~~~~~dg~i~v~~~~~ 338 (359)
+++|++++.||.|++|++..
T Consensus 361 g~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC
T ss_pred CCEEEEEeCCCcEEEEECCC
Confidence 99999999999999999976
No 50
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.6e-36 Score=261.09 Aligned_cols=276 Identities=12% Similarity=0.128 Sum_probs=228.6
Q ss_pred ceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc
Q 018248 8 TIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR 87 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 87 (359)
.++.|+||++ .+||+|.|++|+|||..+++......+. +|...|.+++|+++++.++.++ .|+.|++||+.+++
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~-~~~~~V~sv~fspdg~~lasgs----~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQME-QPGEYISSVAWIKEGNYLAVGT----SSAEVQLWDVQQQK 180 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECC-STTCCEEEEEECTTSSEEEEEE----TTSCEEEEETTTTE
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEec-CCCCcEEEEEECCCCCEEEEEE----CCCeEEEEEcCCCc
Confidence 3567999976 5888888999999999998766555554 7888899999999999988877 78999999999999
Q ss_pred EEeeec-cCcceeEEEEecceeEEE-ecCeEEEEEccc-ceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEE
Q 018248 88 YLGELS-FRSEVKNVRLRRDRIVVV-LNQKVYVYNFTD-LKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVE 164 (359)
Q Consensus 88 ~~~~~~-~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~ 164 (359)
.+..+. |...+.++.+++.-.... .|+.+++||... ...+..+..|...+..+.+++++.. +++ ++.|+.+++|
T Consensus 181 ~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~--l~s-~~~D~~v~i~ 257 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH--LAS-GGNDNLVNVW 257 (420)
T ss_dssp EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE--EEE-EETTSCEEEE
T ss_pred EEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCe--eee-eeccccceEE
Confidence 999988 889999988875433333 899999999865 4556778889998999999998875 555 5579999998
Q ss_pred ecCC-----eeeEEeecccccccEEEEccCCc-EEEE--EeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCC
Q 018248 165 DYGT-----KKSKYITAHASRIASIAMTLDGR-FVAT--ASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ 236 (359)
Q Consensus 165 ~~~~-----~~~~~~~~~~~~i~~~~~s~~~~-~l~~--~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 236 (359)
+... ..+.....|...|.+++|+|++. ++++ |+.|+. |++||+.+++.+..+.. ...+.++.|+|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t~~~~~~~~~---~~~v~~~~~~~~~~ 333 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVDA---HSQVCSILWSPHYK 333 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTTTEEEEEEEC---SSCEEEEEEETTTT
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCccccceeecc---ccceeeeeecCCCC
Confidence 8764 24566778999999999999765 5554 457999 99999999999988874 35899999999999
Q ss_pred EEEEEc--CCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEee
Q 018248 237 WLAASS--DKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVG 314 (359)
Q Consensus 237 ~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 314 (359)
.|++++ .|+.|+|||+.+++.. ..++.|.+.|.+++
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v------------------------------------------~~l~gH~~~V~~l~ 371 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKV------------------------------------------AELKGHTSRVLSLT 371 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEE------------------------------------------EEECCCSSCEEEEE
T ss_pred eEEEEEecCCCEEEEEECCCCcEE------------------------------------------EEEcCCCCCEEEEE
Confidence 888765 7899999999887621 22556778999999
Q ss_pred ecccCCEEEEEecCCeEEEEEeCC
Q 018248 315 FGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 315 ~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
|+|||++|++|+.||+|++|++..
T Consensus 372 ~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 372 MSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp ECTTSSCEEEEETTTEEEEECCSC
T ss_pred EcCCCCEEEEEecCCeEEEEECCC
Confidence 999999999999999999999864
No 51
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-36 Score=261.75 Aligned_cols=237 Identities=16% Similarity=0.211 Sum_probs=206.2
Q ss_pred CceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 7 ITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
..|.+++|+|+|++|++|+ |+.|++||+++++.. ..+. +|...|..++|+++++.++.++ .|++|++||+.+
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~--~~~~-~h~~~v~~~~~~p~~~~l~s~s----~d~~v~iwd~~~ 196 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIV--MILQ-GHEQDIYSLDYFPSGDKLVSGS----GDRTVRIWDLRT 196 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTT
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE--EEEc-cCCCCEEEEEEcCCCCEEEEec----CCCcEEEEECCC
Confidence 3599999999999999999 999999999976544 4444 8999999999999999888777 789999999999
Q ss_pred ccEEeeeccCcceeEEEEec-ceeEEE---ecCeEEEEEcccceeeeeE-------eccCCCceeeeeecCCCccEEEec
Q 018248 86 NRYLGELSFRSEVKNVRLRR-DRIVVV---LNQKVYVYNFTDLKLVDQI-------ETVVNPTGLCDVSQNAGPMVMACP 154 (359)
Q Consensus 86 ~~~~~~~~~~~~v~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~ 154 (359)
++....+.+...+.+++|+| ++.+++ .|+.|++||+++++.+..+ ..|...+..++|+|+++. +++
T Consensus 197 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~--l~s- 273 (393)
T 1erj_A 197 GQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS--VVS- 273 (393)
T ss_dssp TEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE--EEE-
T ss_pred CeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE--EEE-
Confidence 99998888888999999999 787777 7999999999988877766 457788899999998865 565
Q ss_pred CCCCeeEEEEecCC-------------eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCC
Q 018248 155 GLLKGQVRVEDYGT-------------KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGA 221 (359)
Q Consensus 155 g~~d~~v~~~~~~~-------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~ 221 (359)
|+.|+.|++|+... .....+.+|...|.+++|+|++++|++|+.|+. |++||+++++.+..+.+
T Consensus 274 ~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-v~iwd~~~~~~~~~l~~-- 350 (393)
T 1erj_A 274 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKSGNPLLMLQG-- 350 (393)
T ss_dssp EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-EEEEETTTCCEEEEEEC--
T ss_pred EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe-EEEEECCCCeEEEEECC--
Confidence 66899999998753 234567789999999999999999999999999 99999999999999987
Q ss_pred CCcceEEEEecC------CCCEEEEEcCCCcEEEEEccCCC
Q 018248 222 ERAEIYSLAFSS------NAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 222 ~~~~i~~~~~s~------~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
|...|.+++|++ ++++|++|+.||+|+||+++...
T Consensus 351 h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 351 HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence 778999999876 68899999999999999997643
No 52
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.3e-37 Score=299.14 Aligned_cols=314 Identities=13% Similarity=0.165 Sum_probs=248.8
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|.+.|++++|+|+|++|++|+ |+.|++||+.+++.. ..+. +|...|.+++|+++++.++.++ .|+.|++||
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~--~~~~-~h~~~v~~~~~s~~~~~l~s~~----~d~~v~vwd 685 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL--LDIK-AHEDEVLCCAFSSDDSYIATCS----ADKKVKIWD 685 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEEC-CCSSCEEEEEECTTSSEEEEEE----TTSEEEEEE
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEE--EEec-cCCCCEEEEEEecCCCEEEEEe----CCCeEEEEE
Confidence 6899999999999999999999 999999999987655 4444 8999999999999999988887 789999999
Q ss_pred CCCccEEeeec-cCcceeEEEEecc--eeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRD--RIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGL 156 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~--~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 156 (359)
+.+++.+..+. |...|.+++|+|+ +.+++ .|+.|++||+.+++.+..+..|...+..++|+|+++. +++ ++
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~--l~s-~s 762 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDEL--LAS-CS 762 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTE--EEE-EE
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCE--EEE-EE
Confidence 99999999998 9999999999994 44555 7899999999999999999999999999999998874 555 56
Q ss_pred CCeeEEEEecCCe-eeE------------------------------------------------------E-eeccccc
Q 018248 157 LKGQVRVEDYGTK-KSK------------------------------------------------------Y-ITAHASR 180 (359)
Q Consensus 157 ~d~~v~~~~~~~~-~~~------------------------------------------------------~-~~~~~~~ 180 (359)
.||.|++|+.... ... . ..+|...
T Consensus 763 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 842 (1249)
T 3sfz_A 763 ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHST 842 (1249)
T ss_dssp SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSC
T ss_pred CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCc
Confidence 7999999986432 111 1 1267789
Q ss_pred ccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCC
Q 018248 181 IASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPG 260 (359)
Q Consensus 181 i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 260 (359)
+.+++|+|+++++++++.|+. |++||+.++..+..+.. |...|.+++|+|++++|++++.||.|++|++.+......
T Consensus 843 v~~~~~sp~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~--h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~ 919 (1249)
T 3sfz_A 843 IQYCDFSPYDHLAVIALSQYC-VELWNIDSRLKVADCRG--HLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSA 919 (1249)
T ss_dssp CCEEEECSSTTEEEEECSSSC-EEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCS
T ss_pred eEEEEEcCCCCEEEEEeCCCe-EEEEEcCCCceeeecCC--CccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeee
Confidence 999999999999999999999 99999999999998887 778999999999999999999999999999875322111
Q ss_pred C-----------------------------------------CccccCCCCCccCCCCCceeeeeEeeee--cceEEec-
Q 018248 261 T-----------------------------------------SKLHSASEPNLSSKNSSAISSFRFIRGV--LPKYFSS- 296 (359)
Q Consensus 261 ~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~- 296 (359)
. ....+.++++++. +-..... ....++.
T Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~--------~l~~g~~~g~i~i~d~~ 991 (1249)
T 3sfz_A 920 IVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLE--------YVAFGDEDGAIKIIELP 991 (1249)
T ss_dssp SSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSS--------EEEEEETTSCCEEEETT
T ss_pred ecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCC--------EEEEEcCCCCEEEEEcC
Confidence 1 0111111222110 0000000 0011111
Q ss_pred -ccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 297 -KWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 297 -~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
......+..+.+.|.+++|+|++++|++++.||.|++|++..
T Consensus 992 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 992 NNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp TTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT
T ss_pred CCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 122333455678899999999999999999999999999875
No 53
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-36 Score=251.80 Aligned_cols=246 Identities=11% Similarity=0.147 Sum_probs=200.1
Q ss_pred CCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC--ccEEeeec-cCcceeEEEEecc--eeEEE---ecCeEEEE
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE--NRYLGELS-FRSEVKNVRLRRD--RIVVV---LNQKVYVY 119 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~--~~~~~~~~-~~~~v~~~~~~~~--~~~~~---~d~~i~i~ 119 (359)
+|.+.|..++|+++++.++.++ .|++|++||+.+ .+.+..+. |...|.+++|+++ +.+++ .|++|++|
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s----~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCS----SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEE----TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred CCcCceEEEEECCCCCEEEEEe----CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 8999999999999999988887 799999999874 36677777 9999999999863 66666 79999999
Q ss_pred Ecccce--eeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCe---eeEEeecccccccEEEEccC-----
Q 018248 120 NFTDLK--LVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK---KSKYITAHASRIASIAMTLD----- 189 (359)
Q Consensus 120 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~---~~~~~~~~~~~i~~~~~s~~----- 189 (359)
|+++++ .+..+..|...+..++|+|+....++++ ++.|+.|++|+.+.. ....+.+|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s-~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEE-EECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 998764 5566677888999999999843344665 668999999987653 24567889999999999997
Q ss_pred --------CcEEEEEeCCCCeEEEEEcCCCc----EEEEeecCCCCcceEEEEecCCC---CEEEEEcCCCcEEEEEccC
Q 018248 190 --------GRFVATASSKGTLIRVFNTMDGS----LLQEMRRGAERAEIYSLAFSSNA---QWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 190 --------~~~l~~~~~dg~~i~iwd~~~~~----~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~iw~~~~ 254 (359)
+++|++|+.|+. |++||+++++ ....+.+ |...|.+++|+|++ ++|++++.|++|+|||++.
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~-v~lwd~~~~~~~~~~~~~l~~--H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp --------CCEEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ccCCCCCCcceEEEEcCCCc-EEEEEEcCCCceEEEEEEecC--CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 579999999999 9999998876 5556665 77899999999985 8999999999999999987
Q ss_pred CCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEE
Q 018248 255 DSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKC 334 (359)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~ 334 (359)
..... ....+. ...+.+.+..++|+|++++|++++.||.|++|
T Consensus 239 ~~~~~------------------------------~~~~~~-------~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw 281 (297)
T 2pm7_B 239 EQGPW------------------------------KKTLLK-------EEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (297)
T ss_dssp TTSCC------------------------------EEEESS-------SSCCSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred CCCcc------------------------------ceeeee-------cccCCCcEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 53110 000000 01234678999999999999999999999999
Q ss_pred EeCC
Q 018248 335 EFDP 338 (359)
Q Consensus 335 ~~~~ 338 (359)
+...
T Consensus 282 ~~~~ 285 (297)
T 2pm7_B 282 KENL 285 (297)
T ss_dssp EECT
T ss_pred EECC
Confidence 9875
No 54
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.1e-37 Score=259.08 Aligned_cols=244 Identities=16% Similarity=0.190 Sum_probs=195.9
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEecc--CCEEEEEecCCCCCCeEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFR--SNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~~~~d~~i~ 79 (359)
..|.+.|++++|+|+|++||+|+ |+.|+|||+.+++......+. +|.+.|..++|++. ++.++.++ .|++|+
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~-gH~~~V~~v~~~~~~~~~~l~s~s----~D~~v~ 84 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR-GHEGPVWQVAWAHPMYGNILASCS----YDRKVI 84 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE-CCSSCEEEEEECCGGGSSCEEEEE----TTSCEE
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc-CCCccEEEEEeCCCCCCCEEEEEE----CCCEEE
Confidence 46999999999999999999999 999999999876554445666 89999999999753 67777776 789999
Q ss_pred EEECCCcc--EEeeec-cCcceeEEEEecc--eeEEE---ecCeEEEEEcccce---eeeeEeccCCCceeeeeecCCC-
Q 018248 80 IWDDHENR--YLGELS-FRSEVKNVRLRRD--RIVVV---LNQKVYVYNFTDLK---LVDQIETVVNPTGLCDVSQNAG- 147 (359)
Q Consensus 80 iwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~---~d~~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~- 147 (359)
+||+.+++ .+..+. |...|.+++|+|+ +.+++ .|+.|++||++.+. ....+..|...+..++|+|+..
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 99998874 555565 8899999999997 66666 89999999997653 2344566777888899988731
Q ss_pred --------------ccEEEecCCCCeeEEEEecCC----eeeEEeecccccccEEEEccCC----cEEEEEeCCCCeEEE
Q 018248 148 --------------PMVMACPGLLKGQVRVEDYGT----KKSKYITAHASRIASIAMTLDG----RFVATASSKGTLIRV 205 (359)
Q Consensus 148 --------------~~~l~~~g~~d~~v~~~~~~~----~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~~i~i 205 (359)
..++++ |+.|+.|++|+.+. .....+.+|...|.+++|+|++ ++|++++.|+. |++
T Consensus 165 ~~~~~~~~~~~~~~~~~l~s-gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~-v~i 242 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFAS-GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR-VFI 242 (316)
T ss_dssp ------CCSCCCCCCCBEEC-CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE-EEE
T ss_pred ccccccccccCccccceEEE-ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCe-EEE
Confidence 134665 77899999998764 3566788999999999999987 79999999999 999
Q ss_pred EEcCCCc----EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 018248 206 FNTMDGS----LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 206 wd~~~~~----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 255 (359)
||+.+.. ....+.. |...|.+++|+|++++|++++.|++|+||+....
T Consensus 243 w~~~~~~~~~~~~~~~~~--~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 243 WTCDDASSNTWSPKLLHK--FNDVVWHVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp EECSSTTCCCCBCCEEEE--CSSCEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred EEccCccccchhhhhhhc--CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 9987631 1122333 5679999999999999999999999999998743
No 55
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8e-37 Score=268.19 Aligned_cols=242 Identities=11% Similarity=0.197 Sum_probs=193.7
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcc---------eeeeecccCCC------------CceeEEEEecc
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKP---------IMRRDFDRNPR------------GGTQLVSMLFR 61 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~---------~~~~~~~~~h~------------~~v~~~~~~~~ 61 (359)
.+.+.|++++|+|+|++||+|+ |+.|+||++.+++. .....+. +|. ..|..++|+++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEcCC
Confidence 4678999999999999999999 99999999986552 1234555 788 88999999998
Q ss_pred C--CEEEEEecCCCCCCeEEEEECCCccEE---------------------------------------eee--ccCcce
Q 018248 62 S--NIICLVNSGPHQSNKVMIWDDHENRYL---------------------------------------GEL--SFRSEV 98 (359)
Q Consensus 62 ~--~~~~~~~~~~~~d~~i~iwd~~~~~~~---------------------------------------~~~--~~~~~v 98 (359)
+ ..++.++ .|+.|++||+.+++.. ..+ .|...|
T Consensus 105 ~~~~~l~s~s----~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 105 KNAAQFLLST----NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp CSSSEEEEEE----CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred CCcceEEEeC----CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 7 5677666 7899999998765432 122 388999
Q ss_pred eEEEEecceeEEE--ecCeEEEEEccc-ceeee-------eEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCC
Q 018248 99 KNVRLRRDRIVVV--LNQKVYVYNFTD-LKLVD-------QIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT 168 (359)
Q Consensus 99 ~~~~~~~~~~~~~--~d~~i~i~d~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~ 168 (359)
.+++|+|++.+++ .|+.|++||+++ ++.+. .+..|...+..++|+|++.. ++++ |+.||.|++|+.+.
T Consensus 181 ~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s-~~~dg~i~iwd~~~ 258 (447)
T 3dw8_B 181 NSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN-TFVY-SSSKGTIRLCDMRA 258 (447)
T ss_dssp CEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT-EEEE-EETTSCEEEEETTT
T ss_pred EEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc-EEEE-EeCCCeEEEEECcC
Confidence 9999999998888 899999999974 44444 24567888999999998733 2444 66799999999876
Q ss_pred ee-----eEEeecccc------------cccEEEEccCCcEEEEEeCCCCeEEEEEcCC-CcEEEEeecCCCCc------
Q 018248 169 KK-----SKYITAHAS------------RIASIAMTLDGRFVATASSKGTLIRVFNTMD-GSLLQEMRRGAERA------ 224 (359)
Q Consensus 169 ~~-----~~~~~~~~~------------~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~-~~~~~~~~~~~~~~------ 224 (359)
.. ...+..|.. .|.+++|+|++++|++++. +. |++||+++ ++.+..+.. |..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~-v~iwd~~~~~~~~~~~~~--~~~~~~~l~ 334 (447)
T 3dw8_B 259 SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS-VKVWDLNMENRPVETYQV--HEYLRSKLC 334 (447)
T ss_dssp CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE-EEEEETTCCSSCSCCEES--CGGGTTTHH
T ss_pred CccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce-EEEEeCCCCccccceeec--ccccccccc
Confidence 44 577887776 8999999999999999999 98 99999997 887777776 322
Q ss_pred ---------ceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 225 ---------EIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 225 ---------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
.+..++|+|++++|++++.||.|++||+.+++
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred ccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence 13459999999999999999999999999876
No 56
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.4e-36 Score=257.15 Aligned_cols=278 Identities=12% Similarity=0.057 Sum_probs=225.2
Q ss_pred CCCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcce-eeeecccCCCCceeEEEEeccCC-EEEEEecCCCCCCeE
Q 018248 2 NQPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPI-MRRDFDRNPRGGTQLVSMLFRSN-IICLVNSGPHQSNKV 78 (359)
Q Consensus 2 ~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~-~~~~~~~~~~~d~~i 78 (359)
.++|.+.|.+++|+|++++|++++ |+.|++|++.+++.. ....+. +|...+..++|+++++ .++.++ .|+.|
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~----~dg~i 81 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGT----VQGEI 81 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEE----TTSCE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEc----CCCeE
Confidence 468999999999999999999999 999999999876521 112222 6899999999999988 787777 68999
Q ss_pred EEEEC-CCccEEeeec--cCcceeEEEEecceeEEE---ecCeEEEEEccc---------ceeeeeEeccCCCceeeeee
Q 018248 79 MIWDD-HENRYLGELS--FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTD---------LKLVDQIETVVNPTGLCDVS 143 (359)
Q Consensus 79 ~iwd~-~~~~~~~~~~--~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~~~~ 143 (359)
++||+ .+++...... |...|.+++|+| +..++ .|+.|++||+++ ++.+..+. +...+..++++
T Consensus 82 ~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 159 (342)
T 1yfq_A 82 LKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTN 159 (342)
T ss_dssp EEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEEC
T ss_pred EEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEec
Confidence 99999 8887765556 889999999999 66655 899999999987 77676666 67778888888
Q ss_pred cCCCccEEEecCCCCeeEEEEecCC---e-eeEEeecccccccEEEEcc-CCcEEEEEeCCCCeEEEEEcCCC------c
Q 018248 144 QNAGPMVMACPGLLKGQVRVEDYGT---K-KSKYITAHASRIASIAMTL-DGRFVATASSKGTLIRVFNTMDG------S 212 (359)
Q Consensus 144 ~~~~~~~l~~~g~~d~~v~~~~~~~---~-~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~~i~iwd~~~~------~ 212 (359)
++. +++ ++.++.|++|+... . .......|...+.+++|+| +++++++++.||. |++|++... +
T Consensus 160 ~~~----l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 160 SSR----LIV-GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR-VAVEFFDDQGDDYNSS 233 (342)
T ss_dssp SSE----EEE-EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE-EEEEECCTTCCSTTCT
T ss_pred CCc----EEE-EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc-EEEEEEcCCCcccccc
Confidence 765 444 45799999999876 2 2234456888999999999 9999999999999 999999876 7
Q ss_pred EEEEeecCC-------CCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeE
Q 018248 213 LLQEMRRGA-------ERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRF 285 (359)
Q Consensus 213 ~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (359)
....+..+. |...|.+++|+|++++|++++.||.|++||+.+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~--------------------------- 286 (342)
T 1yfq_A 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI--------------------------- 286 (342)
T ss_dssp TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE---------------------------
T ss_pred cceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh---------------------------
Confidence 777777631 1349999999999999999999999999999886511
Q ss_pred eeeecceEEecccceeEEeec-CCcEEEeeecccCCEEEEEecCCe-EEEEEe
Q 018248 286 IRGVLPKYFSSKWSMAQFRLP-ENVQYLVGFGRQNNTIVIVGLDGS-YYKCEF 336 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~-i~v~~~ 336 (359)
..+..+ .+.|.+++ |++++|++++.||. .+.|..
T Consensus 287 ---------------~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 287 ---------------KNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp ---------------EECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred ---------------hhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 112334 56788888 99999999999999 665553
No 57
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=256.10 Aligned_cols=246 Identities=16% Similarity=0.188 Sum_probs=200.5
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
..|...|.+++|+|+|++|++|+ |+.+++|+.+.........+. +|...|..++|+++++.++.++ .|+.|++|
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s----~D~~v~iw 132 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCS----RDKSVWVW 132 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEE----TTSCEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEE----CCCeEEEE
Confidence 46899999999999999999999 999999999876555556666 8999999999999999988888 78999999
Q ss_pred ECCCcc---EEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccce--eeeeEeccCCCceeeeeecCCCccEEE
Q 018248 82 DDHENR---YLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLK--LVDQIETVVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 82 d~~~~~---~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (359)
|+.+++ .+..+. |...|.+++|+|++.+++ .|+.|++||+++++ ....+.+|...+..++|+|+++. |+
T Consensus 133 d~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~--l~ 210 (345)
T 3fm0_A 133 EVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR--LA 210 (345)
T ss_dssp EECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSE--EE
T ss_pred ECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCE--EE
Confidence 998764 345555 889999999999998887 79999999997765 45677889999999999998865 66
Q ss_pred ecCCCCeeEEEEecCC----------------eeeEEeec-ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc---
Q 018248 153 CPGLLKGQVRVEDYGT----------------KKSKYITA-HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGS--- 212 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~----------------~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~--- 212 (359)
+ |+.|+.|++|+... ..+..+.+ |...|.+++|+|++..|++++.|+. |++|+...+.
T Consensus 211 s-~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~vw~~~~~~~~~ 288 (345)
T 3fm0_A 211 S-CSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-IRVFQEDPNSDPQ 288 (345)
T ss_dssp E-EETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-EEEEEECTTSCTT
T ss_pred E-EeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-EEEEEeCCCCCcc
Confidence 5 66899999997421 12333444 8889999999999999999999999 9999987542
Q ss_pred -E----EEEeecCCCCcceEEEEecCCC-CEEEEEcCCCcEEEEEccCCCCC
Q 018248 213 -L----LQEMRRGAERAEIYSLAFSSNA-QWLAASSDKGTVHVFGLKVDSGS 258 (359)
Q Consensus 213 -~----~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~ 258 (359)
. ..... ..|...|++++|+|++ .+|++++.||+|++|++.++++.
T Consensus 289 ~~~~~~~~~~~-~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 289 QPTFSLTAHLH-QAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp SCCEEEEEEET-TSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred eeeEEEEeeec-ccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 1 11111 2377899999999998 59999999999999999987743
No 58
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-36 Score=254.00 Aligned_cols=241 Identities=16% Similarity=0.274 Sum_probs=189.4
Q ss_pred CCCceEEEEEccCCCEEEEec-CCceEEEEcCCCc-----ceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeE
Q 018248 5 DPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYK-----PIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKV 78 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i 78 (359)
|...|.+++|+|++++|++|+ |+.|+||+++... ......+. +|...|..++|+++++.++.++ .|+.|
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~las~s----~D~~v 131 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE-GHENEVKGVAWSNDGYYLATCS----RDKSV 131 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEE----TTSCE
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc-CCCCcEEEEEECCCCCEEEEEe----CCCEE
Confidence 899999999999999999999 9999999986321 22334454 8999999999999999888887 79999
Q ss_pred EEEECCCc----cEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccc--eeeeeEeccCCCceeeeeecCCCc
Q 018248 79 MIWDDHEN----RYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDL--KLVDQIETVVNPTGLCDVSQNAGP 148 (359)
Q Consensus 79 ~iwd~~~~----~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 148 (359)
++||+... +++..+. |...|.+++|+|++.+++ .|++|++||..++ +++..+.+|...+..++|+|++..
T Consensus 132 ~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 211 (330)
T 2hes_X 132 WIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGV 211 (330)
T ss_dssp EEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSS
T ss_pred EEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCe
Confidence 99998432 4566666 889999999999998887 7999999998765 677888899999999999998655
Q ss_pred cEEEecCCCCeeEEEEecCCe---------eeEEeec-ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc--EEEE
Q 018248 149 MVMACPGLLKGQVRVEDYGTK---------KSKYITA-HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGS--LLQE 216 (359)
Q Consensus 149 ~~l~~~g~~d~~v~~~~~~~~---------~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~--~~~~ 216 (359)
..+++ |+.|+.|++|+.... ....+.. |...|.+++|++++ +|++++.||. |++||..+++ ....
T Consensus 212 ~~l~s-~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-v~iw~~~~~~~~~~~~ 288 (330)
T 2hes_X 212 FRLCS-GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-LAVYEEVDGEWKVFAK 288 (330)
T ss_dssp CEEEE-EETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-EEEEEEETTEEEEEEE
T ss_pred eEEEE-EeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-EEEEEcCCCceEEEec
Confidence 55776 668999999987542 3334444 89999999999766 7899999999 9999998874 2333
Q ss_pred eecCCCCc-ceEEEEecC--CCCEEEEEcCCCcEEEEEccC
Q 018248 217 MRRGAERA-EIYSLAFSS--NAQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 217 ~~~~~~~~-~i~~~~~s~--~~~~l~~~~~dg~i~iw~~~~ 254 (359)
.. ..|.. .|.+++|+| ++++|++++.||+|+||+++.
T Consensus 289 ~~-~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 289 RA-LCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ES-CTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cc-cccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 32 22555 899999999 789999999999999999875
No 59
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.5e-36 Score=249.70 Aligned_cols=244 Identities=10% Similarity=0.189 Sum_probs=208.5
Q ss_pred eeeeecccCCCCceeEEEEeccC-CEEEEEecCCCCCCeEEEEECCC-----ccEEeeec-cCcceeEEEEecceeEEE-
Q 018248 40 IMRRDFDRNPRGGTQLVSMLFRS-NIICLVNSGPHQSNKVMIWDDHE-----NRYLGELS-FRSEVKNVRLRRDRIVVV- 111 (359)
Q Consensus 40 ~~~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~~~~d~~i~iwd~~~-----~~~~~~~~-~~~~v~~~~~~~~~~~~~- 111 (359)
.+...+. ||.+.|..++++++. +.++.++ .|++|++|++.. +.++..+. |...|.+++|+|++.+++
T Consensus 8 ~l~~~l~-gH~~~V~~l~~~~~~~~~l~s~s----~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 82 (319)
T 3frx_A 8 VLRGTLE-GHNGWVTSLATSAGQPNLLLSAS----RDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALS 82 (319)
T ss_dssp EEEEEEC-CCSSCEEEEEECSSCTTEEEEEE----TTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred EEEEEEc-cccceEEEEEccCCCccEEEEec----CCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEE
Confidence 3345565 999999999999865 6677666 799999999764 34566666 899999999999998887
Q ss_pred --ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEccC
Q 018248 112 --LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLD 189 (359)
Q Consensus 112 --~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 189 (359)
.|++|++||+.+++.+..+.+|...+..++++|++.. +++ |+.|+.|++|+.++..+..+.+|...|.+++|+|.
T Consensus 83 ~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~s-~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 83 ASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASM--IIS-GSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCE--EEE-EETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC
T ss_pred EeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCE--EEE-EeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccC
Confidence 7999999999999999999999999999999998764 555 66899999999999999999999999999999985
Q ss_pred ------CcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCc
Q 018248 190 ------GRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSK 263 (359)
Q Consensus 190 ------~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 263 (359)
+..|++++.|+. |++||+++++....+.+ |...|.+++|+|++++|++++.||.|+|||+.+++..
T Consensus 160 ~~~~~~~~~l~s~~~d~~-i~~wd~~~~~~~~~~~~--h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~----- 231 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKM-VKAWNLNQFQIEADFIG--HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM----- 231 (319)
T ss_dssp ------CCEEEEEETTSC-EEEEETTTTEEEEEECC--CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE-----
T ss_pred CCCCCCccEEEEEeCCCE-EEEEECCcchhheeecC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-----
Confidence 448999999999 99999999998888876 7789999999999999999999999999999886511
Q ss_pred cccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 264 LHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
.. +. ..+.+..++|+|++..|++++.++ +++|++++
T Consensus 232 ----------------------------~~---------~~-~~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~ 267 (319)
T 3frx_A 232 ----------------------------YT---------LS-AQDEVFSLAFSPNRYWLAAATATG-IKVFSLDP 267 (319)
T ss_dssp ----------------------------EE---------EE-CCSCEEEEEECSSSSEEEEEETTE-EEEEEETT
T ss_pred ----------------------------EE---------ec-CCCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCc
Confidence 00 11 124688999999999999887665 99999875
No 60
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.5e-36 Score=254.93 Aligned_cols=236 Identities=16% Similarity=0.169 Sum_probs=203.4
Q ss_pred CCCceEEEEEccCCCEEEEec-CCceEEEEcCCCc----ceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEE
Q 018248 5 DPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYK----PIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~ 79 (359)
|...|.+++|+|+|.+|++|+ |+.+++|++.... ......+. +|...+..++|++++..++.++ .|++|+
T Consensus 105 ~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s----~D~~v~ 179 (354)
T 2pbi_B 105 PCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTAS----GDGTCA 179 (354)
T ss_dssp SSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEE----TTSEEE
T ss_pred CCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEe----CCCcEE
Confidence 567899999999999999999 9999999986432 11223333 7999999999999998888877 789999
Q ss_pred EEECCCccEEeeec-cCcceeEEEEec--ceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEe
Q 018248 80 IWDDHENRYLGELS-FRSEVKNVRLRR--DRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 80 iwd~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
+||+.+++.+..+. |...|.+++++| ++..++ .|+.|++||+++++.+..+..|...+..++|+|+++. +++
T Consensus 180 lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~--l~s 257 (354)
T 2pbi_B 180 LWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDA--FAS 257 (354)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE--EEE
T ss_pred EEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCE--EEE
Confidence 99999999999998 899999999987 456666 7999999999999999999999999999999998864 565
Q ss_pred cCCCCeeEEEEecCCe-eeEEeec--ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEE
Q 018248 154 PGLLKGQVRVEDYGTK-KSKYITA--HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLA 230 (359)
Q Consensus 154 ~g~~d~~v~~~~~~~~-~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 230 (359)
|+.|+.|++|+.+.. .+..+.. +...+.+++|+|++++|++|+.|+. |++||+.+++.+..+.+ |...|++++
T Consensus 258 -~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~l~~--h~~~v~~l~ 333 (354)
T 2pbi_B 258 -GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-INVWDVLKGSRVSILFG--HENRVSTLR 333 (354)
T ss_dssp -EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCSEEEEECC--CSSCEEEEE
T ss_pred -EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-EEEEECCCCceEEEEEC--CCCcEEEEE
Confidence 668999999998764 3444433 2347889999999999999999999 99999999999988876 778999999
Q ss_pred ecCCCCEEEEEcCCCcEEEEE
Q 018248 231 FSSNAQWLAASSDKGTVHVFG 251 (359)
Q Consensus 231 ~s~~~~~l~~~~~dg~i~iw~ 251 (359)
|+|+|++|++++.|++|+||+
T Consensus 334 ~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 334 VSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999996
No 61
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.3e-36 Score=280.64 Aligned_cols=280 Identities=11% Similarity=0.167 Sum_probs=236.7
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|.+.|.+++|+|+|++|++|+ ||.|+|||+.+++.. ..+. +|...+..++|+++++.+++++ .|+.|++||
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~--~~~~-~~~~~v~~~~~s~~~~~l~~~~----~dg~i~vw~ 83 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEV--RSIQ-VTETPVRAGKFIARKNWIIVGS----DDFRIRVFN 83 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEEEGGGTEEEEEE----TTSEEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceE--EEEe-cCCCcEEEEEEeCCCCEEEEEe----CCCeEEEEE
Confidence 5889999999999999999999 999999999886655 3444 7899999999999999998888 789999999
Q ss_pred CCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccc-eeeeeEeccCCCceeeeeec-CCCccEEEecCC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDL-KLVDQIETVVNPTGLCDVSQ-NAGPMVMACPGL 156 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~g~ 156 (359)
+.+++.+..+. |...|.+++|+|++..++ .|+.|++||+.++ .....+..|...+..++|+| ++.. +++ ++
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~--l~~-~~ 160 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST--FAS-GC 160 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEE--EEE-EE
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCE--EEE-Ee
Confidence 99999999988 999999999999998777 7899999999876 67778888999999999999 5443 444 55
Q ss_pred CCeeEEEEecCC-eeeEEeecc-cccccEEEEcc--CCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEec
Q 018248 157 LKGQVRVEDYGT-KKSKYITAH-ASRIASIAMTL--DGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFS 232 (359)
Q Consensus 157 ~d~~v~~~~~~~-~~~~~~~~~-~~~i~~~~~s~--~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s 232 (359)
.||.|++|+... .....+..+ ...+.+++|+| ++.+|++++.||. |++||+.+++.+..+.. |...|.+++|+
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~--~~~~v~~~~~~ 237 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEG--HMSNVSFAVFH 237 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE-EEEEETTTTEEEEEEEC--CSSCEEEEEEC
T ss_pred CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE-EEEEECCCCcEEEEEcC--CCCCEEEEEEc
Confidence 799999998754 445555544 48999999999 9999999999999 99999999999998886 67899999999
Q ss_pred CCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEE
Q 018248 233 SNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYL 312 (359)
Q Consensus 233 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (359)
|++++|++++.||.|++||+.+++.. ..+..+.+.+.+
T Consensus 238 ~~~~~l~~~~~dg~v~vwd~~~~~~~------------------------------------------~~~~~~~~~v~~ 275 (814)
T 3mkq_A 238 PTLPIIISGSEDGTLKIWNSSTYKVE------------------------------------------KTLNVGLERSWC 275 (814)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCSEE------------------------------------------EEECCSSSSEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEE------------------------------------------EEeecCCCcEEE
Confidence 99999999999999999999886511 113344568899
Q ss_pred eeecccCCE-EEEEecCCeEEEEEeCC
Q 018248 313 VGFGRQNNT-IVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 313 ~~~s~~~~~-l~~~~~dg~i~v~~~~~ 338 (359)
++|+|+++. +++++.++.+.+|++..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 276 IATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp EEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred EEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 999999864 35555667788888754
No 62
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-36 Score=280.91 Aligned_cols=199 Identities=8% Similarity=0.064 Sum_probs=165.8
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|++++|+|++++||+|+ |+.|+||+....+.. ..+ .|...|..++|++ +..++.++ .|++|++||
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~--~~~--~~~~~V~~l~fsp-g~~L~S~s----~D~~v~lWd 85 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVV--IKL--EDRSAIKEMRFVK-GIYLVVIN----AKDTVYVLS 85 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEE--EEC--SSCCCEEEEEEET-TTEEEEEE----TTCEEEEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEE--EEc--CCCCCEEEEEEcC-CCEEEEEE----CcCeEEEEE
Confidence 4789999999999999999999 999999998764433 333 4788999999999 66666666 789999999
Q ss_pred CCCccEEeeeccCcceeEEEEecceeEEE---ecCeEEEEEcccceee-----------eeEeccCCCceeeeeecCCCc
Q 018248 83 DHENRYLGELSFRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLV-----------DQIETVVNPTGLCDVSQNAGP 148 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 148 (359)
+.+++.+..+.+...|.+++|+|++.+++ .||.|++||+++++.. ..+..|...+..++|+|++..
T Consensus 86 ~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~ 165 (902)
T 2oaj_A 86 LYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIG 165 (902)
T ss_dssp TTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEE
T ss_pred CCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCC
Confidence 99999999998888999999999999888 8999999999887753 223457788999999997543
Q ss_pred cEEEecCCCCeeEEEEecCC-eeeEEeecc------------------cccccEEEEccCCcEEEEEeCCCCeEEEEEcC
Q 018248 149 MVMACPGLLKGQVRVEDYGT-KKSKYITAH------------------ASRIASIAMTLDGRFVATASSKGTLIRVFNTM 209 (359)
Q Consensus 149 ~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~------------------~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~ 209 (359)
. +++ |+.|+.| +|+... +.++.+..| ...|.+++|+|+|++|++++.|+. |++||++
T Consensus 166 ~-l~~-g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~-i~lWd~~ 241 (902)
T 2oaj_A 166 T-VLI-SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS-LVFWDAN 241 (902)
T ss_dssp E-EEE-ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC-EEEEETT
T ss_pred E-EEE-EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe-EEEEECC
Confidence 2 444 6689999 999875 445555544 577999999999999999999999 9999998
Q ss_pred CCcEEE
Q 018248 210 DGSLLQ 215 (359)
Q Consensus 210 ~~~~~~ 215 (359)
+++++.
T Consensus 242 ~g~~~~ 247 (902)
T 2oaj_A 242 SGHMIM 247 (902)
T ss_dssp TCCEEE
T ss_pred CCcEEE
Confidence 887664
No 63
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=257.19 Aligned_cols=288 Identities=11% Similarity=0.060 Sum_probs=229.1
Q ss_pred CCCCCceEEEEEcc-CCCEEEEec-CCceEEEEcCCCcceeeeecc----------cCCCCceeEEEEec-cCCEEEEEe
Q 018248 3 QPDPITIHHLALNQ-DHGCFATGT-ETGFRVYLSDPYKPIMRRDFD----------RNPRGGTQLVSMLF-RSNIICLVN 69 (359)
Q Consensus 3 ~~h~~~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~----------~~h~~~v~~~~~~~-~~~~~~~~~ 69 (359)
..|.+.|.+++|+| ++++|++|+ |+.|++|++++++........ .+|...+..++|++ ++..++.++
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 45999999999999 999999999 999999999976554332211 15899999999999 556777666
Q ss_pred cCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecce---eEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeee
Q 018248 70 SGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDR---IVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVS 143 (359)
Q Consensus 70 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 143 (359)
.|+.|++||+.+++.+..+.+...+.++.++|.+ .+++ .++.|++||+++++.+..+..|...+..++|+
T Consensus 120 ----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 120 ----FDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWS 195 (408)
T ss_dssp ----TTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEEC
T ss_pred ----CCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEEC
Confidence 6899999999999999999999999999999854 3555 89999999999999999999999999999999
Q ss_pred cCCCccEEEecCCCCeeEEEEecCCe--eeEEe---------------ecccccccEEEEccCCcEEEEEeCCCCeEEEE
Q 018248 144 QNAGPMVMACPGLLKGQVRVEDYGTK--KSKYI---------------TAHASRIASIAMTLDGRFVATASSKGTLIRVF 206 (359)
Q Consensus 144 ~~~~~~~l~~~g~~d~~v~~~~~~~~--~~~~~---------------~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iw 206 (359)
|+++.+ +++ ++.||.|++|+.+.. ....+ ..|...|.+++|+|++++|++++.|+. |++|
T Consensus 196 ~~~~~l-l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~vw 272 (408)
T 4a11_B 196 PRYDYI-LAT-ASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR-MRLW 272 (408)
T ss_dssp SSCTTE-EEE-EETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC-EEEE
T ss_pred CCCCcE-EEE-EcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe-EEEE
Confidence 998753 333 567999999988642 33333 568889999999999999999999999 9999
Q ss_pred EcCCCcEEEEeecCCC---CcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeee
Q 018248 207 NTMDGSLLQEMRRGAE---RAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSF 283 (359)
Q Consensus 207 d~~~~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (359)
|+.+++....+..... ...+........+..+++++.++.|++||+.+++..
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~------------------------- 327 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI------------------------- 327 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE-------------------------
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce-------------------------
Confidence 9999876554432111 112222222334556667788999999999887621
Q ss_pred eEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCCC
Q 018248 284 RFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDPM 339 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~ 339 (359)
..+..+.+.|.+++|+|++++|++++.||.|++|++...
T Consensus 328 -----------------~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 328 -----------------TMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp -----------------EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred -----------------eeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 123446678999999999999999999999999999863
No 64
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.3e-35 Score=244.07 Aligned_cols=275 Identities=11% Similarity=0.122 Sum_probs=223.4
Q ss_pred eEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccE
Q 018248 9 IHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRY 88 (359)
Q Consensus 9 v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 88 (359)
.++|+||+++ +||+|.|++|+|||+++++......+. +|...|.+++++++++.++.++ .|+.|++||+.+++.
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~-~~~~~V~~v~~~~~~~~l~sgs----~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQME-QPGEYISSVAWIKEGNYLAVGT----SSAEVQLWDVQQQKR 101 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECC-STTCCEEEEEECTTSSEEEEEE----TTSEEEEEETTTTEE
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEec-CCCCeEEEEEECCCCCEEEEEE----CCCcEEEeecCCcee
Confidence 4679999986 888888999999999988766555554 7888899999999999988877 799999999999999
Q ss_pred Eeeec-cCcceeEEEEecceeEEE-ecCeEEEEEcccc-eeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEe
Q 018248 89 LGELS-FRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDL-KLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVED 165 (359)
Q Consensus 89 ~~~~~-~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~ 165 (359)
+..+. |...+.++.+.+...... .++.+++|+.... ..+..+..|...+..+.+.++++. +++ ++.|+.|++|+
T Consensus 102 ~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~s-~~~d~~i~iwd 178 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH--LAS-GGNDNLVNVWP 178 (318)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE--EEE-EETTSCEEEEE
T ss_pred EEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCE--EEE-EecCcceeEEE
Confidence 99988 888887776655433333 8899999998654 556677888888888888888765 555 66799999998
Q ss_pred cCCe-----eeEEeecccccccEEEEccCCcE---EEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCE
Q 018248 166 YGTK-----KSKYITAHASRIASIAMTLDGRF---VATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQW 237 (359)
Q Consensus 166 ~~~~-----~~~~~~~~~~~i~~~~~s~~~~~---l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 237 (359)
.... .......+...|.+++++|++.. +++++.++. |++||.+......... +...+..+.|+|+++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-i~lwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~ 254 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVD---AHSQVCSILWSPHYKE 254 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE-EEEEETTTCCEEEEEE---CSSCEEEEEEETTTTE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCE-EEEEeccccccccccc---ceeeeeeeeecccccc
Confidence 7642 34556678889999999997763 346678888 9999999988877665 4568999999999998
Q ss_pred EEEEc--CCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeee
Q 018248 238 LAASS--DKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGF 315 (359)
Q Consensus 238 l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 315 (359)
+++++ .|+.|+|||+++++.. ..++.|.+.|++++|
T Consensus 255 ~~~~sg~~d~~i~iwd~~~~~~~------------------------------------------~~l~gH~~~V~~l~~ 292 (318)
T 4ggc_A 255 LISGHGFAQNQLVIWKYPTMAKV------------------------------------------AELKGHTSRVLSLTM 292 (318)
T ss_dssp EEEEECTTTCCEEEEETTTCCEE------------------------------------------EEECCCSSCEEEEEE
T ss_pred eEEEEEcCCCEEEEEECCCCcEE------------------------------------------EEEcCCCCCEEEEEE
Confidence 87654 7999999999887621 124557789999999
Q ss_pred cccCCEEEEEecCCeEEEEEeCC
Q 018248 316 GRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 316 s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
+||+++|++|+.||+|++|++..
T Consensus 293 spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 293 SPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CTTSSCEEEEETTTEEEEECCSC
T ss_pred cCCCCEEEEEecCCeEEEEECCC
Confidence 99999999999999999998854
No 65
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=254.28 Aligned_cols=281 Identities=11% Similarity=0.068 Sum_probs=222.3
Q ss_pred CCCCCceEEEEEccC---CCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeE
Q 018248 3 QPDPITIHHLALNQD---HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKV 78 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~---g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i 78 (359)
..|.+.|++++|+|+ |++|++|+ |+.|++|++++........+. +|...+..++|+++++.++.++ .|+.|
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~----~dg~v 110 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ-MHTGPVLDVCWSDDGSKVFTAS----CDKTA 110 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE-ECSSCEEEEEECTTSSEEEEEE----TTSEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec-cccCCEEEEEECcCCCEEEEEc----CCCcE
Confidence 579999999999999 69999999 999999999974444434444 7999999999999999888877 78999
Q ss_pred EEEECCCccEEeeeccCcceeEEEE--ecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEe
Q 018248 79 MIWDDHENRYLGELSFRSEVKNVRL--RRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 79 ~iwd~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
++||+.+++.+....|...|.+++| +|++.+++ .|+.|++||+++++.+..+..+. . ..++.+.....++
T Consensus 111 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~-- 185 (368)
T 3mmy_A 111 KMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-R--CYCADVIYPMAVV-- 185 (368)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-C--EEEEEEETTEEEE--
T ss_pred EEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-C--ceEEEecCCeeEE--
Confidence 9999999998887779999999999 88888776 79999999999999888887654 2 3344444444333
Q ss_pred cCCCCeeEEEEecCCeeeE--Ee-ecccccccEEEEccCCcE----EEEEeCCCCeEEEEEcCCC---cEEEEeecCCCC
Q 018248 154 PGLLKGQVRVEDYGTKKSK--YI-TAHASRIASIAMTLDGRF----VATASSKGTLIRVFNTMDG---SLLQEMRRGAER 223 (359)
Q Consensus 154 ~g~~d~~v~~~~~~~~~~~--~~-~~~~~~i~~~~~s~~~~~----l~~~~~dg~~i~iwd~~~~---~~~~~~~~~~~~ 223 (359)
+..++.+.+|+....... .. ..+...+.++++.++... +++++.|+. |++||++.. +.+..+.. |.
T Consensus 186 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-i~i~~~~~~~~~~~~~~~~~--~~ 261 (368)
T 3mmy_A 186 -ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR-VAIHYINPPNPAKDNFTFKC--HR 261 (368)
T ss_dssp -EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE-EEEEESSCSCHHHHSEEEEC--SE
T ss_pred -EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc-EEEEecCCCCccccceeeee--ee
Confidence 336889999888764322 21 233455667777665544 999999999 999999887 45566665 33
Q ss_pred c------------ceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecc
Q 018248 224 A------------EIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLP 291 (359)
Q Consensus 224 ~------------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (359)
. .|++++|+|++++|++++.||.|++||+++++..
T Consensus 262 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~--------------------------------- 308 (368)
T 3mmy_A 262 SNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL--------------------------------- 308 (368)
T ss_dssp EC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE---------------------------------
T ss_pred cccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEE---------------------------------
Confidence 3 6999999999999999999999999999976511
Q ss_pred eEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCCC
Q 018248 292 KYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDPM 339 (359)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~ 339 (359)
..+..+.+.|..++|+|++++|++++.||..+.|++...
T Consensus 309 ---------~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 309 ---------KTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp ---------EECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCT
T ss_pred ---------EEecCCCCCceEEEECCCCCeEEEEecccccccccccCC
Confidence 113345678999999999999999999997777765543
No 66
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.4e-36 Score=252.72 Aligned_cols=245 Identities=13% Similarity=0.166 Sum_probs=197.0
Q ss_pred CCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc--EEeeec-cCcceeEEEEec--ceeEEE---ecCeEEEE
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR--YLGELS-FRSEVKNVRLRR--DRIVVV---LNQKVYVY 119 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~--~~~~~~---~d~~i~i~ 119 (359)
+|.+.|..++|+++++.++.++ .|++|++||+.+++ .+..+. |...|.+++|++ ++.+++ .|++|++|
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs----~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCS----SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEE----TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred cccCeEEEeeEcCCCCEEEEEe----CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 8999999999999999988887 79999999998764 456666 999999999975 366666 79999999
Q ss_pred Ecccc--eeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCee----eEEeecccccccEEEEccC----
Q 018248 120 NFTDL--KLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKK----SKYITAHASRIASIAMTLD---- 189 (359)
Q Consensus 120 d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~----~~~~~~~~~~i~~~~~s~~---- 189 (359)
|++++ +....+..|...+..++|+|+....++++ |+.|+.|++|+.+... ...+.+|...+.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~las-gs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILAC-GSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEE-ECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEE-EcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 99876 35666778899999999999855455776 7789999999887532 3445688999999999997
Q ss_pred -------------CcEEEEEeCCCCeEEEEEcCCC---cEEEEeecCCCCcceEEEEecCCC----CEEEEEcCCCcEEE
Q 018248 190 -------------GRFVATASSKGTLIRVFNTMDG---SLLQEMRRGAERAEIYSLAFSSNA----QWLAASSDKGTVHV 249 (359)
Q Consensus 190 -------------~~~l~~~~~dg~~i~iwd~~~~---~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~i~i 249 (359)
+++|++|+.|+. |++||++.. +.+..+.. |...|.+++|+|++ ++|++++.|++|+|
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~-v~lWd~~~~~~~~~~~~l~~--h~~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNL-IKLWKEEEDGQWKEEQKLEA--HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSB-CCEEEECTTSCEEEEECCBC--CSSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred cccccccccCccccceEEEecCCCe-EEEEEeCCCCccceeeeccc--CCCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 478999999999 999999765 35556665 77899999999987 89999999999999
Q ss_pred EEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCC
Q 018248 250 FGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDG 329 (359)
Q Consensus 250 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 329 (359)
|+++...... +.. ..+..+.+.|.+++|+|++++|++++.||
T Consensus 243 w~~~~~~~~~-----------------------------~~~---------~~~~~~~~~v~~v~~sp~g~~las~~~D~ 284 (316)
T 3bg1_A 243 WTCDDASSNT-----------------------------WSP---------KLLHKFNDVVWHVSWSITANILAVSGGDN 284 (316)
T ss_dssp EECSSTTCCC-----------------------------CBC---------CEEEECSSCEEEEEECTTTCCEEEEESSS
T ss_pred EEccCccccc-----------------------------hhh---------hhhhcCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 9998743110 000 01223457899999999999999999999
Q ss_pred eEEEEEeCC
Q 018248 330 SYYKCEFDP 338 (359)
Q Consensus 330 ~i~v~~~~~ 338 (359)
.|++|+...
T Consensus 285 ~v~lw~~~~ 293 (316)
T 3bg1_A 285 KVTLWKESV 293 (316)
T ss_dssp CEEEEEECT
T ss_pred eEEEEEECC
Confidence 999999875
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.5e-35 Score=256.55 Aligned_cols=271 Identities=18% Similarity=0.245 Sum_probs=219.1
Q ss_pred CCCCc-eEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 4 PDPIT-IHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 4 ~h~~~-v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
.|... +.++.+ ++++|++|+ |+.|++||+.+++.. ..+. +|.+.|..+++++++ .++.++ .|+.|++|
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~--~~~~-~h~~~V~~l~~~~~~-~l~s~s----~dg~i~vw 188 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFL--LQLS-GHDGGVWALKYAHGG-ILVSGS----TDRTVRVW 188 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEECSTT-EEEEEE----TTSCEEEE
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEE--EEEe-CCCcCEEEEEEcCCC-EEEEEe----CCCCEEEE
Confidence 46666 466665 567999999 999999999987654 4454 899999999998766 555555 68999999
Q ss_pred ECCCccEEeeec-cCcceeEEEEec--ceeEEE---ecCeEEEEEccccee-----------------------eeeEec
Q 018248 82 DDHENRYLGELS-FRSEVKNVRLRR--DRIVVV---LNQKVYVYNFTDLKL-----------------------VDQIET 132 (359)
Q Consensus 82 d~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~~---~d~~i~i~d~~~~~~-----------------------~~~~~~ 132 (359)
|+.+++.+..+. |...|.+++|++ ++.+++ .|+.|++||+.+++. +..+..
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 999999999998 999999999984 666666 899999999977653 333444
Q ss_pred cCCCceeeeeecCCCccEEEecCCCCeeEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCC
Q 018248 133 VVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDG 211 (359)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~ 211 (359)
|...+ .+++++++. +++ |+.|+.|++|+.. ++.+..+.+|...|.+++|+|++++|++|+.||. |++||++++
T Consensus 269 ~~~~v--~~~~~~~~~--l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~-i~vwd~~~~ 342 (464)
T 3v7d_B 269 HMASV--RTVSGHGNI--VVS-GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT-IRIWDLENG 342 (464)
T ss_dssp CSSCE--EEEEEETTE--EEE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEETTTT
T ss_pred ccceE--EEEcCCCCE--EEE-EeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc-EEEEECCCC
Confidence 54443 455666654 555 5679999998875 4677888899999999999999999999999999 999999999
Q ss_pred cEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecc
Q 018248 212 SLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLP 291 (359)
Q Consensus 212 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (359)
+.+..+.. |...|.+++|+ +++|++++.||.|++||+.+....
T Consensus 343 ~~~~~~~~--h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~--------------------------------- 385 (464)
T 3v7d_B 343 ELMYTLQG--HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK--------------------------------- 385 (464)
T ss_dssp EEEEEECC--CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE---------------------------------
T ss_pred cEEEEEeC--CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCcee---------------------------------
Confidence 99999987 77899999997 579999999999999999876511
Q ss_pred eEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 292 KYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
+. . .+...+..++|+|++++|++++ ||.|++|++..
T Consensus 386 --~~-------~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~ 421 (464)
T 3v7d_B 386 --FS-------Y-HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRS 421 (464)
T ss_dssp --EE-------E-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTT
T ss_pred --ee-------e-cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCC
Confidence 00 0 1234567789999999999988 99999999876
No 68
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.9e-35 Score=266.95 Aligned_cols=281 Identities=11% Similarity=0.161 Sum_probs=223.1
Q ss_pred CCCC---ceEEEEEccC-CCEEEEec-CCceEEEEcCCCcceeeeeccc---CCCCceeEEEEeccCCEEEEEecCCCCC
Q 018248 4 PDPI---TIHHLALNQD-HGCFATGT-ETGFRVYLSDPYKPIMRRDFDR---NPRGGTQLVSMLFRSNIICLVNSGPHQS 75 (359)
Q Consensus 4 ~h~~---~v~~~~~s~~-g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~~~~~d 75 (359)
.|.. .|.+++|+|+ +++|++++ |+.|++||+.+++.. ..+.. +|...+..++++ +++.++.++ .|
T Consensus 201 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~----~d 273 (615)
T 1pgu_A 201 THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL--KYIEDDQEPVQGGIFALSWL-DSQKFATVG----AD 273 (615)
T ss_dssp SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE--EECCBTTBCCCSCEEEEEES-SSSEEEEEE----TT
T ss_pred ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe--EEecccccccCCceEEEEEc-CCCEEEEEc----CC
Confidence 4666 8999999999 99999999 999999999887655 34422 589999999999 888888777 78
Q ss_pred CeEEEEECCCccEEeeecc-----CcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecC--
Q 018248 76 NKVMIWDDHENRYLGELSF-----RSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQN-- 145 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-- 145 (359)
+.|++||+.+++.+..+.. ...+.++.+. ++..++ .++.|++||+.+++.+..+..|...+..+++ |+
T Consensus 274 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~ 351 (615)
T 1pgu_A 274 ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLI 351 (615)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTE
T ss_pred CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcE
Confidence 9999999999999888873 3677888886 444444 8999999999888887777666655554444 22
Q ss_pred -------------------------------CCc----------------------------------------------
Q 018248 146 -------------------------------AGP---------------------------------------------- 148 (359)
Q Consensus 146 -------------------------------~~~---------------------------------------------- 148 (359)
+..
T Consensus 352 ~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (615)
T 1pgu_A 352 SGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLI 431 (615)
T ss_dssp EEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEE
T ss_pred EECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEE
Confidence 111
Q ss_pred -------------------------cEEEecCCC-CeeEEEEecCCeee--EEeecccccccEEEEccCCcEEEEEeCCC
Q 018248 149 -------------------------MVMACPGLL-KGQVRVEDYGTKKS--KYITAHASRIASIAMTLDGRFVATASSKG 200 (359)
Q Consensus 149 -------------------------~~l~~~g~~-d~~v~~~~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 200 (359)
.++++ ++. |+.|++|+...... ..+..|...|.+++|+|++++|++++.|+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 510 (615)
T 1pgu_A 432 LQSFTGDIIKSVRLNSPGSAVSLSQNYVAV-GLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMG 510 (615)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECSSEEEE-EETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EeccCCceeeecccCCCceEEEEcCCEEEE-eecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCC
Confidence 11222 233 66666666665444 55677899999999999999999999999
Q ss_pred CeEEEEEcCCCcEEEEeecCCCCcceEEEEecC----------CCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCC
Q 018248 201 TLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSS----------NAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEP 270 (359)
Q Consensus 201 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~----------~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 270 (359)
. |++||+.+++.+..+... |...|++++|+| ++++|++++.||.|++||++++...
T Consensus 511 ~-i~iw~~~~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~------------ 576 (615)
T 1pgu_A 511 K-ILLYDLQSREVKTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKI------------ 576 (615)
T ss_dssp C-EEEEETTTTEEEECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCC------------
T ss_pred e-EEEeeCCCCcceeEeecC-CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCcee------------
Confidence 9 999999999998877642 678999999999 9999999999999999999886311
Q ss_pred CccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 271 NLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
...+..|.+.|.+++|+|+++ |++++.||.|++|+++.
T Consensus 577 -----------------------------~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 577 -----------------------------IKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp -----------------------------EEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred -----------------------------chhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 111334567899999999999 99999999999999975
No 69
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.3e-36 Score=255.92 Aligned_cols=244 Identities=12% Similarity=0.199 Sum_probs=201.9
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCc-----ceeeeecccCCCCceeEEEEeccCC-EEEEEecCCCCCC
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYK-----PIMRRDFDRNPRGGTQLVSMLFRSN-IICLVNSGPHQSN 76 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~~~~~~~~d~ 76 (359)
.|...|.+++|+|+|++|++|+ |+.+++|++.... ......+. +|.+.+..+.+.++.. .++.++ .|+
T Consensus 106 ~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-gh~~~v~~~~~~~~~~~~l~s~s----~D~ 180 (380)
T 3iz6_a 106 LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLT-GHKGYASSCQYVPDQETRLITGS----GDQ 180 (380)
T ss_dssp CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCC-CCSSCCCCCBCCSSSSSCEEEEC----TTS
T ss_pred cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeecc-CCCcceEEEEEecCCCCEEEEEC----CCC
Confidence 4778899999999999999999 9999999987432 12223344 8999999998888754 455555 689
Q ss_pred eEEEEECCCccEEeee-----c-cCcceeEEEEec-ceeEEE---ecCeEEEEEcc-cceeeeeEeccCCCceeeeeecC
Q 018248 77 KVMIWDDHENRYLGEL-----S-FRSEVKNVRLRR-DRIVVV---LNQKVYVYNFT-DLKLVDQIETVVNPTGLCDVSQN 145 (359)
Q Consensus 77 ~i~iwd~~~~~~~~~~-----~-~~~~v~~~~~~~-~~~~~~---~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~ 145 (359)
+|++||+.+++.+..+ . |...|.++.|++ ++.+++ .|+.|++||++ ..+.+..+.+|...+..++|+|+
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~ 260 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD 260 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecC
Confidence 9999999999988776 3 778899999987 666666 89999999997 45778888899999999999998
Q ss_pred CCccEEEecCCCCeeEEEEecCC-eeeEEeeccc-------ccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEe
Q 018248 146 AGPMVMACPGLLKGQVRVEDYGT-KKSKYITAHA-------SRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEM 217 (359)
Q Consensus 146 ~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~-------~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~ 217 (359)
+.. +++ |+.|+.|++|+... ..+..+..+. ..|.+++|+|+|++|++|+.||. |++||+.+++.+..+
T Consensus 261 ~~~--l~s-~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 261 GQR--FGT-GSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-CYVWDTLLAEMVLNL 336 (380)
T ss_dssp SSE--EEE-ECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-EEEEETTTCCEEEEE
T ss_pred CCe--EEE-EcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-EEEEECCCCceEEEE
Confidence 865 665 77899999998875 4555554332 34899999999999999999999 999999999988777
Q ss_pred ec--CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 218 RR--GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 218 ~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
.. ..|.+.|.+++|+|+|++|++|+.|++|+||++...+
T Consensus 337 ~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 337 GTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 32 2377899999999999999999999999999998754
No 70
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.9e-35 Score=248.65 Aligned_cols=243 Identities=15% Similarity=0.223 Sum_probs=200.1
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcc--eeeeecccCCCCceeEEEEec--cCCEEEEEecCCCCCCe
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKP--IMRRDFDRNPRGGTQLVSMLF--RSNIICLVNSGPHQSNK 77 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~--~~~~~~~~~h~~~v~~~~~~~--~~~~~~~~~~~~~~d~~ 77 (359)
..|.+.|++++|+|++++|++|+ |+.|++|++.+... .....+. +|...|..++|++ +++.++.++ .|+.
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~----~dg~ 82 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASAS----YDKT 82 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEE----TTSC
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEc----CCCe
Confidence 46999999999999999999999 99999999986543 2334444 8999999999998 477777777 7899
Q ss_pred EEEEECCCc---------cEEeeec-cCcceeEEEEecc--eeEEE---ecCeEEEEEcccceeeeeEe-----------
Q 018248 78 VMIWDDHEN---------RYLGELS-FRSEVKNVRLRRD--RIVVV---LNQKVYVYNFTDLKLVDQIE----------- 131 (359)
Q Consensus 78 i~iwd~~~~---------~~~~~~~-~~~~v~~~~~~~~--~~~~~---~d~~i~i~d~~~~~~~~~~~----------- 131 (359)
|++||+.++ +.+..+. |...|.+++|+|+ +.+++ .|+.|++||+++++.+..+.
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 999999886 4566666 8899999999998 87776 79999999998776554433
Q ss_pred --ccCCCceeeeeecC---CCccEEEecCCCCeeEEEEecCCee---eEEeecccccccEEEEccCC----cEEEEEeCC
Q 018248 132 --TVVNPTGLCDVSQN---AGPMVMACPGLLKGQVRVEDYGTKK---SKYITAHASRIASIAMTLDG----RFVATASSK 199 (359)
Q Consensus 132 --~~~~~~~~~~~~~~---~~~~~l~~~g~~d~~v~~~~~~~~~---~~~~~~~~~~i~~~~~s~~~----~~l~~~~~d 199 (359)
.+...+.+++|+|+ +. .+++ ++.++.+.+|...... +..+.+|...|.+++|+|++ ++|++++.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~--~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPE--KLAV-SALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCC--EEEE-EETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred cCCcccceeEEEeccCCCCCc--EEEE-ecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 45667788899887 44 3554 5568888776655433 56678899999999999998 899999999
Q ss_pred CCeEEEEEcCCC----------------------------------------------cEEEEeecCCCCcceEEEEecC
Q 018248 200 GTLIRVFNTMDG----------------------------------------------SLLQEMRRGAERAEIYSLAFSS 233 (359)
Q Consensus 200 g~~i~iwd~~~~----------------------------------------------~~~~~~~~~~~~~~i~~~~~s~ 233 (359)
|. |++||++++ +.+..+.. |...|++++|+|
T Consensus 240 g~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~s~ 316 (351)
T 3f3f_A 240 GR-IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD--HNGEVWSVSWNL 316 (351)
T ss_dssp SC-EEEEEEEECC---------------------------------------CCSEEEEEEEEECT--TSSCEEEEEECS
T ss_pred Ce-EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec--ccccEEEEEEcC
Confidence 99 999999875 45555655 778999999999
Q ss_pred CCCEEEEEcCCCcEEEEEccCCC
Q 018248 234 NAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 234 ~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
++++|++++.||.|+||++.+++
T Consensus 317 ~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 317 TGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp SSCCEEEEETTSCEEEEEECTTS
T ss_pred CCCEEEEecCCCcEEEEecCcCc
Confidence 99999999999999999999876
No 71
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.3e-34 Score=240.47 Aligned_cols=248 Identities=15% Similarity=0.242 Sum_probs=206.9
Q ss_pred eeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEE
Q 018248 42 RRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVY 117 (359)
Q Consensus 42 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~ 117 (359)
...+. +|...|..++++++++.++.++ .|+.|++|++.+++....+. |...|.+++|+|++.+++ .|+.|+
T Consensus 16 ~~~~~-gh~~~v~~~~~s~~~~~l~s~~----~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 16 KFTLA-GHTKAVSSVKFSPNGEWLASSS----ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp EEEEC-CCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEEc-ccCCcEEEEEECCCCCEEEEee----CCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 34555 8999999999999999888877 78999999999999988887 899999999999998887 799999
Q ss_pred EEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEE
Q 018248 118 VYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATA 196 (359)
Q Consensus 118 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 196 (359)
+||+++++.+..+..|...+..++|+|+++. +++ |+.|+.|++|+... +.+..+..|..+|.+++|+|++++|+++
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~s-~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNL--IVS-GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSE--EEE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCE--EEE-EeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 9999999999999999999999999998764 555 66799999998764 6677888999999999999999999999
Q ss_pred eCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCC
Q 018248 197 SSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKN 276 (359)
Q Consensus 197 ~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (359)
+.|+. |++||+++++.+..+... +...+..++|+|++++|++++.|+.|++||+.+++..
T Consensus 168 ~~d~~-i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~------------------ 227 (312)
T 4ery_A 168 SYDGL-CRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL------------------ 227 (312)
T ss_dssp ETTSC-EEEEETTTCCEEEEECCS-SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE------------------
T ss_pred eCCCc-EEEEECCCCceeeEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE------------------
Confidence 99999 999999999988877643 5578999999999999999999999999999876511
Q ss_pred CCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 277 SSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
..+.... .....+......+++.+|++|+.||.|++|++..
T Consensus 228 ---------------~~~~~~~------~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 228 ---------------KTYTGHK------NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp ---------------EEECSSC------CSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred ---------------EEEEecC------CceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 0111110 0001122222346788999999999999999875
No 72
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.9e-35 Score=254.52 Aligned_cols=278 Identities=14% Similarity=0.227 Sum_probs=220.2
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++| ++++|++|+ |+.|++||+.+++.. ..+. +|...|.++++ +++.++.++ .||.|++||
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~--~~~~-~h~~~v~~l~~--~~~~l~sg~----~dg~i~vwd 199 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECK--RILT-GHTGSVLCLQY--DERVIITGS----SDSTVRVWD 199 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEE--EEEC-CCSSCEEEEEC--CSSEEEEEE----TTSCEEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEE--EEEc-CCCCcEEEEEE--CCCEEEEEc----CCCeEEEEE
Confidence 46677998887 789999999 999999999887655 4444 78998887776 777777777 789999999
Q ss_pred CCCccEEeeec-cCcceeEEEEecceeEEE-ecCeEEEEEcccceee---eeEeccCCCceeeeeecCCCccEEEecCCC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLV---DQIETVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
+.+++.+..+. |...|.+++|+++....+ .|+.|++||+.+++.. ..+..|...+..+++ +++. +++ |+.
T Consensus 200 ~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~--l~s-~~~ 274 (435)
T 1p22_A 200 VNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKY--IVS-ASG 274 (435)
T ss_dssp SSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTE--EEE-EET
T ss_pred CCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCE--EEE-EeC
Confidence 99999999988 889999999986533333 8999999999877655 556677777777766 4443 555 567
Q ss_pred CeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCC
Q 018248 158 KGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ 236 (359)
Q Consensus 158 d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 236 (359)
||.|++|+... +.+..+.+|...|.++++ +++++++|+.||. |++||+++++.+..+.. |...|.+++| +++
T Consensus 275 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~~~~--~~~ 347 (435)
T 1p22_A 275 DRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT-IRLWDIECGACLRVLEG--HEELVRCIRF--DNK 347 (435)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECC--CSSCEEEEEC--CSS
T ss_pred CCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-EEEEECCCCCEEEEEeC--CcCcEEEEEe--cCC
Confidence 99999988764 677788899999999998 4689999999999 99999999999999987 7789999999 788
Q ss_pred EEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeec
Q 018248 237 WLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFG 316 (359)
Q Consensus 237 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 316 (359)
+|++++.||.|++||+.++..... . ........+..+.+.|.+++|
T Consensus 348 ~l~sg~~dg~i~vwd~~~~~~~~~------------------~---------------~~~~~~~~~~~h~~~v~~l~~- 393 (435)
T 1p22_A 348 RIVSGAYDGKIKVWDLVAALDPRA------------------P---------------AGTLCLRTLVEHSGRVFRLQF- 393 (435)
T ss_dssp EEEEEETTSCEEEEEHHHHTSTTS------------------C---------------TTTTEEEEECCCSSCCCCEEE-
T ss_pred EEEEEeCCCcEEEEECCCCCCccc------------------c---------------ccchheeeccCCCCCeEEEEe-
Confidence 999999999999999987652210 0 000011224446678888888
Q ss_pred ccCCEEEEEecCCeEEEEEeCCC
Q 018248 317 RQNNTIVIVGLDGSYYKCEFDPM 339 (359)
Q Consensus 317 ~~~~~l~~~~~dg~i~v~~~~~~ 339 (359)
++++|++++.||.|++|++...
T Consensus 394 -~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 394 -DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp -CSSCEEECCSSSEEEEEC----
T ss_pred -CCCEEEEEeCCCEEEEEECCCC
Confidence 7789999999999999998763
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1e-34 Score=264.89 Aligned_cols=280 Identities=17% Similarity=0.207 Sum_probs=233.8
Q ss_pred CCCCCceEEEEEccCCCEEEEecCCceEEEEcCCC----cceeeeecccCCCCc-eeEEEEec--cCCEEEEEecCCCCC
Q 018248 3 QPDPITIHHLALNQDHGCFATGTETGFRVYLSDPY----KPIMRRDFDRNPRGG-TQLVSMLF--RSNIICLVNSGPHQS 75 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~----~~~~~~~~~~~h~~~-v~~~~~~~--~~~~~~~~~~~~~~d 75 (359)
..|...|.+++|+|+|++|++++++.|++|+++++ +.. ..+. +|... |.++++++ +++.++.++ .|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~--~~~~-~h~~~~v~~~~~sp~~~~~~l~s~~----~d 87 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPV--VQFT-GHGSSVVTTVKFSPIKGSQYLCSGD----ES 87 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSE--EEEC-TTTTSCEEEEEECSSTTCCEEEEEE----TT
T ss_pred CCccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccc--eEEe-cCCCceEEEEEECcCCCCCEEEEec----CC
Confidence 46889999999999999999999999999999976 444 4444 89999 99999999 889888877 78
Q ss_pred CeEEEEECCCc--------cEEeeec-cCcceeEEEEecceeEEE---ec----CeEEEEEcccceeeeeEeccCCCcee
Q 018248 76 NKVMIWDDHEN--------RYLGELS-FRSEVKNVRLRRDRIVVV---LN----QKVYVYNFTDLKLVDQIETVVNPTGL 139 (359)
Q Consensus 76 ~~i~iwd~~~~--------~~~~~~~-~~~~v~~~~~~~~~~~~~---~d----~~i~i~d~~~~~~~~~~~~~~~~~~~ 139 (359)
+.|++||+.++ +.+..+. |...|.+++|+|++.+++ .+ +.|++|| .++.+..+..|...+..
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINA 165 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEE
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEE
Confidence 99999999754 6666666 889999999999998887 33 5788888 67788888899999999
Q ss_pred eeeecCCCccEEEecCCCCeeEEEEecCC-eeeEEeecccc---cccEEEEccC-CcEEEEEeCCCCeEEEEEcCCCcEE
Q 018248 140 CDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITAHAS---RIASIAMTLD-GRFVATASSKGTLIRVFNTMDGSLL 214 (359)
Q Consensus 140 ~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~~---~i~~~~~s~~-~~~l~~~~~dg~~i~iwd~~~~~~~ 214 (359)
++|+|+++.. +++ ++.|+.|++|+... +.+..+..|.. .|.+++|+|+ +++|++++.|+. |++||+++++.+
T Consensus 166 ~~~~~~~~~~-l~~-~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~ 242 (615)
T 1pgu_A 166 CHLKQSRPMR-SMT-VGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK-ISCFDGKSGEFL 242 (615)
T ss_dssp EEECSSSSCE-EEE-EETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC-EEEEETTTCCEE
T ss_pred EEECCCCCcE-EEE-EeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe-EEEEECCCCCEe
Confidence 9999998743 444 55799999998765 66777888998 9999999999 999999999999 999999999999
Q ss_pred EEeecC--CCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecce
Q 018248 215 QEMRRG--AERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPK 292 (359)
Q Consensus 215 ~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (359)
..+... .|...|.+++|+ ++++|++++.|+.|++||+++++.. .
T Consensus 243 ~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~---------------------------------~ 288 (615)
T 1pgu_A 243 KYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV---------------------------------Q 288 (615)
T ss_dssp EECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE---------------------------------E
T ss_pred EEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE---------------------------------E
Confidence 988320 277899999999 9999999999999999999876511 0
Q ss_pred EEecccceeEEeec----CCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 293 YFSSKWSMAQFRLP----ENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 293 ~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
. +..+ ...+..+.|+ +++.|++++.||.|++|++..
T Consensus 289 ~---------~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 289 K---------WTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp E---------EECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTE
T ss_pred E---------EcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCC
Confidence 0 1111 2456677775 889999999999999998764
No 74
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-35 Score=250.33 Aligned_cols=247 Identities=13% Similarity=0.180 Sum_probs=203.6
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEecc--CCEEEEEecCCCCCCeEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFR--SNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~~~~d~~i~ 79 (359)
..|...|.+++|+|++++|++|+ |+.|+||+++.........+. +|...|..++|+++ ++.++.++ .|+.|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~----~dg~v~ 82 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCS----YDGKVL 82 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEE----TTSCEE
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec-CCCCcEEEEEeCCCCCCCEEEEec----cCCEEE
Confidence 35899999999999999999998 999999999855555555665 89999999999877 67777777 789999
Q ss_pred EEECCCcc--EEeeec-cCcceeEEEEecc--eeEEE---ecCeEEEEEcccce--eeeeEeccCCCceeeeeecCC---
Q 018248 80 IWDDHENR--YLGELS-FRSEVKNVRLRRD--RIVVV---LNQKVYVYNFTDLK--LVDQIETVVNPTGLCDVSQNA--- 146 (359)
Q Consensus 80 iwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~---~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~--- 146 (359)
+||+.+++ .+..+. |...|.+++|+|+ +.+++ .|+.|++||+.++. ....+..+...+..++|+|..
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99999886 566666 8899999999999 77666 89999999997763 344566788889999999941
Q ss_pred --------CccEEEecCCCCeeEEEEecCC-----eeeEEeecccccccEEEEccC---CcEEEEEeCCCCeEEEEEcCC
Q 018248 147 --------GPMVMACPGLLKGQVRVEDYGT-----KKSKYITAHASRIASIAMTLD---GRFVATASSKGTLIRVFNTMD 210 (359)
Q Consensus 147 --------~~~~l~~~g~~d~~v~~~~~~~-----~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~~i~iwd~~~ 210 (359)
+..++++ ++.|+.|++|+... .....+.+|...|.+++|+|+ +++|++++.||. |++||+++
T Consensus 163 ~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~-i~iwd~~~ 240 (379)
T 3jrp_A 163 DGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWTQDN 240 (379)
T ss_dssp -------CTTCEEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEEEESS
T ss_pred cccccCCCCCCEEEE-EeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE-EEEEeCCC
Confidence 1233555 56799999988754 244567889999999999999 899999999999 99999988
Q ss_pred Cc---EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 211 GS---LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 211 ~~---~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
++ ....+....+...|.+++|+|++++|++++.||.|++|++....
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 74 33334333467899999999999999999999999999998643
No 75
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.2e-36 Score=293.32 Aligned_cols=278 Identities=15% Similarity=0.225 Sum_probs=239.9
Q ss_pred CCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC
Q 018248 5 DPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD 83 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 83 (359)
+...|.+++|+|+++++++|+ +|.|++|++.+++.. ..+. +|...+..++|+++++.++.++ .|+.|++||+
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~--~~~~-~h~~~v~~l~~s~dg~~l~s~~----~dg~i~vwd~ 1032 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVF--SSGV-GHKKAVRHIQFTADGKTLISSS----EDSVIQVWNW 1032 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCE--EECC-CCSSCCCCEEECSSSSCEEEEC----SSSBEEEEET
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCcee--eecc-cCCCceEEEEECCCCCEEEEEc----CCCEEEEEEC
Confidence 356799999999999999999 999999999987654 3343 7999999999999999888877 7899999999
Q ss_pred CCccEEeeeccCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeE
Q 018248 84 HENRYLGELSFRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQV 161 (359)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v 161 (359)
.+++......|...|.++.|+|++.+++ .|+.|++||+.+++....+..|...+..++++|++.. +++ ++.|+.|
T Consensus 1033 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~--l~s-~s~d~~v 1109 (1249)
T 3sfz_A 1033 QTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATK--FSS-TSADKTA 1109 (1249)
T ss_dssp TTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSS--CEE-ECCSSCC
T ss_pred CCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCE--EEE-EcCCCcE
Confidence 9998887667999999999999998877 8999999999999999999999999999999999886 554 5579999
Q ss_pred EEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEee-------cCCCCcceEEEEecC
Q 018248 162 RVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMR-------RGAERAEIYSLAFSS 233 (359)
Q Consensus 162 ~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~-------~~~~~~~i~~~~~s~ 233 (359)
++|+... ..+..+.+|...|++++|+|+|++|++++.||. |++||+.+++.+..+. ...|.+.|++++|+|
T Consensus 1110 ~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~ 1188 (1249)
T 3sfz_A 1110 KIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGE-IRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSP 1188 (1249)
T ss_dssp CEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSC-CCEEESSSSCCCCCCCCCC-------CCSCCCEEEECT
T ss_pred EEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCE-EEEEECCCCceEEEeccccccccccccCceEEEEEECC
Confidence 9998764 667778899999999999999999999999999 9999999988766541 012678899999999
Q ss_pred CCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEe
Q 018248 234 NAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLV 313 (359)
Q Consensus 234 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 313 (359)
||++|++++ |.|++||+.+++... .+..+.+.+..+
T Consensus 1189 dg~~l~s~~--g~v~vwd~~~g~~~~------------------------------------------~~~~~~~~i~~~ 1224 (1249)
T 3sfz_A 1189 DSKTLVSAG--GYLKWWNVATGDSSQ------------------------------------------TFYTNGTNLKKI 1224 (1249)
T ss_dssp TSSCEEEES--SSEEEBCSSSCBCCC------------------------------------------CCCCSSCCCCCC
T ss_pred CCCEEEECC--CeEEEEECCCCceee------------------------------------------eeeccCCcccEE
Confidence 999999886 899999999876331 122234567889
Q ss_pred eecccCCEEEEEecCCeEEEEEeC
Q 018248 314 GFGRQNNTIVIVGLDGSYYKCEFD 337 (359)
Q Consensus 314 ~~s~~~~~l~~~~~dg~i~v~~~~ 337 (359)
+|+||+++|++++.||.+++|++.
T Consensus 1225 ~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1225 HVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp EECSSSCCEEEECTTCCEEEECCC
T ss_pred EECCCCCEEEEecCCcEEEEEeec
Confidence 999999999999999999999874
No 76
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-34 Score=245.60 Aligned_cols=238 Identities=15% Similarity=0.176 Sum_probs=193.6
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++|+|++.++++|+ |+.|++||+.+++.. ..+. +|...|..++|+++++.++.++ .|+.|++||
T Consensus 74 ~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~--~~~~-~h~~~v~~v~~sp~~~~l~s~~----~d~~i~~wd 146 (343)
T 2xzm_R 74 GHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY--KRFV-GHQSEVYSVAFSPDNRQILSAG----AEREIKLWN 146 (343)
T ss_dssp CCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE--EEEE-CCCSCEEEEEECSSTTEEEEEE----TTSCEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE--EEEc-CCCCcEEEEEECCCCCEEEEEc----CCCEEEEEe
Confidence 5889999999999999999999 999999999987654 3444 8999999999999999888877 789999999
Q ss_pred CCCccEEeee---ccCcceeEEEEecce----------eEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCC
Q 018248 83 DHENRYLGEL---SFRSEVKNVRLRRDR----------IVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNA 146 (359)
Q Consensus 83 ~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (359)
+......... .|...|.+++|+|++ .+++ .|+.|++||. ..+....+..|...+..++|+|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g 225 (343)
T 2xzm_R 147 ILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNG 225 (343)
T ss_dssp SSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTS
T ss_pred ccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCC
Confidence 8754333333 377889999999986 4555 7999999994 667777888899999999999988
Q ss_pred CccEEEecCCCCeeEEEEecC-Ce-eeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEE--EeecC--
Q 018248 147 GPMVMACPGLLKGQVRVEDYG-TK-KSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQ--EMRRG-- 220 (359)
Q Consensus 147 ~~~~l~~~g~~d~~v~~~~~~-~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~--~~~~~-- 220 (359)
+. |++ |+.|+.|++|+.. .. ....+ .+...|.+++|+|++++++++ .|+. |++||+.+++... .+...
T Consensus 226 ~~--l~s-gs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~-v~iw~~~~~~~~~~~~~~~~~~ 299 (343)
T 2xzm_R 226 KY--IAT-GGKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQG-VKIFNLMTQSKAPVCTIEAEPI 299 (343)
T ss_dssp SE--EEE-EETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSC-EEEEESSSCCSCSEEECCCCSG
T ss_pred CE--EEE-EcCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEE-CCCC-EEEEEeCCCCCCceEEeecCcc
Confidence 75 665 6689999999973 32 23333 355679999999999988755 5777 9999998776443 33311
Q ss_pred -------CCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 018248 221 -------AERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 221 -------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 255 (359)
.|...|.+++|+|+|++|++|+.||.|++|+++++
T Consensus 300 ~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 300 TKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp GGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred hhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 25678999999999999999999999999999865
No 77
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.9e-35 Score=251.95 Aligned_cols=244 Identities=18% Similarity=0.207 Sum_probs=191.8
Q ss_pred CCCCceEEEEEccCCCEEEEe-----------c-CCceEEEEcCCCcceeee--e--cc--cCCCCceeEEEEeccCCEE
Q 018248 4 PDPITIHHLALNQDHGCFATG-----------T-ETGFRVYLSDPYKPIMRR--D--FD--RNPRGGTQLVSMLFRSNII 65 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~-----------~-d~~i~iw~~~~~~~~~~~--~--~~--~~h~~~v~~~~~~~~~~~~ 65 (359)
.|...|.+++++ ++.+++| + |+.+++|++++....... . +. ..+...+.+++|+|+++.+
T Consensus 71 ~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~l 148 (365)
T 4h5i_A 71 DNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVA 148 (365)
T ss_dssp TTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCE
T ss_pred CCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEE
Confidence 466677777664 5566654 3 677999998765432211 1 11 1344568899999999999
Q ss_pred EEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeE--eccCCCceeee
Q 018248 66 CLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQI--ETVVNPTGLCD 141 (359)
Q Consensus 66 ~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~ 141 (359)
++++++ .|++|++||+.+++.+..+.|...|.+++|+|++++++ .++.+.+|+..+++.+... ..+...+..++
T Consensus 149 a~as~~--~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 149 AIASSK--VPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp EEEESC--SSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred EEEECC--CCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 888776 58999999999999999999999999999999999988 7788889988777665433 44666788899
Q ss_pred eecCCCccEEEecCCCCe----eEEEEecCCe-----eeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc
Q 018248 142 VSQNAGPMVMACPGLLKG----QVRVEDYGTK-----KSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGS 212 (359)
Q Consensus 142 ~~~~~~~~~l~~~g~~d~----~v~~~~~~~~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~ 212 (359)
|+|++..++.++ .++ .+++|+.... ....+.+|...|++++|+|||++||+|+.|+. |+|||+++++
T Consensus 227 fspdg~~l~~~s---~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~-V~iwd~~~~~ 302 (365)
T 4h5i_A 227 FIADDTVLIAAS---LKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS-IALVKLKDLS 302 (365)
T ss_dssp EEETTEEEEEEE---ESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC-EEEEETTTTE
T ss_pred EcCCCCEEEEEe---cCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE-EEEEECCCCc
Confidence 999987633332 333 4555665432 23456789999999999999999999999999 9999999999
Q ss_pred EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 213 LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 213 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
++..+..+ |...|++++|||||++|++++.|++|+||++....
T Consensus 303 ~~~~~~~g-H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 303 MSKIFKQA-HSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp EEEEETTS-SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred EEEEecCc-ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 99887433 78899999999999999999999999999997543
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-34 Score=248.49 Aligned_cols=244 Identities=11% Similarity=0.152 Sum_probs=203.3
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++|+|++++|++|+ |+.|++|++++++.. ..+. +|...+..+++ +++.++.++ .|+.|++||
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~-~~~~~v~~~~~--~~~~l~~~~----~dg~i~i~d 202 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKL--RTMA-GHQARVGCLSW--NRHVLSSGS----RSGAIHHHD 202 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEEC-CCSSCEEEEEE--ETTEEEEEE----TTSEEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEE--EEec-CCCCceEEEEE--CCCEEEEEc----CCCCEEEEe
Confidence 4788999999999999999999 999999999987655 4444 78999988877 567777766 789999999
Q ss_pred CC-CccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCC
Q 018248 83 DH-ENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 83 ~~-~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
+. .+..+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..+...+..++|+|++..+++..+|+.
T Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 203 VRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTT
T ss_pred cccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCC
Confidence 98 456666776 899999999999998887 7899999999999999899889999999999998887544433457
Q ss_pred CeeEEEEecCCe-eeEEeecccccccEEEEccCCcEEEEE--eCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCC
Q 018248 158 KGQVRVEDYGTK-KSKYITAHASRIASIAMTLDGRFVATA--SSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSN 234 (359)
Q Consensus 158 d~~v~~~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~--~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 234 (359)
|+.|++|+.... .+..+ .+...+.+++|+|++++++++ +.||. |++||+.+++.........|...|.+++|+|+
T Consensus 283 d~~i~i~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~-i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d 360 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTV-DAGSQVTSLIWSPHSKEIMSTHGFPDNN-LSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD 360 (401)
T ss_dssp TCEEEEEETTTCCEEEEE-ECSSCEEEEEECSSSSEEEEEECTTTCE-EEEEEEETTEEEEEEEEECCSSCCCEEEECTT
T ss_pred CCEEEEEECCCCCEEEEE-eCCCcEEEEEECCCCCeEEEEeecCCCc-EEEEecCCccceeEEEecCCCCCEEEEEECCC
Confidence 999999997654 44444 477889999999999999995 48999 99999999776655433337789999999999
Q ss_pred CCEEEEEcCCCcEEEEEccCCCCC
Q 018248 235 AQWLAASSDKGTVHVFGLKVDSGS 258 (359)
Q Consensus 235 ~~~l~~~~~dg~i~iw~~~~~~~~ 258 (359)
+++|++++.||.|++|++.+++..
T Consensus 361 g~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC----
T ss_pred CCEEEEEeCCCcEEEEECCCCccc
Confidence 999999999999999999987743
No 79
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-35 Score=276.03 Aligned_cols=293 Identities=10% Similarity=0.102 Sum_probs=206.8
Q ss_pred CCCCceEEEEEccC-CCEEEEec-CCceEEEEcCCCcceeeeecc---------------cCCCCceeEEEEeccCCEEE
Q 018248 4 PDPITIHHLALNQD-HGCFATGT-ETGFRVYLSDPYKPIMRRDFD---------------RNPRGGTQLVSMLFRSNIIC 66 (359)
Q Consensus 4 ~h~~~v~~~~~s~~-g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~---------------~~h~~~v~~~~~~~~~~~~~ 66 (359)
.|..+|.+++|+|+ +..|++|+ |+.| +||+.+++........ .+|...|..++|++++..++
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 57889999999996 47888888 9999 9999976544222210 12357799999999999888
Q ss_pred EEecCCCCCCeEEEEECCCccEEee--ec-----------------cCcceeEEEEe----cce-eEEE---ec-----C
Q 018248 67 LVNSGPHQSNKVMIWDDHENRYLGE--LS-----------------FRSEVKNVRLR----RDR-IVVV---LN-----Q 114 (359)
Q Consensus 67 ~~~~~~~~d~~i~iwd~~~~~~~~~--~~-----------------~~~~v~~~~~~----~~~-~~~~---~d-----~ 114 (359)
.++ .|+.|++||+.+++++.. +. +...|.+++|+ |++ .+++ .+ .
T Consensus 228 sgs----~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~ 303 (902)
T 2oaj_A 228 TIH----EDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQ 303 (902)
T ss_dssp EEE----TTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCC
T ss_pred EEE----CCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCc
Confidence 887 799999999999887653 21 23468899995 443 3333 11 2
Q ss_pred eEEEEEc-----------------------------------------------------------------------cc
Q 018248 115 KVYVYNF-----------------------------------------------------------------------TD 123 (359)
Q Consensus 115 ~i~i~d~-----------------------------------------------------------------------~~ 123 (359)
.+.+|++ .+
T Consensus 304 ~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~ 383 (902)
T 2oaj_A 304 SLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPS 383 (902)
T ss_dssp CEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTT
T ss_pred eEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCC
Confidence 5555552 22
Q ss_pred ceeeee-------EeccCCCce----------------------------------eeeeecCCCccEEEecCCCCeeEE
Q 018248 124 LKLVDQ-------IETVVNPTG----------------------------------LCDVSQNAGPMVMACPGLLKGQVR 162 (359)
Q Consensus 124 ~~~~~~-------~~~~~~~~~----------------------------------~~~~~~~~~~~~l~~~g~~d~~v~ 162 (359)
+..... +..+...+. .++++|++ .++++ |+.|++|+
T Consensus 384 g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg--~~laS-gs~DgtVr 460 (902)
T 2oaj_A 384 GIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYG--TAFIT-GHSNGSVR 460 (902)
T ss_dssp CCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEE--EEEEE-EETTSEEE
T ss_pred CCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccC--cEEEE-ecCCCcEE
Confidence 211100 000111111 22334443 34666 77899999
Q ss_pred EEecCCeeeE-----E--ee-----cccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc------------------
Q 018248 163 VEDYGTKKSK-----Y--IT-----AHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGS------------------ 212 (359)
Q Consensus 163 ~~~~~~~~~~-----~--~~-----~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~------------------ 212 (359)
+|+.....+. . +. +|...|.+++|+||+++||+|+.||+ |+|||+.+++
T Consensus 461 lWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dgt-V~lwd~~~~~~~~~~~~~~~~~~~~~~~ 539 (902)
T 2oaj_A 461 IYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGD-VVLFKYEVNQFYSVENRPESGDLEMNFR 539 (902)
T ss_dssp EEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSC-EEEEEEEECCC---------------CC
T ss_pred EEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcE-EEEEEecCccccCccccCCCcccceeee
Confidence 9998754321 1 11 78889999999999999999999999 9999997662
Q ss_pred ---------------------------EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccc
Q 018248 213 ---------------------------LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLH 265 (359)
Q Consensus 213 ---------------------------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 265 (359)
++..+.. |.+.|++++||||| +||+|+.|++|+|||++++...
T Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~--h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~------- 609 (902)
T 2oaj_A 540 RFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA--NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAII------- 609 (902)
T ss_dssp SCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC--CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEE-------
T ss_pred eccccCCccccccccccCCCCCCCccceeEEEEc--CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEE-------
Confidence 3555655 77899999999999 9999999999999998765410
Q ss_pred cCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEe-ecCCcEEEeeec-----ccC---CEEEEEecCCeEEEEEe
Q 018248 266 SASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFR-LPENVQYLVGFG-----RQN---NTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s-----~~~---~~l~~~~~dg~i~v~~~ 336 (359)
.... ...+. .|.+.|++++|+ ||| +.|++|+.||+|++|++
T Consensus 610 ----------------------------~~~~--~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 610 ----------------------------YMEN--IREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp ----------------------------EEEE--GGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred ----------------------------EEee--hhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 0000 00122 466789999999 885 89999999999999999
Q ss_pred CCCCCCceE
Q 018248 337 DPMKGGEMH 345 (359)
Q Consensus 337 ~~~~~~~~~ 345 (359)
.+...|++.
T Consensus 660 ~p~~~g~~~ 668 (902)
T 2oaj_A 660 LPASGGKFD 668 (902)
T ss_dssp EECGGGCEE
T ss_pred ecCCCCcEE
Confidence 776555554
No 80
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=7e-34 Score=249.32 Aligned_cols=305 Identities=16% Similarity=0.197 Sum_probs=231.0
Q ss_pred CCCCce-EEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 4 PDPITI-HHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 4 ~h~~~v-~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
.|.+.| .+ ++++|++|++|+ |+.|++||+.+++.. ..+. +|...|..+++. ++.++.++ .|+.|++|
T Consensus 116 ~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~~--~~~l~s~~----~dg~i~vw 184 (445)
T 2ovr_B 116 GHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCL--RTLV-GHTGGVWSSQMR--DNIIISGS----TDRTLKVW 184 (445)
T ss_dssp CSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEE--EECC-CCSSCEEEEEEE--TTEEEEEE----TTSCEEEE
T ss_pred ccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEE--EEEc-CCCCCEEEEEec--CCEEEEEe----CCCeEEEE
Confidence 466654 54 555789999999 999999999987655 4555 899999888775 66777666 78999999
Q ss_pred ECCCccEEeeec-cCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCe
Q 018248 82 DDHENRYLGELS-FRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKG 159 (359)
Q Consensus 82 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~ 159 (359)
|+.+++.+..+. |...|.++.++++....+ .|+.|++||+.+++.+..+..|...+.++++ +++. +++ |+.|+
T Consensus 185 d~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~--l~~-~~~dg 259 (445)
T 2ovr_B 185 NAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRR--VVS-GAYDF 259 (445)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSC--EEE-EETTS
T ss_pred ECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCE--EEE-EcCCC
Confidence 999999999988 899999999976553333 8999999999999999999999888887777 5544 554 55799
Q ss_pred eEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEE
Q 018248 160 QVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWL 238 (359)
Q Consensus 160 ~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 238 (359)
.|++|+.. +..+..+.+|...|.+++| ++.++++++.|+. |++||+++++.+..+.. |...+.++.+ ++++|
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l 332 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-IRVWDVETGNCIHTLTG--HQSLTSGMEL--KDNIL 332 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-EEEEETTTCCEEEEECC--CCSCEEEEEE--ETTEE
T ss_pred EEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-EEEEECCCCCEEEEEcC--CcccEEEEEE--eCCEE
Confidence 99998875 4677788899999999999 8899999999999 99999999999999886 6678888887 46799
Q ss_pred EEEcCCCcEEEEEccCCCCCCCC-------CccccCCCCCccCCCCCceeeeeEeeeecceEEecc--cceeEE-----e
Q 018248 239 AASSDKGTVHVFGLKVDSGSPGT-------SKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSK--WSMAQF-----R 304 (359)
Q Consensus 239 ~~~~~dg~i~iw~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~ 304 (359)
++++.||.|++||+++++..... ..+.+..+.+.........+ .+ +.|+.. .....+ .
T Consensus 333 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg---~v-----~iwd~~~~~~~~~~~~~~~~ 404 (445)
T 2ovr_B 333 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG---TV-----KLWDLKTGEFIRNLVTLESG 404 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTS---EE-----EEEETTTCCEEEEEEECTTG
T ss_pred EEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCC---eE-----EEEECCCCceeeeeeccccC
Confidence 99999999999999887633211 11122222111000000000 01 122221 112222 2
Q ss_pred ecCCcEEEeeecccCCEEEEEecCCe----EEEEEeCCC
Q 018248 305 LPENVQYLVGFGRQNNTIVIVGLDGS----YYKCEFDPM 339 (359)
Q Consensus 305 ~~~~~v~~~~~s~~~~~l~~~~~dg~----i~v~~~~~~ 339 (359)
.+.+.|.+++|+|++..|++|+.||. +++|+++.+
T Consensus 405 ~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 405 GSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp GGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred CCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 34578999999999999999999997 999999863
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.3e-33 Score=262.18 Aligned_cols=241 Identities=12% Similarity=0.144 Sum_probs=205.3
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|..+|.+++|+|++++|++|+ |+.|++|++.+++... .+. +|...+..++|++++..+++++ .|+.|++||
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~--~~~-~~~~~v~~~~~s~~~~~l~~~~----~dg~i~vw~ 125 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV--DFE-AHPDYIRSIAVHPTKPYVLSGS----DDLTVKLWN 125 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE--EEE-CCSSCEEEEEECSSSSEEEEEE----TTSEEEEEE
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE--EEe-cCCCCEEEEEEeCCCCEEEEEc----CCCEEEEEE
Confidence 5889999999999999999999 9999999999876653 333 7899999999999999888777 789999999
Q ss_pred CCCc-cEEeeec-cCcceeEEEEec-ceeEEE---ecCeEEEEEcccceeeeeEeccC-CCceeeeeecCCCccEEEecC
Q 018248 83 DHEN-RYLGELS-FRSEVKNVRLRR-DRIVVV---LNQKVYVYNFTDLKLVDQIETVV-NPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 83 ~~~~-~~~~~~~-~~~~v~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g 155 (359)
+.++ .....+. |...|.+++|+| ++..++ .|+.|++||+.+++....+..+. ..+..++|+|.++..++++ +
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~ 204 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT-A 204 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEE-E
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEE-E
Confidence 9887 5666666 889999999999 777776 78999999998888777776654 7788999999544445666 6
Q ss_pred CCCeeEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCC
Q 018248 156 LLKGQVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSN 234 (359)
Q Consensus 156 ~~d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 234 (359)
+.||.|++|+.. +..+..+.+|...|.+++|+|++++|++++.||. |++||+.+++.+..+.. +...+.+++|+|+
T Consensus 205 ~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~ 281 (814)
T 3mkq_A 205 SDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNV--GLERSWCIATHPT 281 (814)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCSEEEEECC--SSSSEEEEEECTT
T ss_pred eCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEeec--CCCcEEEEEEccC
Confidence 679999999865 4667788899999999999999999999999999 99999999999998886 6679999999999
Q ss_pred CC--EEEEEcCCCcEEEEEccCCC
Q 018248 235 AQ--WLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 235 ~~--~l~~~~~dg~i~iw~~~~~~ 256 (359)
++ +++++ .++.+.+|++....
T Consensus 282 ~~~~~~~~~-~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 282 GRKNYIASG-FDNGFTVLSLGNDE 304 (814)
T ss_dssp CGGGEEEEE-ETTEEEEEECSCCS
T ss_pred CCceEEEEE-eCCCEEEEEcCCCC
Confidence 87 45554 46679999987654
No 82
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.2e-34 Score=244.82 Aligned_cols=238 Identities=11% Similarity=0.136 Sum_probs=200.2
Q ss_pred CCCCceEEEEEccC----CCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEec-cCCEEEEEecCCCCCCe
Q 018248 4 PDPITIHHLALNQD----HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLF-RSNIICLVNSGPHQSNK 77 (359)
Q Consensus 4 ~h~~~v~~~~~s~~----g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~~d~~ 77 (359)
.|...|.+++|+|+ |++|++|+ |+.|++||+.+++.. ..+. +|...+..++|++ +++.++.++ .|+.
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~-~~~~~i~~~~~~~~~~~~l~s~~----~dg~ 139 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCI--KHYV-GHGNAINELKFHPRDPNLLLSVS----KDHA 139 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEE--EEEE-SCCSCEEEEEECSSCTTEEEEEE----TTSC
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEe--eeec-CCCCcEEEEEECCCCCCEEEEEe----CCCe
Confidence 47789999999999 67899999 999999999987655 3444 7999999999999 778887777 7899
Q ss_pred EEEEECCCccEEeee---c-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEec------------------
Q 018248 78 VMIWDDHENRYLGEL---S-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIET------------------ 132 (359)
Q Consensus 78 i~iwd~~~~~~~~~~---~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~------------------ 132 (359)
|++||+.+++.+..+ . |...|.+++|+|++..++ .|+.|++||+++++....+..
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 999999999998887 4 889999999999998777 789999999987765544433
Q ss_pred ----------cCCCceeeeeecCCCccEEEecCCCCeeEEEEecCC---------------eeeEEeecccccccEEEEc
Q 018248 133 ----------VVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT---------------KKSKYITAHASRIASIAMT 187 (359)
Q Consensus 133 ----------~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~---------------~~~~~~~~~~~~i~~~~~s 187 (359)
+...+..++|+ ++ ++++ ++.|+.|++|+... ..+..+..|...|.+++|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~--~~--~l~~-~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL--GD--LILS-KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE--TT--EEEE-ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE
T ss_pred ccCccccccCCcceEEEEEEc--CC--EEEE-EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc
Confidence 77888888887 33 3555 66799999988754 2366778899999999999
Q ss_pred cC--CcEEEEEeCCCCeEEEEEcCCCc----EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 018248 188 LD--GRFVATASSKGTLIRVFNTMDGS----LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 188 ~~--~~~l~~~~~dg~~i~iwd~~~~~----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 254 (359)
|+ +++|++++.||. |++||+.+++ ....+..+.+...|++++|+|++++|++++.||.|++||+.+
T Consensus 295 ~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 295 MDFWQKMLALGNQVGK-LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ECTTSSEEEEECTTSC-EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCCcEEEEEecCCc-EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 99 999999999999 9999999875 445676644478999999999999999999999999999863
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.6e-33 Score=242.81 Aligned_cols=242 Identities=13% Similarity=0.123 Sum_probs=201.8
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|++|+|+|+|++|++|+ |+.|+|||+++++.. ..+. +|...+.+++ +++..++.++ .|+.+++||
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~--~~~~-~h~~~v~~~s--~~~~~l~sgs----~d~~i~~~d 215 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL--RNMT-SHSARVGSLS--WNSYILSSGS----RSGHIHHHD 215 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEE--EETTEEEEEE----TTSEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE--EEEe-CCCCceEEEe--eCCCEEEEEe----CCCceeEee
Confidence 5778899999999999999999 999999999987655 4444 7888777655 4677777666 789999999
Q ss_pred CCCc-cEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccce----eeeeEeccCCCceeeeeecCCCccEEEe
Q 018248 83 DHEN-RYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLK----LVDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 83 ~~~~-~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
.... ..+..+. |...+..+.++|++..++ .|+.+++|+..+++ .+.....+...+..++|+|.+...+...
T Consensus 216 ~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~ 295 (420)
T 4gga_A 216 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 295 (420)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEE
T ss_pred ecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEE
Confidence 8764 4455566 889999999999998888 79999999997654 3455667788899999999888766555
Q ss_pred cCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEe--CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEe
Q 018248 154 PGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATAS--SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAF 231 (359)
Q Consensus 154 ~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 231 (359)
+|+.|+.|++|+...........+...+.++.|+|+++.+++++ .|+. |+|||+.+++++.++.+ |.+.|++++|
T Consensus 296 ~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~-I~iwd~~~~~~v~~l~g--H~~~V~~l~~ 372 (420)
T 4gga_A 296 GGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELKG--HTSRVLSLTM 372 (420)
T ss_dssp ECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEECC--CSSCEEEEEE
T ss_pred eecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE-EEEEECCCCcEEEEEcC--CCCCEEEEEE
Confidence 57889999999887654444444556789999999999888765 7899 99999999999999987 7889999999
Q ss_pred cCCCCEEEEEcCCCcEEEEEccCCCC
Q 018248 232 SSNAQWLAASSDKGTVHVFGLKVDSG 257 (359)
Q Consensus 232 s~~~~~l~~~~~dg~i~iw~~~~~~~ 257 (359)
+|||++|++|+.|++|+|||+....+
T Consensus 373 spdg~~l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 373 SPDGATVASAAADETLRLWRCFELDP 398 (420)
T ss_dssp CTTSSCEEEEETTTEEEEECCSCSSC
T ss_pred cCCCCEEEEEecCCeEEEEECCCCCc
Confidence 99999999999999999999987553
No 84
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=8.1e-34 Score=245.63 Aligned_cols=286 Identities=12% Similarity=0.109 Sum_probs=222.4
Q ss_pred ceEEEEEccCCCEEEE-ec-CCceEEEEcCCCcce--eeeecccCCCCceeEEEEec-cCCEEEEEecCCCCCCeEEEEE
Q 018248 8 TIHHLALNQDHGCFAT-GT-ETGFRVYLSDPYKPI--MRRDFDRNPRGGTQLVSMLF-RSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~-~~-d~~i~iw~~~~~~~~--~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~~d~~i~iwd 82 (359)
....++++|+...+++ ++ ||.|+||+++..... ....+. +|...|..++|++ +++.++.++ .|+.|++||
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s----~dg~v~vw~ 110 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVC-GHTAPVLDIAWCPHNDNVIASGS----EDCTVMVWE 110 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBC-CCSSCEEEEEECTTCTTEEEEEE----TTSEEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEe-cCCCCEEEEEeCCCCCCEEEEEe----CCCeEEEEE
Confidence 3446888988766654 56 999999999654221 122343 8999999999999 788888777 789999999
Q ss_pred CCCc-------cEEeeec-cCcceeEEEEecce-eEEE---ecCeEEEEEcccceeeeeE--eccCCCceeeeeecCCCc
Q 018248 83 DHEN-------RYLGELS-FRSEVKNVRLRRDR-IVVV---LNQKVYVYNFTDLKLVDQI--ETVVNPTGLCDVSQNAGP 148 (359)
Q Consensus 83 ~~~~-------~~~~~~~-~~~~v~~~~~~~~~-~~~~---~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 148 (359)
+.++ +.+..+. |...|.+++|+|++ .+++ .|+.|++||+.+++.+..+ ..|...+..++|+|+++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 111 IPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp CCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC
T ss_pred ccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE
Confidence 9887 5566776 89999999999998 4555 7999999999999999998 778889999999998876
Q ss_pred cEEEecCCCCeeEEEEecCC-eeeEEe-eccccc-ccEEEEccCCcEEEEE---eCCCCeEEEEEcCCCcE-EEEeecCC
Q 018248 149 MVMACPGLLKGQVRVEDYGT-KKSKYI-TAHASR-IASIAMTLDGRFVATA---SSKGTLIRVFNTMDGSL-LQEMRRGA 221 (359)
Q Consensus 149 ~~l~~~g~~d~~v~~~~~~~-~~~~~~-~~~~~~-i~~~~~s~~~~~l~~~---~~dg~~i~iwd~~~~~~-~~~~~~~~ 221 (359)
+++ ++.|+.|++|+.+. +.+..+ ..|.+. +.+++|+|++++|++| +.|+. |++||+++++. +..... .
T Consensus 191 --l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~-i~iwd~~~~~~~~~~~~~-~ 265 (402)
T 2aq5_A 191 --ICT-SCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ-VALWDTKHLEEPLSLQEL-D 265 (402)
T ss_dssp --EEE-EETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE-EEEEETTBCSSCSEEEEC-C
T ss_pred --EEE-EecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce-EEEEcCccccCCceEEec-c
Confidence 555 55799999998764 566666 678765 8999999999999999 78999 99999988764 323322 2
Q ss_pred CCcceEEEEecCCCCEEE-EEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccce
Q 018248 222 ERAEIYSLAFSSNAQWLA-ASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSM 300 (359)
Q Consensus 222 ~~~~i~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (359)
+...+.+++|+|++++|+ +++.||.|++|++.++++. +. .+.
T Consensus 266 ~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~------------------------~~--------~l~----- 308 (402)
T 2aq5_A 266 TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF------------------------LH--------YLS----- 308 (402)
T ss_dssp CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC------------------------EE--------EEE-----
T ss_pred CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc------------------------eE--------eec-----
Confidence 557899999999999986 4557999999999987621 00 000
Q ss_pred eEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCCCCCCceEEe
Q 018248 301 AQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDPMKGGEMHQL 347 (359)
Q Consensus 301 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~ 347 (359)
.+. +.+.+.+++|+|++.+++ +.++.+++|++.. +.+...
T Consensus 309 -~~~-~~~~v~~~~~sp~~~~~~--s~~~~~~~~~l~~---~~~~~i 348 (402)
T 2aq5_A 309 -MFS-SKESQRGMGYMPKRGLEV--NKCEIARFYKLHE---RKCEPI 348 (402)
T ss_dssp -EEC-CSSCCSEEEECCGGGSCG--GGTEEEEEEEEET---TEEEEE
T ss_pred -ccc-cCCcccceEEecccccce--ecceeEEEEEcCC---CcEEEE
Confidence 011 346789999999998876 4677999999986 445443
No 85
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.8e-32 Score=241.74 Aligned_cols=272 Identities=13% Similarity=0.183 Sum_probs=217.8
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccC--CEEEEEecCCCCCCeEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRS--NIICLVNSGPHQSNKVMI 80 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~~~~~~~~~~d~~i~i 80 (359)
.|...|.+++|+|++ +|++|+ |+.|++||+++++.. ..+. +|...+.++++.+.+ +.++.++ .|+.|++
T Consensus 160 ~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~l~~~~~~~~~~l~s~s----~d~~i~v 231 (464)
T 3v7d_B 160 GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCT--HVFE-GHNSTVRCLDIVEYKNIKYIVTGS----RDNTLHV 231 (464)
T ss_dssp CCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEEEESSSCEEEEEEE----TTSCEEE
T ss_pred CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEE--EEEC-CCCCccEEEEEecCCCCCEEEEEc----CCCcEEE
Confidence 589999999999998 888888 999999999987654 4454 799999999999644 4455554 6899999
Q ss_pred EECCCccE-----------------------Eeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEecc
Q 018248 81 WDDHENRY-----------------------LGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETV 133 (359)
Q Consensus 81 wd~~~~~~-----------------------~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~ 133 (359)
||+.+++. +..+. |...+.++ ++++.+++ .|+.|++||+.+++.+..+..|
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 99987653 22333 66777776 45555555 7999999999999999999999
Q ss_pred CCCceeeeeecCCCccEEEecCCCCeeEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc
Q 018248 134 VNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGS 212 (359)
Q Consensus 134 ~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~ 212 (359)
...+..++++|+++. +++ |+.|+.|++|+.. ++.+..+.+|...|.+++|+ +++|++++.||. |++||+.+++
T Consensus 310 ~~~v~~~~~~~~~~~--l~s-g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~-v~vwd~~~~~ 383 (464)
T 3v7d_B 310 TDRIYSTIYDHERKR--CIS-ASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGS-IRGWDANDYS 383 (464)
T ss_dssp SSCEEEEEEETTTTE--EEE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSE-EEEEETTTCC
T ss_pred CCCEEEEEEcCCCCE--EEE-EeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCc-EEEEECCCCc
Confidence 999999999998875 555 6689999999874 67788899999999999997 579999999999 9999999988
Q ss_pred EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecce
Q 018248 213 LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPK 292 (359)
Q Consensus 213 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (359)
...... +...+..++|+|++++|++++ ||.|++||+++++... .
T Consensus 384 ~~~~~~---~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~--------------------------------~ 427 (464)
T 3v7d_B 384 RKFSYH---HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH--------------------------------A 427 (464)
T ss_dssp EEEEEE---CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEE--------------------------------S
T ss_pred eeeeec---CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEe--------------------------------h
Confidence 777665 456788899999999999988 8999999999987210 0
Q ss_pred EEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeC
Q 018248 293 YFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFD 337 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~ 337 (359)
. +..+.+.|..++|+ +...+++++.||.+++|.++
T Consensus 428 ~---------~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 428 N---------ILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp C---------TTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred h---------hccCCCcEEEEEec-CCEEEEEEEeCCeEEEEEee
Confidence 0 11134678899997 33566666778888888765
No 86
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-33 Score=240.78 Aligned_cols=246 Identities=11% Similarity=0.152 Sum_probs=202.6
Q ss_pred CCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC--CccEEeeec-cCcceeEEEEecc--eeEEE---ecCeEEEE
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH--ENRYLGELS-FRSEVKNVRLRRD--RIVVV---LNQKVYVY 119 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~--~~~~~~~~~-~~~~v~~~~~~~~--~~~~~---~d~~i~i~ 119 (359)
+|...|.+++|+++++.++.++ .|+.|++||+. +++.+..+. |...|.+++|+++ +.+++ .|+.|++|
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~----~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCS----SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEE----TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CCcccEEEEEEcCCCCEEEEEE----CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 8999999999999999888877 78999999987 567777777 8999999999876 77776 78999999
Q ss_pred Ecccce--eeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCe---eeEEeecccccccEEEEcc------
Q 018248 120 NFTDLK--LVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK---KSKYITAHASRIASIAMTL------ 188 (359)
Q Consensus 120 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~---~~~~~~~~~~~i~~~~~s~------ 188 (359)
|+.+++ .+..+..+...+..++|+|+....++++ ++.|+.|++|+.... ....+..|...|.+++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEE-ecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 998886 6777777888999999999832223555 557999999988764 4456778999999999999
Q ss_pred -------CCcEEEEEeCCCCeEEEEEcCCCc----EEEEeecCCCCcceEEEEecCC---CCEEEEEcCCCcEEEEEccC
Q 018248 189 -------DGRFVATASSKGTLIRVFNTMDGS----LLQEMRRGAERAEIYSLAFSSN---AQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 189 -------~~~~l~~~~~dg~~i~iwd~~~~~----~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~iw~~~~ 254 (359)
++.+|++++.|+. |++||++++. ....+.. |...|.+++|+|+ +++|++++.||.|++||+.+
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ------CTTCEEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ccccCCCCCCEEEEEeCCCe-EEEEEecCCCcceeeEEEEec--ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 6999999999999 9999998765 3345554 7789999999999 89999999999999999998
Q ss_pred CCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEE
Q 018248 255 DSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKC 334 (359)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~ 334 (359)
+.... ..... ....+...+..++|+|++++|++++.||.|++|
T Consensus 241 ~~~~~------------------------------~~~~~-------~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw 283 (379)
T 3jrp_A 241 EQGPW------------------------------KKTLL-------KEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 283 (379)
T ss_dssp TTSCC------------------------------EEEES-------SSSCCSSCEEEEEECSSSCCEEEEESSSSEEEE
T ss_pred CCccc------------------------------eeeee-------ccccCCCcEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 65220 00000 011244678999999999999999999999999
Q ss_pred EeCC
Q 018248 335 EFDP 338 (359)
Q Consensus 335 ~~~~ 338 (359)
+++.
T Consensus 284 ~~~~ 287 (379)
T 3jrp_A 284 KENL 287 (379)
T ss_dssp EEEE
T ss_pred eCCC
Confidence 9984
No 87
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-33 Score=244.62 Aligned_cols=293 Identities=9% Similarity=0.073 Sum_probs=222.7
Q ss_pred CCceEEEEEccCCCEEEEecCCceEEEEcCCCc---ceeeeecc------------------------------------
Q 018248 6 PITIHHLALNQDHGCFATGTETGFRVYLSDPYK---PIMRRDFD------------------------------------ 46 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~---~~~~~~~~------------------------------------ 46 (359)
..++.+++|+|||++|+++.++.|++||+.+++ ........
T Consensus 4 ~~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp ECCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred cccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468899999999998887779999999998876 22111100
Q ss_pred ---------------cCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC--CccEEeeec---cCcceeEEEEecc
Q 018248 47 ---------------RNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH--ENRYLGELS---FRSEVKNVRLRRD 106 (359)
Q Consensus 47 ---------------~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~--~~~~~~~~~---~~~~v~~~~~~~~ 106 (359)
++|...|.+++|+++++.++++++ .|+.|++||+. +++.+..+. +...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD---SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEG---GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC---CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 134457999999999998644333 58999999999 888887774 6788999999999
Q ss_pred eeEEE---ecCeEEEEEcccceeee----eEeccCCCceeeeeecC-CCccEEEecCCCCeeEEEEecCC-eeeEE-eec
Q 018248 107 RIVVV---LNQKVYVYNFTDLKLVD----QIETVVNPTGLCDVSQN-AGPMVMACPGLLKGQVRVEDYGT-KKSKY-ITA 176 (359)
Q Consensus 107 ~~~~~---~d~~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~l~~~g~~d~~v~~~~~~~-~~~~~-~~~ 176 (359)
+.+++ .++.|++|++.+++... .+..|...+..++|+|+ ....++++ |+.|+.|++|+... ..+.. +.+
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s-~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIIT-SDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEE-EETTSCEEEEEESCTTCEEEECCC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEE-EcCCCcEEEEECCCCceeeeeecC
Confidence 98877 68999999998776554 67788899999999998 11233555 56799999988764 44555 568
Q ss_pred ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecC-----------------------CCCcceEEEEecC
Q 018248 177 HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRG-----------------------AERAEIYSLAFSS 233 (359)
Q Consensus 177 ~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~-----------------------~~~~~i~~~~~s~ 233 (359)
|...|.+++|+ ++++|++++.|+. |++||+++++.+..+..+ .....|.+++|+|
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~-v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDK-IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSE-EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCe-EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 99999999999 9999999999999 999999999988887632 1235789999999
Q ss_pred CCCEEEEEc-CCCcEEEEEc--cCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcE
Q 018248 234 NAQWLAASS-DKGTVHVFGL--KVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQ 310 (359)
Q Consensus 234 ~~~~l~~~~-~dg~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (359)
++++|++++ .++.|+||++ ..+.. +.. ...+..+ +.+
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~-------------------------l~~--------------~~~~~~~-~~v 357 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQKGD-------------------------LAL--------------KQIITFP-YNV 357 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSSTTC-------------------------EEE--------------EEEEECS-SCE
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCc-------------------------eee--------------ccEeccC-Cce
Confidence 999999998 8999999999 33321 000 1113334 678
Q ss_pred EEeeecccCCEEEEEec------CCeEEEEEeCCCCCCceE
Q 018248 311 YLVGFGRQNNTIVIVGL------DGSYYKCEFDPMKGGEMH 345 (359)
Q Consensus 311 ~~~~~s~~~~~l~~~~~------dg~i~v~~~~~~~~~~~~ 345 (359)
.+++|+|++.++++++. +..|.+|.++.+. ++..
T Consensus 358 ~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~-~~~~ 397 (450)
T 2vdu_B 358 ISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNE-NSFV 397 (450)
T ss_dssp EEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTT-TEEE
T ss_pred EEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCC-CeEE
Confidence 99999996433443333 4568999998754 3443
No 88
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.7e-33 Score=243.20 Aligned_cols=240 Identities=13% Similarity=0.170 Sum_probs=202.4
Q ss_pred CCCCceEEEEEccC----C---CEEEEec-CCceEEEEcCCCcc---eeeeecccCC-----CCceeEEEEe----ccCC
Q 018248 4 PDPITIHHLALNQD----H---GCFATGT-ETGFRVYLSDPYKP---IMRRDFDRNP-----RGGTQLVSML----FRSN 63 (359)
Q Consensus 4 ~h~~~v~~~~~s~~----g---~~l~~~~-d~~i~iw~~~~~~~---~~~~~~~~~h-----~~~v~~~~~~----~~~~ 63 (359)
.|..+|.+++|+|+ + ++|++++ |+.|++|++.+++. .....+. +| ...+..++++ ++++
T Consensus 60 ~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~ 138 (397)
T 1sq9_A 60 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASNDRLLS 138 (397)
T ss_dssp CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC----C
T ss_pred cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeeccCCCCc
Confidence 58899999999999 9 9999999 99999999987654 0023333 56 5889999999 8888
Q ss_pred E-EEEEecCCCCCCeEEEEECCC------ccEEe-----ee-------c-cCcceeEEEEecceeEEE---ecCeEEEEE
Q 018248 64 I-ICLVNSGPHQSNKVMIWDDHE------NRYLG-----EL-------S-FRSEVKNVRLRRDRIVVV---LNQKVYVYN 120 (359)
Q Consensus 64 ~-~~~~~~~~~~d~~i~iwd~~~------~~~~~-----~~-------~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d 120 (359)
. ++.++ .|+.|++||+.+ ++.+. .+ . |...|.+++|+|++ .++ .|+.|++||
T Consensus 139 ~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 139 HRLVATD----VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISE 213 (397)
T ss_dssp EEEEEEE----TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEE
T ss_pred eEEEEEe----CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEE
Confidence 8 77766 689999999988 66555 55 2 68899999999999 666 789999999
Q ss_pred cccceeeeeEec---c---CCCceeeeeecCCCccEEEecCCCC---eeEEEEecC-CeeeEEeec-------------c
Q 018248 121 FTDLKLVDQIET---V---VNPTGLCDVSQNAGPMVMACPGLLK---GQVRVEDYG-TKKSKYITA-------------H 177 (359)
Q Consensus 121 ~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~l~~~g~~d---~~v~~~~~~-~~~~~~~~~-------------~ 177 (359)
+++++.+..+.. | ...+..++|+|++.. +++ ++.| +.|++|+.. .+.+..+.. |
T Consensus 214 ~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~--l~~-~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (397)
T 1sq9_A 214 LSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL--LAI-AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 290 (397)
T ss_dssp TTTTEEEEEEECCC---CCCCCEEEEEECSSTTE--EEE-EEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB
T ss_pred CCCCceeEEEeccccccccCCccceEEECCCCCE--EEE-EecCCCCceEEEEECCCCcccceeccCccccccccccccc
Confidence 999999999988 7 888999999998764 554 5568 999999875 466777887 9
Q ss_pred cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEee------cCCC---------------CcceEEEEecCCC-
Q 018248 178 ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMR------RGAE---------------RAEIYSLAFSSNA- 235 (359)
Q Consensus 178 ~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~------~~~~---------------~~~i~~~~~s~~~- 235 (359)
...|.+++|+|++++|++++.|+. |++||+++++.+..+. . | ...|++++|+|++
T Consensus 291 ~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 291 SSWVMSLSFNDSGETLCSAGWDGK-LRFWDVKTKERITTLNMHCDDIE--IEEDILAVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSE-EEEEETTTTEEEEEEECCGGGCS--SGGGCCCBCTTSCBCSSCCEEEEEEECTTT
T ss_pred CCcEEEEEECCCCCEEEEEeCCCe-EEEEEcCCCceeEEEecccCccc--chhhhhccccccccccCCceeEEEeccccc
Confidence 999999999999999999999999 9999999999999988 4 4 7899999999998
Q ss_pred ---------CEEEEEcCCCcEEEEEccCC
Q 018248 236 ---------QWLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 236 ---------~~l~~~~~dg~i~iw~~~~~ 255 (359)
++|++++.||.|++|+++++
T Consensus 368 ~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 368 RSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp SBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccccccccceEEEecCCCcEEEEEcCCC
Confidence 79999999999999999875
No 89
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-34 Score=268.52 Aligned_cols=246 Identities=13% Similarity=0.179 Sum_probs=202.5
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEecc--CCEEEEEecCCCCCCeEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFR--SNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~~~~~~~~d~~i~ 79 (359)
..|.++|++++|+|+|++|++|+ ||.|+||++.+........+. +|.+.|..++|+++ ++.++.++ .||.|+
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~~~l~s~s----~Dg~I~ 80 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCS----YDGKVL 80 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCTTSCSEEEEEE----TTSCEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc-CCcCceEEEEecCCCCCCEEEEEe----CCCeEE
Confidence 47999999999999999999999 999999999865555555665 89999999999987 77777777 789999
Q ss_pred EEECCCcc--EEeeec-cCcceeEEEEecc--eeEEE---ecCeEEEEEcccce--eeeeEeccCCCceeeeeecC----
Q 018248 80 IWDDHENR--YLGELS-FRSEVKNVRLRRD--RIVVV---LNQKVYVYNFTDLK--LVDQIETVVNPTGLCDVSQN---- 145 (359)
Q Consensus 80 iwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~~~---~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~---- 145 (359)
+||+.+++ .+..+. |...|.+++|+|+ +..++ .||.|++||+.++. ....+..+...+..++|+|.
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 99999886 555555 8899999999998 77776 88999999997763 34455678888999999984
Q ss_pred ---------CCccEEEecCCCCeeEEEEecCC-----eeeEEeecccccccEEEEccC---CcEEEEEeCCCCeEEEEEc
Q 018248 146 ---------AGPMVMACPGLLKGQVRVEDYGT-----KKSKYITAHASRIASIAMTLD---GRFVATASSKGTLIRVFNT 208 (359)
Q Consensus 146 ---------~~~~~l~~~g~~d~~v~~~~~~~-----~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~~i~iwd~ 208 (359)
+.. +++ |+.||.|++|+... .....+.+|...|.+++|+|+ +++|++++.||. |++||+
T Consensus 161 ~~~~~~~~d~~~--l~s-gs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~-I~iwd~ 236 (753)
T 3jro_A 161 DGEHNGTKESRK--FVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWTQ 236 (753)
T ss_dssp ------CGGGCC--EEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC-EEEEEE
T ss_pred ccccccCCCCCE--EEE-EECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE-EEEecC
Confidence 443 555 56799999988754 445677889999999999999 899999999999 999999
Q ss_pred CCCcEE---EEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCC
Q 018248 209 MDGSLL---QEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSG 257 (359)
Q Consensus 209 ~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~ 257 (359)
++++.. .......|...|++++|+|+|++|++++.||.|++|++.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSC
T ss_pred CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCC
Confidence 886421 1122223677999999999999999999999999999997553
No 90
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-34 Score=248.49 Aligned_cols=257 Identities=12% Similarity=0.033 Sum_probs=204.0
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
+-...|.+++|+|||+++|+++ |++|+ +....+ .+. +|...+..++++|++ . ++.+.+|+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~-----~l~-gh~~~v~~V~FsPdg------~-----~~~~~~~~ 73 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK-----DIN-CNSKNLFHVKEFPLE------F-----ENKLDFEL 73 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS-----CCS-SBGGGTEEEEEECCC------C-----CCTTTTSC
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccc-----eec-CCCccEEEEEECCCC------C-----cceEEEEe
Confidence 4567899999999999999999 99999 655432 233 899999999998877 1 46666666
Q ss_pred CCCccEEeeeccCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCC-----CceeeeeecCCCccEEEec
Q 018248 83 DHENRYLGELSFRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVN-----PTGLCDVSQNAGPMVMACP 154 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~ 154 (359)
.. +.....+.+...|.+++|+|+|..++ .||.|++||.+. ++..+. |.. .+..++|+|+++. |++
T Consensus 74 ~~-~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~--LAs- 146 (588)
T 2j04_A 74 AQ-QNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESS--IVV- 146 (588)
T ss_dssp CC-SSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSC--EEE-
T ss_pred CC-CceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCE--EEE-
Confidence 33 33344445688899999999999888 899999999543 555555 554 4889999999886 665
Q ss_pred CCCCeeEEEEecCCee--------eEEe----ecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcE---EEEeec
Q 018248 155 GLLKGQVRVEDYGTKK--------SKYI----TAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSL---LQEMRR 219 (359)
Q Consensus 155 g~~d~~v~~~~~~~~~--------~~~~----~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~---~~~~~~ 219 (359)
|+.||+|++|+...+. +..+ .+|...|.+++|+||| +++++.|+. |++||+.+++. ..++..
T Consensus 147 gs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~t-VrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 147 GNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNS-VFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp EETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCC-EEEECCCSSSSCCCEEEEEC
T ss_pred EcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCe-EEEEECCCCccccceeeecc
Confidence 5689999999988763 4665 5677899999999999 788899999 99999988773 345642
Q ss_pred CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccc
Q 018248 220 GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWS 299 (359)
Q Consensus 220 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (359)
+ |...|.+++|+ |+.|++++ +++|++||+.++...
T Consensus 224 ~-h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~----------------------------------------- 258 (588)
T 2j04_A 224 A-SRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSIS----------------------------------------- 258 (588)
T ss_dssp C-CSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEE-----------------------------------------
T ss_pred c-ccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEE-----------------------------------------
Confidence 2 66899999999 68999887 699999999986510
Q ss_pred eeEEe-ecCCcEEEeee--cccCCEEEEEecCCeEEEEEeC
Q 018248 300 MAQFR-LPENVQYLVGF--GRQNNTIVIVGLDGSYYKCEFD 337 (359)
Q Consensus 300 ~~~~~-~~~~~v~~~~~--s~~~~~l~~~~~dg~i~v~~~~ 337 (359)
.+. .|.+.+..++| +||+..|+++++||+ ++|.++
T Consensus 259 --~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 259 --SLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp --EEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred --EEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 011 35678899999 999999999999999 999875
No 91
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=9.1e-33 Score=234.04 Aligned_cols=282 Identities=10% Similarity=0.068 Sum_probs=201.2
Q ss_pred CCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCc----cEEeeec-cCcceeEEEEec--ceeEEE---ecCeEE
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHEN----RYLGELS-FRSEVKNVRLRR--DRIVVV---LNQKVY 117 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~----~~~~~~~-~~~~v~~~~~~~--~~~~~~---~d~~i~ 117 (359)
+|.+.|.+++|+++++.++.++ .|+.|++||+.++ +.+..+. |...|.+++|+| ++.+++ .|+.|+
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCS----SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEE----TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccccceeEEEEcCCCCEEEEee----CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 8999999999999999888877 7899999999876 4555666 899999999999 577666 799999
Q ss_pred EEEcccc---------eeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCC-eeeEEe-------------
Q 018248 118 VYNFTDL---------KLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYI------------- 174 (359)
Q Consensus 118 i~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~------------- 174 (359)
+||+.++ +.+..+..+...+..++|+|+....++++ ++.|+.|++|+... +.+..+
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLAC-LGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEE-ecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 9999776 56777888899999999999832233555 55799999998654 221111
Q ss_pred ecccccccEEEEccC---CcEEEEEeCCCCeEEEEEcCCCcE--EEEeecCCCCcceEEEEecCCC----CEEEEEcCCC
Q 018248 175 TAHASRIASIAMTLD---GRFVATASSKGTLIRVFNTMDGSL--LQEMRRGAERAEIYSLAFSSNA----QWLAASSDKG 245 (359)
Q Consensus 175 ~~~~~~i~~~~~s~~---~~~l~~~~~dg~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg 245 (359)
..|...+.+++|+|+ +.++++++.++. +.+|+...++. +..+.. |...|++++|+|++ ++|++++.||
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~--h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQA-IIYQRGKDGKLHVAAKLPG--HKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEE-EEEEECTTSCEEEEEECCC--CCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCc-EEEEccCCCceeeeeecCC--CCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 257788999999997 899999999998 88888777765 445554 78899999999998 8999999999
Q ss_pred cEEEEEccCCCCCCCCCc-ccc---CCCCCcc---CCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeeccc
Q 018248 246 TVHVFGLKVDSGSPGTSK-LHS---ASEPNLS---SKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQ 318 (359)
Q Consensus 246 ~i~iw~~~~~~~~~~~~~-~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 318 (359)
.|++||++.+........ ... ....+.. ..+............+.. ........++.|.+.|.+++|+|+
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSN---LQVELLSEHDDHNGEVWSVSWNLT 317 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCS---EEEEEEEEECTTSSCEEEEEECSS
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeeccc---ccccEEEEEecccccEEEEEEcCC
Confidence 999999998653321100 000 0000000 000000000000000000 001122335556789999999999
Q ss_pred CCEEEEEecCCeEEEEEeCCCC
Q 018248 319 NNTIVIVGLDGSYYKCEFDPMK 340 (359)
Q Consensus 319 ~~~l~~~~~dg~i~v~~~~~~~ 340 (359)
+++|++++.||.|++|++...+
T Consensus 318 ~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 318 GTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp SCCEEEEETTSCEEEEEECTTS
T ss_pred CCEEEEecCCCcEEEEecCcCc
Confidence 9999999999999999998743
No 92
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5e-32 Score=226.84 Aligned_cols=242 Identities=12% Similarity=0.120 Sum_probs=202.0
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
..|...|.+++|+|++++|++|+ |+.|++|++++++.. ..+. +|...+.. +.+.+..++..+ .++.+++|
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~--~~~~-~h~~~~~~--~~~~~~~l~s~~----~~~~~~~~ 134 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL--RNMT-SHSARVGS--LSWNSYILSSGS----RSGHIHHH 134 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEE--EEEETTEEEEEE----TTSEEEEE
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE--EEec-CccceEEE--eecCCCEEEEEe----cCCceEee
Confidence 35788899999999999999999 999999999987655 3444 67776654 555677777666 68999999
Q ss_pred ECCCc-cEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEccccee----eeeEeccCCCceeeeeecCCCccEEE
Q 018248 82 DDHEN-RYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKL----VDQIETVVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 82 d~~~~-~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (359)
+.... ..+..+. |...+..+.+++++.+++ .|+.|++||+++++. ......+...+..+++++.+...+..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 214 (318)
T 4ggc_A 135 DVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT 214 (318)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEE
T ss_pred ecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEE
Confidence 98776 4444555 889999999999998887 899999999977653 33344566778888999988876666
Q ss_pred ecCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEe--CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEE
Q 018248 153 CPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATAS--SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLA 230 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 230 (359)
.+++.++.|++|+...........+...+..+.|+|++..+++++ .|+. |++||+++++++.++.+ |.+.|++++
T Consensus 215 ~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~-i~iwd~~~~~~~~~l~g--H~~~V~~l~ 291 (318)
T 4ggc_A 215 GGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELKG--HTSRVLSLT 291 (318)
T ss_dssp EECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEECC--CSSCEEEEE
T ss_pred EecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCE-EEEEECCCCcEEEEEcC--CCCCEEEEE
Confidence 568889999999998877777777888999999999999887765 7899 99999999999999987 788999999
Q ss_pred ecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 231 FSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 231 ~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
|+|||++|++++.||+|+|||+....
T Consensus 292 ~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 292 MSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp ECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EcCCCCEEEEEecCCeEEEEECCCCC
Confidence 99999999999999999999997654
No 93
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.4e-32 Score=253.87 Aligned_cols=238 Identities=17% Similarity=0.237 Sum_probs=195.6
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++|+|+|++|++|+ |+.|+|||+.++... ..+. +|...|..++++++++.++.++ .|++|++||
T Consensus 428 ~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~--~~~~-~h~~~v~~~~~s~~~~~l~s~s----~D~~i~iwd 500 (694)
T 3dm0_A 428 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST--RRFV-GHTKDVLSVAFSLDNRQIVSAS----RDRTIKLWN 500 (694)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEECTTSSCEEEEE----TTSCEEEEC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce--eEEe-CCCCCEEEEEEeCCCCEEEEEe----CCCEEEEEE
Confidence 5889999999999999999999 999999999876554 4444 8999999999999999988887 789999999
Q ss_pred CCCccEEeee----ccCcceeEEEEecce--eEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEe
Q 018248 83 DHENRYLGEL----SFRSEVKNVRLRRDR--IVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 83 ~~~~~~~~~~----~~~~~v~~~~~~~~~--~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
.......... .|...|.+++|+|++ ..++ .|+.|++||+++++....+..|...+..++++|+++. +++
T Consensus 501 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~--l~s 578 (694)
T 3dm0_A 501 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSL--CAS 578 (694)
T ss_dssp TTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE--EEE
T ss_pred CCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCE--EEE
Confidence 7655433322 277889999999986 3444 7999999999999999999999999999999998864 665
Q ss_pred cCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCC-----------
Q 018248 154 PGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGA----------- 221 (359)
Q Consensus 154 ~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~----------- 221 (359)
|+.|+.|++|+... +.+..+ .+...+.+++|+|++.+|++++ ++. |++||+++++.+..+..+.
T Consensus 579 -g~~Dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~-~~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (694)
T 3dm0_A 579 -GGKDGVVLLWDLAEGKKLYSL-EANSVIHALCFSPNRYWLCAAT-EHG-IKIWDLESKSIVEDLKVDLKAEAEKADNSG 654 (694)
T ss_dssp -EETTSBCEEEETTTTEEEECC-BCSSCEEEEEECSSSSEEEEEE-TTE-EEEEETTTTEEEEEECCCCC----------
T ss_pred -EeCCCeEEEEECCCCceEEEe-cCCCcEEEEEEcCCCcEEEEEc-CCC-EEEEECCCCCChhhhccccccccccccccc
Confidence 66899999999865 444444 3567899999999999887765 556 9999999999887775321
Q ss_pred ------CCcceEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 018248 222 ------ERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 222 ------~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 254 (359)
+...+++++|+|+|++|++|+.||.|+||++..
T Consensus 655 ~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 655 PAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp ------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 111378999999999999999999999999863
No 94
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-31 Score=230.63 Aligned_cols=256 Identities=10% Similarity=0.115 Sum_probs=201.4
Q ss_pred eecccCCCCceeEEEEeccC-CEEEEEecCCCCCCeEEEEECCCccEEeeec---cCcceeEEEEec-ceeEEE---ecC
Q 018248 43 RDFDRNPRGGTQLVSMLFRS-NIICLVNSGPHQSNKVMIWDDHENRYLGELS---FRSEVKNVRLRR-DRIVVV---LNQ 114 (359)
Q Consensus 43 ~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~-~~~~~~---~d~ 114 (359)
..+. +|...|.+++|++++ +.++.++ .|+.|++||+.+++....+. |...|.+++|+| ++.+++ .|+
T Consensus 67 ~~~~-~h~~~v~~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 67 RTAS-PFDRRVTSLEWHPTHPTTVAVGS----KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEEC-CCSSCEEEEEECSSCTTEEEEEE----BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred Eecc-CCCCCEEEEEECCCCCCEEEEEc----CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 3444 899999999999998 7777777 68999999999888777664 889999999999 667776 799
Q ss_pred eEEEEEcccceeeeeEeccC---CCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCc
Q 018248 115 KVYVYNFTDLKLVDQIETVV---NPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGR 191 (359)
Q Consensus 115 ~i~i~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 191 (359)
.|++||+.+ +.+..+..+. ..+..++|+|+++. +++ |+.|+.|++|+.+++.+..+..|...|.+++|+|+++
T Consensus 142 ~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 142 ATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQM--LAT-GDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp EEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTE--EEE-EETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCT
T ss_pred EEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCE--EEE-ECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCC
Confidence 999999975 4555554433 67889999998874 555 6679999999999999999999999999999999999
Q ss_pred -EEEEEeCCCCeEEEEEcCC----CcEEEEeecCCCCcceEEEEecC-CCCEEEEEcCCCcEEEEEccCCCCCCCCCccc
Q 018248 192 -FVATASSKGTLIRVFNTMD----GSLLQEMRRGAERAEIYSLAFSS-NAQWLAASSDKGTVHVFGLKVDSGSPGTSKLH 265 (359)
Q Consensus 192 -~l~~~~~dg~~i~iwd~~~----~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 265 (359)
+|++++.|+. |++||+++ +..+..+. |...|.+++|+| ++++|++++.|+.|++||+++++.........
T Consensus 218 ~~l~s~~~d~~-i~iwd~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 218 WLMATSSVDAT-VKLWDLRNIKDKNSYIAEMP---HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp TEEEEEETTSE-EEEEEGGGCCSTTCEEEEEE---CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred CEEEEEeCCCE-EEEEeCCCCCcccceEEEec---CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccc
Confidence 9999999999 99999998 66776663 778999999999 99999999999999999999876431000000
Q ss_pred cCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 266 SASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
.........+...-.|.+.+..++|+|++++ +++.||.|++|++..
T Consensus 294 -------------------------~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~ 339 (383)
T 3ei3_B 294 -------------------------HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANS 339 (383)
T ss_dssp -------------------------BCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTT
T ss_pred -------------------------ccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCC
Confidence 0000000000001123356677899999888 888999999999865
No 95
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.4e-31 Score=233.98 Aligned_cols=279 Identities=12% Similarity=0.097 Sum_probs=219.5
Q ss_pred CCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeee---ecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 6 PITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRR---DFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
...+.+++|+|++.++++++ ++.|++||+++++..... .+. +|...+..+++.+++..++..+ .|+.|++|
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~s~~----~d~~v~~~ 196 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYK-KKLGFVETISIPEHNELWVSQM----QANAVHVF 196 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHH-TTCCEEEEEEEGGGTEEEEEEG----GGTEEEEE
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCccccc-ccCCceeEEEEcCCCEEEEEEC----CCCEEEEE
Confidence 34567899999777778887 889999999987655322 222 7888999999987776666555 57999999
Q ss_pred ECCCccEEeeec-cCcceeEEEEecceeEEE----ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCC
Q 018248 82 DDHENRYLGELS-FRSEVKNVRLRRDRIVVV----LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGL 156 (359)
Q Consensus 82 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 156 (359)
|+.+++.+..+. +...+.+++|+|++..++ .++.|++||+.+++.+..+..+ ..+..++++|+++.++++..+.
T Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~ 275 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSA 275 (433)
T ss_dssp ETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEES
T ss_pred ECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCC
Confidence 999999988887 788999999999987664 5799999999999888777654 3467889999887644333111
Q ss_pred -----CCeeEEEEecCCeeeEEeecccccccEEEEccCCcEE-EEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEE
Q 018248 157 -----LKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFV-ATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLA 230 (359)
Q Consensus 157 -----~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~ 230 (359)
.|+.|++|+...........|...+.+++|+|+++.+ ++++.++. |++||+.+++.+..+. +...+.+++
T Consensus 276 ~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-v~v~d~~~~~~~~~~~---~~~~~~~~~ 351 (433)
T 3bws_A 276 SNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSK-IEVYDLKEKKVQKSIP---VFDKPNTIA 351 (433)
T ss_dssp CTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTE-EEEEETTTTEEEEEEE---CSSSEEEEE
T ss_pred CccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCE-EEEEECCCCcEEEEec---CCCCCCeEE
Confidence 4889999998765555555667789999999999755 66688998 9999999999888876 456799999
Q ss_pred ecCCCCEEEEEcC---------------CCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEe
Q 018248 231 FSSNAQWLAASSD---------------KGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFS 295 (359)
Q Consensus 231 ~s~~~~~l~~~~~---------------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (359)
|+|+|++|++++. ||.|++||+.+++.. ..
T Consensus 352 ~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~---------------------------------~~-- 396 (433)
T 3bws_A 352 LSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK---------------------------------EF-- 396 (433)
T ss_dssp ECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE---------------------------------EE--
T ss_pred EcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE---------------------------------EE--
Confidence 9999998888876 579999999876511 00
Q ss_pred cccceeEEeecCCcEEEeeecccCCEEEEEec-CCeEEEEEeC
Q 018248 296 SKWSMAQFRLPENVQYLVGFGRQNNTIVIVGL-DGSYYKCEFD 337 (359)
Q Consensus 296 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~v~~~~ 337 (359)
+.. ...+..++|+|++++|++++. ||.|++|+++
T Consensus 397 -------~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 397 -------WEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp -------EEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred -------ecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 111 246789999999999998876 9999999986
No 96
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.4e-32 Score=238.30 Aligned_cols=293 Identities=12% Similarity=0.083 Sum_probs=218.3
Q ss_pred CceEEEEEccCC----------CEEEEec-C----CceEEEEcC--------------------------CCcceeeeec
Q 018248 7 ITIHHLALNQDH----------GCFATGT-E----TGFRVYLSD--------------------------PYKPIMRRDF 45 (359)
Q Consensus 7 ~~v~~~~~s~~g----------~~l~~~~-d----~~i~iw~~~--------------------------~~~~~~~~~~ 45 (359)
-+..++.|.|+. .++++|+ . +.|.+++++ +++......+
T Consensus 46 wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 125 (430)
T 2xyi_A 46 WPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKI 125 (430)
T ss_dssp SCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEEE
T ss_pred CCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEEE
Confidence 356788898875 4678876 2 347777543 0111112223
Q ss_pred ccCCCCceeEEEEecc-CCEEEEEecCCCCCCeEEEEECCC----------ccEEeeec-cCcceeEEEEeccee-EEE-
Q 018248 46 DRNPRGGTQLVSMLFR-SNIICLVNSGPHQSNKVMIWDDHE----------NRYLGELS-FRSEVKNVRLRRDRI-VVV- 111 (359)
Q Consensus 46 ~~~h~~~v~~~~~~~~-~~~~~~~~~~~~~d~~i~iwd~~~----------~~~~~~~~-~~~~v~~~~~~~~~~-~~~- 111 (359)
+|.+.|..++++++ ++.++.++ .+|.|++||+.+ .+.+..+. |...|.+++|+|++. +++
T Consensus 126 --~h~~~v~~l~~~p~~~~~lat~~----~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 126 --NHEGEVNRARYMPQNACVIATKT----PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp --EESSCCSEEEEETTEEEEEEEEC----SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred --cCCCcEEEEEECCCCCcEEEEEC----CCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 68999999999986 44555554 689999999876 56666666 889999999999986 555
Q ss_pred --ecCeEEEEEccccee-------eeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCC----eeeEEeeccc
Q 018248 112 --LNQKVYVYNFTDLKL-------VDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT----KKSKYITAHA 178 (359)
Q Consensus 112 --~d~~i~i~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~----~~~~~~~~~~ 178 (359)
.||.|++||+..+.. ...+..|...+..++|+|++... +++ ++.|+.|++|+.+. .....+..|.
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~-l~s-~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESL-FGS-VADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTE-EEE-EETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCE-EEE-EeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 799999999976322 34566788889999999966543 444 55799999999875 3667778999
Q ss_pred ccccEEEEccCCc-EEEEEeCCCCeEEEEEcCC-CcEEEEeecCCCCcceEEEEecCCCC-EEEEEcCCCcEEEEEccCC
Q 018248 179 SRIASIAMTLDGR-FVATASSKGTLIRVFNTMD-GSLLQEMRRGAERAEIYSLAFSSNAQ-WLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 179 ~~i~~~~~s~~~~-~l~~~~~dg~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~ 255 (359)
..|++++|+|+++ +|++|+.||. |++||+++ ...+..+.. |...|.+++|+|+++ +|++++.|+.|+|||+...
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~-v~vwd~~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCe-EEEEeCCCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 9999999999987 7899999999 99999998 566777776 678999999999985 7999999999999999885
Q ss_pred CCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCC-EEEEEecCCeEEEE
Q 018248 256 SGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNN-TIVIVGLDGSYYKC 334 (359)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~v~ 334 (359)
......... ... . ......+..+.+.|..++|+|+++ .|++++.||.|++|
T Consensus 355 ~~~~~~~~~--------------~~~--------~------~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 355 GEEQSTEDA--------------EDG--------P------PELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp TCCCCHHHH--------------HHC--------C------TTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred ccccCcccc--------------ccC--------C------cceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEe
Confidence 422100000 000 0 001111234567899999999998 89999999999999
Q ss_pred EeCC
Q 018248 335 EFDP 338 (359)
Q Consensus 335 ~~~~ 338 (359)
+++.
T Consensus 407 ~~~~ 410 (430)
T 2xyi_A 407 QMAE 410 (430)
T ss_dssp EECH
T ss_pred Eccc
Confidence 9864
No 97
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.6e-34 Score=243.40 Aligned_cols=239 Identities=13% Similarity=0.086 Sum_probs=189.7
Q ss_pred CCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCc--cEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcc
Q 018248 49 PRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHEN--RYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFT 122 (359)
Q Consensus 49 h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~--~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~ 122 (359)
|.+.|.+++++++++.++.++ .|+.|++||+.++ +.+..+. |...|.+++|+|++.+++ .|+.|++||+.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~----~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTT----ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCC----SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred CCCcEEEEEECCCCCEEEEec----CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 467899999999998877666 6899999999988 6777777 899999999999998777 78999999998
Q ss_pred cce---eeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCee----eEEeec-ccccccEEEEccCCcEEE
Q 018248 123 DLK---LVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKK----SKYITA-HASRIASIAMTLDGRFVA 194 (359)
Q Consensus 123 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~----~~~~~~-~~~~i~~~~~s~~~~~l~ 194 (359)
+++ ....+..|...+..++|+|+++. +++ ++.|+.|++|+.+... ...+.. |...|.+++|+|++++|+
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDK--FAV-GSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSC--CEE-EESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCE--EEE-EecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 876 56667778889999999998876 444 5579999999887653 677777 999999999999999999
Q ss_pred EEeCCCCeEEEEEcC------------------CCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 195 TASSKGTLIRVFNTM------------------DGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 195 ~~~~dg~~i~iwd~~------------------~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
+++.|+. |++||+. .++++..+ . |...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 163 ~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 163 AGCADRK-AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P--SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp EEESSSC-EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C--CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred EEeCCCE-EEEEEEEecccCCCccccccccccchhhhhhcc-c--CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 9999999 9999985 34455555 3 77899999999999999999999999999999876
Q ss_pred CCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEe
Q 018248 257 GSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~ 336 (359)
... .....+..+...+.+++|+|++++|++++.++.+ +|..
T Consensus 239 ~~~--------------------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 239 QPP--------------------------------------RALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp SCE--------------------------------------EECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred Ccc--------------------------------------eeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 310 0011244566789999999999999988777655 7766
Q ss_pred C
Q 018248 337 D 337 (359)
Q Consensus 337 ~ 337 (359)
.
T Consensus 280 ~ 280 (377)
T 3dwl_C 280 N 280 (377)
T ss_dssp C
T ss_pred C
Confidence 5
No 98
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.2e-32 Score=227.35 Aligned_cols=242 Identities=17% Similarity=0.202 Sum_probs=197.2
Q ss_pred CCCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 3 QPDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 3 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
..|...|.+++|+|+|++|++|+ |+.|++|+........... .+...+....+.+.++.++.++ .|+.+++|
T Consensus 83 ~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~s~s----~d~~~~~~ 155 (340)
T 4aow_A 83 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV---GHTKDVLSVAFSSDNRQIVSGS----RDKTIKLW 155 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---CCSSCEEEEEECTTSSCEEEEE----TTSCEEEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec---CCCCceeEEEEeecCccceeec----CCCeEEEE
Confidence 35889999999999999999999 9999999998765554433 4577788888888888888777 78999999
Q ss_pred ECCCccEEeee-c-cCcceeEEEEecce--eEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEec
Q 018248 82 DDHENRYLGEL-S-FRSEVKNVRLRRDR--IVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACP 154 (359)
Q Consensus 82 d~~~~~~~~~~-~-~~~~v~~~~~~~~~--~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 154 (359)
|+......... . |...+..++|++++ .+++ .|+.|++||+++++.+..+..|...+..++|+|+++. +++
T Consensus 156 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~--l~s- 232 (340)
T 4aow_A 156 NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL--CAS- 232 (340)
T ss_dssp CTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE--EEE-
T ss_pred EeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCE--EEE-
Confidence 98766544332 3 78899999998764 3443 7899999999999999999999999999999998864 555
Q ss_pred CCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec-------CCCCcceE
Q 018248 155 GLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR-------GAERAEIY 227 (359)
Q Consensus 155 g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~-------~~~~~~i~ 227 (359)
|+.|+.|++|+...........+...+.+++|+|++.++ +++.|+. |++||++++..+..+.. ..|...|+
T Consensus 233 ~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (340)
T 4aow_A 233 GGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQCT 310 (340)
T ss_dssp EETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTE-EEEEETTTTEEEEEECCC-------CCCCCEE
T ss_pred EeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCE-EEEEECCCCeEEEeccccceeeeccCCCCCEE
Confidence 667999999998764444434456789999999998765 5567888 99999998887776643 23678999
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 228 SLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 228 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
+++|+|||++|++|+.||.|+|||++++.
T Consensus 311 ~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 311 SLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999999999999999875
No 99
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.3e-32 Score=232.27 Aligned_cols=238 Identities=16% Similarity=0.134 Sum_probs=200.2
Q ss_pred CCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc--EEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEc
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR--YLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNF 121 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~ 121 (359)
.|..+|.+++++++++.+++++ .|+.|++||+.+++ .+..+. |...|.+++|+|++.+++ .|+.|++||+
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~----~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICP----NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEEC----SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEe----CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 4789999999999999888877 68999999998887 777777 899999999999998877 7899999999
Q ss_pred ccceeeeeE--eccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCee----eEE-eecccccccEEEEccCCcEEE
Q 018248 122 TDLKLVDQI--ETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKK----SKY-ITAHASRIASIAMTLDGRFVA 194 (359)
Q Consensus 122 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~----~~~-~~~~~~~i~~~~~s~~~~~l~ 194 (359)
.+++....+ ..+...+..++|+|+++. +++ ++.|+.|++|+.+... ... ...|...|.+++|+|++++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~-~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 158 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKK--FAV-GSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA 158 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSE--EEE-EETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCE--EEE-EeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE
Confidence 888755444 457778899999998764 555 5579999998876533 233 367889999999999999999
Q ss_pred EEeCCCCeEEEEEc------------------CCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 195 TASSKGTLIRVFNT------------------MDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 195 ~~~~dg~~i~iwd~------------------~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
+++.|+. |++||+ ..++.+..+.. |...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 159 ~~~~dg~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 159 AGSCDFK-CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS--SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp EEETTSC-EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC--CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT
T ss_pred EEcCCCC-EEEEEcccccccccccccccccccchhhheEecCC--CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 9999999 999995 46788888875 77899999999999999999999999999999876
Q ss_pred CCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEe
Q 018248 257 GSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~ 336 (359)
.. ..+..+...+..++|+|++++|+++ .||.|++|++
T Consensus 236 ~~------------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~ 272 (372)
T 1k8k_C 236 AV------------------------------------------ATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTY 272 (372)
T ss_dssp EE------------------------------------------EEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEE
T ss_pred ee------------------------------------------EEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEc
Confidence 21 1133455688999999999888877 9999999999
Q ss_pred CC
Q 018248 337 DP 338 (359)
Q Consensus 337 ~~ 338 (359)
..
T Consensus 273 ~~ 274 (372)
T 1k8k_C 273 DS 274 (372)
T ss_dssp ET
T ss_pred cC
Confidence 76
No 100
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=228.15 Aligned_cols=239 Identities=9% Similarity=0.096 Sum_probs=203.5
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCC-----Ce
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQS-----NK 77 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d-----~~ 77 (359)
.|...|.+++|+|++++|++++ |+.|++||+.+++...... |...+..++++++++.++.++ .+ +.
T Consensus 72 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~----~~~~~~~g~ 143 (369)
T 3zwl_B 72 GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK----SPVPVKRVEFSPCGNYFLAIL----DNVMKNPGS 143 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSSEEEEEE----CCBTTBCCE
T ss_pred hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee----cCCCeEEEEEccCCCEEEEec----CCccCCCCE
Confidence 5889999999999999999999 9999999999876654333 578999999999999888877 45 99
Q ss_pred EEEEECCCccE-----------Eeeec-cCc--ceeEEEEecceeEEE---ecCeEEEEEccc-ceeeeeEeccCCCcee
Q 018248 78 VMIWDDHENRY-----------LGELS-FRS--EVKNVRLRRDRIVVV---LNQKVYVYNFTD-LKLVDQIETVVNPTGL 139 (359)
Q Consensus 78 i~iwd~~~~~~-----------~~~~~-~~~--~v~~~~~~~~~~~~~---~d~~i~i~d~~~-~~~~~~~~~~~~~~~~ 139 (359)
|++||+.++.. +..+. +.. .+.+++|+|++.+++ .|+.|++||+.+ .+.+..+..+...+..
T Consensus 144 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 223 (369)
T 3zwl_B 144 INIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISD 223 (369)
T ss_dssp EEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEE
T ss_pred EEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeE
Confidence 99999876532 22222 333 899999999998877 789999999988 7888889989999999
Q ss_pred eeeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCC--------------CeEEE
Q 018248 140 CDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKG--------------TLIRV 205 (359)
Q Consensus 140 ~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~~i~i 205 (359)
++|+|++.. +++ ++.|+.|++|+...........+...+.+++|+|+++++++++.++ . +++
T Consensus 224 ~~~~~~~~~--l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-i~~ 299 (369)
T 3zwl_B 224 MQFSPDLTY--FIT-SSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFE-ARF 299 (369)
T ss_dssp EEECTTSSE--EEE-EETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CE-EEE
T ss_pred EEECCCCCE--EEE-ecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcce-eEE
Confidence 999998765 554 5579999999987644444344788999999999999999999888 7 999
Q ss_pred EEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 206 FNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
||..+++.+..+.. |...|.+++|+|++++|++++.||.|++|+++.+.
T Consensus 300 ~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 300 YHKIFEEEIGRVQG--HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EETTTCCEEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred EecCCCcchhheec--ccCcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 99999999999987 77899999999999999999999999999998754
No 101
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.9e-32 Score=236.92 Aligned_cols=242 Identities=12% Similarity=0.132 Sum_probs=198.5
Q ss_pred CCCCceEEEEEccC-CCEEEEec-CCceEEEEcCCC--------cceeeeecccCCCCceeEEEEeccCC-EEEEEecCC
Q 018248 4 PDPITIHHLALNQD-HGCFATGT-ETGFRVYLSDPY--------KPIMRRDFDRNPRGGTQLVSMLFRSN-IICLVNSGP 72 (359)
Q Consensus 4 ~h~~~v~~~~~s~~-g~~l~~~~-d~~i~iw~~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~~~~~~ 72 (359)
.|...|++++|+|+ +.+|++++ +|.|++|++... .......+. +|...+..++|++++. .++.++
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~--- 201 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLNGYLLSAS--- 201 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTSTTEEEEEC---
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCCCeEEEEe---
Confidence 47889999999997 67899999 999999999751 122223444 7999999999999887 555555
Q ss_pred CCCCeEEEEECCCccE-------Eeeec-cCcceeEEEEec-ceeEEE---ecCeEEEEEcccc---eeeeeEeccCCCc
Q 018248 73 HQSNKVMIWDDHENRY-------LGELS-FRSEVKNVRLRR-DRIVVV---LNQKVYVYNFTDL---KLVDQIETVVNPT 137 (359)
Q Consensus 73 ~~d~~i~iwd~~~~~~-------~~~~~-~~~~v~~~~~~~-~~~~~~---~d~~i~i~d~~~~---~~~~~~~~~~~~~ 137 (359)
.||.|++|++.++.. ...+. |...|.+++|+| ++.+++ .|+.|++||++++ +.+..+..|...+
T Consensus 202 -~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 202 -DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp -TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred -CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 689999999987322 33443 888999999999 555555 7999999999876 5677778888999
Q ss_pred eeeeeecCCCccEEEecCCCCeeEEEEecCC--eeeEEeecccccccEEEEccCCc-EEEEEeCCCCeEEEEEcCC----
Q 018248 138 GLCDVSQNAGPMVMACPGLLKGQVRVEDYGT--KKSKYITAHASRIASIAMTLDGR-FVATASSKGTLIRVFNTMD---- 210 (359)
Q Consensus 138 ~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~~i~iwd~~~---- 210 (359)
..++|+|++..+ +++ |+.||.|++|+.+. .++..+..|...|.+++|+|+++ +|++++.|+. |++||+..
T Consensus 281 ~~i~~~p~~~~~-l~t-g~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~-i~iwd~~~~~~~ 357 (430)
T 2xyi_A 281 NCLSFNPYSEFI-LAT-GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLSKIGEE 357 (430)
T ss_dssp EEEEECSSCTTE-EEE-EETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-CEEEEGGGTTCC
T ss_pred EEEEeCCCCCCE-EEE-EeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-EEEEeCCCCccc
Confidence 999999988753 333 66799999999875 56788889999999999999995 7999999999 99999987
Q ss_pred ----------CcEEEEeecCCCCcceEEEEecCCCC-EEEEEcCCCcEEEEEccCC
Q 018248 211 ----------GSLLQEMRRGAERAEIYSLAFSSNAQ-WLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 211 ----------~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~ 255 (359)
.+.+..+.. |...|.+++|+|+++ +|++++.||.|+||++...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGG--HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEECCC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCccccccCCcceEEEcCC--CCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 356666655 778999999999999 8999999999999999764
No 102
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-32 Score=240.20 Aligned_cols=288 Identities=10% Similarity=0.063 Sum_probs=207.1
Q ss_pred EEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEec-cCCEEEEEecCCCCCCeEEEEECCC---cc-
Q 018248 13 ALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLF-RSNIICLVNSGPHQSNKVMIWDDHE---NR- 87 (359)
Q Consensus 13 ~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~~d~~i~iwd~~~---~~- 87 (359)
.|+|+++.++++. .|+.+ + .....+..+|.+.|.++++++ +++.++.++ .|+.|++||+.+ +.
T Consensus 34 ~f~~~~~~~~~~~-----~w~~~-g--~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s----~dg~v~vwd~~~~~~~~~ 101 (437)
T 3gre_A 34 EFGPIQEIVRSPN-----MGNLR-G--KLIATLMENEPNSITSSAVSPGETPYLITGS----DQGVIKIWNLKEIIVGEV 101 (437)
T ss_dssp GGCCCCCCCCCCC-----GGGCC-C--CEEEEECTTTTSCEEEEEEECSSSCEEEEEE----TTSEEEEEEHHHHHTTCC
T ss_pred hcCCccccccccc-----ccccc-c--eEEeeeccCCCCceEEEEECCCCCCEEEEec----CCceEEEeECcccccCcc
Confidence 3567777776654 47644 2 233455338999999999999 888888887 789999999876 33
Q ss_pred --EEeeeccCcceeEEEEecceeEEE---ecCeEEEEEcc---cceeeeeEec------------cCCCceeeeeecCCC
Q 018248 88 --YLGELSFRSEVKNVRLRRDRIVVV---LNQKVYVYNFT---DLKLVDQIET------------VVNPTGLCDVSQNAG 147 (359)
Q Consensus 88 --~~~~~~~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~---~~~~~~~~~~------------~~~~~~~~~~~~~~~ 147 (359)
....+.|...|.+++|+|++..++ .|+.|++||+. +++....+.. +...+..+.+.+.++
T Consensus 102 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 181 (437)
T 3gre_A 102 YSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEE 181 (437)
T ss_dssp CSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSS
T ss_pred cceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCC
Confidence 344456899999999999988777 79999999994 4544443332 223333444333344
Q ss_pred ccEEEecCCCCeeEEEEecCC-eeeEEeec--ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCc
Q 018248 148 PMVMACPGLLKGQVRVEDYGT-KKSKYITA--HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERA 224 (359)
Q Consensus 148 ~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~ 224 (359)
..++++ |+.|+.|++|+... +.+..+.. |...|++++|+|++++|++|+.||. |++||+++++.+..+... |..
T Consensus 182 ~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~-~~~ 258 (437)
T 3gre_A 182 KSLLVA-LTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGI-IDIWDIRFNVLIRSWSFG-DHA 258 (437)
T ss_dssp CEEEEE-EETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSC-EEEEETTTTEEEEEEBCT-TCE
T ss_pred CCEEEE-EeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCe-EEEEEcCCccEEEEEecC-CCC
Confidence 445666 66799999998754 66777777 8999999999999999999999999 999999999999888632 567
Q ss_pred ceEEEEec----CCCCEEEEEcCCCcEEEEEccCCCCCCCC----CccccCCCCCccCCCCCceeeeeEeeeecceEEec
Q 018248 225 EIYSLAFS----SNAQWLAASSDKGTVHVFGLKVDSGSPGT----SKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSS 296 (359)
Q Consensus 225 ~i~~~~~s----~~~~~l~~~~~dg~i~iw~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (359)
.|.+++|+ |++++|++++.||.|++||+++++..... .......+.+.... + .
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------l----~- 319 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKG--------------L----E- 319 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSS--------------G----G-
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccc--------------c----c-
Confidence 99999554 57889999999999999999877632100 00011111111000 0 0
Q ss_pred ccceeEEee--cCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 297 KWSMAQFRL--PENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 297 ~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
. ..+.. +.+.|.+++|+ ++++|++|+.||.|++|++..
T Consensus 320 ~---~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 320 E---LNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp G---CCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTC
T ss_pred c---ceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCC
Confidence 0 00112 45678999999 779999999999999999876
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.4e-32 Score=232.42 Aligned_cols=239 Identities=18% Similarity=0.219 Sum_probs=191.4
Q ss_pred CCCCceEEEEEccC---CCEEEEec-CCceEEEEcCCCc-ceeeeecccCCCCceeEEEE------eccCCEEEEEecCC
Q 018248 4 PDPITIHHLALNQD---HGCFATGT-ETGFRVYLSDPYK-PIMRRDFDRNPRGGTQLVSM------LFRSNIICLVNSGP 72 (359)
Q Consensus 4 ~h~~~v~~~~~s~~---g~~l~~~~-d~~i~iw~~~~~~-~~~~~~~~~~h~~~v~~~~~------~~~~~~~~~~~~~~ 72 (359)
.|..+|.+++|+|+ +++|++|+ |+.|++|++.+++ .. ..+. +|...+..+.+ +++++.++.++
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~--- 136 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPV--YSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGS--- 136 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCS--EEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEE---
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccE--EEEE-ecccceEEEeeccccccCCCccEEEEEe---
Confidence 47889999999999 69999999 9999999999776 33 3344 79999999965 45666777666
Q ss_pred CCCCeEEEEECCCcc-EEeeec-cC----cceeEEE----EecceeEEE---ecCeEEEEEcccceeeeeEeccCCCcee
Q 018248 73 HQSNKVMIWDDHENR-YLGELS-FR----SEVKNVR----LRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGL 139 (359)
Q Consensus 73 ~~d~~i~iwd~~~~~-~~~~~~-~~----~~v~~~~----~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 139 (359)
.|+.|++||+.+++ .+..+. +. ..+.++. |+|++.+++ .|+.|++||+++++.... ..+...+..
T Consensus 137 -~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~ 214 (357)
T 3i2n_A 137 -RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCS 214 (357)
T ss_dssp -TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEE
T ss_pred -CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEE
Confidence 78999999999886 666665 33 3788888 678888887 689999999998887544 556788999
Q ss_pred eeeec---CCCccEEEecCCCCeeEEEEecCCe-eeE-----EeecccccccEEEEccCCc-EEEEEeCCCCeEEEEEcC
Q 018248 140 CDVSQ---NAGPMVMACPGLLKGQVRVEDYGTK-KSK-----YITAHASRIASIAMTLDGR-FVATASSKGTLIRVFNTM 209 (359)
Q Consensus 140 ~~~~~---~~~~~~l~~~g~~d~~v~~~~~~~~-~~~-----~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~~i~iwd~~ 209 (359)
++|+| +++. +++ ++.||.|++|+.+.. ... .+.+|...|.+++|+|+++ +|++++.||. |++||++
T Consensus 215 ~~~~~~~~~~~~--l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~iwd~~ 290 (357)
T 3i2n_A 215 LEFDRKDISMNK--LVA-TSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG-LHLWKYE 290 (357)
T ss_dssp EEESCSSSSCCE--EEE-EESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE-EEEEEEE
T ss_pred EEcCCCCCCCCE--EEE-ECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc-EEEeecC
Confidence 99999 5554 554 557999999887642 222 3348999999999999999 8999999999 9999997
Q ss_pred CC-------------------cEEEEeecCCCCcceEEEEecCCCCEEE-EEcCCCcEEEEEccCCC
Q 018248 210 DG-------------------SLLQEMRRGAERAEIYSLAFSSNAQWLA-ASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 210 ~~-------------------~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~ 256 (359)
++ +.+..+.. |...|.+++|+|++++|+ +++.||.|+|||+.+.+
T Consensus 291 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 291 YPIQRSKKDSEGIEMGVAGSVSLLQNVTL--STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CCSCC--CCTTSCCCCCCCEEEEEEEEEC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCcccccccCCCCccccccccceeecccc--CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 54 35566665 778999999999999998 89999999999998754
No 104
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-32 Score=242.28 Aligned_cols=240 Identities=11% Similarity=0.034 Sum_probs=186.4
Q ss_pred CCCceEEEEEccC------CCEEEEec-CCceEEEEcCCCcce---------eeeecccCCCCceeEEEEeccCCEEEEE
Q 018248 5 DPITIHHLALNQD------HGCFATGT-ETGFRVYLSDPYKPI---------MRRDFDRNPRGGTQLVSMLFRSNIICLV 68 (359)
Q Consensus 5 h~~~v~~~~~s~~------g~~l~~~~-d~~i~iw~~~~~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 68 (359)
|.+.|.+++|+|+ +.+||+++ |++|+||++..+... ....+. +|...+.+++|+++ +.++.+
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~-~h~~~v~sv~~s~~-~~lasg 283 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS-LADSLITTFDFLSP-TTVVCG 283 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC-CTTTCEEEEEESSS-SEEEEE
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE-cCCCCEEEEEecCC-CeEEEE
Confidence 4678999999997 57999999 999999999865321 012344 78999999999864 455555
Q ss_pred ecCCCCCCeEEEEECCCcc-EEeeec-cCcceeEE--EEecce-eEEE---ecCeEEEEEcccceeeeeEeccCC--Cce
Q 018248 69 NSGPHQSNKVMIWDDHENR-YLGELS-FRSEVKNV--RLRRDR-IVVV---LNQKVYVYNFTDLKLVDQIETVVN--PTG 138 (359)
Q Consensus 69 ~~~~~~d~~i~iwd~~~~~-~~~~~~-~~~~v~~~--~~~~~~-~~~~---~d~~i~i~d~~~~~~~~~~~~~~~--~~~ 138 (359)
+ .||+|++||+.+++ +...+. |...|.++ .|+|++ .+++ .|++|++||+++++.+..+..+.. .+.
T Consensus 284 s----~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 284 F----KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp E----TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred e----CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 5 68999999998764 444455 89999999 568887 6666 899999999998887777766543 467
Q ss_pred eeeeecCCCccEEEecCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCC------
Q 018248 139 LCDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDG------ 211 (359)
Q Consensus 139 ~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~------ 211 (359)
.++|+|++.. +++ ++.|+.|++|+.+. ..+..+.+|...|++++|+|+|++|++|+.|+. |++||+..+
T Consensus 360 ~v~fsp~~~~--l~s-~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt-v~lwd~~~~~~~~~~ 435 (524)
T 2j04_B 360 PVVYCPQIYS--YIY-SDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGS-LIITNAARRLLHGIK 435 (524)
T ss_dssp CEEEETTTTE--EEE-ECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTE-EECCBSCSSTTTCC-
T ss_pred ceEeCCCcCe--EEE-eCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCE-EEEEechHhhccccc
Confidence 8999998765 555 55789999998664 556778899999999999999999999999999 999985321
Q ss_pred --------------------------------------cEEEEeecCCCCcceEEEEecCCCC---EEEEEcCCCcEEEE
Q 018248 212 --------------------------------------SLLQEMRRGAERAEIYSLAFSSNAQ---WLAASSDKGTVHVF 250 (359)
Q Consensus 212 --------------------------------------~~~~~~~~~~~~~~i~~~~~s~~~~---~l~~~~~dg~i~iw 250 (359)
..+..+. .|...|.+++|+|+++ +|++|+.+|.|+||
T Consensus 436 ~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~--gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw 513 (524)
T 2j04_B 436 NSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKID--AHGINITCTKWNETSAGGKCYAFSNSAGLLTLE 513 (524)
T ss_dssp -----CCCCEEEECBCCSSSCEEEECCCCCCCC---------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEE
T ss_pred cCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeec--CCCceEEEEECCCCCCccHHHHhhccCceEEEE
Confidence 0011121 1567899999999964 99999999999999
Q ss_pred EccCCC
Q 018248 251 GLKVDS 256 (359)
Q Consensus 251 ~~~~~~ 256 (359)
++....
T Consensus 514 ~l~~~~ 519 (524)
T 2j04_B 514 YLSLEH 519 (524)
T ss_dssp ECSCC-
T ss_pred Eccccc
Confidence 997643
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-31 Score=235.01 Aligned_cols=245 Identities=8% Similarity=0.150 Sum_probs=187.3
Q ss_pred CCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc-----------EEeeec-cC------------cceeEEEEe
Q 018248 49 PRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR-----------YLGELS-FR------------SEVKNVRLR 104 (359)
Q Consensus 49 h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~-----------~~~~~~-~~------------~~v~~~~~~ 104 (359)
|.+.|.+++|+++++.++.++ .|+.|++||+.+++ ....+. |. ..|.+++|+
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~----~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGD----KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEE----TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred ccCcEEEEEECCCCCEEEEEc----CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc
Confidence 578999999999999998887 78999999998876 466666 76 789999999
Q ss_pred cce--eEEE---ecCeEEEEEcccceee---------------------------------------ee-EeccCCCcee
Q 018248 105 RDR--IVVV---LNQKVYVYNFTDLKLV---------------------------------------DQ-IETVVNPTGL 139 (359)
Q Consensus 105 ~~~--~~~~---~d~~i~i~d~~~~~~~---------------------------------------~~-~~~~~~~~~~ 139 (359)
|++ ..++ .|+.|++||+.+++.. .. ...|...+..
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 997 4444 8999999999764432 12 2468888999
Q ss_pred eeeecCCCccEEEecCCCCeeEEEEecCC-e-eeE-------EeecccccccEEEEccCC-cEEEEEeCCCCeEEEEEcC
Q 018248 140 CDVSQNAGPMVMACPGLLKGQVRVEDYGT-K-KSK-------YITAHASRIASIAMTLDG-RFVATASSKGTLIRVFNTM 209 (359)
Q Consensus 140 ~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~-~~~-------~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~~i~iwd~~ 209 (359)
++|+|+++. +++ | .|+.|++|+... . ... .+..|...|.+++|+|++ ++|++++.||. |++||++
T Consensus 183 ~~~~~~~~~--l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-i~iwd~~ 257 (447)
T 3dw8_B 183 ISINSDYET--YLS-A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT-IRLCDMR 257 (447)
T ss_dssp EEECTTSSE--EEE-E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC-EEEEETT
T ss_pred EEEcCCCCE--EEE-e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe-EEEEECc
Confidence 999998764 666 5 699999999883 2 333 255899999999999998 99999999999 9999999
Q ss_pred CCcE----EEEeecCCCCc------------ceEEEEecCCCCEEEEEcCCCcEEEEEccC-CCCCCCCCccccCCCCCc
Q 018248 210 DGSL----LQEMRRGAERA------------EIYSLAFSSNAQWLAASSDKGTVHVFGLKV-DSGSPGTSKLHSASEPNL 272 (359)
Q Consensus 210 ~~~~----~~~~~~~~~~~------------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~~~~~~~~~ 272 (359)
+++. +..+.. |.. .|.+++|+|++++|++++. +.|++||+++ ++....
T Consensus 258 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~------------ 322 (447)
T 3dw8_B 258 ASALCDRHSKLFEE--PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVET------------ 322 (447)
T ss_dssp TCSSSCTTCEEECC--C-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCC------------
T ss_pred CCccccceeeEecc--CCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccce------------
Confidence 9886 677765 433 8999999999999999998 9999999987 432210
Q ss_pred cCCCCCceeeeeEeeeecceEEecccceeE-E--eecCC---cEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 273 SSKNSSAISSFRFIRGVLPKYFSSKWSMAQ-F--RLPEN---VQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~---~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
+..+..... + ..... .+..++|+|++++|++|+.||.|++|++..
T Consensus 323 ---------------------~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 323 ---------------------YQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp ---------------------EESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred ---------------------eeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 000000000 0 00000 123489999999999999999999999876
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-32 Score=230.49 Aligned_cols=261 Identities=8% Similarity=0.046 Sum_probs=194.1
Q ss_pred EccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC--------
Q 018248 14 LNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH-------- 84 (359)
Q Consensus 14 ~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~-------- 84 (359)
+.+++.+|++|+ |+.|++||+++++...... ...+..+.+.+. ++.++ .|++|++|+..
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-----~~~v~~~~~~~~---~~s~s----~D~~i~~w~~~~~~~~~~~ 111 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-----TPNPRTGGEHPA---IISRG----PCNRLLLLYPGNQITILDS 111 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-----EECCCTTCCCCS---EEEEC----STTEEEEEETTTEEEEEET
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-----cCCceeeeeCCc---eEEec----CCCeEEEEEccCceEEeec
Confidence 446788999999 9999999999876654332 344555555544 44333 68999999654
Q ss_pred -CccEEeeec--cCcceeEEEEec--ceeEEE---ecCeEEEEEcccceeeeeEec-cCCCceeeeeecCCCccEEEecC
Q 018248 85 -ENRYLGELS--FRSEVKNVRLRR--DRIVVV---LNQKVYVYNFTDLKLVDQIET-VVNPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 85 -~~~~~~~~~--~~~~v~~~~~~~--~~~~~~---~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g 155 (359)
+++.+..+. |...|.+++|+| ++.+++ .|+.|++||+++++....... +...+.+++|+|++.. +++ |
T Consensus 112 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~--las-g 188 (343)
T 3lrv_A 112 KTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLL--LAL-Y 188 (343)
T ss_dssp TTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCE--EEE-E
T ss_pred CCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCE--EEE-E
Confidence 555555554 668899999999 888887 799999999999888666533 4456888999998764 665 6
Q ss_pred CCCeeEEEEecCCe-ee-EEeec-ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecC-CCCcce--EEE
Q 018248 156 LLKGQVRVEDYGTK-KS-KYITA-HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRG-AERAEI--YSL 229 (359)
Q Consensus 156 ~~d~~v~~~~~~~~-~~-~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~-~~~~~i--~~~ 229 (359)
+.||.|++|+.+.. .. ..+.. |..+|.+++|+|++.+|++++.+ . |++||+++++.+..+... .+...+ .++
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-T-VVCFDLRKDVGTLAYPTYTIPEFKTGTVTY 266 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-B-EEEEETTSSTTCBSSCCCBC-----CCEEE
T ss_pred cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-e-EEEEEcCCCCcceeecccccccccccceEE
Confidence 78999999988753 34 57777 99999999999999999999954 8 999999998766544320 011223 469
Q ss_pred EecCCCCEEEEEcC-CCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCC
Q 018248 230 AFSSNAQWLAASSD-KGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPEN 308 (359)
Q Consensus 230 ~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (359)
+|+|+|++|++++. |+.|+||++...... +.. .
T Consensus 267 ~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~-----------------------------------~~~-----------~ 300 (343)
T 3lrv_A 267 DIDDSGKNMIAYSNESNSLTIYKFDKKTKN-----------------------------------WTK-----------D 300 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCS-----------------------------------EEE-----------E
T ss_pred EECCCCCEEEEecCCCCcEEEEEEcccccc-----------------------------------eEe-----------c
Confidence 99999999999988 999999999876521 110 2
Q ss_pred cEEEeeecc---cCCEEEEEecCCeEEEEEeC
Q 018248 309 VQYLVGFGR---QNNTIVIVGLDGSYYKCEFD 337 (359)
Q Consensus 309 ~v~~~~~s~---~~~~l~~~~~dg~i~v~~~~ 337 (359)
.+..++|++ +.+.|++++.||.+.++-..
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 301 EESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred CceeEecCccccccceeEEEecCCceEEEEec
Confidence 456788988 88999999999999988544
No 107
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-31 Score=219.82 Aligned_cols=234 Identities=12% Similarity=0.164 Sum_probs=195.5
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcc-eeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKP-IMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
.|...|.+++|+|++++|++|+ |+.|++|++..... .....+. +|...+..+++ +++.++.++ .|+.|++|
T Consensus 57 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~----~d~~i~~~ 129 (313)
T 3odt_A 57 TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLSF--QDGVVISGS----WDKTAKVW 129 (313)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEE--ETTEEEEEE----TTSEEEEE
T ss_pred cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh-hcccCEEEEEe--cCCEEEEEe----CCCCEEEE
Confidence 4788999999999999999999 99999999875432 2223343 78888888777 677777777 78999999
Q ss_pred ECCCccEEeeec-cCcceeEEEEec-ceeEEE---ecCeEEEEEcccceeeeeEec-cCCCceeeeeecCCCccEEEecC
Q 018248 82 DDHENRYLGELS-FRSEVKNVRLRR-DRIVVV---LNQKVYVYNFTDLKLVDQIET-VVNPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 82 d~~~~~~~~~~~-~~~~v~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g 155 (359)
| .++.+..+. |...+.++.+.| ++..++ .|+.|++|| ..+....+.. +...+..++++|++. +++ +
T Consensus 130 d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~-~ 201 (313)
T 3odt_A 130 K--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH---FIS-C 201 (313)
T ss_dssp E--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE---EEE-E
T ss_pred c--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe---EEE-c
Confidence 9 666777776 889999999988 666666 789999999 4566666666 788899999999876 444 5
Q ss_pred CCCeeEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCC
Q 018248 156 LLKGQVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSN 234 (359)
Q Consensus 156 ~~d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 234 (359)
+.|+.|++|+.+ ++.+..+..|...|.+++|+|++ .|++++.||. |++||+++++.+..+.. |...|.+++|+|+
T Consensus 202 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~-v~iwd~~~~~~~~~~~~--~~~~i~~~~~~~~ 277 (313)
T 3odt_A 202 SNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRT-VRIWSKENGSLKQVITL--PAISIWSVDCMSN 277 (313)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSE-EEEECTTTCCEEEEEEC--SSSCEEEEEECTT
T ss_pred cCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCE-EEEEECCCCceeEEEec--cCceEEEEEEccC
Confidence 579999998876 56778888999999999999999 5889999999 99999999999999987 6679999999999
Q ss_pred CCEEEEEcCCCcEEEEEccCCCC
Q 018248 235 AQWLAASSDKGTVHVFGLKVDSG 257 (359)
Q Consensus 235 ~~~l~~~~~dg~i~iw~~~~~~~ 257 (359)
++ +++++.||.|++|++++++.
T Consensus 278 ~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 278 GD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp SC-EEEEETTSCEEEEESCGGGC
T ss_pred CC-EEEEeCCCcEEEEeCCCCce
Confidence 98 55688999999999998763
No 108
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-31 Score=230.99 Aligned_cols=242 Identities=12% Similarity=0.112 Sum_probs=198.2
Q ss_pred CCCCceEEEEEcc-CCCEEEEec-CCceEEEEcCCCcc-----eeeeecccCCCCceeEEEEeccC-CEEEEEecCCCCC
Q 018248 4 PDPITIHHLALNQ-DHGCFATGT-ETGFRVYLSDPYKP-----IMRRDFDRNPRGGTQLVSMLFRS-NIICLVNSGPHQS 75 (359)
Q Consensus 4 ~h~~~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~~~~d 75 (359)
.|...|.+++|+| ++++|++|+ |+.|++|++.++.. .....+. +|...|..++|++++ +.++.++ .|
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~----~d 153 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAG----CD 153 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEE----TT
T ss_pred cCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEc----CC
Confidence 5899999999999 999999999 99999999987632 1223444 899999999999997 5666666 68
Q ss_pred CeEEEEECCCccEEeee--c-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeE-eccCCC-ceeeeeecCCC
Q 018248 76 NKVMIWDDHENRYLGEL--S-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQI-ETVVNP-TGLCDVSQNAG 147 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~--~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~-~~~~~~-~~~~~~~~~~~ 147 (359)
+.|++||+.+++.+..+ . |...|.+++|+|++.+++ .|+.|++||+++++.+..+ ..+... +..+.|+|++.
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc
Confidence 99999999999999988 5 889999999999998777 7999999999999998888 566654 67888998765
Q ss_pred ccEEEecC---CCCeeEEEEecCCee--eEEe-ecccccccEEEEccCCcEEEE-EeCCCCeEEEEEcCCCcE-EEEeec
Q 018248 148 PMVMACPG---LLKGQVRVEDYGTKK--SKYI-TAHASRIASIAMTLDGRFVAT-ASSKGTLIRVFNTMDGSL-LQEMRR 219 (359)
Q Consensus 148 ~~~l~~~g---~~d~~v~~~~~~~~~--~~~~-~~~~~~i~~~~~s~~~~~l~~-~~~dg~~i~iwd~~~~~~-~~~~~~ 219 (359)
++++ | +.|+.|++|+..... .... ..|...+.+++|+|++++|++ ++.|+. |++||+.+++. +..+..
T Consensus 234 --~l~~-g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~-i~i~d~~~~~~~~~~l~~ 309 (402)
T 2aq5_A 234 --ILTT-GFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS-IRYFEITSEAPFLHYLSM 309 (402)
T ss_dssp --EEEE-EECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSC-EEEEEECSSTTCEEEEEE
T ss_pred --EEEE-eccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCe-EEEEEecCCCcceEeecc
Confidence 3554 4 679999999987632 3333 357788999999999999865 557999 99999998874 555554
Q ss_pred CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 220 GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 220 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
..+...|.+++|+|++.++++ .++.+++|++.++.
T Consensus 310 ~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 310 FSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp ECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred cccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 335689999999999998874 56689999998764
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-32 Score=252.08 Aligned_cols=246 Identities=11% Similarity=0.152 Sum_probs=202.7
Q ss_pred CCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC--CccEEeeec-cCcceeEEEEecc--eeEEE---ecCeEEEE
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH--ENRYLGELS-FRSEVKNVRLRRD--RIVVV---LNQKVYVY 119 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~--~~~~~~~~~-~~~~v~~~~~~~~--~~~~~---~d~~i~i~ 119 (359)
+|.+.|.+++++++++.++.++ .||.|++||+. +++.+..+. |...|.+++|+|+ +.+++ .||.|++|
T Consensus 7 gH~~~V~~l~~s~dg~~latg~----~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCS----SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEE----TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred cCcceeEEEEECCCCCeEEEEE----CCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 8999999999999999888877 78999999987 556777777 9999999999987 77776 89999999
Q ss_pred Ecccce--eeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCe---eeEEeecccccccEEEEcc------
Q 018248 120 NFTDLK--LVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK---KSKYITAHASRIASIAMTL------ 188 (359)
Q Consensus 120 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~---~~~~~~~~~~~i~~~~~s~------ 188 (359)
|+.+++ .+..+..|...+..++|+|+.....+++ |+.||.|++|+.... ....+..|...|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~s-gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEE-EeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 998886 6777778899999999999832233555 567999999998764 4556788999999999999
Q ss_pred -------CCcEEEEEeCCCCeEEEEEcCCC----cEEEEeecCCCCcceEEEEecCC---CCEEEEEcCCCcEEEEEccC
Q 018248 189 -------DGRFVATASSKGTLIRVFNTMDG----SLLQEMRRGAERAEIYSLAFSSN---AQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 189 -------~~~~l~~~~~dg~~i~iwd~~~~----~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~iw~~~~ 254 (359)
++.+|++|+.||. |++||++++ .....+.. |...|++++|+|+ +++|++++.||.|++||+.+
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~-I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp -----CGGGCCEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred cccccCCCCCEEEEEECCCe-EEEEeccCCcccceeeeeecC--CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 5899999999999 999999887 44555655 7789999999999 89999999999999999998
Q ss_pred CCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEE
Q 018248 255 DSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKC 334 (359)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~ 334 (359)
+..... . .......+.+.+.+++|+|++++|++++.||.|++|
T Consensus 239 ~~~~~~------------------------------~-------~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 239 EQGPWK------------------------------K-------TLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (753)
T ss_dssp SSSCCB------------------------------C-------CBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECC
T ss_pred CCCcce------------------------------e-------EEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 652110 0 000011234678899999999999999999999999
Q ss_pred EeCC
Q 018248 335 EFDP 338 (359)
Q Consensus 335 ~~~~ 338 (359)
++..
T Consensus 282 d~~~ 285 (753)
T 3jro_A 282 KENL 285 (753)
T ss_dssp BCCS
T ss_pred ecCC
Confidence 9875
No 110
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.2e-30 Score=220.44 Aligned_cols=262 Identities=13% Similarity=0.085 Sum_probs=206.0
Q ss_pred CEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcc
Q 018248 19 GCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSE 97 (359)
Q Consensus 19 ~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 97 (359)
.++++++ |+.|++||+++++... .+. +| ..+..++++++++.+++++. .|+.|++||+.+++.+..+.+...
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~--~~~-~~-~~~~~~~~s~dg~~l~~~~~---~d~~i~v~d~~~~~~~~~~~~~~~ 75 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTA--TIP-VG-SNPMGAVISPDGTKVYVANA---HSNDVSIIDTATNNVIATVPAGSS 75 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEE--EEE-CS-SSEEEEEECTTSSEEEEEEG---GGTEEEEEETTTTEEEEEEECSSS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEE--Eee-cC-CCcceEEECCCCCEEEEECC---CCCeEEEEECCCCeEEEEEECCCC
Confidence 3567777 9999999999876553 332 33 45788999999988765553 479999999999999999986679
Q ss_pred eeEEEEecceeEEE----ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCC-eeeE
Q 018248 98 VKNVRLRRDRIVVV----LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSK 172 (359)
Q Consensus 98 v~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~ 172 (359)
+.+++|+|++..++ .++.|++||+.+++.+..+..+. .+..++|+|+++.++++ +..++.|++|+... +...
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~--~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVT--NNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEE--ETTTTEEEEEETTTTEEEE
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEEE--eCCCCEEEEEECCCCcEEE
Confidence 99999999998665 46999999999999888877544 56788999988763333 55789999998765 4555
Q ss_pred EeecccccccEEEEccCCcEE-EEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEc---CCCcEE
Q 018248 173 YITAHASRIASIAMTLDGRFV-ATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASS---DKGTVH 248 (359)
Q Consensus 173 ~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~ 248 (359)
.+..+ ..+.+++|+|++++| ++++.++. |++||+++++.+..+. +...+.+++|+|++++|++++ .++.|+
T Consensus 153 ~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~ 227 (391)
T 1l0q_A 153 TVSVG-RSPKGIAVTPDGTKVYVANFDSMS-ISVIDTVTNSVIDTVK---VEAAPSGIAVNPEGTKAYVTNVDKYFNTVS 227 (391)
T ss_dssp EEECC-SSEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEEE---CSSEEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred EEecC-CCcceEEECCCCCEEEEEeCCCCE-EEEEECCCCeEEEEEe---cCCCccceEECCCCCEEEEEecCcCCCcEE
Confidence 55544 556999999999987 56778888 9999999999888776 346889999999999998887 689999
Q ss_pred EEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEE-EEEec
Q 018248 249 VFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTI-VIVGL 327 (359)
Q Consensus 249 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~ 327 (359)
+||+.+++.. . .+..+ ..+..++|+|++++| ++++.
T Consensus 228 ~~d~~~~~~~---------------------------------~---------~~~~~-~~~~~~~~s~dg~~l~~s~~~ 264 (391)
T 1l0q_A 228 MIDTGTNKIT---------------------------------A---------RIPVG-PDPAGIAVTPDGKKVYVALSF 264 (391)
T ss_dssp EEETTTTEEE---------------------------------E---------EEECC-SSEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCeEE---------------------------------E---------EEecC-CCccEEEEccCCCEEEEEcCC
Confidence 9999876511 0 01111 245789999999988 56677
Q ss_pred CCeEEEEEeCC
Q 018248 328 DGSYYKCEFDP 338 (359)
Q Consensus 328 dg~i~v~~~~~ 338 (359)
||.|++|++..
T Consensus 265 d~~v~v~d~~~ 275 (391)
T 1l0q_A 265 XNTVSVIDTAT 275 (391)
T ss_dssp TTEEEEEETTT
T ss_pred CCEEEEEECCC
Confidence 99999998875
No 111
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.2e-31 Score=234.17 Aligned_cols=201 Identities=12% Similarity=0.104 Sum_probs=161.5
Q ss_pred CCCCceeEEEEecc-CCEEEEEecCCCCCCeEEEEECCCccEEee--ec-cCcceeEEEEec-ceeEEE---ecCeEEEE
Q 018248 48 NPRGGTQLVSMLFR-SNIICLVNSGPHQSNKVMIWDDHENRYLGE--LS-FRSEVKNVRLRR-DRIVVV---LNQKVYVY 119 (359)
Q Consensus 48 ~h~~~v~~~~~~~~-~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~--~~-~~~~v~~~~~~~-~~~~~~---~d~~i~i~ 119 (359)
+|...|.+++|+|. ++.++.++ .||.|+|||+.+++.... +. |...|.+++|+| ++.+++ .|++|++|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs----~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGS----KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEE----TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEe----CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 57888999999985 45666666 789999999987754433 33 899999999998 566666 89999999
Q ss_pred EcccceeeeeEeccC--CCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCc-EEEEE
Q 018248 120 NFTDLKLVDQIETVV--NPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGR-FVATA 196 (359)
Q Consensus 120 d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~ 196 (359)
|++++........+. ..+..+++++++.. +++ |+.||.|++|+.+++.+..+.+|...|.+++|+|++. +|+++
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~-g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRM--VVT-GDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTE--EEE-ECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCE--EEE-EeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEe
Confidence 997655433333333 33456778887754 665 7789999999999988888999999999999999886 78899
Q ss_pred eCCCCeEEEEEcCCCcEEEEee-cCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 197 SSKGTLIRVFNTMDGSLLQEMR-RGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 197 ~~dg~~i~iwd~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
+.|+. |++||+++.+....+. ...|...|++++|+|+|++|++++.||.|+|||+.++.
T Consensus 270 s~d~~-v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 270 SVDQT-VKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp ETTSB-CCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred cCcce-eeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 99999 9999998876543332 12377899999999999999999999999999998876
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=6e-31 Score=226.57 Aligned_cols=259 Identities=10% Similarity=0.039 Sum_probs=165.5
Q ss_pred ceEEEEEccCCCEEEEec-CCceEEEEcCCCcceee---eecccCCCCceeEEEEec--------cCCEEEEEecCCCCC
Q 018248 8 TIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMR---RDFDRNPRGGTQLVSMLF--------RSNIICLVNSGPHQS 75 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~---~~~~~~h~~~v~~~~~~~--------~~~~~~~~~~~~~~d 75 (359)
.+....+++++.+|++|+ |++|+|||++.++.... ..+. ||.+.|..++|+| +++.++.++ .|
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~-gH~~~v~~v~~~p~~~~~~~~d~~~las~s----~D 165 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKS-GHHNFVNDIDIADVYSADNRLAEQVIASVG----DD 165 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTT-SCSSCEEEEEEEEEECTTCSEEEEEEEEEE----TT
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccC-CCCCceEEEEEccccccccCCCCCEEEEEE----CC
Confidence 334444556677899999 99999999987654332 2344 9999999999987 455666666 79
Q ss_pred CeEEEEECCCccEEeeec-cCcceeEEEEeccee-EEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccE
Q 018248 76 NKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRI-VVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMV 150 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (359)
++|++||+.++..+..+. |...+.+++|+|++. +++ .|++|++||+++++.......+........+++....
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~-- 243 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP-- 243 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG--
T ss_pred CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc--
Confidence 999999998877665554 899999999999874 455 8999999999888766555433322222222221111
Q ss_pred EEecCCCCeeEEEEecCCeeeEEeecccccccEEEEc-cCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEE
Q 018248 151 MACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMT-LDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSL 229 (359)
Q Consensus 151 l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~ 229 (359)
........+|...+.++.|+ |+++.|++++.|+. +++||+..++....+.. +...+..+
T Consensus 244 -----------------~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~-i~vwd~~~~~~~~~l~~--~~~~~~~~ 303 (393)
T 4gq1_A 244 -----------------LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGA-WLRWNLFANNDYNEISD--STMKLGPK 303 (393)
T ss_dssp -----------------GC------CCSSSCSEEEEETTTTCEEEEECTTSE-EEEEEC---------------------
T ss_pred -----------------ceeeeecccccccceeeeeecCCCCEEEEEeCCCC-EEEEECccCCCCceEee--ecCccccE
Confidence 01112234688899999987 89999999999999 99999988776655543 22233333
Q ss_pred E------------------ecC--CCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeee
Q 018248 230 A------------------FSS--NAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGV 289 (359)
Q Consensus 230 ~------------------~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (359)
. |+| ++.++++|+.||.|++||+.+++...
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~------------------------------ 353 (393)
T 4gq1_A 304 NLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS------------------------------ 353 (393)
T ss_dssp CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE------------------------------
T ss_pred EEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE------------------------------
Confidence 2 332 34567888999999999999876320
Q ss_pred cceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEe
Q 018248 290 LPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~ 336 (359)
....+...|.+++|+|||++||+++.+| +.+|++
T Consensus 354 ------------~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 354 ------------IPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp ------------EEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred ------------EecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 1223456899999999999999998877 555555
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.2e-30 Score=220.70 Aligned_cols=252 Identities=10% Similarity=0.061 Sum_probs=192.1
Q ss_pred cCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc----EEeeeccCcceeEEEEeccee-EEE---ecCeEEE
Q 018248 47 RNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR----YLGELSFRSEVKNVRLRRDRI-VVV---LNQKVYV 118 (359)
Q Consensus 47 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~----~~~~~~~~~~v~~~~~~~~~~-~~~---~d~~i~i 118 (359)
.+|.+.|.+++|+++++.+++++ .|+.|++|++.+++ ......|...|.+++|+|++. +++ .|+.|++
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~----~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITS----WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEE----TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEc----CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 37999999999999999888887 68999999998877 544455999999999999998 666 7999999
Q ss_pred EEc-ccceeeeeEec--cCCCceeeeeecCCCccEEEecCCCCeeEEEEecCC---------ee-eEEeecccccccEEE
Q 018248 119 YNF-TDLKLVDQIET--VVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT---------KK-SKYITAHASRIASIA 185 (359)
Q Consensus 119 ~d~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~---------~~-~~~~~~~~~~i~~~~ 185 (359)
||+ .+++. ..+.. |...+..++|+| ++. +++ ++.|+.|++|+... .. +..+. |...+.+++
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~--l~s-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 157 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDK--LIA-ASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMD 157 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTE--EEE-EETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEE
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCE--EEE-EcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEE
Confidence 999 77755 66677 888999999999 543 554 55799999998764 32 33344 888999999
Q ss_pred EccCCcEEEEEeCCCCeEEEEEcCC-CcEEEEeecCCCCcceEEEEecC-CCCEEEEEcCCCcEEEEEccCCCCCCCCCc
Q 018248 186 MTLDGRFVATASSKGTLIRVFNTMD-GSLLQEMRRGAERAEIYSLAFSS-NAQWLAASSDKGTVHVFGLKVDSGSPGTSK 263 (359)
Q Consensus 186 ~s~~~~~l~~~~~dg~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 263 (359)
|+|++ +++++.++. |++||+++ +..........+...+.+++|+| ++++|++++.||.|++|+++.......
T Consensus 158 ~~~~~--l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~--- 231 (342)
T 1yfq_A 158 TNSSR--LIVGMNNSQ-VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN--- 231 (342)
T ss_dssp ECSSE--EEEEESTTE-EEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTT---
T ss_pred ecCCc--EEEEeCCCe-EEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccc---
Confidence 99988 889999999 99999988 55322222222677999999999 999999999999999999987610000
Q ss_pred cccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 264 LHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
.. ....+...........+...|.+++|+|++++|++++.||.|++|++..
T Consensus 232 -------------~~-----------~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 232 -------------SS-----------KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp -------------CT-----------TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred -------------cc-----------cceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 00 0000111100000001234889999999999999999999999999875
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=1.7e-28 Score=211.47 Aligned_cols=238 Identities=13% Similarity=0.071 Sum_probs=194.8
Q ss_pred CCCceEEEEEccCCCEE-EEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 5 DPITIHHLALNQDHGCF-ATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l-~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
+...+.+++|+|+|+++ ++++ |+.|++||+.+++....... ...+..++++++++.+++++. .++.|++||
T Consensus 30 ~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~----~~~v~~~~~spdg~~l~~~~~---~~~~v~v~d 102 (391)
T 1l0q_A 30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA----GSSPQGVAVSPDGKQVYVTNM---ASSTLSVID 102 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC----SSSEEEEEECTTSSEEEEEET---TTTEEEEEE
T ss_pred cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC----CCCccceEECCCCCEEEEEEC---CCCEEEEEE
Confidence 34568999999999987 6666 99999999988766543332 348899999999988876653 469999999
Q ss_pred CCCccEEeeeccCcceeEEEEecceeEEE----ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCC
Q 018248 83 DHENRYLGELSFRSEVKNVRLRRDRIVVV----LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLK 158 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 158 (359)
+.+++.+..+.+...+.+++|+|+++.++ .++.|++||+.+++.+..+..+. .+..++|+|+++.++++ +..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~--~~~~ 179 (391)
T 1l0q_A 103 TTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVA--NFDS 179 (391)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEE--ETTT
T ss_pred CCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEE--eCCC
Confidence 99999998888777899999999998663 68999999999999888887654 45788999988763333 5578
Q ss_pred eeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEe---CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCC
Q 018248 159 GQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATAS---SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNA 235 (359)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 235 (359)
+.|++|+...........+...+.+++|+|++++|++++ .++. |++||+.+++.+..+.. + ..+.+++|+|++
T Consensus 180 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-v~~~d~~~~~~~~~~~~--~-~~~~~~~~s~dg 255 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT-VSMIDTGTNKITARIPV--G-PDPAGIAVTPDG 255 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCE-EEEEETTTTEEEEEEEC--C-SSEEEEEECTTS
T ss_pred CEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCc-EEEEECCCCeEEEEEec--C-CCccEEEEccCC
Confidence 999999987655544445667889999999999998888 6888 99999999999888875 3 358999999999
Q ss_pred CEE-EEEcCCCcEEEEEccCCC
Q 018248 236 QWL-AASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 236 ~~l-~~~~~dg~i~iw~~~~~~ 256 (359)
++| ++++.|+.|++||+.+++
T Consensus 256 ~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 256 KKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTE
T ss_pred CEEEEEcCCCCEEEEEECCCCc
Confidence 977 677889999999999865
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=3.7e-29 Score=203.85 Aligned_cols=278 Identities=11% Similarity=0.042 Sum_probs=186.9
Q ss_pred eEEEEEccCCC---EEEEecCCceEEEEcCCCc-ceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 9 IHHLALNQDHG---CFATGTETGFRVYLSDPYK-PIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 9 v~~~~~s~~g~---~l~~~~d~~i~iw~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
+.++-|-..|- .+++++...|++|+..... -....++. +|..+|..+.+.|+...++.+.-|..+-+.|+..-+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWH-FAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEE-CCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEe-ccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 55666655443 5677779999999998762 12334444 5777888777777654444433322112222221111
Q ss_pred C-----ccEEeeeccCcceeEEEEecceeEEE-----ecCeEEEEEc-ccceeeeeEeccCCCceeeeeec-CCCccEEE
Q 018248 85 E-----NRYLGELSFRSEVKNVRLRRDRIVVV-----LNQKVYVYNF-TDLKLVDQIETVVNPTGLCDVSQ-NAGPMVMA 152 (359)
Q Consensus 85 ~-----~~~~~~~~~~~~v~~~~~~~~~~~~~-----~d~~i~i~d~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~ 152 (359)
. ++.+..-.+...|.++ ++++++. .|+.|++|++ .+++.+..+..|...+..++|++ ++++.+++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~La 197 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALL 197 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEE
T ss_pred CCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEE
Confidence 1 1222221133344443 5777776 2899999999 56888888889999999999999 66666687
Q ss_pred ecCCCCeeEEEEecC-CeeeEEeeccc---ccccEEEEccCCcEE------------EEEeCCCCeEEEEEcCCCcEEEE
Q 018248 153 CPGLLKGQVRVEDYG-TKKSKYITAHA---SRIASIAMTLDGRFV------------ATASSKGTLIRVFNTMDGSLLQE 216 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~-~~~~~~~~~~~---~~i~~~~~s~~~~~l------------~~~~~dg~~i~iwd~~~~~~~~~ 216 (359)
+ |+.|++|+||+.. ++.++.+.+|. ..+.+++|+|+|+++ ++|+.|++ |++||..+++.+..
T Consensus 198 S-gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t-IklWd~~tgk~l~v 275 (356)
T 2w18_A 198 G-TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ-LIVINPKTTLSVGV 275 (356)
T ss_dssp E-EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE-EEEEETTTTEEEEE
T ss_pred E-ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE-EEEEECCCCEEEEE
Confidence 7 7789999999987 56778887654 357778999999976 56788999 99999999988766
Q ss_pred ee---cCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceE
Q 018248 217 MR---RGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKY 293 (359)
Q Consensus 217 ~~---~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (359)
+. ...|...+.+..++ +.++++++.|++|+|||+.+++..
T Consensus 276 ~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l----------------------------------- 318 (356)
T 2w18_A 276 MLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCT----------------------------------- 318 (356)
T ss_dssp EEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEE-----------------------------------
T ss_pred EEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEE-----------------------------------
Confidence 52 11144445544444 889999999999999999998721
Q ss_pred EecccceeEEeecCCc-EEEeeecccCCEEEEEecCCeEEEEEe
Q 018248 294 FSSKWSMAQFRLPENV-QYLVGFGRQNNTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 294 ~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~v~~~ 336 (359)
.+++.|.+. +..++|+|||++|++|+.|++|+||++
T Consensus 319 -------~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 319 -------ALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -------EEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred -------EEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 112223333 446899999999999999999999986
No 116
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=7.8e-30 Score=220.87 Aligned_cols=241 Identities=10% Similarity=0.065 Sum_probs=186.2
Q ss_pred CCCCceEEEEEcc-CCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCC---EEEEEecCCCCCCeE
Q 018248 4 PDPITIHHLALNQ-DHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSN---IICLVNSGPHQSNKV 78 (359)
Q Consensus 4 ~h~~~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---~~~~~~~~~~~d~~i 78 (359)
.|...|.+++|+| ++.+|++++ |+.|++||+.+++...... +...+..+.+.+... .++.++ .|+.|
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v 168 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN----FEETVYSHHMSPVSTKHCLVAVGT----RGPKV 168 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEECSSCSSCCEEEEEE----SSSSE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc----CCCceeeeEeecCCCCCcEEEEEc----CCCeE
Confidence 4899999999999 778999998 9999999999876554433 467888888887543 566555 68999
Q ss_pred EEEECCCccEEeeec-cCcceeEEEEeccee-EEE---ecCeEEEEEcccce-eeeeE---------------eccCCCc
Q 018248 79 MIWDDHENRYLGELS-FRSEVKNVRLRRDRI-VVV---LNQKVYVYNFTDLK-LVDQI---------------ETVVNPT 137 (359)
Q Consensus 79 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~~~---~d~~i~i~d~~~~~-~~~~~---------------~~~~~~~ 137 (359)
++||+.+++.+..+. |...|.+++|+|++. +++ .|+.|++||+++++ .+..+ ..+...+
T Consensus 169 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 248 (408)
T 4a11_B 169 QLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV 248 (408)
T ss_dssp EEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCE
T ss_pred EEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCce
Confidence 999999999988888 899999999999987 344 79999999997654 33333 4567778
Q ss_pred eeeeeecCCCccEEEecCCCCeeEEEEecCCeee-EEeecc-----cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCC
Q 018248 138 GLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKS-KYITAH-----ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDG 211 (359)
Q Consensus 138 ~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~-~~~~~~-----~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~ 211 (359)
..++|+|+++. +++ ++.|+.|++|+...... .....+ ...+........+..+++++.++. |++||+.++
T Consensus 249 ~~~~~~~~~~~--l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~d~~~~ 324 (408)
T 4a11_B 249 NGLCFTSDGLH--LLT-VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGST-IAVYTVYSG 324 (408)
T ss_dssp EEEEECTTSSE--EEE-EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTE-EEEEETTTC
T ss_pred eEEEEcCCCCE--EEE-ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCE-EEEEECcCC
Confidence 88999998765 555 55799999999875332 222111 112222222334556677788898 999999999
Q ss_pred cEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 018248 212 SLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGS 258 (359)
Q Consensus 212 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 258 (359)
+.+..+.. |...|++++|+|++++|++++.||.|++||+++.+..
T Consensus 325 ~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 325 EQITMLKG--HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp CEEEEECC--CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred cceeeecc--CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 99999987 7789999999999999999999999999999988743
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-31 Score=231.36 Aligned_cols=285 Identities=10% Similarity=0.061 Sum_probs=203.8
Q ss_pred CCCCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC
Q 018248 4 PDPITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD 83 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 83 (359)
.|+..|.+++|+|+| .++.+.+|+.+ ......+ +|...|..++|+|++..++.++ .||.|++||.
T Consensus 50 gh~~~v~~V~FsPdg------~~~~~~~~~~~---~~~~~~~--~~~~~V~~vawSPdG~~LAs~s----~dg~V~iwd~ 114 (588)
T 2j04_A 50 CNSKNLFHVKEFPLE------FENKLDFELAQ---QNGLLNS--QPVCYPRVCKPSPIDDWMAVLS----NNGNVSVFKD 114 (588)
T ss_dssp SBGGGTEEEEEECCC------CCCTTTTSCCC---SSCSSTT--SCSCCEEEEEECSSSSCEEEEE----TTSCEEEEET
T ss_pred CCCccEEEEEECCCC------CcceEEEEeCC---CceEeec--CCCCcEEEEEECCCCCEEEEEe----CCCcEEEEeC
Confidence 588999999999999 45566665543 2222333 4688899999999999999988 7899999995
Q ss_pred CCccEEeeeccCc-----ceeEEEEecceeEEE---ecCeEEEEEcccce-------eeeeE----eccCCCceeeeeec
Q 018248 84 HENRYLGELSFRS-----EVKNVRLRRDRIVVV---LNQKVYVYNFTDLK-------LVDQI----ETVVNPTGLCDVSQ 144 (359)
Q Consensus 84 ~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~-------~~~~~----~~~~~~~~~~~~~~ 144 (359)
.+ ++..+.|.. .+.+++|+|+|++++ .||+|++||+.+++ .+.++ .+|...|..++|+|
T Consensus 115 ~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP 192 (588)
T 2j04_A 115 NK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE 192 (588)
T ss_dssp TE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET
T ss_pred Cc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC
Confidence 44 555555343 599999999999998 79999999998774 25666 45667899999999
Q ss_pred CCCccEEEecCCCCeeEEEEecCCeee----EEe-ecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 145 NAGPMVMACPGLLKGQVRVEDYGTKKS----KYI-TAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 145 ~~~~~~l~~~g~~d~~v~~~~~~~~~~----~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
++ +++ ++.|+.|++|+..+... +.+ .+|...|.+++|+ |+.||+++ ++. |++||+.+++......+
T Consensus 193 dg----Laa-ss~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~t-IkLWd~~~~~~~~~~~g 263 (588)
T 2j04_A 193 DV----LVA-ALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGY-VHKIDLKNYSISSLKTG 263 (588)
T ss_dssp TE----EEE-EETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSE-EEEEETTTTEEEEEECS
T ss_pred Cc----EEE-EeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCe-EEEEECCCCeEEEEEcC
Confidence 87 333 33599999999887553 345 4788999999999 68999887 588 99999988777433333
Q ss_pred CCCCcceEEEEe--cCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecc
Q 018248 220 GAERAEIYSLAF--SSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSK 297 (359)
Q Consensus 220 ~~~~~~i~~~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (359)
|.+.+.+++| +||++.|++++.||+ ++|..+.-. +.|++.........+ . .|...
T Consensus 264 --h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~------------~spd~~l~a~~d~~v---~-----lW~~~ 320 (588)
T 2j04_A 264 --SLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELH------------VTADNIIAPYLEKKF---K-----KWSTI 320 (588)
T ss_dssp --CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEE------------EECCCSSHHHHHHHH---H-----HTTTT
T ss_pred --CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEE------------ECCCceEEEEcCCEE---E-----EEECC
Confidence 7889999999 999999999999999 999987211 222221000000000 0 01100
Q ss_pred -cceeEEeecCCcEEEeeecccCCEEEEEec-CCeEEEEEeCC
Q 018248 298 -WSMAQFRLPENVQYLVGFGRQNNTIVIVGL-DGSYYKCEFDP 338 (359)
Q Consensus 298 -~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~v~~~~~ 338 (359)
..+..++. ...|.+++|||||+.+|+++. +..+.-|.+..
T Consensus 321 g~~l~~~~~-~~~I~~va~SPdG~~lA~~~~i~~~~~~y~i~s 362 (588)
T 2j04_A 321 WNEFNNYET-TLVIHGISLSPDGYSIAIVYDMERVAFKYKIAS 362 (588)
T ss_dssp TTSSSSSCC-EEEEEEEEECTTSSEEEEEEEEECSSCCCCCSS
T ss_pred CCceeeecc-ceEEEEEEECCCCCEEEEEEeccCceeEEeecc
Confidence 00111111 235889999999999999887 33334455444
No 118
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.8e-29 Score=218.83 Aligned_cols=256 Identities=11% Similarity=0.123 Sum_probs=189.8
Q ss_pred CCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc---EEeeec-c-------------------------------
Q 018248 50 RGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR---YLGELS-F------------------------------- 94 (359)
Q Consensus 50 ~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~---~~~~~~-~------------------------------- 94 (359)
..++.+++++++++.++.+. ++.|++||+.+++ .+..+. +
T Consensus 4 ~~p~~~v~~s~dg~~l~~~~-----~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAII-----KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKS 78 (450)
T ss_dssp ECCCCEEEECSSSSEEEEEE-----TTEEEEEEEETTTEEEEEEEEECCC------------------------------
T ss_pred cccEEEEEecCCCCEEEEEe-----CCeEEEEECCCCCcceeeeecCCccccccccccccchhhcccccccccccccccc
Confidence 35778889999998544433 5899999999988 555544 1
Q ss_pred -----------------------CcceeEEEEecceeEE-E---ecCeEEEEEcc--cceeeeeEe--ccCCCceeeeee
Q 018248 95 -----------------------RSEVKNVRLRRDRIVV-V---LNQKVYVYNFT--DLKLVDQIE--TVVNPTGLCDVS 143 (359)
Q Consensus 95 -----------------------~~~v~~~~~~~~~~~~-~---~d~~i~i~d~~--~~~~~~~~~--~~~~~~~~~~~~ 143 (359)
...|.+++|+|++.++ + .|+.|++||+. +++.+..+. .+...+..++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 158 (450)
T 2vdu_B 79 NKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA 158 (450)
T ss_dssp ---------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC
T ss_pred CcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEc
Confidence 1259999999999885 4 78999999998 788888776 456778889999
Q ss_pred cCCCccEEEecCCCCeeEEEEecCCe-----eeEEeecccccccEEEEccC---CcEEEEEeCCCCeEEEEEcCCCcEEE
Q 018248 144 QNAGPMVMACPGLLKGQVRVEDYGTK-----KSKYITAHASRIASIAMTLD---GRFVATASSKGTLIRVFNTMDGSLLQ 215 (359)
Q Consensus 144 ~~~~~~~l~~~g~~d~~v~~~~~~~~-----~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~~i~iwd~~~~~~~~ 215 (359)
|++.. +++ |+.+|.+++|+.... ....+.+|...|.+++|+|+ +++|++++.|+. |++||+++++.+.
T Consensus 159 p~~~~--l~~-~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~-i~vwd~~~~~~~~ 234 (450)
T 2vdu_B 159 EDDTT--VII-ADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEH-IKISHYPQCFIVD 234 (450)
T ss_dssp TTSSE--EEE-EETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSC-EEEEEESCTTCEE
T ss_pred CCCCE--EEE-EeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCc-EEEEECCCCceee
Confidence 98865 555 556999999876542 22367889999999999999 999999999999 9999999999887
Q ss_pred EeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCc---cccCCCCCccCCCCCceeeeeEeeeecce
Q 018248 216 EMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSK---LHSASEPNLSSKNSSAISSFRFIRGVLPK 292 (359)
Q Consensus 216 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (359)
.+..+ |...|.+++|+ ++++|++++.|+.|++||+.+++....... .....+.... .+.
T Consensus 235 ~~~~~-h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~ 296 (450)
T 2vdu_B 235 KWLFG-HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHL----------------APP 296 (450)
T ss_dssp EECCC-CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSB----------------C--
T ss_pred eeecC-CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccc----------------ccc
Confidence 75422 77899999999 999999999999999999998763210000 0000000000 000
Q ss_pred EEecccceeEEeecCCcEEEeeecccCCEEEEEe-cCCeEEEEEe
Q 018248 293 YFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVG-LDGSYYKCEF 336 (359)
Q Consensus 293 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~~~ 336 (359)
.+... ........+..++|+|++++|++++ .||.|++|++
T Consensus 297 ~~~~~----~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 297 RFQNE----NNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred ccccc----ccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 00000 0001224678999999999999999 8999999999
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.5e-29 Score=214.56 Aligned_cols=241 Identities=12% Similarity=0.102 Sum_probs=193.0
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEE--eccCCEEEEEecCCCCCCeEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSM--LFRSNIICLVNSGPHQSNKVMI 80 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~~~~~d~~i~i 80 (359)
.|...|.+++|+|++++|++++ |+.|++||+++++... .. +|...+..++| .++++.++.++ .|+.|++
T Consensus 84 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~--~~~~~v~~~~~~~~~~~~~l~~~~----~dg~i~v 155 (368)
T 3mmy_A 84 MHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ--IA--QHDAPVKTIHWIKAPNYSCVMTGS----WDKTLKF 155 (368)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--EE--ECSSCEEEEEEEECSSCEEEEEEE----TTSEEEE
T ss_pred cccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee--ec--cccCceEEEEEEeCCCCCEEEEcc----CCCcEEE
Confidence 4889999999999999999999 9999999999765443 22 58999999999 55555566655 6899999
Q ss_pred EECCCccEEeeeccCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeE--eccCCCceeeeeecCCCc--cEEEecC
Q 018248 81 WDDHENRYLGELSFRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQI--ETVVNPTGLCDVSQNAGP--MVMACPG 155 (359)
Q Consensus 81 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~l~~~g 155 (359)
||+.+++.+..+.....+.++.+.++..+++ .++.+++|++......... ........++++.++... ..+++ +
T Consensus 156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 234 (368)
T 3mmy_A 156 WDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFAL-G 234 (368)
T ss_dssp ECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEE-E
T ss_pred EECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEE-e
Confidence 9999999999998777888888888766666 8999999999765433222 123344556666665543 22444 6
Q ss_pred CCCeeEEEEecCC----eeeEEeecccc------------cccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 156 LLKGQVRVEDYGT----KKSKYITAHAS------------RIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 156 ~~d~~v~~~~~~~----~~~~~~~~~~~------------~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
+.|+.|++|+.+. .....+..|.. .|.+++|+|++++|++++.||. |++||+++++.+..+..
T Consensus 235 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 235 SIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-FSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp ETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC-EEEEETTTTEEEEECCC
T ss_pred cCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe-EEEEECCCCcEEEEecC
Confidence 6799999998876 34566777765 7999999999999999999999 99999999999999886
Q ss_pred CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 220 GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 220 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
|...|.+++|+|+|++|++++.|+..+.|++-..+
T Consensus 314 --~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 314 --LDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQ 348 (368)
T ss_dssp --CSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCTT
T ss_pred --CCCCceEEEECCCCCeEEEEecccccccccccCCC
Confidence 77899999999999999999999876666655443
No 120
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=4.3e-29 Score=218.21 Aligned_cols=231 Identities=14% Similarity=0.251 Sum_probs=186.6
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++| ++++|++|+ ||.|++||+++++.. ..+. +|...+..+++. ++.++.++ .|+.|++||
T Consensus 171 ~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~l~~~--~~~l~s~s----~dg~i~vwd 239 (435)
T 1p22_A 171 GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML--NTLI-HHCEAVLHLRFN--NGMMVTCS----KDRSIAVWD 239 (435)
T ss_dssp CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE--EEEC-CCCSCEEEEECC--TTEEEEEE----TTSCEEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE--EEEc-CCCCcEEEEEEc--CCEEEEee----CCCcEEEEe
Confidence 58899999999 788999999 999999999987655 4444 788888877764 56666666 789999999
Q ss_pred CCCccEE---eeec-cCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCC
Q 018248 83 DHENRYL---GELS-FRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 83 ~~~~~~~---~~~~-~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
+.+++.+ ..+. |...|.++++..+-...+ .|+.|++||+++++.+..+..|...+.++.+. ++ ++++ |+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~--~l~~-g~~ 314 (435)
T 1p22_A 240 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DR--LVVS-GSS 314 (435)
T ss_dssp CSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TT--EEEE-EET
T ss_pred CCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CC--EEEE-EeC
Confidence 9887655 3444 889999999943322222 89999999999999999999988888777763 33 3555 667
Q ss_pred CeeEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc---------EEEEeecCCCCcceE
Q 018248 158 KGQVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGS---------LLQEMRRGAERAEIY 227 (359)
Q Consensus 158 d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~---------~~~~~~~~~~~~~i~ 227 (359)
||.|++|+.. +..+..+.+|...|.+++| ++.+|++|+.||. |++||+.+++ .+..+.. |.+.|.
T Consensus 315 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~--h~~~v~ 389 (435)
T 1p22_A 315 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-IKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVF 389 (435)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC-EEEEEHHHHTSTTSCTTTTEEEEECC--CSSCCC
T ss_pred CCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc-EEEEECCCCCCccccccchheeeccC--CCCCeE
Confidence 9999999876 5778888999999999999 7889999999999 9999997766 7778876 778999
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEEccCCCC
Q 018248 228 SLAFSSNAQWLAASSDKGTVHVFGLKVDSG 257 (359)
Q Consensus 228 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~ 257 (359)
+++| ++++|++++.||.|++||+.+...
T Consensus 390 ~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 390 RLQF--DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp CEEE--CSSCEEECCSSSEEEEEC------
T ss_pred EEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence 9999 788999999999999999988663
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.3e-29 Score=212.93 Aligned_cols=228 Identities=14% Similarity=0.200 Sum_probs=170.7
Q ss_pred ccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE--ecCeEEEEEcc---------cceeee
Q 018248 60 FRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV--LNQKVYVYNFT---------DLKLVD 128 (359)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~---------~~~~~~ 128 (359)
++++.++.++ .|+.|++||+.+++.+..+. ...|.++.++|+ ++. .|++|++|+.. +++.+.
T Consensus 46 ~d~~~l~sg~----~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 46 YDKWVCMCRC----EDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp EEEEEEEEEE----ETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred CCCCEEEEEC----CCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence 3445555555 68999999999998888776 456778888887 333 78888888654 444444
Q ss_pred eEe-ccCCCceeeeeec--CCCccEEEecCCCCeeEEEEecCCeee-EEe-ecccccccEEEEccCCcEEEEEeCCCCeE
Q 018248 129 QIE-TVVNPTGLCDVSQ--NAGPMVMACPGLLKGQVRVEDYGTKKS-KYI-TAHASRIASIAMTLDGRFVATASSKGTLI 203 (359)
Q Consensus 129 ~~~-~~~~~~~~~~~~~--~~~~~~l~~~g~~d~~v~~~~~~~~~~-~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~~i 203 (359)
.+. .+...+..++++| +++. +++ ++.|+.|++|+...... ... ..+...+.+++|+|++.+|++|+.||. |
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~--l~s-~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~-i 194 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEY--FIW-ADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGI-L 194 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCE--EEE-EETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSC-E
T ss_pred EeecCCCCCEEEEEcCCCCCCCE--EEE-EeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCE-E
Confidence 444 4556788899999 6654 665 56899999999876443 333 345568999999999999999999999 9
Q ss_pred EEEEcCCCcEE-EEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceee
Q 018248 204 RVFNTMDGSLL-QEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISS 282 (359)
Q Consensus 204 ~iwd~~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (359)
++||+++++.+ ..+.. .|..+|++++|+|++.+|++++. +.|++||+++.+....
T Consensus 195 ~iwd~~~~~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~---------------------- 250 (343)
T 3lrv_A 195 DVYNLSSPDQASSRFPV-DEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLA---------------------- 250 (343)
T ss_dssp EEEESSCTTSCCEECCC-CTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBS----------------------
T ss_pred EEEECCCCCCCccEEec-cCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCccee----------------------
Confidence 99999999887 67764 26789999999999999999994 5999999998763210
Q ss_pred eeEeeeecceEEecccceeEEeecCCcE--EEeeecccCCEEEEEec-CCeEEEEEeCCC
Q 018248 283 FRFIRGVLPKYFSSKWSMAQFRLPENVQ--YLVGFGRQNNTIVIVGL-DGSYYKCEFDPM 339 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~s~~~~~l~~~~~-dg~i~v~~~~~~ 339 (359)
+.. +..+...+ .+++|+|++++|++++. |+.+++|+++..
T Consensus 251 -----------~~~------~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 251 -----------YPT------YTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp -----------SCC------CBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred -----------ecc------cccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 000 00001111 46999999999999999 999999999754
No 122
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1e-27 Score=210.12 Aligned_cols=230 Identities=16% Similarity=0.257 Sum_probs=193.1
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++|+ +.+|++|+ |+.|++||+++++.. ..+. +|...+.++.+ +++.++.++ .|+.|++||
T Consensus 157 ~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~--~~~~l~s~s----~dg~i~~wd 225 (445)
T 2ovr_B 157 GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECI--HTLY-GHTSTVRCMHL--HEKRVVSGS----RDATLRVWD 225 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEE--ETTEEEEEE----TTSEEEEEE
T ss_pred CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEE--EEEC-CCCCcEEEEEe--cCCEEEEEe----CCCEEEEEE
Confidence 588999999998 56899998 999999999987554 4444 78888887776 467777766 789999999
Q ss_pred CCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLK 158 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 158 (359)
+.+++.+..+. |...|.++.+. +..++ .|+.|++||+++++.+..+..|...+..+++ ++.. +++ |+.|
T Consensus 226 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~--l~~-~~~d 298 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIH--VVS-GSLD 298 (445)
T ss_dssp SSSCCEEEEEECCSSCEEEEEEC--SSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSE--EEE-EETT
T ss_pred CCCCcEEEEEcCCcccEEEEEEC--CCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCE--EEE-EeCC
Confidence 99999998887 89999999993 44444 8999999999999999999988888877777 4443 555 5679
Q ss_pred eeEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecC-CCCcceEEEEecCCCC
Q 018248 159 GQVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRG-AERAEIYSLAFSSNAQ 236 (359)
Q Consensus 159 ~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~ 236 (359)
+.|++|+.. ++.+..+.+|...+.++.+ ++++|++++.||. |++||+++++.+..+... .|...|.+++|+ ++
T Consensus 299 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~ 373 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN 373 (445)
T ss_dssp SCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SS
T ss_pred CeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCe-EEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CC
Confidence 999998875 5677788899998888877 5679999999999 999999999999888752 266789999995 67
Q ss_pred EEEEEcCCCcEEEEEccCCC
Q 018248 237 WLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 237 ~l~~~~~dg~i~iw~~~~~~ 256 (359)
+|++++.||.|++||+.+++
T Consensus 374 ~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 374 FVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp EEEEEETTSEEEEEETTTCC
T ss_pred EEEEEeCCCeEEEEECCCCc
Confidence 99999999999999999876
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.6e-27 Score=208.15 Aligned_cols=238 Identities=12% Similarity=0.136 Sum_probs=194.9
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...|.+++|+|+++++++++ |+.|++||+++++.... +. .|...+..++++++++.+++++. .++.|++||
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~---~~~~i~~~d 240 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT--VD-LTGKWSKILLYDPIRDLVYCSNW---ISEDISVID 240 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE--EE-CSSSSEEEEEEETTTTEEEEEET---TTTEEEEEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE--Ec-CCCCCeeEEEEcCCCCEEEEEec---CCCcEEEEE
Confidence 4677999999999999999999 99999999987665533 33 57888999999999888766653 479999999
Q ss_pred CCCccEEeeeccCcceeEEEEecceeEEE--e---------cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEE
Q 018248 83 DHENRYLGELSFRSEVKNVRLRRDRIVVV--L---------NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVM 151 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (359)
+.+++.+..+.....+.+++|+|++..++ . |+.|++||+.+++.+..+.. ...+..++|+|+++.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 241 RKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-PGNKRHIVSGNTENKIYV 319 (433)
T ss_dssp TTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-EECEEEEEECSSTTEEEE
T ss_pred CCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC-CCCcceEEECCCCCEEEE
Confidence 99999988888777799999999997666 2 67999999998887776643 345677899998876333
Q ss_pred EecCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeC---------------CCCeEEEEEcCCCcEEEE
Q 018248 152 ACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASS---------------KGTLIRVFNTMDGSLLQE 216 (359)
Q Consensus 152 ~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------------dg~~i~iwd~~~~~~~~~ 216 (359)
+ +..++.|++|+...........+...+.+++|+|++++|++++. ||. |++||+.+++.+..
T Consensus 320 ~--~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~-v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 320 S--DMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK-VYVIDTTTDTVKEF 396 (433)
T ss_dssp E--ETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE-EEEEETTTTEEEEE
T ss_pred E--ecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE-EEEEECCCCcEEEE
Confidence 3 55799999999875444333347788999999999999888876 468 99999999999988
Q ss_pred eecCCCCcceEEEEecCCCCEEEEEcC-CCcEEEEEccC
Q 018248 217 MRRGAERAEIYSLAFSSNAQWLAASSD-KGTVHVFGLKV 254 (359)
Q Consensus 217 ~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~ 254 (359)
+.. ...+.+++|+|+|++|++++. |+.|++|+++.
T Consensus 397 ~~~---~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 397 WEA---GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEC---SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ecC---CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 875 357899999999999988764 99999999864
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=2.1e-28 Score=211.91 Aligned_cols=279 Identities=10% Similarity=0.066 Sum_probs=204.7
Q ss_pred CceEEEEEccCCC-EEEEec-----CC----ceEEEEc--CCCcceeeeecccCCCCceeEEEEecc-------------
Q 018248 7 ITIHHLALNQDHG-CFATGT-----ET----GFRVYLS--DPYKPIMRRDFDRNPRGGTQLVSMLFR------------- 61 (359)
Q Consensus 7 ~~v~~~~~s~~g~-~l~~~~-----d~----~i~iw~~--~~~~~~~~~~~~~~h~~~v~~~~~~~~------------- 61 (359)
..+...+|++.|. ++++|+ +| .+++||+ .+++......+. +|...+..+++.+.
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYK-VNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEE-ECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEE-cChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 4677888888886 445664 46 7999999 887766555555 67776665555431
Q ss_pred -CCEEEEEecCCCCC---CeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ec---CeEEEEEcccceeeeeE
Q 018248 62 -SNIICLVNSGPHQS---NKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LN---QKVYVYNFTDLKLVDQI 130 (359)
Q Consensus 62 -~~~~~~~~~~~~~d---~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d---~~i~i~d~~~~~~~~~~ 130 (359)
+..+++++... .+ +.|++||+..+. ...+. |...+.+++|+|+++.++ .+ ..|++||+.+++.. .+
T Consensus 142 ~~~~l~~~s~~~-~~~~~~~i~i~d~~g~~-~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l 218 (415)
T 2hqs_A 142 FRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QV 218 (415)
T ss_dssp TTCEEEEEEECS-SSSCCEEEEEEETTSCS-CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EE
T ss_pred CCCEEEEEEecC-CCCccceEEEEcCCCCC-CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Ee
Confidence 55666666432 23 799999987544 44444 888999999999998887 33 49999999888765 45
Q ss_pred eccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeC-CC--CeEEEEE
Q 018248 131 ETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASS-KG--TLIRVFN 207 (359)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg--~~i~iwd 207 (359)
..+...+..++|+|+++.++++.....+..|++|+........+..|...+.+++|+|||++|++++. ++ . |++||
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~-i~~~d 297 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQ-VYKVN 297 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCE-EEEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcE-EEEEE
Confidence 56677788999999998744333222234588888887777888888899999999999999988876 44 5 77789
Q ss_pred cCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC---CcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeee
Q 018248 208 TMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK---GTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFR 284 (359)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (359)
+.+++.. .+.. +...+.+++|+|||++|++++.+ ..|++||+.+++..
T Consensus 298 ~~~~~~~-~l~~--~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-------------------------- 348 (415)
T 2hqs_A 298 INGGAPQ-RITW--EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-------------------------- 348 (415)
T ss_dssp TTSSCCE-ECCC--SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE--------------------------
T ss_pred CCCCCEE-EEec--CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE--------------------------
Confidence 8887643 3433 45688999999999999888764 57999999886511
Q ss_pred EeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCC---eEEEEEeC
Q 018248 285 FIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDG---SYYKCEFD 337 (359)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~v~~~~ 337 (359)
. +..+ ..+..++|+|||+.|++++.++ .|++|+++
T Consensus 349 --------~---------l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 349 --------V---------LSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp --------E---------CCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred --------E---------ecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 0 0011 2567899999999999998876 67888765
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=8.2e-28 Score=204.15 Aligned_cols=229 Identities=13% Similarity=0.091 Sum_probs=174.1
Q ss_pred CCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE----ecCeEEEEEccc
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV----LNQKVYVYNFTD 123 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~d~~i~i~d~~~ 123 (359)
+|...|.+++|+++++.++.++ +..+++|++.+++......+. .+..+.+.+++..++ .|+.|++||+.+
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~-----~~~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILST-----LKSFEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEEC-----SSEEEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred cCCCceEEEEECCCCCEEEEEc-----CCEEEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 7899999999999999877654 346899999888776655433 477788888776554 678999999999
Q ss_pred ceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCe--eeEEeecccccccEEEEccCCcEEEE--EeCC
Q 018248 124 LKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK--KSKYITAHASRIASIAMTLDGRFVAT--ASSK 199 (359)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~d 199 (359)
++.+..+. +...+..++++++ ..+++ .++.|++|+.... .+..+.. +...+++++ .++++ |+.+
T Consensus 91 ~~~~~~~~-~~~~v~~v~~~~~--~~~~~----~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~ 158 (355)
T 3vu4_A 91 KQDVSRIK-VDAPVKDLFLSRE--FIVVS----YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNL 158 (355)
T ss_dssp TEEEEEEE-CSSCEEEEEECSS--EEEEE----ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCT
T ss_pred CcEEEEEE-CCCceEEEEEcCC--EEEEE----EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcC
Confidence 99988887 4556777777654 33332 3778999988754 4444433 444566777 56666 5789
Q ss_pred CCeEEEEEcCCCc---------------E-EEEeecCCCCcceEEEEecCCCCEEEEEcCCCc-EEEEEccCCCCCCCCC
Q 018248 200 GTLIRVFNTMDGS---------------L-LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGT-VHVFGLKVDSGSPGTS 262 (359)
Q Consensus 200 g~~i~iwd~~~~~---------------~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~iw~~~~~~~~~~~~ 262 (359)
|. |++||+.+++ + +..+.. |...|++++|+|+|++|++++.|++ |+|||+++++..
T Consensus 159 g~-v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~--h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~---- 231 (355)
T 3vu4_A 159 GQ-IHITKLQSSGSATTQDQGVQQKAILGKGVLIKA--HTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV---- 231 (355)
T ss_dssp TC-EEEEECCC------------------CCEEECC--CSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE----
T ss_pred cE-EEEEECCCCCccccccccccccccCcccEEEEc--cCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE----
Confidence 99 9999998865 1 556665 7889999999999999999999998 999999987621
Q ss_pred ccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEe-e-cCCcEEEeeecccCCEEEEEecCCeEEEEEeCCC
Q 018248 263 KLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFR-L-PENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDPM 339 (359)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~~ 339 (359)
..++ . +.+.|.+++|+|++++|++++.||.|++|++...
T Consensus 232 --------------------------------------~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 232 --------------------------------------REFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp --------------------------------------EEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred --------------------------------------EEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 1122 2 5678999999999999999999999999999764
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.1e-28 Score=199.37 Aligned_cols=175 Identities=11% Similarity=0.097 Sum_probs=134.3
Q ss_pred CCCeEEEEEC-CCccEEeeec-cCcceeEEEEec---ceeEEE---ecCeEEEEEcccceeeeeEeccCC---Cceeeee
Q 018248 74 QSNKVMIWDD-HENRYLGELS-FRSEVKNVRLRR---DRIVVV---LNQKVYVYNFTDLKLVDQIETVVN---PTGLCDV 142 (359)
Q Consensus 74 ~d~~i~iwd~-~~~~~~~~~~-~~~~v~~~~~~~---~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~---~~~~~~~ 142 (359)
.|+.|++|++ .+++.+..+. |...+..++|++ ++.+++ .|++|+|||+++++.++++..+.. .+..++|
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 5899999999 5588888777 888999999999 667777 799999999999999999986543 3445689
Q ss_pred ecCCCccEE---------EecCCCCeeEEEEecCCee-eEEe-----ecccccccEEEEccCCcEEEEEeCCCCeEEEEE
Q 018248 143 SQNAGPMVM---------ACPGLLKGQVRVEDYGTKK-SKYI-----TAHASRIASIAMTLDGRFVATASSKGTLIRVFN 207 (359)
Q Consensus 143 ~~~~~~~~l---------~~~g~~d~~v~~~~~~~~~-~~~~-----~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd 207 (359)
+|++..++. +.+|+.|+++++|+..... +..+ .+|...+.+..+ ++.++++++.|++ |+|||
T Consensus 235 SpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgT-IkIWD 311 (356)
T 2w18_A 235 SEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGT-IAIWD 311 (356)
T ss_dssp EETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSC-EEEEE
T ss_pred CCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCc-EEEEE
Confidence 998764321 2347889999999877543 3333 255555443333 4789999999999 99999
Q ss_pred cCCCcEEEEeecCCCCcc-eEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 018248 208 TMDGSLLQEMRRGAERAE-IYSLAFSSNAQWLAASSDKGTVHVFGLK 253 (359)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 253 (359)
+.+++++.++.+ |... +..++|||||++|++|+.|++|+|||+.
T Consensus 312 l~tGk~l~tL~g--H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 312 LLLGQCTALLPP--VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TTTCSEEEEECC--C--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CCCCcEEEEecC--CCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 999999999986 4444 4468999999999999999999999963
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=1.5e-25 Score=199.74 Aligned_cols=281 Identities=11% Similarity=0.109 Sum_probs=209.8
Q ss_pred EEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC--CCccEE
Q 018248 13 ALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD--HENRYL 89 (359)
Q Consensus 13 ~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~--~~~~~~ 89 (359)
+|+|++.+++++. ++.|.+||..+++....... +|. +..++++++++.+++++ .|+.|.+||+ .+++.+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~--g~~--~~~v~~spdg~~l~v~~----~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT--GYA--VHISRMSASGRYLLVIG----RDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC--STT--EEEEEECTTSCEEEEEE----TTSEEEEEETTSSSCEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec--Ccc--cceEEECCCCCEEEEEC----CCCeEEEEECcCCCCcEE
Confidence 4889998888888 99999999998776543332 333 78889999999998888 6799999999 889999
Q ss_pred eeeccCcceeEEEEec----ceeEEE----ecCeEEEEEcccceeeeeEecc-----------CCCceeeeeecCCCccE
Q 018248 90 GELSFRSEVKNVRLRR----DRIVVV----LNQKVYVYNFTDLKLVDQIETV-----------VNPTGLCDVSQNAGPMV 150 (359)
Q Consensus 90 ~~~~~~~~v~~~~~~~----~~~~~~----~d~~i~i~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 150 (359)
.++.+...+..++|+| ++++++ .+++|.+||..+++++..+..+ ...+..+.+++++...+
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 8888777889999999 998776 5899999999999998888652 12456788888877543
Q ss_pred EEecCCCCeeEEEEecCC-eeeE--EeecccccccEEEEccCCcEEEEEe-CCCCeEEEEEcCCCcEEEEeecCC--CCc
Q 018248 151 MACPGLLKGQVRVEDYGT-KKSK--YITAHASRIASIAMTLDGRFVATAS-SKGTLIRVFNTMDGSLLQEMRRGA--ERA 224 (359)
Q Consensus 151 l~~~g~~d~~v~~~~~~~-~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~~~~~~~~~~~~--~~~ 224 (359)
++ ...++.|.+|+... +.+. .+ .+...+..++|+|+|+++++++ .++. |.+||+.+++++..+..+. |.+
T Consensus 296 -vs-~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~-v~v~D~~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 296 -VN-VKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNK-VAVIDSKDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp -EE-ETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSBCCT
T ss_pred -EE-ECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCe-EEEEECCCCeEEEeeccCCCCCCC
Confidence 33 55789999988754 2222 33 3566788999999999876655 5778 9999999999988887532 333
Q ss_pred ceEEEEecCC-CCEEEEEc-CCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeE
Q 018248 225 EIYSLAFSSN-AQWLAASS-DKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQ 302 (359)
Q Consensus 225 ~i~~~~~s~~-~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (359)
....+ ++|+ +..++++. .|++|.+||+.+..... ..+ ....+
T Consensus 372 ~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~---------------------~~~--------------~~v~~ 415 (543)
T 1nir_A 372 RGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ---------------------YAW--------------KKVAE 415 (543)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT---------------------TBT--------------SEEEE
T ss_pred CCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCch---------------------hcC--------------eEEEE
Confidence 33333 4677 66677765 68999999998843110 000 01122
Q ss_pred EeecCCcEEEeeecccCCEEEEEe-------cCCeEEEEEeCCCCC
Q 018248 303 FRLPENVQYLVGFGRQNNTIVIVG-------LDGSYYKCEFDPMKG 341 (359)
Q Consensus 303 ~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~i~v~~~~~~~~ 341 (359)
+..+.+.+..++|+||+++|++++ .+++|.+|++...+.
T Consensus 416 l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 416 LQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 444555667799999999999987 377999999986543
No 128
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=4.9e-26 Score=212.05 Aligned_cols=279 Identities=8% Similarity=-0.000 Sum_probs=202.2
Q ss_pred CCceEEEEEccCCCEEEEec--CC-----ceEEEEcCCCcceeeeecccCCC----------------------CceeEE
Q 018248 6 PITIHHLALNQDHGCFATGT--ET-----GFRVYLSDPYKPIMRRDFDRNPR----------------------GGTQLV 56 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~--d~-----~i~iw~~~~~~~~~~~~~~~~h~----------------------~~v~~~ 56 (359)
...|.+++|||||++|++++ |+ .|++||+++++........ ++. ..+..+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSK-VVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGG-GTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchh-hcccccccccchhhhhhhhhhhccccCccee
Confidence 56799999999999998877 56 7999999987654333321 122 236788
Q ss_pred EEeccCCEEEEEecCCCCCCeEEEEECCCc---cEEeeeccCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeEe
Q 018248 57 SMLFRSNIICLVNSGPHQSNKVMIWDDHEN---RYLGELSFRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIE 131 (359)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~ 131 (359)
+|+++++.+++++ ++.|++||+.++ +......+...+..++|+|||+.++ .++.|++||+.+++......
T Consensus 115 ~~SpDg~~l~~~~-----~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 115 QWSPDAQRLLFPL-----GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp EECTTSSEEEEEE-----TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCC
T ss_pred EECCCCCEEEEEe-----CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEecc
Confidence 9999999999887 389999999988 5444334778899999999999887 88899999998877655443
Q ss_pred ccCCC----------------ceeeeeecCCCccEEEecCCCCe---------------------------------eEE
Q 018248 132 TVVNP----------------TGLCDVSQNAGPMVMACPGLLKG---------------------------------QVR 162 (359)
Q Consensus 132 ~~~~~----------------~~~~~~~~~~~~~~l~~~g~~d~---------------------------------~v~ 162 (359)
.+... +..++|+|+++.++++. .|+ .|+
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~---~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR---IDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE---EECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEE---EcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 33221 36689999998754443 222 566
Q ss_pred EEecCC-eeeEEee---cccccccEEEEccCCcEEEEEeC-----CCCeEEEEEcCCCcEEEEeecCCCCc---ceEEEE
Q 018248 163 VEDYGT-KKSKYIT---AHASRIASIAMTLDGRFVATASS-----KGTLIRVFNTMDGSLLQEMRRGAERA---EIYSLA 230 (359)
Q Consensus 163 ~~~~~~-~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~-----dg~~i~iwd~~~~~~~~~~~~~~~~~---~i~~~~ 230 (359)
+|+..+ .....+. .|...+..++| |||++|++++. +.. |++||+.+++....+..+ ... .+..++
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~ 343 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD-LVEVTLASNQQRVLAHET-SPTWVPLHNSLR 343 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE-EEEEETTTCCEEEEEEEE-CSSCCCCCSCCE
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE-EEEEECCCCceEEEEEcC-CCCcCCcCCceE
Confidence 677665 5444443 46778999999 99999987754 456 999999999887766542 112 346899
Q ss_pred ecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcE
Q 018248 231 FSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQ 310 (359)
Q Consensus 231 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (359)
|+|||+++++++.||.++||.++..... + .+..+...+
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~~~~~---------------------------------~---------~l~~~~~~v 381 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDSKGKA---------------------------------A---------ALTHGNWSV 381 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECSSSCE---------------------------------E---------ESCCSSSCE
T ss_pred ECCCCeEEEEecCCCccEEEEEcCCCCe---------------------------------e---------eeeecceEE
Confidence 9999999999999998899988643200 0 011122345
Q ss_pred EEe-eecccCCEEEEEec-CC--eEEEEEeCC
Q 018248 311 YLV-GFGRQNNTIVIVGL-DG--SYYKCEFDP 338 (359)
Q Consensus 311 ~~~-~~s~~~~~l~~~~~-dg--~i~v~~~~~ 338 (359)
..+ +|+||++.|++.+. ++ .+++|.++.
T Consensus 382 ~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 382 DELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp EEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred EeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 555 69999988765554 55 899999875
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=1.4e-24 Score=193.60 Aligned_cols=283 Identities=11% Similarity=0.051 Sum_probs=205.6
Q ss_pred eEEEEEccCCCEEEEec-CCceEEEEc--CCCcceeeeecccCCCCceeEEEEec----cCCEEEEEecCCCCCCeEEEE
Q 018248 9 IHHLALNQDHGCFATGT-ETGFRVYLS--DPYKPIMRRDFDRNPRGGTQLVSMLF----RSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 9 v~~~~~s~~g~~l~~~~-d~~i~iw~~--~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~~~~~~~~~~~d~~i~iw 81 (359)
+.+++|+|||++|++++ |+.|++||+ .+++.. ..+. +......+++++ +++.+++++. .+++|.+|
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~--~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~---~~~~v~v~ 253 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV--AEIK--IGIEARSVESSKFKGYEDRYTIAGAY---WPPQFAIM 253 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE--EEEE--CCSEEEEEEECCSTTCTTTEEEEEEE---ESSEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE--EEEe--cCCCcceEEeCCCcCCCCCEEEEEEc---cCCeEEEE
Confidence 88999999999999999 999999999 665443 4443 355678889999 8888877663 36999999
Q ss_pred ECCCccEEeeecc------------CcceeEEEEecceeEEE----ecCeEEEEEcccceeee--eEeccCCCceeeeee
Q 018248 82 DDHENRYLGELSF------------RSEVKNVRLRRDRIVVV----LNQKVYVYNFTDLKLVD--QIETVVNPTGLCDVS 143 (359)
Q Consensus 82 d~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~ 143 (359)
|..+++++..+.. ...+..+.++|++..++ .++.|.+||..+.+.+. .+. +......++|+
T Consensus 254 D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~s 332 (543)
T 1nir_A 254 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWD 332 (543)
T ss_dssp ETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEEC
T ss_pred eccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceEC
Confidence 9999999888752 12688999999765444 78999999997765443 443 34456678999
Q ss_pred cCCCccEEEecCCCCeeEEEEecCC-eeeEEeec----ccccccEEEEccC-CcEEEEEe-CCCCeEEEEEcCC------
Q 018248 144 QNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITA----HASRIASIAMTLD-GRFVATAS-SKGTLIRVFNTMD------ 210 (359)
Q Consensus 144 ~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~----~~~~i~~~~~s~~-~~~l~~~~-~dg~~i~iwd~~~------ 210 (359)
|+++.++++ +..+++|.+|+... +.+..+.. |.+....+ ++|+ +.+++++. .|++ |.+||+.+
T Consensus 333 pdg~~l~va--~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~-V~v~d~~~~~~~~~ 408 (543)
T 1nir_A 333 SSHRYFMTA--ANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGS-ISLIGTDPKNHPQY 408 (543)
T ss_dssp TTSCEEEEE--EGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE-EEEEECCTTTCTTT
T ss_pred CCCCEEEEE--ecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCce-EEEEEeCCCCCchh
Confidence 998864433 44578999987754 55555553 44333333 4677 66677775 5788 99999988
Q ss_pred -CcEEEEeecCCCCcceEEEEecCCCCEEEEEc-------CCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceee
Q 018248 211 -GSLLQEMRRGAERAEIYSLAFSSNAQWLAASS-------DKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISS 282 (359)
Q Consensus 211 -~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (359)
++.++++.. +...+..++++|+|++|++++ .+++|.|||+.+.+...
T Consensus 409 ~~~~v~~l~~--~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~----------------------- 463 (543)
T 1nir_A 409 AWKKVAELQG--QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKY----------------------- 463 (543)
T ss_dssp BTSEEEEEEC--SCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCC-----------------------
T ss_pred cCeEEEEEEc--CCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCe-----------------------
Confidence 889999987 556788999999999999987 26799999999887321
Q ss_pred eeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEe-----cCCeEEEEEeCC
Q 018248 283 FRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVG-----LDGSYYKCEFDP 338 (359)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----~dg~i~v~~~~~ 338 (359)
+.+... ....+.-+...+..++|+|||+.|+++. .|+.|.||+..+
T Consensus 464 ---------~~~~v~-~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 464 ---------QVLPIA-EWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp ---------EEECHH-HHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred ---------EEeech-hhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 000000 0000111234678899999999998773 379999997655
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=1.5e-24 Score=182.49 Aligned_cols=280 Identities=10% Similarity=0.070 Sum_probs=192.9
Q ss_pred EEEccCCCE-EEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccE-
Q 018248 12 LALNQDHGC-FATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRY- 88 (359)
Q Consensus 12 ~~~s~~g~~-l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~- 88 (359)
..|.+++.+ ++++. ++.|.+||.++++....... +.... .++++++++.+++++. .++.|.+||+.+++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~-~~~~s~dg~~l~~~~~---~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL---GYDFV-DTAITSDCSNVVVTSD---FCQTLVQIETQLEPPK 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC---CCCEE-EEEECSSSCEEEEEES---TTCEEEEEECSSSSCE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc---cCCcc-eEEEcCCCCEEEEEeC---CCCeEEEEECCCCcee
Confidence 356666666 45666 89999999998776544443 34555 8899999887777664 368999999999987
Q ss_pred EeeeccCcceeE-EEEecceeEEE---ec-C--eEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCee-
Q 018248 89 LGELSFRSEVKN-VRLRRDRIVVV---LN-Q--KVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQ- 160 (359)
Q Consensus 89 ~~~~~~~~~v~~-~~~~~~~~~~~---~d-~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~- 160 (359)
...+........ ++|+|++++++ .+ + .|.+||+.+++.+..+..+. ....++|+|+++.++++. ..++.
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~--~~~~~~ 152 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLILID--RSSANT 152 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEEEE--ETTTTE
T ss_pred EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEEEe--cCCCce
Confidence 666664444444 99999998776 33 3 89999999998888876544 347899999998744443 34566
Q ss_pred EEEEecCCee-e----EEeecccccccEEEEccCCcEEEEEe-CCCCeEEEEEcCCCcE---EEEeecCCCCcceEEEEe
Q 018248 161 VRVEDYGTKK-S----KYITAHASRIASIAMTLDGRFVATAS-SKGTLIRVFNTMDGSL---LQEMRRGAERAEIYSLAF 231 (359)
Q Consensus 161 v~~~~~~~~~-~----~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~~~~---~~~~~~~~~~~~i~~~~~ 231 (359)
+.+|+.+... + .........+..++|+|+|+++++++ .++. |.+||+.+++. +..+.. ...+..++|
T Consensus 153 i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~~~~~~~~~~~---~~~~~~~~~ 228 (331)
T 3u4y_A 153 VRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS-IGILETQNPENITLLNAVGT---NNLPGTIVV 228 (331)
T ss_dssp EEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE-EEEEECSSTTSCEEEEEEEC---SSCCCCEEE
T ss_pred EEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe-EEEEECCCCcccceeeeccC---CCCCceEEE
Confidence 8887765311 1 12223345678999999999665555 5777 99999999988 777764 356789999
Q ss_pred cCCCCEEEEEc-CCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcE
Q 018248 232 SSNAQWLAASS-DKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQ 310 (359)
Q Consensus 232 s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 310 (359)
+|||++|++++ .++.|.+||+.+++.. .+... ... +.....+....
T Consensus 229 spdg~~l~v~~~~~~~i~~~d~~~~~~~--------------------------~~~~~-----~~~--~~~~~~~~~~~ 275 (331)
T 3u4y_A 229 SRDGSTVYVLTESTVDVFNFNQLSGTLS--------------------------FVKSF-----GHG--LLIDPRPLFGA 275 (331)
T ss_dssp CTTSSEEEEECSSEEEEEEEETTTTEEE--------------------------EEEEE-----ECC--CCCCCGGGTTC
T ss_pred CCCCCEEEEEEcCCCEEEEEECCCCcee--------------------------eeccc-----ccc--cccCCCCcccc
Confidence 99999776655 5778999999886521 00000 000 00000011122
Q ss_pred EEeeecccCCEEEEEec-CCeEEEEEeCC
Q 018248 311 YLVGFGRQNNTIVIVGL-DGSYYKCEFDP 338 (359)
Q Consensus 311 ~~~~~s~~~~~l~~~~~-dg~i~v~~~~~ 338 (359)
..++|+||+++|++++. ++.|.+|++..
T Consensus 276 ~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 276 NQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred cceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 45899999999877766 66999999865
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=2.3e-24 Score=186.63 Aligned_cols=226 Identities=13% Similarity=0.064 Sum_probs=173.6
Q ss_pred CCEEEEec-C------CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEe
Q 018248 18 HGCFATGT-E------TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLG 90 (359)
Q Consensus 18 g~~l~~~~-d------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~ 90 (359)
+..++.++ + +.|++||++.... ..+. +|...+..++|+|+++.+++++... .+..|++||+.+++...
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~---~~l~-~~~~~v~~~~~Spdg~~la~~s~~~-~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQ---FVVH-RSPQPLMSPAWSPDGSKLAYVTFES-GRSALVIQTLANGAVRQ 217 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSC---EEEE-EESSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTTCCEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCC---EEEe-CCCCcceeeEEcCCCCEEEEEEecC-CCcEEEEEECCCCcEEE
Confidence 56666655 4 6899999985432 2232 5788999999999999999888422 13599999999998876
Q ss_pred eeccCcceeEEEEecceeEEE----e--cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCe--eEE
Q 018248 91 ELSFRSEVKNVRLRRDRIVVV----L--NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKG--QVR 162 (359)
Q Consensus 91 ~~~~~~~v~~~~~~~~~~~~~----~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~--~v~ 162 (359)
...+...+.+++|+|+|+.++ . +..|++||+.+++. ..+..+...+..++|+|+++.+++. +..++ .|+
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~--s~~~g~~~i~ 294 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFT--SDQAGRPQVY 294 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEE--ECTTSSCEEE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEE--ECCCCCcEEE
Confidence 555888999999999998666 2 34699999987765 4566667778889999998764333 32344 566
Q ss_pred EEecCCeeeEEeecccccccEEEEccCCcEEEEEeCC---CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEE
Q 018248 163 VEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSK---GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLA 239 (359)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 239 (359)
+|+..+.....+..+...+.+++|+|+|++|++++.+ .. |++||+.+++.. .+.. + ..+.+++|+|||++|+
T Consensus 295 ~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~-i~~~d~~~~~~~-~l~~--~-~~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 295 KVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH-IAKQDLATGGVQ-VLSS--T-FLDETPSLAPNGTMVI 369 (415)
T ss_dssp EEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEE-EEEEETTTCCEE-ECCC--S-SSCEEEEECTTSSEEE
T ss_pred EEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceE-EEEEECCCCCEE-EecC--C-CCcCCeEEcCCCCEEE
Confidence 6787776667777777889999999999999988764 46 999999988774 4543 3 2799999999999999
Q ss_pred EEcCCC---cEEEEEccCCC
Q 018248 240 ASSDKG---TVHVFGLKVDS 256 (359)
Q Consensus 240 ~~~~dg---~i~iw~~~~~~ 256 (359)
+++.++ .|++||+..+.
T Consensus 370 ~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EEEEETTEEEEEEEETTSCC
T ss_pred EEEcCCCccEEEEEECCCCc
Confidence 888776 79999987544
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=1.1e-23 Score=178.64 Aligned_cols=267 Identities=12% Similarity=0.060 Sum_probs=200.2
Q ss_pred CCceEEEEEccCCCEEEEec--------CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCe
Q 018248 6 PITIHHLALNQDHGCFATGT--------ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNK 77 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~--------d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~ 77 (359)
...+..++|+|+|+++++++ ++.|.+||.++++....... ......++++++++.++++.. .++.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~---~~~~ 112 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN----DLKPFGATINNTTQTLWFGNT---VNSA 112 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE----SSCCCSEEEETTTTEEEEEET---TTTE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec----CCCcceEEECCCCCEEEEEec---CCCE
Confidence 35678999999999998877 45799999998776544443 344677889999887776654 4689
Q ss_pred EEEEECCCccEEeeeccC-c---------ceeEEEEecceeEEE--e---cCeEEEEEcccceeeeeEeccCCCceeeee
Q 018248 78 VMIWDDHENRYLGELSFR-S---------EVKNVRLRRDRIVVV--L---NQKVYVYNFTDLKLVDQIETVVNPTGLCDV 142 (359)
Q Consensus 78 i~iwd~~~~~~~~~~~~~-~---------~v~~~~~~~~~~~~~--~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 142 (359)
|.+||..+++.+..+... . .+.++.|+|++..++ . ++.|.+||..+++.+..+..+......+++
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL 192 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence 999999999988887632 1 278899999987655 2 688999999999988888745555678899
Q ss_pred ecCCCccEEEecCCCCeeEEEEecCC-eeeEEeec----ccccccEEEEccCCcEEEEEeCC-CCeEEEEEcCCCcEEEE
Q 018248 143 SQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITA----HASRIASIAMTLDGRFVATASSK-GTLIRVFNTMDGSLLQE 216 (359)
Q Consensus 143 ~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~d-g~~i~iwd~~~~~~~~~ 216 (359)
+|+++.++++ ..++.+.+|+... +....+.. +...+..++|+|+++++++++.+ +. |.+||..+++.+..
T Consensus 193 s~dg~~l~~~---~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 193 DSEGKRLYTT---NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE-VLVVDTRNGNILAK 268 (353)
T ss_dssp ETTTTEEEEE---CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE-EEEEETTTCCEEEE
T ss_pred CCCCCEEEEE---cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE-EEEEECCCCcEEEE
Confidence 9998864443 2478899977654 44444443 45567789999999987777655 77 99999999999888
Q ss_pred eecCCCCcceEEEEecCCCCEEEEEc-CCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEe
Q 018248 217 MRRGAERAEIYSLAFSSNAQWLAASS-DKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFS 295 (359)
Q Consensus 217 ~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (359)
+..+. ...++|+|+|+++++++ .++.|.+||+.+++.. ..
T Consensus 269 ~~~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~---------------------------------~~-- 309 (353)
T 3vgz_A 269 VAAPE----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV---------------------------------KT-- 309 (353)
T ss_dssp EECSS----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE---------------------------------EE--
T ss_pred EEcCC----CceEEECCCCCEEEEEECCCCeEEEEECCCCeEE---------------------------------EE--
Confidence 87531 25699999999665554 7899999999876511 00
Q ss_pred cccceeEEeecCCcEEEeeecccCCEEEEEecCCe
Q 018248 296 SKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGS 330 (359)
Q Consensus 296 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 330 (359)
+.. ...+..++|+||+++|+++..++.
T Consensus 310 -------~~~-~~~~~~~~~s~dg~~l~v~~~~~~ 336 (353)
T 3vgz_A 310 -------FDT-PTHPNSLALSADGKTLYVSVKQKS 336 (353)
T ss_dssp -------EEC-CSEEEEEEECTTSCEEEEEEECCC
T ss_pred -------Eec-CCCCCeEEEcCCCCEEEEEEcccc
Confidence 111 135678999999998888887653
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=5.3e-24 Score=179.88 Aligned_cols=274 Identities=9% Similarity=0.125 Sum_probs=186.4
Q ss_pred EEEEec-CCceEEEEcCC-CcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC--Ccc--EEeeec
Q 018248 20 CFATGT-ETGFRVYLSDP-YKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH--ENR--YLGELS 93 (359)
Q Consensus 20 ~l~~~~-d~~i~iw~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~--~~~--~~~~~~ 93 (359)
++++++ ++.|++|+++. ++......+ .|...+..++++++++.+++++. .++.|.+|++. +++ .+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV--DVPGQVQPMVVSPDKRYLYVGVR---PEFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSCCCCEEECTTSSEEEEEET---TTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE--ecCCCCceEEECCCCCEEEEeec---CCCeEEEEEecCCCCceeeccccc
Confidence 344445 99999999963 322333333 36778888999999998887773 23899999987 554 344455
Q ss_pred cCcceeEEEEecceeEEE----ecCeEEEEEc---ccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEec
Q 018248 94 FRSEVKNVRLRRDRIVVV----LNQKVYVYNF---TDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDY 166 (359)
Q Consensus 94 ~~~~v~~~~~~~~~~~~~----~d~~i~i~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~ 166 (359)
....+..++|+|++..++ .++.|.+||+ ...+....+..+ ..+..++|+|+++.++++ +..++.|++|+.
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~--~~~~~~v~~~d~ 158 (343)
T 1ri6_A 82 LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVP--ALKQDRICLFTV 158 (343)
T ss_dssp CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEE--EGGGTEEEEEEE
T ss_pred cCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEe--cCCCCEEEEEEe
Confidence 445889999999998665 4789999999 444555555443 346778999998764333 335889999887
Q ss_pred CC-eeeE-----Eeec-ccccccEEEEccCCcEEEEEe-CCCCeEEEEEcCC--CcE--EEEeec---C-CCCcceEEEE
Q 018248 167 GT-KKSK-----YITA-HASRIASIAMTLDGRFVATAS-SKGTLIRVFNTMD--GSL--LQEMRR---G-AERAEIYSLA 230 (359)
Q Consensus 167 ~~-~~~~-----~~~~-~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~--~~~--~~~~~~---~-~~~~~i~~~~ 230 (359)
.. ..+. .+.. ....+..++|+|++++|++++ .++. |.+|++.. ++. ...+.. + .....+..++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~-i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS-VDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCcEEEEeeccccCccccccCCccceE
Confidence 65 3332 2222 234678899999999776555 7788 99999953 432 222221 1 1123677899
Q ss_pred ecCCCCEEE-EEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCc
Q 018248 231 FSSNAQWLA-ASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENV 309 (359)
Q Consensus 231 ~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (359)
|+|+|++|+ +...++.|++|++...... +..+. .+... +.
T Consensus 238 ~s~dg~~l~v~~~~~~~i~v~d~~~~~~~------------------------~~~~~--------------~~~~~-~~ 278 (343)
T 1ri6_A 238 ITPDGRHLYACDRTASLITVFSVSEDGSV------------------------LSKEG--------------FQPTE-TQ 278 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTSCC------------------------EEEEE--------------EEECS-SS
T ss_pred ECCCCCEEEEEecCCCEEEEEEEcCCCCc------------------------eEEee--------------eecCC-Cc
Confidence 999999877 4557899999999842210 00000 01111 23
Q ss_pred EEEeeecccCCEEEEEe-cCCeEEEEEeCCCCC
Q 018248 310 QYLVGFGRQNNTIVIVG-LDGSYYKCEFDPMKG 341 (359)
Q Consensus 310 v~~~~~s~~~~~l~~~~-~dg~i~v~~~~~~~~ 341 (359)
+..++|+|++++|++++ .++.+.+|+++++.+
T Consensus 279 ~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g 311 (343)
T 1ri6_A 279 PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQG 311 (343)
T ss_dssp CCCEEECTTSSEEEEECTTTCEEEEEEEETTTT
T ss_pred cceEEECCCCCEEEEecCCCCeEEEEEEcCCCc
Confidence 67899999999999888 589999999987543
No 134
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=5.2e-26 Score=195.77 Aligned_cols=216 Identities=14% Similarity=0.113 Sum_probs=145.9
Q ss_pred CCCCCceEEEEEcc--------CCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCC-EEEEEecCC
Q 018248 3 QPDPITIHHLALNQ--------DHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSN-IICLVNSGP 72 (359)
Q Consensus 3 ~~h~~~v~~~~~s~--------~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~~~~~~ 72 (359)
..|.+.|.+++|+| |+++||+|+ |++|+|||+.+...... .+ +|...+..++|+|++. .++.++
T Consensus 133 ~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~-~~--~~~~~v~~v~~~p~~~~~l~~~~--- 206 (393)
T 4gq1_A 133 SGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA-GY--PLSSPGISVQFRPSNPNQLIVGE--- 206 (393)
T ss_dssp TSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE-EE--ECSSCEEEEEEETTEEEEEEEEE---
T ss_pred CCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee-ec--CCCCCcEEEEECCCCCceEEecC---
Confidence 35899999999998 899999999 99999999986554432 22 5789999999998775 445444
Q ss_pred CCCCeEEEEECCCccEEeee--------------------------ccCcceeEEEEe-cceeEEE---ecCeEEEEEcc
Q 018248 73 HQSNKVMIWDDHENRYLGEL--------------------------SFRSEVKNVRLR-RDRIVVV---LNQKVYVYNFT 122 (359)
Q Consensus 73 ~~d~~i~iwd~~~~~~~~~~--------------------------~~~~~v~~~~~~-~~~~~~~---~d~~i~i~d~~ 122 (359)
.|++|++||+.+++..... .|...+.++.|. +++..++ .|+++++||+.
T Consensus 207 -~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 207 -RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF 285 (393)
T ss_dssp -TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-
T ss_pred -CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc
Confidence 6899999999887544322 145678888887 7887777 89999999998
Q ss_pred cceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEcc-CCcEEEEEeCCCC
Q 018248 123 DLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTL-DGRFVATASSKGT 201 (359)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~ 201 (359)
.++....+..+...+..+.+.|+... ...+...+..+.+.+ ++.++++|+.||.
T Consensus 286 ~~~~~~~l~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~ 340 (393)
T 4gq1_A 286 ANNDYNEISDSTMKLGPKNLLPNVQG-------------------------ISLFPSLLGACPHPRYMDYFATAHSQHGL 340 (393)
T ss_dssp ------------------CCSCSEEE-------------------------ECSSCCSSCCEECSSCTTEEEEEETTTTE
T ss_pred cCCCCceEeeecCccccEEEcccccc-------------------------ccccCcceeEEEccCCCCEEEEEECCCCE
Confidence 88777666665555554444443221 111222222333323 4557788889999
Q ss_pred eEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 018248 202 LIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 254 (359)
|++||+.+++.+..+.. |..+|.+++|+|||++||+++.+| +.+|++..
T Consensus 341 -V~lwd~~~~~~~~~~~~--~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 341 -IQLINTYEKDSNSIPIQ--LGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp -EEEEETTCTTCCEEEEE--CSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred -EEEEECCCCcEEEEecC--CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 99999999988877766 567999999999999999998776 77777643
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=2.1e-25 Score=207.19 Aligned_cols=288 Identities=8% Similarity=0.027 Sum_probs=197.4
Q ss_pred CCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCC---ceeEEEEeccCCEEEEEecCCC-----CCCe
Q 018248 6 PITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRG---GTQLVSMLFRSNIICLVNSGPH-----QSNK 77 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~~~~-----~d~~ 77 (359)
...+.+++|+|||++++++.|+.|++||+++++.... +. +|.. .+..++|+|+++.+++++.... .++.
T Consensus 16 ~~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~--~~-~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 16 KIHDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVL--IE-GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEE--EC-TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred cccccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEE--ec-cccccccccceEEECCCCCEEEEEecCccceeecceee
Confidence 3457889999999988774499999999998766533 32 3443 4889999999999988874221 2488
Q ss_pred EEEEECCCccEEeeec----cCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeEeccCCCc--------------
Q 018248 78 VMIWDDHENRYLGELS----FRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETVVNPT-------------- 137 (359)
Q Consensus 78 i~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~-------------- 137 (359)
+.+||+.+++. ..+. +...+..++|+|||+.++ .++.|++||+.+++.......+...+
T Consensus 93 i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 93 YVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence 99999998876 3332 334588999999998887 78999999998877665554433322
Q ss_pred ----eeeeeecCCCccEEEecCC-------------------------------CCeeEEEEecCCee-eEEeecc----
Q 018248 138 ----GLCDVSQNAGPMVMACPGL-------------------------------LKGQVRVEDYGTKK-SKYITAH---- 177 (359)
Q Consensus 138 ----~~~~~~~~~~~~~l~~~g~-------------------------------~d~~v~~~~~~~~~-~~~~~~~---- 177 (359)
..++|+|+++.++.+.... .+..|++|+..+.. ...+..+
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 5789999998744433110 02267788877654 3555543
Q ss_pred --cccccEEEEccCCcEEEEEeCC----CCeEEEEEcCCCcEEEEeecCCCCcce----EEEEecCCCCEEEE--EcCCC
Q 018248 178 --ASRIASIAMTLDGRFVATASSK----GTLIRVFNTMDGSLLQEMRRGAERAEI----YSLAFSSNAQWLAA--SSDKG 245 (359)
Q Consensus 178 --~~~i~~~~~s~~~~~l~~~~~d----g~~i~iwd~~~~~~~~~~~~~~~~~~i----~~~~~s~~~~~l~~--~~~dg 245 (359)
...+..++|+|||++|++.+.. .. |++||+.+++....+..+ +...+ ..++|||||+.|+. ...++
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 329 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSI-LTLCDATTGVCTKKHEDE-SEAWLHRQNEEPVFSKDGRKFFFIRAIPQG 329 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEE-EEEEETTTCCEEEEEEEE-CSSCCCCCCCCCEECTTSCSEEEEEEECCS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEE-EEEEeCCCCcceEEEEec-cCCEEeccCCCceEcCCCCeEEEEEecccC
Confidence 5678999999999988776532 45 999999999877665432 23333 37899999997765 44566
Q ss_pred ------cEEEEEccCCCC---CCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeec
Q 018248 246 ------TVHVFGLKVDSG---SPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFG 316 (359)
Q Consensus 246 ------~i~iw~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 316 (359)
.|.+||+..+.. .. .+. .. +......++|+
T Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~-----------------------------~l~---~~---------~~~~~~~~~~s 368 (723)
T 1xfd_A 330 GRGKFYHITVSSSQPNSSNDNIQ-----------------------------SIT---SG---------DWDVTKILAYD 368 (723)
T ss_dssp SSSCEEEEEEECSSCCSSSCCCC-----------------------------BSC---CS---------SSCEEEEEEEE
T ss_pred CCcceeEEEEEeccCCCCcccee-----------------------------Eee---cC---------CeEEEeeeEEc
Confidence 455666322221 10 000 00 01122346899
Q ss_pred ccCCEEEEEecC---CeEEEEEeCCCC
Q 018248 317 RQNNTIVIVGLD---GSYYKCEFDPMK 340 (359)
Q Consensus 317 ~~~~~l~~~~~d---g~i~v~~~~~~~ 340 (359)
|||+.|+..+.+ +.+++|.++...
T Consensus 369 pdg~~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 369 EKGNKIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp TTTTEEEEEESSSCTTCCEEEEECSST
T ss_pred CCCCEEEEEEcCCCCcceEEEEEeCCC
Confidence 999999877665 889999998643
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=7.6e-24 Score=178.44 Aligned_cols=261 Identities=11% Similarity=0.070 Sum_probs=189.7
Q ss_pred CEEEEec-CCceEEEEcCCCcceeeeecccCCCC-ceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCc
Q 018248 19 GCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRG-GTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRS 96 (359)
Q Consensus 19 ~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~ 96 (359)
++|++++ ++.|++||+.+++......+ ++.. .+..++++++++.++++.. .++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~v~~~---~~~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITI--ADAGPTPMVPMVAPGGRIAYATVN---KSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC--TTCTTCCCCEEECTTSSEEEEEET---TTTEEEEEETTTCCEEEEEECCB
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEc--CCCCCCccceEEcCCCCEEEEEeC---CCCeEEEEECCCCCeEeeEEcCC
Confidence 4677777 99999999998766544443 2221 4678889999887766654 46899999999999888776433
Q ss_pred ------ceeEEEEecceeEEE-e--------------cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecC
Q 018248 97 ------EVKNVRLRRDRIVVV-L--------------NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 97 ------~v~~~~~~~~~~~~~-~--------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 155 (359)
.+..++|+|+++.++ . ++.|.+||+.+++.+..+... ..+..++++|+++.++++
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~--- 152 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-RQITMLAWARDGSKLYGL--- 152 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-SSCCCEEECTTSSCEEEE---
T ss_pred cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC-CCcceeEECCCCCEEEEe---
Confidence 788999999997666 3 489999999988888777653 345678899998873332
Q ss_pred CCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcEEEEEeCCC------------------------CeEEEEEcCC
Q 018248 156 LLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRFVATASSKG------------------------TLIRVFNTMD 210 (359)
Q Consensus 156 ~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg------------------------~~i~iwd~~~ 210 (359)
++.|++|+... +....+..+. ....+.|+|+++.++..+..+ . |.+||+.+
T Consensus 153 --~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~d~~~ 228 (337)
T 1pby_B 153 --GRDLHVMDPEAGTLVEDKPIQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG-LLTMDLET 228 (337)
T ss_dssp --SSSEEEEETTTTEEEEEECSTT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE-EEEEETTT
T ss_pred --CCeEEEEECCCCcEeeeeeccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccc-eEEEeCCC
Confidence 56799988765 4444444333 112337899998776554433 3 68999999
Q ss_pred CcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeec
Q 018248 211 GSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVL 290 (359)
Q Consensus 211 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (359)
++.. .+....+...+.+++|+|||++|+++ ++.|++||+++++..
T Consensus 229 ~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~-------------------------------- 273 (337)
T 1pby_B 229 GEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI-------------------------------- 273 (337)
T ss_dssp CCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE--------------------------------
T ss_pred CCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCc--------------------------------
Confidence 8875 33332255678899999999999888 689999999876511
Q ss_pred ceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 291 PKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
.. +.. ...+..++|+||+++|++++.++.|++|++..
T Consensus 274 -~~---------~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 274 -KR---------VPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp -EE---------EEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred -ce---------ecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 00 111 12456899999999999999999999998765
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=4.6e-24 Score=176.25 Aligned_cols=248 Identities=9% Similarity=0.035 Sum_probs=183.0
Q ss_pred CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC-ccEEeeec-c-CcceeEEE
Q 018248 26 ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE-NRYLGELS-F-RSEVKNVR 102 (359)
Q Consensus 26 d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~-~~~~~~~~-~-~~~v~~~~ 102 (359)
++.|++||+.+++... .. .|...+..++|+++++.+++.+ ++.|++||+.+ ++...... + ...+.+++
T Consensus 21 ~~~i~~~d~~~~~~~~--~~--~~~~~v~~~~~spdg~~l~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRV--VW--QTPELFEAPNWSPDGKYLLLNS-----EGLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp CEEEEEEETTTTEEEE--EE--EESSCCEEEEECTTSSEEEEEE-----TTEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred ceeEEEEeCCCCceee--ec--cCCcceEeeEECCCCCEEEEEc-----CCeEEEEeCCCCCCceEeccccccccccceE
Confidence 7889999998765442 22 4688899999999999888765 58999999999 87776665 3 47789999
Q ss_pred EecceeEEE--e-----cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEe--cCCeeeEE
Q 018248 103 LRRDRIVVV--L-----NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVED--YGTKKSKY 173 (359)
Q Consensus 103 ~~~~~~~~~--~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~--~~~~~~~~ 173 (359)
|+|+++.++ . ...|..+++.+++ ...+..+ ..+..++|+|+++.++++ +..++.+++|. ........
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~--~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYC--GIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEE--EEETTEEEEEEEETTTCCEEE
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEE--ECCCCceEEEEEECCCCcceE
Confidence 999998887 2 2355555554444 3344333 346778899998764333 44678888876 44556677
Q ss_pred eecccccccEEEEccCCcEEEEEe-CCCCeEEEEEcC-CCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC-------
Q 018248 174 ITAHASRIASIAMTLDGRFVATAS-SKGTLIRVFNTM-DGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK------- 244 (359)
Q Consensus 174 ~~~~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------- 244 (359)
+..+...+.+++|+|++++|++++ .++. +++|++. .+..+..+.. +...+..++|+|+|++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQ-MQIWRVRVDGSSVERITD--SAYGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSS-CEEEEEETTSSCEEECCC--CSEEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred cccCCCccccceECCCCCEEEEEecCCCC-ccEEEECCCCCCcEEEec--CCcccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 777888999999999999887766 5888 9999986 5556666665 55789999999999999888765
Q ss_pred ----CcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCC
Q 018248 245 ----GTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNN 320 (359)
Q Consensus 245 ----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 320 (359)
+.|++||+++++... ...+..+.+.+..++|+||++
T Consensus 245 ~~~~~~l~~~d~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~spdg~ 284 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVET----------------------------------------LFDLFGGQGTMNSPNWSPDGD 284 (297)
T ss_dssp SSEEEEEEEEETTSCSCEE----------------------------------------EEEEEESTTTSCSCCBCTTSS
T ss_pred ccCceEEEEEecCCCCcee----------------------------------------eeccCCCCcccccceECCCCC
Confidence 569999998765210 001122345678899999999
Q ss_pred EEEEEecCC
Q 018248 321 TIVIVGLDG 329 (359)
Q Consensus 321 ~l~~~~~dg 329 (359)
.|++++.+.
T Consensus 285 ~l~~~~~~~ 293 (297)
T 2ojh_A 285 EFAYVRYFP 293 (297)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 999888754
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=2e-23 Score=193.45 Aligned_cols=275 Identities=11% Similarity=0.044 Sum_probs=195.6
Q ss_pred CceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC-
Q 018248 7 ITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE- 85 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~- 85 (359)
..|.+++|||| +.++.+.++.|++||+.+++... .. .+...+..++|+|+++.++++. ++.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~--l~--~~~~~~~~~~~SpdG~~la~~~-----~~~i~v~~~~~~ 151 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTY--LF--DTNEETASLDFSPVGDRVAYVR-----NHNLYIARGGKL 151 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEEE--EE--CCTTCCTTCEECTTSSEEEEEE-----TTEEEEEECBCT
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCCceEE--cc--CCcccccCCcCCCCCCEEEEEE-----CCeEEEEecCcc
Confidence 56999999999 77777778999999998765432 22 3466788889999999988854 69999999988
Q ss_pred ----ccEEeeec-cCcc--------------eeEEEEecceeEEE--e-c------------------------------
Q 018248 86 ----NRYLGELS-FRSE--------------VKNVRLRRDRIVVV--L-N------------------------------ 113 (359)
Q Consensus 86 ----~~~~~~~~-~~~~--------------v~~~~~~~~~~~~~--~-d------------------------------ 113 (359)
++...... .... +.++.|+|||+.++ . |
T Consensus 152 ~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 152 GEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp TSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred cccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 77665544 2222 58999999998887 2 1
Q ss_pred ---CeEEEEEcccceeeeeEe--ccCCCceeeeeecCCCccEEEecCC--CCeeEEEEecCCe-eeEEeec--ccc---c
Q 018248 114 ---QKVYVYNFTDLKLVDQIE--TVVNPTGLCDVSQNAGPMVMACPGL--LKGQVRVEDYGTK-KSKYITA--HAS---R 180 (359)
Q Consensus 114 ---~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~g~--~d~~v~~~~~~~~-~~~~~~~--~~~---~ 180 (359)
..|++||+.+++...... .+...+..++|+|+++.++++.... ....|++|+.... ....+.. +.. .
T Consensus 232 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp CCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred CCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 579999998887644432 2445567899999998644433111 1247888887765 5444432 222 2
Q ss_pred ccEEEEcc--CCcEEEEEeCCCCeEEEEEcC-CCcEEEEeecCCCCcceEE-EEecCCCCEEEEEcC-CC----cEEEEE
Q 018248 181 IASIAMTL--DGRFVATASSKGTLIRVFNTM-DGSLLQEMRRGAERAEIYS-LAFSSNAQWLAASSD-KG----TVHVFG 251 (359)
Q Consensus 181 i~~~~~s~--~~~~l~~~~~dg~~i~iwd~~-~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~-dg----~i~iw~ 251 (359)
+..++|+| ||+++++++.++. ++||++. +++.+..+.. +...+.+ ++|+|+|+.|+.++. ++ .|..||
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g~-~~l~~~~~~~~~~~~l~~--~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDGW-NHLYLYDTTGRLIRQVTK--GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTSS-CEEEEEETTSCEEEECCC--SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEE
T ss_pred cCCceeecCCCCEEEEEEccCCc-cEEEEEECCCCEEEecCC--CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEE
Confidence 46789999 9999999999998 9999886 6777777765 4556776 799999998765554 44 455556
Q ss_pred ccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecC---
Q 018248 252 LKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLD--- 328 (359)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--- 328 (359)
+.++... . + .+...+..++|+|||++|+..+.+
T Consensus 389 ~~~~~~~----------------------------------~---------l-~~~~~~~~~~~spdg~~l~~~~~~~~~ 424 (706)
T 2z3z_A 389 IKGGKTK----------------------------------D---------L-TPESGMHRTQLSPDGSAIIDIFQSPTV 424 (706)
T ss_dssp TTCCCCE----------------------------------E---------S-CCSSSEEEEEECTTSSEEEEEEECSSC
T ss_pred cCCCCce----------------------------------e---------c-cCCCceEEEEECCCCCEEEEEecCCCC
Confidence 5554311 0 0 022356789999999998877654
Q ss_pred -CeEEEEEeCC
Q 018248 329 -GSYYKCEFDP 338 (359)
Q Consensus 329 -g~i~v~~~~~ 338 (359)
+.+++|+++.
T Consensus 425 p~~i~l~d~~~ 435 (706)
T 2z3z_A 425 PRKVTVTNIGK 435 (706)
T ss_dssp SCEEEEEESSS
T ss_pred CcEEEEEECCC
Confidence 5699998764
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.93 E-value=3.6e-24 Score=193.93 Aligned_cols=268 Identities=10% Similarity=0.026 Sum_probs=186.6
Q ss_pred CCceEEEEEccCCCEEEEec--CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecC-CCCCCeEEE--
Q 018248 6 PITIHHLALNQDHGCFATGT--ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSG-PHQSNKVMI-- 80 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~-~~~d~~i~i-- 80 (359)
..+|++++|+|||+.||+++ |++++||++++++.. .+...+...+..+.|+++ .+++.+.. . .+....+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~---~lt~~~~~~~~~~~~spd--~~l~~~~~~~-g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV---KLNREPINSVLDPHYGVG--RVILVRDVSK-GAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE---ECCSSCCSEECEECTTCS--EEEEEEECST-TSCCEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE---eeecccccccccccCCCC--eEEEEeccCC-CCcceEEEE
Confidence 45799999999999999876 899999998654332 222123357788888876 44443321 1 2344455
Q ss_pred EEC-CCccEEeeeccCcceeEEEEeccee--EEE--ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecC
Q 018248 81 WDD-HENRYLGELSFRSEVKNVRLRRDRI--VVV--LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 81 wd~-~~~~~~~~~~~~~~v~~~~~~~~~~--~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 155 (359)
++. ..+... .+.....+...+|+|++. .++ .++.+.+||+.+++.......+. ..++++|+++. +++ +
T Consensus 95 ~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~--la~-~ 167 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDL--IAG-L 167 (582)
T ss_dssp EETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTE--EEE-E
T ss_pred EeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCE--EEE-E
Confidence 454 123322 444333344667888774 344 55666699998887655544332 67889999987 443 2
Q ss_pred CCC----eeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCC--CeEEEEEcCCCcEEEEeecCCCCcceEEE
Q 018248 156 LLK----GQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKG--TLIRVFNTMDGSLLQEMRRGAERAEIYSL 229 (359)
Q Consensus 156 ~~d----~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~~i~iwd~~~~~~~~~~~~~~~~~~i~~~ 229 (359)
+.+ +.|++|+..+...+.+..|...+..++|||||+.|+++..++ . |++||+.+++.. .+.. +...+..+
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~-i~~~d~~~~~~~-~~~~--~~~~~~~~ 243 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREAR-LVTVDPRDGSVE-DLEL--PSKDFSSY 243 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEE-EEEECTTTCCEE-ECCC--SCSHHHHH
T ss_pred EEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeE-EEEEcCCCCcEE-EccC--CCcChhhh
Confidence 223 678889887777778888989999999999999999888888 7 999999998877 5544 44556666
Q ss_pred E--------ecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEeccccee
Q 018248 230 A--------FSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMA 301 (359)
Q Consensus 230 ~--------~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (359)
+ |+|||.++++++.++.+++|++ ++..
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~------------------------------------------- 278 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFID--GERV------------------------------------------- 278 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEE-------------------------------------------
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCee-------------------------------------------
Confidence 6 9999999999999999999999 3310
Q ss_pred EEeecCCcEEEeeecccCCEEEEEecCCe-EEEEEeCC
Q 018248 302 QFRLPENVQYLVGFGRQNNTIVIVGLDGS-YYKCEFDP 338 (359)
Q Consensus 302 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~v~~~~~ 338 (359)
+.+.+.+..++|+ |++.+++++.+.. -.+|.++.
T Consensus 279 --~~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 279 --EAPQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp --CCCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred --ccCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 0123466789999 9999988887644 34455554
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=8.7e-24 Score=195.81 Aligned_cols=235 Identities=11% Similarity=0.080 Sum_probs=164.4
Q ss_pred ceEEEEEccCCCEEEEec-CCceEEEEcCCCcc--eeeeeccc-------------CCCCceeEEEEeccCCEEEEEecC
Q 018248 8 TIHHLALNQDHGCFATGT-ETGFRVYLSDPYKP--IMRRDFDR-------------NPRGGTQLVSMLFRSNIICLVNSG 71 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~--~~~~~~~~-------------~h~~~v~~~~~~~~~~~~~~~~~~ 71 (359)
.+..+.|. |..+++++ ++ | +||+.+++. ........ .+...+..++++++ +.+++..
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-- 99 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-- 99 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE--
T ss_pred cCCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE--
Confidence 35567788 55666666 66 8 999998766 33222100 01146888999998 6666654
Q ss_pred CCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE--ecCeEEEEEccc-----ceeeeeEeccCCC--------
Q 018248 72 PHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV--LNQKVYVYNFTD-----LKLVDQIETVVNP-------- 136 (359)
Q Consensus 72 ~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~-----~~~~~~~~~~~~~-------- 136 (359)
++.|++||+.+++......+...+.+++|+|+|+.++ .++.|++||+.+ ++.......+...
T Consensus 100 ---~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 100 ---QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp ---TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred ---CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 5999999999988776666777899999999998887 899999999987 7655443333222
Q ss_pred ------ceeeeeecCCCccEEEec------------------------------CCCCeeEEEEecCCeeeEEee---cc
Q 018248 137 ------TGLCDVSQNAGPMVMACP------------------------------GLLKGQVRVEDYGTKKSKYIT---AH 177 (359)
Q Consensus 137 ------~~~~~~~~~~~~~~l~~~------------------------------g~~d~~v~~~~~~~~~~~~~~---~~ 177 (359)
+..++|+|+++.++++.. ...+..|++|+..+.....+. .|
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 367899999987443320 013467888888775544443 46
Q ss_pred cccccEEEEccCCcEEEEEeCCC-----CeEEEEEcCCCcEEEEeecCCCCc---ceEEEEecC--CCCEEEEEcCCCcE
Q 018248 178 ASRIASIAMTLDGRFVATASSKG-----TLIRVFNTMDGSLLQEMRRGAERA---EIYSLAFSS--NAQWLAASSDKGTV 247 (359)
Q Consensus 178 ~~~i~~~~~s~~~~~l~~~~~dg-----~~i~iwd~~~~~~~~~~~~~~~~~---~i~~~~~s~--~~~~l~~~~~dg~i 247 (359)
...+.+++|+|||++|++++.++ . |++||+.+++....+....+.. .+.+++|+| ||++|++++.|+.+
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~-v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~ 335 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECK-VNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWN 335 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEE-EEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSC
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeE-EEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCcc
Confidence 67789999999999999887765 7 9999999984443333211222 246789999 99999999999999
Q ss_pred EEEEcc
Q 018248 248 HVFGLK 253 (359)
Q Consensus 248 ~iw~~~ 253 (359)
+||.++
T Consensus 336 ~l~~~~ 341 (706)
T 2z3z_A 336 HLYLYD 341 (706)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999987
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=1.9e-23 Score=194.58 Aligned_cols=275 Identities=9% Similarity=0.044 Sum_probs=195.9
Q ss_pred CceEEEEEccCCCEEEEecCCceEEEEcCCCc--ceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 7 ITIHHLALNQDHGCFATGTETGFRVYLSDPYK--PIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
..|.+++|||||++|++++++.|++|+++++. .. ..+. .|...+..++|+|+++.+++++ ++.|++||+.
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~--~~l~-~~~~~~~~~~~SPDG~~la~~~-----~~~i~~~d~~ 180 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAV--RQLT-HGEGFATDAKLSPKGGFVSFIR-----GRNLWVIDLA 180 (741)
T ss_dssp EESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSC--CBCC-CSSSCEEEEEECTTSSEEEEEE-----TTEEEEEETT
T ss_pred cCcceeEECCCCCEEEEEeCCcEEEEECCCCCcceE--EEcc-cCCcccccccCCCCCCEEEEEe-----CCcEEEEecC
Confidence 34889999999999999999999999998762 22 2232 4677899999999999998887 4699999999
Q ss_pred CccEEeeec-cCcc----------------eeEEEEecceeEEE---ecC------------------------------
Q 018248 85 ENRYLGELS-FRSE----------------VKNVRLRRDRIVVV---LNQ------------------------------ 114 (359)
Q Consensus 85 ~~~~~~~~~-~~~~----------------v~~~~~~~~~~~~~---~d~------------------------------ 114 (359)
+++...... +... +..+.|+|||+.++ .|+
T Consensus 181 ~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 181 SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 887765544 2221 47899999998777 444
Q ss_pred ---eEEEEEccc-ceeeeeEe--ccCCCceeeeeecCCCccEEEec--CCCCeeEEEEecCCeee-EEeecccc----cc
Q 018248 115 ---KVYVYNFTD-LKLVDQIE--TVVNPTGLCDVSQNAGPMVMACP--GLLKGQVRVEDYGTKKS-KYITAHAS----RI 181 (359)
Q Consensus 115 ---~i~i~d~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~--g~~d~~v~~~~~~~~~~-~~~~~~~~----~i 181 (359)
.|++||+.+ ++...... .+...+..++| |+++.+++... +..+..|++|+...... ..+..+.. .+
T Consensus 261 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 339 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLH 339 (741)
T ss_dssp CEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcC
Confidence 889999987 76543332 24455677899 99887544432 23467788888765443 33444432 45
Q ss_pred cEEEEccCCcEEEEEeCCCCeEEEEEcC-CCcEEEEeecCCCCcceEEE-EecCCCCEEE-EEcCCC--cEEEEEccCCC
Q 018248 182 ASIAMTLDGRFVATASSKGTLIRVFNTM-DGSLLQEMRRGAERAEIYSL-AFSSNAQWLA-ASSDKG--TVHVFGLKVDS 256 (359)
Q Consensus 182 ~~~~~s~~~~~l~~~~~dg~~i~iwd~~-~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~-~~~~dg--~i~iw~~~~~~ 256 (359)
..++|+|||+++++++.+|. ++||.+. +++ ...+.. +...+..+ .|+|+|+.|+ +++.++ .++||++....
T Consensus 340 ~~~~~spdg~~~~~~~~~g~-~~l~~~~~~~~-~~~l~~--~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g 415 (741)
T 2ecf_A 340 NSLRFLDDGSILWSSERTGF-QHLYRIDSKGK-AAALTH--GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG 415 (741)
T ss_dssp SCCEECTTSCEEEEECTTSS-CEEEEECSSSC-EEESCC--SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC
T ss_pred CceEECCCCeEEEEecCCCc-cEEEEEcCCCC-eeeeee--cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC
Confidence 78999999999999999998 8888775 455 666665 45678887 5999999775 455555 89999997533
Q ss_pred CCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecC----CeEE
Q 018248 257 GSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLD----GSYY 332 (359)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~ 332 (359)
... +. +.. .+.+..++|+||++.|+....+ +.++
T Consensus 416 ~~~--------------------------------~~---------l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~ 453 (741)
T 2ecf_A 416 GQP--------------------------------QR---------LSK-APGMHSASFARNASVYVDSWSNNSTPPQIE 453 (741)
T ss_dssp CCC--------------------------------EE---------CCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEE
T ss_pred CCe--------------------------------ee---------ccc-CCCceEEEECCCCCEEEEEecCCCCCCeEE
Confidence 110 00 000 2345689999999998877654 4677
Q ss_pred EEEe
Q 018248 333 KCEF 336 (359)
Q Consensus 333 v~~~ 336 (359)
+++.
T Consensus 454 l~~~ 457 (741)
T 2ecf_A 454 LFRA 457 (741)
T ss_dssp EEET
T ss_pred EEEc
Confidence 7765
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=2.6e-23 Score=200.15 Aligned_cols=272 Identities=10% Similarity=0.099 Sum_probs=203.8
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
.|...+.+++|+++ .+++++. ++.++||.++...... ..+. .|. .+...+|+++++.+++.. ++.|++|+
T Consensus 201 ~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~-~~l~-~~~-~~~~~~~SpDG~~la~~~-----~~~i~~~d 271 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL-RKHT-SFT-DYYPRHLNTDGRRILFSK-----GGSIYIFN 271 (1045)
T ss_dssp CCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC-EECC-CCC-SSCEEEEEESSSCEEEEE-----TTEEEEEC
T ss_pred CCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc-eEec-CCC-CcceeeEcCCCCEEEEEe-----CCEEEEec
Confidence 47788999999998 5666666 8899999876422221 2232 233 456779999999888764 68999999
Q ss_pred CCCccEEeeecc------------CcceeEEEEe-cceeEEE--ecCeEEEEEcccceeeeeEeccCC-CceeeeeecCC
Q 018248 83 DHENRYLGELSF------------RSEVKNVRLR-RDRIVVV--LNQKVYVYNFTDLKLVDQIETVVN-PTGLCDVSQNA 146 (359)
Q Consensus 83 ~~~~~~~~~~~~------------~~~v~~~~~~-~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~ 146 (359)
+...+. ..+.. ...+.+++|+ |+|+.++ .++.|++|++.+++... +..+.. .+..++|+ ++
T Consensus 272 ~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg 348 (1045)
T 1k32_A 272 PDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TK 348 (1045)
T ss_dssp TTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SE
T ss_pred CCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CC
Confidence 854433 34432 2368999999 9998777 88999999997776443 444555 66778888 66
Q ss_pred CccEEEecCCCCeeEE-EEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcc
Q 018248 147 GPMVMACPGLLKGQVR-VEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAE 225 (359)
Q Consensus 147 ~~~~l~~~g~~d~~v~-~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~ 225 (359)
+. +++.+ .++.+. +|+..+.....+..|...+..++|+|||++|++++.++. |++||+.+++....+.. |...
T Consensus 349 ~~--l~~~s-~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~-v~~~d~~tg~~~~~~~~--~~~~ 422 (1045)
T 1k32_A 349 VA--FIHGT-REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFE-IMTVDLETGKPTVIERS--REAM 422 (1045)
T ss_dssp EE--EEEEE-TTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--SSSC
T ss_pred Ce--EEEEE-CCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCe-EEEEECCCCceEEeccC--CCCC
Confidence 65 44322 377888 888877766667778889999999999999999999999 99999999988777755 6678
Q ss_pred eEEEEecCCCCEEEEEcCCC----------cEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEe
Q 018248 226 IYSLAFSSNAQWLAASSDKG----------TVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFS 295 (359)
Q Consensus 226 i~~~~~s~~~~~l~~~~~dg----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (359)
+.+++|||||++|++++.++ .|++||+.+++..
T Consensus 423 v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~------------------------------------- 465 (1045)
T 1k32_A 423 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF------------------------------------- 465 (1045)
T ss_dssp CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE-------------------------------------
T ss_pred ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEE-------------------------------------
Confidence 89999999999998887654 8999999875410
Q ss_pred cccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEe
Q 018248 296 SKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 296 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~ 336 (359)
.+..+...+..++|+|||+.|++++.++...+|..
T Consensus 466 ------~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 466 ------AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp ------ECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred ------EeeCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 01112345667899999999999999887777753
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=4.5e-22 Score=168.48 Aligned_cols=273 Identities=13% Similarity=0.146 Sum_probs=176.7
Q ss_pred CCceEEEEcCC--CcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc--EEeeec-cCcceeE
Q 018248 26 ETGFRVYLSDP--YKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR--YLGELS-FRSEVKN 100 (359)
Q Consensus 26 d~~i~iw~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~--~~~~~~-~~~~v~~ 100 (359)
++.|.+|.++. ++....... .+......++++++++ +++++... .++.|.+|++.+++ .+..+. +...+..
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~--~~~~~p~~~a~spdg~-l~~~~~~~-~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLL--AATQNPTYLALSAKDC-LYSVDKED-DEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEE--EECSCCCCEEECTTCE-EEEEEEET-TEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred CCCEEEEEEcCCCCeEEEeeee--eccCCcceEEEccCCe-EEEEEecC-CCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 45688888764 332222222 3456677789999888 55555311 36899999997665 333433 6678899
Q ss_pred EEEecceeEEE----ecCeEEEEEcc-cc--eeeeeEeccC---------CCceeeeeecCCCccEEEecCCCCeeEEEE
Q 018248 101 VRLRRDRIVVV----LNQKVYVYNFT-DL--KLVDQIETVV---------NPTGLCDVSQNAGPMVMACPGLLKGQVRVE 164 (359)
Q Consensus 101 ~~~~~~~~~~~----~d~~i~i~d~~-~~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~ 164 (359)
++|+|++++++ .++.|.+|++. ++ +.+..+.... ..+..++++|+++ + +++ +..++.|.+|
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l-~v~-~~~~~~v~~~ 167 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-L-AVI-DLGSDKVYVY 167 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-E-EEE-ETTTTEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-E-EEE-eCCCCEEEEE
Confidence 99999998666 46899999995 22 3333332211 1255689999988 3 343 4457889998
Q ss_pred ecC-CeeeE---Eeecc-cccccEEEEccCCcEEEEE-eCCCCeEEEEEcCC--CcE--EEEeecCCC----CcceEEEE
Q 018248 165 DYG-TKKSK---YITAH-ASRIASIAMTLDGRFVATA-SSKGTLIRVFNTMD--GSL--LQEMRRGAE----RAEIYSLA 230 (359)
Q Consensus 165 ~~~-~~~~~---~~~~~-~~~i~~~~~s~~~~~l~~~-~~dg~~i~iwd~~~--~~~--~~~~~~~~~----~~~i~~~~ 230 (359)
+.. ...+. .+..+ ...+..++|+|||++|+++ ..++. |.+|++.. ++. +..+..... ...+..++
T Consensus 168 ~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (347)
T 3hfq_A 168 NVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQ-IASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIR 246 (347)
T ss_dssp EECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEE
T ss_pred EECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEE
Confidence 876 22222 22222 2357789999999977665 45677 99999874 543 223322111 13588999
Q ss_pred ecCCCCEEE-EEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCc
Q 018248 231 FSSNAQWLA-ASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENV 309 (359)
Q Consensus 231 ~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (359)
|+|||++|+ +...++.|.+|++..... +..+ ..+..+...
T Consensus 247 ~spdG~~l~v~~~~~~~v~v~~~~~~g~-------------------------~~~~--------------~~~~~~~~~ 287 (347)
T 3hfq_A 247 LSHDGHFLYVSNRGYNTLAVFAVTADGH-------------------------LTLI--------------QQISTEGDF 287 (347)
T ss_dssp ECTTSCEEEEEEETTTEEEEEEECGGGC-------------------------EEEE--------------EEEECSSSC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEECCCCc-------------------------EEEe--------------EEEecCCCC
Confidence 999999874 555689999999974321 0000 011222334
Q ss_pred EEEeeecccCCEEEEEec-CCeEEEEEeCCCCCCceEE
Q 018248 310 QYLVGFGRQNNTIVIVGL-DGSYYKCEFDPMKGGEMHQ 346 (359)
Q Consensus 310 v~~~~~s~~~~~l~~~~~-dg~i~v~~~~~~~~~~~~~ 346 (359)
+..++|+|||++|++++. ++.+.+|+++.+++ +...
T Consensus 288 ~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg-~l~~ 324 (347)
T 3hfq_A 288 PRDFDLDPTEAFVVVVNQNTDNATLYARDLTSG-KLSL 324 (347)
T ss_dssp CCEEEECTTSSEEEEEETTTTEEEEEEECTTTC-CEEE
T ss_pred cCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCC-eEEe
Confidence 678999999999988886 48999999987654 4443
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=8.2e-23 Score=196.68 Aligned_cols=277 Identities=9% Similarity=-0.043 Sum_probs=208.4
Q ss_pred CCCceEEEEEc-cCCCEEEEecCCceEEEEcCCCcceeeeecccCCCC-ceeEEEEeccCCEEEEEecCCCCCCeEE-EE
Q 018248 5 DPITIHHLALN-QDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRG-GTQLVSMLFRSNIICLVNSGPHQSNKVM-IW 81 (359)
Q Consensus 5 h~~~v~~~~~s-~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~~~~~d~~i~-iw 81 (359)
|...|.+++|| |||++|++++++.+.+|+...++.. .+. .|.. .+..++|+ +++.+++++ .+..+. +|
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~---~~~-~~~~~~~~~~~~s-dg~~l~~~s----~~~~l~~~~ 364 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVL---KVP-EPLRIRYVRRGGD-TKVAFIHGT----REGDFLGIY 364 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEE---ECS-CCSCEEEEEECSS-SEEEEEEEE----TTEEEEEEE
T ss_pred cccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceE---Ecc-CCCcceEEeeeEc-CCCeEEEEE----CCCceEEEE
Confidence 34579999999 9999999998999999999865432 232 4566 77888888 777788777 457888 99
Q ss_pred ECCCccEEeeeccCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecC---
Q 018248 82 DDHENRYLGELSFRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPG--- 155 (359)
Q Consensus 82 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--- 155 (359)
++.+++......+...+..++|+|+++.++ .++.|++||+.+++....+..+...+..++|+|+++.++.+...
T Consensus 365 d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~ 444 (1045)
T 1k32_A 365 DYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHG 444 (1045)
T ss_dssp ETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSS
T ss_pred ECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccc
Confidence 988776554444668899999999998887 67899999999988877777788888899999999864333211
Q ss_pred ----CCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcE------------------
Q 018248 156 ----LLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSL------------------ 213 (359)
Q Consensus 156 ----~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~------------------ 213 (359)
..++.|++|+..+.....+..|...+..++|+|||++|+.++.++. ..+|+......
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSL-DPSPDRVVLNFSFEVVSKPFVIPLIPGSP 523 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCC-CCEECSSSSCEECCSCBEEEEEESSTTCC
T ss_pred cccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccC-CcCcchhccccccccCceeEEEEeCCCCC
Confidence 1236899999887667788888888999999999999999998777 77776433221
Q ss_pred -------------------------EEEeecCCCCcceEEEEecCCCCEEEE-------------EcCCCcEEEEEccCC
Q 018248 214 -------------------------LQEMRRGAERAEIYSLAFSSNAQWLAA-------------SSDKGTVHVFGLKVD 255 (359)
Q Consensus 214 -------------------------~~~~~~~~~~~~i~~~~~s~~~~~l~~-------------~~~dg~i~iw~~~~~ 255 (359)
+..+.. +.+.+..++++|||+++++ ......|.+||+.++
T Consensus 524 ~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~--~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~ 601 (1045)
T 1k32_A 524 NPTKLVPRSMTSEAGEYDLNDMYKRSSPINV--DPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR 601 (1045)
T ss_dssp CGGGCCCGGGSCCCCCCCCTTGGGGCEECSC--CCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTC
T ss_pred CccccCcCccccccccccccCHhHceEEcCC--CCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCC
Confidence 111111 3467889999999987775 122446788888776
Q ss_pred CCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEE
Q 018248 256 SGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCE 335 (359)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~ 335 (359)
+.. ... ..+..++|||||+.|++++.+ .+++|+
T Consensus 602 ~~~---------------------------------~l~-------------~~v~~~~~S~DG~~l~~~~~~-~i~~~d 634 (1045)
T 1k32_A 602 KVT---------------------------------EVK-------------NNLTDLRLSADRKTVMVRKDD-GKIYTF 634 (1045)
T ss_dssp CEE---------------------------------EEE-------------EEEEEEEECTTSCEEEEEETT-SCEEEE
T ss_pred cEE---------------------------------Eee-------------cCcceEEECCCCCEEEEEcCC-cEEEEe
Confidence 511 000 245678999999999998877 799999
Q ss_pred eCCCC
Q 018248 336 FDPMK 340 (359)
Q Consensus 336 ~~~~~ 340 (359)
+....
T Consensus 635 ~~~~~ 639 (1045)
T 1k32_A 635 PLEKP 639 (1045)
T ss_dssp ESSCT
T ss_pred CccCc
Confidence 97643
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=4.1e-23 Score=170.55 Aligned_cols=234 Identities=9% Similarity=-0.048 Sum_probs=172.1
Q ss_pred CCCceEEEEEccCCCEEEEecCCceEEEEcCC-CcceeeeecccCC-CCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 5 DPITIHHLALNQDHGCFATGTETGFRVYLSDP-YKPIMRRDFDRNP-RGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~-~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
|...|.+++|+|+|++|+++.++.|++||+++ ++.... .. +| ...+..++|+++++.+++++........|..++
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~--~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~ 116 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKV--DT-GFATICNNDHGISPDGALYAISDKVEFGKSAIYLLP 116 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEEC--CC-TTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEE
T ss_pred CCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEe--cc-ccccccccceEECCCCCEEEEEEeCCCCcceEEEEE
Confidence 57789999999999999999999999999987 655422 22 33 467788999999998888773311135566666
Q ss_pred CCCccEEeeeccCcceeEEEEecceeEEE----ecCeEEEEEcc-cceeeeeEeccCCCceeeeeecCCCccEEEecCCC
Q 018248 83 DHENRYLGELSFRSEVKNVRLRRDRIVVV----LNQKVYVYNFT-DLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
..+++ ...+.....+..++|+|+++.++ .++.+++|++. .......+..+...+..++|+|+++. +++++..
T Consensus 117 ~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~--l~~~~~~ 193 (297)
T 2ojh_A 117 STGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRW--IYFNSSR 193 (297)
T ss_dssp TTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSE--EEEEECT
T ss_pred CCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCE--EEEEecC
Confidence 66555 34455444588999999998665 68888999863 22334455556667788999998876 3333435
Q ss_pred CeeEEEEec--CCeeeEEeecccccccEEEEccCCcEEEEEeCC-----------CCeEEEEEcCCCcEEEEeecCCCCc
Q 018248 158 KGQVRVEDY--GTKKSKYITAHASRIASIAMTLDGRFVATASSK-----------GTLIRVFNTMDGSLLQEMRRGAERA 224 (359)
Q Consensus 158 d~~v~~~~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~~i~iwd~~~~~~~~~~~~~~~~~ 224 (359)
++.+++|.. .+.....+..|...+.+++|+|+|++|++++.+ +. |++||+.+++.........+..
T Consensus 194 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~ 272 (297)
T 2ojh_A 194 TGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR-VQLMDMDGGNVETLFDLFGGQG 272 (297)
T ss_dssp TSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE-EEEEETTSCSCEEEEEEEESTT
T ss_pred CCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE-EEEEecCCCCceeeeccCCCCc
Confidence 777888654 456677788888889999999999999888765 56 9999998886543332111567
Q ss_pred ceEEEEecCCCCEEEEEcCCC
Q 018248 225 EIYSLAFSSNAQWLAASSDKG 245 (359)
Q Consensus 225 ~i~~~~~s~~~~~l~~~~~dg 245 (359)
.+.+++|+|++++|++++.+.
T Consensus 273 ~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 273 TMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TSCSCCBCTTSSEEEEEEECC
T ss_pred ccccceECCCCCEEEEEEecc
Confidence 899999999999998887654
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=4.4e-22 Score=168.05 Aligned_cols=239 Identities=13% Similarity=0.114 Sum_probs=170.0
Q ss_pred CCCceEEEEEccCCCEEEEec-C-CceEEEEcC--CCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEE
Q 018248 5 DPITIHHLALNQDHGCFATGT-E-TGFRVYLSD--PYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMI 80 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d-~~i~iw~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~i 80 (359)
+...+.+++|+|+|++|++++ + +.|.+|+++ +++......+. . ...+..++++++++.+++++. .++.|.+
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~s~dg~~l~~~~~---~~~~i~~ 110 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-L-PGSLTHISTDHQGQFVFVGSY---NAGNVSV 110 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-C-SSCCSEEEECTTSSEEEEEET---TTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc-c-CCCCcEEEEcCCCCEEEEEec---CCCeEEE
Confidence 556788999999999888877 4 899999998 44443333443 2 237788899999988877664 3689999
Q ss_pred EEC---CCccEEeeeccCcceeEEEEecceeEEE----ecCeEEEEEccc-ceeee----eEec-cCCCceeeeeecCCC
Q 018248 81 WDD---HENRYLGELSFRSEVKNVRLRRDRIVVV----LNQKVYVYNFTD-LKLVD----QIET-VVNPTGLCDVSQNAG 147 (359)
Q Consensus 81 wd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~d~~i~i~d~~~-~~~~~----~~~~-~~~~~~~~~~~~~~~ 147 (359)
||+ .+.+.+..+.....+.+++|+|+++.++ .++.|++||+.+ ++... .+.. .......++|+|+++
T Consensus 111 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred EECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 998 4445566666556789999999997665 579999999976 54432 2222 223456788999887
Q ss_pred ccEEEecCCCCeeEEEEecCC--ee---eEEeec---c---cccccEEEEccCCcEEEEEe-CCCCeEEEEEcC--CC--
Q 018248 148 PMVMACPGLLKGQVRVEDYGT--KK---SKYITA---H---ASRIASIAMTLDGRFVATAS-SKGTLIRVFNTM--DG-- 211 (359)
Q Consensus 148 ~~~l~~~g~~d~~v~~~~~~~--~~---~~~~~~---~---~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~--~~-- 211 (359)
.++++ +..++.+.+|+.+. .. ...+.. . ...+..++|+|+|++|+++. .++. |.+||+. ++
T Consensus 191 ~l~~~--~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~-i~v~d~~~~~~~~ 267 (343)
T 1ri6_A 191 YAYCV--NELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL-ITVFSVSEDGSVL 267 (343)
T ss_dssp EEEEE--ETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTSCCE
T ss_pred EEEEE--eCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE-EEEEEEcCCCCce
Confidence 54333 44688999988743 21 222221 1 23456899999999887554 6888 9999998 33
Q ss_pred cEEEEeecCCCCcceEEEEecCCCCEEEEEc-CCCcEEEEEccC
Q 018248 212 SLLQEMRRGAERAEIYSLAFSSNAQWLAASS-DKGTVHVFGLKV 254 (359)
Q Consensus 212 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~ 254 (359)
+.+..+.. + ..+..++|+|+|++|++++ .++.|.+|+++.
T Consensus 268 ~~~~~~~~--~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 268 SKEGFQPT--E-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEEEEEEC--S-SSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred EEeeeecC--C-CccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 34444543 2 3488999999999888887 679999997764
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=6.2e-22 Score=166.73 Aligned_cols=239 Identities=10% Similarity=0.007 Sum_probs=179.1
Q ss_pred ceEEEEEccCCCEEE-Eec-CCceEEEEcCCCcceeeeecccC---CCCceeEEEEeccCCEEEEEecC------CC--C
Q 018248 8 TIHHLALNQDHGCFA-TGT-ETGFRVYLSDPYKPIMRRDFDRN---PRGGTQLVSMLFRSNIICLVNSG------PH--Q 74 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~-~~~-d~~i~iw~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~~------~~--~ 74 (359)
.+.+++|+|+|++++ ++. ++.|.+||+.+++........ . |...+..++++++++.++++..+ .. .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS-TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC-BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC-CcccccccccceEECCCCCEEEEEeccccccccccccc
Confidence 478899999998764 455 789999999887665433331 1 11256678899998887776411 00 1
Q ss_pred CCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEe
Q 018248 75 SNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 75 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
++.|.+||+.+++.+..+.....+.+++|+|+++.++ .++.|++||+.+++....+..+... ....++|++..+++.
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~- 191 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQ- 191 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCC-
T ss_pred CceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeCCeEEEEECCCCcEeeeeeccccC-CCceeCCCccEEeee-
Confidence 5899999999998888887667788999999998666 8899999999999888777654311 234788888764332
Q ss_pred cCCCCe-----------------------eEEEEecCCeeeE--EeecccccccEEEEccCCcEEEEEeCCCCeEEEEEc
Q 018248 154 PGLLKG-----------------------QVRVEDYGTKKSK--YITAHASRIASIAMTLDGRFVATASSKGTLIRVFNT 208 (359)
Q Consensus 154 ~g~~d~-----------------------~v~~~~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~ 208 (359)
+..++ .|.+|+....... .+..+...+.+++|+|+|++++++ ++. |.+||+
T Consensus 192 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~-v~~~d~ 267 (337)
T 1pby_B 192 -HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV-LESFDL 267 (337)
T ss_dssp -CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE-EEEEET
T ss_pred -ccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe-EEEEEC
Confidence 32333 3566776654332 234455678899999999999888 677 999999
Q ss_pred CCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 209 MDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
.+++.+..+..+ ..+.+++|+|+|++|++++.++.|++||+++++
T Consensus 268 ~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 268 EKNASIKRVPLP---HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp TTTEEEEEEECS---SCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCCcCcceecCC---CceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 999988887742 467899999999999999999999999999876
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=7.7e-22 Score=165.89 Aligned_cols=241 Identities=10% Similarity=0.123 Sum_probs=168.9
Q ss_pred CCceEEEEEccCCCEEEEec--CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCC--eEEEE
Q 018248 6 PITIHHLALNQDHGCFATGT--ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSN--KVMIW 81 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~--~i~iw 81 (359)
...+ +++|+|+|+++++++ ++.|.+||+++++... ..+. .+..+...++++++++.++ ++.. .++ .|.+|
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~-~~~~-~~~~~~~~~~~s~dg~~l~-~~~~--~~~~~~i~v~ 113 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV-VAIQ-EGQSSMADVDITPDDQFAV-TVTG--LNHPFNMQSY 113 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE-EEEE-ECSSCCCCEEECTTSSEEE-ECCC--SSSSCEEEEE
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE-Eecc-cCCCCccceEECCCCCEEE-EecC--CCCcccEEEE
Confidence 3455 999999999765554 7899999998876511 2222 3444544489999999888 4432 123 99999
Q ss_pred ECCCccEEeeeccCcceeEEEEecceeEEE----ecCe-EEEEEcccceee----eeEeccCCCceeeeeecCCCccEEE
Q 018248 82 DDHENRYLGELSFRSEVKNVRLRRDRIVVV----LNQK-VYVYNFTDLKLV----DQIETVVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 82 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~d~~-i~i~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (359)
|+.+++.+..+.......+++|+|+++.++ .++. |.+|++.....+ ............++++|+++.++++
T Consensus 114 d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 114 SFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp ETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred ECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 999999988888777789999999997444 3467 999998643222 1111223445778999998764443
Q ss_pred ecCCCCeeEEEEecCC-ee---eEEeecccccccEEEEccCCcEEEEEe-CCCCeEEEEEcCCCcE--EEEeecC--CCC
Q 018248 153 CPGLLKGQVRVEDYGT-KK---SKYITAHASRIASIAMTLDGRFVATAS-SKGTLIRVFNTMDGSL--LQEMRRG--AER 223 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~-~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~~~~--~~~~~~~--~~~ 223 (359)
+..++.|.+|+... +. +..+.. ...+..++|+|+|++|++++ .++. |.+||+.+++. +..+... .+.
T Consensus 194 --~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~~~~ 269 (331)
T 3u4y_A 194 --NLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVD-VFNFNQLSGTLSFVKSFGHGLLIDP 269 (331)
T ss_dssp --ETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEE-EEEEETTTTEEEEEEEEECCCCCCC
T ss_pred --eCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCE-EEEEECCCCceeeecccccccccCC
Confidence 44688999988764 43 455543 46778999999999777665 4667 99999999877 4444322 112
Q ss_pred c---ceEEEEecCCCCEEEEEc-CCCcEEEEEccCCC
Q 018248 224 A---EIYSLAFSSNAQWLAASS-DKGTVHVFGLKVDS 256 (359)
Q Consensus 224 ~---~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~ 256 (359)
. ....++|+|||++|++++ .++.|.+||+....
T Consensus 270 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 270 RPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp GGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 2 225589999999886554 56799999998754
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=3.8e-21 Score=163.03 Aligned_cols=243 Identities=12% Similarity=0.077 Sum_probs=184.5
Q ss_pred CCceeEEEEeccCCEEEEEecCCC---CCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE----ecCeEEEEEcc
Q 018248 50 RGGTQLVSMLFRSNIICLVNSGPH---QSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV----LNQKVYVYNFT 122 (359)
Q Consensus 50 ~~~v~~~~~~~~~~~~~~~~~~~~---~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~d~~i~i~d~~ 122 (359)
...+..++++++++.+++.+.+.. .++.|.+||..+++.+..+.....+..++|+|+++.++ .++.|.+||..
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 456778899999888877764320 15799999999999999888777789999999987544 56899999999
Q ss_pred cceeeeeEeccCCC---------ceeeeeecCCCccEEEecCCCCeeEEEEecCC-eeeEEeecccccccEEEEccCCcE
Q 018248 123 DLKLVDQIETVVNP---------TGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITAHASRIASIAMTLDGRF 192 (359)
Q Consensus 123 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~ 192 (359)
+++.+..+..+... ...++++|+++.++++. ...++.|.+|+... +....+..+...+..++|+|+|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISG-IGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEE-ESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEe-cCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 99988887664322 46689999988755443 23578899988765 455555546666899999999999
Q ss_pred EEEEeCCCCeEEEEEcCCCcEEEEeecCC--CCcceEEEEecCCCCEEEEEcC-CCcEEEEEccCCCCCCCCCccccCCC
Q 018248 193 VATASSKGTLIRVFNTMDGSLLQEMRRGA--ERAEIYSLAFSSNAQWLAASSD-KGTVHVFGLKVDSGSPGTSKLHSASE 269 (359)
Q Consensus 193 l~~~~~dg~~i~iwd~~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~ 269 (359)
|++++.++. |.+||..+++.+..+..+. +...+..++|+|++++|++++. ++.|.+||+.+++..
T Consensus 199 l~~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~----------- 266 (353)
T 3vgz_A 199 LYTTNADGE-LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNIL----------- 266 (353)
T ss_dssp EEEECTTSE-EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEE-----------
T ss_pred EEEEcCCCe-EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE-----------
Confidence 999999999 9999999999888776421 2446888999999997766654 589999999886611
Q ss_pred CCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEe-cCCeEEEEEeCC
Q 018248 270 PNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVG-LDGSYYKCEFDP 338 (359)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~~~~~ 338 (359)
.. +..+. ...++|+|+++.+++++ .++.|.+|+...
T Consensus 267 ----------------------~~---------~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 267 ----------------------AK---------VAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp ----------------------EE---------EECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred ----------------------EE---------EEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 00 11111 24689999999777766 589999998764
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=4.9e-22 Score=184.60 Aligned_cols=240 Identities=10% Similarity=0.015 Sum_probs=164.4
Q ss_pred ceEEEEEccCCCEEEEec-C---------CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCe
Q 018248 8 TIHHLALNQDHGCFATGT-E---------TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNK 77 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~-d---------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~ 77 (359)
.|.+++|||||++|++++ + +.+.+||+++++........ +|...+..++|+|+++.+++++ ++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-~~~~~~~~~~~SPdG~~la~~~-----~~~ 135 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPE-VSNAKLQYAGWGPKGQQLIFIF-----ENN 135 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTT-CCSCCCSBCCBCSSTTCEEEEE-----TTE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCc-cccccccccEECCCCCEEEEEE-----CCe
Confidence 489999999999999887 4 66889999987653222221 4455588899999999999887 379
Q ss_pred EEEEECCCccEEeeec-cCcce------------------eEEEEecceeEEE---ecC---------------------
Q 018248 78 VMIWDDHENRYLGELS-FRSEV------------------KNVRLRRDRIVVV---LNQ--------------------- 114 (359)
Q Consensus 78 i~iwd~~~~~~~~~~~-~~~~v------------------~~~~~~~~~~~~~---~d~--------------------- 114 (359)
|++||+.+++...... +...+ .+++|+|||+.++ .++
T Consensus 136 i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKP 215 (723)
T ss_dssp EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred EEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCccee
Confidence 9999999887766554 23323 7899999998877 222
Q ss_pred -------------eEEEEEcccceeeeeEecc------CCCceeeeeecCCCccEEEe-cCCCCeeEEEEecCCeee-EE
Q 018248 115 -------------KVYVYNFTDLKLVDQIETV------VNPTGLCDVSQNAGPMVMAC-PGLLKGQVRVEDYGTKKS-KY 173 (359)
Q Consensus 115 -------------~i~i~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~-~g~~d~~v~~~~~~~~~~-~~ 173 (359)
.|++||+.+++....+..+ ...+..++|+|+++.++... .+..+..|++|+...... ..
T Consensus 216 ~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 216 YHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred ccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 7999999887755555443 34566789999987432221 122346788888765443 33
Q ss_pred eec-cccccc----EEEEccCCcEEEE--EeCCC------CeEEEEE-cCCCc--EEEEeecCCCCcceEE-EEecCCCC
Q 018248 174 ITA-HASRIA----SIAMTLDGRFVAT--ASSKG------TLIRVFN-TMDGS--LLQEMRRGAERAEIYS-LAFSSNAQ 236 (359)
Q Consensus 174 ~~~-~~~~i~----~~~~s~~~~~l~~--~~~dg------~~i~iwd-~~~~~--~~~~~~~~~~~~~i~~-~~~s~~~~ 236 (359)
+.. +...+. .++|+|||+.|+. +..++ . |.+|| ..+++ ....+.. +...+.. ++|+|||+
T Consensus 296 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~-l~~~d~~~~~~~~~~~~l~~--~~~~~~~~~~~spdg~ 372 (723)
T 1xfd_A 296 HEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYH-ITVSSSQPNSSNDNIQSITS--GDWDVTKILAYDEKGN 372 (723)
T ss_dssp EEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEE-EEEECSSCCSSSCCCCBSCC--SSSCEEEEEEEETTTT
T ss_pred EEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeE-EEEEeccCCCCccceeEeec--CCeEEEeeeEEcCCCC
Confidence 333 334443 8899999997765 44566 4 66677 33443 1444443 2234554 69999999
Q ss_pred EEEEEcCC---CcEEEEEccCCC
Q 018248 237 WLAASSDK---GTVHVFGLKVDS 256 (359)
Q Consensus 237 ~l~~~~~d---g~i~iw~~~~~~ 256 (359)
.|+..+.+ +.++||++....
T Consensus 373 ~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 373 KIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp EEEEEESSSCTTCCEEEEECSST
T ss_pred EEEEEEcCCCCcceEEEEEeCCC
Confidence 98766554 789999997643
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=3.9e-21 Score=162.73 Aligned_cols=240 Identities=16% Similarity=0.202 Sum_probs=162.8
Q ss_pred CCceEEEEEccCCCEEEEec---CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 6 PITIHHLALNQDHGCFATGT---ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~---d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
...+..++|+|||++++++. ++.|.+|++++++......+. .+...+..++++++++.+++++. .++.|.+|+
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~-~~~~~p~~~a~spdg~~l~~~~~---~~~~v~v~~ 114 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVV-APGTPPAYVAVDEARQLVYSANY---HKGTAEVMK 114 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEE-EESCCCSEEEEETTTTEEEEEET---TTTEEEEEE
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeee-cCCCCCEEEEECCCCCEEEEEeC---CCCEEEEEE
Confidence 34567799999999444443 478999999766543333322 35677888999999998877764 368999999
Q ss_pred CCC-c--cEEeeeccC----------cceeEEEEecceeEEE---ecCeEEEEEcc-cceeee--eEecc-CCCceeeee
Q 018248 83 DHE-N--RYLGELSFR----------SEVKNVRLRRDRIVVV---LNQKVYVYNFT-DLKLVD--QIETV-VNPTGLCDV 142 (359)
Q Consensus 83 ~~~-~--~~~~~~~~~----------~~v~~~~~~~~~~~~~---~d~~i~i~d~~-~~~~~~--~~~~~-~~~~~~~~~ 142 (359)
+.. + +.+..+.+. ..+.+++|+|++++++ .++.|.+|++. +++... .+... ......++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 853 3 233333321 2478899999998555 57899999997 454322 22222 224456899
Q ss_pred ecCCCccEEEecCCCCeeEEEEecCC--ee---eEEeeccc------ccccEEEEccCCcEEEE-EeCCCCeEEEEEcCC
Q 018248 143 SQNAGPMVMACPGLLKGQVRVEDYGT--KK---SKYITAHA------SRIASIAMTLDGRFVAT-ASSKGTLIRVFNTMD 210 (359)
Q Consensus 143 ~~~~~~~~l~~~g~~d~~v~~~~~~~--~~---~~~~~~~~------~~i~~~~~s~~~~~l~~-~~~dg~~i~iwd~~~ 210 (359)
+|+++.++++ +..++.+.+|+.+. .. ...+.... ..+..++|+|||++|++ ...++. |.+|++..
T Consensus 195 spdg~~l~v~--~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~-v~v~~~~~ 271 (347)
T 3hfq_A 195 SPDGQYAFLA--GELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT-LAVFAVTA 271 (347)
T ss_dssp CTTSSEEEEE--ETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE-EEEEEECG
T ss_pred CCCCCEEEEE--eCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE-EEEEEECC
Confidence 9998764443 44578899877653 22 22222222 34788999999998754 456788 99999873
Q ss_pred -C--cEEEEeecCCCCcceEEEEecCCCCEEEEEcC-CCcEEEEEccC
Q 018248 211 -G--SLLQEMRRGAERAEIYSLAFSSNAQWLAASSD-KGTVHVFGLKV 254 (359)
Q Consensus 211 -~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~ 254 (359)
+ +.+..+.. +...+..++|+|||++|++++. ++.|.+|+++.
T Consensus 272 ~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 272 DGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp GGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 2 44445543 3456889999999998888765 48999997654
No 152
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=1.1e-21 Score=168.78 Aligned_cols=286 Identities=10% Similarity=-0.049 Sum_probs=183.3
Q ss_pred EEEccCCCEEEEec--CCc--eEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc
Q 018248 12 LALNQDHGCFATGT--ETG--FRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR 87 (359)
Q Consensus 12 ~~~s~~g~~l~~~~--d~~--i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 87 (359)
.+|||||++|+.++ ++. |.+||+++++.. .... +|...+....|+++++.+++++ .++.|++||+.+++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt~-~~~~~~~~~~~spdg~~l~~~~----~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLTE-GRGDNTFGGFLSPDDDALFYVK----DGRNLMRVDLATLE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--ECCC-SSCBCSSSCEECTTSSEEEEEE----TTTEEEEEETTTCC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--Eeee-CCCCCccceEEcCCCCEEEEEe----CCCeEEEEECCCCc
Confidence 78999999998877 453 777888776543 2222 4444444568999999999988 56899999999998
Q ss_pred EEeeec-cCcceeEE--EEecceeEEE-------------------------ecCeEEEEEcccceeeeeEeccCCCcee
Q 018248 88 YLGELS-FRSEVKNV--RLRRDRIVVV-------------------------LNQKVYVYNFTDLKLVDQIETVVNPTGL 139 (359)
Q Consensus 88 ~~~~~~-~~~~v~~~--~~~~~~~~~~-------------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 139 (359)
....+. +...+... .++|++..++ .+..|++||+.+++... +..+...+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~ 192 (388)
T 3pe7_A 114 ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGH 192 (388)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEE
T ss_pred ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccc
Confidence 776666 33434333 3488887775 12679999998886544 3344556778
Q ss_pred eeeec-CCCccEEEecCCC---CeeEEEEecCCeeeEEeeccc--ccccEEEEccCCcEEEEEeC-C----CCeEEEEEc
Q 018248 140 CDVSQ-NAGPMVMACPGLL---KGQVRVEDYGTKKSKYITAHA--SRIASIAMTLDGRFVATASS-K----GTLIRVFNT 208 (359)
Q Consensus 140 ~~~~~-~~~~~~l~~~g~~---d~~v~~~~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~~-d----g~~i~iwd~ 208 (359)
++|+| +++.++++..+.. ...|.+++..+...+.+..+. ..+..++|+|||+.|+..+. + .. |++||+
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~-l~~~d~ 271 (388)
T 3pe7_A 193 PIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRF-IYSADP 271 (388)
T ss_dssp EEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEE-EEEECT
T ss_pred cEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcce-EEEEec
Confidence 89999 8876444442211 336777777776666666554 35778999999997765443 2 24 899999
Q ss_pred CCCcEEEEeecCCCCcc---eEEEEecCCCCEEEEE---------cCCCcEEEEEccCCCCCCCCCccccCCCCCccCCC
Q 018248 209 MDGSLLQEMRRGAERAE---IYSLAFSSNAQWLAAS---------SDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKN 276 (359)
Q Consensus 209 ~~~~~~~~~~~~~~~~~---i~~~~~s~~~~~l~~~---------~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (359)
.+++.........+... ...++|+|||+.|+.. ..+..|++||+.+++..
T Consensus 272 ~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------------------ 333 (388)
T 3pe7_A 272 ETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH------------------ 333 (388)
T ss_dssp TTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE------------------
T ss_pred CCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE------------------
Confidence 98875432221100000 1123799999988754 44668999999876511
Q ss_pred CCceeeeeEeeeecceEEecccceeEEe-ecCCcEEEeeecccCCEEEEEec-CCeEEEEEeCCC
Q 018248 277 SSAISSFRFIRGVLPKYFSSKWSMAQFR-LPENVQYLVGFGRQNNTIVIVGL-DGSYYKCEFDPM 339 (359)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-dg~i~v~~~~~~ 339 (359)
........+..+. .+...+..++|+|||+.|+..+. +|...+|.++..
T Consensus 334 ---------------~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 334 ---------------RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp ---------------EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred ---------------EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 0000000000000 00013567899999998887775 788888887653
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=2.1e-20 Score=159.15 Aligned_cols=284 Identities=12% Similarity=0.105 Sum_probs=180.6
Q ss_pred ccCCCEEEEec-----CCceEEEEcCC--CcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC--
Q 018248 15 NQDHGCFATGT-----ETGFRVYLSDP--YKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE-- 85 (359)
Q Consensus 15 s~~g~~l~~~~-----d~~i~iw~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~-- 85 (359)
.+...++++|+ ++.|.+|.++. ++....... +......++++++++.+++++.....++.|.+|++..
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~---~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA---EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK 86 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE---ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc---cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC
Confidence 34445666663 46799998753 433332222 4667778899999998888774210137999998765
Q ss_pred ccE--Eeeec-cCcceeEEEEecceeEEE----ecCeEEEEEcccceeeeeE---ecc-----------CCCceeeeeec
Q 018248 86 NRY--LGELS-FRSEVKNVRLRRDRIVVV----LNQKVYVYNFTDLKLVDQI---ETV-----------VNPTGLCDVSQ 144 (359)
Q Consensus 86 ~~~--~~~~~-~~~~v~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~~~---~~~-----------~~~~~~~~~~~ 144 (359)
++. +.... +......+++ ++..++ .++.|.+|++.....+..+ ..+ ...+..++|+|
T Consensus 87 g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp 164 (361)
T 3scy_A 87 GTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP 164 (361)
T ss_dssp TEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT
T ss_pred CcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC
Confidence 433 33333 4456777777 555444 5789999999643322211 111 11225689999
Q ss_pred CCCccEEEecCCCCeeEEEEecCCee-------e-------EEeecccccccEEEEccCCcEEEEEe-CCCCeEEEEEcC
Q 018248 145 NAGPMVMACPGLLKGQVRVEDYGTKK-------S-------KYITAHASRIASIAMTLDGRFVATAS-SKGTLIRVFNTM 209 (359)
Q Consensus 145 ~~~~~~l~~~g~~d~~v~~~~~~~~~-------~-------~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~ 209 (359)
+++.++++ +..++.+.+|+.+... + .....+...+..++|+|||+++++++ .++. |.+||+.
T Consensus 165 dg~~l~~~--~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~~ 241 (361)
T 3scy_A 165 DGKYLLAD--DLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT-VIAFRYA 241 (361)
T ss_dssp TSSEEEEE--ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE-EEEEEEE
T ss_pred CCCEEEEE--eCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe-EEEEEec
Confidence 98864443 4457789998665321 1 11223345678999999999888777 5777 9999998
Q ss_pred CCcE--EEEeecC-CCCcceEEEEecCCCCEEEEEcC--CCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeee
Q 018248 210 DGSL--LQEMRRG-AERAEIYSLAFSSNAQWLAASSD--KGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFR 284 (359)
Q Consensus 210 ~~~~--~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (359)
+++. +..+... .+...+..++|+|||++|+++.. ++.|.+|++...... +.
T Consensus 242 ~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~------------------------~~ 297 (361)
T 3scy_A 242 DGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT------------------------LT 297 (361)
T ss_dssp TTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC------------------------EE
T ss_pred CCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc------------------------EE
Confidence 7754 2333221 12245789999999999876665 488999999743210 00
Q ss_pred EeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEe-cCCeEEEEEeCCCCCCceEE
Q 018248 285 FIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVG-LDGSYYKCEFDPMKGGEMHQ 346 (359)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~v~~~~~~~~~~~~~ 346 (359)
.+. .+.. ...+..++|+|||++|++++ .++.|.+|.++.+.+ ++..
T Consensus 298 ~~~--------------~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g-~~~~ 344 (361)
T 3scy_A 298 KVG--------------YQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG-LLTD 344 (361)
T ss_dssp EEE--------------EEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC-CEEE
T ss_pred Eee--------------EecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC-cEee
Confidence 000 0111 23456899999999999888 579999999987653 4443
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=1.1e-20 Score=159.87 Aligned_cols=228 Identities=11% Similarity=0.056 Sum_probs=167.5
Q ss_pred EEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEE
Q 018248 11 HLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYL 89 (359)
Q Consensus 11 ~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~ 89 (359)
.++++++++++++++ ++.|++||+.+++....... +....+..++++++++.++++.. .++.|.+||+.+++.+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~~~v~~~---~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM--PDKFGPGTAMMAPDNRTAYVLNN---HYGDIYGIDLDTCKNT 78 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC--SSCCSSCEEEECTTSSEEEEEET---TTTEEEEEETTTTEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec--CCCCCCceeEECCCCCEEEEEeC---CCCcEEEEeCCCCcEE
Confidence 456788899998888 99999999998765543333 22225678889998887666553 4699999999999888
Q ss_pred eeecc-------CcceeEEEEecceeEEE---e------------cCeEEEEEccccee---eeeEeccCCCceeeeeec
Q 018248 90 GELSF-------RSEVKNVRLRRDRIVVV---L------------NQKVYVYNFTDLKL---VDQIETVVNPTGLCDVSQ 144 (359)
Q Consensus 90 ~~~~~-------~~~v~~~~~~~~~~~~~---~------------d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~ 144 (359)
..+.. ...+..++|+|+++.++ . ++.|.+||+.+++. +..+.. ...+..++++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~ 157 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAAD 157 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECT
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECC
Confidence 77763 23378999999998777 3 39999999987543 333333 33467788999
Q ss_pred CCCccEEEecCCCCeeEEEEecCC-eeeEEeeccc---------------------------------------------
Q 018248 145 NAGPMVMACPGLLKGQVRVEDYGT-KKSKYITAHA--------------------------------------------- 178 (359)
Q Consensus 145 ~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~--------------------------------------------- 178 (359)
+++ ++ +. + +.|.+|+... +....+..+.
T Consensus 158 dg~-l~-~~-~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 231 (349)
T 1jmx_B 158 DGS-LY-VA-G---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADL 231 (349)
T ss_dssp TSC-EE-EE-S---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEE
T ss_pred CCc-EE-Ec-c---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccc
Confidence 987 33 33 2 2377777643 3333332221
Q ss_pred -----------------------ccccEEEEcc-CCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCC
Q 018248 179 -----------------------SRIASIAMTL-DGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSN 234 (359)
Q Consensus 179 -----------------------~~i~~~~~s~-~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 234 (359)
..+..++|+| ++++++++ ++. |.+||+.+++.+..+..+ ..+.+++|+|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-v~~~d~~~~~~~~~~~~~---~~~~~~~~s~d 305 (349)
T 1jmx_B 232 LYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-LAKYDLKQRKLIKAANLD---HTYYCVAFDKK 305 (349)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-EEEEETTTTEEEEEEECS---SCCCEEEECSS
T ss_pred ceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-EEEEECccCeEEEEEcCC---CCccceEECCC
Confidence 1345677889 99999888 777 999999999988887642 35779999999
Q ss_pred CCEEEEEcCCCcEEEEEccCCC
Q 018248 235 AQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 235 ~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
|++|++++.++.|++||+++++
T Consensus 306 g~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 306 GDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp SSCEEEESBSSEEEEEETTTTE
T ss_pred CCEEEEecCCCeEEEEeccccc
Confidence 9998888889999999998865
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=3.5e-22 Score=185.47 Aligned_cols=242 Identities=9% Similarity=-0.012 Sum_probs=162.4
Q ss_pred EEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCC---ceeEEEEeccCCEEEEEecCC-----CCCCeEEEE
Q 018248 10 HHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRG---GTQLVSMLFRSNIICLVNSGP-----HQSNKVMIW 81 (359)
Q Consensus 10 ~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~~~~~~-----~~d~~i~iw 81 (359)
.+++|+|||++++++.|+.|++||+.+++...... +|.. .+..++|+|+++.+++++... ..++.|++|
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVLYNIETGQSYTILS---NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEEEESSSCCEEEEEC---HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEc---cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 37899999976666669999999999876543222 2222 378899999999998887310 015899999
Q ss_pred ECCCccEEeeeccCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeEe-ccCC-----------------Cceeee
Q 018248 82 DDHENRYLGELSFRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIE-TVVN-----------------PTGLCD 141 (359)
Q Consensus 82 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~-~~~~-----------------~~~~~~ 141 (359)
|+.+++.+........+..++|+|||+.++ .++.|++|++.+++...... ++.. ....++
T Consensus 96 d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 96 DLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp ETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred ECCCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 999988742223346688999999998887 89999999998776543321 1111 114789
Q ss_pred eecCCCccEEEecCC-------------------------------CCeeEEEEecCCeee---EE------eecccccc
Q 018248 142 VSQNAGPMVMACPGL-------------------------------LKGQVRVEDYGTKKS---KY------ITAHASRI 181 (359)
Q Consensus 142 ~~~~~~~~~l~~~g~-------------------------------~d~~v~~~~~~~~~~---~~------~~~~~~~i 181 (359)
|+|+++.++.++... ....|++|+..+... .. +..|...+
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 999998744433100 112677788776442 11 23577789
Q ss_pred cEEEEccCCcEEEEEeCC----CCeEEEEE----cCCCcEEEEee---cCCCCcceE-----EEEecCCCCEEEE--EcC
Q 018248 182 ASIAMTLDGRFVATASSK----GTLIRVFN----TMDGSLLQEMR---RGAERAEIY-----SLAFSSNAQWLAA--SSD 243 (359)
Q Consensus 182 ~~~~~s~~~~~l~~~~~d----g~~i~iwd----~~~~~~~~~~~---~~~~~~~i~-----~~~~s~~~~~l~~--~~~ 243 (359)
..++|+||++++++.... .. |.+|| ..+++....+. .. +...+. .+.|+|||+.|+. ...
T Consensus 256 ~~~~~SpD~~~~~~~~~~~~~~~~-l~~~d~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 333 (719)
T 1z68_A 256 SWLTWVTDERVCLQWLKRVQNVSV-LSICDFREDWQTWDCPKTQEHIEES-RTGWAGGFFVSTPVFSYDAISYYKIFSDK 333 (719)
T ss_dssp EEEEESSSSEEEEEEEESSTTEEE-EEEEEECSSSSSEECCGGGEEEEEC-SSSCSSSSSCCCCEECTTSSCEEEEEECT
T ss_pred EEeEEeCCCeEEEEEeccccCeEE-EEEEcccCCCCCCceEEEEeccccc-CCceEccccCCccEECCCCCeEEEEEEcc
Confidence 999999998877774422 24 88899 77776544331 11 445565 7899999996544 445
Q ss_pred CCc--EEEEEccCCC
Q 018248 244 KGT--VHVFGLKVDS 256 (359)
Q Consensus 244 dg~--i~iw~~~~~~ 256 (359)
+|. |.+|++.+++
T Consensus 334 ~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 334 DGYKHIHYIKDTVEN 348 (719)
T ss_dssp TSCEEEEEESSCSTT
T ss_pred CCceEEEEEECCCCc
Confidence 664 5566665543
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=4.1e-21 Score=173.91 Aligned_cols=230 Identities=10% Similarity=0.019 Sum_probs=166.9
Q ss_pred CCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccC-cceeEEEEecceeEEE-e-----cCeEEEEEcc
Q 018248 50 RGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFR-SEVKNVRLRRDRIVVV-L-----NQKVYVYNFT 122 (359)
Q Consensus 50 ~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~-~-----d~~i~i~d~~ 122 (359)
..++..++++++++.+++++. .|++++||++.+++..+...+. ..+..++|+|+ ++++ . +....+|.+.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~---~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGF---SEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEE---ETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEc---cCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 567899999999999998873 2799999998666655544455 68999999999 6555 2 2445565543
Q ss_pred c---ceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCC
Q 018248 123 D---LKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSK 199 (359)
Q Consensus 123 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 199 (359)
. +... .+.. .......+|+|+++..++++ +..++ +.+|+..+.....+..+.. .+++|||||++|++++.+
T Consensus 97 ~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s-~~~~~-~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 97 TSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTG-ATEDR-VALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp TTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEE-ECSSC-EEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEE
T ss_pred ccCCCccc-cccC-CCCceeeeeCCCCCeEEEEe-cCCCC-ceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEc
Confidence 2 3222 3322 22345679999999877765 44444 4488877665555554444 899999999999988776
Q ss_pred ----CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCC--cEEEEEccCCCCCCCCCccccCCCCCcc
Q 018248 200 ----GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKG--TVHVFGLKVDSGSPGTSKLHSASEPNLS 273 (359)
Q Consensus 200 ----g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 273 (359)
+. |++||+.+++.. .+.. +...+..++|||||++|+++..++ .|++||+++++..
T Consensus 171 ~~~~~~-i~~~d~~~g~~~-~l~~--~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~--------------- 231 (582)
T 3o4h_A 171 GGGRVS-LFTSNLSSGGLR-VFDS--GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE--------------- 231 (582)
T ss_dssp ETTEEE-EEEEETTTCCCE-EECC--SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE---------------
T ss_pred CCCCeE-EEEEcCCCCCce-Eeec--CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE---------------
Confidence 67 999999888765 4444 567889999999999999888888 8999999876511
Q ss_pred CCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEee--------ecccCCEEEEEecCCeEEEEEe
Q 018248 274 SKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVG--------FGRQNNTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~~~~~dg~i~v~~~ 336 (359)
. +..+...+..++ |+|||..+++++.||.+++|.+
T Consensus 232 -------------------~---------~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 232 -------------------D---------LELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp -------------------E---------CCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred -------------------E---------ccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 0 001112223334 9999988899999999999987
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=6.1e-20 Score=155.30 Aligned_cols=227 Identities=11% Similarity=0.062 Sum_probs=160.0
Q ss_pred EeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCc--ceeEEEEecceeEEE----ecCeEEEEEcccceeeeeEe
Q 018248 58 MLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRS--EVKNVRLRRDRIVVV----LNQKVYVYNFTDLKLVDQIE 131 (359)
Q Consensus 58 ~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~~~~ 131 (359)
+..++..++..+ .++.|.+||+.+++.+..+.... .+..++|+|+++.++ .++.|.+||+.+++.+..+.
T Consensus 7 ~~~~~~~~v~~~----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 7 LKAGHEYMIVTN----YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCTTCEEEEEEE----TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccCCCEEEEEeC----CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 333344444444 57999999999999988887544 688999999997544 57899999999998887776
Q ss_pred ccCC------CceeeeeecCCCccEEEecC---------CCCeeEEEEecCC----eeeEEeecccccccEEEEccCCcE
Q 018248 132 TVVN------PTGLCDVSQNAGPMVMACPG---------LLKGQVRVEDYGT----KKSKYITAHASRIASIAMTLDGRF 192 (359)
Q Consensus 132 ~~~~------~~~~~~~~~~~~~~~l~~~g---------~~d~~v~~~~~~~----~~~~~~~~~~~~i~~~~~s~~~~~ 192 (359)
.... .+..++++|+++.++++... ..++.|.+|+... +.+..+. +...+.+++|+|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS- 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-
Confidence 4322 25678999998864443310 0137899988764 2223333 334688999999999
Q ss_pred EEEEeCCCCeEEEEEcCCCcEEEEeecCCC--------------------------------------------------
Q 018248 193 VATASSKGTLIRVFNTMDGSLLQEMRRGAE-------------------------------------------------- 222 (359)
Q Consensus 193 l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~-------------------------------------------------- 222 (359)
++++ ++. |.+||..+++.+..+..+..
T Consensus 161 l~~~--~~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 161 LYVA--GPD-IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp EEEE--SSS-EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred EEEc--cCc-EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 5555 345 99999999988777654210
Q ss_pred ----------------CcceEEEEecC-CCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeE
Q 018248 223 ----------------RAEIYSLAFSS-NAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRF 285 (359)
Q Consensus 223 ----------------~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (359)
...+..++|+| ++++|+++ ++.|.+||+.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~--------------------------- 288 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLI--------------------------- 288 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEE---------------------------
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEE---------------------------
Confidence 01345677889 99988887 788999999876511
Q ss_pred eeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 286 IRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
+. +.. ...+..++|+||+++|++++.++.|++|++..
T Consensus 289 ------~~---------~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 289 ------KA---------ANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp ------EE---------EEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred ------EE---------EcC-CCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 00 111 12356799999999999998899999998765
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=1.3e-19 Score=154.19 Aligned_cols=237 Identities=10% Similarity=0.108 Sum_probs=156.9
Q ss_pred CCceEEEEEccCCCEEEEec-C----CceEEEEcCC--CcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeE
Q 018248 6 PITIHHLALNQDHGCFATGT-E----TGFRVYLSDP--YKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKV 78 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~-d----~~i~iw~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i 78 (359)
...+..++|+|||++|++++ + +.|.+|+++. ++........ .+......+++ +++.++++.. .++.|
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~-~~~~~p~~~~~--dg~~l~~~~~---~~~~v 122 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQK-TMGADPCYLTT--NGKNIVTANY---SGGSI 122 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEE-CSSSCEEEEEE--CSSEEEEEET---TTTEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEec-cCCCCcEEEEE--CCCEEEEEEC---CCCEE
Confidence 44567799999999998888 4 6899999875 3333323332 23334444554 6776666553 46999
Q ss_pred EEEECCCccEEeee----cc-----------CcceeEEEEecceeEEE----ecCeEEEEEccccee------e------
Q 018248 79 MIWDDHENRYLGEL----SF-----------RSEVKNVRLRRDRIVVV----LNQKVYVYNFTDLKL------V------ 127 (359)
Q Consensus 79 ~iwd~~~~~~~~~~----~~-----------~~~v~~~~~~~~~~~~~----~d~~i~i~d~~~~~~------~------ 127 (359)
.+|++.....+..+ .+ ...+.+++|+|++++++ .++.|.+|++..... +
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~ 202 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTP 202 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEE
T ss_pred EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccc
Confidence 99998754333221 11 22357899999998655 478999999864331 1
Q ss_pred eeE-eccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeE---Eee---cccccccEEEEccCCcEEEEEeCC-
Q 018248 128 DQI-ETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSK---YIT---AHASRIASIAMTLDGRFVATASSK- 199 (359)
Q Consensus 128 ~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~---~~~---~~~~~i~~~~~s~~~~~l~~~~~d- 199 (359)
... .........++|+|+++.++++ +..++.|.+|+.....+. .+. .+......++|+|||++|+++..+
T Consensus 203 ~~~~~~~~~~~~~~~~spdg~~l~v~--~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~ 280 (361)
T 3scy_A 203 EAFKVAPGSGPRHLIFNSDGKFAYLI--NEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK 280 (361)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEE--ETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS
T ss_pred cceecCCCCCCeEEEEcCCCCEEEEE--cCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC
Confidence 111 1223345678999998764443 445789999877543322 222 223446799999999998777655
Q ss_pred -CCeEEEEEcC--CCc--EEEEeecCCCCcceEEEEecCCCCEEEEEc-CCCcEEEEEccC
Q 018248 200 -GTLIRVFNTM--DGS--LLQEMRRGAERAEIYSLAFSSNAQWLAASS-DKGTVHVFGLKV 254 (359)
Q Consensus 200 -g~~i~iwd~~--~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~ 254 (359)
+. |.+|++. +++ .+..+.. ...+..++|+|||++|++++ .++.|.+|+++.
T Consensus 281 ~~~-i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 281 ADG-VAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp SCE-EEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred CCE-EEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 77 9999985 455 3334432 34678999999999888877 678999987764
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=4.1e-19 Score=151.24 Aligned_cols=273 Identities=10% Similarity=-0.001 Sum_probs=175.3
Q ss_pred EEEEec-C--CceEEEEcC--CCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC-CccEEeeec
Q 018248 20 CFATGT-E--TGFRVYLSD--PYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH-ENRYLGELS 93 (359)
Q Consensus 20 ~l~~~~-d--~~i~iw~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~-~~~~~~~~~ 93 (359)
.+++|+ . +.|.+|+++ +++.........++...+..++++++++.++.++ .+ .|.+|++. +++......
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~----~~-~v~~~~~~~~g~~~~~~~ 78 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA----MK-KWSSFAVKSPTEIVHEAS 78 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE----BT-EEEEEEEEETTEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEc----cc-eEEEEEECCCCCEEEeeE
Confidence 345555 2 568887764 4433322222102234677889999998887666 44 99999987 776654433
Q ss_pred c--CcceeEEEEecceeE--EE-e---------------cCeEEEEEcc-cceeeeeEec----cCCCceeeeeecCCCc
Q 018248 94 F--RSEVKNVRLRRDRIV--VV-L---------------NQKVYVYNFT-DLKLVDQIET----VVNPTGLCDVSQNAGP 148 (359)
Q Consensus 94 ~--~~~v~~~~~~~~~~~--~~-~---------------d~~i~i~d~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~ 148 (359)
+ .+.+..++|+|+++. ++ . ++.+.+|++. +++....+.. +...+..++|+|+++.
T Consensus 79 ~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~ 158 (365)
T 1jof_A 79 HPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY 158 (365)
T ss_dssp EECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE
T ss_pred eecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE
Confidence 2 234667899999984 32 2 6789999996 4655444432 3445678899999876
Q ss_pred cEEEecCCCCeeEEEEecC-Ceee---EEee--cccccccEEEEccCCcEEEEEeC-CCCeEEEEEcC--CCcEEE---E
Q 018248 149 MVMACPGLLKGQVRVEDYG-TKKS---KYIT--AHASRIASIAMTLDGRFVATASS-KGTLIRVFNTM--DGSLLQ---E 216 (359)
Q Consensus 149 ~~l~~~g~~d~~v~~~~~~-~~~~---~~~~--~~~~~i~~~~~s~~~~~l~~~~~-dg~~i~iwd~~--~~~~~~---~ 216 (359)
++++ ...++.|++|+.+ ...+ ..+. .|...+..++|+|||++|++++. ++. |.+|++. +++... .
T Consensus 159 l~~~--~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~ 235 (365)
T 1jof_A 159 LYSA--DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNR-ICEYVIDPATHMPVYTHHS 235 (365)
T ss_dssp EEEE--ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTTCCEEEEEEE
T ss_pred EEEE--cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCe-EEEEEEeCCCCcEEEccce
Confidence 4332 3346789998875 3222 2232 23566899999999999988775 567 9999875 565432 2
Q ss_pred eec---C--CCCc------ceEEEE-ecCCCCEEEEEcCC-C-----cEEEEEccC-CCCCCCCCccccCCCCCccCCCC
Q 018248 217 MRR---G--AERA------EIYSLA-FSSNAQWLAASSDK-G-----TVHVFGLKV-DSGSPGTSKLHSASEPNLSSKNS 277 (359)
Q Consensus 217 ~~~---~--~~~~------~i~~~~-~s~~~~~l~~~~~d-g-----~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 277 (359)
+.. + .+.. .+..++ |+|||++|++++.+ + .|.+|+++. ++ .
T Consensus 236 ~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~-~------------------- 295 (365)
T 1jof_A 236 FPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS-I------------------- 295 (365)
T ss_dssp EESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC-E-------------------
T ss_pred EEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC-E-------------------
Confidence 221 1 0111 488999 99999998776543 2 899999973 32 0
Q ss_pred CceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecc---cCCEEEEEecC-CeEEEEEeCCC
Q 018248 278 SAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGR---QNNTIVIVGLD-GSYYKCEFDPM 339 (359)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~d-g~i~v~~~~~~ 339 (359)
..+. .. ...+...+..++|+| ||++|++++.+ +.|.+|+++.+
T Consensus 296 ------~~~~----~~---------~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 296 ------EKQL----FL---------SPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ------EEEE----EE---------EECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ------EEee----ee---------eecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 0000 00 111122345689999 89999999874 89999999863
No 160
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.87 E-value=1.2e-20 Score=162.55 Aligned_cols=286 Identities=9% Similarity=-0.052 Sum_probs=179.3
Q ss_pred eEEEEEccCCCEEEEec--CC--ceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 9 IHHLALNQDHGCFATGT--ET--GFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 9 v~~~~~s~~g~~l~~~~--d~--~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
+.+++|||||++|+... ++ .|.+|++++++... +..++........|+++++.+++++ .++.|++||+.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~---l~~~~~~~~~~~~~spdg~~l~~~~----~~~~l~~~d~~ 110 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ---LTEGKGDNTFGGFISTDERAFFYVK----NELNLMKVDLE 110 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE---CCCSSCBCTTTCEECTTSSEEEEEE----TTTEEEEEETT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE---eecCCCCccccceECCCCCEEEEEE----cCCcEEEEECC
Confidence 67889999999988775 23 57888887754332 2212222233367899999998888 56789999998
Q ss_pred CccEEeeec-cCcceeE-------------------EEEecceeEEE--------ecCeEEEEEcccceeeeeEeccCCC
Q 018248 85 ENRYLGELS-FRSEVKN-------------------VRLRRDRIVVV--------LNQKVYVYNFTDLKLVDQIETVVNP 136 (359)
Q Consensus 85 ~~~~~~~~~-~~~~v~~-------------------~~~~~~~~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~ 136 (359)
+++...... +...... ..++|++..++ .+..|++||+.+++..... .+...
T Consensus 111 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~ 189 (396)
T 3c5m_A 111 TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAW 189 (396)
T ss_dssp TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSC
T ss_pred CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcc
Confidence 887665554 2221111 23455554443 2347999999887655444 34556
Q ss_pred ceeeeeec-CCCccEEEecCCCC---eeEEEEecCCeeeEEeecc--cccccEEEEccCCcEEEEEeCC-----CCeEEE
Q 018248 137 TGLCDVSQ-NAGPMVMACPGLLK---GQVRVEDYGTKKSKYITAH--ASRIASIAMTLDGRFVATASSK-----GTLIRV 205 (359)
Q Consensus 137 ~~~~~~~~-~~~~~~l~~~g~~d---~~v~~~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~d-----g~~i~i 205 (359)
+..+.|+| ++..++++..+..+ ..|.+++..+.....+..+ ...+..++|+|||++|+.++.+ +. |++
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~-l~~ 268 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRV-IYK 268 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEE-EEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccce-EEE
Confidence 77789999 66654444321111 4677777776655555443 2357789999999987777544 45 999
Q ss_pred EEcCCCcEEEEeecCCCCcceEEEEecC-CCCEEEEEc----------------CCCcEEEEEccCCCCCCCCCccccCC
Q 018248 206 FNTMDGSLLQEMRRGAERAEIYSLAFSS-NAQWLAASS----------------DKGTVHVFGLKVDSGSPGTSKLHSAS 268 (359)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~----------------~dg~i~iw~~~~~~~~~~~~~~~~~~ 268 (359)
||+.+++....... . ... +.|+| ||+++++++ .+..|++||+.+++...
T Consensus 269 ~d~~~g~~~~l~~~---~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--------- 334 (396)
T 3c5m_A 269 ANPETLENEEVMVM---P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK--------- 334 (396)
T ss_dssp ECTTTCCEEEEEEC---C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCE---------
T ss_pred EECCCCCeEEeeeC---C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEE---------
Confidence 99988876543322 1 223 89999 999888754 34679999998765210
Q ss_pred CCCccCCCCCceeeeeEeeeecceEEecccceeEEe-ecCCcEEEeeecccCCEEEEEec-CCeEEEEEeCCCCC
Q 018248 269 EPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFR-LPENVQYLVGFGRQNNTIVIVGL-DGSYYKCEFDPMKG 341 (359)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-dg~i~v~~~~~~~~ 341 (359)
.......+..+. -....+..++|+|||+.|+.++. +|...+|.++...+
T Consensus 335 ------------------------l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 335 ------------------------LCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp ------------------------EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred ------------------------ccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccc
Confidence 000000000000 00001345789999998887775 67778888776543
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.87 E-value=2.5e-20 Score=173.25 Aligned_cols=246 Identities=13% Similarity=0.069 Sum_probs=165.5
Q ss_pred CCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCc---e--eEEEEeccCCEEEEEecCCC-----CC
Q 018248 6 PITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGG---T--QLVSMLFRSNIICLVNSGPH-----QS 75 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~---v--~~~~~~~~~~~~~~~~~~~~-----~d 75 (359)
.....+++|+|||++++++ |+.|++|++.+++.... +. +|... + ..++++|+++.+++.+.... ..
T Consensus 16 ~~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVF--LE-NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEE--EC-TTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred cccccccEECCCCcEEEEc-CCcEEEEECCCCceEEE--Ee-chhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 3456789999999999887 99999999998775432 32 44322 2 23788999999988873110 12
Q ss_pred CeEEEEECCCccEEeeeccCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeE-eccCC-----------------
Q 018248 76 NKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQI-ETVVN----------------- 135 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~-~~~~~----------------- 135 (359)
+.+.+||+.+++......+...+...+|+|||+.++ .++.|++|++.+++..+.. .++..
T Consensus 92 ~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 92 ASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred eEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 677899999988765444778899999999999888 8999999999777643321 11111
Q ss_pred CceeeeeecCCCccEEEec-------------------------------CCCC--eeEEEEecCC---e---eeEEeec
Q 018248 136 PTGLCDVSQNAGPMVMACP-------------------------------GLLK--GQVRVEDYGT---K---KSKYITA 176 (359)
Q Consensus 136 ~~~~~~~~~~~~~~~l~~~-------------------------------g~~d--~~v~~~~~~~---~---~~~~~~~ 176 (359)
....+.|+||++.++.+.. |..+ ..|++|+..+ . ....+..
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 1134789999987444321 0111 2466688776 4 4444442
Q ss_pred ------ccccccEEEEccCCcEEEEEeC----CCCeEEEEEcCCCc----EE--EEeecCCCCcceE-----EEEecCCC
Q 018248 177 ------HASRIASIAMTLDGRFVATASS----KGTLIRVFNTMDGS----LL--QEMRRGAERAEIY-----SLAFSSNA 235 (359)
Q Consensus 177 ------~~~~i~~~~~s~~~~~l~~~~~----dg~~i~iwd~~~~~----~~--~~~~~~~~~~~i~-----~~~~s~~~ 235 (359)
|...+..++|+|||+.++.... +.. |++||+.+++ +. ..+....+...+. ..+|+|||
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~-i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG 330 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSV-MDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG 330 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEE-EEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE-EEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC
Confidence 7778999999999997665533 235 9999999887 21 1110011334443 78899999
Q ss_pred CEEE-EEc-CCC--cEEEEEccCCC
Q 018248 236 QWLA-ASS-DKG--TVHVFGLKVDS 256 (359)
Q Consensus 236 ~~l~-~~~-~dg--~i~iw~~~~~~ 256 (359)
+.|+ ..+ .+| .|++|++..+.
T Consensus 331 ~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 331 NSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp SEEEEEEECTTSCEEEEEEETTCSS
T ss_pred CEEEEEEEcCCCceEEEEEECCCCc
Confidence 9876 555 344 57778877654
No 162
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=1.1e-18 Score=151.43 Aligned_cols=242 Identities=13% Similarity=0.080 Sum_probs=165.9
Q ss_pred CCCceEEEEEccCCCEEEEec-CCceEEEEcCCCc----------cee----eeecccCCCCceeEEEEeccCCEEEEE-
Q 018248 5 DPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYK----------PIM----RRDFDRNPRGGTQLVSMLFRSNIICLV- 68 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~----------~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~~- 68 (359)
+...+..+++++++.++++++ ++ +++|+..... ... ...+ .|...+..++|+++++.++++
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~l~~spdg~~lav~~ 111 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV--PMKFPIHHLALSCDNLTLSACM 111 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE--CCSSCEEEEEECTTSCEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc--cCCCcccEEEEcCCCCEEEEEE
Confidence 345689999999999999998 55 9998764110 000 0112 356679999999999888753
Q ss_pred -ecCCCCCCeEEEEECCCc--------cE---Eeeec-cCcceeEEEEecc-eeEEE---ecCeEEEEEcccceeeeeEe
Q 018248 69 -NSGPHQSNKVMIWDDHEN--------RY---LGELS-FRSEVKNVRLRRD-RIVVV---LNQKVYVYNFTDLKLVDQIE 131 (359)
Q Consensus 69 -~~~~~~d~~i~iwd~~~~--------~~---~~~~~-~~~~v~~~~~~~~-~~~~~---~d~~i~i~d~~~~~~~~~~~ 131 (359)
+++ .|+.|++||+.++ +. +..+. |...|.+++|+|+ +.+++ .|++|++||+++++.+....
T Consensus 112 ~sgs--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~ 189 (434)
T 2oit_A 112 MSSE--YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL 189 (434)
T ss_dssp EETT--TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE
T ss_pred eccC--CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc
Confidence 233 6899999998765 22 33444 7899999999998 66665 89999999999887766666
Q ss_pred ccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecc-------cccccEEEEccCCcEEEEEe-CCCC--
Q 018248 132 TVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAH-------ASRIASIAMTLDGRFVATAS-SKGT-- 201 (359)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~-------~~~i~~~~~s~~~~~l~~~~-~dg~-- 201 (359)
.|...+.+++|+|+++. +++ |+.||.|++|+.++.....+..| ...+.+++|++++.++++.+ .+|.
T Consensus 190 ~~~~~v~~v~wspdg~~--las-gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~ 266 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQ--LAV-GKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLE 266 (434)
T ss_dssp CGGGCEEEEEECTTSSC--EEE-EETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSS
T ss_pred CCCCceeEEEEcCCCCE--EEE-EcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccC
Confidence 77888999999999876 555 55799999999886555555443 23789999999998876543 3321
Q ss_pred ---eEEEEEcCCCc-----EEEEeecC-----CCCcceEEEEecCCCCEEEEEc-CCCcEEEEEccC
Q 018248 202 ---LIRVFNTMDGS-----LLQEMRRG-----AERAEIYSLAFSSNAQWLAASS-DKGTVHVFGLKV 254 (359)
Q Consensus 202 ---~i~iwd~~~~~-----~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~ 254 (359)
.+++|+++..+ ....+... ....+-..+.+-++.+++++++ ..+.|.|.....
T Consensus 267 ~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 267 TSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp SCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred CCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecC
Confidence 18899997642 22222110 1222333344446767665554 455577776543
No 163
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=9.4e-20 Score=158.23 Aligned_cols=169 Identities=15% Similarity=0.152 Sum_probs=125.6
Q ss_pred CeEEEEECCCccEEeeeccCcceeEEEEecceeEEE--ecCeEEEEEccccee----------eee-----EeccCCCce
Q 018248 76 NKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKL----------VDQ-----IETVVNPTG 138 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~----------~~~-----~~~~~~~~~ 138 (359)
+.+++|+... . + ....+..+++++++.+++ ....+++|+...... +.. ...+...+.
T Consensus 23 ~~vri~~~~~-~----~-~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (434)
T 2oit_A 23 KKVRIFDSPE-E----L-PKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH 96 (434)
T ss_dssp CEEECSCCCS-S----C-CCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE
T ss_pred eeEEecCCcc-c----c-CCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCccc
Confidence 5677776321 1 1 234578899999877776 444599988632111 000 012345688
Q ss_pred eeeeecCCCccEEEe-cCCCCeeEEEEecCCe------------eeEEeecccccccEEEEccC-CcEEEEEeCCCCeEE
Q 018248 139 LCDVSQNAGPMVMAC-PGLLKGQVRVEDYGTK------------KSKYITAHASRIASIAMTLD-GRFVATASSKGTLIR 204 (359)
Q Consensus 139 ~~~~~~~~~~~~l~~-~g~~d~~v~~~~~~~~------------~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~~i~ 204 (359)
.++|+|+++.++++. +|+.|+.|++|+.... ....+.+|...|.+++|+|+ +.+|++++.||. |+
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~-v~ 175 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS-IA 175 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC-EE
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe-EE
Confidence 899999987532211 4778999999986432 24556779999999999998 889999999999 99
Q ss_pred EEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 018248 205 VFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLK 253 (359)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 253 (359)
+||++++..+..... |...|.+++|+|+|++|++|+.||.|++||++
T Consensus 176 iwD~~~~~~~~~~~~--~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 176 VLQVTETVKVCATLP--STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEESSSEEEEEEEC--GGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEcCCCcceeeccC--CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 999999877655554 66799999999999999999999999999998
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=5.2e-19 Score=150.63 Aligned_cols=242 Identities=9% Similarity=0.103 Sum_probs=160.5
Q ss_pred CceEEEEEccCCCEEEEecCCceEEEEcC-CCcceeeeecccCCCCceeEEEEeccCCEEEE-Eec-------CC--C-C
Q 018248 7 ITIHHLALNQDHGCFATGTETGFRVYLSD-PYKPIMRRDFDRNPRGGTQLVSMLFRSNIICL-VNS-------GP--H-Q 74 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~-~~~-------~~--~-~ 74 (359)
..+..++|+|||++|++++.+.|.+|+++ +++........ .+ +....++++++++.+++ ++. +. . .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~-~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHP-IG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEE-CC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEee-cC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 46789999999999988883399999997 55443222211 11 23445677777775333 331 10 0 1
Q ss_pred CCeEEEEECC-CccEEeeec-----cCcceeEEEEecceeEEE----ecCeEEEEEcc-cceee--eeEec--cCCCcee
Q 018248 75 SNKVMIWDDH-ENRYLGELS-----FRSEVKNVRLRRDRIVVV----LNQKVYVYNFT-DLKLV--DQIET--VVNPTGL 139 (359)
Q Consensus 75 d~~i~iwd~~-~~~~~~~~~-----~~~~v~~~~~~~~~~~~~----~d~~i~i~d~~-~~~~~--~~~~~--~~~~~~~ 139 (359)
++.+.+|++. +++....+. +...+.+++|+|+|++++ .++.|++|++. +++.. ..+.. +......
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 5899999987 465544333 346789999999998666 35799999997 66543 23332 2345677
Q ss_pred eeeecCCCccEEEecCCCCeeEEEEecC---Ceee---EEee-------cccc------cccEEE-EccCCcEEEEEeCC
Q 018248 140 CDVSQNAGPMVMACPGLLKGQVRVEDYG---TKKS---KYIT-------AHAS------RIASIA-MTLDGRFVATASSK 199 (359)
Q Consensus 140 ~~~~~~~~~~~l~~~g~~d~~v~~~~~~---~~~~---~~~~-------~~~~------~i~~~~-~s~~~~~l~~~~~d 199 (359)
++|+|+++.++++ +..++.+.+|+.+ ++.. ..+. +|.. .+..++ |+|||++|++++.+
T Consensus 198 ~~~spdg~~l~v~--~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 198 VAMHPTGNYLYAL--MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEECTTSSEEEEE--ETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred eEECCCCCEEEEE--ECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 8999998864443 3346789887653 3221 1221 1122 478899 99999988877643
Q ss_pred C------CeEEEEEcC-CCcEEEE---eecCCCCcceEEEEecC---CCCEEEEEcCC-CcEEEEEccCC
Q 018248 200 G------TLIRVFNTM-DGSLLQE---MRRGAERAEIYSLAFSS---NAQWLAASSDK-GTVHVFGLKVD 255 (359)
Q Consensus 200 g------~~i~iwd~~-~~~~~~~---~~~~~~~~~i~~~~~s~---~~~~l~~~~~d-g~i~iw~~~~~ 255 (359)
. . |.+|++. +++.... ... +...+..++|+| ||++|++++.+ +.|.+|+++..
T Consensus 276 ~~~~~~~~-i~v~~~~~~g~~~~~~~~~~~--~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 276 NKFELQGY-IAGFKLRDCGSIEKQLFLSPT--PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSTTSCCE-EEEEEECTTSCEEEEEEEEEC--SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCe-EEEEEECCCCCEEEeeeeeec--CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2 7 9999996 5665432 221 234566789999 89999998864 89999999864
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=3e-19 Score=165.78 Aligned_cols=233 Identities=9% Similarity=0.081 Sum_probs=156.8
Q ss_pred ceEEEEEccCCCEEEEecC----------CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCe
Q 018248 8 TIHHLALNQDHGCFATGTE----------TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNK 77 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~d----------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~ 77 (359)
.|.+++|||||++|+++++ +.|++||+++++......+ ...+..++|+|+++.++++. ++.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l----~~~~~~~~~SPDG~~la~~~-----~~~ 131 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL----PRPIQYLCWSPVGSKLAYVY-----QNN 131 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC----CSSBCCEEECSSTTCEEEEE-----TTE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec----CcccccceECCCCCEEEEEE-----CCe
Confidence 3889999999999988763 7899999998654211223 35678899999999999876 589
Q ss_pred EEEEECCCccEEeeec--cCcce-----------------eEEEEecceeEEE---ecC---------------------
Q 018248 78 VMIWDDHENRYLGELS--FRSEV-----------------KNVRLRRDRIVVV---LNQ--------------------- 114 (359)
Q Consensus 78 i~iwd~~~~~~~~~~~--~~~~v-----------------~~~~~~~~~~~~~---~d~--------------------- 114 (359)
|++|++.+++...... +...| .+++|+|||+.++ .|.
T Consensus 132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence 9999998887655432 22212 4899999998887 331
Q ss_pred -------------eEEEEEcccceee---e-----eEeccCCCceeeeeecCCCccEEEecCCCC--eeEEEEe----cC
Q 018248 115 -------------KVYVYNFTDLKLV---D-----QIETVVNPTGLCDVSQNAGPMVMACPGLLK--GQVRVED----YG 167 (359)
Q Consensus 115 -------------~i~i~d~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d--~~v~~~~----~~ 167 (359)
.|++||+.+++.. . .+..+...+..++|+|++. +++......+ ..|.+|+ ..
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~ 290 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQ 290 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSS
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCC
Confidence 7889999877642 1 1223555667889999954 2222111122 3466677 54
Q ss_pred CeeeE-Ee----eccccccc-----EEEEccCCcEEEE--EeCCCC-eEEEEEcCCCcEEEEeecCCCCcceEEEEecCC
Q 018248 168 TKKSK-YI----TAHASRIA-----SIAMTLDGRFVAT--ASSKGT-LIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSN 234 (359)
Q Consensus 168 ~~~~~-~~----~~~~~~i~-----~~~~s~~~~~l~~--~~~dg~-~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 234 (359)
..... .+ ..|...+. .++|+|||+.|+. ...+|. .|.+||+.+++ ...+.. +...+..+.++ +
T Consensus 291 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~--~~~~v~~~~~~-d 366 (719)
T 1z68_A 291 TWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS--GKWEAINIFRV-T 366 (719)
T ss_dssp SEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC--SSSCEEEEEEE-C
T ss_pred CCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc--CceEEEEEEEE-e
Confidence 43332 23 35666776 8999999996554 445553 16677776666 344543 34567787777 8
Q ss_pred CCEEEEEcCC-----CcEEEEEccC
Q 018248 235 AQWLAASSDK-----GTVHVFGLKV 254 (359)
Q Consensus 235 ~~~l~~~~~d-----g~i~iw~~~~ 254 (359)
++.|+..+.+ +..++|.+..
T Consensus 367 ~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 367 QDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CCEEEEEEecCCCCCceEEEEEEeC
Confidence 8777666554 7899999875
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=9.5e-18 Score=154.24 Aligned_cols=240 Identities=8% Similarity=-0.038 Sum_probs=161.1
Q ss_pred CCCceEEEEEccCCCEEEEe--c-CCceEEEEcCCCcceeeeecccCCCCcee---------EEEEe--ccCCE-EEEEe
Q 018248 5 DPITIHHLALNQDHGCFATG--T-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQ---------LVSML--FRSNI-ICLVN 69 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~--~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~-~~~~~ 69 (359)
|...|..++|++++.+++.. . ++...||....+... ..+. .|...+. ...++ |+++. +++++
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~l~-~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAE--ESAL-PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCE--EESS-CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCc--ceeC-CCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence 66789999999987777777 5 778999986443333 2332 3444444 44455 88888 77665
Q ss_pred cCCCCCCeEEEEECC--C-ccEEeeec-----cCcceeEEEEecceeEEE---ec----------CeEEEEEccc-----
Q 018248 70 SGPHQSNKVMIWDDH--E-NRYLGELS-----FRSEVKNVRLRRDRIVVV---LN----------QKVYVYNFTD----- 123 (359)
Q Consensus 70 ~~~~~d~~i~iwd~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~~~---~d----------~~i~i~d~~~----- 123 (359)
. .+..|.++++. . ++...... +...+.+++|+|||+.++ .+ ..|++||+.+
T Consensus 99 ~---~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 99 F---GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp T---TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred C---CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 3 25778888876 3 44333222 356788999999998777 34 5899999977
Q ss_pred -ceeeeeEe-ccCCCceeeeeecCCCccEEEecCC-----CCeeEEEEecCC-e---eeEEe-ecccccccEEEEccCCc
Q 018248 124 -LKLVDQIE-TVVNPTGLCDVSQNAGPMVMACPGL-----LKGQVRVEDYGT-K---KSKYI-TAHASRIASIAMTLDGR 191 (359)
Q Consensus 124 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~-----~d~~v~~~~~~~-~---~~~~~-~~~~~~i~~~~~s~~~~ 191 (359)
++. ..+. .+...+..++|+|+++.++++.... ....|++|+.+. . ....+ ..+...+..++|+|||+
T Consensus 176 ~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 176 RSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS 254 (662)
T ss_dssp GGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC
T ss_pred CCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe
Confidence 543 3443 4445566788999998744443111 125788887762 3 34444 44578899999999999
Q ss_pred EEEEEeCCCC-eEEEEEcCCCcEEEEeecCCCCcc--------eEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 018248 192 FVATASSKGT-LIRVFNTMDGSLLQEMRRGAERAE--------IYSLAFSSNAQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 192 ~l~~~~~dg~-~i~iwd~~~~~~~~~~~~~~~~~~--------i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 254 (359)
++++++.++. .|.+||..+++....... +... +..++|+|+++++++++. +.++||.++.
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~--~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~ 323 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRR--EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDP 323 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCC--SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEET
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccc--cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEEC
Confidence 8888888883 066666656665443332 2111 567899999999999998 9999996653
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=7e-17 Score=132.68 Aligned_cols=242 Identities=10% Similarity=0.168 Sum_probs=171.3
Q ss_pred CCCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecc---cCCCCceeEEEEeccCCEEEEEecCCCCCCeEE
Q 018248 4 PDPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFD---RNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~ 79 (359)
.+-..+.+++++++|+++++.. ++.|.+|+.+ ++........ .+|...+..+++......+.++..+ .++.|.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~--~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS--PTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG--GGCEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC--CCCEEE
Confidence 3456789999999999888877 8999999987 3332211110 1233456667774334444444421 258999
Q ss_pred EEECCCccEEeeec--cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEec--cCCCceeeeeecCCCccEEE
Q 018248 80 IWDDHENRYLGELS--FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIET--VVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 80 iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~ 152 (359)
+|| .+++.+..+. ....+.+++++|++.+++ .++.|.+||. +++.+..+.. +......+++++++. + ++
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~-l-~v 179 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQE-I-FI 179 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSE-E-EE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCC-E-EE
Confidence 999 6777777665 345789999999998776 4689999996 4566655542 233456778888764 3 33
Q ss_pred ecCCCCeeEEEEecCCeeeEEeecc--cccccEEEEccCCcEEEEEeCCC-CeEEEEEcCCCcEEEEeecCCCCcceEEE
Q 018248 153 CPGLLKGQVRVEDYGTKKSKYITAH--ASRIASIAMTLDGRFVATASSKG-TLIRVFNTMDGSLLQEMRRGAERAEIYSL 229 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg-~~i~iwd~~~~~~~~~~~~~~~~~~i~~~ 229 (359)
+ ...++.|++|+.+++.+..+..+ ...+..++++|+|+++++...++ . |.+|| .+++.+..+..+.....+.++
T Consensus 180 ~-~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~-i~~~~-~~g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 180 S-DNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-LTIFT-QDGQLISALESKVKHAQCFDV 256 (286)
T ss_dssp E-EGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE-EEEEC-TTSCEEEEEEESSCCSCEEEE
T ss_pred E-ECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE-EEEEC-CCCCEEEEEcccCCCCcceeE
Confidence 3 33578899999888777766543 35788999999999888887775 8 99999 467777777654333457899
Q ss_pred EecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 230 AFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 230 ~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
+++|+|+++++ +.++.|++|++....
T Consensus 257 ~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 257 ALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred EECCCCcEEEE-CCCCeEEEEEccccc
Confidence 99999987777 568999999987654
No 168
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.82 E-value=9.4e-17 Score=135.70 Aligned_cols=259 Identities=6% Similarity=0.022 Sum_probs=173.9
Q ss_pred CCceEEEEEccCCCEEEEec----------CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC-C
Q 018248 6 PITIHHLALNQDHGCFATGT----------ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH-Q 74 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~----------d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-~ 74 (359)
-..+...++ ||+.++... ++.|.+|++++++.. .+ ..+....|+|+++.+++++.... .
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~l-----~~~~~~~~SpDg~~la~~~~~~~~~ 83 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR---FI-----ENATMPRISPDGKKIAFMRANEEKK 83 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---EE-----ESCEEEEECTTSSEEEEEEEETTTT
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE---Ec-----ccCCCeEECCCCCEEEEEEeccCCC
Confidence 356778888 999887642 456899999876532 22 34567899999999988774210 1
Q ss_pred CCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE--e----------------------------cCeEEEEEcccc
Q 018248 75 SNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV--L----------------------------NQKVYVYNFTDL 124 (359)
Q Consensus 75 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~----------------------------d~~i~i~d~~~~ 124 (359)
...|.+|++.+++......... +..+.|+|+++.++ . ...|++||+.++
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred cceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 2358888988887766655555 99999999998776 2 257999999888
Q ss_pred eeeeeEeccCCCceeeeeecCCCccEEEecCCC-------CeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEe
Q 018248 125 KLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL-------KGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATAS 197 (359)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-------d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 197 (359)
+.+..+.. . .+..++|+|++ ++++..... ...|.+++ .+ ....+..+ ..+..+ +|||++|+.++
T Consensus 163 ~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d-~~-~~~~l~~~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 163 EVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE-DG-KEEKMFEK-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp EEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE-TT-EEEEEEEE-ESEEEE--EECSSCEEEEE
T ss_pred eEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC-CC-ceEEeccC-cceeeE--CCCCCEEEEEE
Confidence 76455554 3 67788999988 333321111 22455555 33 34445444 444444 99999888777
Q ss_pred CC--------CCeEEEEEcCCCcEEEEeecCCCCcceEE-EEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCC
Q 018248 198 SK--------GTLIRVFNTMDGSLLQEMRRGAERAEIYS-LAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSAS 268 (359)
Q Consensus 198 ~d--------g~~i~iwd~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 268 (359)
.+ .. |.+|| +++.. .+..+ +...+.. +.|+ |+ ++++++.++.++|| +.+++..
T Consensus 234 ~~~~~~~~~~~~-l~~~d--~~~~~-~l~~~-~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~---------- 295 (347)
T 2gop_A 234 KPEKKYMSEHNK-LYIYD--GKEVM-GILDE-VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK---------- 295 (347)
T ss_dssp CCSSSCCCSSCE-EEEEC--SSCEE-ESSTT-CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEE----------
T ss_pred ccccCCccccce-EEEEC--CCceE-ecccc-CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceE----------
Confidence 44 34 77777 55544 33322 4567886 9999 88 88999999999999 8843200
Q ss_pred CCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeE-EEEEeC
Q 018248 269 EPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSY-YKCEFD 337 (359)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i-~v~~~~ 337 (359)
. +....+.+..++|+| ..+++++.++.. .+|.++
T Consensus 296 -----------------------~----------~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 296 -----------------------P----------IAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp -----------------------E----------EECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred -----------------------E----------EecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 0 111235678899999 677777777765 888886
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=1.5e-16 Score=134.89 Aligned_cols=232 Identities=13% Similarity=0.121 Sum_probs=157.6
Q ss_pred EEEEccCCCEEEEec-----------CCceEEEEcCCCcceeeeecccC---CCCceeEEEEeccCCEEEEEecCCCCCC
Q 018248 11 HLALNQDHGCFATGT-----------ETGFRVYLSDPYKPIMRRDFDRN---PRGGTQLVSMLFRSNIICLVNSGPHQSN 76 (359)
Q Consensus 11 ~~~~s~~g~~l~~~~-----------d~~i~iw~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~~~~~d~ 76 (359)
.++|+|||++++++. ++.|.+||..+.+......+..+ +......++++++++.++++..+ .++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~--~~~ 131 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS--PAT 131 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES--SSE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC--CCC
Confidence 899999999998764 45699999987766544433101 12345678899999988877632 258
Q ss_pred eEEEEECCCccEEee-eccCcceeEEEEecce--eEEE--ecCeEEEEEccc-ceeeee------EeccCCCceeeeeec
Q 018248 77 KVMIWDDHENRYLGE-LSFRSEVKNVRLRRDR--IVVV--LNQKVYVYNFTD-LKLVDQ------IETVVNPTGLCDVSQ 144 (359)
Q Consensus 77 ~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~--~~~~--~d~~i~i~d~~~-~~~~~~------~~~~~~~~~~~~~~~ 144 (359)
.|.+||+.+++.+.. +..... ..+.+.|++ .+++ .||.+.+|++.. ++.... +.....++ .+..++
T Consensus 132 ~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 209 (361)
T 2oiz_A 132 SIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPAL 209 (361)
T ss_dssp EEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEE
T ss_pred eEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecc
Confidence 999999999998888 764332 235566765 3333 788888888854 444322 22222222 234466
Q ss_pred CCCccEEEecCCCCeeEEEEecCCeeeE---Eeec------c----cccccEEEEccCCcEEEEEeC-----------CC
Q 018248 145 NAGPMVMACPGLLKGQVRVEDYGTKKSK---YITA------H----ASRIASIAMTLDGRFVATASS-----------KG 200 (359)
Q Consensus 145 ~~~~~~l~~~g~~d~~v~~~~~~~~~~~---~~~~------~----~~~i~~~~~s~~~~~l~~~~~-----------dg 200 (359)
++...++.. .++.+.+++....... .+.. + ......++|+|+++.++++.. .+
T Consensus 210 ~g~~~~~~~---~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~ 286 (361)
T 2oiz_A 210 DKDKAHFVS---YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAA 286 (361)
T ss_dssp CSSEEEEEB---TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCS
T ss_pred cCCEEEEEe---CCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCc
Confidence 665544433 4678888776543222 1110 0 112234789999887777643 34
Q ss_pred CeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 018248 201 TLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 201 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 255 (359)
. |.+||+.+++.+..+..+ . +.+++|+|||++|++++. +.|.+||..++
T Consensus 287 ~-v~viD~~t~~~v~~i~~~--~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 287 E-IWVMDTKTKQRVARIPGR--D--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp E-EEEEETTTTEEEEEEECT--T--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred e-EEEEECCCCcEEEEEecC--C--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 6 999999999999999863 3 899999999999998887 99999999987
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=2e-16 Score=132.63 Aligned_cols=240 Identities=14% Similarity=0.085 Sum_probs=170.7
Q ss_pred CCceEEEEEccCCCEEEEec-C------------------------CceEEEEcCCCcceeeeecccCCCCceeEEEEec
Q 018248 6 PITIHHLALNQDHGCFATGT-E------------------------TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLF 60 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~-d------------------------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 60 (359)
-..+.+++++|+|+++++.. + +.|.+||.++++.. ..+..++-.....+++.+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL--QSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE--EEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE--eccCCCccCCceEEEECC
Confidence 46799999999999998888 5 36999998876654 333213445677888888
Q ss_pred cCCEEEEEecCCCCCCeEEEEECCCcc-EEeeec----------cCcceeEEEEec-ceeEEE--e--cCeEEEEEcccc
Q 018248 61 RSNIICLVNSGPHQSNKVMIWDDHENR-YLGELS----------FRSEVKNVRLRR-DRIVVV--L--NQKVYVYNFTDL 124 (359)
Q Consensus 61 ~~~~~~~~~~~~~~d~~i~iwd~~~~~-~~~~~~----------~~~~v~~~~~~~-~~~~~~--~--d~~i~i~d~~~~ 124 (359)
+++..+... .++.|++||..... .+..+. +-.....++++| ++.+++ . ++.|++|+ .++
T Consensus 101 ~g~l~v~d~----~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 101 DGNYWVTDV----ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp TSCEEEEET----TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred CCCEEEEEC----CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 777433333 46899999965442 444442 223688999999 777766 2 57899999 467
Q ss_pred eeeeeEeccC----------CCceeeeeecCCCccEEEecCCCCeeEEEEecC-CeeeEEee--cccccccEEEEccCCc
Q 018248 125 KLVDQIETVV----------NPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-TKKSKYIT--AHASRIASIAMTLDGR 191 (359)
Q Consensus 125 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~~~~~~~--~~~~~i~~~~~s~~~~ 191 (359)
+.+..+.... .....+++++++..++++ ...++.|++|+.+ ++.+..+. .+...+..++++| +.
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~--d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~ 252 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA--DRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF 252 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE--ETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE--ECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE
Confidence 7766664322 124678888885554444 4457889999887 77777763 4556788999999 44
Q ss_pred EEEEE-------eCCCCeEEEEEcCCCcEEEEeec-CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 192 FVATA-------SSKGTLIRVFNTMDGSLLQEMRR-GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 192 ~l~~~-------~~dg~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
.+++. ..+.. |++||..+++.+..+.. ..+...+..++++|+|.++++...++.|++|++....
T Consensus 253 ~~~~~g~~~v~~~~~~~-v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 253 LFAVNGKPYFGDQEPVQ-GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp EEEEECCCCTTCSCCCC-EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEECS
T ss_pred EEEeCCCEEeccCCCcE-EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCccc
Confidence 33333 33457 99999999999988742 1144678999999999888888899999999997643
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=1.1e-15 Score=125.53 Aligned_cols=238 Identities=13% Similarity=0.173 Sum_probs=165.1
Q ss_pred CCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeecc-------CcceeEEEE-ecceeEEE-e---cCe
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSF-------RSEVKNVRL-RRDRIVVV-L---NQK 115 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~v~~~~~-~~~~~~~~-~---d~~ 115 (359)
+|-.....+++.++++..+... .++.|.+||.. ++.+..+.. ...+..+++ .+++.+++ . ++.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~----~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADT----NNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEG----GGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CccCCCceEEECCCCCEEEEEC----CCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 3445567778877766444333 46899999976 666665531 246789999 47777666 3 789
Q ss_pred EEEEEcccceeeeeEec-cCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEee--cccccccEEEEccCCcE
Q 018248 116 VYVYNFTDLKLVDQIET-VVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYIT--AHASRIASIAMTLDGRF 192 (359)
Q Consensus 116 i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~ 192 (359)
|.+|| .+++.+..+.. .......+++.+++. + +++ ...++.|.+|+.+++.+..+. .+...+..++++|+|++
T Consensus 102 i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l-~v~-~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGATILQHPRGVTVDNKGR-I-IVV-ECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp EEEEC-TTSCEEEEECTTTCSCEEEEEECTTSC-E-EEE-ETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEE
T ss_pred EEEEC-CCCcEEEEecCccCCCceEEEEeCCCC-E-EEE-ECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCE
Confidence 99999 56776666643 223456778888774 3 333 335778999988877766664 34456889999999998
Q ss_pred EEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCC-cEEEEEccCCCCCCCCCccccCCCCC
Q 018248 193 VATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKG-TVHVFGLKVDSGSPGTSKLHSASEPN 271 (359)
Q Consensus 193 l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~~~~~~~~ 271 (359)
+++...++. |++||. +++.+..+....+...+..++++++|+++++...++ .|.+|+.+...
T Consensus 178 ~v~~~~~~~-i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~--------------- 240 (286)
T 1q7f_A 178 FISDNRAHC-VKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQL--------------- 240 (286)
T ss_dssp EEEEGGGTE-EEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCE---------------
T ss_pred EEEECCCCE-EEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCE---------------
Confidence 887777888 999996 566666665422235789999999999988887775 99999954221
Q ss_pred ccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 272 LSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
+. .+... .+...+..++++|+|+.+++ +.|+.|++|++..
T Consensus 241 ------------------~~-~~~~~-------~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 241 ------------------IS-ALESK-------VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp ------------------EE-EEEES-------SCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred ------------------EE-EEccc-------CCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 00 01100 11224678999999876655 6799999998764
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=1.3e-16 Score=133.70 Aligned_cols=247 Identities=10% Similarity=0.111 Sum_probs=169.4
Q ss_pred CCceeEEEEeccCCEEEEEecCCC--------------------CCCeEEEEECCCccEEeeec--cCcceeEEEEecce
Q 018248 50 RGGTQLVSMLFRSNIICLVNSGPH--------------------QSNKVMIWDDHENRYLGELS--FRSEVKNVRLRRDR 107 (359)
Q Consensus 50 ~~~v~~~~~~~~~~~~~~~~~~~~--------------------~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~ 107 (359)
-+.+..+++.++++.++....... .++.|.+||..+++.+..+. +-..+..++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 456777888887766554442200 12479999998898877665 33578899999999
Q ss_pred eEEE---ecCeEEEEEcccce-eeeeEe---------ccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEe
Q 018248 108 IVVV---LNQKVYVYNFTDLK-LVDQIE---------TVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYI 174 (359)
Q Consensus 108 ~~~~---~d~~i~i~d~~~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~ 174 (359)
.+++ .++.|++||..... .+..+. .+......++++|+...++++- +..++.|++|+.++..+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d-~~~~~~I~~~~~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSD-GYCNSRIVQFSPSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEE-CSSCCEEEEECTTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEe-CCCCCeEEEEcCCCCEEEEe
Confidence 8766 56899999974332 444442 1222345688888444444442 22478899998888777766
Q ss_pred ecc----------cccccEEEEccC-CcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEE--
Q 018248 175 TAH----------ASRIASIAMTLD-GRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAAS-- 241 (359)
Q Consensus 175 ~~~----------~~~i~~~~~s~~-~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-- 241 (359)
... -.....++++|+ +.++++...++. |++||..+++.+..+....+...+..++|+| +..+++.
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~ 259 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-IQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGK 259 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-EEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-EEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCC
Confidence 432 234789999998 777777777888 9999998899998886544566889999999 4333333
Q ss_pred -----cCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeec
Q 018248 242 -----SDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFG 316 (359)
Q Consensus 242 -----~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 316 (359)
..+..|++|++.+++.. ..+... ..+...+..++++
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~---------------------------------~~~~~~------~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEII---------------------------------DVFKPV------RKHFDMPHDIVAS 300 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEE---------------------------------EEECCS------SSCCSSEEEEEEC
T ss_pred EEeccCCCcEEEEEEcCCCeEE---------------------------------EEEcCC------CCccCCeeEEEEC
Confidence 34458999999877611 011100 1122456889999
Q ss_pred ccCCEEEEEecCCeEEEEEeCC
Q 018248 317 RQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 317 ~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
|+|..+++...++.|++|+++.
T Consensus 301 ~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 301 EDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp TTSEEEEEESSSCCEEEEEEEE
T ss_pred CCCCEEEEECCCCEEEEEeCCc
Confidence 9997777777899999998864
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=2.1e-16 Score=135.70 Aligned_cols=196 Identities=10% Similarity=-0.030 Sum_probs=137.4
Q ss_pred EEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEe
Q 018248 56 VSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIE 131 (359)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~ 131 (359)
.+|+|+++.+++.+... ....|.+||+.+++...... +...+..+.|+|+++.++ .++.|++||+.+++......
T Consensus 41 ~~~SpDg~~l~~~~~~~-g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFD-GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTT-SSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCC-CCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 67899999999888421 12369999999988777666 444555788999998877 46799999999887766665
Q ss_pred ccCCCceeee--eecCCCccEEEe---------------------cCCCCeeEEEEecCCeeeEEeecccccccEEEEcc
Q 018248 132 TVVNPTGLCD--VSQNAGPMVMAC---------------------PGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTL 188 (359)
Q Consensus 132 ~~~~~~~~~~--~~~~~~~~~l~~---------------------~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~ 188 (359)
.+...+.... +++++.. ++. ....+..|++++........+..+...+..++|+|
T Consensus 120 ~~~~~~~~~~~~~~~dg~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTK--LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRP 197 (388)
T ss_dssp CCTTEEEEEEEEECTTSSE--EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred chhhcccccceeECCCCCe--eccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECC
Confidence 5544333333 3566654 331 12235678888887777777777778899999999
Q ss_pred -CCcEEEEEeCC------CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcC-CC----cEEEEEccCCC
Q 018248 189 -DGRFVATASSK------GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSD-KG----TVHVFGLKVDS 256 (359)
Q Consensus 189 -~~~~l~~~~~d------g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg----~i~iw~~~~~~ 256 (359)
||+.|+....+ .. |.++|...++. ..+..+.....+..++|||||+.|+..+. ++ .|++||+.+++
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~-l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDAR-MWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCS-EEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred CCCCEEEEEEecCCCCCcce-EEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 99998877753 26 88888765544 34443211135788999999997765443 22 39999998876
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.78 E-value=6.7e-17 Score=150.23 Aligned_cols=194 Identities=12% Similarity=0.100 Sum_probs=134.9
Q ss_pred CceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cCc-----ceeEEEEecceeEEE--ec---------
Q 018248 51 GGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FRS-----EVKNVRLRRDRIVVV--LN--------- 113 (359)
Q Consensus 51 ~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~-----~v~~~~~~~~~~~~~--~d--------- 113 (359)
.....+.|++++..++. + |+.|++||+.+++....+. +.. ...++.|+|||+.++ .+
T Consensus 17 ~~~~~~~w~~dg~~~~~-~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYK-Q-----ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCCEEECSSSEEEEE-E-----TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred ccccccEECCCCcEEEE-c-----CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 34556788888754443 2 5899999999998877665 332 224588999999887 32
Q ss_pred -CeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEee--cccc-----------
Q 018248 114 -QKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYIT--AHAS----------- 179 (359)
Q Consensus 114 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~--~~~~----------- 179 (359)
+.+.+||+.+++.. .+..+...+...+|+|+++. ||++ .++.|++|+..+.....+. ++..
T Consensus 91 ~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~--la~~--~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 91 TASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHK--LAYV--WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVY 165 (740)
T ss_dssp EEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTC--EEEE--ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHH
T ss_pred ceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCE--EEEE--ECCeEEEEECCCCceEEEcCCCCccceecCcccccc
Confidence 67889999888754 35555667888999999998 4442 3678999887665444443 2221
Q ss_pred ------cccEEEEccCCcEEEEEeCCC------------------------------------CeEEEEEcCC---Cc--
Q 018248 180 ------RIASIAMTLDGRFVATASSKG------------------------------------TLIRVFNTMD---GS-- 212 (359)
Q Consensus 180 ------~i~~~~~s~~~~~l~~~~~dg------------------------------------~~i~iwd~~~---~~-- 212 (359)
....+.|||||+.||.++.|. . |++||+.+ ++
T Consensus 166 ~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~-l~v~d~~~~~~~~~~ 244 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK-FFVVNTDSLSSVTNA 244 (740)
T ss_dssp HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE-EEEEETTSCCSSSCC
T ss_pred cchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE-EEEEECCCCCCCCcc
Confidence 123589999999999875321 4 78899888 73
Q ss_pred EEEEeecC----CCCcceEEEEecCCCCEEEEEcC----CCcEEEEEccCCC
Q 018248 213 LLQEMRRG----AERAEIYSLAFSSNAQWLAASSD----KGTVHVFGLKVDS 256 (359)
Q Consensus 213 ~~~~~~~~----~~~~~i~~~~~s~~~~~l~~~~~----dg~i~iw~~~~~~ 256 (359)
....+... .+...+..++|||||+.++.... +..|++||+.+++
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 245 TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 22233321 14567999999999997665532 3469999999876
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.77 E-value=7.3e-16 Score=129.47 Aligned_cols=236 Identities=12% Similarity=0.090 Sum_probs=154.9
Q ss_pred CCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 6 PITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
...|.+++|++++..++... ++.++.|.. +.. ..+. ++...+..+++.++++..+... .++.|.+||..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~-~~~~~~~~~~~~~~g~l~~~~~----~~~~i~~~d~~ 74 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTITA---EPW--LEIS-KKGLQLEGLNFDRQGQLFLLDV----FEGNIFKINPE 74 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---EEE--EEEE-SSCCCEEEEEECTTSCEEEEET----TTCEEEEECTT
T ss_pred ccccceeeecCCccceeEEeecccCccccc---cee--EEEe-ccCccccCcEECCCCCEEEEEC----CCCEEEEEeCC
Confidence 45688999999988876666 889999932 222 2222 3455567788887776333333 46899999998
Q ss_pred CccEEeee-ccCcceeEEEEecceeEEE---ec----CeEEEEEcccceeeeeEe--ccCCCceeeeeecCCCccEEEec
Q 018248 85 ENRYLGEL-SFRSEVKNVRLRRDRIVVV---LN----QKVYVYNFTDLKLVDQIE--TVVNPTGLCDVSQNAGPMVMACP 154 (359)
Q Consensus 85 ~~~~~~~~-~~~~~v~~~~~~~~~~~~~---~d----~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ 154 (359)
+++..... .+...+.+++++|++.+++ .+ +.|.+||..+++....+. .....+..+++++++. +++...
T Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~ 153 (333)
T 2dg1_A 75 TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDF 153 (333)
T ss_dssp TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEEC
T ss_pred CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEec
Confidence 88766554 3567899999999998776 22 589999987765443332 1233456678888764 333321
Q ss_pred CC----CCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEE-eCCCCeEEEEEcCC-CcEEEEe-----ecCCCC
Q 018248 155 GL----LKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATA-SSKGTLIRVFNTMD-GSLLQEM-----RRGAER 223 (359)
Q Consensus 155 g~----~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~~i~iwd~~~-~~~~~~~-----~~~~~~ 223 (359)
.. ..+.|..++..+.....+......+..++|+|+|+.|+.+ +.++. |.+||+.+ +..+..+ ......
T Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-i~~~d~~~~g~~~~~~~~~~~~~~~~~ 232 (333)
T 2dg1_A 154 RGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR-LHRIALEDDGVTIQPFGATIPYYFTGH 232 (333)
T ss_dssp CCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECTTSSSEEEEEEEEEEECCSS
T ss_pred cccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCe-EEEEEecCCCcCcccccceEEEecCCC
Confidence 10 1355655665554444444444567899999999866544 45677 99999864 3332211 100011
Q ss_pred cceEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 018248 224 AEIYSLAFSSNAQWLAASSDKGTVHVFGLK 253 (359)
Q Consensus 224 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 253 (359)
..+..++++++|+++++...++.|.+||.+
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 367889999999988887778899999874
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.77 E-value=5.2e-16 Score=143.61 Aligned_cols=245 Identities=10% Similarity=0.042 Sum_probs=169.9
Q ss_pred CCCceEEEEEccCCCEEEEec-C-C----ceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC-----
Q 018248 5 DPITIHHLALNQDHGCFATGT-E-T----GFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH----- 73 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d-~----~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~----- 73 (359)
|...+..++|||||++||.+. + | .|++||+++++.... .+. ...+..++|+++++.+++++....
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~~---~~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VLE---RVKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EEE---EECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-ccc---CcccceEEEEeCCCEEEEEEECCcccccc
Confidence 334688999999999998876 2 3 799999998765432 221 223567899999999998874210
Q ss_pred -------CCCeEEEEECCCccE----Eeeec-cCcceeEEEEecceeEEE---e-----cCeEEEEEccc------ce-e
Q 018248 74 -------QSNKVMIWDDHENRY----LGELS-FRSEVKNVRLRRDRIVVV---L-----NQKVYVYNFTD------LK-L 126 (359)
Q Consensus 74 -------~d~~i~iwd~~~~~~----~~~~~-~~~~v~~~~~~~~~~~~~---~-----d~~i~i~d~~~------~~-~ 126 (359)
....|++|++.+++. +.... +...+..+.|+|+|++++ . +..|++||+.+ ++ .
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 023499999988762 22222 345578999999998887 2 57899999976 43 3
Q ss_pred eeeEeccCCCceeeeeecCCCccEEEecCC-CCeeEEEEecCCee---eEEeecccc--cccEEEEccCCcEEEEEeCCC
Q 018248 127 VDQIETVVNPTGLCDVSQNAGPMVMACPGL-LKGQVRVEDYGTKK---SKYITAHAS--RIASIAMTLDGRFVATASSKG 200 (359)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~d~~v~~~~~~~~~---~~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg 200 (359)
...+..+..... ..++++++.+++.+... ..+.|.+++..... .+.+..|.. .+..++|++++.++++...++
T Consensus 279 ~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 279 WVKLIDNFEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp CEEEECSSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred eEEeeCCCCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 555555554443 35888888766554211 23467777776532 355555544 688899998888888888887
Q ss_pred C-eEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEE-c---CCCcEEEEEccCCC
Q 018248 201 T-LIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAAS-S---DKGTVHVFGLKVDS 256 (359)
Q Consensus 201 ~-~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~---~dg~i~iw~~~~~~ 256 (359)
. .|.+||+.+++.+..+.. +.+.+..+.++|+++.++.. + ..++|++||+.+++
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPL--EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEEETTTCCEEEEECC--CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEEECCCCCEEEecCC--CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4 156678777887777765 46788999999999766533 2 34789999998765
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=3.1e-16 Score=134.86 Aligned_cols=201 Identities=7% Similarity=-0.063 Sum_probs=135.5
Q ss_pred eeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCccee-EEEEecceeEEE---ecCeEEEEEcccceeee
Q 018248 53 TQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVK-NVRLRRDRIVVV---LNQKVYVYNFTDLKLVD 128 (359)
Q Consensus 53 v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~ 128 (359)
+..++++|+++.++++.... .+..|.+||+.+++............ .+.|+|+++.++ .++.|++||+.+++...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~-g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFD-GNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eecCcCCCCCCEEEEEEecC-CCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 56678899999988876432 24589999998887655544443433 488999998876 56689999998876655
Q ss_pred eEeccCCCcee-------------------eeeecCCCccEEEe--cCCCCeeEEEEecCCeeeEEeecccccccEEEEc
Q 018248 129 QIETVVNPTGL-------------------CDVSQNAGPMVMAC--PGLLKGQVRVEDYGTKKSKYITAHASRIASIAMT 187 (359)
Q Consensus 129 ~~~~~~~~~~~-------------------~~~~~~~~~~~l~~--~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s 187 (359)
....+...... ..++|+++.+++.. .+..+..|++++........+..+...+..+.|+
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~s 196 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYR 196 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceEC
Confidence 44433321111 34567666532221 0135678888887766666666677788999999
Q ss_pred c-CCcEEEEEeCC------CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC-----CcEEEEEccCC
Q 018248 188 L-DGRFVATASSK------GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK-----GTVHVFGLKVD 255 (359)
Q Consensus 188 ~-~~~~l~~~~~d------g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~ 255 (359)
| +++.|+..+.+ .. |.+||+..++.. .+..+.....+..++|+|||++|+.++.+ +.|++||+.++
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~-l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDAR-MWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCC-CEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred CCCCCEEEEEecCCCCCCCce-EEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC
Confidence 9 88877766543 35 899998766543 33322112368889999999988776543 44999999876
Q ss_pred C
Q 018248 256 S 256 (359)
Q Consensus 256 ~ 256 (359)
+
T Consensus 275 ~ 275 (396)
T 3c5m_A 275 E 275 (396)
T ss_dssp C
T ss_pred C
Confidence 5
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=1.9e-16 Score=145.60 Aligned_cols=250 Identities=10% Similarity=0.064 Sum_probs=161.0
Q ss_pred CCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cCccee---------EEEEe--cceeE-EE--e
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FRSEVK---------NVRLR--RDRIV-VV--L 112 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~---------~~~~~--~~~~~-~~--~ 112 (359)
+|...+..++++ ++.++++......++...||....+.....+. +...+. ...|+ ||++. ++ .
T Consensus 21 ~~~~~~~~~~~s--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~ 98 (662)
T 3azo_A 21 SRSGRPACVGAV--GDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH 98 (662)
T ss_dssp HTCSCCEEEEEE--TTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred hcCCccceeEEc--CCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence 577777777776 55676666411146889999854444444454 555555 66666 99987 66 3
Q ss_pred --cCeEEEEEcc--cceeeeeEec-----cCCCceeeeeecCCCccEEEecCCCC----------eeEEEEecCC-----
Q 018248 113 --NQKVYVYNFT--DLKLVDQIET-----VVNPTGLCDVSQNAGPMVMACPGLLK----------GQVRVEDYGT----- 168 (359)
Q Consensus 113 --d~~i~i~d~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~g~~d----------~~v~~~~~~~----- 168 (359)
+..|+++++. .......+.. +...+..++|+|+++.++.+. .+ ..|++|+..+
T Consensus 99 ~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 99 FGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMA---EEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp TTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEE---EEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred CCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEE---ecccCCCCCCceeEEEEEECCCCcccc
Confidence 4567777764 2033344443 344566789999998744333 23 5788888887
Q ss_pred -eeeEEee-cccccccEEEEccCCcEEEEEeCCC--------CeEEEEEcC-CC--cEEEEeecCCCCcceEEEEecCCC
Q 018248 169 -KKSKYIT-AHASRIASIAMTLDGRFVATASSKG--------TLIRVFNTM-DG--SLLQEMRRGAERAEIYSLAFSSNA 235 (359)
Q Consensus 169 -~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg--------~~i~iwd~~-~~--~~~~~~~~~~~~~~i~~~~~s~~~ 235 (359)
.....+. .+...+..++|||||++|+.++.++ . |++||+. ++ .....+..+ +...+..++|+|||
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~-i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spdg 253 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTE-LKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPDG 253 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEE-EEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTTS
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcE-EEEEEECCCCcccccEEeCCC-CCceEcceEECCCC
Confidence 6667776 6677888999999999999887553 5 9999998 56 133333322 45689999999999
Q ss_pred CEEEEEcCCCc--EEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEe
Q 018248 236 QWLAASSDKGT--VHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLV 313 (359)
Q Consensus 236 ~~l~~~~~dg~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 313 (359)
+++++++.++. |.+||+.+++.... . ........+.|. -.+..+
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~~~~l----~----------------------~~~~~~~~p~w~--------~~~~~~ 299 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGAATQL----C----------------------RREEEFAGPLWT--------PGMRWF 299 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCCEEES----S----------------------CCSSBSSCCCCS--------TTCCSE
T ss_pred eEEEEECCCCCeEEEEEECCCCceeec----c----------------------cccccccCcccc--------ccCceE
Confidence 98888888884 55555544431100 0 000000000000 013458
Q ss_pred eecccCCEEEEEecCCeEEEEEeCCC
Q 018248 314 GFGRQNNTIVIVGLDGSYYKCEFDPM 339 (359)
Q Consensus 314 ~~s~~~~~l~~~~~dg~i~v~~~~~~ 339 (359)
+|+|+++.+++++. |.+++|.++..
T Consensus 300 ~~~~~~~~~~~~~~-~~~~l~~~d~~ 324 (662)
T 3azo_A 300 APLANGLIAVVHGK-GAAVLGILDPE 324 (662)
T ss_dssp EECTTSCEEEEEBS-SSCEEEEEETT
T ss_pred eEeCCCEEEEEEEc-CccEEEEEECC
Confidence 89999999999998 99999988764
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.75 E-value=7.7e-15 Score=122.78 Aligned_cols=218 Identities=10% Similarity=0.064 Sum_probs=151.4
Q ss_pred CCceEEEEcCCCcceeeeecc-cCC--CCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEE
Q 018248 26 ETGFRVYLSDPYKPIMRRDFD-RNP--RGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVR 102 (359)
Q Consensus 26 d~~i~iw~~~~~~~~~~~~~~-~~h--~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~ 102 (359)
+++|.+||.++++........ .+. ......+.+ +++.+.++.. .++.|.+||..+++.+.++........++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~---~~~~v~viD~~t~~~~~~i~~~~~p~~i~ 90 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVN---NSHVIFAIDINTFKEVGRITGFTSPRYIH 90 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEG---GGTEEEEEETTTCCEEEEEECCSSEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEc---CCCEEEEEECcccEEEEEcCCCCCCcEEE
Confidence 688999999986543211000 011 122333443 4566655554 35899999999999999887667789999
Q ss_pred EecceeEEE-e--cCeEEEEEcccceeeeeEeccCC-----CceeeeeecCCCccEEEecCCCCeeEEEEecC-CeeeEE
Q 018248 103 LRRDRIVVV-L--NQKVYVYNFTDLKLVDQIETVVN-----PTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-TKKSKY 173 (359)
Q Consensus 103 ~~~~~~~~~-~--d~~i~i~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~~~~~ 173 (359)
+++++.+.+ . ++.|.+||..+++....+..... ....+++ +++.++++. ...++.|.+++.. .+....
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~-~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNC-WSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEE-CTTCCEEEEEETTTTEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEc-CCCCCEEEEEECCCCeEEEE
Confidence 988886665 3 78999999999988877765440 2234555 455544443 2136788887665 455555
Q ss_pred eecccccccEEEEccCCcEEEEEeCC----------CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcC
Q 018248 174 ITAHASRIASIAMTLDGRFVATASSK----------GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSD 243 (359)
Q Consensus 174 ~~~~~~~i~~~~~s~~~~~l~~~~~d----------g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 243 (359)
+.. ......++++|+|++++++..+ +. |.++|..+++....+... ....+..++|+|+++.|.++..
T Consensus 168 i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~-v~~id~~t~~v~~~~~~~-~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 168 LTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS-LYRIDAETFTVEKQFKFK-LGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE-EEEEETTTTEEEEEEECC-TTCCCEEEEECTTSCEEEEESS
T ss_pred EEc-CCCccceEEcCCCCEEEEECCCccCCccccCCce-EEEEECCCCeEEEEEecC-CCCCceeEEEecCCCEEEEEcc
Confidence 544 3345789999999977776554 67 999999999887777542 1236899999999999988765
Q ss_pred CCcEEEEEccCCC
Q 018248 244 KGTVHVFGLKVDS 256 (359)
Q Consensus 244 dg~i~iw~~~~~~ 256 (359)
.|.+||..+++
T Consensus 245 --~v~~~d~~t~~ 255 (328)
T 3dsm_A 245 --DIWRMPVEADR 255 (328)
T ss_dssp --SEEEEETTCSS
T ss_pred --EEEEEECCCCc
Confidence 89999998766
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.74 E-value=1.3e-15 Score=129.14 Aligned_cols=266 Identities=13% Similarity=0.065 Sum_probs=172.5
Q ss_pred cCCCEEEEec-------CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEec-------CCCCCCeEEEE
Q 018248 16 QDHGCFATGT-------ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNS-------GPHQSNKVMIW 81 (359)
Q Consensus 16 ~~g~~l~~~~-------d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~-------~~~~d~~i~iw 81 (359)
++++++.+.. |+.|.+||.++++... .+. .+..+ .++++++++.++++.. +. .++.|.+|
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~--~i~-~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~-~~~~v~v~ 86 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLG--MVP-TAFNG--HVQVSNDGKKIYTMTTYHERITRGK-RSDVVEVW 86 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEE--EEE-CCEEE--EEEECTTSSEEEEEEEEETTSSSSC-EEEEEEEE
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEE--Eec-CCCCC--ceEECCCCCEEEEEEecccccccCC-CCCEEEEE
Confidence 3566665532 5689999998876553 333 22333 7889999998887752 11 25789999
Q ss_pred ECCCccEEeeec-c------CcceeEEEEecceeEEE---e--cCeEEEEEcccceeeee-EeccCCCceeeeeecCCCc
Q 018248 82 DDHENRYLGELS-F------RSEVKNVRLRRDRIVVV---L--NQKVYVYNFTDLKLVDQ-IETVVNPTGLCDVSQNAGP 148 (359)
Q Consensus 82 d~~~~~~~~~~~-~------~~~v~~~~~~~~~~~~~---~--d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 148 (359)
|..+++.+.++. . ......++++|+|++++ . ++.|.+||+.+++.+.. +.... ...+.+.|++..
T Consensus 87 d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~ 164 (361)
T 2oiz_A 87 DADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPR 164 (361)
T ss_dssp ETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSS
T ss_pred ECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCe
Confidence 999999888876 2 24577899999998876 2 57899999999988777 54321 122456676654
Q ss_pred cEEEecCCCCeeEEEEecC--CeeeEE------eecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcE--EEEee
Q 018248 149 MVMACPGLLKGQVRVEDYG--TKKSKY------ITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSL--LQEMR 218 (359)
Q Consensus 149 ~~l~~~g~~d~~v~~~~~~--~~~~~~------~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~--~~~~~ 218 (359)
.+++. +.||.+.++... ++.... +.....+ ..+.++|++..++..+.++. |.++|+..... ...+.
T Consensus 165 ~~~~~--~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~-v~v~d~~~~~~~~~~~~~ 240 (361)
T 2oiz_A 165 SFMTI--CGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGN-VYSADFSGDEVKVDGPWS 240 (361)
T ss_dssp EEEEE--ETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSE-EEEEECSSSSCEEEEEEE
T ss_pred eEEEE--CCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCe-EEEEEecCCCceeccccc
Confidence 44443 246777665443 333211 1122222 23345678888888888898 99999875542 22221
Q ss_pred cCC--------CCcceEEEEecCCCCEEEEEcC-----------CCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCc
Q 018248 219 RGA--------ERAEIYSLAFSSNAQWLAASSD-----------KGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSA 279 (359)
Q Consensus 219 ~~~--------~~~~i~~~~~s~~~~~l~~~~~-----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (359)
... .+.....++|+|+++.++++.. .+.|.+||+.+.+..
T Consensus 241 ~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v--------------------- 299 (361)
T 2oiz_A 241 LLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV--------------------- 299 (361)
T ss_dssp SCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEE---------------------
T ss_pred ccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEE---------------------
Confidence 100 0111223789999888776543 347999999886511
Q ss_pred eeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 280 ISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
..+..+. +..++|+|||++|++++. +.|.+|+...
T Consensus 300 ---------------------~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 300 ---------------------ARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp ---------------------EEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred ---------------------EEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 1122223 678999999999999887 9999997765
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.73 E-value=3.6e-15 Score=137.64 Aligned_cols=279 Identities=9% Similarity=0.042 Sum_probs=174.2
Q ss_pred ccCCCEEEEec-CC---ceEEEEcC--CCcceeeee---cccCCCCceeEEEEeccCCEEEEEec--CCCCCCeEEEEEC
Q 018248 15 NQDHGCFATGT-ET---GFRVYLSD--PYKPIMRRD---FDRNPRGGTQLVSMLFRSNIICLVNS--GPHQSNKVMIWDD 83 (359)
Q Consensus 15 s~~g~~l~~~~-d~---~i~iw~~~--~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~~~~~~--~~~~d~~i~iwd~ 83 (359)
+|+|++++... ++ .-.+|..+ .++...... +..+|...+..++|+|+++.+++... +. .+..|++||+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~-~~~~i~v~dl 154 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAA-DEAVLHVIDV 154 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTC-SCCEEEEEET
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCC-ceEEEEEEEC
Confidence 48999987776 43 34555543 333322222 11245556888899999999887653 22 3579999999
Q ss_pred CCccEE-eeeccCcceeEEEEecceeEEE---ecCe-------------EEEEEcccce----eeeeEeccCCCceeeee
Q 018248 84 HENRYL-GELSFRSEVKNVRLRRDRIVVV---LNQK-------------VYVYNFTDLK----LVDQIETVVNPTGLCDV 142 (359)
Q Consensus 84 ~~~~~~-~~~~~~~~v~~~~~~~~~~~~~---~d~~-------------i~i~d~~~~~----~~~~~~~~~~~~~~~~~ 142 (359)
.+++.+ ...-.......++|+|||+.++ .+.. |++|++.+++ .+.....+...+..+.+
T Consensus 155 ~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 155 DSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp TTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred CCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 999865 2111111226899999998777 3433 9999997765 22222223345667889
Q ss_pred ecCCCccEEEecCC-CCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEe---CCCCeEEEEEcCCCcE--EEE
Q 018248 143 SQNAGPMVMACPGL-LKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATAS---SKGTLIRVFNTMDGSL--LQE 216 (359)
Q Consensus 143 ~~~~~~~~l~~~g~-~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~~i~iwd~~~~~~--~~~ 216 (359)
+|+++.+++..... ....|++++......+.+..+...+....+ ++|.+++... .++. |.+||+.+++. ...
T Consensus 235 SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~-l~~~d~~~~~~~~~~~ 312 (695)
T 2bkl_A 235 SRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQR-VFEVDPAKPARASWKE 312 (695)
T ss_dssp CTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCE-EEEEBTTBCSGGGCEE
T ss_pred CCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCE-EEEEeCCCCCccCCeE
Confidence 99998755443211 123566665544456666666666777766 6676444443 2467 99999877653 223
Q ss_pred eecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEec
Q 018248 217 MRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSS 296 (359)
Q Consensus 217 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (359)
+..+.....+..++|+ ++.++++...|+..+||.+......
T Consensus 313 l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~-------------------------------------- 353 (695)
T 2bkl_A 313 IVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKP-------------------------------------- 353 (695)
T ss_dssp EECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCE--------------------------------------
T ss_pred EecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCe--------------------------------------
Confidence 3322224568889998 7788888999999888877632100
Q ss_pred ccceeEEeec-CCcEEEeeecccCCEEEEEec----CCeEEEEEeCC
Q 018248 297 KWSMAQFRLP-ENVQYLVGFGRQNNTIVIVGL----DGSYYKCEFDP 338 (359)
Q Consensus 297 ~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~----dg~i~v~~~~~ 338 (359)
...+.++ .+.+..++++|+++.|+.... .+.|++|++..
T Consensus 354 ---~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 354 ---VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp ---EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred ---eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 0001223 356677889999887774433 57888888764
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=8.6e-15 Score=135.51 Aligned_cols=279 Identities=9% Similarity=-0.023 Sum_probs=176.8
Q ss_pred cCCCEEEEec-C-Cc--eEEEEcC--CCcceeee---ecccCCCCceeEEEEeccCCEEEEEecCCC-CCCeEEEEECCC
Q 018248 16 QDHGCFATGT-E-TG--FRVYLSD--PYKPIMRR---DFDRNPRGGTQLVSMLFRSNIICLVNSGPH-QSNKVMIWDDHE 85 (359)
Q Consensus 16 ~~g~~l~~~~-d-~~--i~iw~~~--~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-~d~~i~iwd~~~ 85 (359)
|+|++++... + +. -.+|-.+ .++..... .+..+|...+..++|+|+++.+++...... ....|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8999887665 3 22 2455543 33322111 222234445778899999999988764210 123899999999
Q ss_pred ccEEeeeccCcceeEEEEecceeEEE---ecC----------------eEEEEEcccceee--eeEec--cCCCceeeee
Q 018248 86 NRYLGELSFRSEVKNVRLRRDRIVVV---LNQ----------------KVYVYNFTDLKLV--DQIET--VVNPTGLCDV 142 (359)
Q Consensus 86 ~~~~~~~~~~~~v~~~~~~~~~~~~~---~d~----------------~i~i~d~~~~~~~--~~~~~--~~~~~~~~~~ 142 (359)
++.+........+..++|+||++.++ .++ .|++|++.+++.. ..+.. +......+.+
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 98776433333477899999998776 333 3999999776522 22222 2333457889
Q ss_pred ecCCCccEEEecCCC--CeeEEEEecCC------e--eeEEeecccccccEEEEccCCcEEEEEeC----CCCeEEEEEc
Q 018248 143 SQNAGPMVMACPGLL--KGQVRVEDYGT------K--KSKYITAHASRIASIAMTLDGRFVATASS----KGTLIRVFNT 208 (359)
Q Consensus 143 ~~~~~~~~l~~~g~~--d~~v~~~~~~~------~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~~i~iwd~ 208 (359)
+|+++.+++.+.... +..|++++... . ....+..+...+.. .|+|+|+.|+..+. .+. |.+||+
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~-l~~~d~ 318 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYR-LINIDF 318 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCE-EEEEET
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCE-EEEEeC
Confidence 999987555442111 56888877754 2 46667666666655 58899987776654 235 899999
Q ss_pred CCCc--EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcE--EEEEccCCCCCCCCCccccCCCCCccCCCCCceeeee
Q 018248 209 MDGS--LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTV--HVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFR 284 (359)
Q Consensus 209 ~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i--~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (359)
.+++ ....+..+.....+..++|++++.++++...++.. .+|++.+++..
T Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~-------------------------- 372 (710)
T 2xdw_A 319 TDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALL-------------------------- 372 (710)
T ss_dssp TSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEE--------------------------
T ss_pred CCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEE--------------------------
Confidence 8764 12344432222368889999888888888888864 55555444310
Q ss_pred EeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEec----CCeEEEEEeCC
Q 018248 285 FIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGL----DGSYYKCEFDP 338 (359)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~v~~~~~ 338 (359)
..+..+.+.+..++++|+++.|+.... .+.++.|++..
T Consensus 373 ----------------~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 373 ----------------KIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp ----------------EEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred ----------------EecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 112334567788899999877664432 57888887754
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=6e-14 Score=124.96 Aligned_cols=276 Identities=12% Similarity=0.116 Sum_probs=184.1
Q ss_pred cCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC--CccEEeee
Q 018248 16 QDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH--ENRYLGEL 92 (359)
Q Consensus 16 ~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~--~~~~~~~~ 92 (359)
+.+.++++.. ++.|.++|.++++....... ...+..+.++++++++++++ .++.|.+||+. +++.+.++
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~----g~~p~~v~~SpDGr~lyv~~----~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT----GYAVHISRLSASGRYLFVIG----RDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC----SSCEEEEEECTTSCEEEEEE----TTSEEEEEETTSSSCCEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC----CCCccceEECCCCCEEEEEc----CCCeEEEEECCCCCCcEeEEE
Confidence 4444556666 89999999998766644433 34556888999999888776 67999999995 88888888
Q ss_pred ccCcceeEEEEe----cceeEEE----ecCeEEEEEcccceeeeeEeccC----------C-CceeeeeecCCCccEEEe
Q 018248 93 SFRSEVKNVRLR----RDRIVVV----LNQKVYVYNFTDLKLVDQIETVV----------N-PTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 93 ~~~~~v~~~~~~----~~~~~~~----~d~~i~i~d~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~l~~ 153 (359)
........++|+ |+|++++ .+++|.++|..+.+.+..+.... . .+..+..++++...+ +.
T Consensus 237 ~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~v-v~ 315 (567)
T 1qks_A 237 KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFI-VN 315 (567)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEE-EE
T ss_pred ecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEE-EE
Confidence 766667899999 6997776 77999999999999888876421 1 334556666655433 33
Q ss_pred cCCCCeeEEEEecCCe-e--eEEeecccccccEEEEccCCcEEEEEe-CCCCeEEEEEcCCCcEEEEeec-CC--CCcce
Q 018248 154 PGLLKGQVRVEDYGTK-K--SKYITAHASRIASIAMTLDGRFVATAS-SKGTLIRVFNTMDGSLLQEMRR-GA--ERAEI 226 (359)
Q Consensus 154 ~g~~d~~v~~~~~~~~-~--~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~~~~~~~~~~-~~--~~~~i 226 (359)
-...|.|.+.+.... . +..+ ........+.|+|+|+++++++ .++. |.++|+.+++.+..+.. +. |.+.-
T Consensus 316 -~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~-V~ViD~~t~kl~~~i~vgg~~Phpg~g 392 (567)
T 1qks_A 316 -VKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNK-LVVIDTKEGKLVAIEDTGGQTPHPGRG 392 (567)
T ss_dssp -ETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSSBCCTTC
T ss_pred -ecCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCe-EEEEECCCCcEEEEEeccCcCCCCccc
Confidence 346788888665432 1 2222 2234566889999999887766 4566 99999999998877765 32 32222
Q ss_pred EEEEecCCCCE-EEEEc-CCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEe
Q 018248 227 YSLAFSSNAQW-LAASS-DKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFR 304 (359)
Q Consensus 227 ~~~~~s~~~~~-l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (359)
..+ ++|++.. .++.. .++.|.++|..+.+... ..+..+ .++.
T Consensus 393 ~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~---------------------~~~kvv--------------~~i~ 436 (567)
T 1qks_A 393 ANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPD---------------------NAWKIL--------------DSFP 436 (567)
T ss_dssp EEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT---------------------TBTSEE--------------EEEE
T ss_pred eee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCcc---------------------ccCEEE--------------EEEe
Confidence 222 5787554 44543 46899999998743110 000001 1122
Q ss_pred ecCCcEEEeeecccCCEEEEEec-------CCeEEEEEeCCC
Q 018248 305 LPENVQYLVGFGRQNNTIVIVGL-------DGSYYKCEFDPM 339 (359)
Q Consensus 305 ~~~~~v~~~~~s~~~~~l~~~~~-------dg~i~v~~~~~~ 339 (359)
...+.-.-+..+|++++|++... .+.|.|+++...
T Consensus 437 ~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 437 ALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp CSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred cCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 22212133668999999998773 358999988754
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.72 E-value=5.2e-15 Score=124.95 Aligned_cols=225 Identities=11% Similarity=0.096 Sum_probs=150.3
Q ss_pred ceEEEEEccCCCEEEEec-C---Cc--eEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC--------
Q 018248 8 TIHHLALNQDHGCFATGT-E---TG--FRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH-------- 73 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~-d---~~--i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-------- 73 (359)
.+..++|||||++|+.++ + +. |.+|++++++....... .. +..+.|+|+++.+++++....
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~----~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA----KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE----SE-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC----CC-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 467899999999998877 3 33 77778876554433322 23 888899999998888763200
Q ss_pred ---------------CCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE-e--c------C-eEEEEEcccceeee
Q 018248 74 ---------------QSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV-L--N------Q-KVYVYNFTDLKLVD 128 (359)
Q Consensus 74 ---------------~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~--d------~-~i~i~d~~~~~~~~ 128 (359)
....|.+||+.+++.+..+... .+..+.|+|++ +++ . + . ...+|.+.+++. .
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~ 211 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-E 211 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-E
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-E
Confidence 1367999999888774444433 78899999999 555 2 1 2 334444435543 3
Q ss_pred eEeccCCCceeeeeecCCCccEEEecCC-----CCeeEEEEecCCeeeEEeecccccccE-EEEccCCcEEEEEeCCCCe
Q 018248 129 QIETVVNPTGLCDVSQNAGPMVMACPGL-----LKGQVRVEDYGTKKSKYITAHASRIAS-IAMTLDGRFVATASSKGTL 202 (359)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~-----~d~~v~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~~ 202 (359)
.+..+ .. ...++|+++.++++.... ....|.+++ .++.......+...+.. +.|+ ++ ++++++.++.
T Consensus 212 ~l~~~-~~--~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~- 284 (347)
T 2gop_A 212 KMFEK-VS--FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS- 284 (347)
T ss_dssp EEEEE-ES--EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE-
T ss_pred EeccC-cc--eeeECCCCCEEEEEEccccCCccccceEEEEC-CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc-
Confidence 33333 32 334489988754443111 134677777 55544444556677886 9999 88 8889999998
Q ss_pred EEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcE-EEEEcc
Q 018248 203 IRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTV-HVFGLK 253 (359)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i-~iw~~~ 253 (359)
++|| +.+++....+. +...|.+++|+| .++++++.++.. .||.++
T Consensus 285 ~~l~-~~~g~~~~~~~---~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 285 VNLY-IWDGEIKPIAK---GRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEE-EESSSEEEEEC---SSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred EEEE-EcCCceEEEec---CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 9999 87666544333 356899999999 677777777664 788776
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.71 E-value=3.3e-14 Score=117.31 Aligned_cols=230 Identities=10% Similarity=0.067 Sum_probs=156.2
Q ss_pred CCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEcccce
Q 018248 50 RGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLK 125 (359)
Q Consensus 50 ~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~ 125 (359)
......+.|.++++.+++++. .++.|..|+..++ ...+. +...+.++++++++.+++ .++.|.+||..+++
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~---~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDV---RQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEG---GGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred CccccCCeEeCCCCEEEEEeC---CCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 445567888888885555554 4689999998877 45554 667789999999998777 35789999987776
Q ss_pred eeeeEecc----CCCceeeeeecCCCccEEEec---CC-------------CCeeEEEEecCCeeeEEeecccccccEEE
Q 018248 126 LVDQIETV----VNPTGLCDVSQNAGPMVMACP---GL-------------LKGQVRVEDYGTKKSKYITAHASRIASIA 185 (359)
Q Consensus 126 ~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~---g~-------------~d~~v~~~~~~~~~~~~~~~~~~~i~~~~ 185 (359)
........ ...+..+++++++. ++++. |. ..+.|..++.. .....+..+......++
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~--l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGS--LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLA 178 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSC--EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCC--EEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEE
Confidence 54333221 12345678888775 34431 11 12355555555 34445555666778999
Q ss_pred EccCCcEEEEEeCCCCeEEEEEcC-CCcE---EEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCC
Q 018248 186 MTLDGRFVATASSKGTLIRVFNTM-DGSL---LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGT 261 (359)
Q Consensus 186 ~s~~~~~l~~~~~dg~~i~iwd~~-~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 261 (359)
|+|+++.|++.+.++. |.+|++. +++. ...+ . .+...+..++++++|+++++. ++.|.+|+.+ ++.
T Consensus 179 ~s~dg~~lv~~~~~~~-i~~~~~~~~g~~~~~~~~~-~-~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~---- 248 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNA-THRYCLNARGETEYQGVHF-T-VEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE---- 248 (296)
T ss_dssp ECTTSCEEEEETTTTE-EEEEEECSSSCEEEEEEEE-C-CSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE----
T ss_pred ECCCCCEEEEeCCCCe-EEEEEECCCCcCcCCCeEe-e-CCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCE----
Confidence 9999998877777788 9999986 5554 3344 2 244567889999999977766 7789999976 330
Q ss_pred CccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeee-cccCCEEEEEecCCeEEEEEeCCC
Q 018248 262 SKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGF-GRQNNTIVIVGLDGSYYKCEFDPM 339 (359)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~dg~i~v~~~~~~ 339 (359)
+..+..+.+ +..++| +|+++.|++++.+| +|.+++.
T Consensus 249 --------------------------------------~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~---l~~~~~~ 285 (296)
T 3e5z_A 249 --------------------------------------LGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE---FWSIETN 285 (296)
T ss_dssp --------------------------------------EEEEECSSC-CCEEEEESTTSCEEEEEETTE---EEEEECS
T ss_pred --------------------------------------EEEEECCCC-ceeEEEECCCCCEEEEEcCCe---EEEEEcc
Confidence 111334455 778999 58999999998874 4555553
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=1.9e-15 Score=139.55 Aligned_cols=244 Identities=11% Similarity=-0.017 Sum_probs=160.1
Q ss_pred CCCCceEEEEEccCCCEEEEec------CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC----
Q 018248 4 PDPITIHHLALNQDHGCFATGT------ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH---- 73 (359)
Q Consensus 4 ~h~~~v~~~~~s~~g~~l~~~~------d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~---- 73 (359)
.|...+..++|||||++||.+. +..|++||+++++......+. ......++|+++++.+++++....
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~---~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE---GGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS---CCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC---cccccceEEecCCCEEEEEEecCCCCCc
Confidence 3455789999999999998543 357999999987653111221 111256889999999988873210
Q ss_pred -----CCCeEEEEECCCcc----EEeeec-cCcceeEEEEecceeEEE---ecC----eEEEEEcccceeeeeEeccCCC
Q 018248 74 -----QSNKVMIWDDHENR----YLGELS-FRSEVKNVRLRRDRIVVV---LNQ----KVYVYNFTDLKLVDQIETVVNP 136 (359)
Q Consensus 74 -----~d~~i~iwd~~~~~----~~~~~~-~~~~v~~~~~~~~~~~~~---~d~----~i~i~d~~~~~~~~~~~~~~~~ 136 (359)
....|++|++.+++ .+.... +...+..+.|+|+|++++ .++ .|++++..+++ ...+..+...
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~ 273 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGA 273 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCc
Confidence 02349999998876 232322 445788999999998777 444 67777665444 3344444444
Q ss_pred ceeeeeecCCCccEEEec-CCCCeeEEEEecCCee---eEEeecc--cccccEEEEccCCcEEEEEeCCCCeEEEEEcC-
Q 018248 137 TGLCDVSQNAGPMVMACP-GLLKGQVRVEDYGTKK---SKYITAH--ASRIASIAMTLDGRFVATASSKGTLIRVFNTM- 209 (359)
Q Consensus 137 ~~~~~~~~~~~~~~l~~~-g~~d~~v~~~~~~~~~---~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~- 209 (359)
.....+ ++++ +++.+. +..++.|.+|+..... ...+..+ ...+..++|+ ++.++++...|+. .+||.+.
T Consensus 274 ~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~ 349 (695)
T 2bkl_A 274 KYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT-SEVRVATL 349 (695)
T ss_dssp CEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE-EEEEEEET
T ss_pred eEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeC
Confidence 444444 6666 544432 1135788888876533 2444433 4467888888 7778888888988 8887654
Q ss_pred CCcEEEEeecCCCCcceEEEEecCCCCEEEEEc----CCCcEEEEEccCCC
Q 018248 210 DGSLLQEMRRGAERAEIYSLAFSSNAQWLAASS----DKGTVHVFGLKVDS 256 (359)
Q Consensus 210 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~i~iw~~~~~~ 256 (359)
+++....+..+ ..+.+..++++|+++.|+... ..++|++||+.+++
T Consensus 350 ~g~~~~~l~~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 350 KGKPVRTVQLP-GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp TCCEEEECCCS-SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCCeeEEecCC-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 46666666532 256788899999998776332 34789999998765
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=2.2e-14 Score=116.62 Aligned_cols=175 Identities=13% Similarity=0.125 Sum_probs=138.6
Q ss_pred CCCeEEEEECCCccEEeeeccC--cceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEeccC-CCceeeeeecCCCcc
Q 018248 74 QSNKVMIWDDHENRYLGELSFR--SEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIETVV-NPTGLCDVSQNAGPM 149 (359)
Q Consensus 74 ~d~~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 149 (359)
.++.|.+||.++|+.+.++... ..+.++.+.|+|++++ .++.|+.||. +++.+..+..+. ..+..+.+.++++.
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~- 90 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNA- 90 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCE-
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCE-
Confidence 5799999998899999999833 4789999999999888 8889999998 899999988643 34556777777764
Q ss_pred EEEecCCCCeeEEEEecCCeeeEEeec------ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCC
Q 018248 150 VMACPGLLKGQVRVEDYGTKKSKYITA------HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAER 223 (359)
Q Consensus 150 ~l~~~g~~d~~v~~~~~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~ 223 (359)
+++.+..++.+..++.+++.+..+.. +......+++.++|+++++...++. |..||.. |+.+.++..+
T Consensus 91 -lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~-v~~~d~~-G~~~w~~~~~--- 164 (276)
T 3no2_A 91 -LVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSE-VREIAPN-GQLLNSVKLS--- 164 (276)
T ss_dssp -EEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTE-EEEECTT-SCEEEEEECS---
T ss_pred -EEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCE-EEEECCC-CCEEEEEECC---
Confidence 44322225667667778877766542 2234566788999999999999999 9999987 9999998753
Q ss_pred cceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 224 AEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 224 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
..+.++...++|+++++++.++.|..+|.++++
T Consensus 165 ~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 165 GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 356678888999999998888899999998876
No 188
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.70 E-value=1.6e-12 Score=107.15 Aligned_cols=232 Identities=9% Similarity=0.006 Sum_probs=154.3
Q ss_pred CCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC
Q 018248 5 DPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD 83 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 83 (359)
+...+.+++++++|+++++.. ++.|.+|+.+ ++.. ..... .+...+..+++.+++...+... .++.|..||.
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~----~~~~i~~~~~ 85 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLP-TPDAKVMCLTISSDGEVWFTEN----AANKIGRITK 85 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECS-STTCCEEEEEECTTSCEEEEET----TTTEEEEECT
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCC-cccCceeeEEECCCCCEEEeCC----CCCeEEEECC
Confidence 346799999999999888777 7889999988 4332 22221 2345667777776665433322 3588999997
Q ss_pred CCccEEeeec---cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeE-eccCCCceeeeeecCCCccEEEecCC
Q 018248 84 HENRYLGELS---FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQI-ETVVNPTGLCDVSQNAGPMVMACPGL 156 (359)
Q Consensus 84 ~~~~~~~~~~---~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~ 156 (359)
. ++. ..+. ....+.++++.+++.+++ .++.|.+||. +++..... .........+++.+++. ++++ ..
T Consensus 86 ~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~--~~ 159 (299)
T 2z2n_A 86 K-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFT--EN 159 (299)
T ss_dssp T-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEE--ET
T ss_pred C-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEE--eC
Confidence 5 432 2222 345788999999887766 3679999998 55443221 22233456677777663 3333 33
Q ss_pred CCeeEEEEecCCeeeEE-eecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCC
Q 018248 157 LKGQVRVEDYGTKKSKY-ITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNA 235 (359)
Q Consensus 157 ~d~~v~~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 235 (359)
.++.|..++.+++.... .......+..++++++|++.++...++. |.+||. +++... +........+.+++++++|
T Consensus 160 ~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 160 QNNAIGRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-IGRITT-SGEITE-FKIPTPNARPHAITAGAGI 236 (299)
T ss_dssp TTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEE-EECSSTTCCEEEEEECSTT
T ss_pred CCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-EEEECC-CCcEEE-EECCCCCCCceeEEECCCC
Confidence 45677777765443322 2334456789999999997776666777 999998 666443 3222234678999999999
Q ss_pred CEEEEEcCCCcEEEEEc
Q 018248 236 QWLAASSDKGTVHVFGL 252 (359)
Q Consensus 236 ~~l~~~~~dg~i~iw~~ 252 (359)
+++++...++.|.+||.
T Consensus 237 ~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 237 DLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CEEEEETTTTEEEEEET
T ss_pred CEEEeccCCceEEEECC
Confidence 97777667788999998
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.68 E-value=1.2e-12 Score=116.62 Aligned_cols=291 Identities=12% Similarity=0.082 Sum_probs=184.8
Q ss_pred CceEEEEEccCCCEEEEec-CCceEEEEcC--CCcceeeeecccCCCCceeEEEEe----ccCCEEEEEecCCCCCCeEE
Q 018248 7 ITIHHLALNQDHGCFATGT-ETGFRVYLSD--PYKPIMRRDFDRNPRGGTQLVSML----FRSNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~--~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~~~~~~~~~~~d~~i~ 79 (359)
..+..+.|+|||+++++++ ++.|.+||+. +.+.. ..+. -......++++ ++++.++++.. .++.|.
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~i~--~G~~P~~ia~s~~~~pDGk~l~v~n~---~~~~v~ 269 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AEIK--IGSEARSIETSKMEGWEDKYAIAGAY---WPPQYV 269 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EEEE--CCSEEEEEEECCSTTCTTTEEEEEEE---ETTEEE
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EEEe--cCCCCceeEEccccCCCCCEEEEEEc---cCCeEE
Confidence 4567899999999998888 8999999995 55444 3332 13345678888 58888877664 459999
Q ss_pred EEECCCccEEeeeccC------------cceeEEEEecceeEEE----ecCeEEEEEcccceeee--eEeccCCCceeee
Q 018248 80 IWDDHENRYLGELSFR------------SEVKNVRLRRDRIVVV----LNQKVYVYNFTDLKLVD--QIETVVNPTGLCD 141 (359)
Q Consensus 80 iwd~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~ 141 (359)
++|..+.+.+..+... ..+..+..++++..++ ..|.|.++|..+.+.+. .+.. ........
T Consensus 270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~-~~~~~d~~ 348 (567)
T 1qks_A 270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISA-ERFLHDGG 348 (567)
T ss_dssp EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC-CSSEEEEE
T ss_pred EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeec-cccccCce
Confidence 9999999988876521 2567788888754443 67999999986653322 2222 22334578
Q ss_pred eecCCCccEEEecCCCCeeEEEEecCC-eeeEEeec-ccc--cccEEE-EccCCc-EEEEEe-CCCCeEEEEEcCC----
Q 018248 142 VSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITA-HAS--RIASIA-MTLDGR-FVATAS-SKGTLIRVFNTMD---- 210 (359)
Q Consensus 142 ~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~-~~~--~i~~~~-~s~~~~-~l~~~~-~dg~~i~iwd~~~---- 210 (359)
|+|+++.++++.. .++.|.+++... +.+..+.. ... +-..+. ++|++. ..+++. .++. |.++|..+
T Consensus 349 ~~pdgr~~~va~~--~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~-Vsvid~~~~~~~ 425 (567)
T 1qks_A 349 LDGSHRYFITAAN--ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDS-VALIGTDPEGHP 425 (567)
T ss_dssp ECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSE-EEEEECCTTTCT
T ss_pred ECCCCCEEEEEeC--CCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCe-EEEecCCCCCCc
Confidence 8999887655542 466788865554 44444433 111 112233 578744 445554 4577 99999987
Q ss_pred ---CcEEEEeecCCCCcceEEEEecCCCCEEEEEcC-------CCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCce
Q 018248 211 ---GSLLQEMRRGAERAEIYSLAFSSNAQWLAASSD-------KGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAI 280 (359)
Q Consensus 211 ---~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (359)
.+.+.++... ...-..+..+|++++|.+... .+.|.|+|+.+.+.. |...
T Consensus 426 ~~~~kvv~~i~~~--g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~-----------------g~~~- 485 (567)
T 1qks_A 426 DNAWKILDSFPAL--GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGD-----------------GSDP- 485 (567)
T ss_dssp TTBTSEEEEEECS--CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCS-----------------SSCC-
T ss_pred cccCEEEEEEecC--CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCccccc-----------------ccCC-
Confidence 6678888753 223345778999999988663 358999999986210 0000
Q ss_pred eeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEec-----CCeEEEEEeCC
Q 018248 281 SSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGL-----DGSYYKCEFDP 338 (359)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----dg~i~v~~~~~ 338 (359)
.+..+.. ..|+ .+.-....+..+.|+|+|+.+.++.. ++.|.|++..+
T Consensus 486 -~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t 538 (567)
T 1qks_A 486 -EFKTLPI-------AEWA--GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKT 538 (567)
T ss_dssp -CEEEECH-------HHHH--TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred -CcEEecc-------cccc--ccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCC
Confidence 0000000 0000 00001235677999999999887743 78999975544
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.68 E-value=1.3e-13 Score=113.62 Aligned_cols=229 Identities=8% Similarity=0.007 Sum_probs=156.1
Q ss_pred CCceEEEEEccCCC-EEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC
Q 018248 6 PITIHHLALNQDHG-CFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD 83 (359)
Q Consensus 6 ~~~v~~~~~s~~g~-~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 83 (359)
.....+++|+|+|+ +++++. ++.|..|+.+++ . ..+. .+...+..+++.++++.++... .++.|.+||.
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~--~~~~-~~~~~~~~l~~~~dg~l~v~~~----~~~~i~~~d~ 97 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--L--SPEM-HPSHHQNGHCLNKQGHLIACSH----GLRRLERQRE 97 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--E--EEEE-SSCSSEEEEEECTTCCEEEEET----TTTEEEEECS
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--e--EEEE-CCCCCcceeeECCCCcEEEEec----CCCeEEEEcC
Confidence 44567899999998 667777 899999999875 2 2222 3466678888888777544333 3589999998
Q ss_pred CCccEEeeec-c----CcceeEEEEecceeEEEe--------------------cCeEEEEEcccceeeeeEeccCCCce
Q 018248 84 HENRYLGELS-F----RSEVKNVRLRRDRIVVVL--------------------NQKVYVYNFTDLKLVDQIETVVNPTG 138 (359)
Q Consensus 84 ~~~~~~~~~~-~----~~~v~~~~~~~~~~~~~~--------------------d~~i~i~d~~~~~~~~~~~~~~~~~~ 138 (359)
.+++...... . ...+.+++++|+|.+++. .+.|..++.. ++ ...+........
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~ 175 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPN 175 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCc
Confidence 8887554332 1 234678999999987773 2356666654 43 333444444556
Q ss_pred eeeeecCCCccEEEecCCCCeeEEEEecC--Cee---eEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcE
Q 018248 139 LCDVSQNAGPMVMACPGLLKGQVRVEDYG--TKK---SKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSL 213 (359)
Q Consensus 139 ~~~~~~~~~~~~l~~~g~~d~~v~~~~~~--~~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~ 213 (359)
.++++|+++.+ ++ ...++.|.+|+.. +.. ...+..+...+..++++++|+++++. ++. |.+||.. ++.
T Consensus 176 gi~~s~dg~~l--v~-~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~-v~~~~~~-g~~ 248 (296)
T 3e5z_A 176 GLAFLPSGNLL--VS-DTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG-VHVLTPD-GDE 248 (296)
T ss_dssp EEEECTTSCEE--EE-ETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE-EEEECTT-SCE
T ss_pred cEEECCCCCEE--EE-eCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe-EEEECCC-CCE
Confidence 78999988763 33 4457788887764 322 22333345567889999999976665 677 9999975 788
Q ss_pred EEEeecCCCCcceEEEEe-cCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 214 LQEMRRGAERAEIYSLAF-SSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 214 ~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
+..+.. +.. +.+++| +|+++.|++++.++ +.-++.++.+
T Consensus 249 ~~~~~~--~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 249 LGRVLT--PQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp EEEEEC--SSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred EEEEEC--CCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 777775 334 889999 68999888887764 4445555443
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=8e-14 Score=113.27 Aligned_cols=234 Identities=10% Similarity=-0.009 Sum_probs=155.9
Q ss_pred ceEEEEEccCCCEEE-Eec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 8 TIHHLALNQDHGCFA-TGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~-~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
...+++++++|++++ +.. ++.|.+|+..+...... .. .+...+..+++.++++ +.++. .++.|.+||...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~-~~--~~~~~p~~i~~~~~g~-l~v~~----~~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-PF--NGLYQPQGLAVDGAGT-VYVTD----FNNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC-CC--CSCCSCCCEEECTTCC-EEEEE----TTTEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE-ee--CCcCCcceeEECCCCC-EEEEc----CCCEEEEEeCCC
Confidence 678999999999777 545 78899998765432211 11 2234566777777666 44444 248999999765
Q ss_pred ccEEeeec--cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCee
Q 018248 86 NRYLGELS--FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQ 160 (359)
Q Consensus 86 ~~~~~~~~--~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~ 160 (359)
.... .+. ....+.++++++++.+++ .++.|.+|+..+................+++.+++. ++++. ..++.
T Consensus 97 ~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~--~~~~~ 172 (270)
T 1rwi_B 97 NNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTD--TDNNR 172 (270)
T ss_dssp SCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEE--GGGTE
T ss_pred ceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEE--CCCCE
Confidence 5433 332 235788999999987666 467899997644433222222223456678888775 44433 24668
Q ss_pred EEEEecCCeeeEEe-ecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEE
Q 018248 161 VRVEDYGTKKSKYI-TAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLA 239 (359)
Q Consensus 161 v~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 239 (359)
|.+++..+...... ..+...+..++++++|.++++...++. |.+||........ .... +...+.+++++++|++++
T Consensus 173 i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-v~~~~~~~~~~~~-~~~~-~~~~p~~i~~~~~g~l~v 249 (270)
T 1rwi_B 173 VVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-VVKLLAGSTTSTV-LPFT-GLNTPLAVAVDSDRTVYV 249 (270)
T ss_dssp EEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSC-EEEECTTCSCCEE-CCCC-SCSCEEEEEECTTCCEEE
T ss_pred EEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCc-EEEEcCCCCccee-eccC-CCCCceeEEECCCCCEEE
Confidence 88888776554433 223356789999999987777777888 9999986554332 2211 235789999999999888
Q ss_pred EEcCCCcEEEEEccCCC
Q 018248 240 ASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 240 ~~~~dg~i~iw~~~~~~ 256 (359)
+...++.|+++++...+
T Consensus 250 ~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 250 ADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEGGGTEEEEECCCGGG
T ss_pred EECCCCEEEEEcCCCcc
Confidence 88899999999998765
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=1.7e-13 Score=111.36 Aligned_cols=211 Identities=10% Similarity=0.045 Sum_probs=158.0
Q ss_pred cCCCEEEEec-CCceEEEEcCCCcceeeeecccCCC-CceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec
Q 018248 16 QDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPR-GGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS 93 (359)
Q Consensus 16 ~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~ 93 (359)
..+++|++++ ++.|.+||.++++....... +. ..+..+.+.++++.++ + .++.|..||. +++.+..+.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~---~~~~~~~~~~~~pdG~ilv--s----~~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPL---EKGWECNSVAATKAGEILF--S----YSKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEEC---CTTCCCCEEEECTTSCEEE--E----CBSEEEEECT-TSCEEEEEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCC---CccCCCcCeEECCCCCEEE--e----CCCCEEEECC-CCCEEEEEc
Confidence 3467888888 99999999988888766554 23 3577888888887666 4 3588999998 899999988
Q ss_pred c--CcceeEEEEecceeEEE---e-cCeEEEEEcccceeeeeEeccC------CCceeeeeecCCCccEEEecCCCCeeE
Q 018248 94 F--RSEVKNVRLRRDRIVVV---L-NQKVYVYNFTDLKLVDQIETVV------NPTGLCDVSQNAGPMVMACPGLLKGQV 161 (359)
Q Consensus 94 ~--~~~v~~~~~~~~~~~~~---~-d~~i~i~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~g~~d~~v 161 (359)
. ...+.++.+.++|++++ . ++.|..+|. +++.+..+.... .....++..++++. +++ ...++.|
T Consensus 73 ~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~--lv~-~~~~~~v 148 (276)
T 3no2_A 73 APAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNY--LVP-LFATSEV 148 (276)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCE--EEE-ETTTTEE
T ss_pred CCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCE--EEE-ecCCCEE
Confidence 3 35788999999999888 2 456777775 788777765321 12233455666653 444 4468899
Q ss_pred EEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCC----CCcceEEEEecCCCCE
Q 018248 162 RVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGA----ERAEIYSLAFSSNAQW 237 (359)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~ 237 (359)
..++.+++.+..+... ..+.++.+.++|+.+++++.++. |..+|..+|+.+.++.... ....+..++..++|.+
T Consensus 149 ~~~d~~G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~-v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i 226 (276)
T 3no2_A 149 REIAPNGQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHC-FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGL 226 (276)
T ss_dssp EEECTTSCEEEEEECS-SCCCEEEECTTSCEEEECBTTSE-EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCE
T ss_pred EEECCCCCEEEEEECC-CCccceeEcCCCCEEEEeCCCCe-EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCE
Confidence 9999888888777654 45677888999999998888888 9999999999999886421 1124788899999998
Q ss_pred EEEEc
Q 018248 238 LAASS 242 (359)
Q Consensus 238 l~~~~ 242 (359)
+++..
T Consensus 227 ~v~~~ 231 (276)
T 3no2_A 227 YICNW 231 (276)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88873
No 193
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=3.7e-13 Score=112.92 Aligned_cols=231 Identities=8% Similarity=0.029 Sum_probs=152.2
Q ss_pred CCCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC
Q 018248 5 DPITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD 83 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 83 (359)
+...+.+++|+|+|++++++. ++.|.+|+.++++...... .+...+..+++.++++..+.........+.|.+||.
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV---SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE---CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee---CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 345578999999999888887 8899999998765432221 235678888888877654443311000158999998
Q ss_pred CCccEEeeec---cCcceeEEEEecceeEEE-e--------cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEE
Q 018248 84 HENRYLGELS---FRSEVKNVRLRRDRIVVV-L--------NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVM 151 (359)
Q Consensus 84 ~~~~~~~~~~---~~~~v~~~~~~~~~~~~~-~--------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (359)
.+++....+. ....+.++.++|++.+++ . .+.|..+|..+++... +.........++++|+++.+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v 198 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWV 198 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEE
T ss_pred CCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEE
Confidence 8776543332 345689999999998777 2 2456666655444332 2222234567888998876554
Q ss_pred EecCCCCeeEEEEecC--CeeeEEe--------ecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCC
Q 018248 152 ACPGLLKGQVRVEDYG--TKKSKYI--------TAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGA 221 (359)
Q Consensus 152 ~~~g~~d~~v~~~~~~--~~~~~~~--------~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~ 221 (359)
+. ..++.|.+|+.. +.....+ .++ ..+..++++++|+++++...++. |.+||. +++.+..+....
T Consensus 199 ~~--~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~-v~~~d~-~g~~~~~~~~~~ 273 (333)
T 2dg1_A 199 TE--TTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGR-VLVFNK-RGYPIGQILIPG 273 (333)
T ss_dssp EE--GGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTE-EEEECT-TSCEEEEEECTT
T ss_pred Ee--CCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCE-EEEECC-CCCEEEEEEcCC
Confidence 43 346788887763 3322211 111 35788999999998877777788 999997 577777765421
Q ss_pred C----CcceEEEEecCCCCEEEEEcCC
Q 018248 222 E----RAEIYSLAFSSNAQWLAASSDK 244 (359)
Q Consensus 222 ~----~~~i~~~~~s~~~~~l~~~~~d 244 (359)
. ...+.+++|+||++.|+.++.+
T Consensus 274 ~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 274 RDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp GGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CccccccCcceEEECCCCCEEEEEeCc
Confidence 1 1158899999998777665554
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=8.4e-14 Score=129.45 Aligned_cols=241 Identities=11% Similarity=0.036 Sum_probs=158.2
Q ss_pred CceEEEEEccCCCEEEEec-C-C----ceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC-------
Q 018248 7 ITIHHLALNQDHGCFATGT-E-T----GFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH------- 73 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~-d-~----~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~------- 73 (359)
..+..++|||||++||.+. + | .|++||+++++.... .+. ...+..++|+++ +.+++++....
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~---~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELK---WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEE---EEESCCCEESTT-SEEEEEECCCC-------
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCC---CceeccEEEECC-CEEEEEEecCcccccccc
Confidence 3688999999999998876 2 3 599999998765432 221 222356789999 88888774220
Q ss_pred ---CCCeEEEEECCCccE--Eeeec---cCcceeEEEEecceeEEE---ec-----CeEEEEEcccce-e-eeeEeccCC
Q 018248 74 ---QSNKVMIWDDHENRY--LGELS---FRSEVKNVRLRRDRIVVV---LN-----QKVYVYNFTDLK-L-VDQIETVVN 135 (359)
Q Consensus 74 ---~d~~i~iwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~~~---~d-----~~i~i~d~~~~~-~-~~~~~~~~~ 135 (359)
....|++|++.+++. ...+. +...+..+.|+|||++++ .+ ..|++||+.++. . ...+..+..
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 034599999877652 22222 223588999999998777 33 389999997762 2 445544444
Q ss_pred CceeeeeecCCCccEEEecC-CCCeeEEEEecCC--eeeEE-eecccccccEEEEccCCcEEEEEeCCCCeEEEEEcC-C
Q 018248 136 PTGLCDVSQNAGPMVMACPG-LLKGQVRVEDYGT--KKSKY-ITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTM-D 210 (359)
Q Consensus 136 ~~~~~~~~~~~~~~~l~~~g-~~d~~v~~~~~~~--~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~-~ 210 (359)
..... ++++++.+++.+.. ..++.|.+++... ...+. +..+...+..++++ ++.++++...++. .+||.+. +
T Consensus 318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~~ 394 (741)
T 1yr2_A 318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK-SQVLAFDLD 394 (741)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE-EEEEEEETT
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeCC
Confidence 33333 45888876655421 1245677777665 23333 44445556677877 5667788888887 7777554 4
Q ss_pred CcEEEEeecCCCCcceEEEEecCCCCEEEEE----cCCCcEEEEEccCCC
Q 018248 211 GSLLQEMRRGAERAEIYSLAFSSNAQWLAAS----SDKGTVHVFGLKVDS 256 (359)
Q Consensus 211 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~----~~dg~i~iw~~~~~~ 256 (359)
++....+... +.+.+..+.++|+++.|+.. ...++|++||+.+++
T Consensus 395 g~~~~~l~~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 395 GKPAGAVSLP-GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp SCEEEECBCS-SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCceeeccCC-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 6666666532 35678999999998866532 234789999998765
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.64 E-value=8.1e-13 Score=110.47 Aligned_cols=234 Identities=10% Similarity=0.050 Sum_probs=157.9
Q ss_pred CceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 7 ITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
.....+++. +++++++.. ++.|.+||.++++...... .......+++++++ .+ +++.. .++.|.+||..+
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~----~~~~p~~i~~~~~g-~l-yv~~~--~~~~v~~iD~~t 114 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT----GFTSPRYIHFLSDE-KA-YVTQI--WDYRIFIINPKT 114 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE----CCSSEEEEEEEETT-EE-EEEEB--SCSEEEEEETTT
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC----CCCCCcEEEEeCCC-eE-EEEEC--CCCeEEEEECCC
Confidence 345677774 344555555 8899999999877654332 23556677776665 33 34432 369999999999
Q ss_pred ccEEeeeccCc------ceeEEEEecceeEEE--e--cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecC
Q 018248 86 NRYLGELSFRS------EVKNVRLRRDRIVVV--L--NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 86 ~~~~~~~~~~~------~v~~~~~~~~~~~~~--~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 155 (359)
++....+.... ....+++ .++.+++ . ++.|.++|+.+++.+..+..... ...++++++++ +++++.+
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~-p~~i~~~~dG~-l~v~~~~ 191 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ-PTSLVMDKYNK-MWTITDG 191 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC-BCCCEECTTSE-EEEEBCC
T ss_pred CeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC-ccceEEcCCCC-EEEEECC
Confidence 98887777444 6677888 4444444 2 78999999999998888876443 34677888775 3444322
Q ss_pred CC--------CeeEEEEecC-CeeeEEeecc-cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcc
Q 018248 156 LL--------KGQVRVEDYG-TKKSKYITAH-ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAE 225 (359)
Q Consensus 156 ~~--------d~~v~~~~~~-~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~ 225 (359)
.. .+.|.+++.. .+....+... ......++++|+++.|+++.. . |.+||..+++.............
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~-v~~~d~~t~~~~~~~~~~~~~~~ 268 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D-IWRMPVEADRVPVRPFLEFRDTK 268 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S-EEEEETTCSSCCSSCSBCCCSSC
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E-EEEEECCCCceeeeeeecCCCCc
Confidence 10 2678887765 4444455432 236889999999999888765 7 99999988875321111101357
Q ss_pred eEEEEecC-CCCEEEEE----cCCCcEEEEEccCCC
Q 018248 226 IYSLAFSS-NAQWLAAS----SDKGTVHVFGLKVDS 256 (359)
Q Consensus 226 i~~~~~s~-~~~~l~~~----~~dg~i~iw~~~~~~ 256 (359)
...++++| +++++++. ..++.|.+||.+ ++
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 88999999 56666666 578899999998 54
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=2.3e-13 Score=126.51 Aligned_cols=278 Identities=8% Similarity=-0.014 Sum_probs=170.6
Q ss_pred ccCCCEEEEec-CCc---eEEEEcC-----CCcceeeee---cccCCCCceeEEEEeccCCEEEEEecCCC-CCCeEEEE
Q 018248 15 NQDHGCFATGT-ETG---FRVYLSD-----PYKPIMRRD---FDRNPRGGTQLVSMLFRSNIICLVNSGPH-QSNKVMIW 81 (359)
Q Consensus 15 s~~g~~l~~~~-d~~---i~iw~~~-----~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-~d~~i~iw 81 (359)
+|+|++++... ++. -.+|..+ .++...... +..+|...+...+|+|+++.+++...... ....|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 38999987766 433 5666554 222221111 22233346778899999999988764210 11579999
Q ss_pred ECCCccEEeeeccCcceeEEEEecceeEEE---ec--------------CeEEEEEccccee--eeeEeccC--CCceee
Q 018248 82 DDHENRYLGELSFRSEVKNVRLRRDRIVVV---LN--------------QKVYVYNFTDLKL--VDQIETVV--NPTGLC 140 (359)
Q Consensus 82 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~d--------------~~i~i~d~~~~~~--~~~~~~~~--~~~~~~ 140 (359)
|+.+++.+........+..++|+|| +.++ .+ ..|++|++.+++. ...+.... ..+..+
T Consensus 195 dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 195 GVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp ETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred ECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 9999987654323333468899999 7666 22 2499999866542 22222222 235678
Q ss_pred eeecCCCccEEEecCC--CCeeEEEEecCCe--e-eEEeecccccccEEEEccCCcEEEEEeC----CCCeEEEEEcCCC
Q 018248 141 DVSQNAGPMVMACPGL--LKGQVRVEDYGTK--K-SKYITAHASRIASIAMTLDGRFVATASS----KGTLIRVFNTMDG 211 (359)
Q Consensus 141 ~~~~~~~~~~l~~~g~--~d~~v~~~~~~~~--~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~~i~iwd~~~~ 211 (359)
.++|+++.+++.+... ....|++++..+. . ...+..+...+.... +|+|+.|+..+. ++. |.+||+.++
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~-l~~~d~~~~ 351 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKK-IVRVDLSGS 351 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCE-EEEEECSSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCE-EEEEeCCCC
Confidence 8999988755544211 2447888776543 4 566666665555553 489988877765 445 899998875
Q ss_pred -cEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeec
Q 018248 212 -SLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVL 290 (359)
Q Consensus 212 -~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (359)
.....+..+ +...+..++++ ++.++++...|+..+||.++.....
T Consensus 352 ~~~~~~l~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~-------------------------------- 397 (741)
T 1yr2_A 352 TPRFDTVVPE-SKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKP-------------------------------- 397 (741)
T ss_dssp SCEEEEEECC-CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCE--------------------------------
T ss_pred ccccEEEecC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCc--------------------------------
Confidence 233333332 44457778887 6678888888998888876632100
Q ss_pred ceEEecccceeEEeec-CCcEEEeeecccCCEEEEEe----cCCeEEEEEeCC
Q 018248 291 PKYFSSKWSMAQFRLP-ENVQYLVGFGRQNNTIVIVG----LDGSYYKCEFDP 338 (359)
Q Consensus 291 ~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~----~dg~i~v~~~~~ 338 (359)
...+.++ .+.+..++++|+++.|+... ..+.|++|++..
T Consensus 398 ---------~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 398 ---------AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp ---------EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred ---------eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 0001222 35677889999987666332 357888887754
No 197
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.61 E-value=3.5e-12 Score=109.68 Aligned_cols=235 Identities=10% Similarity=0.102 Sum_probs=159.4
Q ss_pred CceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 7 ITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
.....|+|+++|+++++.. ++.|++|+.+++........ ..... +++.++++.++++.... ...|.+++...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~----~~~~~-ia~~~~g~~l~~~d~~~--~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG----FKGGK-PAVTKDKQRVYSIGWEG--THTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET----CCBCB-CEECTTSSEEEEEBSST--TCEEEEEEGGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc----CCCCc-eeEecCCCcEEEEecCC--CceEEEEEcCC
Confidence 4678999999999777777 78999999987554432221 22223 78888888777766321 23899999776
Q ss_pred ccEEeee----c-cCcceeEEEEec-ceeEEE--ecCeEEEEEcccceeeee----EeccCCCc--eeeeeecCCCccEE
Q 018248 86 NRYLGEL----S-FRSEVKNVRLRR-DRIVVV--LNQKVYVYNFTDLKLVDQ----IETVVNPT--GLCDVSQNAGPMVM 151 (359)
Q Consensus 86 ~~~~~~~----~-~~~~v~~~~~~~-~~~~~~--~d~~i~i~d~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~l 151 (359)
+.....+ . ....+.+++++| ++.+++ .++.|+.||..++..... ........ ..++++|++..+++
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 6544444 3 446678999999 666665 667899999876653222 11111111 27889987666555
Q ss_pred EecCCCCeeEEEEecCCeeeEEeeccc---------------ccccEEEEccCCcEEEEEe-CCCCeEEEEEcCCCcEEE
Q 018248 152 ACPGLLKGQVRVEDYGTKKSKYITAHA---------------SRIASIAMTLDGRFVATAS-SKGTLIRVFNTMDGSLLQ 215 (359)
Q Consensus 152 ~~~g~~d~~v~~~~~~~~~~~~~~~~~---------------~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~~~~~~ 215 (359)
+ ...++.|+.++.++. ...+.++. .....++++|+|+++++-. .++. |+.|++.+++..
T Consensus 284 ~--d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-I~~~~~~~G~v~- 358 (409)
T 3hrp_A 284 S--DQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-LRKLDILDGYVS- 358 (409)
T ss_dssp E--ETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-EEEEETTTTEEE-
T ss_pred E--eCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-EEEEECCCCEEE-
Confidence 4 335678888887765 33333322 3478899999999777766 6777 999998777644
Q ss_pred EeecCC-------------CCcceEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 018248 216 EMRRGA-------------ERAEIYSLAFSSNAQWLAASSDKGTVHVFGLK 253 (359)
Q Consensus 216 ~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 253 (359)
.+.+.. .-.....++++++|.++++-..++.|+.++++
T Consensus 359 ~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 359 TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 333210 01358899999999888888888889888763
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.61 E-value=1.5e-11 Score=104.25 Aligned_cols=269 Identities=9% Similarity=-0.032 Sum_probs=171.7
Q ss_pred EEccCCCEEEEec--C-C---ceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecC-------CCCCCeEE
Q 018248 13 ALNQDHGCFATGT--E-T---GFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSG-------PHQSNKVM 79 (359)
Q Consensus 13 ~~s~~g~~l~~~~--d-~---~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~-------~~~d~~i~ 79 (359)
...|+++++.+.. . + .|.+||..+++.. ..+. .+....+.++++++.++++... . .++.|.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~--~~i~---~g~~p~i~~spDg~~lyv~n~~~~~~~rg~-~~~~v~ 100 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSIL--GHVN---GGFLPNPVAAHSGSEFALASTSFSRIAKGK-RTDYVE 100 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEE--EEec---CCCCCCeEECCCCCEEEEEeccccccccCC-CCCeEE
Confidence 3457887765544 1 1 7899999887654 3443 2222378899999988877521 1 257899
Q ss_pred EEECCCccEEeeeccC--------cceeEEEEecceeEEE----e-cCeEEEEEcccceeeee-EeccCCCceeeeeecC
Q 018248 80 IWDDHENRYLGELSFR--------SEVKNVRLRRDRIVVV----L-NQKVYVYNFTDLKLVDQ-IETVVNPTGLCDVSQN 145 (359)
Q Consensus 80 iwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~----~-d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~ 145 (359)
+||..+.+.+..+... .....+.++|+|++++ . ++.|.++| .+++.+.. +.... ++.+.+.
T Consensus 101 viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~ 175 (373)
T 2mad_H 101 VFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPG 175 (373)
T ss_pred EEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeC
Confidence 9999998888877532 3456899999998877 2 47899999 99988877 65322 2455677
Q ss_pred CCccEEEecCCCCeeEEEEecCCeeeEEee-----ccccc-ccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc--EEEEe
Q 018248 146 AGPMVMACPGLLKGQVRVEDYGTKKSKYIT-----AHASR-IASIAMTLDGRFVATASSKGTLIRVFNTMDGS--LLQEM 217 (359)
Q Consensus 146 ~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~-----~~~~~-i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~--~~~~~ 217 (359)
++..+++.. .||.+.+++.+++...... ....+ .....+.+++..++..+..+. +.+.|+.+.. .+..+
T Consensus 176 ~~~~~~~~~--~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-v~vid~~~~~~~v~~~~ 252 (373)
T 2mad_H 176 APSTFYLLC--AQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGK-ILQADISAAGATNKAPI 252 (373)
T ss_pred CCceEEEEc--CCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCce-EEEEeccCCcceEeeee
Confidence 766555442 4777776555544442221 11112 123456676665555556778 9999987553 22222
Q ss_pred ec--------CCCCcceEEEEecCCCCEEEEEcC----------CCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCc
Q 018248 218 RR--------GAERAEIYSLAFSSNAQWLAASSD----------KGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSA 279 (359)
Q Consensus 218 ~~--------~~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (359)
.. ...+.....+.++||++.|..+.. ++.|.++|+.+.+..
T Consensus 253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv--------------------- 311 (373)
T 2mad_H 253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTS--------------------- 311 (373)
T ss_pred eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEE---------------------
Confidence 21 001223445788999888777543 356888898876521
Q ss_pred eeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCC-EEEEEe-cCCeEEEEEeCC
Q 018248 280 ISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNN-TIVIVG-LDGSYYKCEFDP 338 (359)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~i~v~~~~~ 338 (359)
.++.+. +....++|+|||+ .++++. .++.|.+++...
T Consensus 312 ---------------------~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 312 ---------------------SQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred ---------------------EEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 001111 2357899999999 788777 489999998765
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=1.7e-12 Score=107.81 Aligned_cols=237 Identities=8% Similarity=0.048 Sum_probs=155.0
Q ss_pred ceEEEEEccCCCEEEE-------ec-CCceEEEEcCCCcceeeeec-ccCCCCceeEEEEeccCCEEEEEecCCCCCCeE
Q 018248 8 TIHHLALNQDHGCFAT-------GT-ETGFRVYLSDPYKPIMRRDF-DRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKV 78 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~-------~~-d~~i~iw~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i 78 (359)
...+++|+++|+++++ +. ++.|.+|+..+++......- ..++...+..+.+.++...+.++. ..+.|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~----~~~~l 94 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD----MRLGL 94 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE----TTTEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE----CCCCE
Confidence 4578999999988888 55 88999999876554321110 001335566677766623444444 23589
Q ss_pred EEEECCCccEEee-ec-----cCcceeEEEEecceeEEE-e--c---------------CeEEEEEcccceeeeeEeccC
Q 018248 79 MIWDDHENRYLGE-LS-----FRSEVKNVRLRRDRIVVV-L--N---------------QKVYVYNFTDLKLVDQIETVV 134 (359)
Q Consensus 79 ~iwd~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~~~-~--d---------------~~i~i~d~~~~~~~~~~~~~~ 134 (359)
.+||.. ++.... .. ....+.++++++++.+++ . + +.|..++.. ++...... ..
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~~ 171 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-AF 171 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-EE
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-CC
Confidence 999987 765443 22 123588999999998777 2 2 467777764 44433222 22
Q ss_pred CCceeeeee----cCCCccEEEecCCCCeeEEEEecC--Ce-----eeEEeeccc-ccccEEEEccCCcEEEEEeCCCCe
Q 018248 135 NPTGLCDVS----QNAGPMVMACPGLLKGQVRVEDYG--TK-----KSKYITAHA-SRIASIAMTLDGRFVATASSKGTL 202 (359)
Q Consensus 135 ~~~~~~~~~----~~~~~~~l~~~g~~d~~v~~~~~~--~~-----~~~~~~~~~-~~i~~~~~s~~~~~l~~~~~dg~~ 202 (359)
.....++++ ++++.++++ ...++.|.+|+.+ +. ....+..+. ..+..++++++|+++++...++.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~--~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~- 248 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVA--ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH- 248 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEE--ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE-
T ss_pred CCcceEEEecccCCCCCEEEEE--ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE-
Confidence 334567888 777654444 3346778886643 32 122233333 56788999999998888777888
Q ss_pred EEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEE-EEEcCCCcEEEEEccCCC
Q 018248 203 IRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWL-AASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~ 256 (359)
|.+||..+++.+..+.. +...+.+++|+|+++.| ++...++.|..|++....
T Consensus 249 i~~~d~~~g~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp EEEECTTCBSCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred EEEEcCCCCcEeEEEeC--CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 99999887776666654 34678999999999955 455566889999987643
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.60 E-value=1.1e-11 Score=102.24 Aligned_cols=225 Identities=14% Similarity=0.122 Sum_probs=150.1
Q ss_pred eEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEec
Q 018248 54 QLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIET 132 (359)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~ 132 (359)
....|.++.+.++++.. .++.|..||..+++. ..+.....+.++++++++.+++ .++.|.+||..+++.......
T Consensus 16 Egp~w~~~~~~l~~~d~---~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDI---PAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEEEEETTTTEEEEEET---TTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEEC
T ss_pred cCCeEECCCCEEEEEEC---CCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEEEec
Confidence 45567776677776654 458999999887765 4455677899999999998777 888999999987765433322
Q ss_pred c----CCCceeeeeecCCCccEEEecCC---------CCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEE-eC
Q 018248 133 V----VNPTGLCDVSQNAGPMVMACPGL---------LKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATA-SS 198 (359)
Q Consensus 133 ~----~~~~~~~~~~~~~~~~~l~~~g~---------~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~ 198 (359)
. ......+++.+++. +++...+. ..+.|+..+.++... .+..+....+.++|+|+++.|+.+ +.
T Consensus 92 ~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp CTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred CCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCC
Confidence 1 12245577788775 34433211 123454454444333 333344556899999999876554 55
Q ss_pred CCCeEEEEEc--CCCcEE--EEee-cCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCcc
Q 018248 199 KGTLIRVFNT--MDGSLL--QEMR-RGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLS 273 (359)
Q Consensus 199 dg~~i~iwd~--~~~~~~--~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 273 (359)
++. |.+|++ .++... ..+. .......+..++++++|++.++....+.|.+||.++++..
T Consensus 170 ~~~-i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~--------------- 233 (297)
T 3g4e_A 170 SYS-VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRL--------------- 233 (297)
T ss_dssp GTE-EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEE---------------
T ss_pred CCc-EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEE---------------
Confidence 677 999997 455432 1121 1112356789999999998888777888999999876511
Q ss_pred CCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeec-ccCCEEEEEec
Q 018248 274 SKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFG-RQNNTIVIVGL 327 (359)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~ 327 (359)
..+..|...+++++|. ||++.|++++.
T Consensus 234 ---------------------------~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 234 ---------------------------QTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp ---------------------------EEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred ---------------------------EEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 1134555678999998 89988887776
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=5.9e-12 Score=106.76 Aligned_cols=233 Identities=10% Similarity=0.045 Sum_probs=154.6
Q ss_pred EEEEccCCCEEEEec-----------CCceEEEEcCCCcceeeeecc-cC---CCCceeEEEEeccCCEEEEEecCCCCC
Q 018248 11 HLALNQDHGCFATGT-----------ETGFRVYLSDPYKPIMRRDFD-RN---PRGGTQLVSMLFRSNIICLVNSGPHQS 75 (359)
Q Consensus 11 ~~~~s~~g~~l~~~~-----------d~~i~iw~~~~~~~~~~~~~~-~~---h~~~v~~~~~~~~~~~~~~~~~~~~~d 75 (359)
.+++||||++++++. ++.|.+||..+.+......+. .. +......+.++++++.++++... .+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~--~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA--AG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC--CC
Confidence 899999999998874 467999999876655433331 00 01223467899999988877632 24
Q ss_pred CeEEEEECCCccEEee-eccCcceeEEEEeccee--EEE--ecCeEEEEEcccceeeeeEe-----ccCCCc-eeeeeec
Q 018248 76 NKVMIWDDHENRYLGE-LSFRSEVKNVRLRRDRI--VVV--LNQKVYVYNFTDLKLVDQIE-----TVVNPT-GLCDVSQ 144 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~--~~~--~d~~i~i~d~~~~~~~~~~~-----~~~~~~-~~~~~~~ 144 (359)
+.|.++| .+++.+.. +..... +.+.|++. ++. .||.+.++|. +++...... ....++ ....+.+
T Consensus 148 ~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 148 PAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred CeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 7899999 99999888 764443 34445542 233 8899999999 777664332 111111 1234455
Q ss_pred CCCccEEEecCCCCeeEEEEecCCee---eEEeec----------ccccccEEEEccCCcEEEEEeC----------CCC
Q 018248 145 NAGPMVMACPGLLKGQVRVEDYGTKK---SKYITA----------HASRIASIAMTLDGRFVATASS----------KGT 201 (359)
Q Consensus 145 ~~~~~~l~~~g~~d~~v~~~~~~~~~---~~~~~~----------~~~~i~~~~~s~~~~~l~~~~~----------dg~ 201 (359)
++...++.+ ..+.+.+.+..... +..+.. .......++++|+++.++++.. .+.
T Consensus 223 ~~~~~~~~~---~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~ 299 (373)
T 2mad_H 223 KSGRIVWPV---YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKE 299 (373)
T ss_pred cCCEEEEEc---CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCe
Confidence 555544433 35677775543321 122211 1122344789999998877653 346
Q ss_pred eEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCC-EEEEEc-CCCcEEEEEccCCCC
Q 018248 202 LIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ-WLAASS-DKGTVHVFGLKVDSG 257 (359)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~i~iw~~~~~~~ 257 (359)
|.++|+.+++.+..+..+ ....+++|+|||+ .++++. .++.|.++|+.+.+.
T Consensus 300 -V~VID~~t~~vv~~i~~g---~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 300 -VTSVTGLVGQTSSQISLG---HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred -EEEEECCCCEEEEEEECC---CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 999999999999998753 3689999999999 777776 589999999998873
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=7.2e-11 Score=97.17 Aligned_cols=231 Identities=8% Similarity=0.005 Sum_probs=153.1
Q ss_pred CCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 6 PITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
...+.+++++++|+++++.. ++.|.+|+.+ ++.. ...+. .+...+..+.+.++++..+ +.. .++.|..+|..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~-~~~~~~~~i~~~~~g~l~v-~~~---~~~~v~~~d~~ 91 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVP-TPDAKVMCLIVSSLGDIWF-TEN---GANKIGKLSKK 91 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECS-STTCCEEEEEECTTSCEEE-EET---TTTEEEEECTT
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECC-CCCCcceeEEECCCCCEEE-Eec---CCCeEEEECCC
Confidence 45789999999999888876 8899999987 4332 22232 2235566677766555333 332 35889999977
Q ss_pred CccEEeeec---cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeee-EeccCCCceeeeeecCCCccEEEecCCC
Q 018248 85 ENRYLGELS---FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQ-IETVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 85 ~~~~~~~~~---~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
++.. .+. ....+.++++.+++.+.+ .++.|..+|.. ++.... +.........+++.+++. ++++. ..
T Consensus 92 -g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~--~~ 165 (300)
T 2qc5_A 92 -GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTE--NQ 165 (300)
T ss_dssp -SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEE--TT
T ss_pred -CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEe--cC
Confidence 5543 232 336788999999887766 36789999986 544322 222233455677777665 44433 23
Q ss_pred CeeEEEEecCCeeeEE-eecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCC
Q 018248 158 KGQVRVEDYGTKKSKY-ITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ 236 (359)
Q Consensus 158 d~~v~~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 236 (359)
++.|..++.++..... ...+...+..++++++|++.++....+. |.+||. +++...... ......+.+++++++|+
T Consensus 166 ~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 166 NNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-IGRITT-TGEISEYDI-PTPNARPHAITAGKNSE 242 (300)
T ss_dssp TTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTC
T ss_pred CCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-EEEEcC-CCcEEEEEC-CCCCCCceEEEECCCCC
Confidence 5677777765544332 1233456789999999987777666777 999997 555443221 11345789999999999
Q ss_pred EEEEEcCCCcEEEEEc
Q 018248 237 WLAASSDKGTVHVFGL 252 (359)
Q Consensus 237 ~l~~~~~dg~i~iw~~ 252 (359)
+.++...++.|..|+.
T Consensus 243 l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 243 IWFTEWGANQIGRITN 258 (300)
T ss_dssp EEEEETTTTEEEEECT
T ss_pred EEEeccCCCeEEEECC
Confidence 7777767788999987
No 203
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=2.3e-12 Score=104.59 Aligned_cols=235 Identities=10% Similarity=-0.002 Sum_probs=150.6
Q ss_pred ceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE--ecCeEEEEEcccceeee
Q 018248 52 GTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVD 128 (359)
Q Consensus 52 ~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~ 128 (359)
....+++.++++ +.+++.. .++.|.+|+..++....... ....+.++++++++.+++ .++.|.+||...... .
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~-~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEG--MYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ-T 100 (270)
T ss_dssp CEEEEEECTTCC-EEEEECS--SSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC-E
T ss_pred CccceEECCCCC-EEEEccC--CCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceE-e
Confidence 455666766665 3331322 46899999976554332212 335688999999988666 468999999865433 2
Q ss_pred eEe-ccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEE-eecccccccEEEEccCCcEEEEEeCCCCeEEEE
Q 018248 129 QIE-TVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKY-ITAHASRIASIAMTLDGRFVATASSKGTLIRVF 206 (359)
Q Consensus 129 ~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iw 206 (359)
.+. ........+++.+++. ++++. ..++.|.+++........ .......+..++++|+|+++++...++. |.+|
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~-l~v~~--~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-i~~~ 176 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGA-VYVAD--RGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNR-VVKL 176 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCC-EEEEE--GGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTE-EEEE
T ss_pred eeecCCcCCCcceEECCCCC-EEEEE--CCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCE-EEEE
Confidence 222 2223456678887764 34432 246678777544332222 2223346789999999997777767778 9999
Q ss_pred EcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEe
Q 018248 207 NTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFI 286 (359)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (359)
|............ +...+.+++++++|.++++...++.|.+|+.......
T Consensus 177 ~~~~~~~~~~~~~--~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~---------------------------- 226 (270)
T 1rwi_B 177 EAESNNQVVLPFT--DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST---------------------------- 226 (270)
T ss_dssp CTTTCCEEECCCS--SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE----------------------------
T ss_pred ecCCCceEeeccc--CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce----------------------------
Confidence 9876665433222 2257899999999988888777889999998654311
Q ss_pred eeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeCC
Q 018248 287 RGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~~ 338 (359)
.... .....+..++++++|+.+++...++.|++|+++.
T Consensus 227 ------~~~~--------~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 227 ------VLPF--------TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp ------ECCC--------CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred ------eecc--------CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 0000 0113467899999998778778899999998765
No 204
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.56 E-value=8.2e-13 Score=121.73 Aligned_cols=241 Identities=8% Similarity=0.058 Sum_probs=158.0
Q ss_pred CCCceEEEEEccCCCEEEEec--C----CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCC------
Q 018248 5 DPITIHHLALNQDHGCFATGT--E----TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGP------ 72 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~--d----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~------ 72 (359)
+...+..++|||||++||.+. . ..|++||+++++.... .+. ......++|+ +++.+++++...
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~---~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLK---DVKFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEE---EEESCCCEEE-TTTEEEEEESSCCC----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccC---CceeccEEEe-CCCEEEEEEecCcccccc
Confidence 456788999999999998644 2 4599999998765432 221 1113567899 999988887431
Q ss_pred ---CCCCeEEEEECCCccE--Eeeecc----CcceeEEEEecceeEEE-------ecCeEEEEEcccce-eeeeEeccCC
Q 018248 73 ---HQSNKVMIWDDHENRY--LGELSF----RSEVKNVRLRRDRIVVV-------LNQKVYVYNFTDLK-LVDQIETVVN 135 (359)
Q Consensus 73 ---~~d~~i~iwd~~~~~~--~~~~~~----~~~v~~~~~~~~~~~~~-------~d~~i~i~d~~~~~-~~~~~~~~~~ 135 (359)
.....|++|++.+++. ...+.. ......+.++|++++++ ..+.|+++|+.++. ....+..+..
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC
Confidence 0235699999887642 223332 23467899999999876 22589999997653 3445554444
Q ss_pred CceeeeeecCCCccEEEecC-CCCeeEEEEecCCee---eEEeecccccccEEEEccCCcEEEEEeCCC---CeEEEEEc
Q 018248 136 PTGLCDVSQNAGPMVMACPG-LLKGQVRVEDYGTKK---SKYITAHASRIASIAMTLDGRFVATASSKG---TLIRVFNT 208 (359)
Q Consensus 136 ~~~~~~~~~~~~~~~l~~~g-~~d~~v~~~~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~~i~iwd~ 208 (359)
.... .++++++.+++.+.. ...+.|..++..... .+.+..|...+. .|+++++.|+....++ . |++||+
T Consensus 282 ~~~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~-l~~~d~ 357 (693)
T 3iuj_A 282 ADVS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATAR-VEQFDY 357 (693)
T ss_dssp SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEE-EEEECT
T ss_pred ceEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeE-EEEEEC
Confidence 3333 367777776555421 113567777766533 255666666654 8999999887766544 5 889988
Q ss_pred CCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC----CcEEEEEccCCC
Q 018248 209 MDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK----GTVHVFGLKVDS 256 (359)
Q Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~~ 256 (359)
..+ ....+... ..+.+..+.++++++.|+....+ ++++.||+.+++
T Consensus 358 ~g~-~~~~l~~p-~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 358 EGK-RVREVALP-GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TSC-EEEEECCS-SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCC-eeEEeecC-CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 644 44555432 34567888888888876655444 789999987765
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=1.6e-11 Score=101.89 Aligned_cols=235 Identities=11% Similarity=0.121 Sum_probs=149.9
Q ss_pred ceeEEEEeccCCEEEEE-----ecCCCCCCeEEEEECCCccEEeeec-----cCcceeEEEEecc-eeEEE--ecCeEEE
Q 018248 52 GTQLVSMLFRSNIICLV-----NSGPHQSNKVMIWDDHENRYLGELS-----FRSEVKNVRLRRD-RIVVV--LNQKVYV 118 (359)
Q Consensus 52 ~v~~~~~~~~~~~~~~~-----~~~~~~d~~i~iwd~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~~~--~d~~i~i 118 (359)
....+++.+++...+.. .+. .++.|.+||..+++...... +...+.+++++++ +.+++ ..+.|.+
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGK--PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTE--ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCC--CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 34566777655443330 011 46899999988877543322 3366889999999 87555 4558999
Q ss_pred EEcccceeeee-Eecc----CCCceeeeeecCCCccEEEecCCCC---------------eeEEEEecCCeeeEEeeccc
Q 018248 119 YNFTDLKLVDQ-IETV----VNPTGLCDVSQNAGPMVMACPGLLK---------------GQVRVEDYGTKKSKYITAHA 178 (359)
Q Consensus 119 ~d~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~l~~~g~~d---------------~~v~~~~~~~~~~~~~~~~~ 178 (359)
||.. ++.... .... ...+..+++.+++. ++++. . .+ +.|..++.+++ ...+..+.
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~ 171 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITA-P-AGEVAPADYTRSMQEKFGSIYCFTTDGQ-MIQVDTAF 171 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEE-C-BCBCTTSCCCBTTSSSCEEEEEECTTSC-EEEEEEEE
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEe-c-CcccccccccccccCCCCeEEEECCCCC-EEEeccCC
Confidence 9987 654332 2211 12355677777764 34333 2 22 55666665543 33333344
Q ss_pred ccccEEEEc----cCCcEEEEE-eCCCCeEEEEEcC-CCcE-----EEEeecCCCC-cceEEEEecCCCCEEEEEcCCCc
Q 018248 179 SRIASIAMT----LDGRFVATA-SSKGTLIRVFNTM-DGSL-----LQEMRRGAER-AEIYSLAFSSNAQWLAASSDKGT 246 (359)
Q Consensus 179 ~~i~~~~~s----~~~~~l~~~-~~dg~~i~iwd~~-~~~~-----~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~~dg~ 246 (359)
.....++++ |+++.|+.+ ..++. |.+||.. +++. ...+.. +. ..+..++++++|+++++...++.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~-i~~~~~~~~g~~~~~~~~~~~~~--~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKK-LWSYDIKGPAKIENKKVWGHIPG--THEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTE-EEEEEEEETTEEEEEEEEEECCC--CSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCe-EEEEECCCCCccccceEEEECCC--CCCCCCCceEECCCCCEEEEEcCCCE
Confidence 556889999 999766555 45677 9999986 4542 222222 22 46789999999998888777888
Q ss_pred EEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEe
Q 018248 247 VHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVG 326 (359)
Q Consensus 247 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 326 (359)
|.+||.++++.. ..+..+...+..++|+|+++.|++++
T Consensus 249 i~~~d~~~g~~~------------------------------------------~~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 249 IEVFGPDGGQPK------------------------------------------MRIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp EEEECTTCBSCS------------------------------------------EEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEcCCCCcEe------------------------------------------EEEeCCCCCceeEEECCCCCEEEEEe
Confidence 999998755411 01223345678899999999666655
Q ss_pred -cCCeEEEEEeCC
Q 018248 327 -LDGSYYKCEFDP 338 (359)
Q Consensus 327 -~dg~i~v~~~~~ 338 (359)
.++.|.+|+++.
T Consensus 287 ~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 287 HENNAVWKFEWQR 299 (314)
T ss_dssp TTTTEEEEEECSS
T ss_pred CCCCeEEEEeCCC
Confidence 468888887764
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=1.4e-11 Score=101.54 Aligned_cols=219 Identities=10% Similarity=0.029 Sum_probs=145.4
Q ss_pred ceEEEEEccCCCEE-EEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 8 TIHHLALNQDHGCF-ATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 8 ~v~~~~~s~~g~~l-~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
--.+..|+|++..| .+.. ++.|..|+.++++.. ... ....+..+++.++++. +++. ++.|.+||..+
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~----~~~~~~~i~~~~dG~l-~v~~-----~~~l~~~d~~~ 82 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT----MDAPVSSVALRQSGGY-VATI-----GTKFCALNWKE 82 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE----CSSCEEEEEEBTTSSE-EEEE-----TTEEEEEETTT
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe----CCCceEEEEECCCCCE-EEEE-----CCeEEEEECCC
Confidence 44578899965554 5555 889999999875442 222 2567888888888873 3333 37899999888
Q ss_pred ccEEeeecc-----CcceeEEEEecceeEEE-e-----------cCeEEEEEcc-cceeeeeEeccCCCceeeeeecCCC
Q 018248 86 NRYLGELSF-----RSEVKNVRLRRDRIVVV-L-----------NQKVYVYNFT-DLKLVDQIETVVNPTGLCDVSQNAG 147 (359)
Q Consensus 86 ~~~~~~~~~-----~~~v~~~~~~~~~~~~~-~-----------d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (359)
++....... ...+.+++++|+|.+++ . ...-.+|.+. .++... +.........++|+|+++
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSC
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCC
Confidence 765433221 24578899999998777 1 1234455543 233322 222223346789999988
Q ss_pred ccEEEecCCCCeeEEEEecC---Cee-----eEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 148 PMVMACPGLLKGQVRVEDYG---TKK-----SKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 148 ~~~l~~~g~~d~~v~~~~~~---~~~-----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
.++++- +.++.|.+++.+ +.. ...+..+......++++++|++.++....+. |..||..+++.+..+..
T Consensus 162 ~lyv~~--~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~-v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 162 IFYYID--SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR-VIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp EEEEEE--GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE-EEEECTTTCCEEEEEEC
T ss_pred EEEEec--CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE-EEEEcCCCceEEEEEEC
Confidence 755543 346778886642 221 1222334456789999999987777777788 99999988999888875
Q ss_pred CCCCcceEEEEec-CCCCEEEEEcC
Q 018248 220 GAERAEIYSLAFS-SNAQWLAASSD 243 (359)
Q Consensus 220 ~~~~~~i~~~~~s-~~~~~l~~~~~ 243 (359)
+...+++++|. |+++.|..++.
T Consensus 239 --p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 239 --PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp --SSSBEEEEEEESGGGCEEEEEEB
T ss_pred --CCCCceEEEEeCCCCCEEEEEcC
Confidence 34579999998 88887655543
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.54 E-value=9.9e-11 Score=97.71 Aligned_cols=223 Identities=10% Similarity=0.043 Sum_probs=144.7
Q ss_pred eEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEec
Q 018248 54 QLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIET 132 (359)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~ 132 (359)
....|.++.+.++++.. .++.|..||..+++. ..+.....+.++.+++++.+++ .+..|.+||..+++.......
T Consensus 52 egp~~~~~~~~l~~~d~---~~~~i~~~d~~~~~~-~~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNI---LERELHELHLASGRK-TVHALPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEEEETTTTEEEEEEG---GGTEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEECS
T ss_pred cCCeEeCCCCEEEEEEC---CCCEEEEEECCCCcE-EEEECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcEEEEeeC
Confidence 34567777666666654 358999999887654 3445567899999999998877 666799999877765332221
Q ss_pred c----CCCceeeeeecCCCccEEEecCC----CCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEe-CCCCeE
Q 018248 133 V----VNPTGLCDVSQNAGPMVMACPGL----LKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATAS-SKGTLI 203 (359)
Q Consensus 133 ~----~~~~~~~~~~~~~~~~~l~~~g~----~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~~i 203 (359)
. ...+..+++++++. +++...+. ..+.|..++ +++ ...+..+......++|+|+++.|+.+. .++. |
T Consensus 128 ~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~-~g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~-I 203 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA-KGK-VTKLFADISIPNSICFSPDGTTGYFVDTKVNR-L 203 (326)
T ss_dssp STTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE-TTE-EEEEEEEESSEEEEEECTTSCEEEEEETTTCE-E
T ss_pred CCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe-CCc-EEEeeCCCcccCCeEEcCCCCEEEEEECCCCE-E
Confidence 1 12345677888775 33332111 124555555 443 333333444567899999998776554 4677 9
Q ss_pred EEEEcC--CC-c-----EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCC
Q 018248 204 RVFNTM--DG-S-----LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSK 275 (359)
Q Consensus 204 ~iwd~~--~~-~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (359)
.+||+. ++ + ....+.. ....+..++++++|++.++...++.|.+|+.. ++.
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~--~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~------------------ 262 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTG--IKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNH------------------ 262 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTT--SSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCE------------------
T ss_pred EEEEcccccCCcccCceEEEECCC--CCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCE------------------
Confidence 999985 55 3 1222221 23467889999999988777667789999873 330
Q ss_pred CCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeec-ccCCEEEEEecCC
Q 018248 276 NSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFG-RQNNTIVIVGLDG 329 (359)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg 329 (359)
...+..+...+.+++|+ ++++.|++++..+
T Consensus 263 ------------------------~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 263 ------------------------IARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ------------------------EEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred ------------------------EEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 01133455568899998 8988887776543
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=6.5e-12 Score=105.29 Aligned_cols=270 Identities=13% Similarity=0.082 Sum_probs=169.2
Q ss_pred EEEccCCCEEEEec------CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEec-------CCCCCCeE
Q 018248 12 LALNQDHGCFATGT------ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNS-------GPHQSNKV 78 (359)
Q Consensus 12 ~~~s~~g~~l~~~~------d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~-------~~~~d~~i 78 (359)
....|+++.+.+.. ++.|.++|..+++....... |. .+ . +.++++++.++++.. +. .++.|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v--G~-~P-~-va~spDG~~lyVan~~~~r~~~G~-~~~~V 111 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG--GF-LP-N-PVVADDGSFIAHASTVFSRIARGE-RTDYV 111 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE--CS-SC-E-EEECTTSSCEEEEEEEEEETTEEE-EEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC--CC-CC-c-EEECCCCCEEEEEcccccccccCC-CCCEE
Confidence 45579999887775 35799999998776644443 22 22 3 899999998877652 00 24789
Q ss_pred EEEECCCccEEeeeccC--------cceeEEEEecceeEEE---e--cCeEEEEEcccceeeeeEeccCCCceeeeeecC
Q 018248 79 MIWDDHENRYLGELSFR--------SEVKNVRLRRDRIVVV---L--NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQN 145 (359)
Q Consensus 79 ~iwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~---~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (359)
.+||..+++.+.++... .....+.++|||++++ . ++.|.++|+.+++.+.++.... +..+.|.
T Consensus 112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~~~~~P~ 187 (386)
T 3sjl_D 112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----CYHIFPT 187 (386)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEE
T ss_pred EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----cceeecC
Confidence 99999999999888632 2567899999998766 2 5799999999999998886532 1222343
Q ss_pred CCccEEEecCCCCeeEEEEecC--CeeeEEeecc----cccc-cEEEEc-cCCcEEEEEeCCCCeEEEEEcCCCc--EEE
Q 018248 146 AGPMVMACPGLLKGQVRVEDYG--TKKSKYITAH----ASRI-ASIAMT-LDGRFVATASSKGTLIRVFNTMDGS--LLQ 215 (359)
Q Consensus 146 ~~~~~l~~~g~~d~~v~~~~~~--~~~~~~~~~~----~~~i-~~~~~s-~~~~~l~~~~~dg~~i~iwd~~~~~--~~~ 215 (359)
+...+++.+ .||.+.+.+.. ++.......+ ..++ ....|. ++|++++ .+.+|. |++.|+.+.. .+.
T Consensus 188 g~~~~~~~~--~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~-V~v~d~~~~~~~v~~ 263 (386)
T 3sjl_D 188 APDTFFMHC--RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGK-IHQIDLSSGDAKFLP 263 (386)
T ss_dssp ETTEEEEEE--TTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSE-EEEEECTTSSCEECC
T ss_pred CCceeEEEC--CCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCE-EEEEECCCCcceeec
Confidence 333333321 35555443332 2221111111 1222 124554 6886555 556788 9999987654 222
Q ss_pred Eee--------cCCCCcceEEEEecCCCCEEEEEcC----------CCcEEEEEccCCCCCCCCCccccCCCCCccCCCC
Q 018248 216 EMR--------RGAERAEIYSLAFSSNAQWLAASSD----------KGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNS 277 (359)
Q Consensus 216 ~~~--------~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (359)
.+. .+..+.....++++++++.|+.... .+.|.+.|+++.+..
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~------------------- 324 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL------------------- 324 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE-------------------
T ss_pred ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE-------------------
Confidence 221 1111233445778999988877643 246888888887621
Q ss_pred CceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCC-EEEEEec-CCeEEEEEeCC
Q 018248 278 SAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNN-TIVIVGL-DGSYYKCEFDP 338 (359)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~-dg~i~v~~~~~ 338 (359)
+. +.+. ..+..++|++|++ .|+++.. +|.|.+++...
T Consensus 325 --------------~~---------i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 325 --------------AK---------FEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp --------------EE---------EEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred --------------EE---------EECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 01 1111 2456899999996 7777654 89999997764
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.52 E-value=7.5e-12 Score=106.81 Aligned_cols=267 Identities=8% Similarity=-0.028 Sum_probs=173.7
Q ss_pred cCCCEEEEec--C----CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecC-------CCCCCeEEEEE
Q 018248 16 QDHGCFATGT--E----TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSG-------PHQSNKVMIWD 82 (359)
Q Consensus 16 ~~g~~l~~~~--d----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~-------~~~d~~i~iwd 82 (359)
++++.+.+.. + +.|.++|..+.+....... | ..+ .+.++++++.++++... . .++.|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v--G-~~P--gia~SpDgk~lyVan~~~~~~~~G~-~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG--G-FLP--HPVAAEDGSFFAQASTVFERIARGK-RTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE--C-SSC--EEEECTTSSCEEEEEEEEEETTEEE-EEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC--C-CCC--ceEECCCCCEEEEEeccccccccCC-CCCEEEEEE
Confidence 5777665554 3 6899999998877655554 2 223 78899999988776521 0 247899999
Q ss_pred CCCccEEeeeccC--------cceeEEEEecceeEEE----e-cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCcc
Q 018248 83 DHENRYLGELSFR--------SEVKNVRLRRDRIVVV----L-NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPM 149 (359)
Q Consensus 83 ~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~~----~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (359)
..+++.+..+... .....+.++||+++++ . ++.|.+.|+.+++.+..+.... +..+.|++...
T Consensus 156 ~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~ 231 (426)
T 3c75_H 156 PVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTV 231 (426)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTE
T ss_pred CCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcE
Confidence 9999998887632 3467899999998776 2 5789999999999988887532 13445555554
Q ss_pred EEEecCCCCeeEEE-EecCCeeeEE----eeccccc-ccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEE--Eeec--
Q 018248 150 VMACPGLLKGQVRV-EDYGTKKSKY----ITAHASR-IASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQ--EMRR-- 219 (359)
Q Consensus 150 ~l~~~g~~d~~v~~-~~~~~~~~~~----~~~~~~~-i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~--~~~~-- 219 (359)
+++.+ .||.+.+ ....++.... +.....+ ...+.+.+++..++..+..+. |.+.|........ .+..
T Consensus 232 ~v~~~--~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~-V~ViD~~~~~~~v~~~~~~~~ 308 (426)
T 3c75_H 232 FYMNC--RDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGK-IFQADLTAEGATFRAPIEALT 308 (426)
T ss_dssp EEEEE--TTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSE-EEEEEECSSCEEECCCEESSC
T ss_pred EEEEc--CCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCc-EEEEeccCCceEEeeeeeecc
Confidence 45443 3555444 3323332211 1111112 124567899888877788888 9999986654221 1110
Q ss_pred ------CCCCcceEEEEecCCCCEEEEEcC----------CCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeee
Q 018248 220 ------GAERAEIYSLAFSSNAQWLAASSD----------KGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSF 283 (359)
Q Consensus 220 ------~~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (359)
+........++++|+++.+++... ++.|.+.|+.+.+..
T Consensus 309 ~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv------------------------- 363 (426)
T 3c75_H 309 EAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI------------------------- 363 (426)
T ss_dssp TTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE-------------------------
T ss_pred ccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEE-------------------------
Confidence 000112223789999887776542 347999999887621
Q ss_pred eEeeeecceEEecccceeEEeecCCcEEEeeecccCC-EEEEEec-CCeEEEEEeCC
Q 018248 284 RFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNN-TIVIVGL-DGSYYKCEFDP 338 (359)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~-dg~i~v~~~~~ 338 (359)
+ ++.++ .....++|+||++ .++++.. ++.|.|++...
T Consensus 364 ---~--------------~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 364 ---N--------------KIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp ---E--------------EEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred ---E--------------EEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 0 01111 1346899999999 8888884 99999998765
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.51 E-value=1.7e-11 Score=102.77 Aligned_cols=233 Identities=12% Similarity=0.086 Sum_probs=152.8
Q ss_pred EEEEccCCCEEEEec-----------CCceEEEEcCCCcceeeeecccCC----CCceeEEEEeccCCEEEEEecCCCCC
Q 018248 11 HLALNQDHGCFATGT-----------ETGFRVYLSDPYKPIMRRDFDRNP----RGGTQLVSMLFRSNIICLVNSGPHQS 75 (359)
Q Consensus 11 ~~~~s~~g~~l~~~~-----------d~~i~iw~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~~~~~~~~~d 75 (359)
.++++|||++++++. ++.|.+||..+.+......+..+. ......+.++++++.+++.... .+
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~--~~ 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS--PA 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS--SS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC--CC
Confidence 399999999886654 467999999987766544442000 1245568899999988776532 25
Q ss_pred CeEEEEECCCccEEeeeccCcceeEEEEecce--eEEE--ecCeEEEEEccc-ceeeeeEecc----CCCce-eeeee-c
Q 018248 76 NKVMIWDDHENRYLGELSFRSEVKNVRLRRDR--IVVV--LNQKVYVYNFTD-LKLVDQIETV----VNPTG-LCDVS-Q 144 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~--~d~~i~i~d~~~-~~~~~~~~~~----~~~~~-~~~~~-~ 144 (359)
+.|.++|+.+++.+.++...+. ....|.+ .+++ .||++.+.++.+ ++........ ..++. ...|. +
T Consensus 160 ~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp CEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred CeEEEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence 8999999999999999874432 2223433 2222 788888888865 4442211111 11111 12343 3
Q ss_pred CCCccEEEecCCCCeeEEEEecCCeeeEEeec-------------ccccccEEEEccCCcEEEEEeC----------CCC
Q 018248 145 NAGPMVMACPGLLKGQVRVEDYGTKKSKYITA-------------HASRIASIAMTLDGRFVATASS----------KGT 201 (359)
Q Consensus 145 ~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~~----------dg~ 201 (359)
++. .++++ .+|.+++.+..+........ .......++++|+++.++.... ...
T Consensus 237 dG~-~~~vs---~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~ 312 (386)
T 3sjl_D 237 AGR-LVWPT---YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRF 312 (386)
T ss_dssp TTE-EEEEB---TTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEE
T ss_pred CCc-EEEEe---CCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCE
Confidence 442 23333 36889987765543222111 1234556888999998877643 245
Q ss_pred eEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCC-EEEEE-cCCCcEEEEEccCCC
Q 018248 202 LIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ-WLAAS-SDKGTVHVFGLKVDS 256 (359)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~-~~dg~i~iw~~~~~~ 256 (359)
|.++|+.+++.+..+..+ ..+.++++++|++ +|++. ..++.|.++|..+++
T Consensus 313 -V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 313 -VVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp -EEEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred -EEEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 999999999999999863 4788999999997 66654 558999999999877
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.48 E-value=1.5e-10 Score=99.50 Aligned_cols=244 Identities=10% Similarity=0.035 Sum_probs=147.0
Q ss_pred ceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE---ecC--eEEEEEccccee
Q 018248 52 GTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV---LNQ--KVYVYNFTDLKL 126 (359)
Q Consensus 52 ~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~d~--~i~i~d~~~~~~ 126 (359)
....+++.++++ ++++.. .++.|++||..+++............ ++|++++..++ .++ .|.+++...+..
T Consensus 132 ~P~~la~d~~g~-lyv~d~---~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLAYQR---DDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CEEEEEECSTTE-EEEEET---TTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CceEEEEeCCCC-EEEEec---CCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 345666665555 333332 35899999988777665554333344 99999987655 323 899999865544
Q ss_pred eeeE----eccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEe----e-cccccc--cEEEEccC-CcEEE
Q 018248 127 VDQI----ETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYI----T-AHASRI--ASIAMTLD-GRFVA 194 (359)
Q Consensus 127 ~~~~----~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~----~-~~~~~i--~~~~~s~~-~~~l~ 194 (359)
...+ .........++++|+...+++ + . .++.|+.++........+ . ++...- ..++|+|+ +.+++
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~-d-~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYF-V-D-SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEE-E-C-TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEE-E-E-CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 3333 113344567888886555444 2 2 477888888766544443 1 122222 39999995 55555
Q ss_pred EEeCCCCeEEEEEcCCCcEEEEeecCC-------------CCcceEEEEecCCCCEEEEEc-CCCcEEEEEccCCCCCCC
Q 018248 195 TASSKGTLIRVFNTMDGSLLQEMRRGA-------------ERAEIYSLAFSSNAQWLAASS-DKGTVHVFGLKVDSGSPG 260 (359)
Q Consensus 195 ~~~~dg~~i~iwd~~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~ 260 (359)
+-..++. |+.|+.. ++ +..+.+.. .-.....++++|+|+++++-. .++.|+.|++.++...
T Consensus 284 ~d~~~~~-I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-- 358 (409)
T 3hrp_A 284 SDQNLSS-VYKITPD-GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-- 358 (409)
T ss_dssp EETTTTE-EEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE--
T ss_pred EeCCCCE-EEEEecC-CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE--
Confidence 5556677 9999864 33 22332210 013578999999999888877 8889999997665411
Q ss_pred CCccccCCCCCccCCCCCceeeeeEeeee--cceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEe
Q 018248 261 TSKLHSASEPNLSSKNSSAISSFRFIRGV--LPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEF 336 (359)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~ 336 (359)
.+.+. ...+.+.....+ .-.....+++++++..+++-..++.|+.+.+
T Consensus 359 ------------------------~~~g~~~~~g~~~g~~~~~----~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 359 ------------------------TVAGQVDVASQIDGTPLEA----TFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ------------------------EEEECTTCBSCCCBSTTTC----CBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred ------------------------EEeCCCCCCCcCCCChhce----EeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 00000 000000000000 0134578999999777777777888888765
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=1.8e-11 Score=104.48 Aligned_cols=234 Identities=14% Similarity=0.136 Sum_probs=156.5
Q ss_pred EEEEccCCCEEEEec-----------CCceEEEEcCCCcceeeeecc-cC---CCCceeEEEEeccCCEEEEEecCCCCC
Q 018248 11 HLALNQDHGCFATGT-----------ETGFRVYLSDPYKPIMRRDFD-RN---PRGGTQLVSMLFRSNIICLVNSGPHQS 75 (359)
Q Consensus 11 ~~~~s~~g~~l~~~~-----------d~~i~iw~~~~~~~~~~~~~~-~~---h~~~v~~~~~~~~~~~~~~~~~~~~~d 75 (359)
.++++|||++++++. ++.|.++|..+.+......+. .. .......+.++++++.+++.... .+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~--~~ 199 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS--PA 199 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS--SS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC--CC
Confidence 799999999887764 467999999987765444431 00 01234567889999988877632 24
Q ss_pred CeEEEEECCCccEEeeeccCcceeEEEEecce--eEEE--ecCeEEEEEcccceeeee----EeccCCCc-eeeeeecCC
Q 018248 76 NKVMIWDDHENRYLGELSFRSEVKNVRLRRDR--IVVV--LNQKVYVYNFTDLKLVDQ----IETVVNPT-GLCDVSQNA 146 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~--~d~~i~i~d~~~~~~~~~----~~~~~~~~-~~~~~~~~~ 146 (359)
+.|.+.|+.+++.+.++..... ....|++ .++. .||.+.+.+..+++.... +.....++ ....+.+++
T Consensus 200 ~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 200 PAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp CEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred CeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 8999999999999988874432 2334443 2222 677888788755554422 22222221 124567887
Q ss_pred CccEEEecCCCCeeEEEEecCCeeeEEeec-------------ccccccEEEEccCCcEEEEEeC----------CCCeE
Q 018248 147 GPMVMACPGLLKGQVRVEDYGTKKSKYITA-------------HASRIASIAMTLDGRFVATASS----------KGTLI 203 (359)
Q Consensus 147 ~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~~----------dg~~i 203 (359)
...++.. ..+.+.+.+........... .......++++|+++.+++... .+. |
T Consensus 277 ~~~~~~s---~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~-V 352 (426)
T 3c75_H 277 GRLVWPT---YTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRF-V 352 (426)
T ss_dssp CEEEEEB---TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEE-E
T ss_pred CEEEEEe---CCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCE-E
Confidence 7655543 35778885554332222110 1122334789999987776642 346 9
Q ss_pred EEEEcCCCcEEEEeecCCCCcceEEEEecCCCC-EEEEEc-CCCcEEEEEccCCC
Q 018248 204 RVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ-WLAASS-DKGTVHVFGLKVDS 256 (359)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~i~iw~~~~~~ 256 (359)
.++|+.+.+.+.++..+ .....++|+|||+ +++++. .++.|.|+|+.+.+
T Consensus 353 sVID~~T~kvv~~I~vg---~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 353 VVLNAETGERINKIELG---HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEEETTTCCEEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EEEECCCCeEEEEEECC---CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 99999999999999753 3588999999999 888877 58999999999987
No 213
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.48 E-value=4.7e-10 Score=92.22 Aligned_cols=234 Identities=12% Similarity=0.048 Sum_probs=149.9
Q ss_pred CCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 6 PITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
...+.+++++++|.++++.. ++.|..|+.+ ++ .....+. .+...+..+.+.+++...+... .++.|..||.
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~----~~~~i~~~d~- 127 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKK-GI-IKEYTLP-NPDSAPYGITEGPNGDIWFTEM----NGNRIGRITD- 127 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECS-STTCCEEEEEECTTSCEEEEET----TTTEEEEECT-
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEEeCC-CcCCCceeeEECCCCCEEEEec----CCceEEEECC-
Confidence 46789999999999888877 7889999876 22 2222221 2344566677766554333322 3589999997
Q ss_pred CccEEeee-c-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeee-EeccCCCceeeeeecCCCccEEEecCCCC
Q 018248 85 ENRYLGEL-S-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQ-IETVVNPTGLCDVSQNAGPMVMACPGLLK 158 (359)
Q Consensus 85 ~~~~~~~~-~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 158 (359)
+++..... . ....+..+++.+++.+.+ .++.|..||. +++.... +.........+++.+++. ++++. ..+
T Consensus 128 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~--~~~ 203 (299)
T 2z2n_A 128 DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVE--IIG 203 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEE--TTT
T ss_pred CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEc--cCC
Confidence 55544322 2 345688999999987766 3579999998 6654432 222233345667777654 34433 235
Q ss_pred eeEEEEecCCeeeEE-eecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCE
Q 018248 159 GQVRVEDYGTKKSKY-ITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQW 237 (359)
Q Consensus 159 ~~v~~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 237 (359)
+.|.+++.++..... ...+...+.+++++++|++.++...++. |..||. +++ +..+....+...+.++++ ++|++
T Consensus 204 ~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l 279 (299)
T 2z2n_A 204 NKIGRITTSGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANK-IGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETI 279 (299)
T ss_dssp TEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCE
T ss_pred ceEEEECCCCcEEEEECCCCCCCceeEEECCCCCEEEeccCCce-EEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCE
Confidence 678877775443221 2234467889999999997666656777 999998 554 334432223457899999 89988
Q ss_pred EEEEcCCCcEEEEEccCCC
Q 018248 238 LAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 238 l~~~~~dg~i~iw~~~~~~ 256 (359)
+++.. .+.+..++.++.+
T Consensus 280 ~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 280 WFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EEEET-TTEEEEEEEC---
T ss_pred EEEec-CCcEEEEEcCccc
Confidence 77665 5668888877643
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.44 E-value=4.7e-10 Score=93.59 Aligned_cols=215 Identities=9% Similarity=0.047 Sum_probs=140.5
Q ss_pred eEEEEEccCCCE-EEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCc
Q 018248 9 IHHLALNQDHGC-FATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHEN 86 (359)
Q Consensus 9 v~~~~~s~~g~~-l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 86 (359)
..+.+|+|++.. +.+.. ++.|..|+.++++... ... ...+..+.+.++++.++ +. +..|.+||..++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~----~~~v~~i~~~~dg~l~v-~~-----~~gl~~~d~~~g 119 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HAL----PFMGSALAKISDSKQLI-AS-----DDGLFLRDTATG 119 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EEC----SSCEEEEEEEETTEEEE-EE-----TTEEEEEETTTC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EEC----CCcceEEEEeCCCeEEE-EE-----CCCEEEEECCCC
Confidence 467899998554 45555 7889999988654321 222 45677788877766444 33 245999998888
Q ss_pred cEEeeecc-----CcceeEEEEecceeEEE-e-c-------CeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEE
Q 018248 87 RYLGELSF-----RSEVKNVRLRRDRIVVV-L-N-------QKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 87 ~~~~~~~~-----~~~v~~~~~~~~~~~~~-~-d-------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (359)
+....... ...+.++.++|+|.+++ . + +.|..++ +++... +.........++|+++++.++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 120 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEE
T ss_pred cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEE
Confidence 75433221 23588999999998776 2 1 4566666 454332 22222334578899998765554
Q ss_pred ecCCCCeeEEEEecC---C-e-----eeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCC
Q 018248 153 CPGLLKGQVRVEDYG---T-K-----KSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAER 223 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~---~-~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~ 223 (359)
. ..++.|.+++.+ + . ....+......+..++++++|.+.++...++. |.+||. +++.+..+.. ..
T Consensus 197 ~--~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~-v~~~d~-~g~~~~~i~~--~~ 270 (326)
T 2ghs_A 197 D--TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA-VDRYDT-DGNHIARYEV--PG 270 (326)
T ss_dssp E--TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-EEEECT-TCCEEEEEEC--SC
T ss_pred E--CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-EEEECC-CCCEEEEEEC--CC
Confidence 3 346788887753 3 2 11122223455678999999987777666677 999997 6777777765 34
Q ss_pred cceEEEEec-CCCCEEEEEcC
Q 018248 224 AEIYSLAFS-SNAQWLAASSD 243 (359)
Q Consensus 224 ~~i~~~~~s-~~~~~l~~~~~ 243 (359)
..+++++|+ ++++.|+.++.
T Consensus 271 ~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 271 KQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp SBEEEEEEESTTSCEEEEEEB
T ss_pred CCcEEEEEecCCCCEEEEEec
Confidence 579999998 88877655443
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=6.7e-11 Score=99.51 Aligned_cols=226 Identities=10% Similarity=0.084 Sum_probs=137.1
Q ss_pred CceEEEEEccCCCEEEEec---CCceEEEEcCCCcceeeeecc------cCCCCceeEEEEeccCCEEEEEecCC--CCC
Q 018248 7 ITIHHLALNQDHGCFATGT---ETGFRVYLSDPYKPIMRRDFD------RNPRGGTQLVSMLFRSNIICLVNSGP--HQS 75 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~---d~~i~iw~~~~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~~~~~~~~--~~d 75 (359)
..+..++++|+|+++++.. ++.++||.+++++. ..+. .+|...+..+++.++++ +.++..+. ..+
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~---~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL---IPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE---EESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe---ecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCC
Confidence 4678999999999998863 34366776653322 2221 12345667777776654 33333210 014
Q ss_pred CeEEEEECCCccEEeeeccC-------cceeEEEEecc-eeEEE--e----cCeEEEEEcccceeeeeEeccCCCce-ee
Q 018248 76 NKVMIWDDHENRYLGELSFR-------SEVKNVRLRRD-RIVVV--L----NQKVYVYNFTDLKLVDQIETVVNPTG-LC 140 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~~~~-------~~v~~~~~~~~-~~~~~--~----d~~i~i~d~~~~~~~~~~~~~~~~~~-~~ 140 (359)
..|.+||+.+++.+..+... ..+..++++++ +..++ . ++.|.+||+.+++....+..+..... ..
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 78999999999877766522 34689999975 44434 2 56899999988876655543221110 12
Q ss_pred eeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcC---CCc-----
Q 018248 141 DVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTM---DGS----- 212 (359)
Q Consensus 141 ~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~---~~~----- 212 (359)
.+.+++.. +.+ ...++.+..|. ..+..++|+|+|+.|+.+...+..+..++.. .+.
T Consensus 173 ~~~~~g~~--~~~-~~~~g~~~~~~-------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~ 236 (343)
T 2qe8_A 173 DLVIDGVP--VQI-GQPDGTVIRPH-------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAE 236 (343)
T ss_dssp CCEETTEE--CBE-ECTTSCEECCC-------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHH
T ss_pred ceeECCEE--EEe-ccCCCceecee-------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhh
Confidence 33344332 221 22344443321 2457899999999998888777425555532 111
Q ss_pred ---EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 018248 213 ---LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 213 ---~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 255 (359)
.+..+ + +.+....++++++|+++++...++.|.+||.+++
T Consensus 237 ~~~~~~~~-g--~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 237 LGSKIERY-S--EKPICDGISIDKDHNIYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp HHTTCEEE-E--ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT
T ss_pred hhcceEec-c--cCCCCceEEECCCCCEEEEccCCCeEEEEECCCC
Confidence 01111 1 2234567999999999999989999999998443
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.42 E-value=9.9e-11 Score=107.90 Aligned_cols=240 Identities=10% Similarity=0.081 Sum_probs=149.7
Q ss_pred CCCCceeEEEEeccCCEEEEEec--CCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE---ec---------
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNS--GPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV---LN--------- 113 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~--~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~d--------- 113 (359)
+|...+..++++|+++.++++.. +. ....|++||+.+++.+...........++|+ |++.++ .+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~-~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGS-DWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSC-CEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCC-ceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 45556778899999998887653 22 3478999999999876542222224678899 987666 33
Q ss_pred ----CeEEEEEccccee--eeeEec---cCCCceeeeeecCCCccEEEec-CCCCeeEEEEecCCe--eeEEeecccccc
Q 018248 114 ----QKVYVYNFTDLKL--VDQIET---VVNPTGLCDVSQNAGPMVMACP-GLLKGQVRVEDYGTK--KSKYITAHASRI 181 (359)
Q Consensus 114 ----~~i~i~d~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~l~~~-g~~d~~v~~~~~~~~--~~~~~~~~~~~i 181 (359)
..|++|++.+.+. ...+.. +......+.++|+++.+++... +...+.+++++.... ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 2499999866542 222222 2233456788999887555432 223458888776543 556666666665
Q ss_pred cEEEEccCCcEEE-EEeCC---CCeEEEEEcCCCcE--EEEeecCCCCcceEEEEecCCCCEEEEEcC-CC--cEEEEEc
Q 018248 182 ASIAMTLDGRFVA-TASSK---GTLIRVFNTMDGSL--LQEMRRGAERAEIYSLAFSSNAQWLAASSD-KG--TVHVFGL 252 (359)
Q Consensus 182 ~~~~~s~~~~~l~-~~~~d---g~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg--~i~iw~~ 252 (359)
... ++++|..|+ ....+ +. |..+|+.++.. ...+.. +...+. .|+++++.|+.... ++ .|++|++
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~-l~~~d~~~~~~~~~~~l~~--~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRR-LVTVDAANPGPAHWRDLIP--ERQQVL--TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCE-EEEEETTSCCGGGCEEEEC--CCSSCE--EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred EEE-EeccCCEEEEEECCCCCCCE-EEEEeCCCCCccccEEEec--CCCCEE--EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 555 666666554 44433 46 89999987654 234443 223344 88999988876654 43 5888887
Q ss_pred cCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecC-CcEEEeeecccCCEEEEEecC---
Q 018248 253 KVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPE-NVQYLVGFGRQNNTIVIVGLD--- 328 (359)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d--- 328 (359)
+.+... .+.++. +.+..++++++++.|+....+
T Consensus 358 ~g~~~~-------------------------------------------~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~t 394 (693)
T 3iuj_A 358 EGKRVR-------------------------------------------EVALPGLGSVSGFNGKHDDPALYFGFENYAQ 394 (693)
T ss_dssp TSCEEE-------------------------------------------EECCSSSSEEEECCCCTTCSCEEEEEECSSS
T ss_pred CCCeeE-------------------------------------------EeecCCCceEEeeecCCCCCEEEEEecCCCC
Confidence 743200 011222 456677888888777766554
Q ss_pred -CeEEEEEeCC
Q 018248 329 -GSYYKCEFDP 338 (359)
Q Consensus 329 -g~i~v~~~~~ 338 (359)
+.++.|++..
T Consensus 395 P~~l~~~d~~~ 405 (693)
T 3iuj_A 395 PPTLYRFEPKS 405 (693)
T ss_dssp CCEEEEECTTT
T ss_pred CCEEEEEECCC
Confidence 7777776543
No 217
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=3e-11 Score=101.73 Aligned_cols=171 Identities=15% Similarity=0.129 Sum_probs=122.0
Q ss_pred CceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc-----------EEeeeccCcceeEEEEecceeEEE--ecCeEE
Q 018248 51 GGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR-----------YLGELSFRSEVKNVRLRRDRIVVV--LNQKVY 117 (359)
Q Consensus 51 ~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~--~d~~i~ 117 (359)
..+..+++++....++.++ . ..+.+|+++..+ ......++. |..++| ++.+++ .++.|+
T Consensus 38 ~~~nlLais~~~gll~a~~----~-~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~ 109 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAAS----G-SKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALY 109 (388)
T ss_dssp SCCBCEEEETTTTEEEEEE----T-TEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEE
T ss_pred ccccEEEEcCCCCEEEEeC----C-CEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEE
Confidence 3678889998888877666 2 467779865433 222334666 999999 666666 899999
Q ss_pred EEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEe
Q 018248 118 VYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATAS 197 (359)
Q Consensus 118 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 197 (359)
+||+.+.........+...+..+.+. ... +++ ...||.+.+|+........ +...|++++|||+| ++.|.
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~--~p~--~av-~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~ 179 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNV--NNT--LVI-LNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLL 179 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEEC--SSE--EEE-EETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEE
T ss_pred EEEchhhhccCccceeecceeeEEec--CCC--EEE-EECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEE
Confidence 99997665555555555555544433 333 333 3369999999987544432 45689999999999 67899
Q ss_pred CCCCeEEEEEcCCCcE--EEEeec----C---CCCcceEEEEecCCCCEEEE
Q 018248 198 SKGTLIRVFNTMDGSL--LQEMRR----G---AERAEIYSLAFSSNAQWLAA 240 (359)
Q Consensus 198 ~dg~~i~iwd~~~~~~--~~~~~~----~---~~~~~i~~~~~s~~~~~l~~ 240 (359)
.||. +++|+...++. ..++.. + .|...|.++.|.++++++++
T Consensus 180 ~dg~-i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 180 KDRS-FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TTSC-EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCc-EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999 99999877775 556621 1 14578999999999998876
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.38 E-value=5.6e-10 Score=92.24 Aligned_cols=220 Identities=10% Similarity=0.005 Sum_probs=140.2
Q ss_pred CceEEEEEccCCCE-EEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 7 ITIHHLALNQDHGC-FATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 7 ~~v~~~~~s~~g~~-l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
.......|+|+|+. +.++. ++.|..|+.+ ++.. ... .+...+..+.+.++++.++... .++.|.+|+..
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~-~~~---~~~~~~~gl~~d~dG~l~v~~~----~~~~v~~~~~~ 115 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVD-VLL---DATAFTNGNAVDAQQRLVHCEH----GRRAITRSDAD 115 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEE-EEE---ESCSCEEEEEECTTSCEEEEET----TTTEEEEECTT
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEE-EEe---CCCCccceeeECCCCCEEEEEC----CCCEEEEECCC
Confidence 44578899999994 45555 7889999874 3322 122 2355677788888777443322 34789999975
Q ss_pred CccEEeeec-----cCcceeEEEEecceeEEEec--------------------CeEEEEEcccceeeeeEeccCCCcee
Q 018248 85 ENRYLGELS-----FRSEVKNVRLRRDRIVVVLN--------------------QKVYVYNFTDLKLVDQIETVVNPTGL 139 (359)
Q Consensus 85 ~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~d--------------------~~i~i~d~~~~~~~~~~~~~~~~~~~ 139 (359)
++...... ....+.++++.++|.+.+.| +.|+.+|..+++..... .......
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~g 192 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNG 192 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcc
Confidence 55332222 11346789999999877732 46777777666543332 2233456
Q ss_pred eeeecCCCccEEEecCC---CCeeEEEEecCCeee---EEe-ecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc
Q 018248 140 CDVSQNAGPMVMACPGL---LKGQVRVEDYGTKKS---KYI-TAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGS 212 (359)
Q Consensus 140 ~~~~~~~~~~~l~~~g~---~d~~v~~~~~~~~~~---~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~ 212 (359)
++++|+++.++++.... ..+.|.+++.....+ ..+ .........++++++|++. +++.+ . |.+|+. +++
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-g-v~~~~~-~g~ 268 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-G-VCVFDS-DGQ 268 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-E-EEEECT-TSC
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-c-EEEECC-CCC
Confidence 89999988766554211 025777766543212 111 1123456689999999944 44444 5 999997 677
Q ss_pred EEEEeecCCCCcceEEEEecCCCCEEEEEcCCC
Q 018248 213 LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKG 245 (359)
Q Consensus 213 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 245 (359)
.+..+... ..+.+++|+++++.|..++.++
T Consensus 269 ~~~~~~~~---~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 269 LLGHIPTP---GTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEEEEECS---SCCCEEEECTTSCEEEEEETTE
T ss_pred EEEEEECC---CceeEEEEeCCCCEEEEEcCCe
Confidence 77777642 2588999999998888777664
No 219
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=1.6e-11 Score=103.34 Aligned_cols=170 Identities=9% Similarity=0.102 Sum_probs=124.1
Q ss_pred CCceEEEEEccCCCEEEEecCCceEEEEcCCCc-----------ceeeeecccCCCCceeEEEEeccCCEEEEEecCCCC
Q 018248 6 PITIHHLALNQDHGCFATGTETGFRVYLSDPYK-----------PIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQ 74 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~-----------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 74 (359)
..+++.+++++...++++|+...+.+|+++..+ ...... +.. +..+++ +++.++++.
T Consensus 37 ~~~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~----lp~-V~~l~f--d~~~L~v~~----- 104 (388)
T 1xip_A 37 FASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKE----IPD-VIFVCF--HGDQVLVST----- 104 (388)
T ss_dssp SSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEE----CTT-EEEEEE--ETTEEEEEE-----
T ss_pred cccccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEee----CCC-eeEEEE--CCCEEEEEc-----
Confidence 347999999999999999996677889876332 112222 345 888888 777777662
Q ss_pred CCeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEE
Q 018248 75 SNKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 75 d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (359)
++.|++||+.+........ +...+.++.+.+....++ .||.|.+||+.+++... ....+.+++|+|.+ ..+
T Consensus 105 ~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~v- 177 (388)
T 1xip_A 105 RNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAV- 177 (388)
T ss_dssp SSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEE-
T ss_pred CCcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEE-
Confidence 5899999988765544444 677788888876653333 99999999998776543 23468899999988 333
Q ss_pred ecCCCCeeEEEEecCCee---eEEe------e---cccccccEEEEccCCcEEEEE
Q 018248 153 CPGLLKGQVRVEDYGTKK---SKYI------T---AHASRIASIAMTLDGRFVATA 196 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~~~---~~~~------~---~~~~~i~~~~~s~~~~~l~~~ 196 (359)
|..||.+++|..++.. .+.+ . +|...|.++.|.+++.++++=
T Consensus 178 --g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 178 --LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp --EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred --EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 4468999998777755 3445 2 367889999999999988763
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.38 E-value=1.6e-09 Score=89.48 Aligned_cols=222 Identities=11% Similarity=0.078 Sum_probs=139.3
Q ss_pred CceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cCcceeEEEEecceeEEE---ecCeEEEEEccccee
Q 018248 51 GGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKL 126 (359)
Q Consensus 51 ~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~ 126 (359)
.......|.++++.++++.. .++.|..|+. +++. ..+. ....+..++++++|++++ .++.|.+|+.. ++.
T Consensus 45 ~~~egp~~~~~g~~l~~~d~---~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDL---VGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEET---TTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cCccCCeEeCCCCEEEEEEC---CCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE
Confidence 34456778888887766654 4689999997 5553 3343 566789999999998777 34689999975 543
Q ss_pred eeeEecc----CCCceeeeeecCCCccEEEec---CC-------------CCeeEEEEecCCeeeEEeecccccccEEEE
Q 018248 127 VDQIETV----VNPTGLCDVSQNAGPMVMACP---GL-------------LKGQVRVEDYGTKKSKYITAHASRIASIAM 186 (359)
Q Consensus 127 ~~~~~~~----~~~~~~~~~~~~~~~~~l~~~---g~-------------~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~ 186 (359)
....... ...+..+++.+++. +.++. |. ..+.|+.++.....+..+. .....+.++|
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~--l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~ 195 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGA--IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAF 195 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSC--EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEE
T ss_pred EEEEeccCCCccCCCCCEEECCCCC--EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEE
Confidence 2221111 12345677887765 23321 11 1245666665433333333 4456688999
Q ss_pred ccCCcEEEEEeCC------CCeEEEEEcCCCcEE--EEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCC
Q 018248 187 TLDGRFVATASSK------GTLIRVFNTMDGSLL--QEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGS 258 (359)
Q Consensus 187 s~~~~~l~~~~~d------g~~i~iwd~~~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 258 (359)
+||++.|+.+... +. |.+|++..+... ..+... ..+.+..++++++|++.++ +.+| |.+|+.+...
T Consensus 196 spdg~~lyv~~~~~~~~~~~~-i~~~~~~~~~l~~~~~~~~~-~~~~pdgi~~d~~G~lwv~-~~~g-v~~~~~~g~~-- 269 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVE-ITAFAWRDGALHDRRHFASV-PDGLPDGFCVDRGGWLWSS-SGTG-VCVFDSDGQL-- 269 (305)
T ss_dssp CTTSSEEEEEECCC---CCCE-EEEEEEETTEEEEEEEEECC-SSSCCCSEEECTTSCEEEC-CSSE-EEEECTTSCE--
T ss_pred cCCCCEEEEEecCCcCCCCCE-EEEEEecCCCccCCeEEEEC-CCCCCCeEEECCCCCEEEe-cCCc-EEEECCCCCE--
Confidence 9999988777665 57 999998765411 112111 2344567899999995544 4444 8899874321
Q ss_pred CCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCC
Q 018248 259 PGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDG 329 (359)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 329 (359)
+..+..+. .+..++|+|+++.|++++.++
T Consensus 270 -----------------------------------------~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 270 -----------------------------------------LGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp -----------------------------------------EEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred -----------------------------------------EEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 01122333 367789999999999888865
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.36 E-value=1.9e-08 Score=85.16 Aligned_cols=190 Identities=11% Similarity=0.070 Sum_probs=121.0
Q ss_pred ccCCEEEEEecCCCCCCeEEEEECCCc----cEEeeec--------cCcceeEEEEecceeEEE--ec------CeEEEE
Q 018248 60 FRSNIICLVNSGPHQSNKVMIWDDHEN----RYLGELS--------FRSEVKNVRLRRDRIVVV--LN------QKVYVY 119 (359)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~i~iwd~~~~----~~~~~~~--------~~~~v~~~~~~~~~~~~~--~d------~~i~i~ 119 (359)
.+.+.+++.+. .++.|.++|+.+. +....++ .......+...|+|.++. .+ +.|.++
T Consensus 93 ~~r~~l~v~~l---~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGL---RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBT---TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccC---CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEE
Confidence 34455554443 4699999998765 5555552 112456778889994444 44 789999
Q ss_pred EcccceeeeeEeccCCC---ceeeeeecCCCccEEEecC------------------CCCeeEEEEecCC-eeeEEeecc
Q 018248 120 NFTDLKLVDQIETVVNP---TGLCDVSQNAGPMVMACPG------------------LLKGQVRVEDYGT-KKSKYITAH 177 (359)
Q Consensus 120 d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~g------------------~~d~~v~~~~~~~-~~~~~~~~~ 177 (359)
|.++.+.+.+++....+ ...+.|+|+++. ++++. .....|.+|+... +.+.++...
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~--mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEV--LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTE--EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCE--EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 99999999888644332 223667888874 44321 2367899988865 444445432
Q ss_pred --cccccEEEE--ccCCcEEEEEeC------CCCeEEEEEcCCCcE--EEEe--ecCC--C------------CcceEEE
Q 018248 178 --ASRIASIAM--TLDGRFVATASS------KGTLIRVFNTMDGSL--LQEM--RRGA--E------------RAEIYSL 229 (359)
Q Consensus 178 --~~~i~~~~~--s~~~~~l~~~~~------dg~~i~iwd~~~~~~--~~~~--~~~~--~------------~~~i~~~ 229 (359)
......+.| +|+++++.+++. ++. |.+|....++. ...+ .... . ...+..+
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~-V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSS-IWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEE-EEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCce-EEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 123445555 999998888775 446 87776655432 1111 1100 0 1357889
Q ss_pred EecCCCCEEEEEcC-CCcEEEEEccCC
Q 018248 230 AFSSNAQWLAASSD-KGTVHVFGLKVD 255 (359)
Q Consensus 230 ~~s~~~~~l~~~~~-dg~i~iw~~~~~ 255 (359)
.+|+||++|.++.. .+.|.+||+...
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSST
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 99999999877664 678999999744
No 222
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.33 E-value=8.3e-09 Score=84.73 Aligned_cols=230 Identities=12% Similarity=0.060 Sum_probs=147.4
Q ss_pred CCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 6 PITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
...+.+++++++|+++++.. ++.|..|+.+ ++.. ...+. .....+..+++.++++..+ +.. .++.|..+|..
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~-~~~~~~~~i~~~~~g~l~v-~~~---~~~~i~~~~~~ 133 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLP-QPDSGPYGITEGLNGDIWF-TQL---NGDRIGKLTAD 133 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECS-STTCCEEEEEECSTTCEEE-EET---TTTEEEEECTT
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCC-CCCCCCccceECCCCCEEE-Ecc---CCCeEEEECCC
Confidence 35788999999999888777 7889999987 4332 22221 2235566677766555333 332 35889999976
Q ss_pred CccEEee-ec-cCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEec--cCCCceeeeeecCCCccEEEecCCC
Q 018248 85 ENRYLGE-LS-FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIET--VVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 85 ~~~~~~~-~~-~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
++.... +. ....+..+++.+++.+.+ .++.|..+|. +++... +.. .......+++.+++ .++++. ..
T Consensus 134 -g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g-~l~v~~--~~ 207 (300)
T 2qc5_A 134 -GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDG-ALWFVE--IM 207 (300)
T ss_dssp -SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTS-SEEEEE--TT
T ss_pred -CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCC-CEEEEc--cC
Confidence 554422 22 345788999999988665 3678999998 554433 322 22334566777665 344443 23
Q ss_pred CeeEEEEecCCeeeEE-eecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCC
Q 018248 158 KGQVRVEDYGTKKSKY-ITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ 236 (359)
Q Consensus 158 d~~v~~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 236 (359)
.+.|.+++.++..... ...+...+.+++++++|++.++...++. |..||. +++.. .+........+.+++++++|+
T Consensus 208 ~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~ 284 (300)
T 2qc5_A 208 GNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ-IGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGS 284 (300)
T ss_dssp TTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEECT-TSCEE-EEECCSTTCCCCCEEECTTSC
T ss_pred CCEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe-EEEECC-CCcEE-EEECCccCCccceeEeCCCCC
Confidence 5567777765543332 2334566889999999997666656677 999997 45443 332221335688999999998
Q ss_pred EEEEEcCCCcEEEEEcc
Q 018248 237 WLAASSDKGTVHVFGLK 253 (359)
Q Consensus 237 ~l~~~~~dg~i~iw~~~ 253 (359)
+.++.. . .|..++.+
T Consensus 285 l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 285 VWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEEECS-S-EEEEEEEC
T ss_pred EEEEcc-C-ceEEeCCC
Confidence 766554 4 67766653
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.32 E-value=3.8e-09 Score=96.66 Aligned_cols=225 Identities=9% Similarity=0.053 Sum_probs=135.6
Q ss_pred CEEEEec-CCceEEEEcCCCcceeeeecccCCCC-------ceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEe
Q 018248 19 GCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRG-------GTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLG 90 (359)
Q Consensus 19 ~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~-------~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~ 90 (359)
..|++++ ++.|..+|.++++.+...... .... .+........+..+++.+ .|+.|..+|..+|+.+.
T Consensus 78 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~v~v~~----~dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQ-IDRSTGFKGCCDVVNRGVALWKGKVYVGA----WDGRLIALDAATGKEVW 152 (677)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCC-CCGGGGGGSSSCSCCCCCEEETTEEEEEC----TTSEEEEEETTTCCEEE
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCC-CCccccccccccCCCCCceEECCEEEEEc----CCCEEEEEECCCCCEEe
Confidence 3455555 899999999999888776653 1000 000111222455666655 57999999999999998
Q ss_pred eeccC------cceeEEEEecceeEEE--e------cCeEEEEEcccceeeeeEeccCCCc-------------------
Q 018248 91 ELSFR------SEVKNVRLRRDRIVVV--L------NQKVYVYNFTDLKLVDQIETVVNPT------------------- 137 (359)
Q Consensus 91 ~~~~~------~~v~~~~~~~~~~~~~--~------d~~i~i~d~~~~~~~~~~~~~~~~~------------------- 137 (359)
.+... ..+.+.-.-.++.+++ . ++.|+.+|..+++.+..+.......
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred eecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 87732 2232211122455555 2 6899999999999988876532210
Q ss_pred -------------eeeeeecCCCccEEEecCCCCe-------------------eEEEEec-CCeeeEEeec--cc----
Q 018248 138 -------------GLCDVSQNAGPMVMACPGLLKG-------------------QVRVEDY-GTKKSKYITA--HA---- 178 (359)
Q Consensus 138 -------------~~~~~~~~~~~~~l~~~g~~d~-------------------~v~~~~~-~~~~~~~~~~--~~---- 178 (359)
..+++.++.+.+++.+ + ++ .|..++. +++.+-.++. |.
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~-~--~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~ 309 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGT-G--NGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDY 309 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEEC-C--CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEEC-C--CCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccc
Confidence 1345666666544433 2 32 3555444 4555444432 21
Q ss_pred ---ccccEEEEccCC---cEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCC---------cce-----------------
Q 018248 179 ---SRIASIAMTLDG---RFVATASSKGTLIRVFNTMDGSLLQEMRRGAER---------AEI----------------- 226 (359)
Q Consensus 179 ---~~i~~~~~s~~~---~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~---------~~i----------------- 226 (359)
.....+....+| ..++.++.+|. ++++|..+|+.+..+...... .++
T Consensus 310 ~~~~~p~l~~~~~dG~~~~~l~~~~~~G~-l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~ 388 (677)
T 1kb0_A 310 TSTQPMILADIKIAGKPRKVILHAPKNGF-FFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPG 388 (677)
T ss_dssp CCCSCCEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSC
T ss_pred ccCCCcEEEecccCCcEeeEEEEECCCCE-EEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcC
Confidence 122223334477 68889999999 999999999998776532100 011
Q ss_pred -------EEEEecCCCCEEEEEcCCCcEEEEEc
Q 018248 227 -------YSLAFSSNAQWLAASSDKGTVHVFGL 252 (359)
Q Consensus 227 -------~~~~~s~~~~~l~~~~~dg~i~iw~~ 252 (359)
..++++|++.++++...+-...++..
T Consensus 389 ~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~ 421 (677)
T 1kb0_A 389 PYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDD 421 (677)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCCEEEEC
T ss_pred cccccCCCCceEcCCCCEEEEeChhcceeeecc
Confidence 14688898888887766544444443
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.32 E-value=6.6e-09 Score=87.92 Aligned_cols=225 Identities=12% Similarity=0.106 Sum_probs=141.3
Q ss_pred c--cCCCEEEEec--CCceEEEEcCC--Ccceeeeecc-------cCCCCceeEEEEeccCCEEEEEecCCC--CCCeEE
Q 018248 15 N--QDHGCFATGT--ETGFRVYLSDP--YKPIMRRDFD-------RNPRGGTQLVSMLFRSNIICLVNSGPH--QSNKVM 79 (359)
Q Consensus 15 s--~~g~~l~~~~--d~~i~iw~~~~--~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~~~~~~~~~--~d~~i~ 79 (359)
+ +++++|++.+ ++.|.++|+.+ .+......++ .+ ......+...+++ ..+...++.. ..+.|.
T Consensus 90 ~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g-~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 90 KPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSG-YSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHC-EEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred CCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccC-CCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 7 8899987766 88999999863 3334434331 00 0122234555666 3322222100 247899
Q ss_pred EEECCCccEEeeeccC-c---ceeEEEEecceeEEE-e---------------------cCeEEEEEcccceeeeeEecc
Q 018248 80 IWDDHENRYLGELSFR-S---EVKNVRLRRDRIVVV-L---------------------NQKVYVYNFTDLKLVDQIETV 133 (359)
Q Consensus 80 iwd~~~~~~~~~~~~~-~---~v~~~~~~~~~~~~~-~---------------------d~~i~i~d~~~~~~~~~~~~~ 133 (359)
++|.++++.+.++... . --..+.|+|+++.++ . +.+|.+||+.+++.+.++...
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 9999999999998722 2 234588899988777 3 589999999988888888764
Q ss_pred CC--Cceee--eeecCCCccEEEec---CCCCeeEEEEecCCee---eEEe--ecc----------------cccccEEE
Q 018248 134 VN--PTGLC--DVSQNAGPMVMACP---GLLKGQVRVEDYGTKK---SKYI--TAH----------------ASRIASIA 185 (359)
Q Consensus 134 ~~--~~~~~--~~~~~~~~~~l~~~---g~~d~~v~~~~~~~~~---~~~~--~~~----------------~~~i~~~~ 185 (359)
.. ...-+ +++|+++..++++. -..+++|.+|..+... .+.+ ... ......+.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 21 11223 34888877666542 0035677663322211 1111 110 24578899
Q ss_pred EccCCcEEEEEeC-CCCeEEEEEcCC---CcEEEEeecCCC------------CcceEEEEecCCCCEEEEEc
Q 018248 186 MTLDGRFVATASS-KGTLIRVFNTMD---GSLLQEMRRGAE------------RAEIYSLAFSSNAQWLAASS 242 (359)
Q Consensus 186 ~s~~~~~l~~~~~-dg~~i~iwd~~~---~~~~~~~~~~~~------------~~~i~~~~~s~~~~~l~~~~ 242 (359)
+||||++|.++.. .+. |.+||+.. .+.+..+..+.. .+....++++|||++|+++.
T Consensus 328 lS~DGrfLYVSnrg~d~-VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGE-VRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTE-EEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCE-EEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999988876 455 99999863 355655554311 01368899999999999887
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.30 E-value=1.8e-08 Score=85.81 Aligned_cols=223 Identities=9% Similarity=0.058 Sum_probs=135.9
Q ss_pred CCEEEEec-CCceEEEEcCCCcceeeeecccCC----C-CceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEee
Q 018248 18 HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNP----R-GGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGE 91 (359)
Q Consensus 18 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h----~-~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~ 91 (359)
+..+.+++ ++.|..+|.++++......+.... . ...........++.+++.+ .++.|..+|..+|+.+..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~----~~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGS----EKAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEE----TTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEc----CCCEEEEEECCCCCEEEE
Confidence 45666666 889999999998887766652000 0 1111122233456666665 579999999999998887
Q ss_pred eccCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeEeccCCCc-----eeeeeecCCCccEEEecCCCCeeEEEE
Q 018248 92 LSFRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETVVNPT-----GLCDVSQNAGPMVMACPGLLKGQVRVE 164 (359)
Q Consensus 92 ~~~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~g~~d~~v~~~ 164 (359)
......+.......++.+++ .++.|..+|..+++.+.......... ....+. +.. +.. +..++.+..+
T Consensus 129 ~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~--v~~-g~~~g~l~~~ 203 (376)
T 3q7m_A 129 TKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGA--AVV-GGDNGRVSAV 203 (376)
T ss_dssp EECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTE--EEE-CCTTTEEEEE
T ss_pred EeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCE--EEE-EcCCCEEEEE
Confidence 76443333222223455555 78899999999999888776533211 112222 232 333 4567777776
Q ss_pred ec-CCeeeEEeecccc--c--cc---EEEEcc--CCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCC
Q 018248 165 DY-GTKKSKYITAHAS--R--IA---SIAMTL--DGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSN 234 (359)
Q Consensus 165 ~~-~~~~~~~~~~~~~--~--i~---~~~~s~--~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~ 234 (359)
+. +++.+-....... . +. .+.-.| .+..++.++.++. +..+|..+++.+..... .....+.. +
T Consensus 204 d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~-l~~~d~~tG~~~w~~~~----~~~~~~~~--~ 276 (376)
T 3q7m_A 204 LMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN-LTALDLRSGQIMWKREL----GSVNDFIV--D 276 (376)
T ss_dssp ETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC-EEEEETTTCCEEEEECC----CCEEEEEE--E
T ss_pred ECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE-EEEEECCCCcEEeeccC----CCCCCceE--E
Confidence 65 4555444332110 0 00 010111 2456777888898 99999999998877653 23444444 3
Q ss_pred CCEEEEEcCCCcEEEEEccCCC
Q 018248 235 AQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 235 ~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
+..|+.++.++.|..+|.++++
T Consensus 277 ~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 277 GNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp TTEEEEEETTCCEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCc
Confidence 5677778889999999999876
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.29 E-value=3e-09 Score=97.33 Aligned_cols=234 Identities=8% Similarity=0.009 Sum_probs=147.7
Q ss_pred CCCEEEEec-CCceEEEEcCCCcceeeeecc-cCCC-CceeEEEEeccCCEEEEEecCCC--CCCeEEEEECCCccEEee
Q 018248 17 DHGCFATGT-ETGFRVYLSDPYKPIMRRDFD-RNPR-GGTQLVSMLFRSNIICLVNSGPH--QSNKVMIWDDHENRYLGE 91 (359)
Q Consensus 17 ~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~-~~h~-~~v~~~~~~~~~~~~~~~~~~~~--~d~~i~iwd~~~~~~~~~ 91 (359)
++..+++++ |+.+..+|..+++.+...... .... ..+...-. ..++.+++.+.+.. .++.|..+|..+|+.+..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~-v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPR-VFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCE-EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcE-EECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 355677777 999999999999888766641 0000 11111101 12344544432210 158999999999999887
Q ss_pred eccCc-c--------------------------------eeEEEEecceeEEE---ec-------------------CeE
Q 018248 92 LSFRS-E--------------------------------VKNVRLRRDRIVVV---LN-------------------QKV 116 (359)
Q Consensus 92 ~~~~~-~--------------------------------v~~~~~~~~~~~~~---~d-------------------~~i 116 (359)
+.... . ...++++|++..++ .+ +.|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 75211 1 12467777765554 22 259
Q ss_pred EEEEcccceeeeeEeccCCC---------ceeeeeecCCCc-cEEEecCCCCeeEEEEec-CCeeeEEeeccc-------
Q 018248 117 YVYNFTDLKLVDQIETVVNP---------TGLCDVSQNAGP-MVMACPGLLKGQVRVEDY-GTKKSKYITAHA------- 178 (359)
Q Consensus 117 ~i~d~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~l~~~g~~d~~v~~~~~-~~~~~~~~~~~~------- 178 (359)
..+|..+++.+..++..... ........+++. .+++. ++.+|.+++.+. +++.+..+....
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~-~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~ 364 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH-APKNGFFFVLDRTNGKFISAKNFVPVNWASGY 364 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE-CCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE-ECCCCEEEEEECCCCCEeccccccccCccccc
Confidence 99999999998887653221 112223334431 22343 668999999655 455544332110
Q ss_pred ----cc------------------------ccEEEEccCCcEEEEEeCC-------------------------------
Q 018248 179 ----SR------------------------IASIAMTLDGRFVATASSK------------------------------- 199 (359)
Q Consensus 179 ----~~------------------------i~~~~~s~~~~~l~~~~~d------------------------------- 199 (359)
.+ -..++++|++.++++...+
T Consensus 365 d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 444 (677)
T 1kb0_A 365 DKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAK 444 (677)
T ss_dssp CTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCE
T ss_pred CCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccc
Confidence 00 0257889988887775431
Q ss_pred ------------CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 200 ------------GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 200 ------------g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
|. |..||+.+++.+-++..+ .++....++.++.+++.++.||.+++||.++++
T Consensus 445 ~~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 445 FFNAEPPKSKPFGR-LLAWDPVAQKAAWSVEHV---SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp EECSSCCCSCCEEE-EEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccccccCCCCCccE-EEEEeCCCCcEEeecCCC---CCCcCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 67 999999999998887642 344555566778888889999999999999987
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.28 E-value=3e-10 Score=95.35 Aligned_cols=226 Identities=9% Similarity=0.049 Sum_probs=144.5
Q ss_pred EEEEccCCCEEEEec-----------CCceEEEEcCCCcceeeeecccCC----CCceeEEEEeccCCEEEEEecCCCCC
Q 018248 11 HLALNQDHGCFATGT-----------ETGFRVYLSDPYKPIMRRDFDRNP----RGGTQLVSMLFRSNIICLVNSGPHQS 75 (359)
Q Consensus 11 ~~~~s~~g~~l~~~~-----------d~~i~iw~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~~~~~~~~~d 75 (359)
.++++|||+++.++. ++.|.+||+.+++......+..+. ......+.++++++.++++..+ ..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~--~~ 146 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG--SS 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS--SS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccC--CC
Confidence 699999999997774 577999999998776554431000 1235678899999988877632 13
Q ss_pred CeEEE--EECCCccEEeeeccCcceeEEEEecce--eEEE--ecCeEEEEEccc-----ceeee----eEeccCCCceee
Q 018248 76 NKVMI--WDDHENRYLGELSFRSEVKNVRLRRDR--IVVV--LNQKVYVYNFTD-----LKLVD----QIETVVNPTGLC 140 (359)
Q Consensus 76 ~~i~i--wd~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~--~d~~i~i~d~~~-----~~~~~----~~~~~~~~~~~~ 140 (359)
..+.+ +|..+ +..+...+. ..+.|++ .+++ .|+.+.+.|+.+ ++... .+.....+.
T Consensus 147 ~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--- 217 (368)
T 1mda_H 147 AAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--- 217 (368)
T ss_dssp CEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---
T ss_pred CeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---
Confidence 67888 99877 445543222 2234554 3333 788888888876 44331 122222222
Q ss_pred eeecCCCccEEEecCCCCeeEEEEecCCee---eEEeec----------ccccccEEEEccCCcEEEEEeC-C-------
Q 018248 141 DVSQNAGPMVMACPGLLKGQVRVEDYGTKK---SKYITA----------HASRIASIAMTLDGRFVATASS-K------- 199 (359)
Q Consensus 141 ~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~---~~~~~~----------~~~~i~~~~~s~~~~~l~~~~~-d------- 199 (359)
. .+++...++++ . +.+.+.+..... +..+.. .......++++|+++.++++.. .
T Consensus 218 ~-~~~~~~~~~vs---~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~ 292 (368)
T 1mda_H 218 Q-ANYPGMLVWAV---A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAA 292 (368)
T ss_dssp E-ETTTTEEEECB---S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSC
T ss_pred c-cccCCEEEEEc---C-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccccc
Confidence 3 56655533332 3 677775543321 111110 1112233789999998876543 2
Q ss_pred -CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCC-EEEEEc-CCCcEEEEEccCCC
Q 018248 200 -GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ-WLAASS-DKGTVHVFGLKVDS 256 (359)
Q Consensus 200 -g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~i~iw~~~~~~ 256 (359)
+. +.++|+.+.+.+..+..+ .....++|+|||+ .+++.. .++.|.++|+.+.+
T Consensus 293 ~~~-~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 293 AEN-TSSVTASVGQTSGPISNG---HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEE-EEEEESSSCCEEECCEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred CCC-EEEEECCCCeEEEEEECC---CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 35 679999999999988763 3688999999998 455555 58999999999876
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.28 E-value=9.8e-09 Score=94.18 Aligned_cols=228 Identities=10% Similarity=0.057 Sum_probs=133.3
Q ss_pred CCEEEEec-CCceEEEEcCCCcceeeeecccCCC------CceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEe
Q 018248 18 HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPR------GGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLG 90 (359)
Q Consensus 18 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~ 90 (359)
+..+++++ ++.|..+|.++++.+.......... ...........+..+++.+ .|+.|..+|..+|+.+.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~----~dg~l~AlDa~TG~~~W 145 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV----LDGRLEAIDAKTGQRAW 145 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC----TTSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEc----cCCEEEEEECCCCCEee
Confidence 44565666 8999999999999887765420000 0000011122355565555 58999999999999988
Q ss_pred eeccC------cceeEEEEecceeEEE-e-------cCeEEEEEcccceeeeeEeccC-CC-------------------
Q 018248 91 ELSFR------SEVKNVRLRRDRIVVV-L-------NQKVYVYNFTDLKLVDQIETVV-NP------------------- 136 (359)
Q Consensus 91 ~~~~~------~~v~~~~~~~~~~~~~-~-------d~~i~i~d~~~~~~~~~~~~~~-~~------------------- 136 (359)
.+... ..+.+.-.-.++.+++ . ++.|+.||.++|+.+..+.... .+
T Consensus 146 ~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 146 SVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred eecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 77632 1221111112566665 2 6899999999999988775311 00
Q ss_pred -----------ceeeeeecCCCccEEEecCCCCe-------------------eEEEEec-CCeeeEEeec--cc-----
Q 018248 137 -----------TGLCDVSQNAGPMVMACPGLLKG-------------------QVRVEDY-GTKKSKYITA--HA----- 178 (359)
Q Consensus 137 -----------~~~~~~~~~~~~~~l~~~g~~d~-------------------~v~~~~~-~~~~~~~~~~--~~----- 178 (359)
....++.+..+.+++. ..++ .|..++. +++.+-.++. |.
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~---~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~ 302 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIG---VGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYT 302 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEE---CCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCC
T ss_pred eeeecCCCCccccceeEcCCCCEEEEe---CCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccccc
Confidence 0134566665543333 2343 2555554 4555555443 21
Q ss_pred --ccccEEEEccCCc---EEEEEeCCCCeEEEEEcCCCcEEEEeecCCC--------------------------Cc---
Q 018248 179 --SRIASIAMTLDGR---FVATASSKGTLIRVFNTMDGSLLQEMRRGAE--------------------------RA--- 224 (359)
Q Consensus 179 --~~i~~~~~s~~~~---~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~--------------------------~~--- 224 (359)
.++.......+|+ .++.++.+|. ++++|..+|+.+...+.... ..
T Consensus 303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~ 381 (689)
T 1yiq_A 303 ATQHMILAELPIDGKPRKVLMQAPKNGF-FYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLV 381 (689)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEE
T ss_pred CCCCcEEEeeccCCcEEEEEEEECCCCe-EEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEe
Confidence 1111222223665 7889999999 99999999998854432110 00
Q ss_pred --------ceEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 018248 225 --------EIYSLAFSSNAQWLAASSDKGTVHVFGLK 253 (359)
Q Consensus 225 --------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 253 (359)
.-..++++|+..++++...+....++...
T Consensus 382 ~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~ 418 (689)
T 1yiq_A 382 TPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIP 418 (689)
T ss_dssp SSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCS
T ss_pred CCCcccccCCCcceECCCCCEEEEeccccceeeeecc
Confidence 01126888888888888776655555443
No 229
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.26 E-value=1.3e-09 Score=90.96 Aligned_cols=261 Identities=11% Similarity=0.045 Sum_probs=151.2
Q ss_pred ceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc
Q 018248 8 TIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR 87 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 87 (359)
.+.++...++|. |.+++++ +..+|. +++........ ........+. .+.+.+.+ .++.|..+|.. ++
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~-l~~~d~-~g~~~~~~~~~---~~~~~~~~~~--~~~l~v~t----~~~~l~~~d~~-g~ 127 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK-VYAINP-DGTEKWRFDTK---KAIVSDFTIF--EDILYVTS----MDGHLYAINTD-GT 127 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE-EEEECC-CGGGGGGSCC--------CCEEEE--TTEEEEEC----TTSEEEEECTT-SC
T ss_pred cccceEEecCCc-EEEecCc-EEEECC-CCcEEEEEECC---CCcccCceEE--CCEEEEEe----cCCEEEEEcCC-CC
Confidence 345566666664 4445544 777765 33333222221 1112222222 44455444 46889999977 77
Q ss_pred EEeeec-cCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEE
Q 018248 88 YLGELS-FRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVE 164 (359)
Q Consensus 88 ~~~~~~-~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~ 164 (359)
...... ....+.++...+++.+++ .++.|..+|.. ++....+......+..+....++. +.+. + +.+..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~--l~v~--t--~~l~~~ 200 (330)
T 3hxj_A 128 EKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT--IYFG--S--DKVYAI 200 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC--EEEE--S--SSEEEE
T ss_pred EEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE--EEEE--e--CEEEEE
Confidence 666665 444566677777777666 56899999987 777666665444444444444433 3333 2 556666
Q ss_pred ecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC
Q 018248 165 DYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK 244 (359)
Q Consensus 165 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 244 (359)
+.++............+.++...++|.+ ..++.++. |..+| .+++.+..+.. ....+..+.+.+++. |..++.+
T Consensus 201 d~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~g-l~~~~-~~g~~~~~~~~--~~~~~~~~~~~~~g~-l~v~t~~ 274 (330)
T 3hxj_A 201 NPDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGH-LYAIN-PDGTEKWRFKT--GKRIESSPVIGNTDT-IYFGSYD 274 (330)
T ss_dssp CTTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTE-EEEEC-TTSCEEEEEEC--SSCCCSCCEECTTSC-EEEECTT
T ss_pred CCCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCe-EEEEC-CCCCEeEEeeC--CCCccccceEcCCCe-EEEecCC
Confidence 6666666565555567888888888764 45666677 88887 46666666653 222334455555564 5556777
Q ss_pred CcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEE
Q 018248 245 GTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVI 324 (359)
Q Consensus 245 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 324 (359)
|.|..+|. +++.. ..+..+...+.++...+++ .|.+
T Consensus 275 ggl~~~d~-~g~~~------------------------------------------~~~~~~~~~~~~~~~d~~g-~l~~ 310 (330)
T 3hxj_A 275 GHLYAINP-DGTEK------------------------------------------WNFETGSWIIATPVIDENG-TIYF 310 (330)
T ss_dssp CEEEEECT-TSCEE------------------------------------------EEEECSSCCCSCCEECTTC-CEEE
T ss_pred CCEEEECC-CCcEE------------------------------------------EEEEcCCccccceEEcCCC-EEEE
Confidence 77888884 33310 0012233445556666665 5677
Q ss_pred EecCCeEEEEEeCC
Q 018248 325 VGLDGSYYKCEFDP 338 (359)
Q Consensus 325 ~~~dg~i~v~~~~~ 338 (359)
++.+|.+++...+.
T Consensus 311 gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 311 GTRNGKFYALFNLE 324 (330)
T ss_dssp ECTTSCEEEEEC--
T ss_pred EcCCCeEEEEeccc
Confidence 99999999886654
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.25 E-value=9.3e-10 Score=92.40 Aligned_cols=247 Identities=7% Similarity=-0.072 Sum_probs=152.5
Q ss_pred ceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecC-------CCCCCeEEEEECCCccEEeeeccC-----
Q 018248 28 GFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSG-------PHQSNKVMIWDDHENRYLGELSFR----- 95 (359)
Q Consensus 28 ~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~-------~~~d~~i~iwd~~~~~~~~~~~~~----- 95 (359)
.|.++|.++++.+..... |.. + .+.++++++.++++... . .++.|.+||+.+++.+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~v--G~~-P--~i~~spDg~~lyVan~~~~r~~~G~-~~~~VsviD~~T~~vv~~I~v~~~~~~ 120 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLG--AFL-S--LAVAGHSGSDFALASTSFARSAKGK-RTDYVEVFDPVTFLPIADIELPDAPRF 120 (368)
T ss_dssp EEEEEETTTTEEEEEEEE--CTT-C--EEEECTTSSCEEEEEEEETTTTSSS-EEEEEEEECTTTCCEEEEEEETTSCSC
T ss_pred eEEEEECCCCeEEEEEeC--CCC-C--ceEECCCCCEEEEEcccccccccCC-CCCEEEEEECCCCCEEEEEECCCcccc
Confidence 788999998877654444 332 3 68999999888877521 1 3589999999999999998732
Q ss_pred ---cceeEEEEecceeEEE--e---cCeEEE--EEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEe
Q 018248 96 ---SEVKNVRLRRDRIVVV--L---NQKVYV--YNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVED 165 (359)
Q Consensus 96 ---~~v~~~~~~~~~~~~~--~---d~~i~i--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~ 165 (359)
.....+.++|||++++ . ...+.+ +|+.+ +..+.... +..+.|+++..+++. +.|+.+.+.+
T Consensus 121 ~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~----~~~~~p~g~~~~~~~--~~dg~~~~vd 191 (368)
T 1mda_H 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS----CFHIHPGAAATHYLG--SCPASLAASD 191 (368)
T ss_dssp CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS----CCCCEEEETTEEECC--CCTTSCEEEE
T ss_pred ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC----ceEEccCCCeEEEEE--cCCCCEEEEE
Confidence 3567899999998776 2 457888 88866 44554322 133456666655543 3466555533
Q ss_pred cCC-----eeeE-----EeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc--EEEEeecC--------CCCcc
Q 018248 166 YGT-----KKSK-----YITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGS--LLQEMRRG--------AERAE 225 (359)
Q Consensus 166 ~~~-----~~~~-----~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~--~~~~~~~~--------~~~~~ 225 (359)
... ..+. .+.....+. . ++++..++..+. +. |.+.|..+.. .+..+... ..+..
T Consensus 192 ~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~-V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 192 LAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SS-ILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp CCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SC-CEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred CccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CE-EEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 332 1111 111112232 3 566666656666 88 9999986543 22222210 00111
Q ss_pred eEEEEecCCCCEEEEEcC---------CCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEec
Q 018248 226 IYSLAFSSNAQWLAASSD---------KGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSS 296 (359)
Q Consensus 226 i~~~~~s~~~~~l~~~~~---------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (359)
...++++||++.++.+.. ++.+.++|+.+.+... .
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~----------------------------~-------- 309 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG----------------------------P-------- 309 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE----------------------------C--------
T ss_pred ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEE----------------------------E--------
Confidence 122689999998876543 2356799999876210 0
Q ss_pred ccceeEEeecCCcEEEeeecccCCEE-EEEe-cCCeEEEEEeCC
Q 018248 297 KWSMAQFRLPENVQYLVGFGRQNNTI-VIVG-LDGSYYKCEFDP 338 (359)
Q Consensus 297 ~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~-~dg~i~v~~~~~ 338 (359)
+.++ .....++|+|||+.+ ++.. .++.|.++++..
T Consensus 310 ------i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 310 ------ISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp ------CEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred ------EECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 1111 134689999999854 4444 489999998865
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.24 E-value=2.2e-08 Score=87.82 Aligned_cols=190 Identities=14% Similarity=0.088 Sum_probs=131.2
Q ss_pred EEEec-----cCCEEEEEecCCCCCCeEEEEECCCccEEeeec--cCcceeEEEE-e-cceeEEE-e-------------
Q 018248 56 VSMLF-----RSNIICLVNSGPHQSNKVMIWDDHENRYLGELS--FRSEVKNVRL-R-RDRIVVV-L------------- 112 (359)
Q Consensus 56 ~~~~~-----~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~-~-~~~~~~~-~------------- 112 (359)
..+++ +++++++... .+..|.+.|+.+.++...+. ....+..+++ + |++.+++ .
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~---~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~ 166 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDK---ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTN 166 (595)
T ss_dssp EEEEEETTEEEEEEEEEEET---TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSS
T ss_pred cccCCCCCCcCCCEEEEEcC---CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcc
Confidence 55555 5566665443 46889999999999888444 4566888887 4 8887776 2
Q ss_pred -------cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCC------------e--------------
Q 018248 113 -------NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLK------------G-------------- 159 (359)
Q Consensus 113 -------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d------------~-------------- 159 (359)
++.+.+.|..+.+...++....+ ...++++|+++..++.+-.++. .
T Consensus 167 l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~-pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v 245 (595)
T 1fwx_A 167 MEDVANYVNVFTAVDADKWEVAWQVLVSGN-LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI 245 (595)
T ss_dssp TTCGGGEEEEEEEEETTTTEEEEEEEESSC-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH
T ss_pred cccccccCceEEEEECCCCeEEEEEEeCCC-ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEec
Confidence 34899999999999998876554 4568899998876665532211 1
Q ss_pred ---------eEEEEecCC---ee-eEEeecccccccEEEEccCCcEEEEEe-CCCCeEEEEEcCCCc------------E
Q 018248 160 ---------QVRVEDYGT---KK-SKYITAHASRIASIAMTLDGRFVATAS-SKGTLIRVFNTMDGS------------L 213 (359)
Q Consensus 160 ---------~v~~~~~~~---~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~~~------------~ 213 (359)
.|.+-+... .. +..+.. .....++.++|||+++++++ .+.. |.++|+.+.+ .
T Consensus 246 ~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~-VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 246 AAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPT-VTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp HHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSB-EEEEEGGGHHHHHHSCCCGGGGE
T ss_pred cCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCe-EEEEECcccccccccccCcccce
Confidence 233322222 22 233332 23567899999999887776 4566 9999998653 3
Q ss_pred EEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 018248 214 LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 214 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 254 (359)
..++.. ......++|+|+|...++.-.|++|.+||++.
T Consensus 324 ~~~v~v---G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 324 VAEPEL---GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EECCBC---CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEEcCC---CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 445543 24688999999995556667899999999987
No 232
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.21 E-value=1.3e-07 Score=80.53 Aligned_cols=219 Identities=9% Similarity=0.042 Sum_probs=132.6
Q ss_pred CCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccC
Q 018248 17 DHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFR 95 (359)
Q Consensus 17 ~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~ 95 (359)
++..+.+++ ++.|..+|.++++......+. ........+ .++.+++.+ .++.|..+|..+|+.+..+...
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~---~~~~~~p~~--~~~~v~v~~----~~g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVA---GEALSRPVV--SDGLVLIHT----SNGQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECS---SCCCSCCEE--ETTEEEEEC----TTSEEEEEETTTCCEEEEEECC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCC---CceEcCCEE--ECCEEEEEc----CCCeEEEEECCCCcEEEEEeCC
Confidence 344566666 899999999998887766653 111111111 244555545 5799999999999988887643
Q ss_pred cce------eEEEEecceeEEE--ecCeEEEEEcccceeeeeEeccCCCce-------eeeeec--CCCccEEEecCCCC
Q 018248 96 SEV------KNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETVVNPTG-------LCDVSQ--NAGPMVMACPGLLK 158 (359)
Q Consensus 96 ~~v------~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~l~~~g~~d 158 (359)
..+ ...... ++.+++ .++.+..+|..+++.+........... .+...| .+..+ ++ ++.+
T Consensus 173 ~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v-~~--~~~~ 248 (376)
T 3q7m_A 173 MPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVV-FA--LAYN 248 (376)
T ss_dssp C-----CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEE-EE--ECTT
T ss_pred CCceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEE-EE--EecC
Confidence 333 222233 455555 688999999999988877654321000 000111 22332 22 3356
Q ss_pred eeEEEEec-CCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCE
Q 018248 159 GQVRVEDY-GTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQW 237 (359)
Q Consensus 159 ~~v~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 237 (359)
+.+..++. +++.+.... ......+.. ++..++.++.++. |..+|..+++.+...... ....+..... .+..
T Consensus 249 g~l~~~d~~tG~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~-l~~~d~~tG~~~w~~~~~-~~~~~~~~~~--~~~~ 320 (376)
T 3q7m_A 249 GNLTALDLRSGQIMWKRE--LGSVNDFIV--DGNRIYLVDQNDR-VMALTIDGGVTLWTQSDL-LHRLLTSPVL--YNGN 320 (376)
T ss_dssp SCEEEEETTTCCEEEEEC--CCCEEEEEE--ETTEEEEEETTCC-EEEEETTTCCEEEEECTT-TTSCCCCCEE--ETTE
T ss_pred cEEEEEECCCCcEEeecc--CCCCCCceE--ECCEEEEEcCCCe-EEEEECCCCcEEEeeccc-CCCcccCCEE--ECCE
Confidence 77777555 455443332 222333433 4567778888998 999999999988766521 1112222233 2567
Q ss_pred EEEEcCCCcEEEEEccCCC
Q 018248 238 LAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 238 l~~~~~dg~i~iw~~~~~~ 256 (359)
|+.++.+|.|.++|.++++
T Consensus 321 l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 321 LVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EEEECTTSEEEEEETTTCC
T ss_pred EEEEeCCCeEEEEECCCCc
Confidence 8888899999999999876
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.20 E-value=1.9e-08 Score=79.89 Aligned_cols=218 Identities=10% Similarity=0.036 Sum_probs=141.4
Q ss_pred ccEEeeeccCcc--eeEEEEecceeEEE-e----cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCC
Q 018248 86 NRYLGELSFRSE--VKNVRLRRDRIVVV-L----NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLK 158 (359)
Q Consensus 86 ~~~~~~~~~~~~--v~~~~~~~~~~~~~-~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 158 (359)
.+.+.++.|... ...+.|++++.+.. . ++.|.++|+.+++.+..+...... ....+.++++.++.+. -.+
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~~g~~lyv~t--~~~ 85 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-FGEGLTLLNEKLYQVV--WLK 85 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-CEEEEEEETTEEEEEE--TTC
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-ceEEEEEeCCEEEEEE--ecC
Confidence 456667776643 57999999775555 2 479999999999999888654332 2234555566655554 357
Q ss_pred eeEEEEec-CCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCc---ceEEEEecCC
Q 018248 159 GQVRVEDY-GTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERA---EIYSLAFSSN 234 (359)
Q Consensus 159 ~~v~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~---~i~~~~~s~~ 234 (359)
+.+.+++. +.+.+..+... . -....+++||+.|+++..++. |.++|..+.+.+..+..+.... .++.+.|. +
T Consensus 86 ~~v~viD~~t~~v~~~i~~g-~-~~g~glt~Dg~~l~vs~gs~~-l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQ-M-KDGWGLATDGKILYGSDGTSI-LYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp SEEEEEETTTTEEEEEEECC-S-SSCCEEEECSSSEEEECSSSE-EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CEEEEEECCCCcEEEEEECC-C-CCeEEEEECCCEEEEECCCCe-EEEEECCCCcEEEEEEECCCCcccccceeEEEE-C
Confidence 88888665 45666666533 1 123446678887777777788 9999999999888887542222 36788888 7
Q ss_pred CCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEee
Q 018248 235 AQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVG 314 (359)
Q Consensus 235 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 314 (359)
|+..+....++.|.+.|..+++... .+.+ .+..+.... . -.......+.++
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V~~----------------------~I~~-~g~~~~~~~-~-----~~~~~~v~nGIa 212 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTLLG----------------------WILL-PNLRKKLID-E-----GFRDIDVLNGIA 212 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCEEE----------------------EEEC-HHHHHHHHH-T-----TCTTCCCEEEEE
T ss_pred CEEEEecCCCCeEEEEECCCCcEEE----------------------EEEC-CCccccccc-c-----cccccCceEEEE
Confidence 7666666667899999999987210 0000 000000000 0 000113568999
Q ss_pred ecccCCEEEEEe-cCCeEEEEEeCCC
Q 018248 315 FGRQNNTIVIVG-LDGSYYKCEFDPM 339 (359)
Q Consensus 315 ~s~~~~~l~~~~-~dg~i~v~~~~~~ 339 (359)
|+|+++.+++++ ..+++++-++.+.
T Consensus 213 ~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 213 WDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999987766666 5888998888654
No 234
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.19 E-value=2.8e-08 Score=91.20 Aligned_cols=232 Identities=11% Similarity=0.056 Sum_probs=143.6
Q ss_pred CCEEEEec-CCceEEEEcCCCcceeeeecccCCC---CceeEEEEeccCCEEEEEecCCC--CCCeEEEEECCCccEEee
Q 018248 18 HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPR---GGTQLVSMLFRSNIICLVNSGPH--QSNKVMIWDDHENRYLGE 91 (359)
Q Consensus 18 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~~~~~~~~~~--~d~~i~iwd~~~~~~~~~ 91 (359)
+..+++++ |+.+..+|.++++.+...... .+. ..+...-.. ..+.+++...+.. .++.|..||..+|+.+..
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~-~~~~~~~~~~~sP~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTR-ADHKRSYTITGAPRV-VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECC-SCTTSCCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCc-CCCCCCccccCCcEE-ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 45677777 999999999999888766541 011 111110011 1344444332210 268999999999998877
Q ss_pred ecc-C-c------------------------------ceeEEEEecceeEEE---ecC-------------------eEE
Q 018248 92 LSF-R-S------------------------------EVKNVRLRRDRIVVV---LNQ-------------------KVY 117 (359)
Q Consensus 92 ~~~-~-~------------------------------~v~~~~~~~~~~~~~---~d~-------------------~i~ 117 (359)
+.. . . ....++++|+...++ .++ .|.
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 641 1 0 012467787655444 333 499
Q ss_pred EEEcccceeeeeEeccCCCc---------eeeeeecCCCc-cEEEecCCCCeeEEEEecC-CeeeEEeeccc--------
Q 018248 118 VYNFTDLKLVDQIETVVNPT---------GLCDVSQNAGP-MVMACPGLLKGQVRVEDYG-TKKSKYITAHA-------- 178 (359)
Q Consensus 118 i~d~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~l~~~g~~d~~v~~~~~~-~~~~~~~~~~~-------- 178 (359)
.+|..+|+.+..++...... ....+..+++. .+++. ++.+|.+++++.. ++.+.......
T Consensus 279 AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~-~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~ 357 (689)
T 1yiq_A 279 AVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQ-APKNGFFYVIDRATGELLSAKGIVPQSWTKGMD 357 (689)
T ss_dssp EEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEE-CCTTSEEEEEETTTCCEEEEEESSCCSSEEEEE
T ss_pred EEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEE-ECCCCeEEEEECCCCCEeccccccccccccccC
Confidence 99999999998886532211 11122223331 13444 6789999996654 44432211000
Q ss_pred -------------------------------ccccEEEEccCCcEEEEEeC-----------------------------
Q 018248 179 -------------------------------SRIASIAMTLDGRFVATASS----------------------------- 198 (359)
Q Consensus 179 -------------------------------~~i~~~~~s~~~~~l~~~~~----------------------------- 198 (359)
..-..++++|+..++++...
T Consensus 358 ~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 437 (689)
T 1yiq_A 358 MKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG 437 (689)
T ss_dssp TTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred ccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccc
Confidence 00123788998887776532
Q ss_pred ----------------CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 199 ----------------KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 199 ----------------dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
+|. |..||+.+++.+-++..+ .++..-.++..+.+++.++.||.++.||.++++
T Consensus 438 ~~p~~~~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 438 MMPEGAEGLLEMAKSWSGK-LIAWDPVKQQAAWEVPYV---TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp CCCSSHHHHHHHHTTCEEE-EEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccCcccccCCCCCCCccee-EEEEECCCCCeEeEccCC---CCccCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 377 999999999998888753 233334556678899999999999999999987
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.16 E-value=1.8e-07 Score=75.45 Aligned_cols=230 Identities=4% Similarity=-0.069 Sum_probs=138.1
Q ss_pred CCEEEEecCCceEEEEcCCCccee---eeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-
Q 018248 18 HGCFATGTETGFRVYLSDPYKPIM---RRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS- 93 (359)
Q Consensus 18 g~~l~~~~d~~i~iw~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~- 93 (359)
|.+|..+..+.|+.++++...... ...+. ........+++.+..+.+.++.. ..+.|..++...+.....+.
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~---~~~~I~~~~~~g~~~~~~~~~ 76 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDI---SEPSIGRASLHGGEPTTIIRQ 76 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEET---TTTEEEEEESSSCCCEEEECT
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEEC---CCCEEEEEecCCCCcEEEEEC
Confidence 456666665678888887543210 01110 00233456777776677776654 35899999987654433333
Q ss_pred cCcceeEEEEecce-eEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCe
Q 018248 94 FRSEVKNVRLRRDR-IVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK 169 (359)
Q Consensus 94 ~~~~v~~~~~~~~~-~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~ 169 (359)
.......+++++++ .+.+ ..+.|.++++..................+++.|++..++++..+...+.|.....++.
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 22567899999864 4443 5678999998543222222222233466888887776666543222467777777765
Q ss_pred eeEEee-cccccccEEEEccCCcEEEEEeC-CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcE
Q 018248 170 KSKYIT-AHASRIASIAMTLDGRFVATASS-KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTV 247 (359)
Q Consensus 170 ~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 247 (359)
....+. ..-.....++++|++..|..+.. .+. |.++|.........+.. ......++.. ++.++++....+.|
T Consensus 157 ~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~-I~~~~~~g~~~~~~~~~---~~~P~gi~~d-~~~lyva~~~~~~v 231 (267)
T 1npe_A 157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR-AECLNPAQPGRRKVLEG---LQYPFAVTSY-GKNLYYTDWKTNSV 231 (267)
T ss_dssp CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTEEEEEEEEEC---CCSEEEEEEE-TTEEEEEETTTTEE
T ss_pred CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE-EEEEecCCCceEEEecC---CCCceEEEEe-CCEEEEEECCCCeE
Confidence 544442 22345788999998776665554 456 99999865443333332 2344667664 34445555566889
Q ss_pred EEEEccCCC
Q 018248 248 HVFGLKVDS 256 (359)
Q Consensus 248 ~iw~~~~~~ 256 (359)
.++|..+++
T Consensus 232 ~~~d~~~g~ 240 (267)
T 1npe_A 232 IAMDLAISK 240 (267)
T ss_dssp EEEETTTTE
T ss_pred EEEeCCCCC
Confidence 999988765
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.11 E-value=6e-07 Score=72.41 Aligned_cols=216 Identities=6% Similarity=-0.030 Sum_probs=133.6
Q ss_pred ceEEEEEccCCCEEEEec--CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 8 TIHHLALNQDHGCFATGT--ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
.+..++|++++..|..+. ++.|..++.+...... .+. ........+++.+.+..+.++.. ..+.|.+++...
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~--~~~-~~~~~p~~ia~d~~~~~lyv~d~---~~~~I~~~~~~g 110 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT--IIR-QDLGSPEGIALDHLGRTIFWTDS---QLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE--EEC-TTCCCEEEEEEETTTTEEEEEET---TTTEEEEEETTS
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE--EEE-CCCCCccEEEEEecCCeEEEEEC---CCCEEEEEEcCC
Confidence 456899999776665555 7889999987643321 121 11245567778776666666654 358999999764
Q ss_pred ccEEeeec-cCcceeEEEEecc-eeEEE---e--cCeEEEEEcccceeeeeEe-ccCCCceeeeeecCCCccEEEecCCC
Q 018248 86 NRYLGELS-FRSEVKNVRLRRD-RIVVV---L--NQKVYVYNFTDLKLVDQIE-TVVNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 86 ~~~~~~~~-~~~~v~~~~~~~~-~~~~~---~--d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
........ .......++++|+ +.+.+ . .+.|..+++. ++....+. ........++++++++.++++.. .
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~--~ 187 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD-GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDA--G 187 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT-SCCCEEEECTTCSCEEEEEEETTTTEEEEEET--T
T ss_pred CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC-CCCcEEEEECCCCCCcEEEEcCCCCEEEEEEC--C
Confidence 43222222 2246789999995 54444 2 3688888874 33333332 22233456888888777666643 4
Q ss_pred CeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEe-CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCC
Q 018248 158 KGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATAS-SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ 236 (359)
Q Consensus 158 d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 236 (359)
.+.|.+.+.++.....+.........++.. +..|+.+. ..+. |..+|..+++.+..+..+. ......+++.|++.
T Consensus 188 ~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~-v~~~d~~~g~~~~~i~~g~-~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 188 THRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNS-VIAMDLAISKEMDTFHPHK-QTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTE-EEEEETTTTEEEEEECCSS-CCCCCCEEEECSCC
T ss_pred CCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCe-EEEEeCCCCCceEEEcccc-ccccceeeecCccC
Confidence 567888777765444433222334566653 45555555 4566 9999999999988886532 12467788888764
No 237
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.10 E-value=2.9e-07 Score=73.18 Aligned_cols=195 Identities=11% Similarity=0.044 Sum_probs=132.2
Q ss_pred eeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCc--ceeEEEEecceeEEE--ecCeEEEEEcccceeee
Q 018248 53 TQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRS--EVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVD 128 (359)
Q Consensus 53 v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~ 128 (359)
...+.++++ ..+..+++.. .++.|.++|+.+++.+..+.... ....+++..+..+++ .++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~~d-g~Lyvstg~~-~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAEN-DTLFESTGLY-GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECST-TEEEEEECST-TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCC-CeEEEECCCC-CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEE
Confidence 456677665 3444443322 35899999999999999886333 233556665444444 78999999999999999
Q ss_pred eEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCC-eeeEEeeccc-----ccccEEEEccCCcEEEEEeCCCCe
Q 018248 129 QIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT-KKSKYITAHA-----SRIASIAMTLDGRFVATASSKGTL 202 (359)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~-~~~~~~~~~~-----~~i~~~~~s~~~~~l~~~~~dg~~ 202 (359)
++... .+ .-..++++++.++++ . .++.|.+.+... +.+..+.-.. ..++.+.|. +|...+....++.
T Consensus 101 ~i~~g-~~-~g~glt~Dg~~l~vs--~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~- 173 (266)
T 2iwa_A 101 NFTHQ-MK-DGWGLATDGKILYGS--D-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC- 173 (266)
T ss_dssp EEECC-SS-SCCEEEECSSSEEEE--C-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE-
T ss_pred EEECC-CC-CeEEEEECCCEEEEE--C-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe-
Confidence 88754 12 235577888775543 2 367888865544 5555554221 135678887 7765555545677
Q ss_pred EEEEEcCCCcEEEEeecCC-----------CCcceEEEEecCCCCE-EEEEcCCCcEEEEEccCCC
Q 018248 203 IRVFNTMDGSLLQEMRRGA-----------ERAEIYSLAFSSNAQW-LAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~-l~~~~~dg~i~iw~~~~~~ 256 (359)
|.+.|..+++.+..+.... .....+.++|+|+++. ++++...+.+.+.++....
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 9999999999998887420 0125689999999865 5566678889999987754
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.09 E-value=3.5e-08 Score=82.25 Aligned_cols=217 Identities=10% Similarity=0.008 Sum_probs=142.5
Q ss_pred CCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cC
Q 018248 18 HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FR 95 (359)
Q Consensus 18 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~ 95 (359)
+..+.+++ ++.+..+|.+ ++........ ...+..+....++ .+.+.+ .++.|..+|.. ++.+..+. ..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~---~~~~~~~~~~~~g-~l~vgt----~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTK---KAIYATPIVSEDG-TIYVGS----NDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECS---SCCCSCCEECTTS-CEEEEC----TTSEEEEECTT-SCEEEEEECSS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCC---CceeeeeEEcCCC-EEEEEc----CCCEEEEECCC-CCEeEEEecCC
Confidence 44566666 8999999988 6555444432 3333333333333 344444 46899999988 87777766 44
Q ss_pred cceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEe
Q 018248 96 SEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYI 174 (359)
Q Consensus 96 ~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~ 174 (359)
..+.++...+++.+.+ . +.|..+| .+++...........+..+...+++ .+++++ .++.+..++.++..+..+
T Consensus 177 ~~~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t---~~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG-TIYVTS---LDGHLYAINPDGTEKWRF 250 (330)
T ss_dssp CCCSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS-CEEEEE---TTTEEEEECTTSCEEEEE
T ss_pred CceeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCcceeceEECCCC-eEEEEc---CCCeEEEECCCCCEeEEe
Confidence 5677778878888777 6 9999999 6777776666555555556665554 333433 456676667777766666
Q ss_pred ecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 018248 175 TAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 175 ~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 254 (359)
......+..+.+.+++. |..++.+|. |..+|. +++.+..+.. ....+.++...++|++. .++.+|.+++...+.
T Consensus 251 ~~~~~~~~~~~~~~~g~-l~v~t~~gg-l~~~d~-~g~~~~~~~~--~~~~~~~~~~d~~g~l~-~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 251 KTGKRIESSPVIGNTDT-IYFGSYDGH-LYAINP-DGTEKWNFET--GSWIIATPVIDENGTIY-FGTRNGKFYALFNLE 324 (330)
T ss_dssp ECSSCCCSCCEECTTSC-EEEECTTCE-EEEECT-TSCEEEEEEC--SSCCCSCCEECTTCCEE-EECTTSCEEEEEC--
T ss_pred eCCCCccccceEcCCCe-EEEecCCCC-EEEECC-CCcEEEEEEc--CCccccceEEcCCCEEE-EEcCCCeEEEEeccc
Confidence 55555556667766665 567778878 999995 7877776654 33456777777788654 578899999988776
Q ss_pred CC
Q 018248 255 DS 256 (359)
Q Consensus 255 ~~ 256 (359)
.+
T Consensus 325 ~~ 326 (330)
T 3hxj_A 325 HH 326 (330)
T ss_dssp --
T ss_pred cc
Confidence 54
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.08 E-value=1e-10 Score=99.31 Aligned_cols=178 Identities=10% Similarity=0.025 Sum_probs=98.1
Q ss_pred cCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCC-
Q 018248 61 RSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNP- 136 (359)
Q Consensus 61 ~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~- 136 (359)
.++.+++.+ .|+.|..||..+|+.+..+.. ..+.+..+..++..++ .|+.|+.||.++++.+..+..+...
T Consensus 8 ~~~~v~~gs----~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVST----LDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEE----TTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEc----CCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 456666666 689999999999999988876 5565555566664444 6999999999888876665432110
Q ss_pred ce-eeeeecCCCccEEEecCCCCeeEEEEecC-CeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEE
Q 018248 137 TG-LCDVSQNAGPMVMACPGLLKGQVRVEDYG-TKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLL 214 (359)
Q Consensus 137 ~~-~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~ 214 (359)
+. ...+. .+.. +++ |+.++.++.++.. ++.+..+..+. ...++|++..+++++.++. |+.||.++|+.+
T Consensus 83 ~~~sp~~~-~~~~--v~~-g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~-v~a~d~~tG~~~ 153 (369)
T 2hz6_A 83 VQASPCRS-SDGI--LYM-GKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYT-ITMYDTKTRELR 153 (369)
T ss_dssp HTTCSCC--------CCC-CEEEEEEEEECCC--------------------------EEEEEEEEE-EECCCSSSSSCC
T ss_pred cccCceEe-cCCE--EEE-EeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCE-EEEEECCCCCEE
Confidence 10 11111 2222 333 5578889887765 55554444432 2355678889999999999 999999999876
Q ss_pred EEeecCCCCcceEEEEecCCC---CEEEEEcCCCcEEEEEccCCC
Q 018248 215 QEMRRGAERAEIYSLAFSSNA---QWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 215 ~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~iw~~~~~~ 256 (359)
..+... .....+++++. ..+++++.+|.|+.||.++++
T Consensus 154 W~~~~~----~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 154 WNATYF----DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp CEEEEE----EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred EeEecc----cccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 665431 11223344432 456678889999999999876
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.05 E-value=2.2e-08 Score=87.81 Aligned_cols=233 Identities=13% Similarity=0.062 Sum_probs=153.4
Q ss_pred cCCCEEEEec--CCceEEEEcCCCcceeeeecccCCCCceeEEEE-e-ccCCEEEEEec---------------CCCCCC
Q 018248 16 QDHGCFATGT--ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSM-L-FRSNIICLVNS---------------GPHQSN 76 (359)
Q Consensus 16 ~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~~~~~~~~---------------~~~~d~ 76 (359)
+||+++.+.. ++.|.+.|+++.+......+. .......+++ . |+.++++..+. .. .++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip--~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~-~~~ 175 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIP--NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVAN-YVN 175 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECS--SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGG-EEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCC--CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccc-cCc
Confidence 4899887766 667999999987765444553 1234556665 4 77888766531 11 457
Q ss_pred eEEEEECCCccEEeeeccCcceeEEEEecceeEEE--e-c--------------------------------------Ce
Q 018248 77 KVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV--L-N--------------------------------------QK 115 (359)
Q Consensus 77 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~-d--------------------------------------~~ 115 (359)
.+.++|..+.+.+.++...+....++++|+|++++ . + +.
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred eEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 89999999999998888545677888999887776 1 1 23
Q ss_pred EEEEEccc--cee-eeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCe-------------eeEEeecccc
Q 018248 116 VYVYNFTD--LKL-VDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK-------------KSKYITAHAS 179 (359)
Q Consensus 116 i~i~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~-------------~~~~~~~~~~ 179 (359)
|.+.|..+ ++. +..+..... ...+.++||++..++ ++..+.+|.+++.... ....+. -..
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~-PhGv~~sPDGk~v~V--~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~ 331 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANN-PHGCNMAPDKKHLCV--AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGL 331 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESS-CCCEEECTTSSEEEE--ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCS
T ss_pred EEEEeCcccCCceeEEEEecCCC-ceEEEEcCCCCEEEE--eCCCCCeEEEEECcccccccccccCcccceEEEcC-CCC
Confidence 67777766 444 445544333 356899999987433 3666888999777643 122222 234
Q ss_pred cccEEEEccCCcEEEEEeCCCCeEEEEEcCC----------CcEEEEeecCCCCcce---EEEEecCCCCEEEEEcC---
Q 018248 180 RIASIAMTLDGRFVATASSKGTLIRVFNTMD----------GSLLQEMRRGAERAEI---YSLAFSSNAQWLAASSD--- 243 (359)
Q Consensus 180 ~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~----------~~~~~~~~~~~~~~~i---~~~~~s~~~~~l~~~~~--- 243 (359)
....++|+|+|...++...|+. |.+||+.+ .+.+..+..+..++.. ..+.++|||++|+++..
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsq-V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~sk 410 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQ-VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSK 410 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTE-EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCT
T ss_pred CcceEEECCCCeEEEEEecCCc-EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCc
Confidence 5688999999944445556777 99999977 5677777763211111 12356899999988753
Q ss_pred CCc----------EEEEEccCCC
Q 018248 244 KGT----------VHVFGLKVDS 256 (359)
Q Consensus 244 dg~----------i~iw~~~~~~ 256 (359)
|+. -.++|+..++
T Consensus 411 dr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 411 DRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp TSSCCCCSSCCEEEEEEECSSSS
T ss_pred cccccCCCCCCCcceEEEcCCCc
Confidence 332 1788885544
No 241
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.03 E-value=2.8e-08 Score=83.45 Aligned_cols=229 Identities=7% Similarity=-0.031 Sum_probs=136.9
Q ss_pred CCCceEEEEEccCCCEEEEec------CCceEEEEcCCCcceeeeeccc---CCCCceeEEEEeccCCEEEEEecCCCCC
Q 018248 5 DPITIHHLALNQDHGCFATGT------ETGFRVYLSDPYKPIMRRDFDR---NPRGGTQLVSMLFRSNIICLVNSGPHQS 75 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~------d~~i~iw~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~~~~~d 75 (359)
+-..+..++++++|+++++.. ++.|.+||+++++......+.. .+......+++.++...+.+...+...+
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence 456899999999998777654 3689999998776443333320 1123346677776555554443210014
Q ss_pred CeEEEEECCCccEEeeec-cCccee-EEEEecceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccE
Q 018248 76 NKVMIWDDHENRYLGELS-FRSEVK-NVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMV 150 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~~-~~~~v~-~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (359)
+.|.+||+.+++..+.+. |..... ...+.+++..+. .++.++.|. .....++++|+++.++
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLY 210 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEE
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee--------------cccceeEeccCCCEEE
Confidence 899999999888776654 211110 133344444332 344443332 1235688999887655
Q ss_pred EEecCCCCeeEEEEecC----Ce-----eeE--EeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 151 MACPGLLKGQVRVEDYG----TK-----KSK--YITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 151 l~~~g~~d~~v~~~~~~----~~-----~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
++.. ....+...+.. .. ... ...++......++++++|.++++...++. |.+||..+++.......
T Consensus 211 ~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~-V~~~d~~~G~~~~~~~~ 287 (343)
T 2qe8_A 211 LSPM--HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSA-IGVITSADRAYKLLVTD 287 (343)
T ss_dssp EEES--SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTE-EEEEETTTTEEEEEEEC
T ss_pred EEeC--CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCe-EEEEECCCCCEEEEEEC
Confidence 5542 23344433211 00 000 11234456778999999998888888888 99999856764433332
Q ss_pred CCCCcceEEEEecCCCCEEEEEcCCCcEEEEE
Q 018248 220 GAERAEIYSLAFSSNAQWLAASSDKGTVHVFG 251 (359)
Q Consensus 220 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 251 (359)
.....+.+++|.++++++++.+..+.+.+|.
T Consensus 288 -~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 288 -EKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp -GGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred -CceecCCeeEECCCCcEEEEeCccccccccc
Confidence 1235689999999999888877655444443
No 242
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.00 E-value=1.2e-06 Score=78.63 Aligned_cols=194 Identities=9% Similarity=0.086 Sum_probs=112.0
Q ss_pred CCCEEEEec-CCceEEEEc-CCCcceeeeecccCCCCcee--------EEEEeccCCEEEEEecCCCCCCeEEEEECCCc
Q 018248 17 DHGCFATGT-ETGFRVYLS-DPYKPIMRRDFDRNPRGGTQ--------LVSMLFRSNIICLVNSGPHQSNKVMIWDDHEN 86 (359)
Q Consensus 17 ~g~~l~~~~-d~~i~iw~~-~~~~~~~~~~~~~~h~~~v~--------~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 86 (359)
++..+++.. ++.|.-+|. ++++.+....+. ....+. .......+..+++.+ .|+.|..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~~----~dg~l~alD~~tG 135 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPK--QDASTKAVMCCDVVDRGLAYGAGQIVKKQ----ANGHLLALDAKTG 135 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCC--CCGGGGGGCTTCSCCCCCEEETTEEEEEC----TTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCC--CCccccccccccccccccEEECCEEEEEe----CCCEEEEEECCCC
Confidence 444455555 688999999 898888776653 100000 001112345555555 5799999999999
Q ss_pred cEEeeeccCc-----ceeE-EEEecceeEEE--e------cCeEEEEEcccceeeeeEeccCCCc---------------
Q 018248 87 RYLGELSFRS-----EVKN-VRLRRDRIVVV--L------NQKVYVYNFTDLKLVDQIETVVNPT--------------- 137 (359)
Q Consensus 87 ~~~~~~~~~~-----~v~~-~~~~~~~~~~~--~------d~~i~i~d~~~~~~~~~~~~~~~~~--------------- 137 (359)
+.+....... .+.+ .... ++.+++ . ++.|+.+|.++++.+..+.......
T Consensus 136 ~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 214 (571)
T 2ad6_A 136 KINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHY 214 (571)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred CEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccc
Confidence 9988776322 2221 1122 455555 3 6899999999999988876432110
Q ss_pred -----------------------eeeeeecCCCccEEEecCC----------CC----eeEEE-EecCCeeeEEeec--c
Q 018248 138 -----------------------GLCDVSQNAGPMVMACPGL----------LK----GQVRV-EDYGTKKSKYITA--H 177 (359)
Q Consensus 138 -----------------------~~~~~~~~~~~~~l~~~g~----------~d----~~v~~-~~~~~~~~~~~~~--~ 177 (359)
..+++.+....+++.+ +. .+ +.|.. +..+++.+-.++. |
T Consensus 215 G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~-g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~ 293 (571)
T 2ad6_A 215 GQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGS-GNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPH 293 (571)
T ss_dssp CCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC-CCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTT
T ss_pred cccccccccCcccceecCCCCeeeeEEEcCCCCeEEEEC-CCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCC
Confidence 1133444444433333 21 11 23444 4445555544432 2
Q ss_pred cc----cccE---EEEccCCc---EEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 178 AS----RIAS---IAMTLDGR---FVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 178 ~~----~i~~---~~~s~~~~---~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
.. .+.. +...++|+ .++.++.+|. +.++|..+|+.+..++.
T Consensus 294 d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 294 DEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGI-LYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSE-EEEEETTTCCEEEEEES
T ss_pred cccccccCCCCEEEecccCCcEEEEEEEeCCCcE-EEEEECCCCCEEeeecc
Confidence 11 1111 22234774 6778888998 99999999998877654
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.97 E-value=4e-07 Score=71.50 Aligned_cols=184 Identities=13% Similarity=0.126 Sum_probs=120.2
Q ss_pred CCCce--eEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeE--EEEecceeEEE--ecCeEEEEEcc
Q 018248 49 PRGGT--QLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKN--VRLRRDRIVVV--LNQKVYVYNFT 122 (359)
Q Consensus 49 h~~~v--~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~--~d~~i~i~d~~ 122 (359)
|.... ..+.++ ++.+..+++.. ....|+++|+++++.+..+........ +....+..+++ .++.+.+||..
T Consensus 39 hd~~~ftqGL~~~--~~~LyestG~~-g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 39 HDTKAFTEGFFYR--NGYFYESTGLN-GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp CCTTCEEEEEEEE--TTEEEEEEEET-TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred CCCCcccceEEEE--CCEEEEECCCC-CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 44444 444544 45444444321 124899999999999999885555543 55555555555 69999999999
Q ss_pred cceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecC-CeeeEEeecc--c---ccccEEEEccCCcEEEEE
Q 018248 123 DLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-TKKSKYITAH--A---SRIASIAMTLDGRFVATA 196 (359)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~~~~~~~~~--~---~~i~~~~~s~~~~~l~~~ 196 (359)
+.+.+.++..... -..++++++.++ .+.| ++.|.+.+.. .+.+..+... . ..++.+.|. +|+..+..
T Consensus 116 t~~~~~ti~~~~e---G~glt~dg~~L~-~SdG--s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~ 188 (262)
T 3nol_A 116 NLRQVRSFNYDGE---GWGLTHNDQYLI-MSDG--TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANV 188 (262)
T ss_dssp TCCEEEEEECSSC---CCCEEECSSCEE-ECCS--SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred cCcEEEEEECCCC---ceEEecCCCEEE-EECC--CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEE
Confidence 9999999976442 345567776533 3323 5667775554 4555555432 1 234557776 77655555
Q ss_pred eCCCCeEEEEEcCCCcEEEEeecCC----------CCcceEEEEecCCCCEEEEEcC
Q 018248 197 SSKGTLIRVFNTMDGSLLQEMRRGA----------ERAEIYSLAFSSNAQWLAASSD 243 (359)
Q Consensus 197 ~~dg~~i~iwd~~~~~~~~~~~~~~----------~~~~i~~~~~s~~~~~l~~~~~ 243 (359)
-.+.. |.+.|.++++.+..+.... ...-.+.++|+|+++.|...+.
T Consensus 189 w~~~~-I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 189 WQTNK-IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTSSE-EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccCCe-EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 55667 9999999999988876421 1135689999998877666553
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.95 E-value=1.2e-06 Score=68.14 Aligned_cols=185 Identities=13% Similarity=0.166 Sum_probs=119.8
Q ss_pred CCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCccee--EEEEecceeEEE--ecCeEEEEEcccc
Q 018248 49 PRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVK--NVRLRRDRIVVV--LNQKVYVYNFTDL 124 (359)
Q Consensus 49 h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~--~d~~i~i~d~~~~ 124 (359)
|......--+.++++.+..+++.. ....|+.+|+.+++.+..+....... .+.+..+..+.+ .++.+.+||..+.
T Consensus 17 hd~~~ftqGL~~~~~~LyestG~~-g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 17 HDTTAFTEGLFYLRGHLYESTGET-GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp CCTTCCEEEEEEETTEEEEEECCT-TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTT
T ss_pred CCCccccccEEEECCEEEEECCCC-CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcC
Confidence 554433333334456555554432 34699999999999999988555543 345554444444 7999999999999
Q ss_pred eeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecC-CeeeEEeeccc-----ccccEEEEccCCcEEEEEeC
Q 018248 125 KLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-TKKSKYITAHA-----SRIASIAMTLDGRFVATASS 198 (359)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~~~~~~~~~~-----~~i~~~~~s~~~~~l~~~~~ 198 (359)
+.+.++..... -..++++++.++ ++.| ++.|.+.+.. .+.+..+.-.. ..++.+.+. +|+..+..-.
T Consensus 96 ~~~~ti~~~~~---Gwglt~dg~~L~-vSdg--s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 96 TPRARFRYPGE---GWALTSDDSHLY-MSDG--TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp EEEEEEECSSC---CCEEEECSSCEE-EECS--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred cEEEEEeCCCC---ceEEeeCCCEEE-EECC--CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 99999986543 245567776533 3323 5678875554 45555554321 234556664 6775555545
Q ss_pred CCCeEEEEEcCCCcEEEEeecCC-----------CCcceEEEEecCCCCEEEEEc
Q 018248 199 KGTLIRVFNTMDGSLLQEMRRGA-----------ERAEIYSLAFSSNAQWLAASS 242 (359)
Q Consensus 199 dg~~i~iwd~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~l~~~~ 242 (359)
+.. |.+.|.++++.+..+.... ...-.+.++++|+++.|...+
T Consensus 169 s~~-I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 169 TSR-IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTE-EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCe-EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 667 9999999999988876321 123568999999877665554
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.94 E-value=1.1e-06 Score=68.95 Aligned_cols=178 Identities=7% Similarity=0.018 Sum_probs=116.3
Q ss_pred eEEEEEccCCCEEEEec-CC--ceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 9 IHHLALNQDHGCFATGT-ET--GFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 9 v~~~~~s~~g~~l~~~~-d~--~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
...+.|+ ++.++.+.+ ++ .|+++|+++++......+. .......+.+.++.+..+.. .++.+.++|..+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~----~~~FgeGit~~g~~ly~ltw---~~~~v~v~D~~t 116 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG----KRYFGEGISDWKDKIVGLTW---KNGLGFVWNIRN 116 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC----TTCCEEEEEEETTEEEEEES---SSSEEEEEETTT
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC----CccceeEEEEeCCEEEEEEe---eCCEEEEEECcc
Confidence 4788898 666555555 55 7999999998877666652 33334445556777766654 469999999999
Q ss_pred ccEEeeeccCcceeEEEEecceeEEE---ecCeEEEEEcccceeeeeEeccC--CCc---eeeeeecCCCccEEEecCCC
Q 018248 86 NRYLGELSFRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKLVDQIETVV--NPT---GLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 86 ~~~~~~~~~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~l~~~g~~ 157 (359)
.+.+.++.....-..++ +++..++ .++.|.++|..+.+.+..+.... .++ +.+.+. ++ .++... - .
T Consensus 117 ~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~-w-~ 190 (262)
T 3nol_A 117 LRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANV-W-Q 190 (262)
T ss_dssp CCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEE-T-T
T ss_pred CcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEE-c-c
Confidence 99999998554334444 4555444 45679999999998888876532 122 234554 33 344332 3 3
Q ss_pred CeeEEE-EecCCeeeEEeecc------------cccccEEEEccCCcEEEEEeCCC
Q 018248 158 KGQVRV-EDYGTKKSKYITAH------------ASRIASIAMTLDGRFVATASSKG 200 (359)
Q Consensus 158 d~~v~~-~~~~~~~~~~~~~~------------~~~i~~~~~s~~~~~l~~~~~dg 200 (359)
++.|.+ +..+++.+..+... ....+.|+|+|+++.|.+.+..=
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 445555 66666666665431 13458899999988777766543
No 246
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.93 E-value=1.7e-09 Score=91.70 Aligned_cols=215 Identities=10% Similarity=0.022 Sum_probs=107.7
Q ss_pred CCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccC
Q 018248 17 DHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFR 95 (359)
Q Consensus 17 ~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~ 95 (359)
++..+++++ |+.|+.||..+++....... +.+....+..++..++..+ .|+.|+.||..+|+.+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~s----~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEEPAFLPDP----NDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-----CCEEECT----TTCCEEEC-----CCSEECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEcCCCEEEEeC----CCCEEEEEECCCCceeeeeecc
Confidence 567788888 99999999999988766553 2332222333333333323 5899999999899877665422
Q ss_pred --ccee-EEEEecceeEEE--ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecC-Ce
Q 018248 96 --SEVK-NVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-TK 169 (359)
Q Consensus 96 --~~v~-~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~ 169 (359)
..+. +..+..++.+++ .++.|+.||..+|+.+..+..+. ...++|+++.+++ ++.++.|+.|+.. ++
T Consensus 79 ~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~---~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 79 IPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYL---GRTEYTITMYDTKTRE 151 (369)
T ss_dssp HHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------------------EEE---EEEEEEEECCCSSSSS
T ss_pred CccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEE---EecCCEEEEEECCCCC
Confidence 1111 111113444443 78999999999999888776543 1344565554332 4468888887754 44
Q ss_pred eeEEeecccccccEEEEccCC---cEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceE-EEEecCCCCEE----EEE
Q 018248 170 KSKYITAHASRIASIAMTLDG---RFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIY-SLAFSSNAQWL----AAS 241 (359)
Q Consensus 170 ~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l----~~~ 241 (359)
.+..+..+. ....+++++. ..+++++.+|. |..||..+|+.+.++.. ..++. ...++++|... +.+
T Consensus 152 ~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~-v~a~d~~tG~~~W~~~~---~~pv~~~~~~~~dg~~~v~~~~~~ 225 (369)
T 2hz6_A 152 LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGL-VVTVDSESGDVLWIQNY---ASPVVAFYVWQREGLRKVMHINVA 225 (369)
T ss_dssp CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCE-EEEECTTTCCEEEEEEC---SSCEEEEEECTTSSCEEECCEEEE
T ss_pred EEEeEeccc--ccCccccCCccccceEEEECCCCE-EEEEECCCCcEEEEecC---CCceEEEEEecCCceEeccceeec
Confidence 433332211 1223344432 45677888999 99999999998887763 23443 34556666432 122
Q ss_pred cCCCcEEEEEccCC
Q 018248 242 SDKGTVHVFGLKVD 255 (359)
Q Consensus 242 ~~dg~i~iw~~~~~ 255 (359)
++.++.+|..++
T Consensus 226 --~~~l~~ld~~tG 237 (369)
T 2hz6_A 226 --VETLRYLTFMSG 237 (369)
T ss_dssp --HHHHHHHHHHHH
T ss_pred --ccceeeeehhcC
Confidence 334555665443
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.93 E-value=1.8e-07 Score=73.46 Aligned_cols=161 Identities=6% Similarity=-0.046 Sum_probs=112.5
Q ss_pred cEEeeeccCcc--eeEEEEecceeEEE--ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEE
Q 018248 87 RYLGELSFRSE--VKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVR 162 (359)
Q Consensus 87 ~~~~~~~~~~~--v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~ 162 (359)
+.+.++.|... ...+.|+.+..+.. .+|.|+++|+++++.+..+ ... ......+.++++.++.+. . .++.+.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g~~Ly~lt-w-~~~~v~ 119 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDGERLYQLT-W-TEGLLF 119 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECSSCEEEEE-S-SSCEEE
T ss_pred EEEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeCCEEEEEE-c-cCCEEE
Confidence 45666665543 47888886544444 6778999999999998887 433 333344667777777664 2 578888
Q ss_pred EEec-CCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCc---ceEEEEecCCCCEE
Q 018248 163 VEDY-GTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERA---EIYSLAFSSNAQWL 238 (359)
Q Consensus 163 ~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l 238 (359)
+++. +.+.+.++..... -.. +++|++.|+.+..++. |.++|..+.+.+..+....+.. .++.+.|. +|+..
T Consensus 120 V~D~~Tl~~~~ti~~~~e-GwG--Lt~Dg~~L~vSdGs~~-l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ly 194 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGE-GWG--LCYWNGKLVRSDGGTM-LTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIY 194 (268)
T ss_dssp EEETTTTEEEEEEECSSC-CCC--EEEETTEEEEECSSSE-EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEECCcCcEEEEEeCCCc-eeE--EecCCCEEEEECCCCE-EEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEE
Confidence 8665 4577777764322 233 3467888888777888 9999999999988887543322 45677877 78766
Q ss_pred EEEcCCCcEEEEEccCCC
Q 018248 239 AASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 239 ~~~~~dg~i~iw~~~~~~ 256 (359)
+..-.+..|.+.|.++++
T Consensus 195 anvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp EEETTCSEEEEECTTTCB
T ss_pred EEECCCCeEEEEeCCCCc
Confidence 666577889999999887
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.92 E-value=2.6e-06 Score=70.72 Aligned_cols=237 Identities=12% Similarity=0.076 Sum_probs=139.1
Q ss_pred eEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecc--------cC--------CCCceeEEEEeccCCEEEEEecC
Q 018248 9 IHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFD--------RN--------PRGGTQLVSMLFRSNIICLVNSG 71 (359)
Q Consensus 9 v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~--------~~--------h~~~v~~~~~~~~~~~~~~~~~~ 71 (359)
..+++|+++|+++.++. ++.|..|+.+..+........ .+ .......+++.++...+.++.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d-- 98 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD-- 98 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE--
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE--
Confidence 46788999999777777 889999987754332111100 00 012345566655334455554
Q ss_pred CCCCCeEEEEECCCccEEeeec--c---CcceeEEEEec-ceeEEEe--------------------cCeEEEEEcccce
Q 018248 72 PHQSNKVMIWDDHENRYLGELS--F---RSEVKNVRLRR-DRIVVVL--------------------NQKVYVYNFTDLK 125 (359)
Q Consensus 72 ~~~d~~i~iwd~~~~~~~~~~~--~---~~~v~~~~~~~-~~~~~~~--------------------d~~i~i~d~~~~~ 125 (359)
..+.|..+|..+++...... . ......+++.+ +|.+.+. ++.|..+|..+++
T Consensus 99 --~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 99 --CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp --TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred --CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 23558888876553221111 1 13467899999 8876662 1568888876665
Q ss_pred eeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCe---eeEEeecccccccEEEEccCCcEEEEEeC----
Q 018248 126 LVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK---KSKYITAHASRIASIAMTLDGRFVATASS---- 198 (359)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---- 198 (359)
........ .....++++++++.++++-. ..+.|.+++..+. ....+....+ ...+++.++|++.++...
T Consensus 177 ~~~~~~~~-~~p~gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 177 TTLLLKEL-HVPGGAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp EEEEEEEE-SCCCEEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred EEEeccCC-ccCcceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccc
Confidence 43332221 22345888998876555532 3567877665531 2222222223 678999999986666544
Q ss_pred ------CCCeEEEEEcCCCcEEEEeecCCC--CcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 199 ------KGTLIRVFNTMDGSLLQEMRRGAE--RAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 199 ------dg~~i~iwd~~~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
.+. |..+|. .++.+..+..... ...+..+++ .+++++++....+.|.++++....
T Consensus 253 ~~~~~~~~~-v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 253 NMHGRVDPK-GIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp STTSCEEEE-EEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC----
T ss_pred cccCCCccE-EEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccccc
Confidence 456 888885 5777777654211 234666766 466666666677889999987654
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.92 E-value=1.6e-06 Score=79.27 Aligned_cols=192 Identities=13% Similarity=0.097 Sum_probs=112.0
Q ss_pred CEEEEec-CCceEEEEcCCCcceeeeecccCCC------CceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEee
Q 018248 19 GCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPR------GGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGE 91 (359)
Q Consensus 19 ~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~ 91 (359)
..+++++ ++.|..+|.++++.+.......... ...........++.+++.+ .|+.|..+|..+|+.+..
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~----~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT----LDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC----TTSEEEEEETTTCCEEEE
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc----CCCEEEEEECCCCCEeee
Confidence 3455555 8899999999998887765420000 0000001112345555555 579999999999999887
Q ss_pred eccC-----cceeEEEEecceeEEE--e------cCeEEEEEcccceeeeeEeccC-CC---------------------
Q 018248 92 LSFR-----SEVKNVRLRRDRIVVV--L------NQKVYVYNFTDLKLVDQIETVV-NP--------------------- 136 (359)
Q Consensus 92 ~~~~-----~~v~~~~~~~~~~~~~--~------d~~i~i~d~~~~~~~~~~~~~~-~~--------------------- 136 (359)
+... ..+.+.-.-.++.+++ . ++.|+.+|.++++.+..+.... .+
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 7632 1122111112555555 2 5899999999999988876421 10
Q ss_pred ---------ceeeeeecCCCccEEEecCCCCe-------------------eEEEEe-cCCeeeEEeec--cc-------
Q 018248 137 ---------TGLCDVSQNAGPMVMACPGLLKG-------------------QVRVED-YGTKKSKYITA--HA------- 178 (359)
Q Consensus 137 ---------~~~~~~~~~~~~~~l~~~g~~d~-------------------~v~~~~-~~~~~~~~~~~--~~------- 178 (359)
....++.+..+.+++.+ .++ .|...+ .+++.+-.++. |.
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~---~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~ 299 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGT---GNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTAT 299 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEEC---CCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred eeeCCCCccccceEEcCCCCEEEEeC---CCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCC
Confidence 01235555555433332 333 255444 44555544432 22
Q ss_pred ccccEEEEccCCc---EEEEEeCCCCeEEEEEcCCCcEEEEee
Q 018248 179 SRIASIAMTLDGR---FVATASSKGTLIRVFNTMDGSLLQEMR 218 (359)
Q Consensus 179 ~~i~~~~~s~~~~---~l~~~~~dg~~i~iwd~~~~~~~~~~~ 218 (359)
.+.....+..+|+ .++.++.+|. ++++|..+|+.+...+
T Consensus 300 ~~~~~~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 300 QQITLAELNIDGKPRKVLMQAPKNGF-FYVLDRTNGKLISAEK 341 (668)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEE
T ss_pred CCcEEEEeccCCcEEEEEEEECCCCE-EEEEECCCCCEecccc
Confidence 2222223334675 6888999999 9999999999885544
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.91 E-value=7.8e-07 Score=69.86 Aligned_cols=182 Identities=6% Similarity=0.018 Sum_probs=119.2
Q ss_pred CCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeE--EEEecceeEEE--ecCeEEEEEcccc
Q 018248 49 PRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKN--VRLRRDRIVVV--LNQKVYVYNFTDL 124 (359)
Q Consensus 49 h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~--~d~~i~i~d~~~~ 124 (359)
|......-.+.++++.+..+++ .++.|+++|+++++.+..+ ....... +++..+..+++ .++.+.+||..+.
T Consensus 51 hd~~~ftqGL~~~~~~Ly~stG---~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 51 HATNAFTQGLVFHQGHFFESTG---HQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp CCTTCCEEEEEEETTEEEEEET---TTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTT
T ss_pred CCCccccceEEEECCEEEEEcC---CCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcC
Confidence 4444433334445665555554 4588999999999988887 5555544 56655555555 6999999999999
Q ss_pred eeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecC-CeeeEEeecc--cc---cccEEEEccCCcEEEEEeC
Q 018248 125 KLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-TKKSKYITAH--AS---RIASIAMTLDGRFVATASS 198 (359)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~~~~~~~~~--~~---~i~~~~~s~~~~~l~~~~~ 198 (359)
+.+.++..... -..++++++.++ ++ . .++.|.+.+.. .+.+..+... .. .++.+.|. +|+..+..-.
T Consensus 127 ~~~~ti~~~~e---GwGLt~Dg~~L~-vS-d-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~ 199 (268)
T 3nok_A 127 QRERTTRYSGE---GWGLCYWNGKLV-RS-D-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWH 199 (268)
T ss_dssp EEEEEEECSSC---CCCEEEETTEEE-EE-C-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred cEEEEEeCCCc---eeEEecCCCEEE-EE-C-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECC
Confidence 99999986433 245557776533 33 2 26678875544 4555555432 22 34567776 7765555545
Q ss_pred CCCeEEEEEcCCCcEEEEeecCC-----------CCcceEEEEecCCCCEEEEEc
Q 018248 199 KGTLIRVFNTMDGSLLQEMRRGA-----------ERAEIYSLAFSSNAQWLAASS 242 (359)
Q Consensus 199 dg~~i~iwd~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~l~~~~ 242 (359)
+.. |.+.|.++++.+..+.... ...-.+.|+++|+++.|+..+
T Consensus 200 s~~-I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 200 SSD-VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CSE-EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCe-EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 667 9999999999988876420 113568999999766554443
No 251
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.90 E-value=2e-05 Score=73.89 Aligned_cols=235 Identities=9% Similarity=0.081 Sum_probs=139.9
Q ss_pred eEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccE
Q 018248 9 IHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRY 88 (359)
Q Consensus 9 v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 88 (359)
|.++...++|.+.+...++.+..|+..+.+....... .+...+..+....++ .+.+++ .++.+..||..+++.
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~--~~~~~i~~i~~d~~g-~lwigt----~~~Gl~~~~~~~~~~ 247 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPI--LGTKQIQAILQQSPT-RIWVAT----EGAGLFLINPKTKEI 247 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC------CCCEEEEEEEETT-EEEEEE----BSSCEEEEETTTTEE
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCC--CCCCeeEEEEEcCCC-CEEEEE----CCCCeEEEeCCCCeE
Confidence 8888888888766644366789999876443211111 123445544443332 333333 235688999777654
Q ss_pred Eeeec--------cCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEec-------cCCCceeeeeecCCCccEEE
Q 018248 89 LGELS--------FRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIET-------VVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 89 ~~~~~--------~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~ 152 (359)
..... ....|.++...++|.+.+ .++.|.+||..+++....... ....+..+....++. +++.
T Consensus 248 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWig 326 (795)
T 4a2l_A 248 KNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLG 326 (795)
T ss_dssp EEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEE
T ss_pred EEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEE
Confidence 33221 135689999998888777 556899999876654332211 123344444444332 3333
Q ss_pred ecCCCCeeEEEEecCCeeeEEeec-------ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec------
Q 018248 153 CPGLLKGQVRVEDYGTKKSKYITA-------HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR------ 219 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~------ 219 (359)
+ .++-|..++........+.. ....|.++...++|.+ ..|+.++. |..||..+++...-...
T Consensus 327 t---~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~G-l~~~~~~~~~~~~~~~~~~~~~~ 401 (795)
T 4a2l_A 327 T---YFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGG-LNLYNPITQRFTSYTLQEDESAR 401 (795)
T ss_dssp E---SSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSC-EEEECTTTCCEEEECCC------
T ss_pred E---CCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCC-eEEEcCCCCcEEEEecCCCCccc
Confidence 2 45556666554444433321 2346889998888874 45777767 99999877654432211
Q ss_pred CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 220 GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 220 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
......|.++...++|+.|..|+.++-|..||.++++
T Consensus 402 ~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 402 GIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred CCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 0123579999998899855566776669999988765
No 252
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.89 E-value=1.3e-05 Score=72.03 Aligned_cols=196 Identities=10% Similarity=0.059 Sum_probs=111.8
Q ss_pred CCCEEEEec-CCceEEEEc-CCCcceeeeecccCCC--------CceeEEEEeccCCE----EEEEecCCCCCCeEEEEE
Q 018248 17 DHGCFATGT-ETGFRVYLS-DPYKPIMRRDFDRNPR--------GGTQLVSMLFRSNI----ICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 17 ~g~~l~~~~-d~~i~iw~~-~~~~~~~~~~~~~~h~--------~~v~~~~~~~~~~~----~~~~~~~~~~d~~i~iwd 82 (359)
++..+++.. ++.|.-+|. ++++.+.......... .....+.+.+.+.. +++.+ .|+.|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t----~dg~l~AlD 137 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ----LDGNVAALN 137 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC----TTSEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc----CCCEEEEEE
Confidence 344445555 688999999 8888887766530000 00111233223333 55554 579999999
Q ss_pred CCCccEEeeeccCc-----ceeEEEEecceeEEE-e-------cCeEEEEEcccceeeeeEeccCCCc------------
Q 018248 83 DHENRYLGELSFRS-----EVKNVRLRRDRIVVV-L-------NQKVYVYNFTDLKLVDQIETVVNPT------------ 137 (359)
Q Consensus 83 ~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~-~-------d~~i~i~d~~~~~~~~~~~~~~~~~------------ 137 (359)
..+|+.+....... .+.+--.-.++.+++ . ++.|+.+|.++++.+..+.......
T Consensus 138 a~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 138 AETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 99999988765222 222211112556665 2 6899999999999988876432210
Q ss_pred --------------------------eeeeeecCCCccEEEecCCC--------------CeeEEE-EecCCeeeEEeec
Q 018248 138 --------------------------GLCDVSQNAGPMVMACPGLL--------------KGQVRV-EDYGTKKSKYITA 176 (359)
Q Consensus 138 --------------------------~~~~~~~~~~~~~l~~~g~~--------------d~~v~~-~~~~~~~~~~~~~ 176 (359)
...++.+....+++.+ +.. .+.|.. +..+++.+-.++.
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~-g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~ 296 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT-GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQK 296 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC-CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEES
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC-CCCccccCcccCCCccccceEEEEeCCCCceeeEeec
Confidence 0123334444434333 321 124444 4445555544432
Q ss_pred --ccc-------cccEEEEc-cCC---cEEEEEeCCCCeEEEEEcCCCcEEEEee
Q 018248 177 --HAS-------RIASIAMT-LDG---RFVATASSKGTLIRVFNTMDGSLLQEMR 218 (359)
Q Consensus 177 --~~~-------~i~~~~~s-~~~---~~l~~~~~dg~~i~iwd~~~~~~~~~~~ 218 (359)
|.. ...-+... .+| +.++.++.+|. +.++|.++|+.+....
T Consensus 297 ~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 297 TPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGI-VYTLDRTDGALVSANK 350 (599)
T ss_dssp STTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSE-EEEEETTTCCEEEEEE
T ss_pred CCCccccccCCCccEEEeccccCCcEEEEEEEECCCcE-EEEEECCCCCEeeccc
Confidence 211 11112222 467 56778889999 9999999999987765
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.86 E-value=1.7e-06 Score=79.19 Aligned_cols=232 Identities=11% Similarity=0.067 Sum_probs=140.1
Q ss_pred CCEEEEec-CCceEEEEcCCCcceeeeecccCCC--CceeEEEEeccCCEEEEEecCCC--CCCeEEEEECCCccEEeee
Q 018248 18 HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPR--GGTQLVSMLFRSNIICLVNSGPH--QSNKVMIWDDHENRYLGEL 92 (359)
Q Consensus 18 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~~~~~~~~--~d~~i~iwd~~~~~~~~~~ 92 (359)
+..+++++ |+.|..+|.++++........ .+. ..+...-.. ..+.+++...+.. .++.|..+|..+|+.+..+
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTT-DPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECS-CTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccC-CCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 45677777 999999999999988776652 000 111110001 2344444332210 2589999999999998877
Q ss_pred cc-C-cc------------------------------eeEEEEecceeEEE---ecC-------------------eEEE
Q 018248 93 SF-R-SE------------------------------VKNVRLRRDRIVVV---LNQ-------------------KVYV 118 (359)
Q Consensus 93 ~~-~-~~------------------------------v~~~~~~~~~~~~~---~d~-------------------~i~i 118 (359)
.. . .+ ...+++.|+...++ .++ .|..
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 52 1 00 12367777544443 333 4999
Q ss_pred EEcccceeeeeEeccCCC---------ceeeeeecCCCcc-EEEecCCCCeeEEEEec-CCeeeEEeeccc---------
Q 018248 119 YNFTDLKLVDQIETVVNP---------TGLCDVSQNAGPM-VMACPGLLKGQVRVEDY-GTKKSKYITAHA--------- 178 (359)
Q Consensus 119 ~d~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~l~~~g~~d~~v~~~~~-~~~~~~~~~~~~--------- 178 (359)
+|..+++.+..++..... .....+..+++.. +++. ++.+|.+++.+. +++.+.......
T Consensus 275 lD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~-~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 275 IRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQ-APKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEE-CCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred EcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEE-ECCCCEEEEEECCCCCEecccccccccccccccc
Confidence 999999998888753221 1222233355422 2443 667999998554 455442221110
Q ss_pred ---c------------------------cccEEEEccCCcEEEEEe----------------------------------
Q 018248 179 ---S------------------------RIASIAMTLDGRFVATAS---------------------------------- 197 (359)
Q Consensus 179 ---~------------------------~i~~~~~s~~~~~l~~~~---------------------------------- 197 (359)
. .-..++++|+...++...
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~ 433 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA 433 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence 0 011267888766655421
Q ss_pred --CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 198 --SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 198 --~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
.+|. |..||+.+++.+-+...+ .+.....+...+.+++.++.|+.++.||.++++
T Consensus 434 ~~~~g~-l~A~D~~tG~~~W~~~~~---~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 434 AVVSGA-LLAWDPVKQKAAWKVPYP---THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp GGCEEE-EEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CCccce-EEEEeCCCCcEEEEccCC---CCCcCceeEeCCCEEEEECCcccchhhhhhcCh
Confidence 2377 999999999988777642 233333444567888899999999999999987
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.84 E-value=1.5e-05 Score=65.51 Aligned_cols=225 Identities=9% Similarity=0.037 Sum_probs=130.6
Q ss_pred CceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 7 ITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
.....++|+++|+++++.. ++.|..|+.+.. ....... ......+++.++++. +++..+. ....|..++..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~----~~~p~gia~~~dG~l-~vad~~~-~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV----EGKVSGLAFTSNGDL-VATGWNA-DSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC----SSEEEEEEECTTSCE-EEEEECT-TSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC----CCCceeEEEcCCCcE-EEEeccC-CcceEEEEcCCC
Confidence 4567899999999777776 788988887753 2222222 345667778777774 3333221 113577778777
Q ss_pred ccEEeeec--cCcceeEEEEecceeEEE---ecCeEEEEEccccee-eeeEec-------cCCCceeeeeecCCCccEEE
Q 018248 86 NRYLGELS--FRSEVKNVRLRRDRIVVV---LNQKVYVYNFTDLKL-VDQIET-------VVNPTGLCDVSQNAGPMVMA 152 (359)
Q Consensus 86 ~~~~~~~~--~~~~v~~~~~~~~~~~~~---~d~~i~i~d~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~l~ 152 (359)
++...... .......++..+++..++ .++.|+++|...++. +..... .........++++++.++++
T Consensus 105 g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~ 184 (306)
T 2p4o_A 105 GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVS 184 (306)
T ss_dssp SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEE
T ss_pred CeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEE
Confidence 76543332 122234455555555454 468899999765421 111110 01101112237777665555
Q ss_pred ecCCCCeeEEEEecCC--e--eeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEE--EeecCCCCcce
Q 018248 153 CPGLLKGQVRVEDYGT--K--KSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQ--EMRRGAERAEI 226 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~--~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~--~~~~~~~~~~i 226 (359)
- ...+.|..++.+. . ....+.. ......++++++|++.++....+. |.++|.. ++... .+.. .....
T Consensus 185 d--~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~-V~~~~~~-G~~~~~~~~~~--~~~~p 257 (306)
T 2p4o_A 185 N--TEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNS-VVRIAPD-RSTTIIAQAEQ--GVIGS 257 (306)
T ss_dssp E--TTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCC-EEEECTT-CCEEEEECGGG--TCTTE
T ss_pred e--CCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCe-EEEECCC-CCEEEEeeccc--ccCCc
Confidence 4 3466787766543 1 1122211 235678999999987666666777 9999964 66533 2332 22468
Q ss_pred EEEEec---CCCCEEEEEcCCC
Q 018248 227 YSLAFS---SNAQWLAASSDKG 245 (359)
Q Consensus 227 ~~~~~s---~~~~~l~~~~~dg 245 (359)
++++|. |+++.|+.++..+
T Consensus 258 ~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 258 TAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEEEECCSTTTTTEEEEEECTT
T ss_pred eEEEEecccCCCCEEEEECCCC
Confidence 999998 8887776665443
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.82 E-value=5.3e-06 Score=64.62 Aligned_cols=180 Identities=9% Similarity=0.048 Sum_probs=115.4
Q ss_pred CceEEEEEccCCCEEEEec-C--CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEEC
Q 018248 7 ITIHHLALNQDHGCFATGT-E--TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDD 83 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~-d--~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~ 83 (359)
.-...+.|++ +.++.+.+ + +.|+.+|+++++......+. .......+...++.+..+.. .++.+.+||.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~----~~~fgeGi~~~~~~ly~ltw---~~~~v~v~D~ 92 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP----PPYFGAGIVAWRDRLIQLTW---RNHEGFVYDL 92 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC----TTCCEEEEEEETTEEEEEES---SSSEEEEEET
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC----CCcceeEEEEeCCEEEEEEe---eCCEEEEEEC
Confidence 3466889986 45445544 4 47999999998887666663 33333444455666666654 4699999999
Q ss_pred CCccEEeeeccCcceeEEEEecceeEE-E--ecCeEEEEEcccceeeeeEeccCC-----CceeeeeecCCCccEEEecC
Q 018248 84 HENRYLGELSFRSEVKNVRLRRDRIVV-V--LNQKVYVYNFTDLKLVDQIETVVN-----PTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 84 ~~~~~~~~~~~~~~v~~~~~~~~~~~~-~--~d~~i~i~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~g 155 (359)
.+.+.+.++.....-..++. ++..+ + .++.|.++|..+.+.+..+..... ..+.+.+. +..++... -
T Consensus 93 ~tl~~~~ti~~~~~Gwglt~--dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanv-w 167 (243)
T 3mbr_X 93 ATLTPRARFRYPGEGWALTS--DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANV-W 167 (243)
T ss_dssp TTTEEEEEEECSSCCCEEEE--CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEE-T
T ss_pred CcCcEEEEEeCCCCceEEee--CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEE-C
Confidence 99999999986554455554 44333 3 677899999999988888865332 12223332 33344333 3
Q ss_pred CCCeeEEEEecCCeeeEEeecc-------------cccccEEEEccCCcEEEEEeCC
Q 018248 156 LLKGQVRVEDYGTKKSKYITAH-------------ASRIASIAMTLDGRFVATASSK 199 (359)
Q Consensus 156 ~~d~~v~~~~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~l~~~~~d 199 (359)
..+..++|+..+++.+..+... ..-.+.|+++|+++.|.+.+..
T Consensus 168 ~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 3344444466677766665421 1356889999987766666544
No 256
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.81 E-value=2.9e-05 Score=66.11 Aligned_cols=234 Identities=7% Similarity=0.001 Sum_probs=141.8
Q ss_pred EEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEE
Q 018248 10 HHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYL 89 (359)
Q Consensus 10 ~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~ 89 (359)
.|.+..+ ..+|+.+....|+.++++......... .......+++.+..+.+.++.. ..+.|..+++..+...
T Consensus 80 ~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~~~~~----~~~~~~gl~~d~~~~~ly~~D~---~~~~I~r~~~~g~~~~ 151 (386)
T 3v65_B 80 SCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDV---TLDRILRANLNGSNVE 151 (386)
T ss_dssp CEEECSS-CCEEEEECBSCEEEECTTSCCCEEEEC----SCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCCEE
T ss_pred eECCccc-cceeEeecCccceeeccCCCcEEEEec----CCCccEEEEEecCCCeEEEEeC---CCCcEEEEecCCCCcE
Confidence 3444444 345666666778888887644332222 1344566777777777776654 3589999998766544
Q ss_pred eeec-cCcceeEEEEecc-eeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEE
Q 018248 90 GELS-FRSEVKNVRLRRD-RIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVE 164 (359)
Q Consensus 90 ~~~~-~~~~v~~~~~~~~-~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~ 164 (359)
..+. .......+++.+. +.+.+ ..+.|.+.++........+.........+++.|.+..++++-.+ ..+.|...
T Consensus 152 ~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~-~~~~I~r~ 230 (386)
T 3v65_B 152 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG-NTPRIEAS 230 (386)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS-SSCEEEEE
T ss_pred EEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC-CCCEEEEE
Confidence 4333 2345677888864 44333 55788888875433222232222344668888877765555422 23677777
Q ss_pred ecCCeeeEEee-cccccccEEEEccCCcEEEEEeC-CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEc
Q 018248 165 DYGTKKSKYIT-AHASRIASIAMTLDGRFVATASS-KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASS 242 (359)
Q Consensus 165 ~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 242 (359)
+.++.....+. ..-...+.|+++|++..|..+.. .+. |..+|+........+.. .......+++ ..+.++++-.
T Consensus 231 ~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~--~~~~P~giav-~~~~ly~td~ 306 (386)
T 3v65_B 231 SMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGSHRKAVISQ--GLPHPFAITV-FEDSLYWTDW 306 (386)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE-EEEECTTSCSCEEEECS--SCSSEEEEEE-ETTEEEEEET
T ss_pred eCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE-EEEEeCCCCeeEEEEEC--CCCCceEEEE-ECCEEEEeeC
Confidence 77776555443 23345689999987776666654 455 99998754333323332 2345678888 4555666666
Q ss_pred CCCcEEEEEccCCC
Q 018248 243 DKGTVHVFGLKVDS 256 (359)
Q Consensus 243 ~dg~i~iw~~~~~~ 256 (359)
..+.|..++..+++
T Consensus 307 ~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 307 HTKSINSANKFTGK 320 (386)
T ss_dssp TTTEEEEEETTTCC
T ss_pred CCCeEEEEECCCCc
Confidence 77888888855554
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.78 E-value=1.6e-06 Score=77.73 Aligned_cols=232 Identities=8% Similarity=-0.011 Sum_probs=136.8
Q ss_pred CCEEEEec-CCceEEEEcCCCcceeeeecccCCC--CceeEEEEeccCCEEEEEecCCC--CCCeEEEEECCCccEEeee
Q 018248 18 HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPR--GGTQLVSMLFRSNIICLVNSGPH--QSNKVMIWDDHENRYLGEL 92 (359)
Q Consensus 18 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~~~~~~~~--~d~~i~iwd~~~~~~~~~~ 92 (359)
+..+++++ |+.+..+|..+++......+. .+. ..+...-.. .++.+++.+.+.. .++.|..+|..+|+.+.++
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVC-DPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCC-CCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 45666676 999999999999888776653 110 011110011 2344444432100 1689999999999998877
Q ss_pred ccCcce---------------------------------------eEEEEecce-eEEE--ec----------------C
Q 018248 93 SFRSEV---------------------------------------KNVRLRRDR-IVVV--LN----------------Q 114 (359)
Q Consensus 93 ~~~~~v---------------------------------------~~~~~~~~~-~~~~--~d----------------~ 114 (359)
...... ..+++.++. .+++ .+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 622111 124555543 3333 21 2
Q ss_pred eEEEEEcccceeeeeEeccCCC------cee---eeeecCCCc-cEEEecCCCCeeEEEEe-cCCeeeEEeeccc-----
Q 018248 115 KVYVYNFTDLKLVDQIETVVNP------TGL---CDVSQNAGP-MVMACPGLLKGQVRVED-YGTKKSKYITAHA----- 178 (359)
Q Consensus 115 ~i~i~d~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~-~~l~~~g~~d~~v~~~~-~~~~~~~~~~~~~----- 178 (359)
.|..+|..+++.+..++..... ... .....+++. .+++. +..+|.+++.+ .+++.+.......
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~-~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSH-IDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEE-ECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEE-eCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 6999999999998887653211 111 122234431 12333 55688888855 4555544332111
Q ss_pred --------ccc--------------------------cEEEEccCCcEEEEEe---------------------------
Q 018248 179 --------SRI--------------------------ASIAMTLDGRFVATAS--------------------------- 197 (359)
Q Consensus 179 --------~~i--------------------------~~~~~s~~~~~l~~~~--------------------------- 197 (359)
.++ ..++++|+..++++.+
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 011 2467888877766653
Q ss_pred ----------CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 198 ----------SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 198 ----------~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
.+|. |..||..+++.+-++... ..+....+...+..++.++.||.|+.||.++++
T Consensus 432 ~~~~~~~~~~~~g~-l~a~D~~tG~~~W~~~~~---~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQ-IRAFDLTTGKAKWTKWEK---FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp EECTTSTTSCCCEE-EEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccCccccCCCCCCe-EEEEECCCCCEEEEecCC---CCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 2467 999999999988877642 222222233346677779999999999999987
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.78 E-value=1.1e-05 Score=72.39 Aligned_cols=238 Identities=7% Similarity=0.026 Sum_probs=137.0
Q ss_pred EEEccCCCE----EEEec-CCceEEEEcCCCcceeeeecccCCC--CceeEEEEeccCCEEEEEecCCC--CCCeEEEEE
Q 018248 12 LALNQDHGC----FATGT-ETGFRVYLSDPYKPIMRRDFDRNPR--GGTQLVSMLFRSNIICLVNSGPH--QSNKVMIWD 82 (359)
Q Consensus 12 ~~~s~~g~~----l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~~~~~~~~--~d~~i~iwd 82 (359)
++++|.+.. +++++ |+.+..+|.++++.+....+. .+. ..+...-.. ..+.+++.+.+.. .++.|..+|
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~-~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENS-DIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCC-CCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEE
Confidence 445444434 77777 999999999999888776653 110 011110011 1334443332100 268999999
Q ss_pred CCCccEEeeeccCcce---------------------------------------eEEEEecceeEEE---ec-------
Q 018248 83 DHENRYLGELSFRSEV---------------------------------------KNVRLRRDRIVVV---LN------- 113 (359)
Q Consensus 83 ~~~~~~~~~~~~~~~v---------------------------------------~~~~~~~~~~~~~---~d------- 113 (359)
.++|+.+..+....+. ..+++.+....+. .+
T Consensus 189 ~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~ 268 (599)
T 1w6s_A 189 VKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNET 268 (599)
T ss_dssp TTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGG
T ss_pred CCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCc
Confidence 9999998877622211 1234555443333 22
Q ss_pred ---------CeEEEEEcccceeeeeEeccCCCc---------eeeeee-cCCCc-cEEEecCCCCeeEEEEe-cCCeeeE
Q 018248 114 ---------QKVYVYNFTDLKLVDQIETVVNPT---------GLCDVS-QNAGP-MVMACPGLLKGQVRVED-YGTKKSK 172 (359)
Q Consensus 114 ---------~~i~i~d~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~-~~l~~~g~~d~~v~~~~-~~~~~~~ 172 (359)
+.|..+|..+++.+..++...... ...... .+++. .+++. ++.+|.+++.+ .+++.+.
T Consensus 269 ~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~-~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 269 MRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTH-PDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp GSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEE-ECTTSEEEEEETTTCCEEE
T ss_pred ccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEE-ECCCcEEEEEECCCCCEee
Confidence 389999999999988887643321 111221 34432 22333 55788888854 4555544
Q ss_pred Eeeccc-------------cc--------------------------ccEEEEccCCcEEEEEe----------------
Q 018248 173 YITAHA-------------SR--------------------------IASIAMTLDGRFVATAS---------------- 197 (359)
Q Consensus 173 ~~~~~~-------------~~--------------------------i~~~~~s~~~~~l~~~~---------------- 197 (359)
...... .+ -..++++|+..++++..
T Consensus 348 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~ 427 (599)
T 1w6s_A 348 ANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKA 427 (599)
T ss_dssp EEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCT
T ss_pred cccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccC
Confidence 332110 00 12456777766554421
Q ss_pred -----------------------CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccC
Q 018248 198 -----------------------SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 198 -----------------------~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 254 (359)
..|. |..||+.+++.+-+.+.. .+...-.+...+.+++.++.|+.++.||.++
T Consensus 428 g~~~~g~~~~~~~~p~~~~~~~~~~G~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagg~vf~gt~dg~l~A~D~~t 503 (599)
T 1w6s_A 428 GQFFVGATLNMYPGPKGDRQNYEGLGQ-IKAYNAITGDYKWEKMER---FAVWGGTMATAGDLVFYGTLDGYLKARDSDT 503 (599)
T ss_dssp TSCCCCEEEEEEECTTSBTTTTBCCEE-EEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred CcceecccceeccCCcCCcccCCCcCe-EEEEECCCCCEEeEecCC---CCccCcceEecCCEEEEECCCCeEEEEECCC
Confidence 3467 899999999988777532 1221111222566777899999999999999
Q ss_pred CC
Q 018248 255 DS 256 (359)
Q Consensus 255 ~~ 256 (359)
++
T Consensus 504 G~ 505 (599)
T 1w6s_A 504 GD 505 (599)
T ss_dssp CC
T ss_pred CC
Confidence 87
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.77 E-value=5.1e-05 Score=63.58 Aligned_cols=237 Identities=7% Similarity=-0.013 Sum_probs=143.1
Q ss_pred CceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCc
Q 018248 7 ITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHEN 86 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 86 (359)
+...|.+..+ ..+|+.+....|+..+++..... ..+. .......+++.+..+.+.++.. ..+.|..+++..+
T Consensus 34 d~~~C~~~~~-~~~ll~~~~~~I~~i~~~g~~~~--~~~~--~~~~~~~l~~d~~~~~ly~~D~---~~~~I~r~~~~g~ 105 (349)
T 3v64_C 34 DRRSCKALGP-EPVLLFANRIDIRQVLPHRSEYT--LLLN--NLENAIALDFHHRRELVFWSDV---TLDRILRANLNGS 105 (349)
T ss_dssp TSSCEEESSS-CCEEEEECBSCEEEECTTSCCEE--EEEC--SCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC
T ss_pred CCCccccccc-CceeEeecccceEEEeCCCCeeE--Eeec--CCCceEEEEEeccccEEEEEec---cCCceEEEecCCC
Confidence 3445666556 34566666666888887754332 2221 1234566777777777777654 3588999998766
Q ss_pred cEEeeec-cCcceeEEEEecc-eeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeE
Q 018248 87 RYLGELS-FRSEVKNVRLRRD-RIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQV 161 (359)
Q Consensus 87 ~~~~~~~-~~~~v~~~~~~~~-~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v 161 (359)
.....+. .......+++.+. +.+.+ ..+.|.+.++........+.........+++.|.+..++++-.+ ..+.|
T Consensus 106 ~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~-~~~~I 184 (349)
T 3v64_C 106 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG-NTPRI 184 (349)
T ss_dssp SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECS-SSCEE
T ss_pred CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccC-CCCEE
Confidence 5433333 2345678899874 44433 56789999985433222222222344678888877665555422 23778
Q ss_pred EEEecCCeeeEEeec-ccccccEEEEccCCcEEEEEeC-CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEE
Q 018248 162 RVEDYGTKKSKYITA-HASRIASIAMTLDGRFVATASS-KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLA 239 (359)
Q Consensus 162 ~~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 239 (359)
...+.++.....+.. .-...+.++++|++..|..+.. .+. |..+|+........+.. .......+++ .++.+++
T Consensus 185 ~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~-I~~~~~dG~~~~~~~~~--~~~~P~giav-~~~~ly~ 260 (349)
T 3v64_C 185 EASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGSHRKAVISQ--GLPHPFAITV-FEDSLYW 260 (349)
T ss_dssp EEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEECS--SCSSEEEEEE-ETTEEEE
T ss_pred EEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE-EEEEeCCCCceEEEEeC--CCCCceEEEE-ECCEEEE
Confidence 877777765555432 3345689999987776666654 455 99999764333322322 2345678888 3555666
Q ss_pred EEcCCCcEEEEEccCCC
Q 018248 240 ASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 240 ~~~~dg~i~iw~~~~~~ 256 (359)
+-...+.|..++..+++
T Consensus 261 td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 261 TDWHTKSINSANKFTGK 277 (349)
T ss_dssp EETTTTEEEEEETTTCC
T ss_pred ecCCCCeEEEEEccCCC
Confidence 66667778888755554
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.76 E-value=1.9e-05 Score=65.46 Aligned_cols=180 Identities=10% Similarity=0.040 Sum_probs=104.5
Q ss_pred eEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec--------------------cCcceeEEEEec-ceeEEE-
Q 018248 54 QLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS--------------------FRSEVKNVRLRR-DRIVVV- 111 (359)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~--------------------~~~~v~~~~~~~-~~~~~~- 111 (359)
..+++.++++.+.+.. .++.|..|+..+++...... ....+..+++.+ ++.+++
T Consensus 22 ~~i~~d~~g~~l~v~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSV----QDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CCEECCTTCSSEEEEC----TTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred eEEEEcCCCCEEEEEc----CCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 4455666655444443 46889999876654332110 113578899997 776665
Q ss_pred -ecCeEEEEEcccceeeeeEec-----cCCCceeeeeec-CCCccEEEecC---------------CCCeeEEEEecCCe
Q 018248 112 -LNQKVYVYNFTDLKLVDQIET-----VVNPTGLCDVSQ-NAGPMVMACPG---------------LLKGQVRVEDYGTK 169 (359)
Q Consensus 112 -~d~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~l~~~g---------------~~d~~v~~~~~~~~ 169 (359)
..+.|..+|..+++. ..+.. .......+++.+ ++ .++++..+ ..++.|..++....
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 455688888765532 22211 112234567777 55 34444322 12366777776544
Q ss_pred eeEEeecccccccEEEEccCCcEEEEE-eCCCCeEEEEEcCCCc--EEEEeecCCCCcceEEEEecCCCCEEEEEcC
Q 018248 170 KSKYITAHASRIASIAMTLDGRFVATA-SSKGTLIRVFNTMDGS--LLQEMRRGAERAEIYSLAFSSNAQWLAASSD 243 (359)
Q Consensus 170 ~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~~i~iwd~~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 243 (359)
....+...-.....++++|+++.|+.+ ...+. |.+|++.... ....+.. ..+ ...+++.++|++.++...
T Consensus 176 ~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~-I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 176 ETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQ-IVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EEEEEEEEESCCCEEEECTTSSEEEEEEGGGTE-EEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEEEE
T ss_pred EEEEeccCCccCcceEECCCCCEEEEEeCCCCe-EEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEecC
Confidence 444333333456789999999876666 45567 9999986421 1222221 123 788999999987766544
No 261
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.71 E-value=7.5e-05 Score=67.04 Aligned_cols=195 Identities=9% Similarity=0.071 Sum_probs=110.2
Q ss_pred CCCEEEEecCCceEEEEcCCCcceeeeecccCCCCc------eeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEe
Q 018248 17 DHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGG------TQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLG 90 (359)
Q Consensus 17 ~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~------v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~ 90 (359)
++..++++.++.|.-+|.++++.+............ ...+. ..++.+++.+ .++.|.-+|..+|+.+.
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a--~~~~~v~~~t----~dg~l~AlD~~TG~~~W 141 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAA--IYGDKVFFGT----LDASVVALNKNTGKVVW 141 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCE--EETTEEEEEE----TTTEEEEEESSSCCEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccE--EECCEEEEEe----CCCEEEEEECCCCCEEe
Confidence 444444444455899999999888777653110000 01111 2345566655 57999999999999988
Q ss_pred eeccCc-----cee-EEEEecc---e--eEEE-e-------cCeEEEEEcccceeeeeEeccCCCc--------------
Q 018248 91 ELSFRS-----EVK-NVRLRRD---R--IVVV-L-------NQKVYVYNFTDLKLVDQIETVVNPT-------------- 137 (359)
Q Consensus 91 ~~~~~~-----~v~-~~~~~~~---~--~~~~-~-------d~~i~i~d~~~~~~~~~~~~~~~~~-------------- 137 (359)
...... .+. ......+ + .+++ . ++.|+.+|..+++.+.........+
T Consensus 142 ~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~ 221 (582)
T 1flg_A 142 KKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDV 221 (582)
T ss_dssp EEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCT
T ss_pred eecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccc
Confidence 776221 121 1112222 2 3444 2 6899999999999887654321000
Q ss_pred ---------------------------eeeeeecCCCccEEEecCC-----------C-------C----eeEEEEec-C
Q 018248 138 ---------------------------GLCDVSQNAGPMVMACPGL-----------L-------K----GQVRVEDY-G 167 (359)
Q Consensus 138 ---------------------------~~~~~~~~~~~~~l~~~g~-----------~-------d----~~v~~~~~-~ 167 (359)
...++.+....+++.+ +. . | +.|..++. +
T Consensus 222 g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~-gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~T 300 (582)
T 1flg_A 222 KAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGA-GNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSS 300 (582)
T ss_dssp TCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEE-CCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTT
T ss_pred ccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeC-CCCCcccCcccccCCCcccccCCcccceEEEEeCCC
Confidence 1133444445444444 21 0 1 45555554 4
Q ss_pred CeeeEEeec--ccc----cccE-EEEc---cCCc---EEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 168 TKKSKYITA--HAS----RIAS-IAMT---LDGR---FVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 168 ~~~~~~~~~--~~~----~i~~-~~~s---~~~~---~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
++.+-.++. |.. .+.. +.+. .+|+ .++.++.+|. ++++|..+|+.+..+..
T Consensus 301 G~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 301 GEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGF-FYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp CCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSE-EEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCce-EEEEECCCCCEeccccc
Confidence 555544432 221 1111 2222 4674 7888999999 99999999999877654
No 262
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.70 E-value=7.9e-05 Score=61.52 Aligned_cols=226 Identities=11% Similarity=-0.030 Sum_probs=137.6
Q ss_pred EEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC----ccEEeeec-c
Q 018248 20 CFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE----NRYLGELS-F 94 (359)
Q Consensus 20 ~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~----~~~~~~~~-~ 94 (359)
+|+.+....|+..++++.+...... .......+++.+..+.+.++.. ..+.|..+++.. ......+. .
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~----~~~~p~g~~~d~~~~~ly~~D~---~~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEET---TTTEEEEEEC--------CEEEECSS
T ss_pred EEEEECCCeEEEEECCCcceEehhc----CCCceEEEEEEeCCCEEEEEEC---CCCcEEEEECCCCCCCcccEEEEeCC
Confidence 5666777789999998755432221 1345566777777777777664 358999999775 22222222 2
Q ss_pred CcceeEEEEec-ceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCee
Q 018248 95 RSEVKNVRLRR-DRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKK 170 (359)
Q Consensus 95 ~~~v~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~ 170 (359)
-.....+++.+ .+.+.+ ..+.|.++++........+.........+++.|.+..++++-.+ ..+.|...+.++..
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~-~~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVD 154 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCC
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC-CCCeEEEEcCCCCC
Confidence 24567889886 344433 56799999985443322333233345678888877765555422 23677777777765
Q ss_pred eEEee-cccccccEEEEccCCcEEEEEeC-CCCeEEEEEcCCCcEEEEee-cCCCCcceEEEEecCCCCEEEEEcCCCcE
Q 018248 171 SKYIT-AHASRIASIAMTLDGRFVATASS-KGTLIRVFNTMDGSLLQEMR-RGAERAEIYSLAFSSNAQWLAASSDKGTV 247 (359)
Q Consensus 171 ~~~~~-~~~~~i~~~~~s~~~~~l~~~~~-dg~~i~iwd~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 247 (359)
.+.+. ..-...+.++++|++..|..+.. .+. |..+|+.... ...+. ..........+++. .+.++++-...+.|
T Consensus 155 ~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~-I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V 231 (316)
T 1ijq_A 155 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 231 (316)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred eEEEEECCCCCceEEEEeccCCEEEEEECCCCe-EEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeE
Confidence 55443 23346789999998777766654 456 9999986433 23332 11122356788885 45666666677889
Q ss_pred EEEEccCCC
Q 018248 248 HVFGLKVDS 256 (359)
Q Consensus 248 ~iw~~~~~~ 256 (359)
..++..+++
T Consensus 232 ~~~~~~~g~ 240 (316)
T 1ijq_A 232 FSANRLTGS 240 (316)
T ss_dssp EEEETTTCC
T ss_pred EEEeCCCCc
Confidence 888876665
No 263
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.69 E-value=0.00011 Score=62.82 Aligned_cols=228 Identities=11% Similarity=-0.036 Sum_probs=139.5
Q ss_pred CEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCc----cEEeeec-
Q 018248 19 GCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHEN----RYLGELS- 93 (359)
Q Consensus 19 ~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~----~~~~~~~- 93 (359)
.+|+.+....|+..+++......... ....+..+++.+..+.+.++.. ..+.|..+++... .....+.
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~----~~~~~~~l~~d~~~~~lywsD~---~~~~I~~~~~~g~~~~~~~~~~~~~ 156 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISR 156 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEEC----SCSCEEEEEEETTTTEEEEEET---TTTEEEEEEC------CCCEEEECS
T ss_pred ceeEEeccceeEEEccCCcceeEecc----ccCcceEEeeeeccCceEEEec---CCCeEEEEEcccCCCCCcceEEEeC
Confidence 35666667788888888654432221 2456677788877777777764 3588998987652 2222222
Q ss_pred cCcceeEEEEec-ceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCe
Q 018248 94 FRSEVKNVRLRR-DRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK 169 (359)
Q Consensus 94 ~~~~v~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~ 169 (359)
.......+++.+ .+.+.+ ..+.|.+.++........+.........+++.|.+..++++-.+ ..+.|...+.++.
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~-~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGV 235 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS-SSCCEEEEETTSC
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC-CCCEEEEEeCCCC
Confidence 335677888887 444443 56789999986544433333333345678888877665554422 2467777777776
Q ss_pred eeEEee-cccccccEEEEccCCcEEEEEeC-CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcE
Q 018248 170 KSKYIT-AHASRIASIAMTLDGRFVATASS-KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTV 247 (359)
Q Consensus 170 ~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 247 (359)
....+. ..-...+.|+++|++..|+.+.. .+. |..+|+....................+++. .+.++++-...+.|
T Consensus 236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V 313 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 313 (400)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSE
T ss_pred ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE-EEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeE
Confidence 555543 23356789999988877776654 455 999997544333222221122355677773 34556666677788
Q ss_pred EEEEccCCC
Q 018248 248 HVFGLKVDS 256 (359)
Q Consensus 248 ~iw~~~~~~ 256 (359)
..++..+++
T Consensus 314 ~~~~~~~G~ 322 (400)
T 3p5b_L 314 FSANRLTGS 322 (400)
T ss_dssp EEEESSSCC
T ss_pred EEEEcCCCC
Confidence 888876665
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.66 E-value=0.00013 Score=68.35 Aligned_cols=237 Identities=9% Similarity=0.039 Sum_probs=134.0
Q ss_pred CCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeee--------cc---cCCCCceeEEEEeccCCEEEEEecCCCC
Q 018248 6 PITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRD--------FD---RNPRGGTQLVSMLFRSNIICLVNSGPHQ 74 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~--------~~---~~h~~~v~~~~~~~~~~~~~~~~~~~~~ 74 (359)
...|.++...++|.+.+....+.|.+++..+........ .. .-....|..+.. +.+..+.++. .
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~--D~~g~lWigt---~ 331 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQ--DSFNNIWIGT---W 331 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEE--CSSCCEEEEE---B
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEE--eCCCCEEEEe---c
Confidence 467999999888875554435789999987643221111 00 001334544443 4443344443 3
Q ss_pred CCeEEEEECCCccEEeee-------c---cCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeE---eccCCCcee
Q 018248 75 SNKVMIWDDHENRYLGEL-------S---FRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQI---ETVVNPTGL 139 (359)
Q Consensus 75 d~~i~iwd~~~~~~~~~~-------~---~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~---~~~~~~~~~ 139 (359)
++-|..++..++...... . ....|.++...+++.+.+ .++.|..||..+++..... ......+.
T Consensus 332 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~- 410 (781)
T 3v9f_A 332 GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVL- 410 (781)
T ss_dssp SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEE-
T ss_pred CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceE-
Confidence 577888887654432211 1 235688999888887666 4678999998654432211 11123333
Q ss_pred eeeecCCCccEEEecCCCCeeEEEEecCCeeeEEeec---ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEE
Q 018248 140 CDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITA---HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQE 216 (359)
Q Consensus 140 ~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~ 216 (359)
++..+.+..+.+ |..++-+..++........+.. ....|.++...++|.+. .|+. +. |..||..+++....
T Consensus 411 -~i~~d~~g~lWi--gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lw-igt~-~G-l~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 411 -CSLKDSEGNLWF--GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIW-IGTH-AG-VFVIDLASKKVIHH 484 (781)
T ss_dssp -EEEECTTSCEEE--EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEE-EEET-TE-EEEEESSSSSCCEE
T ss_pred -EEEECCCCCEEE--EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEE-EEEC-Cc-eEEEeCCCCeEEec
Confidence 333443333333 2244556666665544544432 34578889888888754 4445 45 89999877654332
Q ss_pred eecC---CCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 018248 217 MRRG---AERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 217 ~~~~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 255 (359)
.... .....|.++...++|++.+.....| |..|+.+++
T Consensus 485 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~ 525 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQ 525 (781)
T ss_dssp ECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCC
T ss_pred ccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCC
Confidence 2211 0135789999999998766544355 777877654
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.65 E-value=0.00031 Score=65.89 Aligned_cols=235 Identities=9% Similarity=0.060 Sum_probs=138.3
Q ss_pred CCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecc-----cCCCCceeEEEEeccCCEEEEEecCCCCCCeEEE
Q 018248 6 PITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFD-----RNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMI 80 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~i 80 (359)
...|.++...++|.+.+...++.|..|+..+........-. .-....|..+....+++.+.+.+ .++-|..
T Consensus 356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt----~~~Gl~~ 431 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT----HAGGLSI 431 (795)
T ss_dssp CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE----TTTEEEE
T ss_pred CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe----CcCceeE
Confidence 45699999999987665444778999998764332111000 00134455555544444255555 4577999
Q ss_pred EECCCccEEeeec-----cCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEec------cCCCceeeeeecCCCc
Q 018248 81 WDDHENRYLGELS-----FRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIET------VVNPTGLCDVSQNAGP 148 (359)
Q Consensus 81 wd~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 148 (359)
+|..+++...... ....|.++...+++.+.+ ..+.+.+||..+++....... ....+..+....++.
T Consensus 432 ~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~- 510 (795)
T 4a2l_A 432 LHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKR- 510 (795)
T ss_dssp EETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCC-
T ss_pred EeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCC-
Confidence 9988776443221 235688999888887766 557799999876654322211 123344444443332
Q ss_pred cEEEecCCCCeeEEEEecCCeeeEEee-------cccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec--
Q 018248 149 MVMACPGLLKGQVRVEDYGTKKSKYIT-------AHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR-- 219 (359)
Q Consensus 149 ~~l~~~g~~d~~v~~~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~-- 219 (359)
+++++ ..| +..++...... .+. .....|.++...++|.+.+.. .. . |..||..+++.. .+..
T Consensus 511 lWigt---~~G-l~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-G-l~~~d~~~~~~~-~~~~~~ 581 (795)
T 4a2l_A 511 LWIGG---EEG-LSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-G-FYCFNEKDKQIK-RYNTTN 581 (795)
T ss_dssp EEEEE---SSC-EEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-C-EEEEETTTTEEE-EECGGG
T ss_pred EEEEe---CCc-eEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-C-ceeECCCCCcEE-EeCCCC
Confidence 33333 345 44444333322 222 134568899998999865443 44 4 899998766543 3321
Q ss_pred CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 220 GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 220 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
+.....|.++...++|++.+++ ..| |..|+.++..
T Consensus 582 gl~~~~i~~i~~d~~g~lWi~t-~~G-l~~~~~~~~~ 616 (795)
T 4a2l_A 582 GLPNNVVYGILEDSFGRLWLST-NRG-ISCFNPETEK 616 (795)
T ss_dssp TCSCSCEEEEEECTTSCEEEEE-TTE-EEEEETTTTE
T ss_pred CCchhheEEEEECCCCCEEEEc-CCc-eEEEcCCCCc
Confidence 2223468999999999877655 444 7788876543
No 266
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.65 E-value=1.4e-05 Score=73.18 Aligned_cols=239 Identities=9% Similarity=-0.008 Sum_probs=123.1
Q ss_pred EEEEcc-CCCEEEEec-CC-----------ceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCe
Q 018248 11 HLALNQ-DHGCFATGT-ET-----------GFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNK 77 (359)
Q Consensus 11 ~~~~s~-~g~~l~~~~-d~-----------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~ 77 (359)
++++.+ +|++++.|+ +. .+.+||..+.+-.....+...+......+++..++..+++ ++. .+..
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~-GG~--~~~~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVT-GGN--DAKK 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEE-CSS--STTC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEe-CCC--CCCc
Confidence 567777 888888876 32 4788998876543333332122222333455555554443 332 3468
Q ss_pred EEEEECCCccEEeeec--cCcceeEEEEecceeEEE--e--c-----CeEEEEEcccceeeeeE----eccCCCceeeee
Q 018248 78 VMIWDDHENRYLGELS--FRSEVKNVRLRRDRIVVV--L--N-----QKVYVYNFTDLKLVDQI----ETVVNPTGLCDV 142 (359)
Q Consensus 78 i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~--~--d-----~~i~i~d~~~~~~~~~~----~~~~~~~~~~~~ 142 (359)
+.+||..+++....-. ....-.++...+++++++ . + ..+.+||..+.+-...- ...........+
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence 9999988876544322 222223456666777766 1 2 46899998766432210 000000011112
Q ss_pred ecCCCccEEEecCCCCe---------eEEEEecCCee-eEEeeccc---------ccccEEEEc-cCCcEEEEEeCCC--
Q 018248 143 SQNAGPMVMACPGLLKG---------QVRVEDYGTKK-SKYITAHA---------SRIASIAMT-LDGRFVATASSKG-- 200 (359)
Q Consensus 143 ~~~~~~~~l~~~g~~d~---------~v~~~~~~~~~-~~~~~~~~---------~~i~~~~~s-~~~~~l~~~~~dg-- 200 (359)
..++ .++++ |..+| .+..|+..... ......+. ..-.++.|. .++++++.|+.++
T Consensus 347 ~~~~-~iyv~--Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~ 423 (656)
T 1k3i_A 347 RSDN-HAWLF--GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQ 423 (656)
T ss_dssp TTTC-SCCEE--ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSS
T ss_pred ecCC-ceEEE--ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCC
Confidence 2222 22232 22333 34445544322 11111111 112334443 3778888887532
Q ss_pred ---------CeEEEEEcCCCcEEEEeecCC-CCcceEEEEecCCCCEEEEEcCC-----------CcEEEEEccCCC
Q 018248 201 ---------TLIRVFNTMDGSLLQEMRRGA-ERAEIYSLAFSSNAQWLAASSDK-----------GTVHVFGLKVDS 256 (359)
Q Consensus 201 ---------~~i~iwd~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~d-----------g~i~iw~~~~~~ 256 (359)
. |.+||..+.+......... ....-.+++..|++++++.|+.+ ..+.+||..+.+
T Consensus 424 ~~~~~~~~~~-v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 424 DSDATTNAHI-ITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SSBCCCCEEE-EECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCcCCcceE-EEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 4 7788887766544330111 11122345667899999998854 457888877643
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.65 E-value=8.7e-05 Score=66.66 Aligned_cols=233 Identities=10% Similarity=0.109 Sum_probs=132.7
Q ss_pred CCEEEEec-CCceEEEEcCCCcceeeeecccCCC--Ccee-EEEEecc---CCEEEEEecCCC---CCCeEEEEECCCcc
Q 018248 18 HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPR--GGTQ-LVSMLFR---SNIICLVNSGPH---QSNKVMIWDDHENR 87 (359)
Q Consensus 18 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~--~~v~-~~~~~~~---~~~~~~~~~~~~---~d~~i~iwd~~~~~ 87 (359)
+..+++++ ++.+..+|.++++........ .+. ..+. ...+..+ +...++++.... .++.|.-+|..+|+
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~-~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFA-DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECS-CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCC-CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 44566666 999999999999888776653 110 0111 0011111 121344432100 26899999999998
Q ss_pred EEeeeccCc-ce-----------------------------------------eEEEEecceeEEE--e-----------
Q 018248 88 YLGELSFRS-EV-----------------------------------------KNVRLRRDRIVVV--L----------- 112 (359)
Q Consensus 88 ~~~~~~~~~-~v-----------------------------------------~~~~~~~~~~~~~--~----------- 112 (359)
.+....... .+ ..+++.|+...+. .
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 877654211 00 1234555433333 2
Q ss_pred ----------c----CeEEEEEcccceeeeeEeccCCC------c-eeeeee---cCCCc-cEEEecCCCCeeEEEEec-
Q 018248 113 ----------N----QKVYVYNFTDLKLVDQIETVVNP------T-GLCDVS---QNAGP-MVMACPGLLKGQVRVEDY- 166 (359)
Q Consensus 113 ----------d----~~i~i~d~~~~~~~~~~~~~~~~------~-~~~~~~---~~~~~-~~l~~~g~~d~~v~~~~~- 166 (359)
| +.|..+|..+++.+..++..... . ..+.+. .+++. .+++. ++.+|.+++.+.
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~-~~~~G~l~~lD~~ 354 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAH-ADRNGFFYVVDRS 354 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEE-ECTTSEEEEEETT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEE-ECCCceEEEEECC
Confidence 2 58999999999999887653221 1 111122 34432 13333 667899998554
Q ss_pred CCeeeEEeeccc-------------c--------------------------------cccEEEEccCCcEEEEEe----
Q 018248 167 GTKKSKYITAHA-------------S--------------------------------RIASIAMTLDGRFVATAS---- 197 (359)
Q Consensus 167 ~~~~~~~~~~~~-------------~--------------------------------~i~~~~~s~~~~~l~~~~---- 197 (359)
+++.+..+.... . .-..++++|+..++++..
T Consensus 355 tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 355 NGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp TCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 444443332211 0 001356677655444432
Q ss_pred -----------------------------CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEE
Q 018248 198 -----------------------------SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVH 248 (359)
Q Consensus 198 -----------------------------~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 248 (359)
.+|. |..||+.+++.+-+...+ .++..-.....+.+++.++.||.++
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGS-LRAMDPVSGKVVWEHKEH---LPLWAGVLATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEE-EEEECTTTCCEEEEEEES---SCCCSCCEEETTTEEEEECTTSEEE
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcce-EEEEECCCCCEEEEecCC---CCCcccceEeCCCEEEEECCCCcEE
Confidence 2577 999999999988777642 1222211222466788899999999
Q ss_pred EEEccCCC
Q 018248 249 VFGLKVDS 256 (359)
Q Consensus 249 iw~~~~~~ 256 (359)
.||.++++
T Consensus 511 A~D~~tG~ 518 (582)
T 1flg_A 511 AFDAKSGK 518 (582)
T ss_dssp EEETTTCC
T ss_pred EEECCCCC
Confidence 99999987
No 268
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.61 E-value=0.00012 Score=58.96 Aligned_cols=258 Identities=13% Similarity=0.161 Sum_probs=167.6
Q ss_pred CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecc
Q 018248 27 TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRD 106 (359)
Q Consensus 27 ~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 106 (359)
..|.|.|+.......++... .. ..-+.|..+.+++-++ ..+.++|+++.+.+..+....+|.--.|-.+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~----Ad--sAIMnP~~~ViALrag-----~~LQiFnletK~klks~~~~e~VvfWkWis~ 117 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPIS----AD--SAIMNPASKVIALKAG-----KTLQIFNIEMKSKMKAHTMTDDVTFWKWISL 117 (365)
T ss_dssp EEEEEEETTSTTSCEEEECC----CS--EEEECSSSSEEEEEET-----TEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred CEEEEEECCCCCCccccccc----cc--eeeeCCCccEEEEecC-----CeEEEechHHhhhhcceecCCccEEEEecCC
Confidence 46888899877776666652 32 2345777787777662 7899999999999999998888888888665
Q ss_pred eeEEE-ecCeEEEEEccc-ceeeeeEeccC--CCceeeeeecCCCccEEEecCC------CCeeEEEEecCCeeeEEeec
Q 018248 107 RIVVV-LNQKVYVYNFTD-LKLVDQIETVV--NPTGLCDVSQNAGPMVMACPGL------LKGQVRVEDYGTKKSKYITA 176 (359)
Q Consensus 107 ~~~~~-~d~~i~i~d~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~g~------~d~~v~~~~~~~~~~~~~~~ 176 (359)
..+.. .+..|+.|++.. ..+.+.+..|. .....+.+..+.+..+++..|- -.|.+.++..+.+..+.+.+
T Consensus 118 ~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieG 197 (365)
T 2xzh_A 118 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 197 (365)
T ss_dssp SEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECC
T ss_pred CeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeee
Confidence 55444 999999999964 45555555433 2344555555555444443332 35788889999888899999
Q ss_pred ccccccEEEEccC---CcEEEEEeC--C-CCeEEEEEcCCC---c-----EEEE--eecCCCCcceEEEEecCCCCEEEE
Q 018248 177 HASRIASIAMTLD---GRFVATASS--K-GTLIRVFNTMDG---S-----LLQE--MRRGAERAEIYSLAFSSNAQWLAA 240 (359)
Q Consensus 177 ~~~~i~~~~~s~~---~~~l~~~~~--d-g~~i~iwd~~~~---~-----~~~~--~~~~~~~~~i~~~~~s~~~~~l~~ 240 (359)
|...-..+.+.-+ .++++.+.. . +. +.|-++... . .... +..........++..|+.-..+..
T Consensus 198 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~k-LhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 198 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp SEEEEEEECCTTCSSCEEEEEEEEEETTEEE-EEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcE-EEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE
Confidence 8776544444321 123333332 1 45 888887432 1 1111 111112345678888888888888
Q ss_pred EcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCC
Q 018248 241 SSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNN 320 (359)
Q Consensus 241 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 320 (359)
-+.-|.|++||++++... + .-+...+.|...+-..+..
T Consensus 277 iTK~G~ihlyDleTgt~i-----------------------------------~-------~nrIS~d~iF~ta~~~~~~ 314 (365)
T 2xzh_A 277 ITKYGYIHLYDLETGTCI-----------------------------------Y-------MNRISGETIFVTAPHEATA 314 (365)
T ss_dssp EETTSEEEEEETTTCCEE-----------------------------------E-------EEECCSSCEEEEEEEGGGT
T ss_pred EeCCcEEEEEEcccCcEE-----------------------------------E-------EeccCCCceEEecccCCCC
Confidence 899999999999998732 0 0123345566556555555
Q ss_pred EEEEEecCCeEEEEEeCC
Q 018248 321 TIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 321 ~l~~~~~dg~i~v~~~~~ 338 (359)
-++.....|.|.--.++.
T Consensus 315 Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 315 GIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp EEEEEETTCEEEEEEECT
T ss_pred cEEEEcCCCEEEEEEECc
Confidence 666666788766555554
No 269
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.59 E-value=5.5e-05 Score=62.19 Aligned_cols=188 Identities=9% Similarity=-0.013 Sum_probs=105.6
Q ss_pred ceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE-e--c--CeEEEEEccccee
Q 018248 52 GTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV-L--N--QKVYVYNFTDLKL 126 (359)
Q Consensus 52 ~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~--d--~~i~i~d~~~~~~ 126 (359)
....+++.++++ +.++.. .++.|..||... +....+.....+..+++.+++++++ . . ..|..+|..+++.
T Consensus 33 ~pegia~~~~g~-lyv~d~---~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 33 FLENLASAPDGT-IFVTNH---EVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CEEEEEECTTSC-EEEEET---TTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CcceEEECCCCC-EEEEeC---CCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 345667777665 333332 358899999654 4444445556788999999998766 2 2 2477777777765
Q ss_pred eeeEeccCC-CceeeeeecCCCccEEEecCCCCeeEEEEecCCe--eeEEee---------cccccccEEEEccCCcEEE
Q 018248 127 VDQIETVVN-PTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK--KSKYIT---------AHASRIASIAMTLDGRFVA 194 (359)
Q Consensus 127 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~--~~~~~~---------~~~~~i~~~~~s~~~~~l~ 194 (359)
......... ....++..+ +.. ++++ ...++.|++.+.... .+.... ..-...+.+ +|+++.|+
T Consensus 108 ~~~~~~~~~~~~~g~~~~~-~~~-~~v~-d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLS-DTQ-YLTA-DSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp EEEEECTTCSCEEEEEESS-SSE-EEEE-ETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred EEEEeCCCccccCcccccC-CCc-EEEE-ECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 433322111 111222222 222 3333 334667777655432 121111 011123445 88888776
Q ss_pred EEeC-CCCeEEEEEcCC-CcE--EEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEcc
Q 018248 195 TASS-KGTLIRVFNTMD-GSL--LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLK 253 (359)
Q Consensus 195 ~~~~-dg~~i~iwd~~~-~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 253 (359)
.+.. .+. |..|++.. ++. ...+.. ......++++++|+++++....+.|.+++..
T Consensus 183 v~d~~~~~-I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 183 VSNTEKML-LLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEETTTTE-EEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEeCCCCE-EEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 6654 556 99999864 321 112211 1245678999999887776667889998864
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.55 E-value=0.00022 Score=58.85 Aligned_cols=175 Identities=10% Similarity=-0.010 Sum_probs=110.8
Q ss_pred CCeEEEEECCCccEEeeeccCcceeEEEEecce-eEEE---ecCeEEEEEccc----ceeeeeEeccCCCceeeeeecCC
Q 018248 75 SNKVMIWDDHENRYLGELSFRSEVKNVRLRRDR-IVVV---LNQKVYVYNFTD----LKLVDQIETVVNPTGLCDVSQNA 146 (359)
Q Consensus 75 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~---~d~~i~i~d~~~----~~~~~~~~~~~~~~~~~~~~~~~ 146 (359)
...|+..|+.+.+....+.....+..++|++.+ .++. ..+.|..+++.. ......+.........+++.+.+
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 467999998887766555555667899999854 3333 568999999865 22222222222334567888777
Q ss_pred CccEEEecCCCCeeEEEEecCCeeeEEee-cccccccEEEEccCCcEEEEEeCC--CCeEEEEEcCCCcEEEEeecCCCC
Q 018248 147 GPMVMACPGLLKGQVRVEDYGTKKSKYIT-AHASRIASIAMTLDGRFVATASSK--GTLIRVFNTMDGSLLQEMRRGAER 223 (359)
Q Consensus 147 ~~~~l~~~g~~d~~v~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~d--g~~i~iwd~~~~~~~~~~~~~~~~ 223 (359)
..++++- ...+.|.+.+.++.....+. ........++++|.+..|+.+... +. |..+++. |.....+... .-
T Consensus 89 ~~ly~~d--~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~-I~~~~~d-G~~~~~~~~~-~~ 163 (316)
T 1ijq_A 89 SNIYWTD--SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLN-GVDIYSLVTE-NI 163 (316)
T ss_dssp TEEEEEE--TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE-EEEEETT-SCCEEEEECS-SC
T ss_pred CeEEEEE--CCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCe-EEEEcCC-CCCeEEEEEC-CC
Confidence 6655553 24677888777775544443 233567899999976655555433 56 8888864 4444444221 23
Q ss_pred cceEEEEecCCCCEEEEE-cCCCcEEEEEccC
Q 018248 224 AEIYSLAFSSNAQWLAAS-SDKGTVHVFGLKV 254 (359)
Q Consensus 224 ~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~~ 254 (359)
.....+++++++..|..+ +..+.|..+|++.
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 467899999877666554 4567899999874
No 271
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.55 E-value=0.00022 Score=58.81 Aligned_cols=227 Identities=7% Similarity=-0.037 Sum_probs=135.0
Q ss_pred EEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEe-eec-cCcc
Q 018248 20 CFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLG-ELS-FRSE 97 (359)
Q Consensus 20 ~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~-~~~-~~~~ 97 (359)
+|+.+....|+..+++.........+. .......++|.+..+.+.++.. ..+.|..+++..+.... .+. .-..
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~--~~~~~~~ld~d~~~~~lyw~D~---~~~~I~r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVG--GLEDAAAVDFVFSHGLIYWSDV---SEEAIKRTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEE--EEEEEEEEEEEGGGTEEEEEET---TTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred EEEEEccCeEEEEECCCCceEEEEEec--CCCccEEEEEEeCCCEEEEEEC---CCCcEEEEEccCCCceEEEEcCCCCC
Confidence 566666778999999865322222221 1123445667666677777654 35889999987653221 122 2245
Q ss_pred eeEEEEec-ceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEE
Q 018248 98 VKNVRLRR-DRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKY 173 (359)
Q Consensus 98 v~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~ 173 (359)
...+++.+ .+.+.. ..+.|.++++........+.........+++.|.+..++.+-. ...+.|...+.++.....
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~-~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDW-GEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEEC-SSSCEEEEEETTSCSCEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEec-CCCCEEEEEEcCCCCeEE
Confidence 67888886 444444 5678999998543222222223333456788887665555432 235677777777755544
Q ss_pred ee-cccccccEEEEccCCcEEEEEeC-CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEE
Q 018248 174 IT-AHASRIASIAMTLDGRFVATASS-KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFG 251 (359)
Q Consensus 174 ~~-~~~~~i~~~~~s~~~~~l~~~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 251 (359)
+. ..-...+.++++|++..|..+.. .+. |..+|+..... ..+... .......+++. .+.++.+-...+.|..++
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~-I~~~d~dG~~~-~~~~~~-~~~~P~glav~-~~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDGTNR-QAVVKG-SLPHPFALTLF-EDILYWTDWSTHSILACN 235 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSC-EEEECS-CCSCEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCE-EEEEcCCCCce-EEEecC-CCCCceEEEEe-CCEEEEEecCCCeEEEEE
Confidence 42 22345689999997776666654 455 99999754332 233221 23456778875 345556666678899898
Q ss_pred ccCCC
Q 018248 252 LKVDS 256 (359)
Q Consensus 252 ~~~~~ 256 (359)
..+++
T Consensus 236 ~~~G~ 240 (318)
T 3sov_A 236 KYTGE 240 (318)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 87665
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.54 E-value=1.7e-05 Score=73.67 Aligned_cols=241 Identities=11% Similarity=0.018 Sum_probs=127.3
Q ss_pred ceEEEEEc-cCCCEEEEec--CC----ceEEEEcCCC-cceeeeecccCCCCceeEEEEeccCCEEEEEecCCC-CCCeE
Q 018248 8 TIHHLALN-QDHGCFATGT--ET----GFRVYLSDPY-KPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH-QSNKV 78 (359)
Q Consensus 8 ~v~~~~~s-~~g~~l~~~~--d~----~i~iw~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-~d~~i 78 (359)
.+...+|| |||++||.+. +| .|+++|++++ +... ..+. .....+.|+++++.++++..... ....|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~~----~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKVS----GTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCEE----EECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-cccc----CceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 67889999 9999998765 22 3999999987 5221 1121 12345679999988888764210 11478
Q ss_pred EEEECCCccE--Eeeec--cCcceeEEEEecceeEEE------ecCeEEEEEcccce-ee--eeEe-ccCCCceeeeeec
Q 018248 79 MIWDDHENRY--LGELS--FRSEVKNVRLRRDRIVVV------LNQKVYVYNFTDLK-LV--DQIE-TVVNPTGLCDVSQ 144 (359)
Q Consensus 79 ~iwd~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~~------~d~~i~i~d~~~~~-~~--~~~~-~~~~~~~~~~~~~ 144 (359)
.++++.+++. ...+. .......+.|+||+++++ ....|+++|+.++. .. ..+. ..........+.
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~- 328 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH- 328 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE-
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee-
Confidence 8889877642 22222 233456789999998877 24578889987652 12 2222 222222222222
Q ss_pred CCCccEEEecCC--CCeeEEEEecCC-eeeEE-eecccc--cccEEEEccCCcEEEEEeCCCC-eEEEEEc-------CC
Q 018248 145 NAGPMVMACPGL--LKGQVRVEDYGT-KKSKY-ITAHAS--RIASIAMTLDGRFVATASSKGT-LIRVFNT-------MD 210 (359)
Q Consensus 145 ~~~~~~l~~~g~--~d~~v~~~~~~~-~~~~~-~~~~~~--~i~~~~~s~~~~~l~~~~~dg~-~i~iwd~-------~~ 210 (359)
.++.+++.+.-. ....|...+... ...+. +..+.. .+..+.+. .+.++++...++. .|.++++ .+
T Consensus 329 ~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~ 407 (751)
T 2xe4_A 329 GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKA 407 (751)
T ss_dssp TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCT
T ss_pred eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccC
Confidence 255555554211 223555555542 22222 333333 34445543 2334555566664 1455665 33
Q ss_pred CcEEEEeecCCCCcceEEEEe----cCCCC-EEEEEcCC---CcEEEEEccCCC
Q 018248 211 GSLLQEMRRGAERAEIYSLAF----SSNAQ-WLAASSDK---GTVHVFGLKVDS 256 (359)
Q Consensus 211 ~~~~~~~~~~~~~~~i~~~~~----s~~~~-~l~~~~~d---g~i~iw~~~~~~ 256 (359)
++....+... ....+..+.+ ++++. ++++.+.. ..+..+|+.+++
T Consensus 408 g~~~~~l~l~-~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 408 GTGLREVVME-EPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp TTCCEECCCC-CSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred CccceEECCC-CceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4313344321 1123444533 34655 44443332 356777776554
No 273
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=0.00011 Score=63.33 Aligned_cols=237 Identities=9% Similarity=0.094 Sum_probs=133.5
Q ss_pred ceEEEEEcc-CCCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC-CCCeEEEEECC
Q 018248 8 TIHHLALNQ-DHGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH-QSNKVMIWDDH 84 (359)
Q Consensus 8 ~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-~d~~i~iwd~~ 84 (359)
....|+++| ++..|.++. .+.|+.++++......... .......+++.++++.++++..+.. ....+...+ .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~----~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS----GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-R 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC----CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec----CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-C
Confidence 457889998 455666655 6788889887644332211 2345677888888886666653210 112344444 3
Q ss_pred CccEE--eeeccCcceeEEEEec-ceeEEE---ecCeEEEEEcccceeeeeEecc-CCCceeeeeecCCCccEEEecCCC
Q 018248 85 ENRYL--GELSFRSEVKNVRLRR-DRIVVV---LNQKVYVYNFTDLKLVDQIETV-VNPTGLCDVSQNAGPMVMACPGLL 157 (359)
Q Consensus 85 ~~~~~--~~~~~~~~v~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~ 157 (359)
.+... ..+........++++| ++.+++ .++.|..++...+......... ......++++|+++.++++- ..
T Consensus 213 ~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d--~~ 290 (430)
T 3tc9_A 213 ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV--VN 290 (430)
T ss_dssp GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE--TT
T ss_pred CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE--CC
Confidence 33222 2222234467888999 676665 5789999998766542222221 12345689999988666654 24
Q ss_pred CeeEEEEecCCe--e---eEEeecc---------------ccccc-EEEEc--------cCCcEEEEEeCCCCeEEEEEc
Q 018248 158 KGQVRVEDYGTK--K---SKYITAH---------------ASRIA-SIAMT--------LDGRFVATASSKGTLIRVFNT 208 (359)
Q Consensus 158 d~~v~~~~~~~~--~---~~~~~~~---------------~~~i~-~~~~s--------~~~~~l~~~~~dg~~i~iwd~ 208 (359)
.+.|..++.++. . ...+.+. -.... .++.. ++|.+.++=...+. |+.++
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~-I~~i~- 368 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC-IRILT- 368 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE-EEEEC-
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE-EEEEC-
Confidence 566776444321 1 1222211 00122 44443 34555544445566 88888
Q ss_pred CCCcEEEEeecC---C----C--------CcceEEEEecC-CCCEEEEEcCCCcEEEEEcc
Q 018248 209 MDGSLLQEMRRG---A----E--------RAEIYSLAFSS-NAQWLAASSDKGTVHVFGLK 253 (359)
Q Consensus 209 ~~~~~~~~~~~~---~----~--------~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~ 253 (359)
.+|......-.+ . . -.....++++| ++.++++-.....|+.++++
T Consensus 369 ~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 369 PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 466544333210 0 0 12578999999 46666666667788888764
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.53 E-value=0.00032 Score=59.66 Aligned_cols=175 Identities=9% Similarity=-0.009 Sum_probs=110.3
Q ss_pred CCeEEEEECCCccEEeeeccCcceeEEEEecce-eEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccE
Q 018248 75 SNKVMIWDDHENRYLGELSFRSEVKNVRLRRDR-IVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMV 150 (359)
Q Consensus 75 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (359)
...|+.+++..............+..++|++.+ .++. ..+.|+.+++........+.........+++.+.+..++
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY 174 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLY 174 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEE
T ss_pred CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEE
Confidence 467888888776655545545568899999754 4433 568999999865544333332223335678888777665
Q ss_pred EEecCCCCeeEEEEecCCeeeEEee-cccccccEEEEccCCcEEEEEeC-C-CCeEEEEEcCCCcEEEEeecCCCCcceE
Q 018248 151 MACPGLLKGQVRVEDYGTKKSKYIT-AHASRIASIAMTLDGRFVATASS-K-GTLIRVFNTMDGSLLQEMRRGAERAEIY 227 (359)
Q Consensus 151 l~~~g~~d~~v~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~-d-g~~i~iwd~~~~~~~~~~~~~~~~~~i~ 227 (359)
++- ...+.|.+.+.++.....+. ..-.....++++|.+..|+.+.. . +. |..+++........... .-....
T Consensus 175 ~~d--~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~-I~r~~~dG~~~~~~~~~--~~~~Pn 249 (386)
T 3v65_B 175 WTD--SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMDGSGRRIIADT--HLFWPN 249 (386)
T ss_dssp EEE--TTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCSCEEEECS--SCSCEE
T ss_pred EEc--CCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCE-EEEEeCCCCCcEEEEEC--CCCCee
Confidence 554 23567777666665444433 23356789999987766655543 3 56 88888754333322222 234678
Q ss_pred EEEecCCCCEEEEE-cCCCcEEEEEccC
Q 018248 228 SLAFSSNAQWLAAS-SDKGTVHVFGLKV 254 (359)
Q Consensus 228 ~~~~s~~~~~l~~~-~~dg~i~iw~~~~ 254 (359)
.++++|++..|..+ +..+.|..++++.
T Consensus 250 Glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 250 GLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred eEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 99999876655544 4567788888764
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.49 E-value=0.00078 Score=62.51 Aligned_cols=227 Identities=11% Similarity=-0.042 Sum_probs=135.0
Q ss_pred EEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCc----cEEeeec-c
Q 018248 20 CFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHEN----RYLGELS-F 94 (359)
Q Consensus 20 ~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~----~~~~~~~-~ 94 (359)
+|+.+....|+..+++..+...... ....+..+++.+..+.++++.. ..+.|+.+++... .....+. .
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~----~~~~~~gl~~d~~~~~lY~sD~---~~~~I~~~~l~g~~~~~~~~~vi~~~ 469 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRD 469 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEET---TTTEEEEEEC--------CEEEECSS
T ss_pred ccccccccceeEeeccCCcceeeec----CCCceEEEeecccCCeeEEeec---cceeEEEEeccCCCCCcceeEEEecC
Confidence 5566666778888887544332221 2345566777776677776664 3488988887653 2222233 3
Q ss_pred CcceeEEEEecce-eEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCee
Q 018248 95 RSEVKNVRLRRDR-IVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKK 170 (359)
Q Consensus 95 ~~~v~~~~~~~~~-~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~ 170 (359)
......|++.+.+ ++++ ..+.|.+.++........+.........+++.|....+|++-.| ..+.|.+...++..
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g-~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVD 548 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCC
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCC-CCCeEEEEecCCCc
Confidence 3556788988765 3333 66899999986444333333333445678888887766665422 23678877777766
Q ss_pred eEEeec-ccccccEEEEccCCcEEEEEeC-CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEE
Q 018248 171 SKYITA-HASRIASIAMTLDGRFVATASS-KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVH 248 (359)
Q Consensus 171 ~~~~~~-~~~~i~~~~~s~~~~~l~~~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 248 (359)
...+.. .-.....|++++.+..|+.+.. ... |..+++........+.....-.....|++.. ++++++-...+.|.
T Consensus 549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~-I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~ 626 (791)
T 3m0c_C 549 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIF 626 (791)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEE
T ss_pred eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc-EEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEE
Confidence 655543 3356789999987777766654 445 9999985444333333211223455777643 34445555667787
Q ss_pred EEEccCCC
Q 018248 249 VFGLKVDS 256 (359)
Q Consensus 249 iw~~~~~~ 256 (359)
..+..+++
T Consensus 627 ~~dk~tG~ 634 (791)
T 3m0c_C 627 SANRLTGS 634 (791)
T ss_dssp EEETTTCC
T ss_pred EEeCCCCc
Confidence 77766654
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.48 E-value=0.00037 Score=58.35 Aligned_cols=176 Identities=10% Similarity=-0.003 Sum_probs=110.5
Q ss_pred CCeEEEEECCCccEEeeeccCcceeEEEEeccee-EEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccE
Q 018248 75 SNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRI-VVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMV 150 (359)
Q Consensus 75 d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (359)
...|+..++........+.....+..++|++... ++. ..+.|+.+++........+.........+++.+.+..++
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly 131 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLY 131 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEE
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEE
Confidence 4678888877665554444445688999997543 333 568899999865543333332223345678888777665
Q ss_pred EEecCCCCeeEEEEecCCeeeEEee-cccccccEEEEccCCcEEEEEe-CC-CCeEEEEEcCCCcEEEEeecCCCCcceE
Q 018248 151 MACPGLLKGQVRVEDYGTKKSKYIT-AHASRIASIAMTLDGRFVATAS-SK-GTLIRVFNTMDGSLLQEMRRGAERAEIY 227 (359)
Q Consensus 151 l~~~g~~d~~v~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~-~d-g~~i~iwd~~~~~~~~~~~~~~~~~~i~ 227 (359)
++- ...+.|.+.+.++.....+. ..-.....++++|.+..|+... .. +. |..+++.. .....+... .-....
T Consensus 132 ~~d--~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~-I~r~~~dG-~~~~~~~~~-~~~~Pn 206 (349)
T 3v64_C 132 WTD--SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMDG-SGRRIIADT-HLFWPN 206 (349)
T ss_dssp EEE--TTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETTS-CSCEESCCS-SCSCEE
T ss_pred EEc--CCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCE-EEEEeCCC-CCcEEEEEC-CCCCcc
Confidence 554 24567888777775544443 3335678999999666555544 34 56 88888754 333333211 234678
Q ss_pred EEEecCCCCEEEEE-cCCCcEEEEEccCC
Q 018248 228 SLAFSSNAQWLAAS-SDKGTVHVFGLKVD 255 (359)
Q Consensus 228 ~~~~s~~~~~l~~~-~~dg~i~iw~~~~~ 255 (359)
.++++|++..|..+ ...+.|..++++..
T Consensus 207 Gla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 207 GLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred eEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 99999876665554 45677888888653
No 277
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.45 E-value=0.00047 Score=57.98 Aligned_cols=258 Identities=13% Similarity=0.168 Sum_probs=169.2
Q ss_pred CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecc
Q 018248 27 TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRD 106 (359)
Q Consensus 27 ~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 106 (359)
..+.|.|+.......++... .. ..-++|..+.+++-+ ..++.++|+++.+.+..+....+|.--.|-.+
T Consensus 48 ~~vvIiDl~~~~~~~rrpi~----Ad--sAIMnP~~~iiALra-----g~~lQiFnle~K~klks~~~~e~VvfWkWis~ 116 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPIS----AD--SAIMNPASKVIALKA-----GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL 116 (494)
T ss_dssp CEEEEEETTSTTSCEEEECC----CS--EEEECSSSSCEEEEE-----TTEEEEEETTTTEEEEEEECSSCCCEEEEEET
T ss_pred CeEEEEECCCCCcceecccc----cc--eeeeCCCCcEEEEec-----CCeEEEEchHHhhhhcceecCCCceEEEecCC
Confidence 46888898877766655552 22 334677778777766 28999999999999999997778888888555
Q ss_pred eeE-EEecCeEEEEEccc-ceeeeeEeccC--CCceeeeeecCCCccEEEecCC------CCeeEEEEecCCeeeEEeec
Q 018248 107 RIV-VVLNQKVYVYNFTD-LKLVDQIETVV--NPTGLCDVSQNAGPMVMACPGL------LKGQVRVEDYGTKKSKYITA 176 (359)
Q Consensus 107 ~~~-~~~d~~i~i~d~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~g~------~d~~v~~~~~~~~~~~~~~~ 176 (359)
..+ ++.+..|+-|++.. ..+.+.+..|. .....+.+..+.+..+++..|- -.|.+.++..+.+..+.+.+
T Consensus 117 ~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieG 196 (494)
T 1bpo_A 117 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (494)
T ss_dssp TEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECC
T ss_pred CeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchhee
Confidence 444 44999999999953 34555565433 2344555555555544543332 35788889999998999999
Q ss_pred ccccccEEEEccCC---cEEEEEeCC---CCeEEEEEcCCC--------cEEEEe--ecCCCCcceEEEEecCCCCEEEE
Q 018248 177 HASRIASIAMTLDG---RFVATASSK---GTLIRVFNTMDG--------SLLQEM--RRGAERAEIYSLAFSSNAQWLAA 240 (359)
Q Consensus 177 ~~~~i~~~~~s~~~---~~l~~~~~d---g~~i~iwd~~~~--------~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~ 240 (359)
|......+.+.-+. .+++.+... +. +.|-++... +....+ ..........++..|+.-..+..
T Consensus 197 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~k-Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp SEEEEEEEECTTCSSEEEEEEEEECSTTCCE-EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcE-EEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence 98776655553221 244444332 55 888887432 111111 11112345678888988888888
Q ss_pred EcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCC
Q 018248 241 SSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNN 320 (359)
Q Consensus 241 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 320 (359)
.+.-|.|++||++++... |. -+...+.|...+-..+..
T Consensus 276 iTK~G~i~lyDleTgt~i--------------------------~~----------------nrIs~~~iF~t~~~~~~~ 313 (494)
T 1bpo_A 276 ITKYGYIHLYDLETGTCI--------------------------YM----------------NRISGETIFVTAPHEATA 313 (494)
T ss_dssp EETTSEEEEEETTTCCEE--------------------------EE----------------EECCSSCEEEEEEETTTT
T ss_pred EecCceEEEEecccceee--------------------------ee----------------ecccCCceEEecccCCCC
Confidence 999999999999998732 00 123344566666655556
Q ss_pred EEEEEecCCeEEEEEeCC
Q 018248 321 TIVIVGLDGSYYKCEFDP 338 (359)
Q Consensus 321 ~l~~~~~dg~i~v~~~~~ 338 (359)
-++.....|.|.--.++.
T Consensus 314 Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 314 GIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEEEEETTCEEEEEEECT
T ss_pred cEEEEccCceEEEEEEcc
Confidence 666667788776655554
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.45 E-value=0.00029 Score=55.60 Aligned_cols=197 Identities=9% Similarity=0.079 Sum_probs=124.3
Q ss_pred CCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccC--cceeEEEEecceeEEE---ecCeEEEEEcc
Q 018248 48 NPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFR--SEVKNVRLRRDRIVVV---LNQKVYVYNFT 122 (359)
Q Consensus 48 ~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~---~d~~i~i~d~~ 122 (359)
|-...+..+++.++.+.++.+.. .++.|...|.. ++.++.+... .....+++.+++.+++ .++.+.++++.
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d---~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTIN---KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEE---TTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred CcccCcceeEEeCCCCEEEEEEC---CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 44567888999988887877776 46899999977 8888887633 5788899999888765 56789999874
Q ss_pred cce---eeeeEec------cCCCceeeeeecCCCccEEEecCCCCeeEEEEe--cCCeeeEEee-------cccccccEE
Q 018248 123 DLK---LVDQIET------VVNPTGLCDVSQNAGPMVMACPGLLKGQVRVED--YGTKKSKYIT-------AHASRIASI 184 (359)
Q Consensus 123 ~~~---~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~--~~~~~~~~~~-------~~~~~i~~~ 184 (359)
... .+..... .......+++.|.++.++++. ......|+.++ .....+..+. .+...+.++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~-E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK-EKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE-ESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE-CcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 432 2222221 122346789999888777665 22222344344 1111222221 123457899
Q ss_pred EEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCC--C-----CcceEEEEecCCCCEEEEEcCCCcEEEEE
Q 018248 185 AMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGA--E-----RAEIYSLAFSSNAQWLAASSDKGTVHVFG 251 (359)
Q Consensus 185 ~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~--~-----~~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 251 (359)
+++|....|.+-+.....+.++|. +++.+..+.... + -.....|+|.++|++.++ ++-+.+++|.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 999976555544444443888985 566665554321 1 126689999999986555 6666555553
No 279
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.44 E-value=0.0006 Score=58.83 Aligned_cols=236 Identities=10% Similarity=0.043 Sum_probs=134.5
Q ss_pred ceEEEEEccC--CCEEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCC-eEEEEEC
Q 018248 8 TIHHLALNQD--HGCFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSN-KVMIWDD 83 (359)
Q Consensus 8 ~v~~~~~s~~--g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~-~i~iwd~ 83 (359)
....|+|+|+ +..|.++. .+.|+.++.+++..... . +.......+++.++++ +.++..+...+. .+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~--~--~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK--T--TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE--C--CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe--e--cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4578999995 45565555 68899999876543322 1 1234567788888888 444432110112 2333332
Q ss_pred CCccE-EeeeccCcceeEEEEec-ceeEEE---ecCeEEEEEcccceeeeeE-eccC-CCceeeeeecCCCccEEEecCC
Q 018248 84 HENRY-LGELSFRSEVKNVRLRR-DRIVVV---LNQKVYVYNFTDLKLVDQI-ETVV-NPTGLCDVSQNAGPMVMACPGL 156 (359)
Q Consensus 84 ~~~~~-~~~~~~~~~v~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~g~ 156 (359)
..+.. ...+..-.....++++| ++.+.+ .++.|+.+|..++.....+ .... .....++++|+++.++++-.
T Consensus 215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~-- 292 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN-- 292 (433)
T ss_dssp GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET--
T ss_pred CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC--
Confidence 22111 01122234456788999 777665 5678999998766652332 2111 11234889999876666542
Q ss_pred CCeeEEEEecCC--ee---eEEeecc---------------cccccEEEE---------ccCCcEEEEEeCCCCeEEEEE
Q 018248 157 LKGQVRVEDYGT--KK---SKYITAH---------------ASRIASIAM---------TLDGRFVATASSKGTLIRVFN 207 (359)
Q Consensus 157 ~d~~v~~~~~~~--~~---~~~~~~~---------------~~~i~~~~~---------s~~~~~l~~~~~dg~~i~iwd 207 (359)
..+.|+..+.+. .. ...+.+. -.....+++ .++|.+.++-...+. |+.++
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~-I~~~~ 371 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT-VRVLT 371 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE-EEEEC
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCE-EEEEC
Confidence 456777655432 11 1122211 123566888 677776666556666 99998
Q ss_pred cCCCcEEEEeecCCC----------------CcceEEEEec-CCCCEEEEEcCCCcEEEEEcc
Q 018248 208 TMDGSLLQEMRRGAE----------------RAEIYSLAFS-SNAQWLAASSDKGTVHVFGLK 253 (359)
Q Consensus 208 ~~~~~~~~~~~~~~~----------------~~~i~~~~~s-~~~~~l~~~~~dg~i~iw~~~ 253 (359)
. +|... .+.+... -.....++++ ++|.++++-...+.|+.++++
T Consensus 372 ~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 372 P-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp T-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred C-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 4 66443 3322100 1247889999 677777776677888888765
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.40 E-value=0.00075 Score=58.21 Aligned_cols=147 Identities=14% Similarity=0.103 Sum_probs=86.0
Q ss_pred eEEEEec-cCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE-ecC-------eEEEEEcccc
Q 018248 54 QLVSMLF-RSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV-LNQ-------KVYVYNFTDL 124 (359)
Q Consensus 54 ~~~~~~~-~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~d~-------~i~i~d~~~~ 124 (359)
..+++.+ +...+.++. ..+.|+.+|+.+++.............+++++++..+. .|. .+..++. .+
T Consensus 140 ~~lavdp~~~g~Lyv~d----~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVG----EQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CEEEEETTEEEEEEEEE----BTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CEEEECCCCCCeEEEEe----CCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 4566665 344444444 22788899987766554444556688999999987444 321 3444443 33
Q ss_pred eee--eeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEe-ec-ccccccEEEEccCCcEEEEEe-CC
Q 018248 125 KLV--DQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYI-TA-HASRIASIAMTLDGRFVATAS-SK 199 (359)
Q Consensus 125 ~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~-~~-~~~~i~~~~~s~~~~~l~~~~-~d 199 (359)
... ..+.. ......+++.|+...++++- ..++.|..++.++.....+ .. .......++|+|+|++|+.+. ..
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d--~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNS--WNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEE--TTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEE--CCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 221 22322 22335677888555544443 3466787777765544222 21 123467899999999666655 45
Q ss_pred CCeEEEEEcC
Q 018248 200 GTLIRVFNTM 209 (359)
Q Consensus 200 g~~i~iwd~~ 209 (359)
+. |..++..
T Consensus 292 ~~-I~~~~~d 300 (430)
T 3tc9_A 292 HY-ILRSDYD 300 (430)
T ss_dssp TE-EEEEEEE
T ss_pred CE-EEEEeCC
Confidence 55 8888764
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.37 E-value=0.00086 Score=57.26 Aligned_cols=206 Identities=9% Similarity=-0.017 Sum_probs=123.4
Q ss_pred CCceEEEEEccCCCEEEEec--CCceEEEEcCCCc--ceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEE
Q 018248 6 PITIHHLALNQDHGCFATGT--ETGFRVYLSDPYK--PIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIW 81 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iw 81 (359)
...+..|+|++.+..|..+. .+.|+.++++... ......+. ........+++.+....+.++.. ..+.|.+.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-~~~~~p~glavD~~~~~lY~~d~---~~~~I~~~ 186 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDS---VLGTVSVA 186 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-SSCSCEEEEEEETTTTEEEEEET---TTTEEEEE
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-CCCCCcccEEEEecCCceEEEEC---CCCeEEEE
Confidence 35678999998766665554 6778888887521 01111111 11344566777776666666654 35889999
Q ss_pred ECCCccEEeeec-cCcceeEEEEecce-eEEEe----cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecC
Q 018248 82 DDHENRYLGELS-FRSEVKNVRLRRDR-IVVVL----NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 82 d~~~~~~~~~~~-~~~~v~~~~~~~~~-~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 155 (359)
++........+. .-.....+++.|.+ .++.. .+.|...++........+...-.....+++.+++..++++-
T Consensus 187 ~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD-- 264 (400)
T 3p5b_L 187 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD-- 264 (400)
T ss_dssp CTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE--
T ss_pred eCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEE--
Confidence 977654444443 33557899999854 44332 36788888744332222222223446788998888766664
Q ss_pred CCCeeEEEEecCCeeeEEeecc---cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 156 LLKGQVRVEDYGTKKSKYITAH---ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 156 ~~d~~v~~~~~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
...+.|...+.++...+.+... -.....+++. .+.++++-...+. |..+|..+|+.+..+..
T Consensus 265 ~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~-V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 265 SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGSDVNLLAE 329 (400)
T ss_dssp TTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS-EEEEESSSCCCCEEEEC
T ss_pred CCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe-EEEEEcCCCCceEEEec
Confidence 3466788877777655554321 2334566663 3444555556667 88888778877666654
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.35 E-value=0.0019 Score=60.45 Aligned_cols=237 Identities=12% Similarity=0.018 Sum_probs=134.8
Q ss_pred CCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeec-----c-cCCCCceeEEEEeccCCEEEEEecCCCCCCeEE
Q 018248 6 PITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDF-----D-RNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~-----~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~ 79 (359)
...|.++...++|.+-+...++.|..|+............ . .-....|..+....++ .+.+++ .++-|.
T Consensus 312 ~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lWigt----~~~Gl~ 386 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-KLWIGT----DGGGIN 386 (781)
T ss_dssp SSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS-CEEEEE----BSSCEE
T ss_pred CCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC-CEEEEe----CCCcEE
Confidence 4679999999988755444388899998775432211100 0 0012345544443332 333333 346788
Q ss_pred EEECCCccEEeee---c-cCcceeEEEEecceeEEE-e-cCeEEEEEcccceeeeeEe--ccCCCceeeeeecCCCccEE
Q 018248 80 IWDDHENRYLGEL---S-FRSEVKNVRLRRDRIVVV-L-NQKVYVYNFTDLKLVDQIE--TVVNPTGLCDVSQNAGPMVM 151 (359)
Q Consensus 80 iwd~~~~~~~~~~---~-~~~~v~~~~~~~~~~~~~-~-d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l 151 (359)
.++..+++..... . ....|.++...+++.+.+ . ++.|..+|..+++...... .....+. ++..+.+..+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~--~i~~d~~g~lw 464 (781)
T 3v9f_A 387 VFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVR--VFYEDKNKKIW 464 (781)
T ss_dssp EEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEE--EEEECTTSEEE
T ss_pred EEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEE--EEEECCCCCEE
Confidence 8997665433211 1 236788898888887766 3 5789999986665432211 1123344 34444443334
Q ss_pred EecCCCCeeEEEEecCCeeeEEeec-c-----cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec--CCCC
Q 018248 152 ACPGLLKGQVRVEDYGTKKSKYITA-H-----ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR--GAER 223 (359)
Q Consensus 152 ~~~g~~d~~v~~~~~~~~~~~~~~~-~-----~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~--~~~~ 223 (359)
+.+ ..| +..++........+.. . ...|.++...++|.+. .|+..+. +..||..+++.. .+.. +...
T Consensus 465 igt--~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~~~G-l~~~~~~~~~~~-~~~~~~~l~~ 538 (781)
T 3v9f_A 465 IGT--HAG-VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW-IGTFGGG-VGIYTPDMQLVR-KFNQYEGFCS 538 (781)
T ss_dssp EEE--TTE-EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE-EEESSSC-EEEECTTCCEEE-EECTTTTCSC
T ss_pred EEE--CCc-eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE-EEEcCCC-EEEEeCCCCeEE-EccCCCCCCC
Confidence 332 344 5555544433332221 1 3568899998888855 4555445 888997666533 3331 1123
Q ss_pred cceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 224 AEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 224 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
..|.++...++|++.++.. +|.|..||.++++
T Consensus 539 ~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 539 NTINQIYRSSKGQMWLATG-EGLVCFPSARNFD 570 (781)
T ss_dssp SCEEEEEECTTSCEEEEET-TEEEEESCTTTCC
T ss_pred CeeEEEEECCCCCEEEEEC-CCceEEECCCCCc
Confidence 5789999999998766544 6654888876654
No 283
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.34 E-value=0.00066 Score=54.86 Aligned_cols=230 Identities=13% Similarity=0.184 Sum_probs=144.4
Q ss_pred EEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC-ccEE
Q 018248 11 HLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE-NRYL 89 (359)
Q Consensus 11 ~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~-~~~~ 89 (359)
+.-.+|..+.+|.-....++|||+++.+......+ ..+|..-.|. +++.+++++ +..|.-|++.. ..+.
T Consensus 71 sAIMnP~~~ViALrag~~LQiFnletK~klks~~~----~e~VvfWkWi-s~~~L~lVT-----~taVyHWs~~~~s~P~ 140 (365)
T 2xzh_A 71 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM----TDDVTFWKWI-SLNTVALVT-----DNAVYHWSMEGESQPV 140 (365)
T ss_dssp EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEEC----SSCEEEEEEC-SSSEEEEEE-----SSEEEEEESSTTCCCE
T ss_pred eeeeCCCccEEEEecCCeEEEechHHhhhhcceec----CCccEEEEec-CCCeEEEEc-----CCcEEEEcccCCCCCc
Confidence 44568888888777778899999998776665565 4566655554 567888887 58999999864 3455
Q ss_pred eeec-c----CcceeEEEEecceeEEE----------ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCC---ccEE
Q 018248 90 GELS-F----RSEVKNVRLRRDRIVVV----------LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAG---PMVM 151 (359)
Q Consensus 90 ~~~~-~----~~~v~~~~~~~~~~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l 151 (359)
+.+. | ..+|..-..+++.++++ ..|.+.+|..+. +.-+.+++|.... ..+-.++. ..++
T Consensus 141 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F--~~~~~~g~~~~~~lf 217 (365)
T 2xzh_A 141 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASF--AQFKMEGNAEESTLF 217 (365)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEE--EEECCTTCSSCEEEE
T ss_pred eeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeee--EEEecCCCCCCceEE
Confidence 5554 2 35677777888888776 347888998754 3445566654422 22222221 1112
Q ss_pred --EecCCCCeeEEEEecCCe----------eeEEeec---ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEE
Q 018248 152 --ACPGLLKGQVRVEDYGTK----------KSKYITA---HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQE 216 (359)
Q Consensus 152 --~~~g~~d~~v~~~~~~~~----------~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~ 216 (359)
+.-+...+.+++-..... .+..+.. ..+-.-++..|+.-..+..-+.-|. |.+||++++.++..
T Consensus 218 ~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~-ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 218 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYM 296 (365)
T ss_dssp EEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEEE
T ss_pred EEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcE-EEEEEcccCcEEEE
Confidence 221122356777443211 1111111 1223456777777778888889998 99999999999987
Q ss_pred eecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 217 MRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 217 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
-+- ....|...+-+.+..=++.....|.|.--.++...
T Consensus 297 nrI--S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 297 NRI--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEC--CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred ecc--CCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 665 33466655555454455556688877776666544
No 284
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.34 E-value=0.0016 Score=59.01 Aligned_cols=227 Identities=6% Similarity=-0.051 Sum_probs=140.4
Q ss_pred CEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cCcc
Q 018248 19 GCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FRSE 97 (359)
Q Consensus 19 ~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~ 97 (359)
.+|+.+..+.|+..++++........+ ..-.....+++.+..+.+.++.. .++.|..+++........+. ....
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~--~~~~~~~~l~~d~~~~~lywtD~---~~~~I~r~~~~g~~~~~v~~~g~~~ 81 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNNNVAIPL--TGVKEASALDFDVTDNRIYWTDI---SLKTISRAFMNGSALEHVVEFGLDY 81 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTCEEECCC--CSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCSC
T ss_pred cEEEEEeCCcEEEEECCCCCcceEEEc--CCCCceEEEEEECCCCEEEEEEC---CCCeEEEEECCCCCcEEEEeCCCCC
Confidence 466666778899999986544322222 12345667788877777777664 35899999976554333333 2245
Q ss_pred eeEEEEecce-eEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEE
Q 018248 98 VKNVRLRRDR-IVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKY 173 (359)
Q Consensus 98 v~~~~~~~~~-~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~ 173 (359)
...+++.+.+ ++.. ..+.|.+.++........+.........+++.|....++.+-.| ..+.|.....++.....
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~dG~~~~~ 160 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSERTT 160 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSCEE
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCC-CCCEEEEEeCCCCceEE
Confidence 7788888653 3333 56789999985433222222223334678888876665554322 25567777777766655
Q ss_pred eecccccccEEEEccCCcEEEEEeC-CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEc
Q 018248 174 ITAHASRIASIAMTLDGRFVATASS-KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGL 252 (359)
Q Consensus 174 ~~~~~~~i~~~~~s~~~~~l~~~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 252 (359)
+...-.....+++++++..|..+.. .+. |..+|+..... ..+.. .......+++.. +.++++-...+.|...|.
T Consensus 161 l~~~~~~P~GlalD~~~~~LY~aD~~~~~-I~~~d~dG~~~-~v~~~--~l~~P~glav~~-~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 161 LVPNVGRANGLTIDYAKRRLYWTDLDTNL-IESSNMLGLNR-EVIAD--DLPHPFGLTQYQ-DYIYWTDWSRRSIERANK 235 (628)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSC-EEEEE--CCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred EECCCCCcceEEEccccCEEEEEECCCCE-EEEEcCCCCce-EEeec--cCCCceEEEEEC-CEEEEecCCCCEEEEEEC
Confidence 5545566789999998777776654 445 99999865433 23332 223456788764 445555555777888886
Q ss_pred cCCC
Q 018248 253 KVDS 256 (359)
Q Consensus 253 ~~~~ 256 (359)
.+++
T Consensus 236 ~tg~ 239 (628)
T 4a0p_A 236 TSGQ 239 (628)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 6554
No 285
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.32 E-value=0.00064 Score=53.65 Aligned_cols=191 Identities=8% Similarity=0.077 Sum_probs=112.3
Q ss_pred CceEEEEEccCCCEEEEec--CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 7 ITIHHLALNQDHGCFATGT--ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
..+..++|+|++..|.+.. ++.|...|.+ ++......+. + ......+++..++ .++++.. .++.+.++++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~-g-~~D~EGIa~~~~g-~~~vs~E---~~~~l~~~~v~ 99 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLD-F-VKDLETIEYIGDN-QFVISDE---RDYAIYVISLT 99 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECS-S-CSSEEEEEECSTT-EEEEEET---TTTEEEEEEEC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecC-C-CCChHHeEEeCCC-EEEEEEC---CCCcEEEEEcC
Confidence 4699999999877665544 6777777777 4444333332 2 2455566665444 3444443 35788888876
Q ss_pred CccE---Eeeec-------cCcceeEEEEecceeEE-E--ecCeEEEEEcc---cceeeeeEec-------cCCCceeee
Q 018248 85 ENRY---LGELS-------FRSEVKNVRLRRDRIVV-V--LNQKVYVYNFT---DLKLVDQIET-------VVNPTGLCD 141 (359)
Q Consensus 85 ~~~~---~~~~~-------~~~~v~~~~~~~~~~~~-~--~d~~i~i~d~~---~~~~~~~~~~-------~~~~~~~~~ 141 (359)
.... +.... .......++++|.+..+ + ......+|.+. ..+.+..+.. .......++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5432 22221 23445899999987333 3 33333444442 1111222211 223456788
Q ss_pred eecCCCccEEEecCCCCeeEEEEecCCeeeEEeeccc---------ccccEEEEccCCcEEEEEeCCCCeEEEEEc
Q 018248 142 VSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAHA---------SRIASIAMTLDGRFVATASSKGTLIRVFNT 208 (359)
Q Consensus 142 ~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~---------~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~ 208 (359)
+.|....+++.+ ..+..+...+.+++.+..+.-.. .....|+|.++|++. ..++... ++.|.-
T Consensus 180 ~dp~tg~lliLS--~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ly-IvsE~n~-~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLS--HESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIY-IVSEPNR-FYRFTP 251 (255)
T ss_dssp EETTTTEEEEEE--TTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEE-EEETTTE-EEEEEC
T ss_pred EcCCCCeEEEEE--CCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEE-EEcCCce-EEEEEe
Confidence 999877766665 24566766888887665553221 256899999999844 4466665 777753
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.30 E-value=0.00095 Score=54.99 Aligned_cols=201 Identities=8% Similarity=-0.034 Sum_probs=119.3
Q ss_pred ceEEEEEccCCCEEEEec--CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 8 TIHHLALNQDHGCFATGT--ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
.+..++|++.+..|.... .+.|..++.+........ +. ..-.....+++.+....+.++.. ..+.|.++++..
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~-~~-~~l~~p~glavd~~~g~ly~~d~---~~~~I~~~~~dG 110 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV-VV-SGLLSPDGLACDWLGEKLYWTDS---ETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE-EE-ECCSCCCEEEEETTTTEEEEEET---TTTEEEEEETTS
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE-Ec-CCCCCccEEEEEcCCCeEEEEEC---CCCEEEEEECCC
Confidence 456889998666655544 778888888765321111 10 01234456777766666666554 348899999765
Q ss_pred ccEEeee-ccCcceeEEEEecceeEE-E-e---cCeEEEEEcccceeeeeE-eccCCCceeeeeecCCCccEEEecCCCC
Q 018248 86 NRYLGEL-SFRSEVKNVRLRRDRIVV-V-L---NQKVYVYNFTDLKLVDQI-ETVVNPTGLCDVSQNAGPMVMACPGLLK 158 (359)
Q Consensus 86 ~~~~~~~-~~~~~v~~~~~~~~~~~~-~-~---d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~d 158 (359)
......+ ........+++.|.+..+ . . .+.|...++. ++....+ ...-.....+++++++..++++- ...
T Consensus 111 ~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD--~~~ 187 (318)
T 3sov_A 111 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWAD--AKL 187 (318)
T ss_dssp CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEE--TTT
T ss_pred CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECCCCCccEEEEeccCCEEEEEE--CCC
Confidence 4332222 234567899999864433 3 2 4678888874 3332232 22223345688998887766654 346
Q ss_pred eeEEEEecCCeeeEEeec-ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEee
Q 018248 159 GQVRVEDYGTKKSKYITA-HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMR 218 (359)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~ 218 (359)
+.|...+.++...+.+.. .......+++.. +.++.+-...+. |..++..+++....+.
T Consensus 188 ~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~-V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 188 NFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHS-ILACNKYTGEGLREIH 246 (318)
T ss_dssp TEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCEEEE
T ss_pred CEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCe-EEEEECCCCCceEEEe
Confidence 788887777755554432 334456777753 334444445566 8888877777655554
No 287
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.27 E-value=0.00032 Score=64.26 Aligned_cols=229 Identities=9% Similarity=0.037 Sum_probs=117.1
Q ss_pred eEEEEEccCCCEEEEec--CCceEEEEcCCCcceeeeecccCCCCce-eEEEEeccCCEEEEEecCCC--CCCeEEEEEC
Q 018248 9 IHHLALNQDHGCFATGT--ETGFRVYLSDPYKPIMRRDFDRNPRGGT-QLVSMLFRSNIICLVNSGPH--QSNKVMIWDD 83 (359)
Q Consensus 9 v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~~~~~~~~--~d~~i~iwd~ 83 (359)
..++++..+|+++++|+ +..+.+||..+.+-.....+. .... ..+...+++...++.+.... .-..+.+||.
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~---~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQ---VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCS---SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCC---ccccccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence 34577889999999998 567999998865433222222 2222 22333335554444331110 1257999999
Q ss_pred CCccEEeee-----c-----------cCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeEeccCC---------C
Q 018248 84 HENRYLGEL-----S-----------FRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETVVN---------P 136 (359)
Q Consensus 84 ~~~~~~~~~-----~-----------~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~---------~ 136 (359)
.+++....- . ....+..+. -.++..+. ....+..||..+............ .
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~G-g~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~ 400 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFG-WKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC 400 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEE-CGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT
T ss_pred CCCcceeCCCccccccccccccceeecCCceEEEE-CCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC
Confidence 887644320 0 001111111 12333322 345788899876553332221111 1
Q ss_pred ceeeeeecCCCccEEEecCCC--C-----e---eEEEEecCCeeeEEee---ccccc-ccEEEEccCCcEEEEEeCC---
Q 018248 137 TGLCDVSQNAGPMVMACPGLL--K-----G---QVRVEDYGTKKSKYIT---AHASR-IASIAMTLDGRFVATASSK--- 199 (359)
Q Consensus 137 ~~~~~~~~~~~~~~l~~~g~~--d-----~---~v~~~~~~~~~~~~~~---~~~~~-i~~~~~s~~~~~l~~~~~d--- 199 (359)
...+.+...+. .++++.|.. + . .+.+++.....-..+. .+... -.+++..|++++++.|+.+
T Consensus 401 ~~av~~~~~~~-~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 401 GNAVMYDAVKG-KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI 479 (656)
T ss_dssp CEEEEEETTTT-EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC
T ss_pred CceEeccCCCC-eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc
Confidence 12223323333 344553421 1 1 4555555543333322 12222 3455677899999998854
Q ss_pred --------CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcC
Q 018248 200 --------GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSD 243 (359)
Q Consensus 200 --------g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 243 (359)
.. +.+||..+.+-...-.............+.|||++++.|+.
T Consensus 480 ~~~~~~~~~~-v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 480 PFEDSTPVFT-PEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TTCCCSBCCC-CEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CcCCCCcccc-eEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 45 89999887654332111111222334556799999999985
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.27 E-value=0.0011 Score=54.48 Aligned_cols=175 Identities=15% Similarity=0.226 Sum_probs=111.4
Q ss_pred CCCeEEEEECCCccEEeeeccCcceeEEEEeccee-------E-EE---e--cCeEEEEEcc-cceeeeeEe-------c
Q 018248 74 QSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRI-------V-VV---L--NQKVYVYNFT-DLKLVDQIE-------T 132 (359)
Q Consensus 74 ~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-------~-~~---~--d~~i~i~d~~-~~~~~~~~~-------~ 132 (359)
..+-+.+||+ +|+.++.+.. +.++.+..-|+-. + ++ . +++|.+|++. ....+..+. .
T Consensus 48 k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t 125 (355)
T 3amr_A 48 KKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIAT 125 (355)
T ss_dssp TTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEEC
T ss_pred CCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCC
Confidence 4589999998 8999988864 5677777666321 2 22 4 6899999872 222344441 1
Q ss_pred cCCCceeeee--ecCCCccEEEecCCCCeeEEEEecC--------CeeeEEeecccccccEEEEccCCcEEEEEeCCCCe
Q 018248 133 VVNPTGLCDV--SQNAGPMVMACPGLLKGQVRVEDYG--------TKKSKYITAHASRIASIAMTLDGRFVATASSKGTL 202 (359)
Q Consensus 133 ~~~~~~~~~~--~~~~~~~~l~~~g~~d~~v~~~~~~--------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~ 202 (359)
......-+|+ ++.....++.. ...+|.+..|... .+.++.+.. .+.+..+...+....|+.+-++..
T Consensus 126 ~~~~pyGlcly~~~~~g~~yafV-~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~G- 202 (355)
T 3amr_A 126 AINEVYGFTLYHSQKTGKYYAMV-TGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEA- 202 (355)
T ss_dssp CCSSCCCEEEEECTTTCCEEEEE-ECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTE-
T ss_pred CCCCeeEEEEEecCCCCcEEEEE-ECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccce-
Confidence 1123344565 55444444444 3456877775542 244555553 457889999998889999999977
Q ss_pred EEEEEcC-----CCcEEEEeecCCCCcceEEEEe--cCCCC-EEEEEc-CCCcEEEEEcc
Q 018248 203 IRVFNTM-----DGSLLQEMRRGAERAEIYSLAF--SSNAQ-WLAASS-DKGTVHVFGLK 253 (359)
Q Consensus 203 i~iwd~~-----~~~~~~~~~~~~~~~~i~~~~~--s~~~~-~l~~~~-~dg~i~iw~~~ 253 (359)
|..++.+ +++.+..+..+.-...+..|++ .++++ +|++++ .+.+..+||.+
T Consensus 203 Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 203 IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 8888855 3456655543323346888888 45665 555555 67789999997
No 289
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.22 E-value=0.00013 Score=67.83 Aligned_cols=198 Identities=9% Similarity=0.055 Sum_probs=109.5
Q ss_pred ceeEEEEe-ccCCEEEEEecCCC-CCCeEEEEECCCc-cEEeeeccCcceeEEEEecceeEEE---ec-----CeEEEEE
Q 018248 52 GTQLVSML-FRSNIICLVNSGPH-QSNKVMIWDDHEN-RYLGELSFRSEVKNVRLRRDRIVVV---LN-----QKVYVYN 120 (359)
Q Consensus 52 ~v~~~~~~-~~~~~~~~~~~~~~-~d~~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~---~d-----~~i~i~d 120 (359)
.+...+++ |+++.++++..... ....|+++|+.++ +.+.. ........+.|+||++.++ .+ ..|++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 56778999 99998887764210 2246999999998 63221 1122245789999986665 32 3688888
Q ss_pred ccccee--eeeEecc-CCCceeeeeecCCCccEEEecCCCCeeEEEEecCCe--ee--EEee-cccccccEEEEccCCcE
Q 018248 121 FTDLKL--VDQIETV-VNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK--KS--KYIT-AHASRIASIAMTLDGRF 192 (359)
Q Consensus 121 ~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~--~~--~~~~-~~~~~i~~~~~s~~~~~ 192 (359)
+.+++. ...+... ......+.++|+++.+++.+.......|++.+.... .. +.+. .......++.|+.++.+
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 866532 2222222 222345689999987666553334556777666542 22 3333 33344555555444444
Q ss_pred EEEEeCC--C--CeEEEEEcCCCcEEEE-eecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEc
Q 018248 193 VATASSK--G--TLIRVFNTMDGSLLQE-MRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGL 252 (359)
Q Consensus 193 l~~~~~d--g--~~i~iwd~~~~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 252 (359)
++....+ + . |..+|+.++..... +..+.....+..+.+. .+.++++...++..+||-+
T Consensus 334 ~~~t~~~~a~~~~-L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 334 VILTNEGGAVNHK-LLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp EEEECTTTCTTCE-EEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEE
T ss_pred EEEeCCCCCCCcE-EEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEE
Confidence 4444443 2 4 66677654222112 2221122245666665 3345566667776554433
No 290
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.19 E-value=0.0021 Score=54.16 Aligned_cols=230 Identities=13% Similarity=0.184 Sum_probs=146.2
Q ss_pred EEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC-ccEE
Q 018248 11 HLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE-NRYL 89 (359)
Q Consensus 11 ~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~-~~~~ 89 (359)
+.-.+|..+.+|.=....+.|||+++.+......+ ..+|..-.|. +++.+++++ +..|.-|++.. ..+.
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnle~K~klks~~~----~e~VvfWkWi-s~~~l~lVT-----~taVyHWsi~~~s~P~ 139 (494)
T 1bpo_A 70 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM----TDDVTFWKWI-SLNTVALVT-----DNAVYHWSMEGESQPV 139 (494)
T ss_dssp EEEECSSSSCEEEEETTEEEEEETTTTEEEEEEEC----SSCCCEEEEE-ETTEEEEEC-----SSEEEEEESSSSCCCE
T ss_pred eeeeCCCCcEEEEecCCeEEEEchHHhhhhcceec----CCCceEEEec-CCCeEEEEc-----CCeeEEecccCCCCch
Confidence 45567888888777788899999998777666665 4566655554 567888887 58999999864 3455
Q ss_pred eeec-c----CcceeEEEEecceeEEE----------ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCC----c-c
Q 018248 90 GELS-F----RSEVKNVRLRRDRIVVV----------LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAG----P-M 149 (359)
Q Consensus 90 ~~~~-~----~~~v~~~~~~~~~~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~ 149 (359)
..+. | ..+|..-..+++.++++ ..|.+.+|..+. +.-+.+++|..... .+..++. . +
T Consensus 140 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~--~~~~~g~~~~~~lf 216 (494)
T 1bpo_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFA--QFKMEGNAEESTLF 216 (494)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEE--EEECTTCSSEEEEE
T ss_pred hheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeE--EEecCCCCCCceEE
Confidence 5554 2 35677778888888776 357888998744 34455666544222 2222221 1 1
Q ss_pred EEEecCCCCeeEEEEecCCe----------eeEEeec---ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEE
Q 018248 150 VMACPGLLKGQVRVEDYGTK----------KSKYITA---HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQE 216 (359)
Q Consensus 150 ~l~~~g~~d~~v~~~~~~~~----------~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~ 216 (359)
.++.-....+.+++-..... .+..+.. ..+-..++..++.-..+...+.-|. |.+||+.++.++..
T Consensus 217 ~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~-i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYM 295 (494)
T ss_dssp EEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEEE
T ss_pred EEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCce-EEEEecccceeeee
Confidence 12221112356777443211 1111111 1233457778887778888889998 99999999999887
Q ss_pred eecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 217 MRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 217 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
-+- ....|...+.+....=++.....|.|.--.++...
T Consensus 296 nrI--s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 296 NRI--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EEC--CSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred ecc--cCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 665 34566666665555556666788877777666544
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.18 E-value=2.4e-05 Score=71.91 Aligned_cols=226 Identities=10% Similarity=-0.032 Sum_probs=123.4
Q ss_pred EEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC----ccEEeeec-cC
Q 018248 21 FATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE----NRYLGELS-FR 95 (359)
Q Consensus 21 l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~----~~~~~~~~-~~ 95 (359)
|+.+..+.|+..++++.+... .+. ....+..+++.+..+.++++.. ..+.|+.+++.. ......+. ..
T Consensus 380 ll~~~~~~I~~id~~~~~~~~--~~~--~~~~p~gla~d~~~~~Ly~sD~---~~~~I~~~~~~g~~~~~~~~~~i~~~~ 452 (699)
T 1n7d_A 380 LFFTNRHEVRKMTLDRSEYTS--LIP--NLRNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDI 452 (699)
T ss_dssp BCCCCTTC-CEECTTSCCEEC--CSC--CCTTCCCCEEETTTTEEEECCT---TTTSBEEEESCCCCC-CCCCCBCCSCC
T ss_pred EEecCccceEEEeCCCCccee--eec--cCcceEEEccccccCeEEEEec---CCCeEEEEecCCCCCCcceEEEEeCCC
Confidence 444445677777777543321 111 1234456677776777766654 347899998765 22222222 12
Q ss_pred cceeEEEEec-ceeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeee
Q 018248 96 SEVKNVRLRR-DRIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKS 171 (359)
Q Consensus 96 ~~v~~~~~~~-~~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~ 171 (359)
.....+++.+ .+.+++ ..+.|.++++........+.........+++.|.+..++++-.+ ..+.|.+...++...
T Consensus 453 ~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~-~~~~I~~~~~dG~~~ 531 (699)
T 1n7d_A 453 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDI 531 (699)
T ss_dssp --CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS-SSCCEEBCCSSSCCC
T ss_pred CCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC-CCCeEEEEeCCCCCe
Confidence 3456778774 344444 56789999985443333333222334567888877665554322 236677666665444
Q ss_pred EEee-cccccccEEEEccCCcEEEEEe-CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEE
Q 018248 172 KYIT-AHASRIASIAMTLDGRFVATAS-SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHV 249 (359)
Q Consensus 172 ~~~~-~~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 249 (359)
..+. ..-...+.|+|+|++..|+.+. ..+. |..+++........+...........|++..+ .++++....+.|..
T Consensus 532 ~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~ 609 (699)
T 1n7d_A 532 YSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFS 609 (699)
T ss_dssp CEESCSSCSSCCCEEECTTTCCEEEEETTTTE-EEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEE
T ss_pred eEEEeCCCCCccEEEEeccCCEEEEEecCCCe-EEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEE
Confidence 3332 2234567899999866555554 4556 99999854333222221111123445666443 45555556678999
Q ss_pred EEccCCC
Q 018248 250 FGLKVDS 256 (359)
Q Consensus 250 w~~~~~~ 256 (359)
++..+++
T Consensus 610 ~d~~~G~ 616 (699)
T 1n7d_A 610 ANRLTGS 616 (699)
T ss_dssp EETTTEE
T ss_pred EEccCCC
Confidence 8876554
No 292
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.15 E-value=0.00051 Score=59.31 Aligned_cols=153 Identities=10% Similarity=0.107 Sum_probs=91.7
Q ss_pred ceeEEEEecc---eeEEE--ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCC---CCeeEEEEecCC
Q 018248 97 EVKNVRLRRD---RIVVV--LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGL---LKGQVRVEDYGT 168 (359)
Q Consensus 97 ~v~~~~~~~~---~~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~---~d~~v~~~~~~~ 168 (359)
....++++|+ +.+++ ..+.|+.+|..+++...... .......++++++++ ++++-.+. ..+.+.+ ....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~-~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLF-TRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEE-CGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEE-ECCC
Confidence 3568999984 66555 33799999987776554433 334456788888887 55554221 1122222 2221
Q ss_pred eee--EEeecccccccEEEEcc-CCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEE-EEEcCC
Q 018248 169 KKS--KYITAHASRIASIAMTL-DGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWL-AASSDK 244 (359)
Q Consensus 169 ~~~--~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d 244 (359)
... ..+. .-.....++++| +|.+.++-..++. |+.+|..++.....+...........++|+|++++| ++-...
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~-V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAM-ISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSE-EEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCE-EEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 111 1222 234557789999 6766555556677 999998777763333211122234579999999955 444556
Q ss_pred CcEEEEEccC
Q 018248 245 GTVHVFGLKV 254 (359)
Q Consensus 245 g~i~iw~~~~ 254 (359)
+.|+.+++..
T Consensus 295 ~~I~~~~~d~ 304 (433)
T 4hw6_A 295 HCIYRVDYNR 304 (433)
T ss_dssp TEEEEEEBCT
T ss_pred CEEEEEeCCC
Confidence 7888888764
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.14 E-value=0.0048 Score=57.33 Aligned_cols=203 Identities=9% Similarity=-0.035 Sum_probs=119.6
Q ss_pred CceEEEEEccCCCEEEEec--CCceEEEEcCCCcc--eeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 7 ITIHHLALNQDHGCFATGT--ETGFRVYLSDPYKP--IMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
..+..|+|++....|.... .+.|+.++++.... .....+. ........+++.+.++.++++.. ..+.|.+.+
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~-~~l~~P~GLAvD~~~~~LY~tD~---~~~~I~v~~ 499 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDS---VLGTVSVAD 499 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-SSCSCCCEEEEETTTTEEEEEET---TTTEEEEEE
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe-cCCCCcceeeeeecCCcEEEEec---CCCeEEEEe
Confidence 4567899998666555444 67788888874211 1111111 12344566788877777776654 358999999
Q ss_pred CCCccEEeeec-cCcceeEEEEecce-eEEEe----cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCC
Q 018248 83 DHENRYLGELS-FRSEVKNVRLRRDR-IVVVL----NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGL 156 (359)
Q Consensus 83 ~~~~~~~~~~~-~~~~v~~~~~~~~~-~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 156 (359)
+........+. .-.....|++.|.+ .+++. .+.|...++........+.........+++.+....+|++- .
T Consensus 500 ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD--~ 577 (791)
T 3m0c_C 500 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD--S 577 (791)
T ss_dssp TTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEE--T
T ss_pred CCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEe--C
Confidence 76554333333 33568899999864 44442 26788888854433333332323456688888887766664 2
Q ss_pred CCeeEEEEecCCeeeEEeecc---cccccEEEEccCCcEEEEEe-CCCCeEEEEEcCCCcEEEEee
Q 018248 157 LKGQVRVEDYGTKKSKYITAH---ASRIASIAMTLDGRFVATAS-SKGTLIRVFNTMDGSLLQEMR 218 (359)
Q Consensus 157 ~d~~v~~~~~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~~~~~~~~~ 218 (359)
..+.|...+.++...+.+... -.....|++ .+..|+.+. ..+. |...|..+|+.+..+.
T Consensus 578 ~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~-I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 578 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEA-IFSANRLTGSDVNLLA 640 (791)
T ss_dssp TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTE-EEEEETTTCCCCEEEE
T ss_pred CCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCE-EEEEeCCCCcceEEee
Confidence 456788877777655554322 122345555 334555554 4455 8888877776655554
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.14 E-value=0.0033 Score=54.64 Aligned_cols=244 Identities=7% Similarity=0.022 Sum_probs=136.3
Q ss_pred ceEEEEEcc-CCCEEEEec--CCceEEEEcCCCcceeeeecccCCCCceeEEEE-------eccCCEEEEEecCCC---C
Q 018248 8 TIHHLALNQ-DHGCFATGT--ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSM-------LFRSNIICLVNSGPH---Q 74 (359)
Q Consensus 8 ~v~~~~~s~-~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~~~~~~~~~~---~ 74 (359)
....|+|+| +...|.++. .+.|++.|++............+.......+++ ..+++.++++..... .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 455554444 466888888765444322221011234677788 778876666553210 0
Q ss_pred CCeEEEEECCC-ccEE-----eeeccCcceeEEEEecc-eeEEE---ecCeEEEEEcc-------ccee-----------
Q 018248 75 SNKVMIWDDHE-NRYL-----GELSFRSEVKNVRLRRD-RIVVV---LNQKVYVYNFT-------DLKL----------- 126 (359)
Q Consensus 75 d~~i~iwd~~~-~~~~-----~~~~~~~~v~~~~~~~~-~~~~~---~d~~i~i~d~~-------~~~~----------- 126 (359)
...|.+++... ++.. ..+..-.....++++|+ +.+++ .++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 12366665333 2221 12221234567888994 55444 77889999987 4443
Q ss_pred eee-Eecc-CCCceeeeeecCCCccEEEecCCCCeeEEEEecCC--eee---EEeecc---c------------cccc-E
Q 018248 127 VDQ-IETV-VNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGT--KKS---KYITAH---A------------SRIA-S 183 (359)
Q Consensus 127 ~~~-~~~~-~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~--~~~---~~~~~~---~------------~~i~-~ 183 (359)
... +... ......++++|+++.++++-+ ..+.|+..+.++ ..+ ..+-+. . .... .
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~--~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVI--NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeC--CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 112 2221 223457899999986666642 455666643332 211 222221 0 1123 4
Q ss_pred EEEc-------cCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCC----------------------CCcceEEEEecCC
Q 018248 184 IAMT-------LDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGA----------------------ERAEIYSLAFSSN 234 (359)
Q Consensus 184 ~~~s-------~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~----------------------~~~~i~~~~~s~~ 234 (359)
++.. ++|.+.++=..... |+.++ .+|. +.++.+.. .-.....|+++++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~r-Ir~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFC-VRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTE-EEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEccccccccCCCeEEEEECCCCE-EEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 4444 45665555555666 99998 5664 33443210 0124678999997
Q ss_pred -CCEEEEEcCCCcEEEEEccCCC
Q 018248 235 -AQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 235 -~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
|.++++=.....|+.++++...
T Consensus 455 ~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp TTEEEEEETTTTEEEEEEECCCC
T ss_pred CCEEEEEeCCCCEEEEEECCCCc
Confidence 7777776777889999998765
No 295
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.14 E-value=0.00057 Score=57.40 Aligned_cols=155 Identities=12% Similarity=0.114 Sum_probs=97.8
Q ss_pred eeecCCCccEEEecCCCCeeEEEEecC-CeeeEEeecc----cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc---
Q 018248 141 DVSQNAGPMVMACPGLLKGQVRVEDYG-TKKSKYITAH----ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGS--- 212 (359)
Q Consensus 141 ~~~~~~~~~~l~~~g~~d~~v~~~~~~-~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~--- 212 (359)
..+.++..++++. ++.||.-... ....+.+... -..|..+..+|+|++||..+..+ |.|-.+..+.
T Consensus 27 ~~~~n~t~i~~a~----~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~--V~Vv~LP~~~~~~ 100 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ----DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNE--IFVMEVPWGYSNV 100 (452)
T ss_dssp EEETTTTEEEEEE----TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSE--EEEEECCTTCSCC
T ss_pred EEEcCCCEEEEEE----CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCe--EEEEEecCccccC
Confidence 3445555555543 5688874433 3445555433 23688999999999999987664 8888887321
Q ss_pred ---------EEEEeecCC----CCcceEEEEecCC---CCEEEEEcCCCcEEEEEccCCCCCCCCCccccCCCCCccCCC
Q 018248 213 ---------LLQEMRRGA----ERAEIYSLAFSSN---AQWLAASSDKGTVHVFGLKVDSGSPGTSKLHSASEPNLSSKN 276 (359)
Q Consensus 213 ---------~~~~~~~~~----~~~~i~~~~~s~~---~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (359)
..+.+..+. ...+|..+.|+|- +..|++-..|+.|++||+......+.
T Consensus 101 ~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~---------------- 164 (452)
T 3pbp_A 101 EDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI---------------- 164 (452)
T ss_dssp CCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE----------------
T ss_pred cccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc----------------
Confidence 122333321 2467999999995 45899999999999999998443320
Q ss_pred CCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEe--cCCeEEE
Q 018248 277 SSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVG--LDGSYYK 333 (359)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~v 333 (359)
.+. . ....|.. ......+.+++|++++-.|++.+ ..|.||-
T Consensus 165 -----~L~---k-~~~~fg~-------d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 165 -----VLN---K-PNNSFGL-------DARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp -----EES---C-CCSEEES-------CSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred -----chh---c-cccccCC-------CcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 000 0 0001110 11124678999999888888866 7787763
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.11 E-value=4.8e-05 Score=69.91 Aligned_cols=202 Identities=10% Similarity=-0.042 Sum_probs=118.5
Q ss_pred CceEEEEEccCCCEEEEec--CCceEEEEcCC----CcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEE
Q 018248 7 ITIHHLALNQDHGCFATGT--ETGFRVYLSDP----YKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMI 80 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~i 80 (359)
..+..|+|++.+..|..+. .+.|+.++++. .... ..+. ........+++.+....++++.. ..+.|.+
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~--~~i~-~~~~~P~glavD~~~g~LY~tD~---~~~~I~v 479 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVIS-RDIQAPDGLAVDWIHSNIYWTDS---VLGTVSV 479 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCC--CBCC-SCC--CCCEECCCSSSBCEECCT---TTSCEEE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceE--EEEe-CCCCCcceEEEEeeCCcEEEEec---cCCeEEE
Confidence 3456889999877777665 67899999875 1111 1111 01122344666655555555443 3588999
Q ss_pred EECCCccEEeeec-cCcceeEEEEeccee-EEEe----cCeEEEEEcccceeeeeE-eccCCCceeeeeecCCCccEEEe
Q 018248 81 WDDHENRYLGELS-FRSEVKNVRLRRDRI-VVVL----NQKVYVYNFTDLKLVDQI-ETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 81 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~~~~----d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
+++........+. .......+++.|.+. +++. .+.|.++++.. .....+ .........+++++++..+|++-
T Consensus 480 ~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~~~~~l~~~~l~~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp EBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-CCCCEESCSSCSSCCCEEECTTTCCEEEEE
T ss_pred EecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-CCeeEEEeCCCCCccEEEEeccCCEEEEEe
Confidence 9976554333333 234567889998644 3332 26788877643 222222 12222345688998888777664
Q ss_pred cCCCCeeEEEEecCCeeeEEeecc---cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 154 PGLLKGQVRVEDYGTKKSKYITAH---ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 154 ~g~~d~~v~~~~~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
+ ..+.|...+.++...+.+... ......|++..+ .++++....+. |..++..+++.+..+..
T Consensus 559 ~--~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~-V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 559 S--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA-IFSANRLTGSDVNLLAE 623 (699)
T ss_dssp T--TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC-EEEEETTTEEEEECCCT
T ss_pred c--CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe-EEEEEccCCCceEEeec
Confidence 3 466788877776555544321 233455666544 34444455667 99999888887777654
No 297
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.05 E-value=0.0036 Score=51.78 Aligned_cols=234 Identities=12% Similarity=0.099 Sum_probs=120.8
Q ss_pred CCCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeee-cc-cCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEE
Q 018248 5 DPITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRD-FD-RNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWD 82 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~-~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd 82 (359)
....+.+|.|.+++..+++|..+.| +...+.++ ..... .. ......+..+.+. ++.+.+++ .++.|.. .
T Consensus 34 ~~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~-tW~~~~~~~~~~~~~~~~i~~~--~~~~~~~g----~~g~i~~-S 104 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWLVGVNATL-METRDGGQ-TWEPRTLVLDHSDYRFNSVSFQ--GNEGWIVG----EPPIMLH-T 104 (327)
T ss_dssp CSSCEEEEEESSSSCEEEEETTTEE-EEESSTTS-SCEECCCCCSCCCCEEEEEEEE--TTEEEEEE----ETTEEEE-E
T ss_pred CCCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCC-CCeECCCCCCCCCccEEEEEec--CCeEEEEE----CCCeEEE-E
Confidence 3567999999988888887777654 33333332 22221 11 0112345555554 45555454 3465544 2
Q ss_pred CCCccEEeeec----cCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeEe-ccCCCceeeeeecCCCccEEEecC
Q 018248 83 DHENRYLGELS----FRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIE-TVVNPTGLCDVSQNAGPMVMACPG 155 (359)
Q Consensus 83 ~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g 155 (359)
...|+.-.... ++..+..+.+.+++..++ .++.|+.- ...++.-..+. .....+..+.+.+++. ++++ +
T Consensus 105 ~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~--~~~~-g 180 (327)
T 2xbg_A 105 TDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGE--YVAV-S 180 (327)
T ss_dssp SSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSC--EEEE-E
T ss_pred CCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCc--EEEE-E
Confidence 23343333222 234577787776666555 45544321 12233222222 2233455566666543 3544 3
Q ss_pred CCCeeEEE-EecCCeeeEEe-ecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecC--CCCcceEEEEe
Q 018248 156 LLKGQVRV-EDYGTKKSKYI-TAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRG--AERAEIYSLAF 231 (359)
Q Consensus 156 ~~d~~v~~-~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~ 231 (359)
..|.+.. ++..+..-..+ ......+..+.+.+++++++ ++.+|. +++.+...++.-..+... .....+.++++
T Consensus 181 -~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~-~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~ 257 (327)
T 2xbg_A 181 -SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGK-IAFSDPDNSENWGELLSPLRRNSVGFLDLAY 257 (327)
T ss_dssp -TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTE-EEEEETTEEEEECCCBCTTSSCCSCEEEEEE
T ss_pred -CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEE-EeCCce-EEEecCCCCCeeEeccCCcccCCcceEEEEe
Confidence 3555665 44323322222 23455788899999987664 456776 776642224433333221 11235889999
Q ss_pred cCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 232 SSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 232 s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
.+++.+++++. +|.| ++..+.++
T Consensus 258 ~~~~~~~~~g~-~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 258 RTPNEVWLAGG-AGAL-LCSQDGGQ 280 (327)
T ss_dssp SSSSCEEEEES-TTCE-EEESSTTS
T ss_pred cCCCEEEEEeC-CCeE-EEeCCCCc
Confidence 98888777654 6655 34444443
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.01 E-value=0.0081 Score=54.43 Aligned_cols=200 Identities=6% Similarity=-0.064 Sum_probs=121.8
Q ss_pred CceEEEEEccCCCEEEEec--CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 7 ITIHHLALNQDHGCFATGT--ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
..+..|+|++.+..|..+. ++.|..++++.......... .......+++.+....+.++.. ..+.|.+.++.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~---g~~~P~GlAvD~~~~~LY~tD~---~~~~I~v~~~d 110 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF---GLDYPEGMAVDWLGKNLYWADT---GTNRIEVSKLD 110 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---SCSCCCEEEEETTTTEEEEEET---TTTEEEEEETT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC---CCCCcceEEEEeCCCEEEEEEC---CCCEEEEEecC
Confidence 3577999999777766554 78888888875433222221 1234566778777777766654 35899999976
Q ss_pred CccEEeee-ccCcceeEEEEecc-eeEEEe----cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCC
Q 018248 85 ENRYLGEL-SFRSEVKNVRLRRD-RIVVVL----NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLK 158 (359)
Q Consensus 85 ~~~~~~~~-~~~~~v~~~~~~~~-~~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 158 (359)
.......+ ..-.....+++.|. |.+... .+.|...++.... ...+-........+++.++++.++++-+ ..
T Consensus 111 G~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~P~GlalD~~~~~LY~aD~--~~ 187 (628)
T 4a0p_A 111 GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNVGRANGLTIDYAKRRLYWTDL--DT 187 (628)
T ss_dssp STTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSCSSEEEEEEETTTTEEEEEET--TT
T ss_pred CCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCCCCcceEEEccccCEEEEEEC--CC
Confidence 54332222 23355789999984 544442 4678888874333 2333222334456888888877666643 46
Q ss_pred eeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEe
Q 018248 159 GQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEM 217 (359)
Q Consensus 159 ~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~ 217 (359)
+.|...+.++...+.+.........+++.. +.+.++-...+. |...|..+++....+
T Consensus 188 ~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~-I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 188 NLIESSNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRS-IERANKTSGQNRTII 244 (628)
T ss_dssp TEEEEEETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCEEE
T ss_pred CEEEEEcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCE-EEEEECCCCCceEEE
Confidence 678877777654444444444456777764 344444444666 888887776544333
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.96 E-value=0.0093 Score=53.96 Aligned_cols=228 Identities=7% Similarity=-0.031 Sum_probs=128.0
Q ss_pred CEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccE-Eeeec-cCc
Q 018248 19 GCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRY-LGELS-FRS 96 (359)
Q Consensus 19 ~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~-~~~~~-~~~ 96 (359)
.+|+-+..+.|+..+++.......... ........+++.+..+.+.++.. ..+.|..+++..... ...+. .-.
T Consensus 10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~--~~~~~~~~ld~~~~~~~ly~sD~---~~~~I~r~~~~g~~~~~~v~~~~~~ 84 (619)
T 3s94_A 10 PLLLYANRRDLRLVDATNGKENATIVV--GGLEDAAAVDFVFSHGLIYWSDV---SEEAIKRTEFNKTESVQNVVVSGLL 84 (619)
T ss_dssp CCEEEECSSBEEEECCC---------C--BCCSCEEEEEEETTTTEEEEEET---TTTEEEEEEC-----CEEEECSSCS
T ss_pred ceEEEeccccEEEEeCCCCcceEEEEE--cCCCceEEEEEEeCCCEEEEEEC---CCCeEEEEEccCCCceEEEEeCCCC
Confidence 456666678899999875421111121 12345567788887787777664 358898888765432 22223 225
Q ss_pred ceeEEEEecc-eeEEE---ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeE
Q 018248 97 EVKNVRLRRD-RIVVV---LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSK 172 (359)
Q Consensus 97 ~v~~~~~~~~-~~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~ 172 (359)
....+++.+. +++.+ ..+.|.+.++........+.........+++.|....++++-.+ ..+.|.....++....
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g-~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRF 163 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECS-SSCEEEEEETTSCSCE
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccC-CCCEEEEEECCCCceE
Confidence 6889999984 44443 56899999985433222222233334568888876665554322 2456766667765554
Q ss_pred Eee-cccccccEEEEccCCcEEEEEe-CCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEE
Q 018248 173 YIT-AHASRIASIAMTLDGRFVATAS-SKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVF 250 (359)
Q Consensus 173 ~~~-~~~~~i~~~~~s~~~~~l~~~~-~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 250 (359)
.+. ..-...+.+++++++..|..+. ..+. |..+|+.... ...+... .......+++..+ ..+++-...+.|...
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~-I~~~~~dG~~-~~~~~~~-~~~~P~gi~~~~~-~ly~td~~~~~V~~~ 239 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDGTN-RQAVVKG-SLPHPFALTLFED-ILYWTDWSTHSILAC 239 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCC-EEEESSSCCE-EC----------CCCEEESSS-EEEEECTTTCSEEEE
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCe-EEEecCCCCc-cEEEEeC-CCCCceEEEEeCC-EEEEecCCCCEEEEE
Confidence 443 2344678999999776666654 4456 8888875433 3222211 1123356777655 444444456778888
Q ss_pred EccCCC
Q 018248 251 GLKVDS 256 (359)
Q Consensus 251 ~~~~~~ 256 (359)
|..+++
T Consensus 240 d~~tg~ 245 (619)
T 3s94_A 240 NKYTGE 245 (619)
T ss_dssp ESSSCC
T ss_pred ECCCCc
Confidence 877664
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.89 E-value=0.0071 Score=49.77 Aligned_cols=133 Identities=12% Similarity=0.248 Sum_probs=88.0
Q ss_pred ecCeEEEEEcccceeeeeEeccCCCceeeeeec----CCCcc-EEEecCCC--CeeEEEEec--CCeeeEEeec------
Q 018248 112 LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQ----NAGPM-VMACPGLL--KGQVRVEDY--GTKKSKYITA------ 176 (359)
Q Consensus 112 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~l~~~g~~--d~~v~~~~~--~~~~~~~~~~------ 176 (359)
..+.+.+||+ +++.++.+.. ...+-+.+-| .++.. +++++... +++|.++.. ....+..+..
T Consensus 48 k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~ 124 (355)
T 3amr_A 48 KKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIA 124 (355)
T ss_dssp TTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEE
T ss_pred CCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcC
Confidence 5678999999 8888888753 3445555554 22221 22222434 578888755 3445555522
Q ss_pred cc-ccccEEEE--ccC-Cc-EEEEEeCCCCeEEEEEcC-------CCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC
Q 018248 177 HA-SRIASIAM--TLD-GR-FVATASSKGTLIRVFNTM-------DGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK 244 (359)
Q Consensus 177 ~~-~~i~~~~~--s~~-~~-~l~~~~~dg~~i~iwd~~-------~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 244 (359)
.. ..+..+++ +|. ++ ++++...+|. +..|++. +.+.+++|.. .+.+..+...+....|+.+-++
T Consensus 125 t~~~~pyGlcly~~~~~g~~yafV~~k~G~-~~q~~l~~~~~g~~~~~lVR~f~l---gsq~EgcvvDd~~g~Lyv~eEd 200 (355)
T 3amr_A 125 TAINEVYGFTLYHSQKTGKYYAMVTGKEGE-FEQYELKADKNGYISGKKVRAFKM---NSQTEGMAADDEYGRLYIAEED 200 (355)
T ss_dssp CCCSSCCCEEEEECTTTCCEEEEEECSSSE-EEEEEEEECTTSCEEEEEEEEEEC---SSCEEEEEEETTTTEEEEEETT
T ss_pred CCCCCeeEEEEEecCCCCcEEEEEECCCCe-EEEEEEEeCCCCcccceEEEEecC---CCCcceEEEcCCCCeEEEeccc
Confidence 11 55677888 674 44 6788888898 9999882 3466777775 3578899999988899998888
Q ss_pred CcEEEEEcc
Q 018248 245 GTVHVFGLK 253 (359)
Q Consensus 245 g~i~iw~~~ 253 (359)
.- ||.+.
T Consensus 201 ~G--Iw~~d 207 (355)
T 3amr_A 201 EA--IWKFS 207 (355)
T ss_dssp TE--EEEEE
T ss_pred ce--EEEEe
Confidence 54 56555
No 301
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.64 E-value=0.0085 Score=58.27 Aligned_cols=220 Identities=14% Similarity=0.151 Sum_probs=137.2
Q ss_pred CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecc
Q 018248 27 TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRD 106 (359)
Q Consensus 27 ~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 106 (359)
..|.|.|+.......++... . ...-++|..+.+++-+ ..++.|+|+++.+.+..+..+.+|.--.|-..
T Consensus 48 ~~vvIidl~~~~~~~rrpi~----A--dsAIMnP~~~iiALra-----g~~lQiFnl~~k~klks~~~~e~VvfWkWis~ 116 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRPIS----A--DSAIMNPASKVIALKA-----GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL 116 (1630)
T ss_pred ceEEEEECCCCCCccccccc----c--hhhccCCCcceEEEec-----CCeEEEeehHHhhhhcccccCCCceEEEecCC
Confidence 46888888876655444432 1 1223566667666654 28999999999999999887778888888555
Q ss_pred eeE-EEecCeEEEEEccc-ceeeeeEeccC--CCceeeeeecCCCccEEEecC------CCCeeEEEEecCCeeeEEeec
Q 018248 107 RIV-VVLNQKVYVYNFTD-LKLVDQIETVV--NPTGLCDVSQNAGPMVMACPG------LLKGQVRVEDYGTKKSKYITA 176 (359)
Q Consensus 107 ~~~-~~~d~~i~i~d~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~g------~~d~~v~~~~~~~~~~~~~~~ 176 (359)
..+ ++.+..|+.|++.. ..+.+.+..|. ....++.+..+.+..+++..| .-.|.+.++....+..+.+.+
T Consensus 117 ~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ieg 196 (1630)
T 1xi4_A 117 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (1630)
T ss_pred CeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhH
Confidence 444 44999999999953 34444443332 123344444444444444322 235788888888888888888
Q ss_pred ccccccEEEEc--cC-CcEEEEEeC---CCCeEEEEEcCCC---cEEE-------EeecCCCCcceEEEEecCCCCEEEE
Q 018248 177 HASRIASIAMT--LD-GRFVATASS---KGTLIRVFNTMDG---SLLQ-------EMRRGAERAEIYSLAFSSNAQWLAA 240 (359)
Q Consensus 177 ~~~~i~~~~~s--~~-~~~l~~~~~---dg~~i~iwd~~~~---~~~~-------~~~~~~~~~~i~~~~~s~~~~~l~~ 240 (359)
|.+....+.+. +. ..+++.+.. .+. +.|-++... .... .+..........++..|+.-..+..
T Consensus 197 ha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k-Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~ 275 (1630)
T 1xi4_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (1630)
T ss_pred hHhhhheeccCCCCCCceEEEEEEecCCCce-EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEE
Confidence 87766555553 11 223333322 245 888887432 1110 0111111234567778887778888
Q ss_pred EcCCCcEEEEEccCCCCC
Q 018248 241 SSDKGTVHVFGLKVDSGS 258 (359)
Q Consensus 241 ~~~dg~i~iw~~~~~~~~ 258 (359)
.+.-|.|+++|+.++...
T Consensus 276 itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 276 ITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred EecCceEEEEecccchhh
Confidence 889999999999998743
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.56 E-value=0.0096 Score=48.55 Aligned_cols=160 Identities=10% Similarity=0.076 Sum_probs=97.0
Q ss_pred eeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEe-ecc-------cccccEEEE---ccCCcEEEEEeC--------
Q 018248 138 GLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYI-TAH-------ASRIASIAM---TLDGRFVATASS-------- 198 (359)
Q Consensus 138 ~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~-~~~-------~~~i~~~~~---s~~~~~l~~~~~-------- 198 (359)
....|.+....++ ++ ....+.|..|+..+.....+ ... ...+..+.| .|+++++++...
T Consensus 16 E~~~wd~~~g~~~-vs-~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 16 EDTIYDRTRQVFY-QS-NLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp SCEEEETTTTEEE-EE-ETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred cCccCcCCCCEEE-EE-eccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 4567766555433 33 44678898888774432222 111 113578999 688888776442
Q ss_pred -----CCCeEEEEEcC---CCcEEEEeecC--C---------CCcceEEEEecCCCCEEEEEcCC-CcEEEEEccCCCCC
Q 018248 199 -----KGTLIRVFNTM---DGSLLQEMRRG--A---------ERAEIYSLAFSSNAQWLAASSDK-GTVHVFGLKVDSGS 258 (359)
Q Consensus 199 -----dg~~i~iwd~~---~~~~~~~~~~~--~---------~~~~i~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~ 258 (359)
+.. |..||+. +++.+...... . .......++..++|+..++++.. +. ||.+......
T Consensus 94 ~~~~g~~~-v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~--I~rV~pdG~~ 170 (334)
T 2p9w_A 94 QSSHGASS-FHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA--IARVSADGKT 170 (334)
T ss_dssp CCSSSCCE-EEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE--EEEECTTSCC
T ss_pred cccCCCCE-EEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCe--EEEEeCCCCE
Confidence 566 8999998 77766554321 0 11358899999999999988877 65 4444433211
Q ss_pred CCCCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecCCcEEEeeecccCCEEEEEecCCeEEEEEeC
Q 018248 259 PGTSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPENVQYLVGFGRQNNTIVIVGLDGSYYKCEFD 337 (359)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~ 337 (359)
+..+ +..... ....--.+.++++|||+.|++....|.+..+++.
T Consensus 171 ---------------------------~~~~---~~~~~~-----~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 171 ---------------------------VSTF---AWESGN-----GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp ---------------------------EEEE---EECCCC-----SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred ---------------------------Eeee---eecCCC-----cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 0000 000000 0000124578999999999998889999888765
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.56 E-value=0.026 Score=46.96 Aligned_cols=203 Identities=12% Similarity=0.115 Sum_probs=110.5
Q ss_pred eEEEEEccCCCEEEEe-------------cCCceEEEEcCCCc-ceeeeecccC----CCCceeEEEEec--cCC-EEEE
Q 018248 9 IHHLALNQDHGCFATG-------------TETGFRVYLSDPYK-PIMRRDFDRN----PRGGTQLVSMLF--RSN-IICL 67 (359)
Q Consensus 9 v~~~~~s~~g~~l~~~-------------~d~~i~iw~~~~~~-~~~~~~~~~~----h~~~v~~~~~~~--~~~-~~~~ 67 (359)
.-.++..|+|..++++ .+|.|.++|.++.. ......+... ..-....+.+.. ++. .+++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3466678888877776 37889999987321 1112222200 112334444444 233 3444
Q ss_pred EecCCCCCCeEEEEECCCc-c---EEeeecc--CcceeEEEEecceeEEE-ec-------------------CeEEEEEc
Q 018248 68 VNSGPHQSNKVMIWDDHEN-R---YLGELSF--RSEVKNVRLRRDRIVVV-LN-------------------QKVYVYNF 121 (359)
Q Consensus 68 ~~~~~~~d~~i~iwd~~~~-~---~~~~~~~--~~~v~~~~~~~~~~~~~-~d-------------------~~i~i~d~ 121 (359)
+.... .+..|.+|++..+ . .+..+.+ -...+++.+.++|.+.+ .+ +.|+.+|.
T Consensus 132 vnh~~-~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 132 VNHPG-SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EECST-TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EECCC-CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 43332 3578888876543 2 2233332 24578899999998766 21 34555554
Q ss_pred ccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecC--Ce--eeEEeecccccccEEEEcc-CCcEEEEE
Q 018248 122 TDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG--TK--KSKYITAHASRIASIAMTL-DGRFVATA 196 (359)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~--~~--~~~~~~~~~~~i~~~~~s~-~~~~l~~~ 196 (359)
++ +..+...-...+-++|+|+++.++++-+ ..+.|..++.+ +. ..+.+ ...+..-.+++.+ +|++.+++
T Consensus 211 --~~-~~~~~~~l~~pNGia~spDg~~lYvadt--~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 211 --ND-VRVVAEGFDFANGINISPDGKYVYIAEL--LAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp --TC-CEEEEEEESSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred --Ce-EEEeecCCcccCcceECCCCCEEEEEeC--CCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 32 2222222233467899999988777653 45677775543 21 22233 2245667889999 59877766
Q ss_pred eCCCCeEEEEEcC--CCcEEEEee
Q 018248 197 SSKGTLIRVFNTM--DGSLLQEMR 218 (359)
Q Consensus 197 ~~dg~~i~iwd~~--~~~~~~~~~ 218 (359)
..++..|..|+.. .+..+..+.
T Consensus 285 ~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 285 HPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp ESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred cCCceEEEEECCCCCCCCEEEEEE
Confidence 5453214444432 244444443
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.44 E-value=0.018 Score=50.10 Aligned_cols=155 Identities=7% Similarity=0.052 Sum_probs=89.3
Q ss_pred ceeEEEEecc--eeEEE---ecCeEEEEEcccceeeeeEeccC---CCceeeee-------ecCCCccEEEecCCC----
Q 018248 97 EVKNVRLRRD--RIVVV---LNQKVYVYNFTDLKLVDQIETVV---NPTGLCDV-------SQNAGPMVMACPGLL---- 157 (359)
Q Consensus 97 ~v~~~~~~~~--~~~~~---~d~~i~i~d~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~~~l~~~g~~---- 157 (359)
....|+|.|. +.+++ ..+.|++.|+.++.....+.... .....++| +++++.++++.....
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568899983 44444 23578889987766554443321 22456788 888876555542210
Q ss_pred CeeEEEEecCC--eee-----EEeecccccccEEEEccCC-cEEEEEeCCCCeEEEEEcC-------CCcE---------
Q 018248 158 KGQVRVEDYGT--KKS-----KYITAHASRIASIAMTLDG-RFVATASSKGTLIRVFNTM-------DGSL--------- 213 (359)
Q Consensus 158 d~~v~~~~~~~--~~~-----~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~~i~iwd~~-------~~~~--------- 213 (359)
...|.+.+... ... ..+.. -.....++++|++ .++++-..++. |..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~-V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQ-VFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTE-EEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCE-EEEEecccccccccCceeecccccccc
Confidence 12244433232 211 22322 2345688899954 45555556777 9999987 5543
Q ss_pred --EEE-eecCCCCcceEEEEecCCCCEEE-EEcCCCcEEEEEccC
Q 018248 214 --LQE-MRRGAERAEIYSLAFSSNAQWLA-ASSDKGTVHVFGLKV 254 (359)
Q Consensus 214 --~~~-~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~iw~~~~ 254 (359)
... +... .......++|+|+|++|. +-+....|+.++...
T Consensus 298 g~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 298 NTFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp TTEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 222 2221 234568999999999544 445667788876653
No 305
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.40 E-value=0.01 Score=57.70 Aligned_cols=231 Identities=13% Similarity=0.189 Sum_probs=132.6
Q ss_pred EEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCc-cEEe
Q 018248 12 LALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHEN-RYLG 90 (359)
Q Consensus 12 ~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~-~~~~ 90 (359)
.-.+|..+.+|.=....+.|||+++........+ ..+|..-.|. +++.+++++ +..|.-|++... .+..
T Consensus 71 AIMnP~~~iiALrag~~lQiFnl~~k~klks~~~----~e~VvfWkWi-s~~~l~lVT-----~~aVyHW~~~~~s~P~k 140 (1630)
T 1xi4_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM----TDDVTFWKWI-SLNTVALVT-----DNAVYHWSMEGESQPVK 140 (1630)
T ss_pred hccCCCcceEEEecCCeEEEeehHHhhhhccccc----CCCceEEEec-CCCeeEEEc-----CCeEEEeccCCCCccHH
Confidence 4457777777776688899999997666654554 3455554443 567788887 588999998642 4444
Q ss_pred eec-c----CcceeEEEEecceeEEE----------ecCeEEEEEcccceeeeeEeccCCCceeeeeecCCC-ccEEE--
Q 018248 91 ELS-F----RSEVKNVRLRRDRIVVV----------LNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAG-PMVMA-- 152 (359)
Q Consensus 91 ~~~-~----~~~v~~~~~~~~~~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~-- 152 (359)
.+. | ..+|..-..+++.++++ ..|.+.+|..+. +.-+.+++|........+.-... ..+++
T Consensus 141 ~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~ 219 (1630)
T 1xi4_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFA 219 (1630)
T ss_pred HHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHhhhheeccCCCCCCceEEEEE
Confidence 443 2 45677777788888776 357888998743 33344555544332222211111 11111
Q ss_pred ecCCCCeeEEEEecCCe----ee------EEeec---ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeec
Q 018248 153 CPGLLKGQVRVEDYGTK----KS------KYITA---HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRR 219 (359)
Q Consensus 153 ~~g~~d~~v~~~~~~~~----~~------~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~ 219 (359)
......+.++|-..... +. ..+.. ...-..++..++.-..+...+.-|. |.+||+.++.++..-+-
T Consensus 220 ~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~-~~~~d~~t~~~i~~~ri 298 (1630)
T 1xi4_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMNRI 298 (1630)
T ss_pred EecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce-EEEEecccchhhhhccc
Confidence 11112256666333211 11 01111 1222346667776677888888998 99999999988765443
Q ss_pred CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 220 GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 220 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
...+|...+-+....-++.....|.|.--.++...
T Consensus 299 --s~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 299 --SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred --cCCceEEeccCCCCCceEEEcCCceEEEEEEccch
Confidence 23345444444333334445567766655555443
No 306
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.38 E-value=0.04 Score=44.98 Aligned_cols=151 Identities=6% Similarity=0.027 Sum_probs=94.6
Q ss_pred eEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEee-ecc-------CcceeEEEE---ecceeEEE--e--------
Q 018248 54 QLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGE-LSF-------RSEVKNVRL---RRDRIVVV--L-------- 112 (359)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~-~~~-------~~~v~~~~~---~~~~~~~~--~-------- 112 (359)
....|......+.+.+- ..++|..|+...+..... +.. ...+..+.+ .|++++++ .
T Consensus 16 E~~~wd~~~g~~~vs~l---~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNL---YKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp SCEEEETTTTEEEEEET---TTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCccCcCCCCEEEEEec---cCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 34566655555555553 469999999875543332 221 124678999 58877766 2
Q ss_pred ------cCeEEEEEcc---cceeeeeEecc-------------CCCceeeeeecCCCccEEEecCCCC-eeEEEEecCCe
Q 018248 113 ------NQKVYVYNFT---DLKLVDQIETV-------------VNPTGLCDVSQNAGPMVMACPGLLK-GQVRVEDYGTK 169 (359)
Q Consensus 113 ------d~~i~i~d~~---~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~~g~~d-~~v~~~~~~~~ 169 (359)
+..|..||+. +++.+...... ......+++.++++- .++ ++.. +.|...+.+++
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna--YVt-~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS--YVA-FALGMPAIARVSADGK 169 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE--EEE-EEESSCEEEEECTTSC
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE--EEe-CCCCCCeEEEEeCCCC
Confidence 4779999998 78776655421 112345566666553 332 3234 55665666665
Q ss_pred eeEEeec------ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCC
Q 018248 170 KSKYITA------HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDG 211 (359)
Q Consensus 170 ~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~ 211 (359)
.+..+.. .....+.|+++|+|+.|++....|. +..+|+.+.
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~-L~~fD~~~p 216 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRA-LTAFDVSKP 216 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSS-EEEEECSSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCe-EEEEcCCCC
Confidence 4443321 1223679999999998888877888 999998753
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.26 E-value=0.064 Score=44.78 Aligned_cols=225 Identities=10% Similarity=0.064 Sum_probs=114.3
Q ss_pred ceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecc--cCCCCceeEEEEecc---CCEEEEEecCCCCC---CeEE
Q 018248 8 TIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFD--RNPRGGTQLVSMLFR---SNIICLVNSGPHQS---NKVM 79 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~---~~~~~~~~~~~~~d---~~i~ 79 (359)
.-..|+|.|||+++++-.++.|++++ .++......+. .........++++++ +..+.++.... .+ +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~-~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA-EGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC-TTSSEEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC-CCCCccEEE
Confidence 45789999999976665588899988 33322111111 011234566777766 44554443211 11 5777
Q ss_pred EEECCCcc-----EE-eeecc----CcceeEEEEecceeEEEec----------------CeEEEEEcccc---------
Q 018248 80 IWDDHENR-----YL-GELSF----RSEVKNVRLRRDRIVVVLN----------------QKVYVYNFTDL--------- 124 (359)
Q Consensus 80 iwd~~~~~-----~~-~~~~~----~~~v~~~~~~~~~~~~~~d----------------~~i~i~d~~~~--------- 124 (359)
.++...+. .+ ..+.. ......++|.|+|.+.+.+ +.|.-++....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 88766432 11 11221 1234689999999766622 35655554320
Q ss_pred ---eeeeeE-eccCCCceeeeeecCCCccEEEecCCCCe-------eEEEEecCC-----------------eeeEEeec
Q 018248 125 ---KLVDQI-ETVVNPTGLCDVSQNAGPMVMACPGLLKG-------QVRVEDYGT-----------------KKSKYITA 176 (359)
Q Consensus 125 ---~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~d~-------~v~~~~~~~-----------------~~~~~~~~ 176 (359)
.....+ .++.+ ..-+++.|+...++++-.+. +. .|.+-.... .+...+.
T Consensus 189 ~~~~~~~i~a~G~rn-p~g~a~d~~~g~l~v~d~g~-~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~- 265 (352)
T 2ism_A 189 RRGARPEVYSLGHRN-PQGLAWHPKTGELFSSEHGP-SGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP- 265 (352)
T ss_dssp CTTSCTTEEEECCSE-ECCCEECTTTCCEEEEEECC-------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-
T ss_pred CCCCCccEEEEcCCC-cccEEEECCCCCEEEEEcCC-CCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC-
Confidence 011111 12222 23467777544555554332 22 233211111 1122221
Q ss_pred ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcE------EEEeecCCCCcceEEEEecCCCCEEEEEc
Q 018248 177 HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSL------LQEMRRGAERAEIYSLAFSSNAQWLAASS 242 (359)
Q Consensus 177 ~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 242 (359)
+......++| .+|.++++.-..+. |...++..... ...+.. ....+..+++.|||.++++..
T Consensus 266 ~~~ap~G~~~-~~G~l~v~~~~~~~-v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 266 QGFPPGNLAF-FRGDLYVAGLRGQA-LLRLVLEGERGRWRVLRVETALS--GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TCCCEEEEEE-ETTEEEEEETTTTE-EEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCcceEE-ECCEEEEEECCCCE-EEEEEECCCCcceeecchheecc--cCCCeeEEEECCCCcEEEEEe
Confidence 2223456777 46766555545555 77777653321 122222 235789999999998777654
No 308
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.25 E-value=0.056 Score=43.96 Aligned_cols=175 Identities=8% Similarity=0.020 Sum_probs=98.6
Q ss_pred ccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCcceeEEEEecceeEEE----e-------------cCeEEEEEcc
Q 018248 60 FRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRSEVKNVRLRRDRIVVV----L-------------NQKVYVYNFT 122 (359)
Q Consensus 60 ~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~-------------d~~i~i~d~~ 122 (359)
++++.+.+.... .++.|...+..... ...+.. .. +--+++++..+. . ...|+..++.
T Consensus 23 ~~g~~iy~~n~~--d~~~ly~~~~dg~~-~~~l~~-~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 23 ESDGEVFFSNTN--DNGRLYAMNIDGSN-IHKLSN-DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EETTEEEEEEGG--GTTEEEEEETTSCS-CEEEEE-EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EeCCEEEEEeCC--CCceEEEEcCCCCC-CEEccC-Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 467777776543 24677777744333 333331 11 234577777666 2 2467777775
Q ss_pred cceeeeeEeccCCCceeeeeecCCCccEEEe-cCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeC-CC
Q 018248 123 DLKLVDQIETVVNPTGLCDVSQNAGPMVMAC-PGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASS-KG 200 (359)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg 200 (359)
..+. ..+.. . ....++++++.++.+. +......|+.-..++...+.+..+.. .+++|+++.|+-.+. ..
T Consensus 97 g~~~-~~l~~--~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~ 167 (302)
T 3s25_A 97 GHGS-TVLDP--D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNG 167 (302)
T ss_dssp SCCC-EEEEC--S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTC
T ss_pred CCcc-eEeec--C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCc
Confidence 5542 22322 1 1236778888755543 11235566666667766666665533 456888988876665 55
Q ss_pred CeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCC--cEEEEEccCCC
Q 018248 201 TLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKG--TVHVFGLKVDS 256 (359)
Q Consensus 201 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~i~iw~~~~~~ 256 (359)
. |..-++..+.....+.. ... ..++|++.+|+-....+ .|..-+++...
T Consensus 168 ~-Iy~~~l~g~~~~~l~~~-----~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 168 Q-LYRYDTASQSEALFYDC-----NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp C-EEEEETTTTEEEEEECS-----CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred e-EEEEECCCCCEEEEeCC-----Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 6 88888766654433331 222 23569999887665432 45555555443
No 309
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.06 E-value=0.17 Score=45.86 Aligned_cols=225 Identities=8% Similarity=-0.031 Sum_probs=125.0
Q ss_pred EEEEecCCceEEEEcCCCccee-eeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEEeeec-cCcc
Q 018248 20 CFATGTETGFRVYLSDPYKPIM-RRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELS-FRSE 97 (359)
Q Consensus 20 ~l~~~~d~~i~iw~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~-~~~~ 97 (359)
+|+.+..+.|+..++++..... ...+. .-.....+++.+..+.+.++.. ..+.|..+++........+. .-..
T Consensus 319 ~Ll~~~~~~i~~i~l~~~~~~~~~~~~~--~l~~~~~ld~d~~~~~ly~sD~---~~~~I~r~~~~g~~~~~v~~~~~~~ 393 (619)
T 3s94_A 319 LLLLARRTDLRRISLDTPDFTDIVLQLE--DIRHAIAIDYDPVEGYIYWTDD---EVRAIRRSFIDGSGSQFVVTAQIAH 393 (619)
T ss_dssp EEEEEESSCEEEEESSSTTCCCEECCCS--CCSSEEEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEECSSCSC
T ss_pred EEEEEcccceEEEecCCCccceeEEecc--ccCccEEEEEEcCCCeEEEEeC---CCCeEEEEEcCCCccEEEEECCCCC
Confidence 4555556677777776543221 11111 1233455666665666766654 35889999876543333333 2246
Q ss_pred eeEEEEecc-eeEEE---ecCeEEEEEcccceeeeeE-eccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeE
Q 018248 98 VKNVRLRRD-RIVVV---LNQKVYVYNFTDLKLVDQI-ETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSK 172 (359)
Q Consensus 98 v~~~~~~~~-~~~~~---~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~ 172 (359)
...+++... +++.. ..+.|.+.++.... ...+ ...-.....+++.|....++++-.| ....|.....++....
T Consensus 394 p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly~tD~g-~~~~I~r~~~dG~~~~ 471 (619)
T 3s94_A 394 PDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMYWTDWG-EIPKIERAALDGSDRV 471 (619)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSCE
T ss_pred cCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEEEecCC-CCCEEEEEccCCCccE
Confidence 778888863 43333 56789999885432 2333 2233345678888876655554322 2456666666665444
Q ss_pred Eee-cccccccEEEEccCCcEEEEEeCC-CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEE
Q 018248 173 YIT-AHASRIASIAMTLDGRFVATASSK-GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVF 250 (359)
Q Consensus 173 ~~~-~~~~~i~~~~~s~~~~~l~~~~~d-g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 250 (359)
.+. ..-...+.+++++++..|..+... +. |..+++........+.. ......+++...+ .+..+-...+.|...
T Consensus 472 ~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~-I~~~~~dG~~~~~~~~~--~l~~P~glav~~~-~ly~tD~~~~~I~~~ 547 (619)
T 3s94_A 472 VLVNTSLGWPNGLALDYDEGKIYWGDAKTDK-IEVMNTDGTGRRVLVED--KIPHIFGFTLLGD-YVYWTDWQRRSIERV 547 (619)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEESSSCCCEEEEEC--CCCSSCCEEEETT-EEEEECTTSSCEEEE
T ss_pred EEEeCCCCCCeeeEEcccCCEEEEEECCCCE-EEEEecCCCceEEEecc--CCCCcEEEEEECC-EEEEeecCCCeEEEE
Confidence 443 234567899999877777666544 55 88888754332222221 1123345565433 333333345567777
Q ss_pred EccCC
Q 018248 251 GLKVD 255 (359)
Q Consensus 251 ~~~~~ 255 (359)
+..++
T Consensus 548 ~k~~g 552 (619)
T 3s94_A 548 HKRSA 552 (619)
T ss_dssp ESSSC
T ss_pred EcCCC
Confidence 76665
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.06 E-value=0.1 Score=43.51 Aligned_cols=229 Identities=13% Similarity=0.086 Sum_probs=118.3
Q ss_pred CceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecc--cCCCCceeEEEEecc---CCEEEEEecC-CCCC----C
Q 018248 7 ITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFD--RNPRGGTQLVSMLFR---SNIICLVNSG-PHQS----N 76 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~---~~~~~~~~~~-~~~d----~ 76 (359)
.....|+|.|||+++++-.++.|++++.+ ++ .....+. .........+++.++ ...+.++... . .+ .
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~-~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISPS-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA-EGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECSS-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC-GGGCEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeCC-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC-CCCCcce
Confidence 34578999999987666658889888733 33 2112110 011234566777765 3444443321 0 12 5
Q ss_pred eEEEEECCCc-------cEE-eeec--cCcceeEEEEecceeEEEe--c--------------CeEEEEEccccee----
Q 018248 77 KVMIWDDHEN-------RYL-GELS--FRSEVKNVRLRRDRIVVVL--N--------------QKVYVYNFTDLKL---- 126 (359)
Q Consensus 77 ~i~iwd~~~~-------~~~-~~~~--~~~~v~~~~~~~~~~~~~~--d--------------~~i~i~d~~~~~~---- 126 (359)
.|..++...+ +.+ ..+. .......+.|.|+|.+.+. + +.|..++.. ++.
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCC
Confidence 6777776543 111 1122 1123467999999977662 1 355555542 221
Q ss_pred ----eeeE-eccCCCceeeeeecCCCccEEEecCCCC-eeEEEEecCC-----------------eeeEEeecccccccE
Q 018248 127 ----VDQI-ETVVNPTGLCDVSQNAGPMVMACPGLLK-GQVRVEDYGT-----------------KKSKYITAHASRIAS 183 (359)
Q Consensus 127 ----~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~d-~~v~~~~~~~-----------------~~~~~~~~~~~~i~~ 183 (359)
...+ .++.++ .-++|.++...++++-.+... ..|.+-.... .++..+.........
T Consensus 185 pf~~~~i~a~G~rnp-~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 185 PFPNSPIWSYGHRNP-QGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp SSTTCCEEEECCSCC-CEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCCCcEEEEccCCc-ceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 1111 223332 357788744445554433211 1222211110 122222111234677
Q ss_pred EEEc-------cCCcEEEEEeCCCCeEEEEEcCCC-cEE--EEeecCCCCcceEEEEecCCCCEEEEEc
Q 018248 184 IAMT-------LDGRFVATASSKGTLIRVFNTMDG-SLL--QEMRRGAERAEIYSLAFSSNAQWLAASS 242 (359)
Q Consensus 184 ~~~s-------~~~~~l~~~~~dg~~i~iwd~~~~-~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 242 (359)
++|. .+|.++++.-..+. |...++... +.. ..+... ....+..+++.|||.++++..
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~-v~~~~~~~~g~~~~~~~~~~~-~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSM-LAAVNFGDNMEVRKISTFFKN-VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTE-EEEEEECGGGCEEEEEEECTT-TSCCEEEEEECTTSCEEEEEC
T ss_pred eEEECCCCCcccCCcEEEEEcCCCE-EEEEEECCCCcccceeeeccC-CCCCeeEEEECCCCcEEEEEe
Confidence 8883 56766666555566 888887653 322 233221 235789999999998777654
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.06 E-value=0.061 Score=45.42 Aligned_cols=133 Identities=14% Similarity=0.172 Sum_probs=83.0
Q ss_pred ecCeEEEEEcccceeeeeEecc----CCCceeeeeecCCCccEEEecCCCCeeEEEEecC-C---e---------eeEEe
Q 018248 112 LNQKVYVYNFTDLKLVDQIETV----VNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-T---K---------KSKYI 174 (359)
Q Consensus 112 ~d~~i~i~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~---~---------~~~~~ 174 (359)
.++.||.-++.....-+.+... ...+..+.++|+++. ||..| +..|.|-... + . ..+.+
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~l--LAl~g--~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty 114 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDL--LCLFN--DNEIFVMEVPWGYSNVEDVSIQDAFQIFHY 114 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSE--EEEEC--SSEEEEEECCTTCSCCCCHHHHHTTEEEEE
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCE--EEEec--CCeEEEEEecCccccCcccccccccceeEE
Confidence 7888888888644444444443 224666888888876 55444 4456652222 1 0 11222
Q ss_pred ec------ccccccEEEEccC---CcEEEEEeCCCCeEEEEEcCCCc--EEEEeec-------CCCCcceEEEEecCCCC
Q 018248 175 TA------HASRIASIAMTLD---GRFVATASSKGTLIRVFNTMDGS--LLQEMRR-------GAERAEIYSLAFSSNAQ 236 (359)
Q Consensus 175 ~~------~~~~i~~~~~s~~---~~~l~~~~~dg~~i~iwd~~~~~--~~~~~~~-------~~~~~~i~~~~~s~~~~ 236 (359)
.- ...+|..+.|+|- +..|++-..|+. |++||+.... +. .+.. ......|.+++|.+++-
T Consensus 115 ~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~-Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~l 192 (452)
T 3pbp_A 115 SIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT-ITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGL 192 (452)
T ss_dssp EGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC-EEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSS
T ss_pred EcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE-EEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCc
Confidence 22 2467999999995 458999999999 9999997522 22 2221 11225788999999877
Q ss_pred EEEEEc--CCCcEEEE
Q 018248 237 WLAASS--DKGTVHVF 250 (359)
Q Consensus 237 ~l~~~~--~dg~i~iw 250 (359)
.|...+ ..|.|+-.
T Consensus 193 TLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 193 TLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEECTTSCEEEEE
T ss_pred EEEEEecCCCCCEEEE
Confidence 666644 77876644
No 312
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.05 E-value=0.099 Score=43.07 Aligned_cols=189 Identities=8% Similarity=-0.054 Sum_probs=100.8
Q ss_pred CCCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECC
Q 018248 5 DPITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDH 84 (359)
Q Consensus 5 h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~ 84 (359)
++..+..+.+.++++.++++.++.| |....+......... ++...+..+.+.+++..++ ++ .++.+..-+-.
T Consensus 120 ~~~~~~~i~~~~~~~~~~~~~~g~v--~~S~DgG~tW~~~~~-~~~~~~~~~~~~~~~~~~~-~g----~~G~~~~S~d~ 191 (327)
T 2xbg_A 120 LPGSPRLIKALGNGSAEMITNVGAI--YRTKDSGKNWQALVQ-EAIGVMRNLNRSPSGEYVA-VS----SRGSFYSTWEP 191 (327)
T ss_dssp CSSCEEEEEEEETTEEEEEETTCCE--EEESSTTSSEEEEEC-SCCCCEEEEEECTTSCEEE-EE----TTSSEEEEECT
T ss_pred CCCCeEEEEEECCCCEEEEeCCccE--EEEcCCCCCCEEeec-CCCcceEEEEEcCCCcEEE-EE----CCCcEEEEeCC
Confidence 3456788888888887777766643 333332222322221 3455666677766555443 33 23444433212
Q ss_pred CccEEeee--ccCcceeEEEEecceeEEE--ecCeEEEEEcccceeeeeEecc----CCCceeeeeecCCCccEEEecCC
Q 018248 85 ENRYLGEL--SFRSEVKNVRLRRDRIVVV--LNQKVYVYNFTDLKLVDQIETV----VNPTGLCDVSQNAGPMVMACPGL 156 (359)
Q Consensus 85 ~~~~~~~~--~~~~~v~~~~~~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~g~ 156 (359)
.++.-..+ .....+..+.+.+++.+++ .+|.+++.+...++.-..+... ...+..+.+.+++ .++++ +
T Consensus 192 gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~--~~~~~-g- 267 (327)
T 2xbg_A 192 GQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPN--EVWLA-G- 267 (327)
T ss_dssp TCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSS--CEEEE-E-
T ss_pred CCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCC--EEEEE-e-
Confidence 12222222 2456788888988887666 6777777643234443333221 1224445555543 33444 3
Q ss_pred CCeeEEEEecCCeeeEEeec---ccccccEEEEccCCcEEEEEeCCCCeEEEEE
Q 018248 157 LKGQVRVEDYGTKKSKYITA---HASRIASIAMTLDGRFVATASSKGTLIRVFN 207 (359)
Q Consensus 157 ~d~~v~~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd 207 (359)
.++.+..-...+..-..+.. ....+.++.|.++++ +++++.+|. |.-++
T Consensus 268 ~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~-i~~~~ 319 (327)
T 2xbg_A 268 GAGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGI-LLRYV 319 (327)
T ss_dssp STTCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTE-EEEEC
T ss_pred CCCeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCce-EEEEc
Confidence 36666543333444343332 245688999976665 556667887 66554
No 313
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.041 Score=45.31 Aligned_cols=109 Identities=12% Similarity=0.110 Sum_probs=66.2
Q ss_pred EEEEec-CCceEEEEcCCCcceeeeecccCCCCceeEEE-Ee-ccCCEEEEEecCCCCCCeEEEEECCCccEEeeeccCc
Q 018248 20 CFATGT-ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVS-ML-FRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSFRS 96 (359)
Q Consensus 20 ~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~-~~-~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~ 96 (359)
.+++++ ||.|.-+|.++++........ ...++.... -. .....++++... .||.|..++..+|.....+..+.
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~--~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPF--GDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCS--TTTEEEEEETTTEEEEEEEEHHH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEEC--CCCEEEEEECCCCcEEeeecccc
Confidence 556666 999999999988887766541 101111100 00 112244444211 47999999998886655544222
Q ss_pred cee--EEEE------------ecceeEEE--ecCeEEEEEcccceeeeeEec
Q 018248 97 EVK--NVRL------------RRDRIVVV--LNQKVYVYNFTDLKLVDQIET 132 (359)
Q Consensus 97 ~v~--~~~~------------~~~~~~~~--~d~~i~i~d~~~~~~~~~~~~ 132 (359)
.+. -+.. +.++.+++ .++.+...|+.+|+.+..+..
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 121 1221 24666666 899999999999999998864
No 314
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.68 E-value=0.41 Score=44.57 Aligned_cols=228 Identities=15% Similarity=0.198 Sum_probs=119.7
Q ss_pred CCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC
Q 018248 6 PITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
.+.|.+|.-..+|.+- .|+...+..||-...+.. ..........|.++. .+.+..+.++. +.-+..||..+
T Consensus 21 ~n~V~~I~qD~~G~lW-igT~~GL~ryDG~~~~~~--~~~~~~~~~~i~~i~--~d~~g~lWigT----~~Gl~~yd~~~ 91 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIW-IGSNKGLFSYDGYSTQQH--FTYGENNNTRIYCGV--IIDNTYLYMGT----DNGILVYNYRA 91 (758)
T ss_dssp CCCEEEEEECTTSCEE-EEESSCEEEECSSCEEEC--SCTTSTTSSCEEEEE--EETTTEEEEEE----TTEEEEEETTT
T ss_pred cceEEEEEECCCCCEE-EEECCCccccCCCceEEE--EccCCCCCceEEEEE--EcCCCcEEEEe----CCCeEEEeCCC
Confidence 4679999988888544 455455777774321111 000000123344433 33443444442 24588999877
Q ss_pred ccEEeeec-cCcceeEEEEecceeEEE-ecCeEEEEEcccceeeeeEec-----cCCCceeeeeecCCCc-cEEEecCCC
Q 018248 86 NRYLGELS-FRSEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKLVDQIET-----VVNPTGLCDVSQNAGP-MVMACPGLL 157 (359)
Q Consensus 86 ~~~~~~~~-~~~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~l~~~g~~ 157 (359)
.+...... ....|.++... ++.+.+ ..+.+..+|..+++.. .+.. ....+. ++..+.+. +++++ .
T Consensus 92 ~~f~~~~~~~~~~i~~i~~~-~g~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~--~i~~d~~g~lWigt---~ 164 (758)
T 3ott_A 92 DRYEQPETDFPTDVRTMALQ-GDTLWLGALNGLYTYQLQSRKLT-SFDTRRNGLPNNTIY--SIIRTKDNQIYVGT---Y 164 (758)
T ss_dssp TEECCCSCCCCSCEEEEEEE-TTEEEEEETTEEEEEETTTCCEE-EECHHHHCCSCSCEE--EEEECTTCCEEEEE---T
T ss_pred CEEECcccCCCceEEEEEec-CCcEEEEcCCcceeEeCCCCeEE-EeccCCCCcCCCeEE--EEEEcCCCCEEEEe---C
Confidence 64332111 23356666554 454444 6668899998655432 2211 112233 33444333 34433 3
Q ss_pred CeeEEEEecCCeeeEEeecc------cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEe
Q 018248 158 KGQVRVEDYGTKKSKYITAH------ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAF 231 (359)
Q Consensus 158 d~~v~~~~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 231 (359)
.| +..++........+... ...|.++...+++..|..|+. +. +..+|..+++... +... ....|.++..
T Consensus 165 ~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G-l~~~~~~~~~~~~-~~~l-~~~~i~~i~~ 239 (758)
T 3ott_A 165 NG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY-LFQYFPSTGQIKQ-TEAF-HNNSIKSLAL 239 (758)
T ss_dssp TE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE-EEEEETTTTEEEE-EEEE-EEEEEEEEEE
T ss_pred CC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CC-CeEEcCCCCeEEe-ccCC-CCCeEEEEEE
Confidence 45 44445444333332211 123778887777765555654 45 8899987765432 2111 2246888888
Q ss_pred cCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 232 SSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 232 s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
..+|.+.+. +.+| +.+++..+..
T Consensus 240 d~~g~lWig-T~~G-l~~~~~~~~~ 262 (758)
T 3ott_A 240 DGNGDLLAG-TDNG-LYVYHNDTTP 262 (758)
T ss_dssp CTTCCEEEE-ETTE-EEEECCTTSC
T ss_pred cCCCCEEEE-eCCc-eeEEecCCCc
Confidence 888877664 4444 7888776543
No 315
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.34 E-value=0.88 Score=44.48 Aligned_cols=172 Identities=13% Similarity=0.183 Sum_probs=100.3
Q ss_pred CeEEEEECCCccEEeeec--cCcceeEEEE---ecc-eeEEE-------------ecCeEEEEEcccceeeeeEe-ccCC
Q 018248 76 NKVMIWDDHENRYLGELS--FRSEVKNVRL---RRD-RIVVV-------------LNQKVYVYNFTDLKLVDQIE-TVVN 135 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~~--~~~~v~~~~~---~~~-~~~~~-------------~d~~i~i~d~~~~~~~~~~~-~~~~ 135 (359)
..|++.|..+.+.+..+. ....+.+++. ..+ ..+++ ..|.|++|++..++.....+ ...+
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 457888888888777666 3445555553 222 23443 24789999986443322221 1234
Q ss_pred CceeeeeecCCCccEEEecCCCCeeEEEEecCCe-eeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcC-CCcE
Q 018248 136 PTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK-KSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTM-DGSL 213 (359)
Q Consensus 136 ~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~-~~~~ 213 (359)
++. ++++-+.. +++.. ...+++|+...+ .++.-..+-..+..+.....+.+++.|..-.. |.++..+ ....
T Consensus 887 ~v~--al~~~~g~-Lla~i---g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~S-v~~~~y~~~~~~ 959 (1158)
T 3ei3_A 887 AVY--SMVEFNGK-LLASI---NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRS-VLLLAYKPMEGN 959 (1158)
T ss_dssp CEE--EEEEETTE-EEEEE---TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBC-EEEEEEETTTTE
T ss_pred cCE--EEeeeCCE-EEEEc---CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhhe-EEEEEEEcCCCe
Confidence 443 44443333 44443 458898776643 23311111122444444446788999987777 7765443 2334
Q ss_pred EEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 018248 214 LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 214 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 255 (359)
+..+.....+..++++.+-.++ .++.+..+|.+.+......
T Consensus 960 L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 960 FEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp EEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECTT
T ss_pred EEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCCC
Confidence 4455545566789999887554 6677889999999988764
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.15 E-value=0.47 Score=39.49 Aligned_cols=94 Identities=15% Similarity=0.188 Sum_probs=52.7
Q ss_pred ceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc--EEeeec----cCcceeEEEEecc----eeEEE--e-c-----
Q 018248 52 GTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR--YLGELS----FRSEVKNVRLRRD----RIVVV--L-N----- 113 (359)
Q Consensus 52 ~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~--~~~~~~----~~~~v~~~~~~~~----~~~~~--~-d----- 113 (359)
....+++.+++. ++++. .++.|.+++ +++ .+..+. .......++++|+ +.+.+ . .
T Consensus 32 ~P~~ia~~pdG~-l~V~e----~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIAE----RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CEEEEEECTTSC-EEEEE----TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CceEEEEcCCCe-EEEEe----CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 345677777776 33333 458999998 333 222221 2356789999998 44433 2 2
Q ss_pred CeEEEEEcccce-----ee-eeEe---ccCCCceeeeeecCCCccEEEe
Q 018248 114 QKVYVYNFTDLK-----LV-DQIE---TVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 114 ~~i~i~d~~~~~-----~~-~~~~---~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
+.|..++....+ .+ ..+. ...+....+++.|++ .++++.
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~ 152 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTT 152 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEEC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEE
Confidence 678888875431 11 1122 111233568888887 455543
No 317
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.00 E-value=0.55 Score=39.02 Aligned_cols=136 Identities=10% Similarity=0.077 Sum_probs=72.6
Q ss_pred ecCeEEEEEccc--ceeeeeEeccC-------CCceeeeeec--CCCccEEEe-cCCCCeeEEEEe--cCCeeeE---Ee
Q 018248 112 LNQKVYVYNFTD--LKLVDQIETVV-------NPTGLCDVSQ--NAGPMVMAC-PGLLKGQVRVED--YGTKKSK---YI 174 (359)
Q Consensus 112 ~d~~i~i~d~~~--~~~~~~~~~~~-------~~~~~~~~~~--~~~~~~l~~-~g~~d~~v~~~~--~~~~~~~---~~ 174 (359)
.+|.|.++|..+ ++ ...+.... -...-+.+.+ ++...++++ .+..+..+.++. ..+.... .+
T Consensus 81 ~~G~I~~~d~~~~~~~-~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPA-VSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCC-EEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCc-eEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 478899999863 22 12222111 1122334434 333223333 222245666643 3333322 22
Q ss_pred ecc-cccccEEEEccCCcEEEEEeC-----------------CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCC
Q 018248 175 TAH-ASRIASIAMTLDGRFVATASS-----------------KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQ 236 (359)
Q Consensus 175 ~~~-~~~i~~~~~s~~~~~l~~~~~-----------------dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 236 (359)
.+. -...+.+++.++|.+.++... .|. |.-+|. ++.. .+.. .-...+.++||||++
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~-vyr~d~--~~~~-~~~~--~l~~pNGia~spDg~ 233 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSF-VTYYSP--NDVR-VVAE--GFDFANGINISPDGK 233 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEE-EEEECT--TCCE-EEEE--EESSEEEEEECTTSS
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccE-EEEEEC--CeEE-Eeec--CCcccCcceECCCCC
Confidence 221 235689999999998777541 233 444443 4322 2222 224678999999998
Q ss_pred EEEEEc-CCCcEEEEEccC
Q 018248 237 WLAASS-DKGTVHVFGLKV 254 (359)
Q Consensus 237 ~l~~~~-~dg~i~iw~~~~ 254 (359)
.|..+. ..+.|..|++..
T Consensus 234 ~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 234 YVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEEGGGTEEEEEEECT
T ss_pred EEEEEeCCCCeEEEEEECC
Confidence 776654 567899999974
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.98 E-value=0.52 Score=38.99 Aligned_cols=158 Identities=10% Similarity=0.005 Sum_probs=82.9
Q ss_pred CcceeEEEEecceeEEE--e-cCeEEEEEcccceeee--eEe----ccCCCceeeeeecC---CCccEEEecCCCCeeEE
Q 018248 95 RSEVKNVRLRRDRIVVV--L-NQKVYVYNFTDLKLVD--QIE----TVVNPTGLCDVSQN---AGPMVMACPGLLKGQVR 162 (359)
Q Consensus 95 ~~~v~~~~~~~~~~~~~--~-d~~i~i~d~~~~~~~~--~~~----~~~~~~~~~~~~~~---~~~~~l~~~g~~d~~v~ 162 (359)
-...+.++|.|+|.+++ . .|.|++++..+++... .+. .......-++++|+ +..+++..+...++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 34678999999998877 4 7899999865554321 111 11223456788885 34455554332334443
Q ss_pred EEecCC---------eeeE---Eee-cccccccEEEEccCCcEEEEEeC-------------CCCeEEEEEcCCCc----
Q 018248 163 VEDYGT---------KKSK---YIT-AHASRIASIAMTLDGRFVATASS-------------KGTLIRVFNTMDGS---- 212 (359)
Q Consensus 163 ~~~~~~---------~~~~---~~~-~~~~~i~~~~~s~~~~~l~~~~~-------------dg~~i~iwd~~~~~---- 212 (359)
-+.... .... .+. .....-..|+|.|||.+.++.+. .|. |.-.+.. ++
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~-IlRi~~d-G~ip~~ 188 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGK-ILRMTPD-GEPAPG 188 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTC-EEEECTT-SSBCTT
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCE-EEEEeCC-CCccCC
Confidence 343332 1111 121 11223467999999987666542 244 4333432 22
Q ss_pred ----EEEEeecCCCCcceEEEEecCCCCEEEEEc-CCCcEEEEEccCCC
Q 018248 213 ----LLQEMRRGAERAEIYSLAFSSNAQWLAASS-DKGTVHVFGLKVDS 256 (359)
Q Consensus 213 ----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~ 256 (359)
....+..+ + .....++|+|+|++.++=. .++.=.|-.+..+.
T Consensus 189 nPf~~~~i~a~G-~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ 235 (347)
T 3das_A 189 NPFPGSPVYSYG-H-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGD 235 (347)
T ss_dssp CSSTTCCEEEBC-C-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTC
T ss_pred CCCCCCeEEeeC-C-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCC
Confidence 01112212 2 2456899999987766532 33334444454443
No 319
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.90 E-value=0.29 Score=40.33 Aligned_cols=110 Identities=10% Similarity=0.175 Sum_probs=64.7
Q ss_pred ceeEEE--ecCeEEEEEcccceeeeeEeccC-CCceeeeee-c---CCCccEEEecCCCCeeEEEEecCCee-eEEeecc
Q 018248 106 DRIVVV--LNQKVYVYNFTDLKLVDQIETVV-NPTGLCDVS-Q---NAGPMVMACPGLLKGQVRVEDYGTKK-SKYITAH 177 (359)
Q Consensus 106 ~~~~~~--~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~-~---~~~~~~l~~~g~~d~~v~~~~~~~~~-~~~~~~~ 177 (359)
++.+++ .||.|+-+|..+|+....++... .+. +... + .+... ++.....||.++..+..... ...+...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~--~~~~~~~~~~~~~~-~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPL--IEIQEPSRLETYET-LIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCS--EECCCSCTTTSSEE-EEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCc--EEecCCccccCCcE-EEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 344444 89999999999999999887641 111 1111 1 11222 33212468888886654432 2222111
Q ss_pred cccc--cEEEEc-----------cCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecC
Q 018248 178 ASRI--ASIAMT-----------LDGRFVATASSKGTLIRVFNTMDGSLLQEMRRG 220 (359)
Q Consensus 178 ~~~i--~~~~~s-----------~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~ 220 (359)
..+ .-+... ..+..+++|+.+|. +...|+++|+.+.++..+
T Consensus 87 -~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~-l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 -QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI-MYTINMLNGEIISAFGPG 140 (339)
T ss_dssp -HHHTTCSEEEECC----------CCEEEEECEEEEE-EEEEETTTCCEEEEESTT
T ss_pred -cceeccccccCCCceeecccccccCCEEEEEecCCE-EEEEECCCCcEEEEEecC
Confidence 111 011111 14557789999999 999999999999998754
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.77 E-value=0.04 Score=41.94 Aligned_cols=68 Identities=13% Similarity=0.078 Sum_probs=42.3
Q ss_pred ccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcE------EEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEc
Q 018248 179 SRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSL------LQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGL 252 (359)
Q Consensus 179 ~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 252 (359)
..+..++|+|+|.+.++ .+|. ++-.+..+.+. -..+-...- .....+.|.|+|.+.++ .||.|+-++-
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~-Ly~~~~~t~~~~~W~~s~t~IG~~Gw-~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDK-IYKGTPPTHDNDNWMGRAKKIGNGGW-NQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTE-EEEESCCCSTTCCHHHHCEEEECSCG-GGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCe-EEEECCCCCCcccccccccEeccccc-ccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 47889999999986666 6666 66666544211 111110001 12468899999998887 5687765553
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.66 E-value=1.8 Score=42.35 Aligned_cols=220 Identities=9% Similarity=0.050 Sum_probs=115.9
Q ss_pred CceEEEEEccCCCEEEEecCCceEEEEcCCCcce--eeeecccCCCCceeEEEEeccC------CEEEEEecCCCCCCeE
Q 018248 7 ITIHHLALNQDHGCFATGTETGFRVYLSDPYKPI--MRRDFDRNPRGGTQLVSMLFRS------NIICLVNSGPHQSNKV 78 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~------~~~~~~~~~~~~d~~i 78 (359)
..|.+.+.+. .+++.+.++.+..++++.++.. ....+ ...+.++++.+.+ +.+++... .|+++
T Consensus 514 ~~I~~As~n~--~~vvva~g~~l~~fel~~~~L~~~~~~~l----~~evscl~i~~~~~~~~~s~~~aVg~~---~d~tv 584 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAVGRALYYLQIHPQELRQISHTEM----EHEVACLDITPLGDSNGLSPLCAIGLW---TDISA 584 (1158)
T ss_dssp CCCCEEEECS--SEEEEEETTEEEEEEEETTEEEEEEEEEC----SSCEEEEECCCCSSSTTCCSEEEEEET---TTTEE
T ss_pred CEEEEEEeCC--CEEEEEECCEEEEEEeeCCceeeecccCC----CCceEEEEeecCCCCcccccEEEEEEC---CCCEE
Confidence 3455555443 3555555566777777654322 22333 5678888887543 34555442 37999
Q ss_pred EEEECCCccEEeeecc--CcceeEEEEec--ceeEEE---ecCeEEEEEc--ccceeeee--EeccCCCceeeeeecCCC
Q 018248 79 MIWDDHENRYLGELSF--RSEVKNVRLRR--DRIVVV---LNQKVYVYNF--TDLKLVDQ--IETVVNPTGLCDVSQNAG 147 (359)
Q Consensus 79 ~iwd~~~~~~~~~~~~--~~~v~~~~~~~--~~~~~~---~d~~i~i~d~--~~~~~~~~--~~~~~~~~~~~~~~~~~~ 147 (359)
+|+++.+.+.+..... .....++.+.. ...++. .||.+.-+.+ .+++.... ......++....+...+.
T Consensus 585 ~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~ 664 (1158)
T 3ei3_A 585 RILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLST 664 (1158)
T ss_dssp EEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSC
T ss_pred EEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCc
Confidence 9999987766654442 22444554432 233333 6888766655 34433221 222344566555655554
Q ss_pred ccEEEecCCCCeeEEEEecCCeeeEEeeccccccc-EEEEccC--CcEEEEEeCCCCeEEEEEcCCCc--EEEEeecCCC
Q 018248 148 PMVMACPGLLKGQVRVEDYGTKKSKYITAHASRIA-SIAMTLD--GRFVATASSKGTLIRVFNTMDGS--LLQEMRRGAE 222 (359)
Q Consensus 148 ~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~~~~i~-~~~~s~~--~~~l~~~~~dg~~i~iwd~~~~~--~~~~~~~~~~ 222 (359)
..++++ + +.-..++..+++.... .-.-..+. ...|+.. ..-++..+ ++. ++|..+.+.+ .++.+..
T Consensus 665 ~~V~a~-s--~rp~liy~~~~~l~~s-~l~~~~v~~~~~F~se~~~~g~v~~~-~~~-LrI~~i~~~~~~~~~~ipL--- 735 (1158)
T 3ei3_A 665 TNVFAC-S--DRPTVIYSSNHKLVFS-NVNLKEVNYMCPLNSDGYPDSLALAN-NST-LTIGTIDEIQKLHIRTVPL--- 735 (1158)
T ss_dssp EEEEEE-S--SSCEEEEESSSSEEEE-EBSSSCCCEEEEECCSSSTTEEEEEC-SSC-EEEEEECCSSSEEEEEEEC---
T ss_pred eeEEEE-C--CCCEEEEEcCCceEEe-ccChHHhceEeccCcccCCCcEEEEc-CCc-eEEEEecccCCeeEEEEeC---
Confidence 445554 3 3333333333332211 11112232 3345432 12344333 456 8888875433 3444543
Q ss_pred CcceEEEEecCCCCEEEEEcCC
Q 018248 223 RAEIYSLAFSSNAQWLAASSDK 244 (359)
Q Consensus 223 ~~~i~~~~~s~~~~~l~~~~~d 244 (359)
...+..++++|+.+.++.+..+
T Consensus 736 ~~Tprri~y~~~~~~~~v~~~~ 757 (1158)
T 3ei3_A 736 YESPRKICYQEVSQCFGVLSSR 757 (1158)
T ss_dssp SSEEEEEEEEGGGTEEEEEEEE
T ss_pred CCCceEEEEcCCCCEEEEEEEe
Confidence 3578999999998877666543
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.63 E-value=0.68 Score=37.30 Aligned_cols=230 Identities=13% Similarity=0.099 Sum_probs=108.3
Q ss_pred cCCCEEEEec-C------CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC--CCCeEEEEECCCc
Q 018248 16 QDHGCFATGT-E------TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH--QSNKVMIWDDHEN 86 (359)
Q Consensus 16 ~~g~~l~~~~-d------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~--~d~~i~iwd~~~~ 86 (359)
-++.+++.|+ . ..+.+||..+.+-.....+. ........... ++.+.+.++... ....+.+||+.++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSIT---RKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTAD 88 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCS---SCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCC---hhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCCC
Confidence 3556777776 3 35788888765433222222 11111112222 345555554211 2356899998887
Q ss_pred c---EEeee--ccCcceeEEEEecceeEEE---e-----cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEe
Q 018248 87 R---YLGEL--SFRSEVKNVRLRRDRIVVV---L-----NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 87 ~---~~~~~--~~~~~v~~~~~~~~~~~~~---~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
+ ....- .....-.++... ++.+++ . ...+.+||+.+.+-...-..........+...+ +.+ ++.
T Consensus 89 ~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~-~~i-yv~ 165 (301)
T 2vpj_A 89 EDGVWYSVAPMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVAS-GVI-YCL 165 (301)
T ss_dssp TTCCCEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEET-TEE-EEE
T ss_pred CCCeeEECCCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEEC-CEE-EEE
Confidence 6 33322 221112223333 444444 1 247899998765432221111111111222223 333 344
Q ss_pred cCCC----CeeEEEEecCCeeeEEeecccc-c-ccEEEEccCCcEEEEEeCC-----CCeEEEEEcCCCcEEEEeecCCC
Q 018248 154 PGLL----KGQVRVEDYGTKKSKYITAHAS-R-IASIAMTLDGRFVATASSK-----GTLIRVFNTMDGSLLQEMRRGAE 222 (359)
Q Consensus 154 ~g~~----d~~v~~~~~~~~~~~~~~~~~~-~-i~~~~~s~~~~~l~~~~~d-----g~~i~iwd~~~~~~~~~~~~~~~ 222 (359)
.|.. ...+.+++.....-..+..... . -.+++ .-++++++.|+.+ .. +.+||+.+.+-...-.....
T Consensus 166 GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~-v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVA-LLNDHIYVVGGFDGTAHLSS-VEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCC-EEEEETTTTEEEEECCCSSC
T ss_pred CCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEE-EECCEEEEEeCCCCCcccce-EEEEeCCCCcEEECCCCCCc
Confidence 2321 2346666665544333321111 1 11222 2366777777654 45 89999987765433211111
Q ss_pred CcceEEEEecCCCCEEEEEcCC-----CcEEEEEccCCC
Q 018248 223 RAEIYSLAFSSNAQWLAASSDK-----GTVHVFGLKVDS 256 (359)
Q Consensus 223 ~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~ 256 (359)
......+.+ ++++++.|+.+ ..+.+||+++.+
T Consensus 244 r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 244 RCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 112222333 67777777755 357788887654
No 323
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.62 E-value=0.71 Score=37.43 Aligned_cols=211 Identities=9% Similarity=-0.027 Sum_probs=112.2
Q ss_pred EccCCCEEEEec---CCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC----------CCCeEEE
Q 018248 14 LNQDHGCFATGT---ETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH----------QSNKVMI 80 (359)
Q Consensus 14 ~s~~g~~l~~~~---d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~----------~d~~i~i 80 (359)
|+++|..|.... ++.|...+.+..... .+. ... +--+.++++.+.++..... ....|+.
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~---~l~---~~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~ 92 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIH---KLS---NDT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCR 92 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCE---EEE---EEE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCE---Ecc---CCc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEE
Confidence 346777776654 344555555433322 221 222 3345678888888864310 1356777
Q ss_pred EECCCccEEeeeccCcceeEEEEecceeEEE--e---cC--eEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEe
Q 018248 81 WDDHENRYLGELSFRSEVKNVRLRRDRIVVV--L---NQ--KVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 81 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~---d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
.++..++........ ...+++++..++ . ++ .|+..++. +.....+..+.. .+++|+++.++...
T Consensus 93 i~~dg~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~~~----~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 93 IKRNGHGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNHYL----FTCNTSDRYFYYNN 163 (302)
T ss_dssp EETTSCCCEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESSCC----CCSEEETTEEEEEC
T ss_pred EeCCCCcceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCCCc----eEeeEECCEEEEEe
Confidence 887666533222221 236677777666 3 23 45555553 333344433322 45688888754443
Q ss_pred cCCCCeeEEEEecCCeeeEEeecccccccEEEEccCCcEEEEEeCCC--CeEEEEEcCCCcEEEEeecCCCCcceEEEEe
Q 018248 154 PGLLKGQVRVEDYGTKKSKYITAHASRIASIAMTLDGRFVATASSKG--TLIRVFNTMDGSLLQEMRRGAERAEIYSLAF 231 (359)
Q Consensus 154 ~g~~d~~v~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~ 231 (359)
.....|++-..++...+.+.. +... ..+.|++.+|+-....+ . |..-++.... ...+.. ..+ ..|
T Consensus 164 --~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~-I~~~~ldG~~-~~~Lt~----~~~--~~~ 230 (302)
T 3s25_A 164 --PKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNA-IVHVNINNPN-PVVLTE----ANI--EHY 230 (302)
T ss_dssp --TTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTE-EEEECSSSCC-CEECSC----SCE--EEE
T ss_pred --CCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcE-EEEEECCCCC-eEEEeC----CCc--ceE
Confidence 245677776666655444432 2222 34669999887765443 3 5555654444 334432 233 347
Q ss_pred cCCCCEEEEEcC--CCcEEEEEccC
Q 018248 232 SSNAQWLAASSD--KGTVHVFGLKV 254 (359)
Q Consensus 232 s~~~~~l~~~~~--dg~i~iw~~~~ 254 (359)
+|++++|.-++. .+.|..-+++.
T Consensus 231 ~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 231 NVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEETTEEEEEECSSSCEEEEEETTS
T ss_pred EECCCEEEEEECCCCcEEEEEECCC
Confidence 888988876533 34455555544
No 324
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.51 E-value=1.6 Score=40.65 Aligned_cols=236 Identities=9% Similarity=0.004 Sum_probs=119.0
Q ss_pred CCceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccC------CCCceeEEEEeccCCEEEEEecCCCCCCeEE
Q 018248 6 PITIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRN------PRGGTQLVSMLFRSNIICLVNSGPHQSNKVM 79 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~ 79 (359)
...|.++.-..+|.+-+.. .+.+..++..+++......+..+ ....|. ++..+.+..+.++. ++-+.
T Consensus 323 ~~~v~~i~~D~~g~lWiGt-~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~--~i~~d~~g~lWigt----~~GL~ 395 (758)
T 3ott_A 323 GNQFYSLFRDSKGFYWFGG-ANGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIR--HIYEDKEQQLWIAT----DGSIN 395 (758)
T ss_dssp CCBEEEEEECTTCCEEEEE-TTEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEE--EEEECTTSCEEEEE----TTEEE
T ss_pred CceEEEEEEcCCCCEEEee-CCcceeecccccccceeEEeccCCcCCCCCCCceE--EEEECCCCCEEEEe----CCcHh
Confidence 3568888888888766544 34566666553221110111100 012234 34444444344442 36789
Q ss_pred EEECCCccEEeee--c-----cCcceeEEEEecceeEEE-e-cCeEEEEEcccc-----eee---eeEeccC--CCceee
Q 018248 80 IWDDHENRYLGEL--S-----FRSEVKNVRLRRDRIVVV-L-NQKVYVYNFTDL-----KLV---DQIETVV--NPTGLC 140 (359)
Q Consensus 80 iwd~~~~~~~~~~--~-----~~~~v~~~~~~~~~~~~~-~-d~~i~i~d~~~~-----~~~---~~~~~~~--~~~~~~ 140 (359)
.+|..+++...-. . ....|.++...+++.+.+ . .+-|.++|..+. ... ..+.... ....+.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 475 (758)
T 3ott_A 396 RYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFIN 475 (758)
T ss_dssp EEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEE
T ss_pred hcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceee
Confidence 9998776543321 1 123577888888777666 3 567899986431 111 1111111 111133
Q ss_pred eeecCCCccEEEecCCCCeeEEEEecCCeeeEEeecc----cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEE
Q 018248 141 DVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYITAH----ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQE 216 (359)
Q Consensus 141 ~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~ 216 (359)
++..+.++.+.+..+...|. ..++........+... ...+.++....+|.+.+ |+.. . +..||..+++.. .
T Consensus 476 ~i~~d~~g~lWi~~~t~~Gl-~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWi-gt~~-G-l~~~~~~~~~~~-~ 550 (758)
T 3ott_A 476 QIIPDNEGNVWVLLYNNKGI-DKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWV-GFHG-G-VMRINPKDESQQ-S 550 (758)
T ss_dssp EEEECTTSCEEEEETTCSSE-EEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEE-EETT-E-EEEECC--CCCC-B
T ss_pred eEEEcCCCCEEEEccCCCCc-EEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEE-EecC-c-eEEEecCCCceE-E
Confidence 34444444344311334564 4444444444444211 24567888888887654 4444 4 888987655432 1
Q ss_pred ee-cCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 217 MR-RGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 217 ~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
+. .+.....|.++... +|++. .++.+| |..+|.++.+
T Consensus 551 ~~~~gl~~~~i~~i~~~-~g~lW-i~t~~G-l~~~~~~~~~ 588 (758)
T 3ott_A 551 ISFGSFSNNEILSMTCV-KNSIW-VSTTNG-LWIIDRKTMD 588 (758)
T ss_dssp CCCCC---CCEEEEEEE-TTEEE-EEESSC-EEEEETTTCC
T ss_pred ecccCCCccceEEEEEC-CCCEE-EECCCC-eEEEcCCCce
Confidence 11 11123467787764 66544 455666 7788877654
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.31 E-value=0.65 Score=40.17 Aligned_cols=55 Identities=16% Similarity=0.216 Sum_probs=35.6
Q ss_pred ccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEE--EEeecC----CCCcceEEEEecCC
Q 018248 179 SRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLL--QEMRRG----AERAEIYSLAFSSN 234 (359)
Q Consensus 179 ~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~--~~~~~~----~~~~~i~~~~~s~~ 234 (359)
.....|+|.|+|+++++-...+. |++++..+++.. ..+... ........|+|+|+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~-I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGK-ILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCE-EEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCE-EEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 34579999999997766544456 888876555432 222211 02356789999995
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.29 E-value=0.91 Score=36.59 Aligned_cols=229 Identities=13% Similarity=0.126 Sum_probs=106.0
Q ss_pred CCCEEEEec-C----CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC--CCCeEEEEECCCccEE
Q 018248 17 DHGCFATGT-E----TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH--QSNKVMIWDDHENRYL 89 (359)
Q Consensus 17 ~g~~l~~~~-d----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~--~d~~i~iwd~~~~~~~ 89 (359)
++.+++.|+ + ..+.+||..+.+-.....+. ........... ++.+.+.++... .-..+.+||..+.+..
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELP---SRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCS---SCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCC---cccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCcee
Confidence 455677776 4 35788888765433222222 11111111122 455555554221 1256889998877544
Q ss_pred eeec--cCcceeEEEEecceeEEE--ec-----CeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCC---
Q 018248 90 GELS--FRSEVKNVRLRRDRIVVV--LN-----QKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL--- 157 (359)
Q Consensus 90 ~~~~--~~~~v~~~~~~~~~~~~~--~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--- 157 (359)
..-. ....-.++....+..+++ .+ ..+.+||+.+.+-...-..........+... ++.+ ++..|..
T Consensus 91 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i-yv~GG~~~~~ 168 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGLL-YAVGGYDVAS 168 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEE-EEECCEETTT
T ss_pred eCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCEE-EEEeCCCCCC
Confidence 3322 221122333333333333 22 3678888866543222111111111111222 3333 3332321
Q ss_pred ---CeeEEEEecCCeeeEEeec---ccccccEEEEccCCcEEEEEeCC-----CCeEEEEEcCCCcEEEEeecCCCCcce
Q 018248 158 ---KGQVRVEDYGTKKSKYITA---HASRIASIAMTLDGRFVATASSK-----GTLIRVFNTMDGSLLQEMRRGAERAEI 226 (359)
Q Consensus 158 ---d~~v~~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~d-----g~~i~iwd~~~~~~~~~~~~~~~~~~i 226 (359)
...+.+++.....-..+.. .... .+++. -++++++.|+.+ .. +.+||+.+.+-...-.........
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~~~~r~~~ 245 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSG-AGVGV-LNNLLYAVGGHDGPLVRKS-VEVYDPTTNAWRQVADMNMCRRNA 245 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEECCBSSSSBCCC-EEEEETTTTEEEEECCCSSCCBSC
T ss_pred CccccEEEEEeCCCCcEEECCCCcccccc-ccEEE-ECCEEEEECCCCCCcccce-EEEEeCCCCCEeeCCCCCCccccC
Confidence 1235566655543333221 1111 12222 367777777654 35 899999877544322111111111
Q ss_pred EEEEecCCCCEEEEEcCCC-----cEEEEEccCCC
Q 018248 227 YSLAFSSNAQWLAASSDKG-----TVHVFGLKVDS 256 (359)
Q Consensus 227 ~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~ 256 (359)
..+.+ ++++++.|+.++ .+.+||+++.+
T Consensus 246 ~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 246 GVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eEEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 22222 677777777553 48888888754
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.73 E-value=1.4 Score=35.72 Aligned_cols=230 Identities=10% Similarity=0.044 Sum_probs=106.5
Q ss_pred ccCCCEEEEec-C----CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecC----CC--CCCeEEEEEC
Q 018248 15 NQDHGCFATGT-E----TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSG----PH--QSNKVMIWDD 83 (359)
Q Consensus 15 s~~g~~l~~~~-d----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~----~~--~d~~i~iwd~ 83 (359)
.-++.+++.|+ + ..+.+||..+.+-.....+. ........... ++.+.+.++. .. ....+.+||+
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQ---VPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNP 97 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCS---SCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEET
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCC---cccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECC
Confidence 34667777776 3 35788888765433222222 11111111122 4555555542 10 1256889998
Q ss_pred CCccEEeeec--cCcceeEEEEecceeEEE---e-----cCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEe
Q 018248 84 HENRYLGELS--FRSEVKNVRLRRDRIVVV---L-----NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 84 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~~---~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (359)
.+++....-. ....-.++... ++.+++ . -..+.+||+.+.+-...-..........+... ++.+ ++.
T Consensus 98 ~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i-yv~ 174 (308)
T 1zgk_A 98 MTNQWSPCAPMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLL-YAV 174 (308)
T ss_dssp TTTEEEECCCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEE-EEE
T ss_pred CCCeEeECCCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEE-EEE
Confidence 8775443322 11111223333 344443 1 24688899866543221111111111112222 3333 333
Q ss_pred cCCC----CeeEEEEecCCeeeEEeec---ccccccEEEEccCCcEEEEEeCC-----CCeEEEEEcCCCcEEEEeecCC
Q 018248 154 PGLL----KGQVRVEDYGTKKSKYITA---HASRIASIAMTLDGRFVATASSK-----GTLIRVFNTMDGSLLQEMRRGA 221 (359)
Q Consensus 154 ~g~~----d~~v~~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~d-----g~~i~iwd~~~~~~~~~~~~~~ 221 (359)
.|.. ...+.+++.....-..+.. .......+.+ ++++++.|+.+ .. +.+||+.+.+-...-....
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~~~~~p~ 251 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNS-VERYDVETETWTFVAPMKH 251 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEECCCCSS
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccce-EEEEeCCCCcEEECCCCCC
Confidence 2322 1345566655543333221 1111122222 67777777654 45 8999988775443211111
Q ss_pred CCcceEEEEecCCCCEEEEEcCC-----CcEEEEEccCCC
Q 018248 222 ERAEIYSLAFSSNAQWLAASSDK-----GTVHVFGLKVDS 256 (359)
Q Consensus 222 ~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~ 256 (359)
.......+.+ ++++++.|+.+ ..+.+||+++.+
T Consensus 252 ~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 252 RRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 1111222222 67777777744 357788887654
No 328
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.57 E-value=1.7 Score=36.11 Aligned_cols=238 Identities=10% Similarity=0.037 Sum_probs=118.3
Q ss_pred ceEEEEEccCCC-EEEEecCCceEEEEcCCCcceeeeec---ccCCCCceeEEEEecc---CCEEEEEecCCCC----CC
Q 018248 8 TIHHLALNQDHG-CFATGTETGFRVYLSDPYKPIMRRDF---DRNPRGGTQLVSMLFR---SNIICLVNSGPHQ----SN 76 (359)
Q Consensus 8 ~v~~~~~s~~g~-~l~~~~d~~i~iw~~~~~~~~~~~~~---~~~h~~~v~~~~~~~~---~~~~~~~~~~~~~----d~ 76 (359)
....|+|.|+|+ ++++-..+.|++++.+.........+ ..........++++++ ...+.+....... ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 457899999999 66655588899888542111100111 0011234566777774 4444443211000 13
Q ss_pred eEEEEECCCc--c--EEe----eecc----CcceeEEEEecceeEEE--ec--------------CeEEEEEcccce---
Q 018248 77 KVMIWDDHEN--R--YLG----ELSF----RSEVKNVRLRRDRIVVV--LN--------------QKVYVYNFTDLK--- 125 (359)
Q Consensus 77 ~i~iwd~~~~--~--~~~----~~~~----~~~v~~~~~~~~~~~~~--~d--------------~~i~i~d~~~~~--- 125 (359)
.|..+++..+ + ... .+.. ......+.|.|+|.+.+ .+ +.|.-++.. ++
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d-G~~p~ 177 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ-GEIPD 177 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT-SCCCT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCC-CCCCC
Confidence 5666665432 1 111 1111 11246799999997666 22 456666653 22
Q ss_pred ----------eeeeEe-ccCCCceeeeeecCCCccEEEecCCCCeeEEEEecC-C-------------------------
Q 018248 126 ----------LVDQIE-TVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG-T------------------------- 168 (359)
Q Consensus 126 ----------~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~-~------------------------- 168 (359)
....+. ++.+ ..-++|.+....++++-.+. ++.=.|.... +
T Consensus 178 ~npf~~~~~~~~~i~a~G~rn-p~gl~~d~~~g~l~~~d~g~-~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~ 255 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIRN-PQGMAMNPWSNALWLNEHGP-RGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGE 255 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCSE-EEEEEEETTTTEEEEEEECS-BSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBS
T ss_pred CCCCcCCCCCCccEEEEcCcC-ccceEEECCCCCEEEEecCC-CCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCC
Confidence 111221 2222 34567777444444433221 1111221110 0
Q ss_pred ------eeeEEeecccccccEEEEcc-------CCcEEEEEeCCCCeEEEEEcCCCcEEEE--eecCCCCcceEEEEecC
Q 018248 169 ------KKSKYITAHASRIASIAMTL-------DGRFVATASSKGTLIRVFNTMDGSLLQE--MRRGAERAEIYSLAFSS 233 (359)
Q Consensus 169 ------~~~~~~~~~~~~i~~~~~s~-------~~~~l~~~~~dg~~i~iwd~~~~~~~~~--~~~~~~~~~i~~~~~s~ 233 (359)
.+...+. +...+..++|.. +|.++++.-..+. |...++..++.... +... ....+..+++.|
T Consensus 256 ~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~-v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~p 332 (353)
T 2g8s_A 256 IVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKD-VIVMSVNGDKVTEDGRILTD-RGQRIRDVRTGP 332 (353)
T ss_dssp SCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTE-EEEEEEETTEEEEEEEESGG-GCCCEEEEEECT
T ss_pred CCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCE-EEEEEeCCCeEeeeEEcccC-CCCceeEEEECC
Confidence 0111122 123456677763 4666666555666 88888776654332 2111 224789999999
Q ss_pred CCCEEEEEc-CCCcEEEEEcc
Q 018248 234 NAQWLAASS-DKGTVHVFGLK 253 (359)
Q Consensus 234 ~~~~l~~~~-~dg~i~iw~~~ 253 (359)
||.++++.. .+| +||.+.
T Consensus 333 dG~lyv~td~~~g--~I~ri~ 351 (353)
T 2g8s_A 333 DGYLYVLTDESSG--ELLKVS 351 (353)
T ss_dssp TSCEEEEECSTTE--EEEEEE
T ss_pred CCcEEEEEeCCCC--EEEEEe
Confidence 999766543 344 566553
No 329
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.54 E-value=1.1 Score=34.17 Aligned_cols=148 Identities=14% Similarity=0.019 Sum_probs=81.1
Q ss_pred cceeEEEEecceeEEE-ecCeEEEEEccccee------eeeEec-cCCCceeeeeecCCCccEEEecCCCCeeEEEEecC
Q 018248 96 SEVKNVRLRRDRIVVV-LNQKVYVYNFTDLKL------VDQIET-VVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYG 167 (359)
Q Consensus 96 ~~v~~~~~~~~~~~~~-~d~~i~i~d~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~ 167 (359)
..+..++|+|++.+.+ .+|.++-.+..+.+. -..+-. .-+....+.+.+++ .+.++ .||.|+-++..
T Consensus 41 ~~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G--~LYav---~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNG--YLYAV---SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTS--CEEEE---ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEecccccccceEEEECCCC--CEEEe---CCCEEEEeCCC
Confidence 3677999999998777 888877766544111 111110 11112445555555 34444 36888765432
Q ss_pred C--e------eeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCc------EEEEeecCCCCcceEEEEecC
Q 018248 168 T--K------KSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGS------LLQEMRRGAERAEIYSLAFSS 233 (359)
Q Consensus 168 ~--~------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~------~~~~~~~~~~~~~i~~~~~s~ 233 (359)
. . ....-..--..+..|.+.|+|.+.++. |+. ++-....++. ....+- ...-....-+.|.+
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~-lyr~~~P~~~~~~wl~~~~~~g-~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ-FYKALPPVSNQDNWLARATKIG-QGGWDTFKFLFFSS 191 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE-EEEECCCSSTTCCHHHHCEEEE-SSSGGGEEEEEECT
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc-EEecCCCCCCCcccccccceec-cCCcceEEEEEECC
Confidence 1 1 011111122467899999999877666 776 5433332211 111111 11122445577999
Q ss_pred CCCEEEEEcCCCcEEEEEccCCC
Q 018248 234 NAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 234 ~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
++.+.++. +| ++|.....+
T Consensus 192 ~G~l~~v~--~g--~~Y~~~~p~ 210 (236)
T 1tl2_A 192 VGTLFGVQ--GG--KFYEDYPPS 210 (236)
T ss_dssp TSCEEEEE--TT--EEEEESCCC
T ss_pred CCcEEEEe--CC--eEEecCCcc
Confidence 99887766 66 666665544
No 330
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.51 E-value=1.5 Score=35.23 Aligned_cols=174 Identities=12% Similarity=0.110 Sum_probs=81.4
Q ss_pred CCeEEEEECCCccEEeeec--cCcceeEEEEecceeEEE--e-----cCeEEEEEcccce-----eeeeEeccCCCceee
Q 018248 75 SNKVMIWDDHENRYLGELS--FRSEVKNVRLRRDRIVVV--L-----NQKVYVYNFTDLK-----LVDQIETVVNPTGLC 140 (359)
Q Consensus 75 d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~--~-----d~~i~i~d~~~~~-----~~~~~~~~~~~~~~~ 140 (359)
-..+.+||+.+++....-. ....-.++....+..+++ . -..+.+||+.+.+ .+..+.. ......
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~--~r~~~~ 107 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNV--RRGLAG 107 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSS--CCBSCE
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCC--Ccccee
Confidence 3578899988775443222 111112233333333333 1 2468999986654 2222211 111112
Q ss_pred eeecCCCccEEEecCCC----CeeEEEEecCCeeeEEeecc-ccc-ccEEEEccCCcEEEEEeCC-----CCeEEEEEcC
Q 018248 141 DVSQNAGPMVMACPGLL----KGQVRVEDYGTKKSKYITAH-ASR-IASIAMTLDGRFVATASSK-----GTLIRVFNTM 209 (359)
Q Consensus 141 ~~~~~~~~~~l~~~g~~----d~~v~~~~~~~~~~~~~~~~-~~~-i~~~~~s~~~~~l~~~~~d-----g~~i~iwd~~ 209 (359)
+... ++.+ ++..|.. ...+.+++.....-..+... ... -.+++. .++++++.|+.+ .. +.+||+.
T Consensus 108 ~~~~-~~~l-yv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~-~~~~d~~ 183 (301)
T 2vpj_A 108 ATTL-GDMI-YVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNS-VEKYDPH 183 (301)
T ss_dssp EEEE-TTEE-EEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCC-EEEEETT
T ss_pred EEEE-CCEE-EEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccce-EEEEeCC
Confidence 2222 3333 3432321 13456666555333332211 111 112222 367777777654 35 8899988
Q ss_pred CCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC-----CcEEEEEccCCC
Q 018248 210 DGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK-----GTVHVFGLKVDS 256 (359)
Q Consensus 210 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~ 256 (359)
+.+-...-...........+.+ ++++++.|+.+ ..+.+||+++.+
T Consensus 184 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 184 TGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp TTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 7764433211111111222333 56777777654 358888887654
No 331
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.98 E-value=1.6 Score=38.38 Aligned_cols=99 Identities=12% Similarity=0.088 Sum_probs=58.5
Q ss_pred CceEEEEEccCCCEEEEec--CCceEEEEcCCCcc-----------eeeeecccCCCCceeEEEEeccCCEEEEEecCCC
Q 018248 7 ITIHHLALNQDHGCFATGT--ETGFRVYLSDPYKP-----------IMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH 73 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 73 (359)
.....+..+|||+++++++ +.++.+++++.... ......+ -...-+...++++..++.+--
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e----~GlGPlHt~Fd~~G~aYTtlf-- 396 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE----LGLGPLHTTFDGRGNAYTTLF-- 396 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB----CCSCEEEEEECSSSEEEEEET--
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc----CCCcccEEEECCCCceEeeee--
Confidence 4456788999999998887 89999999874211 1112221 222333344455555555543
Q ss_pred CCCeEEEEECCCc----------cEEeeeccCcceeEEEE------ecceeEEE
Q 018248 74 QSNKVMIWDDHEN----------RYLGELSFRSEVKNVRL------RRDRIVVV 111 (359)
Q Consensus 74 ~d~~i~iwd~~~~----------~~~~~~~~~~~v~~~~~------~~~~~~~~ 111 (359)
-|..|.-|++... ..+..+....++-.+.. .|+|++++
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv 450 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLV 450 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEE
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEE
Confidence 5799999998653 34444543333333333 45777776
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.65 E-value=2.6 Score=34.84 Aligned_cols=22 Identities=5% Similarity=0.048 Sum_probs=13.9
Q ss_pred CCEEEEEecCCCCCCeEEEEECCC
Q 018248 62 SNIICLVNSGPHQSNKVMIWDDHE 85 (359)
Q Consensus 62 ~~~~~~~~~~~~~d~~i~iwd~~~ 85 (359)
++.+.+.++. ....+.++|+.+
T Consensus 19 ~~~iyv~GG~--~~~~~~~~d~~~ 40 (357)
T 2uvk_A 19 NDTVYIGLGS--AGTAWYKLDTQA 40 (357)
T ss_dssp TTEEEEECGG--GTTCEEEEETTS
T ss_pred CCEEEEEeCc--CCCeEEEEcccc
Confidence 4555555543 246799999864
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.53 E-value=2.4 Score=34.11 Aligned_cols=187 Identities=9% Similarity=0.079 Sum_probs=88.3
Q ss_pred CEEEEEecCCCCCCeEEEEECCCccEEeeec--cCcceeEEEEecceeEEE--e----cCeEEEEEcccceeeeeEeccC
Q 018248 63 NIICLVNSGPHQSNKVMIWDDHENRYLGELS--FRSEVKNVRLRRDRIVVV--L----NQKVYVYNFTDLKLVDQIETVV 134 (359)
Q Consensus 63 ~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~--~----d~~i~i~d~~~~~~~~~~~~~~ 134 (359)
+.+++.++.. ....+.+||..+++....-. ....-.++....+..+++ . -..+.+||+.+.+-...-....
T Consensus 12 ~~l~~~GG~~-~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 12 DYRIALFGGS-QPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp CEEEEEECCS-STTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred ceEEEEeCCC-CCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 4566666543 35789999988876443322 111112233333333333 2 2578899987664322211111
Q ss_pred CCceeeeeecCCCccEEEecCCC-----CeeEEEEecCCeeeEEeeccc-c-cccEEEEccCCcEEEEEeC---------
Q 018248 135 NPTGLCDVSQNAGPMVMACPGLL-----KGQVRVEDYGTKKSKYITAHA-S-RIASIAMTLDGRFVATASS--------- 198 (359)
Q Consensus 135 ~~~~~~~~~~~~~~~~l~~~g~~-----d~~v~~~~~~~~~~~~~~~~~-~-~i~~~~~s~~~~~l~~~~~--------- 198 (359)
......+... ++.+ ++..|.. ...+.+++.....-..+.... . .-.+++. -++++++.|+.
T Consensus 91 ~r~~~~~~~~-~~~i-yv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 91 PRDSLAACAA-EGKI-YTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CCBSCEEEEE-TTEE-EEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEE
T ss_pred cccceeEEEE-CCEE-EEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccc
Confidence 1111122222 3333 4443422 134666666554433332111 1 1112222 36676666653
Q ss_pred CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC-----CcEEEEEccCCC
Q 018248 199 KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK-----GTVHVFGLKVDS 256 (359)
Q Consensus 199 dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~ 256 (359)
-.. +.+||..+.+-...-........-..+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 168 ~~~-~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 168 LNS-CEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp CCC-EEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred cce-EEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 345 88999888754432211111111222223 66777777643 357888887654
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.46 E-value=2.8 Score=34.63 Aligned_cols=227 Identities=9% Similarity=0.006 Sum_probs=114.8
Q ss_pred CceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeecc---cCCCCceeEEEEecc---CCEEEEE-ecCCCCCCeE
Q 018248 7 ITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDFD---RNPRGGTQLVSMLFR---SNIICLV-NSGPHQSNKV 78 (359)
Q Consensus 7 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~---~~~~~~~-~~~~~~d~~i 78 (359)
..-+.|+|.|||+++++-. .|.|++++.+.++......+. .........++++|+ ...+.+. +.. .++.|
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~--~~~~v 109 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA--SDNRI 109 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS--SSEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC--CCCEE
Confidence 3457899999999998888 888999876554432222211 012344566777764 3334332 211 24566
Q ss_pred EEEECCCc----------cEE-eeec--cCcceeEEEEecceeEEE--e--------------cCeEEEEEccccee---
Q 018248 79 MIWDDHEN----------RYL-GELS--FRSEVKNVRLRRDRIVVV--L--------------NQKVYVYNFTDLKL--- 126 (359)
Q Consensus 79 ~iwd~~~~----------~~~-~~~~--~~~~v~~~~~~~~~~~~~--~--------------d~~i~i~d~~~~~~--- 126 (359)
.-|....+ +.+ ..+. ....-..+.|.|+|.+.+ . .+.|.-.+.. ++.
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~ 188 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPG 188 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTT
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCC
Confidence 66665441 111 1122 112345699999997666 2 2445444542 220
Q ss_pred -----eeeE-eccCCCceeeeeecCCCccEEEecCCCCeeEEEEe-cCC------------------eeeEEeecccccc
Q 018248 127 -----VDQI-ETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVED-YGT------------------KKSKYITAHASRI 181 (359)
Q Consensus 127 -----~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~-~~~------------------~~~~~~~~~~~~i 181 (359)
...+ .++.++ .-++|.|++. ++++-.| .++.-.|.. ..+ .++..+..+....
T Consensus 189 nPf~~~~i~a~G~RNp-~Gla~dp~G~-L~~~d~g-~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap 265 (347)
T 3das_A 189 NPFPGSPVYSYGHRNV-QGLAWDDKQR-LFASEFG-QDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASP 265 (347)
T ss_dssp CSSTTCCEEEBCCSBC-CEEEECTTCC-EEEEECC-SSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCE
T ss_pred CCCCCCeEEeeCCCCc-ceEEECCCCC-EEEEecC-CCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCC
Confidence 1111 233333 3467777543 3333222 232222211 111 1122222222344
Q ss_pred cEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEE---EEeecCCCCcceEEEEecCCCCEEEEEc
Q 018248 182 ASIAMTLDGRFVATASSKGTLIRVFNTMDGSLL---QEMRRGAERAEIYSLAFSSNAQWLAASS 242 (359)
Q Consensus 182 ~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 242 (359)
..++|. +|.++...-..+. |....+.....+ ..+..+ ....+..++..|||.++++..
T Consensus 266 ~G~~~~-~g~~~~~~l~~~~-l~~v~~~~~~~~~~~e~~l~~-~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 266 SGIAYA-EGSVWMAGLRGER-LWRIPLKGTAAAADPQAFLEG-EYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEE-TTEEEEEESTTCS-EEEEEEETTEESSCCEEESTT-TSSCEEEEEEEETTEEEEEEC
T ss_pred cceEEE-cCceeeccccCCE-EEEEEecCCceecceEEeecC-CCCCccEEEECCCCcEEEEEc
Confidence 567775 4555555555555 666666544321 122211 236799999999998776654
No 335
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.40 E-value=2.6 Score=34.04 Aligned_cols=175 Identities=8% Similarity=0.022 Sum_probs=79.5
Q ss_pred CCeEEEEECCCccEEeeec--cCcceeEEEEecceeEEE--e----c-----CeEEEEEcccceeeeeEeccCCCceeee
Q 018248 75 SNKVMIWDDHENRYLGELS--FRSEVKNVRLRRDRIVVV--L----N-----QKVYVYNFTDLKLVDQIETVVNPTGLCD 141 (359)
Q Consensus 75 d~~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~--~----d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 141 (359)
-..+.+||..+++....-. ....-.++....+..+++ . + ..+.+||+.+.+-...-..........+
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 3578999988776443322 111112233333333333 2 1 3588888866542221111111111112
Q ss_pred eecCCCccEEEecCCCC----eeEEEEecCCeeeEEeec---ccccccEEEEccCCcEEEEEeCC-----CCeEEEEEcC
Q 018248 142 VSQNAGPMVMACPGLLK----GQVRVEDYGTKKSKYITA---HASRIASIAMTLDGRFVATASSK-----GTLIRVFNTM 209 (359)
Q Consensus 142 ~~~~~~~~~l~~~g~~d----~~v~~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~d-----g~~i~iwd~~ 209 (359)
...+ +.+ ++..|... ..+.+++.....-..+.. ....-..+.+ ++++++.|+.+ .. +.+||+.
T Consensus 118 ~~~~-~~i-yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~ 192 (308)
T 1zgk_A 118 GVID-GHI-YAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNS-AECYYPE 192 (308)
T ss_dssp EEET-TEE-EEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCC-EEEEETT
T ss_pred EEEC-CEE-EEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCce-EEEEeCC
Confidence 2222 333 33323211 245555555433333221 1111122222 66777777654 35 8899987
Q ss_pred CCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC-----CcEEEEEccCCC
Q 018248 210 DGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK-----GTVHVFGLKVDS 256 (359)
Q Consensus 210 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~ 256 (359)
+.+-...-........-..+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 193 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 193 RNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 7654322111111112222333 67777777654 458888887654
No 336
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.39 E-value=2.6 Score=33.96 Aligned_cols=229 Identities=9% Similarity=0.072 Sum_probs=106.9
Q ss_pred CCEEEEec-C--CceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC-CCCeEEEEECCCccEEeeec
Q 018248 18 HGCFATGT-E--TGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH-QSNKVMIWDDHENRYLGELS 93 (359)
Q Consensus 18 g~~l~~~~-d--~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~~ 93 (359)
+.+++.|+ + ..+.+||..+.+-.....+. ........... ++.+.+.++... .-..+.+||+.+++....-.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPF---EKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCS---CCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCC---cccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 34556666 3 56888888765433222222 11111111222 444555554210 23678999988875443322
Q ss_pred --cCcceeEEEEecceeEEE--ec------CeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCC------
Q 018248 94 --FRSEVKNVRLRRDRIVVV--LN------QKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL------ 157 (359)
Q Consensus 94 --~~~~v~~~~~~~~~~~~~--~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~------ 157 (359)
....-.++....+..+++ .+ ..+.+||..+.+-...-..........+... ++.++ +..|..
T Consensus 88 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iy-v~GG~~~~~~~~ 165 (306)
T 3ii7_A 88 PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NGLIY-VCGGSLGNNVSG 165 (306)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEE-EECCEESCTTTC
T ss_pred CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CCEEE-EECCCCCCCCcc
Confidence 111112233333333333 22 4688999876543222111111111112222 33333 332321
Q ss_pred --CeeEEEEecCCeeeEEeecccc--cccEEEEccCCcEEEEEeCC-----CCeEEEEEcCCCcEEEEeecCCCCcceEE
Q 018248 158 --KGQVRVEDYGTKKSKYITAHAS--RIASIAMTLDGRFVATASSK-----GTLIRVFNTMDGSLLQEMRRGAERAEIYS 228 (359)
Q Consensus 158 --d~~v~~~~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~d-----g~~i~iwd~~~~~~~~~~~~~~~~~~i~~ 228 (359)
...+.+++.....-..+..... .-.+++. -++++++.|+.+ .. +.+||+.+.+-...-...........
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVF-VKDKIFAVGGQNGLGGLDN-VEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTEEBCC-EEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred cccceEEEeCCCCCeEEECCCccchhhcceEEE-ECCEEEEEeCCCCCCCCce-EEEeeCCCCcEEECCCCCCCccceeE
Confidence 2345566665544333322111 1112222 266777776643 35 89999887654322111111112233
Q ss_pred EEecCCCCEEEEEcCC-----CcEEEEEccCCC
Q 018248 229 LAFSSNAQWLAASSDK-----GTVHVFGLKVDS 256 (359)
Q Consensus 229 ~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~ 256 (359)
+.+ ++++++.|+.+ ..+.+||+++.+
T Consensus 244 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 333 67788888754 457888887754
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.55 E-value=5.3 Score=35.33 Aligned_cols=73 Identities=10% Similarity=0.059 Sum_probs=53.7
Q ss_pred ccccEEEEccCCcEEEEEeC-CCCeEEEEEcCCC------c-------EEEEeecCCCCcceEEEEecCCCCEEEEEcCC
Q 018248 179 SRIASIAMTLDGRFVATASS-KGTLIRVFNTMDG------S-------LLQEMRRGAERAEIYSLAFSSNAQWLAASSDK 244 (359)
Q Consensus 179 ~~i~~~~~s~~~~~l~~~~~-dg~~i~iwd~~~~------~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 244 (359)
.....+.++|||+++++++. +.+ +.++|++.. + ...+.+. .-.....+|.++|.-..+.--|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLspt-vtV~d~~k~~~~~~~k~~~~~~~~~ae~e~---GlGPlHt~Fd~~G~aYTtlfid 398 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPT-CSMIAIDKLPDLFAGKLADPRDVIVGEPEL---GLGPLHTTFDGRGNAYTTLFID 398 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSB-EEEEEGGGHHHHHTTCCSCGGGGEEECCBC---CSCEEEEEECSSSEEEEEETTT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCe-EEEEEeehhhhhhhccccCcccceEeeccC---CCcccEEEECCCCceEeeeeec
Confidence 34567899999999887764 566 999998741 1 1333332 2367889999999666677789
Q ss_pred CcEEEEEccCC
Q 018248 245 GTVHVFGLKVD 255 (359)
Q Consensus 245 g~i~iw~~~~~ 255 (359)
..|.-|++...
T Consensus 399 SqvvkWni~~a 409 (638)
T 3sbq_A 399 SQVVKWNMEEA 409 (638)
T ss_dssp TEEEEEEHHHH
T ss_pred ceEEEEeccHH
Confidence 99999999763
No 338
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.13 E-value=4.5 Score=33.57 Aligned_cols=192 Identities=12% Similarity=0.093 Sum_probs=98.3
Q ss_pred ceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc-EEeeec----cCcceeEEEEecc----eeEEE--e----c---
Q 018248 52 GTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR-YLGELS----FRSEVKNVRLRRD----RIVVV--L----N--- 113 (359)
Q Consensus 52 ~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~-~~~~~~----~~~~v~~~~~~~~----~~~~~--~----d--- 113 (359)
....+++.+++. ++++. .++.|++++ .+++ .+..+. .......++++|+ +.+.+ . +
T Consensus 30 ~P~~ia~~pdG~-l~V~e----~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 30 VPWSIAPLGGGR-YLVTE----RPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CEEEEEEEETTE-EEEEE----TTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCeEEEEcCCCe-EEEEe----CCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 345667777665 33333 458999987 4554 222221 2346789999997 54444 3 2
Q ss_pred -CeEEEEEcccc-------eee-eeEec-cCCCceeeeeecCCCccEEEecCCC------------CeeEEEEecCCee-
Q 018248 114 -QKVYVYNFTDL-------KLV-DQIET-VVNPTGLCDVSQNAGPMVMACPGLL------------KGQVRVEDYGTKK- 170 (359)
Q Consensus 114 -~~i~i~d~~~~-------~~~-~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~------------d~~v~~~~~~~~~- 170 (359)
+.|..|+.... +.+ ..+.. ..+....++|.|++. ++++. |.. .|.|.-.+.++..
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~-G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITT-GDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEEC-CCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEE-CCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 57777876443 111 11221 112335688888874 45443 421 2344444444431
Q ss_pred --------eEEeecccccccEEEEcc-CCcEEEEEeCCCCeEEEEEcCCCc------------------EEEEeecCCCC
Q 018248 171 --------SKYITAHASRIASIAMTL-DGRFVATASSKGTLIRVFNTMDGS------------------LLQEMRRGAER 223 (359)
Q Consensus 171 --------~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~~i~iwd~~~~~------------------~~~~~~~~~~~ 223 (359)
.....++. ....++|+| +|++.++-......=.|.-+..+. ++..+. . ..
T Consensus 182 ~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~-~~ 258 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTG-S-ET 258 (354)
T ss_dssp TTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-T-CC
T ss_pred CCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecC-C-CC
Confidence 11122333 356899999 666554432221101122222221 122221 1 12
Q ss_pred cceEEEEec-------CCCCEEEEEcCCCcEEEEEccC
Q 018248 224 AEIYSLAFS-------SNAQWLAASSDKGTVHVFGLKV 254 (359)
Q Consensus 224 ~~i~~~~~s-------~~~~~l~~~~~dg~i~iw~~~~ 254 (359)
.....++|. .+|+++++.-..+.|...+++.
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 357788883 4677777666667777777764
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.64 E-value=5 Score=33.10 Aligned_cols=50 Identities=18% Similarity=0.141 Sum_probs=25.7
Q ss_pred EEEEEcCCCcE--EEEeecCCCCcceEEEEecCCCCEEEEEcCCC------cEEEEEccCCC
Q 018248 203 IRVFNTMDGSL--LQEMRRGAERAEIYSLAFSSNAQWLAASSDKG------TVHVFGLKVDS 256 (359)
Q Consensus 203 i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg------~i~iw~~~~~~ 256 (359)
+.+||+.+.+- +..+.. ....-.++. .++++++.|+.++ .|.++++++++
T Consensus 287 ~~~yd~~~~~W~~~~~~p~--~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 287 TDIHLWHNGKWDKSGELSQ--GRAYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp CEEEECC---CEEEEECSS--CCBSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred EEEEecCCCceeeCCCCCC--CcccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 78899876543 333332 111222232 3678888888543 35566777765
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.52 E-value=4.7 Score=32.58 Aligned_cols=66 Identities=6% Similarity=0.054 Sum_probs=36.8
Q ss_pred cCCcEEEEEeC-C-----CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCC-----cEEEEEccCCC
Q 018248 188 LDGRFVATASS-K-----GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKG-----TVHVFGLKVDS 256 (359)
Q Consensus 188 ~~~~~l~~~~~-d-----g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~ 256 (359)
.++++++.|+. + .. +.+||..+.+-...-........-..+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~-~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNK-MCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCC-EEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred ECCEEEEEeCCCCCCcccce-EEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 46677777765 2 35 89999887654322111101111222223 677777777554 47778877654
No 341
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.26 E-value=5.6 Score=32.95 Aligned_cols=96 Identities=10% Similarity=0.043 Sum_probs=50.8
Q ss_pred ceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCccEE---eeec-----cCcceeEEEEecc----eeEEE---e----
Q 018248 52 GTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENRYL---GELS-----FRSEVKNVRLRRD----RIVVV---L---- 112 (359)
Q Consensus 52 ~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~---~~~~-----~~~~v~~~~~~~~----~~~~~---~---- 112 (359)
....+++.++++.++++. ..+.|++++. .++.. ..+. .......++++|+ +.+.+ .
T Consensus 19 ~P~~i~~~pdG~~l~V~e----~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITL----RGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp SEEEEEECSTTCCEEEEE----TTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CcEEEEEcCCCCEEEEEe----CCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 345677777776444444 4589999984 33322 1111 2345688999994 44444 2
Q ss_pred ---cCeEEEEEcccc----eeeee-Eec------cCCCceeeeeecCCCccEEEe
Q 018248 113 ---NQKVYVYNFTDL----KLVDQ-IET------VVNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 113 ---d~~i~i~d~~~~----~~~~~-~~~------~~~~~~~~~~~~~~~~~~l~~ 153 (359)
...|..+++... ..... +.. ..+....++|.|++ .++++.
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~ 147 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIAL 147 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEE
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEE
Confidence 235666666322 11111 111 11223468888887 455554
No 342
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.79 E-value=6.6 Score=31.40 Aligned_cols=175 Identities=12% Similarity=0.101 Sum_probs=79.1
Q ss_pred CeEEEEECCCccEEeeec--cCcceeEEEEecceeEEE--e-----cCeEEEEEcccceeeeeEeccCCCceeeeeecCC
Q 018248 76 NKVMIWDDHENRYLGELS--FRSEVKNVRLRRDRIVVV--L-----NQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNA 146 (359)
Q Consensus 76 ~~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~--~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (359)
..+..||+.+.+....-. ....-.++....+..+++ . -..+.+||..+.+-...-..........+... +
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~ 108 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-N 108 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-C
Confidence 568889988775433222 111112233333333333 1 24688899866543221111111111112222 3
Q ss_pred CccEEEecCCCC----eeEEEEecCCeeeEEeecccc--cccEEEEccCCcEEEEEeC-------CCCeEEEEEcCCCcE
Q 018248 147 GPMVMACPGLLK----GQVRVEDYGTKKSKYITAHAS--RIASIAMTLDGRFVATASS-------KGTLIRVFNTMDGSL 213 (359)
Q Consensus 147 ~~~~l~~~g~~d----~~v~~~~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~-------dg~~i~iwd~~~~~~ 213 (359)
+.++++ .|... ..+.+++.....-..+..... .-.+++. -++++++.|+. -.. +.+||+.+.+-
T Consensus 109 ~~iyv~-GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~-~~~yd~~~~~W 185 (302)
T 2xn4_A 109 GLLYAV-GGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLST-VECYNATTNEW 185 (302)
T ss_dssp TEEEEE-EEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCC-EEEEETTTTEE
T ss_pred CEEEEE-cCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccE-EEEEeCCCCcE
Confidence 333333 23221 234455555443333321111 1112222 36666666654 235 88999887754
Q ss_pred EEEeecCCCCcceEEEEecCCCCEEEEEcCC-----CcEEEEEccCCC
Q 018248 214 LQEMRRGAERAEIYSLAFSSNAQWLAASSDK-----GTVHVFGLKVDS 256 (359)
Q Consensus 214 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~ 256 (359)
...-...........+.+ ++++++.|+.+ ..+.+||+++.+
T Consensus 186 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred EECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 432211111112222233 67777777654 357888887654
No 343
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.29 E-value=10 Score=32.83 Aligned_cols=55 Identities=15% Similarity=0.236 Sum_probs=34.6
Q ss_pred ccccEEEEccCCc-EEEEEeCCCCeEEEEEcCCC---cEEEEeecC-------CCCcceEEEEecCC
Q 018248 179 SRIASIAMTLDGR-FVATASSKGTLIRVFNTMDG---SLLQEMRRG-------AERAEIYSLAFSSN 234 (359)
Q Consensus 179 ~~i~~~~~s~~~~-~l~~~~~dg~~i~iwd~~~~---~~~~~~~~~-------~~~~~i~~~~~s~~ 234 (359)
...+.|+|.|||. .|+++...|. |++++.... +.+..+... ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~-i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGY-VKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTE-EEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCce-EEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3457899999996 4555667888 999974322 122222210 01356889999996
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.07 E-value=9.2 Score=30.82 Aligned_cols=226 Identities=13% Similarity=0.102 Sum_probs=101.4
Q ss_pred EEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecC-----CC---CCCeEEEEECCCccEEeee
Q 018248 21 FATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSG-----PH---QSNKVMIWDDHENRYLGEL 92 (359)
Q Consensus 21 l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~-----~~---~d~~i~iwd~~~~~~~~~~ 92 (359)
++.|+ ..+.+||..+.+-.. ..+. .............++ .+.+.++. .. ....+..||..+++....-
T Consensus 8 ~~~GG-~~~~~yd~~~~~W~~-~~~~-~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 8 FMISE-EGAVAYDPAANECYC-ASLS-SQVPKNHVSLVTKEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEET-TEEEEEETTTTEEEE-EECC-CCSCSSEEEEECTTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEcC-CceEEECCCCCeEec-CCCC-CCCCccceEEEEECC-EEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 34454 578899988765432 2321 111222222333344 44444431 10 1123788898887643322
Q ss_pred ccC--cceeEEEEecceeEEE--ec--------CeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCC--
Q 018248 93 SFR--SEVKNVRLRRDRIVVV--LN--------QKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLK-- 158 (359)
Q Consensus 93 ~~~--~~v~~~~~~~~~~~~~--~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d-- 158 (359)
..+ ..-.++....+..+++ .+ ..+.+||..+.+-...-..+.......+... ++.+ ++..|..+
T Consensus 84 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i-yv~GG~~~~~ 161 (315)
T 4asc_A 84 PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH-MDLV-YVIGGKGSDR 161 (315)
T ss_dssp CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEE-EEECCBCTTS
T ss_pred CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE-CCEE-EEEeCCCCCC
Confidence 211 1112233333333333 11 4588999876542211111111111222222 3333 34434311
Q ss_pred ---eeEEEEecCCeeeEEeeccc-cc-ccEEEEccCCcEEEEEeCCC-----CeEEEEEcCCCcEEEEeecCCCCcceEE
Q 018248 159 ---GQVRVEDYGTKKSKYITAHA-SR-IASIAMTLDGRFVATASSKG-----TLIRVFNTMDGSLLQEMRRGAERAEIYS 228 (359)
Q Consensus 159 ---~~v~~~~~~~~~~~~~~~~~-~~-i~~~~~s~~~~~l~~~~~dg-----~~i~iwd~~~~~~~~~~~~~~~~~~i~~ 228 (359)
..+.+++.....-..+.... .. -.+++ .-++++++.|+.++ . +.+||+.+.+-...-...........
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~p~~r~~~~~ 239 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGAT-VHDGRIIVAAGVTDTGLTSS-AEVYSITDNKWAPFEAFPQERSSLSL 239 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEEEEECSSSEEEE-EEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEE-EECCEEEEEeccCCCCccce-EEEEECCCCeEEECCCCCCcccceeE
Confidence 34566665554333332111 11 11222 23677777777543 4 78899887754433221111112222
Q ss_pred EEecCCCCEEEEEcCCC--------------cEEEEEccCCC
Q 018248 229 LAFSSNAQWLAASSDKG--------------TVHVFGLKVDS 256 (359)
Q Consensus 229 ~~~s~~~~~l~~~~~dg--------------~i~iw~~~~~~ 256 (359)
+.+ ++++++.|+.++ .+.+||+++.+
T Consensus 240 ~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 240 VSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 333 667777777532 36677877654
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.63 E-value=7.6 Score=37.21 Aligned_cols=40 Identities=10% Similarity=0.080 Sum_probs=32.9
Q ss_pred CCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeec
Q 018248 6 PITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDF 45 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~ 45 (359)
...|.+++..++..++.+-+ |+++|+|++.+++......+
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 45688888889989987777 99999999998877665554
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=82.16 E-value=18 Score=29.08 Aligned_cols=66 Identities=14% Similarity=0.191 Sum_probs=36.4
Q ss_pred cCCcEEEEEeC------CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC-----CcEEEEEccCCC
Q 018248 188 LDGRFVATASS------KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK-----GTVHVFGLKVDS 256 (359)
Q Consensus 188 ~~~~~l~~~~~------dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~ 256 (359)
.++++++.|+. -.. +.+||..+.+-...-...........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~-~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNR-VFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp ETTEEEEECCEESSSCBCCC-EEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ECCEEEEEcCCCCCCCccce-EEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 46777777753 235 89999887764432211111111222222 66777777643 246778877654
No 347
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=80.90 E-value=7.1 Score=34.91 Aligned_cols=58 Identities=14% Similarity=0.207 Sum_probs=40.4
Q ss_pred cEEEEccCCcEEEEEeCC------------CCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEE
Q 018248 182 ASIAMTLDGRFVATASSK------------GTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAAS 241 (359)
Q Consensus 182 ~~~~~s~~~~~l~~~~~d------------g~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 241 (359)
-.|+|+|.|.+++.-..+ .. +.+.+..+++..+-+... ..+.++.++|+||++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~-~~~~~~~~g~~~rf~~~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQ-MLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCE-EEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccce-EEEEeCCCCeEEEEEeCC-CCccCcCeeECCCCCEEEEE
Confidence 568999999966554322 12 555666667766555543 56799999999999887764
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.64 E-value=9 Score=36.72 Aligned_cols=38 Identities=11% Similarity=0.126 Sum_probs=32.4
Q ss_pred cccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEee
Q 018248 180 RIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMR 218 (359)
Q Consensus 180 ~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~ 218 (359)
.+.+++..++..++++-+.|++ +|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~-LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCE-EEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCE-EEEEECCCCCeEeeec
Confidence 4566777788889999999999 9999999999888753
No 349
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=80.40 E-value=25 Score=29.47 Aligned_cols=164 Identities=8% Similarity=0.039 Sum_probs=88.2
Q ss_pred CeEEEEECCCc--cEEeeeccC-------cceeEEEEe---cc----eeEEE----ecCeEEEEEcccceeeeeEecc--
Q 018248 76 NKVMIWDDHEN--RYLGELSFR-------SEVKNVRLR---RD----RIVVV----LNQKVYVYNFTDLKLVDQIETV-- 133 (359)
Q Consensus 76 ~~i~iwd~~~~--~~~~~~~~~-------~~v~~~~~~---~~----~~~~~----~d~~i~i~d~~~~~~~~~~~~~-- 133 (359)
-+|.+||+.++ +.++.+..+ ..+..+++. |. +.++. ....|.++|+.+++.-+.+...
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 47999999999 999888632 346778877 22 22322 5678999999887765544211
Q ss_pred ----------------CCCceeeeeecC----CCccEEEecCCCCeeEEEE---ecCC---eeeEEeecccc---cccEE
Q 018248 134 ----------------VNPTGLCDVSQN----AGPMVMACPGLLKGQVRVE---DYGT---KKSKYITAHAS---RIASI 184 (359)
Q Consensus 134 ----------------~~~~~~~~~~~~----~~~~~l~~~g~~d~~v~~~---~~~~---~~~~~~~~~~~---~i~~~ 184 (359)
...+..++++|+ ++.+++.. -+....-+|- ..+. ..++.+ +.++ .-..+
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p-lss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~ 280 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLA-GSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIAL 280 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEE-SSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEE-CCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceE
Confidence 112344566665 33333332 2112222221 1111 112222 2222 22345
Q ss_pred EEc-cCCcEEEEEeCCCCeEEEEEcCC-C---cEEEEeecCCCCcceEEEEecCCCCEEEEEc
Q 018248 185 AMT-LDGRFVATASSKGTLIRVFNTMD-G---SLLQEMRRGAERAEIYSLAFSSNAQWLAASS 242 (359)
Q Consensus 185 ~~s-~~~~~l~~~~~dg~~i~iwd~~~-~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 242 (359)
++. .+|.++++--.... |..|+..+ . +....+.....-..+..+.+.++|.+.+..+
T Consensus 281 ~~D~~~G~ly~~~~~~~a-I~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQ-VSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EECTTTCEEEEEESSSSE-EEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred EEeCCCCeEEEEeccCCe-EEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 665 57776666666777 99999765 1 1222332211234577777777776555543
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.29 E-value=28 Score=30.07 Aligned_cols=105 Identities=10% Similarity=0.062 Sum_probs=57.0
Q ss_pred ceeeeeecCCCccEEEecCCCCeeEEEEecCCe----eeEEee---------cccccccEEEEccC----CcEEEEEeC-
Q 018248 137 TGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK----KSKYIT---------AHASRIASIAMTLD----GRFVATASS- 198 (359)
Q Consensus 137 ~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~----~~~~~~---------~~~~~i~~~~~s~~----~~~l~~~~~- 198 (359)
...+++.|++...++++. ..|.|++.+.++. .+..+. ........|+|+|+ +.+.++-+.
T Consensus 16 P~~~a~~pdG~~rl~V~e--r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILE--KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp EEEEECCSSSSCCEEEEE--TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred ceEEEECCCCCeEEEEEe--CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 356788888863334432 5788888755432 122221 11356788999996 443333221
Q ss_pred -C----------CCeEEEEEcCC----------CcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC
Q 018248 199 -K----------GTLIRVFNTMD----------GSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK 244 (359)
Q Consensus 199 -d----------g~~i~iwd~~~----------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 244 (359)
+ .. |.-|.+.. .+.+..+........-..|+|.|||.+.++.++.
T Consensus 94 ~~~~~~~~~~~~~~-v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILR-VVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEE-EEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceE-EEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 13 44465532 1233333311112246889999999887776653
No 351
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=78.63 E-value=40 Score=30.92 Aligned_cols=197 Identities=11% Similarity=0.060 Sum_probs=91.2
Q ss_pred cCCCEEEEec-C----CceEEEEcCCCcceeee-eccc--CCCCceeEEEEecc-CCEEEEEecCCCC---CCeEEEEEC
Q 018248 16 QDHGCFATGT-E----TGFRVYLSDPYKPIMRR-DFDR--NPRGGTQLVSMLFR-SNIICLVNSGPHQ---SNKVMIWDD 83 (359)
Q Consensus 16 ~~g~~l~~~~-d----~~i~iw~~~~~~~~~~~-~~~~--~h~~~v~~~~~~~~-~~~~~~~~~~~~~---d~~i~iwd~ 83 (359)
.++.+++.|+ + +.+.+||..+.+-.... .+.. .............. ++.+.+.+|.... -..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 5677778877 4 34788888765443322 2100 00111111122221 4445555543211 246889998
Q ss_pred CCccEEeeec--cCcceeEEEEecceeEEE-----ecCeEEEEEcccceeeeeEe-----ccCCCceeeeeecCCCccEE
Q 018248 84 HENRYLGELS--FRSEVKNVRLRRDRIVVV-----LNQKVYVYNFTDLKLVDQIE-----TVVNPTGLCDVSQNAGPMVM 151 (359)
Q Consensus 84 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~~-----~d~~i~i~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l 151 (359)
.+.+....-. ....-.++....++.+++ .++.+.+||..+.+-...-. ........+.+....+.+ +
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i-y 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG-I 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE-E
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE-E
Confidence 8865443322 222222333323555555 12279999987654322111 111111123333332333 4
Q ss_pred EecCCC-C-----eeEEEEecCCee------eEEeecc--cc-cccEEEEccCCcEEEEEeC--------CCCeEEEEEc
Q 018248 152 ACPGLL-K-----GQVRVEDYGTKK------SKYITAH--AS-RIASIAMTLDGRFVATASS--------KGTLIRVFNT 208 (359)
Q Consensus 152 ~~~g~~-d-----~~v~~~~~~~~~------~~~~~~~--~~-~i~~~~~s~~~~~l~~~~~--------dg~~i~iwd~ 208 (359)
+.+|.. + ..+.+++..... -..+... .. .-.+++...++++++.|+. ... |.+||+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS-IISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS-EEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe-EEEEEC
Confidence 443421 2 346666655443 2222211 11 1123333344777777774 345 899999
Q ss_pred CCCcEE
Q 018248 209 MDGSLL 214 (359)
Q Consensus 209 ~~~~~~ 214 (359)
.+.+-.
T Consensus 634 ~t~~W~ 639 (695)
T 2zwa_A 634 LSETLT 639 (695)
T ss_dssp TTTEEE
T ss_pred CCCeEE
Confidence 887654
No 352
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=77.72 E-value=25 Score=27.95 Aligned_cols=221 Identities=12% Similarity=0.064 Sum_probs=107.0
Q ss_pred ceEEEEEccCCCEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCcc
Q 018248 8 TIHHLALNQDHGCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHENR 87 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 87 (359)
.|..++....-.. +.. |+.+..|-.+.....-..... ...+..++. .....+... |+.|..|-.....
T Consensus 25 ~i~~ia~G~~h~~-~l~-~G~v~~wG~n~~Gqlg~p~~~---~~~i~~ia~--G~~hs~~l~-----~G~v~~wG~n~~G 92 (282)
T 3qhy_B 25 GVDAIAGGYFHGL-ALK-GGKVLGWGANLNGQLTMPAAT---QSGVDAIAA--GNYHSLALK-----DGEVIAWGGNEDG 92 (282)
T ss_dssp SCCEEEECSSEEE-EEE-TTEEEEEECCSSSTTSCCGGG---GSCCCEEEE--CSSEEEEEE-----TTEEEEEECCTTS
T ss_pred CCcEEEeCCCeEE-EEE-CCEEEEEeCCCCCCCCCCccC---CCCEEEEEe--CCCEEEEEE-----CCEEEEeeCCCCC
Confidence 5666665544333 333 888888876643222111110 223433332 333333333 4889999754322
Q ss_pred EEee-eccCcceeEEEEecceeEEEecCeEEEEEccc-ceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEe
Q 018248 88 YLGE-LSFRSEVKNVRLRRDRIVVVLNQKVYVYNFTD-LKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVED 165 (359)
Q Consensus 88 ~~~~-~~~~~~v~~~~~~~~~~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~ 165 (359)
.+.. ......|..++.......++.+|.|+.|-... ++.-.... ... .+..++..... .++. .+|.++.|-
T Consensus 93 qlg~P~~~~~~v~~ia~G~~hs~al~~G~v~~wG~n~~gqlg~~~~-~~~--~i~~i~~G~~~-~~~l---~~G~v~~wG 165 (282)
T 3qhy_B 93 QTTVPAEARSGVDAIAAGAWASYALKDGKVIAWGDDSDGQTTVPAE-AQS--GVTALDGGVYT-ALAV---KNGGVIAWG 165 (282)
T ss_dssp TTCCCGGGSSSEEEEEEETTEEEEEETTEEEEEECCTTSTTSCCGG-GGS--SEEEEEECSSE-EEEE---ETTEEEEEE
T ss_pred CCCCCcccCCCeEEEECcCCEEEEEeCCeEEEecCCCCCcCCCCcc-CCC--CeEEEEcccCE-EEEE---ECCEEEEec
Confidence 1111 11345677777766655444699999997643 22211111 111 22333333332 2333 267888876
Q ss_pred cCCe-eeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEcCC
Q 018248 166 YGTK-KSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDK 244 (359)
Q Consensus 166 ~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 244 (359)
.... .+..-..-...|..++...+. .++. .+|. |+.|-......+. +... ....|..++-..+....++ |
T Consensus 166 ~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~-v~~wG~n~~gqlg-~p~~-~~~~v~~i~~G~~h~~al~---~ 236 (282)
T 3qhy_B 166 DNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGK-VIAWGDNRYKQTT-VPTE-ALSGVSAIASGEWYSLALK---N 236 (282)
T ss_dssp CCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTE-EEEEECCTTSTTC-CCGG-GGSSCCEEEECSSCEEEEE---T
T ss_pred CCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCe-EEEEECCCCCCCC-CCcc-cCCCceEEEcCCCEEEEEE---C
Confidence 5431 110001112346666554332 2333 5888 9999654321111 1110 1235777776554433333 8
Q ss_pred CcEEEEEccCCC
Q 018248 245 GTVHVFGLKVDS 256 (359)
Q Consensus 245 g~i~iw~~~~~~ 256 (359)
|.|+.|-.....
T Consensus 237 g~v~~wG~n~~g 248 (282)
T 3qhy_B 237 GKVIAWGSSRTA 248 (282)
T ss_dssp TEEEEESTTCCC
T ss_pred CEEEEecCCCCc
Confidence 999999776544
No 353
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=76.47 E-value=15 Score=32.68 Aligned_cols=61 Identities=13% Similarity=0.183 Sum_probs=41.2
Q ss_pred cccEEEEccCCcEEEEEeC------------CCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCCCEEEEEc
Q 018248 180 RIASIAMTLDGRFVATASS------------KGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNAQWLAASS 242 (359)
Q Consensus 180 ~i~~~~~s~~~~~l~~~~~------------dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 242 (359)
....|.|.++|.+.++... ... |..++..+++....+.. .....++.++|+||++.|.++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~-v~~~dp~tGel~~fl~~-P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQ-MLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCE-EEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCce-EEEEeCCCCeEEEEEeC-CCCccccCCEECCCCCEEEEEE
Confidence 3457899999987663321 114 66677667776555542 1346799999999999887653
No 354
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=74.26 E-value=37 Score=28.31 Aligned_cols=59 Identities=5% Similarity=0.023 Sum_probs=30.5
Q ss_pred cccEEEEccC-CcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCC---cceEEEEecCC-CCEEEEE
Q 018248 180 RIASIAMTLD-GRFVATASSKGTLIRVFNTMDGSLLQEMRRGAER---AEIYSLAFSSN-AQWLAAS 241 (359)
Q Consensus 180 ~i~~~~~s~~-~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~-~~~l~~~ 241 (359)
.+.++.+.|+ ...|..+...+ |...+ ..++.-..+...... ..+..++++|. ...|..+
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g--l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG--IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE--EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred ceeEEEECCCCCCEEEEEcCCe--EEEeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 4788999886 34565665443 55544 234443333321111 34567888763 3334333
No 355
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=73.12 E-value=45 Score=28.71 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=25.9
Q ss_pred CcEEEeeecccCC-EEEEEecCCeEE------EEEeCCCCCCceEEeee
Q 018248 308 NVQYLVGFGRQNN-TIVIVGLDGSYY------KCEFDPMKGGEMHQLEH 349 (359)
Q Consensus 308 ~~v~~~~~s~~~~-~l~~~~~dg~i~------v~~~~~~~~~~~~~~~~ 349 (359)
+.+..+++.|||. ++++.+..|.++ +|++.. .+.+...++
T Consensus 405 ~R~~dv~~gpDG~~Lyv~~d~~G~i~~~~~~~~~~~~~--~~~i~~~~~ 451 (454)
T 1cru_A 405 NRYRDVIASPDGNVLYVLTDTAGNVQKDDGSVTNTLEN--PGSLIKFTY 451 (454)
T ss_dssp SCEEEEEECTTSSCEEEEECSSCCEECTTSCEECCCSS--TTCEEEEC-
T ss_pred CCceeEEECCCCCEEEEEECCCCCCccCCCceeEeccC--CCceEEEEE
Confidence 5778899999998 555555567665 566543 455655543
No 356
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=72.56 E-value=34 Score=27.09 Aligned_cols=74 Identities=19% Similarity=0.220 Sum_probs=47.2
Q ss_pred cccccEEEEcc-CCcEEEEEeCCCCeEEEEEcCCCc------EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEE
Q 018248 178 ASRIASIAMTL-DGRFVATASSKGTLIRVFNTMDGS------LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVF 250 (359)
Q Consensus 178 ~~~i~~~~~s~-~~~~l~~~~~dg~~i~iwd~~~~~------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 250 (359)
...|..+.... +..+++..+.+|. ++-..+.... ....++ ....+..+........|+..+..|.+..+
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~-iKr~~l~~~~~~~~G~~~i~lk---egD~l~~~~~~~~~~~ill~T~~G~~~r~ 142 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGY-VKKIPLAEFEYKAQGMPIIKLT---EGDEVVSIASSVDETHILLFTKKGRVARF 142 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSE-EEEEEGGGTTTCSTTEECSCCC---TTCCEEEEEECCSSCEEEEEETTSEEEEE
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCE-EEEEEHHHhhhhcCCeEEEecC---CCCEEEEEEEeCCCCEEEEEECCCEEEEE
Confidence 34455553321 4678899999998 9988865432 111222 22456666655566678888999998888
Q ss_pred EccCC
Q 018248 251 GLKVD 255 (359)
Q Consensus 251 ~~~~~ 255 (359)
+...-
T Consensus 143 ~~~ei 147 (276)
T 3no0_A 143 SVREV 147 (276)
T ss_dssp EGGGS
T ss_pred EhhhC
Confidence 77653
No 357
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=71.23 E-value=41 Score=27.45 Aligned_cols=113 Identities=14% Similarity=0.200 Sum_probs=0.0
Q ss_pred cCCcEEEEEeCCCCeEEEEEcCC-------CcEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCCCCCC
Q 018248 188 LDGRFVATASSKGTLIRVFNTMD-------GSLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDSGSPG 260 (359)
Q Consensus 188 ~~~~~l~~~~~dg~~i~iwd~~~-------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 260 (359)
++..+++..+.+|. |+--.+.. |.....++ ....+..+........|+..+..|.+..+.+..++
T Consensus 107 ~~e~~~v~~T~~G~-iKr~~l~~~~~~~r~G~~~i~lk---e~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~e---- 178 (327)
T 3uc1_A 107 TDAPYLVLATRNGL-VKKSKLTDFDSNRSGGIVAVNLR---DNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEA---- 178 (327)
T ss_dssp TSSSEEEEEETTSE-EEEEEGGGGCCCCSSCEESCBCC---TTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTT----
T ss_pred CCCCEEEEEcCCCE-EEEeEHHHhhccccCceEEEEEC---CCCEEEEEEEecCCCEEEEEECCCeEEEEECcccc----
Q ss_pred CCccccCCCCCccCCCCCceeeeeEeeeecceEEecccceeEEeecC-CcEEEeeecccCCEEEEEecCCeEEEEEeC
Q 018248 261 TSKLHSASEPNLSSKNSSAISSFRFIRGVLPKYFSSKWSMAQFRLPE-NVQYLVGFGRQNNTIVIVGLDGSYYKCEFD 337 (359)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~v~~~~ 337 (359)
+|..-....-...+++.. +.|..+...+++..|+.++..|.++.-.+.
T Consensus 179 -----------------------------ip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 179 -----------------------------LRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp -----------------------------SCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred -----------------------------cCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.29 E-value=60 Score=29.81 Aligned_cols=32 Identities=19% Similarity=0.440 Sum_probs=26.6
Q ss_pred eccCCEEEEEecCCCCCCeEEEEECCCccEEeeecc
Q 018248 59 LFRSNIICLVNSGPHQSNKVMIWDDHENRYLGELSF 94 (359)
Q Consensus 59 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~ 94 (359)
.++...+++++ .|.++|+|++.+++++.....
T Consensus 228 ~~~~~fLftL~----~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLT----QNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEE----TTCEEEEEETTTTEEEEEEET
T ss_pred ccCCcEEEEEE----cCCeEEEEEcCCCceEEeecc
Confidence 45677888888 899999999999998887763
No 359
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=63.24 E-value=92 Score=28.56 Aligned_cols=192 Identities=6% Similarity=0.026 Sum_probs=90.8
Q ss_pred CCEEEEEecCC-CCCCeEEEEECCCccEEeee--------ccCcceeEEEEec-ceeEEE---e------cCeEEEEEcc
Q 018248 62 SNIICLVNSGP-HQSNKVMIWDDHENRYLGEL--------SFRSEVKNVRLRR-DRIVVV---L------NQKVYVYNFT 122 (359)
Q Consensus 62 ~~~~~~~~~~~-~~d~~i~iwd~~~~~~~~~~--------~~~~~v~~~~~~~-~~~~~~---~------d~~i~i~d~~ 122 (359)
++.+.+.+|.. ..-..+.+||..+++....- .....-.++...+ ++.+++ . -+.+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 34455555421 02356889998887544332 1111223344442 454444 1 1368889987
Q ss_pred cceeeeeEeccCCCceeeeeecCCCccEEEecCCCC-eeEEEEecCCeeeEEeec------ccccccEEEEccC-CcEEE
Q 018248 123 DLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLK-GQVRVEDYGTKKSKYITA------HASRIASIAMTLD-GRFVA 194 (359)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d-~~v~~~~~~~~~~~~~~~------~~~~i~~~~~s~~-~~~l~ 194 (359)
+.+-...-..........+....++.+ ++.+|... +.+.+++.....-..+.. ......++.+..+ +++++
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~i-yv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNV-LILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCE-EEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEE-EEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 643222111111111112222123333 44434222 256667766544443332 1222334555655 66777
Q ss_pred EEeC--C-----CCeEEEEEcCCCcE-----EEEeec--CCCCcceEEEEecCCCCEEEEEcCC--------CcEEEEEc
Q 018248 195 TASS--K-----GTLIRVFNTMDGSL-----LQEMRR--GAERAEIYSLAFSSNAQWLAASSDK--------GTVHVFGL 252 (359)
Q Consensus 195 ~~~~--d-----g~~i~iwd~~~~~~-----~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~d--------g~i~iw~~ 252 (359)
.|+. + .. +.+||+.+.+. -..+.. ........ ++...++++++.|+.+ ..+.+||+
T Consensus 556 ~GG~~~~~~~~~~~-v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 556 LGGGFMDQTTVSDK-AIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp ECCBCTTSSCBCCE-EEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred ECCcCCCCCeeeCc-EEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 7765 2 34 88999988761 112211 00111222 2233337777777742 45888888
Q ss_pred cCCC
Q 018248 253 KVDS 256 (359)
Q Consensus 253 ~~~~ 256 (359)
.+.+
T Consensus 634 ~t~~ 637 (695)
T 2zwa_A 634 LSET 637 (695)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 7754
No 360
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=62.49 E-value=68 Score=26.77 Aligned_cols=188 Identities=15% Similarity=0.160 Sum_probs=90.1
Q ss_pred EEEeccCCEEEEEecCCCCCCeEEEEECCCc--------c---EEeeec--cCcceeEEEEecce--eEEE-ecCeEEEE
Q 018248 56 VSMLFRSNIICLVNSGPHQSNKVMIWDDHEN--------R---YLGELS--FRSEVKNVRLRRDR--IVVV-LNQKVYVY 119 (359)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~--------~---~~~~~~--~~~~v~~~~~~~~~--~~~~-~d~~i~i~ 119 (359)
+.++-.....+++. .||.|..|-.... + ....+. ....+..++++... .+++ .+|.|+.|
T Consensus 56 ~~i~~G~~~~~~l~----~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~w 131 (389)
T 3kci_A 56 VQLIGGEQTLFAVT----ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSW 131 (389)
T ss_dssp EEEEEETTEEEEEE----TTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEE
T ss_pred EEEEeCCCeEEEEc----CCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEE
Confidence 33443445555555 6899999964321 1 111111 12234444554332 2333 79999999
Q ss_pred Eccc-ce----------eeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEecCCe------------eeEEeec
Q 018248 120 NFTD-LK----------LVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTK------------KSKYITA 176 (359)
Q Consensus 120 d~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~------------~~~~~~~ 176 (359)
-... ++ ....+... ....+..++......+++. .+|.|+.|-.... ....+..
T Consensus 132 G~n~~GqLG~g~~~~~~~p~~v~~l-~~~~i~~va~G~~hs~alt---~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~ 207 (389)
T 3kci_A 132 GEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVT---AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 207 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGG-TTSCEEEEEECSSEEEEEE---TTSCEEEEECCGGGTTCSSSCCCEEEEEECGG
T ss_pred eCCCCCcCCCCCCccCcCCeEeccc-CCCeEEEEEeCcCeEEEEe---CCCeEEEeCCCCCCCcCCCCCcccccceEecc
Confidence 6522 11 11111111 1123344444333333333 5888888865420 1111111
Q ss_pred -ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCC-C---------cEE-EEeecCCCCcceEEEEecCCCCEEEEEcCC
Q 018248 177 -HASRIASIAMTLDGRFVATASSKGTLIRVFNTMD-G---------SLL-QEMRRGAERAEIYSLAFSSNAQWLAASSDK 244 (359)
Q Consensus 177 -~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~-~---------~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 244 (359)
....|..++......+.+.-..+|. |+.|-... + ... ..+.. .....|..++...+ ..+.-..+
T Consensus 208 ~~~~~v~~ia~G~g~~~t~~l~~~G~-v~~wG~n~~GqLG~g~~~~~~~p~~v~~-~~~~~v~~v~~G~~--hs~alt~~ 283 (389)
T 3kci_A 208 LQGHRVVDIACGSGDAQTLCLTDDDT-VWSWGDGDYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQ--FSVALTKS 283 (389)
T ss_dssp GTTSCEEEEEECCSSCEEEEEETTTE-EEEEECCGGGTTSSSSCCCEEEEEECGG-GTTSCEEEEEEETT--EEEEEETT
T ss_pred cCCCeEEEEEEcCCCcEEEEEccCCE-EEEEeCCCCCCCCCCCCCCccccEEecc-cCCCcEEEEeCCCC--EEEEEeCC
Confidence 1234555555433345566678888 99996432 1 111 12221 12234666666433 34444688
Q ss_pred CcEEEEEccCC
Q 018248 245 GTVHVFGLKVD 255 (359)
Q Consensus 245 g~i~iw~~~~~ 255 (359)
|.|+.|-....
T Consensus 284 G~v~~wG~n~~ 294 (389)
T 3kci_A 284 GAVYTWGKGDY 294 (389)
T ss_dssp SCEEEEECCGG
T ss_pred CeEEEEeCCCC
Confidence 99999987653
No 361
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=62.40 E-value=32 Score=31.29 Aligned_cols=58 Identities=24% Similarity=0.330 Sum_probs=38.1
Q ss_pred EEEEEeCCCCeEEEEEcCCCc-------EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEE
Q 018248 192 FVATASSKGTLIRVFNTMDGS-------LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHV 249 (359)
Q Consensus 192 ~l~~~~~dg~~i~iwd~~~~~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 249 (359)
.+..|+.+|.+.++.-..... .+.++.......+|..|.++++.+.|..++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 567888999844555433221 2333333335568999999999999999998875544
No 362
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=61.22 E-value=61 Score=25.87 Aligned_cols=228 Identities=12% Similarity=0.089 Sum_probs=100.0
Q ss_pred CEEEEecCCceEEEEcCCCcceeeeecccCCCCceeEEEEeccCCEEEEEecCCC--------CCCeEEEEECCCccEEe
Q 018248 19 GCFATGTETGFRVYLSDPYKPIMRRDFDRNPRGGTQLVSMLFRSNIICLVNSGPH--------QSNKVMIWDDHENRYLG 90 (359)
Q Consensus 19 ~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~--------~d~~i~iwd~~~~~~~~ 90 (359)
.+++.|+. .+..||..+.+-.. ..+. . ..+-...+....++.+.+.++... ....+..||..+++...
T Consensus 17 ~i~~~GG~-~~~~yd~~~~~W~~-~~~~-~-~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 92 (318)
T 2woz_A 17 LILLVNDT-AAVAYDPMENECYL-TALA-E-QIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG 92 (318)
T ss_dssp EEEEECSS-EEEEEETTTTEEEE-EEEC-T-TSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE
T ss_pred hhhhcccc-ceEEECCCCCceec-ccCC-c-cCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE
Confidence 34455553 37889988665432 2221 1 111112222233445555554210 01237889988776543
Q ss_pred eec--cCcceeEEEEecceeEEE--ec-------CeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCC--
Q 018248 91 ELS--FRSEVKNVRLRRDRIVVV--LN-------QKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLL-- 157 (359)
Q Consensus 91 ~~~--~~~~v~~~~~~~~~~~~~--~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-- 157 (359)
.-. ....-.++....+..+++ .+ ..+.+||+.+.+-...-..........+... +..+ ++..|..
T Consensus 93 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i-yv~GG~~~~ 170 (318)
T 2woz_A 93 LPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH-NGMI-YCLGGKTDD 170 (318)
T ss_dssp CSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE-TTEE-EEECCEESS
T ss_pred CCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE-CCEE-EEEcCCCCC
Confidence 322 111122333333333443 22 3578888866543221111111111112222 3333 3442321
Q ss_pred ---CeeEEEEecCCeeeEEeecccc--cccEEEEccCCcEEEEEeCCC-----CeEEEEEcCCCcEEEEeecCCCCcceE
Q 018248 158 ---KGQVRVEDYGTKKSKYITAHAS--RIASIAMTLDGRFVATASSKG-----TLIRVFNTMDGSLLQEMRRGAERAEIY 227 (359)
Q Consensus 158 ---d~~v~~~~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg-----~~i~iwd~~~~~~~~~~~~~~~~~~i~ 227 (359)
...+.+++.....-..+..... .-.+++. -++++++.|+.++ . +.+||+.+.+-...-..........
T Consensus 171 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~~~~~p~~r~~~~ 248 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSAS-VEAFDLKTNKWEVMTEFPQERSSIS 248 (318)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEE-EEEEETTTCCEEECCCCSSCCBSCE
T ss_pred CCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccce-EEEEECCCCeEEECCCCCCcccceE
Confidence 2346666665544333321111 1112222 3667777776432 3 7789988765433211110111112
Q ss_pred EEEecCCCCEEEEEcCC--------------CcEEEEEccCCC
Q 018248 228 SLAFSSNAQWLAASSDK--------------GTVHVFGLKVDS 256 (359)
Q Consensus 228 ~~~~s~~~~~l~~~~~d--------------g~i~iw~~~~~~ 256 (359)
.+. .++++++.|+.+ ..+.+||+++.+
T Consensus 249 ~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 249 LVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 222 256777777643 347777777654
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=60.60 E-value=8.6 Score=37.73 Aligned_cols=38 Identities=11% Similarity=0.126 Sum_probs=31.9
Q ss_pred cccEEEEccCCcEEEEEeCCCCeEEEEEcCCCcEEEEee
Q 018248 180 RIASIAMTLDGRFVATASSKGTLIRVFNTMDGSLLQEMR 218 (359)
Q Consensus 180 ~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~ 218 (359)
.+.+++..++..++++-+.|++ +|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~-LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCE-EEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCE-EEEEECCCCCeEEeec
Confidence 3455666678889999999999 9999999999988754
No 364
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=57.96 E-value=65 Score=28.88 Aligned_cols=18 Identities=11% Similarity=0.115 Sum_probs=15.6
Q ss_pred CcEEEeeecccCCEEEEE
Q 018248 308 NVQYLVGFGRQNNTIVIV 325 (359)
Q Consensus 308 ~~v~~~~~s~~~~~l~~~ 325 (359)
..++.++|+||++.|++.
T Consensus 531 aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEEECTTSSEEEEE
T ss_pred ccCcCeeECCCCCEEEEE
Confidence 578999999999998876
No 365
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=56.40 E-value=30 Score=30.16 Aligned_cols=69 Identities=25% Similarity=0.365 Sum_probs=42.0
Q ss_pred ccEEEEcc----CCc--EEEEEeCCCCeEEEEEcCCCc-------EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcE
Q 018248 181 IASIAMTL----DGR--FVATASSKGTLIRVFNTMDGS-------LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTV 247 (359)
Q Consensus 181 i~~~~~s~----~~~--~l~~~~~dg~~i~iwd~~~~~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 247 (359)
.++|+... ++. .+..|..+|.+.++.-...+. .+.++.......+|..|.++++.++|..++.++.+
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~ 485 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 485 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEE
Confidence 45555542 233 567788999844554332221 22233332234689999999999999999988755
Q ss_pred EE
Q 018248 248 HV 249 (359)
Q Consensus 248 ~i 249 (359)
+|
T Consensus 486 ~v 487 (495)
T 1q47_A 486 QL 487 (495)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 366
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=55.61 E-value=91 Score=26.08 Aligned_cols=74 Identities=11% Similarity=0.123 Sum_probs=45.8
Q ss_pred ccccEEEEccC----CcEEEEEeCCCCeEEEEEcCC-----Cc---EEEEeecCCCCcceEEEEec-CCCCEEEEEcCCC
Q 018248 179 SRIASIAMTLD----GRFVATASSKGTLIRVFNTMD-----GS---LLQEMRRGAERAEIYSLAFS-SNAQWLAASSDKG 245 (359)
Q Consensus 179 ~~i~~~~~s~~----~~~l~~~~~dg~~i~iwd~~~-----~~---~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg 245 (359)
..+..|+++|+ ++.|.-....+. ++|.+.+ .. .+..+-.....+.-..+++. .+|.++++--...
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss~--~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~ 297 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSAI--KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTK 297 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSCS--EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSS
T ss_pred cCceEEEecCCcCCCCeEEEEEECCCC--cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCC
Confidence 36788899998 777777766664 5665532 21 12222110011234456775 6787788777888
Q ss_pred cEEEEEccC
Q 018248 246 TVHVFGLKV 254 (359)
Q Consensus 246 ~i~iw~~~~ 254 (359)
.|..|+..+
T Consensus 298 aI~~w~~~~ 306 (381)
T 3q6k_A 298 QVSCWNTQK 306 (381)
T ss_dssp EEEEEETTS
T ss_pred eEEEEeCCC
Confidence 899999876
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=51.68 E-value=19 Score=32.99 Aligned_cols=67 Identities=16% Similarity=0.221 Sum_probs=41.3
Q ss_pred cCCcEEEEEeCCCCeEEEEEcCCCcEEEEeecCCCCcceEEEEecC---C-------CCEEEEEc--CCCcEEEEEccCC
Q 018248 188 LDGRFVATASSKGTLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSS---N-------AQWLAASS--DKGTVHVFGLKVD 255 (359)
Q Consensus 188 ~~~~~l~~~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~---~-------~~~l~~~~--~dg~i~iw~~~~~ 255 (359)
.+..++++-+.|.. +|+|++++++++.+..-...+..... ...| . +.++++=. .+|..++|.+...
T Consensus 229 ~~~~fLftL~~Dh~-LRiWsL~t~~lv~t~DL~~~~~~~~s-~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~~l~~~ 306 (729)
T 3f7f_A 229 FHERYLIVLTQNCH-LKIWDLTSFTLIQDYDMVSQSDSDPS-HFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMGTLLVD 306 (729)
T ss_dssp ETTTEEEEEETTCE-EEEEETTTTEEEEEEETTTTSCCCSS-CCCCCCSCCCCEEESSSEEEEEETTTTCEEEEEEEEC-
T ss_pred cCCcEEEEEEcCCe-EEEEEcCCCceEEeeccccCcccccc-ccCcccCcchhHhheeeEEEEEecCCCCeEEEEEEEEc
Confidence 35779999999999 99999999998877654211100000 0111 1 24444322 5678999998654
Q ss_pred C
Q 018248 256 S 256 (359)
Q Consensus 256 ~ 256 (359)
.
T Consensus 307 ~ 307 (729)
T 3f7f_A 307 S 307 (729)
T ss_dssp -
T ss_pred C
Confidence 4
No 368
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=49.64 E-value=16 Score=35.86 Aligned_cols=40 Identities=10% Similarity=0.080 Sum_probs=31.8
Q ss_pred CCceEEEEEccCCCEEEEec-CCceEEEEcCCCcceeeeec
Q 018248 6 PITIHHLALNQDHGCFATGT-ETGFRVYLSDPYKPIMRRDF 45 (359)
Q Consensus 6 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~ 45 (359)
.+.+.+++..++..++.+-+ |+++|||++.+++......+
T Consensus 237 ~~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 237 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp TTCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred cceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 34566777788889998888 99999999998877665554
No 369
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=46.14 E-value=68 Score=28.36 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=41.9
Q ss_pred cccEEEEccCC--cEEEEEeCCCCeEEEEEcCCC----cEEEEeecCCCCcceE-EEEecCCCCEEEEEcCCCcEEE
Q 018248 180 RIASIAMTLDG--RFVATASSKGTLIRVFNTMDG----SLLQEMRRGAERAEIY-SLAFSSNAQWLAASSDKGTVHV 249 (359)
Q Consensus 180 ~i~~~~~s~~~--~~l~~~~~dg~~i~iwd~~~~----~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~dg~i~i 249 (359)
.+++|+....+ ..+..|..+|. |.-..+... ..+.++.......+|. .|.+++++.+|..++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~-l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGK-LKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSE-EEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCe-EEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35556555433 36778889998 443334322 1233443322245785 8999999999999887764444
No 370
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=43.87 E-value=2e+02 Score=26.55 Aligned_cols=192 Identities=10% Similarity=0.059 Sum_probs=99.6
Q ss_pred EeccCCEEEE--EecCCCCCCeEEEEECCCccEEeeeccC-c--------ceeEEEEecceeEEE-e------------c
Q 018248 58 MLFRSNIICL--VNSGPHQSNKVMIWDDHENRYLGELSFR-S--------EVKNVRLRRDRIVVV-L------------N 113 (359)
Q Consensus 58 ~~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~~~~~~~-~--------~v~~~~~~~~~~~~~-~------------d 113 (359)
++++++.+++ .-+|. .-..++++|+.+++.+..--.+ . ....++|..+..+++ . .
T Consensus 137 ~~~~~~~~~~~ls~~G~-d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGK-DEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTC-SEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCC-ceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 6677766544 33343 4577999999999877421111 0 113447765444444 1 2
Q ss_pred CeEEEEEcccce--eeeeEeccCCCcee-eeeecCCCcc---EEEe-c-CCCCeeEEEEecCC--eeeEEeecccccccE
Q 018248 114 QKVYVYNFTDLK--LVDQIETVVNPTGL-CDVSQNAGPM---VMAC-P-GLLKGQVRVEDYGT--KKSKYITAHASRIAS 183 (359)
Q Consensus 114 ~~i~i~d~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~---~l~~-~-g~~d~~v~~~~~~~--~~~~~~~~~~~~i~~ 183 (359)
..|+.|.+-+.. -...+......+.. ...+.++... ++++ + +.....+++-+.+. .....+..... ..
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~ 293 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSD--AT 293 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTT--CE
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCc--ce
Confidence 578888875432 23334444443322 3345565542 2332 1 22335555543331 22233322221 22
Q ss_pred EEEccCCcEEEEE----------eCCCCeEEEEEcCCCc-------EEEE-eecCCCCcceEEEEecCCCCEEEEEcCCC
Q 018248 184 IAMTLDGRFVATA----------SSKGTLIRVFNTMDGS-------LLQE-MRRGAERAEIYSLAFSSNAQWLAASSDKG 245 (359)
Q Consensus 184 ~~~s~~~~~l~~~----------~~dg~~i~iwd~~~~~-------~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 245 (359)
+..++++.+++.. ...+. |...|+.++. .... +.. .....+..+.|..+ .++++...++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~-~l~~~~~~~~ 370 (711)
T 4hvt_A 294 LQGSFKEYVFWLLRSDWKFKSHNIKAGS-LVALHFTDLLKTESDKTSLKILFTP-TANEVFNFISTTKD-RVFLATYDNV 370 (711)
T ss_dssp EEEEETTEEEEECSSCEEETTEEECTTC-EEEEEGGGGGSCGGGCTTCEEEECC-CTTEEEEEEEECSS-CEEEEEEETT
T ss_pred EeeeECCEEEEEECcccccccccCCCCe-EEEEECCcccccccccccceEEECC-CCCCeEEEEEEECC-EEEEEEEECC
Confidence 3345566655532 24667 8889987632 2222 332 23457888999876 5677777776
Q ss_pred c--EEEEEccCC
Q 018248 246 T--VHVFGLKVD 255 (359)
Q Consensus 246 ~--i~iw~~~~~ 255 (359)
. |.++++.++
T Consensus 371 ~~~l~~~~~~~g 382 (711)
T 4hvt_A 371 VAKVVTFTLENE 382 (711)
T ss_dssp EEEEEEECEETT
T ss_pred EEEEEEEECCCC
Confidence 5 666666554
No 371
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=41.96 E-value=1.5e+02 Score=24.76 Aligned_cols=151 Identities=13% Similarity=0.144 Sum_probs=74.9
Q ss_pred cceeEEEEecceeEEE-ecCeEEEEEccc-cee----------eeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEE
Q 018248 96 SEVKNVRLRRDRIVVV-LNQKVYVYNFTD-LKL----------VDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRV 163 (359)
Q Consensus 96 ~~v~~~~~~~~~~~~~-~d~~i~i~d~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~ 163 (359)
..|..++......+++ .+|.|+.|-... +++ ...+... ....+..++......+++. .+|.|+.
T Consensus 121 ~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~-~~~~i~~va~G~~hs~alt---~~G~v~~ 196 (406)
T 4d9s_A 121 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EGIRIKMVAAGAEHTAAVT---EDGDLYG 196 (406)
T ss_dssp CCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGG-TTCCEEEEEECSSEEEEEE---TTSCEEE
T ss_pred CCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEeccc-CCCcEEEEecCCCeEEEEe---CCCCEEE
Confidence 3577777766655555 899999997532 110 1111111 1122334443333333332 5888888
Q ss_pred EecCC--e----------eeEEeec-ccccccEEEEccCCcEEEEEeCCCCeEEEEEcCCC----------cE-EEEeec
Q 018248 164 EDYGT--K----------KSKYITA-HASRIASIAMTLDGRFVATASSKGTLIRVFNTMDG----------SL-LQEMRR 219 (359)
Q Consensus 164 ~~~~~--~----------~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~----------~~-~~~~~~ 219 (359)
|-... + ....+.. ....|..++. -..+.+.-..+|. |+.|-.... .. ...+..
T Consensus 197 wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~--G~~ht~~l~~~G~-v~~wG~n~~GqlG~g~~~~~~~p~~v~~ 273 (406)
T 4d9s_A 197 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC--GWRHTISVSYSGA-LYTYGWSKYGQLGHGDLEDHLIPHKLEA 273 (406)
T ss_dssp EECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE--CSSEEEEEETTCC-EEEEECCTTSTTCSSSCCCEEEEEECGG
T ss_pred eeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEE--CCCcEEEEcCCCC-EEEeeCCCCCCCCCCCCcCccccEEecc
Confidence 76432 0 0111111 1123444443 3344555567888 888864321 11 111221
Q ss_pred CCCCcceEEEEecCCCCEEEEEcCCCcEEEEEccCCC
Q 018248 220 GAERAEIYSLAFSSNAQWLAASSDKGTVHVFGLKVDS 256 (359)
Q Consensus 220 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 256 (359)
.....|..++-.. ...+.-..||.|+.|-.....
T Consensus 274 -~~~~~v~~i~~G~--~hs~alt~~G~v~~wG~n~~G 307 (406)
T 4d9s_A 274 -LSNSFISQISGGW--RHTMALTSDGKLYGWGWNKFG 307 (406)
T ss_dssp -GTTSCEEEEEECS--SEEEEEETTSCEEEEECCTTS
T ss_pred -cCCCCEEEEEecC--CEEEEEcCCCeEEEeeCCCCC
Confidence 1223466666543 344445688999999876544
No 372
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=38.71 E-value=98 Score=27.62 Aligned_cols=57 Identities=2% Similarity=-0.052 Sum_probs=38.4
Q ss_pred ceeEEEEecceeEEE-ecC--------------eEEEEEcccceeeeeEecc-CCCceeeeeecCCCccEEEe
Q 018248 97 EVKNVRLRRDRIVVV-LNQ--------------KVYVYNFTDLKLVDQIETV-VNPTGLCDVSQNAGPMVMAC 153 (359)
Q Consensus 97 ~v~~~~~~~~~~~~~-~d~--------------~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 153 (359)
....|.|.++|.+.+ .|+ .+..++..+++....+... ....+-++|+|+++.++++.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 456788999887776 554 5666666667665555432 23467789999988766665
No 373
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=37.37 E-value=1.2e+02 Score=27.16 Aligned_cols=58 Identities=17% Similarity=0.220 Sum_probs=37.1
Q ss_pred EEEEEeCCCCeEEEEEcCCC----c-EEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEE
Q 018248 192 FVATASSKGTLIRVFNTMDG----S-LLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHV 249 (359)
Q Consensus 192 ~l~~~~~dg~~i~iwd~~~~----~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 249 (359)
.+..|+.+|.+.++.....+ . .+.++..-....+|..+.++++...|..++.++.++|
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 66788889983445443322 1 2233332123468899999999999998887765554
No 374
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=35.62 E-value=68 Score=18.83 Aligned_cols=29 Identities=17% Similarity=0.316 Sum_probs=20.8
Q ss_pred cCCEEEEEecCCeEEEEEeCCCCCCceEEee
Q 018248 318 QNNTIVIVGLDGSYYKCEFDPMKGGEMHQLE 348 (359)
Q Consensus 318 ~~~~l~~~~~dg~i~v~~~~~~~~~~~~~~~ 348 (359)
..+.++... +|.|+||++++.+ +++.+.+
T Consensus 28 e~nhFgv~e-~g~iKIykyde~t-NeI~LkK 56 (72)
T 3kvp_A 28 EHNHFGVME-DGYIKIYEYNESR-NEVKLKK 56 (72)
T ss_dssp STTEEEEEE-TTEEEEEEEETTT-TEEEEEE
T ss_pred cCCEEEEEe-CCEEEEEEeCCCC-CeEEEEE
Confidence 345677666 9999999999876 4555443
No 375
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=32.63 E-value=2.1e+02 Score=23.68 Aligned_cols=192 Identities=13% Similarity=0.149 Sum_probs=95.5
Q ss_pred ceeEEEEeccCCEEEEEecCCCCCCeEEEEECCCc-----------cEEeeec--cCcceeEEEEecceeEEE-ecCeEE
Q 018248 52 GTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHEN-----------RYLGELS--FRSEVKNVRLRRDRIVVV-LNQKVY 117 (359)
Q Consensus 52 ~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~~-----------~~~~~~~--~~~~v~~~~~~~~~~~~~-~d~~i~ 117 (359)
.+..++++......+.+. .||.|..|-.... .....+. ....|..++.......++ .+|.|+
T Consensus 106 ~~~~v~i~~G~~h~~al~----~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~ 181 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALS----SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 181 (389)
T ss_dssp CEEEEEECTTCSEEEEEE----TTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEE
T ss_pred ceeEEEECcCCCeEEEEc----CCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEE
Confidence 345566665556666666 6899999964321 0111112 123577777666655555 899999
Q ss_pred EEEccc-cee----------eeeEeccCCCceeeeeecCC-CccEEEecCCCCeeEEEEecCC------------eeeEE
Q 018248 118 VYNFTD-LKL----------VDQIETVVNPTGLCDVSQNA-GPMVMACPGLLKGQVRVEDYGT------------KKSKY 173 (359)
Q Consensus 118 i~d~~~-~~~----------~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~d~~v~~~~~~~------------~~~~~ 173 (359)
.|-... +++ ...+.. .....+..++... ....++.. .+|.|+.|-... .....
T Consensus 182 ~wG~n~~GqLG~~~~~~~~~p~~v~~-~~~~~v~~ia~G~g~~~t~~l~--~~G~v~~wG~n~~GqLG~g~~~~~~~p~~ 258 (389)
T 3kci_A 182 TWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIACGSGDAQTLCLT--DDDTVWSWGDGDYGKLGRGGSDGCKVPMK 258 (389)
T ss_dssp EEECCGGGTTCSSSCCCEEEEEECGG-GTTSCEEEEEECCSSCEEEEEE--TTTEEEEEECCGGGTTSSSSCCCEEEEEE
T ss_pred EeCCCCCCCcCCCCCcccccceEecc-cCCCeEEEEEEcCCCcEEEEEc--cCCEEEEEeCCCCCCCCCCCCCCccccEE
Confidence 997532 110 111111 1112233333321 12223322 578888876542 01111
Q ss_pred eecc-cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCC----------c-EEEEeecCCCCcceEEEEecCCCCEEEEE
Q 018248 174 ITAH-ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDG----------S-LLQEMRRGAERAEIYSLAFSSNAQWLAAS 241 (359)
Q Consensus 174 ~~~~-~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~----------~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 241 (359)
+... ...|..++.. ..+.+.-..+|. |+.|-.... . ....+.. .....|..++... ...+..
T Consensus 259 v~~~~~~~v~~v~~G--~~hs~alt~~G~-v~~wG~n~~GqLG~g~~~~~~~P~~v~~-l~~~~v~~ia~G~--~h~~al 332 (389)
T 3kci_A 259 IDSLTGLGVVKVECG--SQFSVALTKSGA-VYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGS--LHCVCC 332 (389)
T ss_dssp CGGGTTSCEEEEEEE--TTEEEEEETTSC-EEEEECCGGGTTCSSSCCCEEEEEECGG-GTTCCEEEEEECS--SEEEEE
T ss_pred ecccCCCcEEEEeCC--CCEEEEEeCCCe-EEEEeCCCCCCCCCCCCccccCCeEecc-CCCCCEEEEEecc--CeEEEE
Confidence 1111 1134444432 334445567888 999964321 1 1112221 1223576776643 344445
Q ss_pred cCCCcEEEEEccCCC
Q 018248 242 SDKGTVHVFGLKVDS 256 (359)
Q Consensus 242 ~~dg~i~iw~~~~~~ 256 (359)
..||.|+.|-.....
T Consensus 333 ~~~G~v~~wG~n~~G 347 (389)
T 3kci_A 333 TEDGEVYTWGDNDEG 347 (389)
T ss_dssp ETTCCEEEEECCTTS
T ss_pred CCCCCEEEeeCCCCC
Confidence 789999999887654
No 376
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=31.08 E-value=2.3e+02 Score=25.89 Aligned_cols=69 Identities=20% Similarity=0.343 Sum_probs=43.3
Q ss_pred ccEEEEc----cCCc---EEEEEeCCCCeEEEEEcCCCcE-EEEeecCCCCcceEEEEecCCC--CEEEEEcCCCcEEE
Q 018248 181 IASIAMT----LDGR---FVATASSKGTLIRVFNTMDGSL-LQEMRRGAERAEIYSLAFSSNA--QWLAASSDKGTVHV 249 (359)
Q Consensus 181 i~~~~~s----~~~~---~l~~~~~dg~~i~iwd~~~~~~-~~~~~~~~~~~~i~~~~~s~~~--~~l~~~~~dg~i~i 249 (359)
.+.|+.. .+++ .+..|..+|.++++-....... +.++..-....+|..|.++++. .+|..++.++.++|
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 4556553 3443 6778889998445555444322 2233222234688899999988 89998888775554
No 377
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=29.85 E-value=3.3e+02 Score=25.05 Aligned_cols=235 Identities=11% Similarity=0.081 Sum_probs=110.6
Q ss_pred EEEE-EccCCCEEEEec--C----CceEEEEcCCCcceeeeecc-cCCC-----CceeEEEEeccCCEEEEEec------
Q 018248 10 HHLA-LNQDHGCFATGT--E----TGFRVYLSDPYKPIMRRDFD-RNPR-----GGTQLVSMLFRSNIICLVNS------ 70 (359)
Q Consensus 10 ~~~~-~s~~g~~l~~~~--d----~~i~iw~~~~~~~~~~~~~~-~~h~-----~~v~~~~~~~~~~~~~~~~~------ 70 (359)
..+. ++||+++++.+- . ..++++|+++++... -.+. .+.. .....++|. +.+.+++...
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~-~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK-NGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT-TCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCB
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC-CCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCc
Confidence 3445 889999987754 2 238999999865431 1111 0000 011344665 4555555321
Q ss_pred --CCCCCCeEEEEECCCcc--EEeeec--cCcceeEEEEeccee-----EEE------ecCeEEEEEccc--ceeeeeEe
Q 018248 71 --GPHQSNKVMIWDDHENR--YLGELS--FRSEVKNVRLRRDRI-----VVV------LNQKVYVYNFTD--LKLVDQIE 131 (359)
Q Consensus 71 --~~~~d~~i~iwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~-----~~~------~d~~i~i~d~~~--~~~~~~~~ 131 (359)
.. ...+|+.|.+-+.. -...+. ...--.....++++. .++ ....+++.+... ++ +..+.
T Consensus 210 ~~~~-~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 287 (711)
T 4hvt_A 210 TSSL-YPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKIN 287 (711)
T ss_dssp CTTS-SBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECC
T ss_pred CcCC-CCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEee
Confidence 11 34779999876542 222333 222122333445543 222 224566666542 33 22222
Q ss_pred ccCCCceeeeeecCCCccEEEecCC--------CCeeEEEEecCC--------eeeEE-e-ecccccccEEEEccCCcEE
Q 018248 132 TVVNPTGLCDVSQNAGPMVMACPGL--------LKGQVRVEDYGT--------KKSKY-I-TAHASRIASIAMTLDGRFV 193 (359)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~l~~~g~--------~d~~v~~~~~~~--------~~~~~-~-~~~~~~i~~~~~s~~~~~l 193 (359)
.... .. +...+.+ .+++..... ..+.|...+... ...+. + ......+..+.+..+ .++
T Consensus 288 ~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 288 MPSD-AT-LQGSFKE-YVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp SCTT-CE-EEEEETT-EEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred cCCc-ce-EeeeECC-EEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 2221 11 1222322 333322110 234454433322 11222 2 223446778888765 566
Q ss_pred EEEeCCCC-eEEEEEcCCCc-EEEE-eecCCCCcceEEEEecCCCCE-EEEEcC---CCcEEEEEcc
Q 018248 194 ATASSKGT-LIRVFNTMDGS-LLQE-MRRGAERAEIYSLAFSSNAQW-LAASSD---KGTVHVFGLK 253 (359)
Q Consensus 194 ~~~~~dg~-~i~iwd~~~~~-~~~~-~~~~~~~~~i~~~~~s~~~~~-l~~~~~---dg~i~iw~~~ 253 (359)
++...++. .|.++|+.+++ .... +... ..+.+..+..++++.. +++.+. -+.+..+|+.
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp-~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLP-YQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCC-STTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCC-CCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 66666663 16677776664 2222 3221 1245766777777654 444332 3567777765
No 378
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=26.73 E-value=2.5e+02 Score=22.54 Aligned_cols=76 Identities=17% Similarity=0.157 Sum_probs=47.3
Q ss_pred cccccEEEEccCCcEEEEEeCCCCeEEEEEcCCC-------cEEEEeecCCCCcceEEEEecCCCCEEEEEcCCCcEEEE
Q 018248 178 ASRIASIAMTLDGRFVATASSKGTLIRVFNTMDG-------SLLQEMRRGAERAEIYSLAFSSNAQWLAASSDKGTVHVF 250 (359)
Q Consensus 178 ~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~~-------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 250 (359)
...+..+....+...++..+.+|. +..+....- +-+..+... ....|.++..-.++..|++.+..|..+..
T Consensus 150 ~d~lv~~~~~~~~~~i~l~T~~G~-~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~ 227 (312)
T 1suu_A 150 KDFVTSAEIVFKDEKVICLSKKGS-AFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRL 227 (312)
T ss_dssp TCCEEEEEEECTTCEEEEEETTSE-EEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCc-EEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEE
Confidence 345555555445567888888998 888876431 112222221 23456666655566678888999999998
Q ss_pred EccCC
Q 018248 251 GLKVD 255 (359)
Q Consensus 251 ~~~~~ 255 (359)
.+..-
T Consensus 228 ~~~e~ 232 (312)
T 1suu_A 228 NMSKI 232 (312)
T ss_dssp EGGGS
T ss_pred EHHHh
Confidence 88654
No 379
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=23.94 E-value=2.6e+02 Score=21.89 Aligned_cols=180 Identities=13% Similarity=0.083 Sum_probs=84.9
Q ss_pred ceEEEEEccCCCEEEEecCCceEEEEcCCCccee-eeecccCCCCceeEEEEeccCCEEEEEecCCCCCCeEEEEECCC-
Q 018248 8 TIHHLALNQDHGCFATGTETGFRVYLSDPYKPIM-RRDFDRNPRGGTQLVSMLFRSNIICLVNSGPHQSNKVMIWDDHE- 85 (359)
Q Consensus 8 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~iwd~~~- 85 (359)
.|..++...+-..++ .|+.+..|-.+...+.- ...+ ...+..++ -.....+... ++.|..|-...
T Consensus 64 ~i~~ia~G~~hs~~l--~~G~v~~wG~n~~Gqlg~P~~~----~~~v~~ia--~G~~hs~al~-----~G~v~~wG~n~~ 130 (282)
T 3qhy_B 64 GVDAIAAGNYHSLAL--KDGEVIAWGGNEDGQTTVPAEA----RSGVDAIA--AGAWASYALK-----DGKVIAWGDDSD 130 (282)
T ss_dssp CCCEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGG----SSSEEEEE--EETTEEEEEE-----TTEEEEEECCTT
T ss_pred CEEEEEeCCCEEEEE--ECCEEEEeeCCCCCCCCCCccc----CCCeEEEE--CcCCEEEEEe-----CCeEEEecCCCC
Confidence 455555443332223 37777777665332211 1111 22333333 2333333333 28899997544
Q ss_pred ccEEeeeccCcceeEEEEecceeEEEecCeEEEEEcccceeeeeEeccCCCceeeeeecCCCccEEEecCCCCeeEEEEe
Q 018248 86 NRYLGELSFRSEVKNVRLRRDRIVVVLNQKVYVYNFTDLKLVDQIETVVNPTGLCDVSQNAGPMVMACPGLLKGQVRVED 165 (359)
Q Consensus 86 ~~~~~~~~~~~~v~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~ 165 (359)
+++-........|..++......+++.++.|+.|-......+..-..... ....++..... .++. .+|.++.|-
T Consensus 131 gqlg~~~~~~~~i~~i~~G~~~~~~l~~G~v~~wG~n~~gqlg~p~~~~~--~v~~i~~G~~h-s~al---~~G~v~~wG 204 (282)
T 3qhy_B 131 GQTTVPAEAQSGVTALDGGVYTALAVKNGGVIAWGDNYFGQTTVPAEAQS--GVDDVAGGIFH-SLAL---KDGKVIAWG 204 (282)
T ss_dssp STTSCCGGGGSSEEEEEECSSEEEEEETTEEEEEECCTTSTTSCCGGGGS--SEEEEEECSSE-EEEE---ETTEEEEEE
T ss_pred CcCCCCccCCCCeEEEEcccCEEEEEECCEEEEecCCCCCCCCCceecCC--CeEEEEecCCE-EEEE---ECCeEEEEE
Confidence 22211112345677777666655555789999997643211110000111 23333333332 2332 378888876
Q ss_pred cCCe-eeEEeecccccccEEEEccCCcEEEEEeCCCCeEEEEEcCC
Q 018248 166 YGTK-KSKYITAHASRIASIAMTLDGRFVATASSKGTLIRVFNTMD 210 (359)
Q Consensus 166 ~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~~i~iwd~~~ 210 (359)
.+.. .+-.-......|..++...+...+++ ||. |+.|-...
T Consensus 205 ~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~-v~~wG~n~ 246 (282)
T 3qhy_B 205 DNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGK-VIAWGSSR 246 (282)
T ss_dssp CCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTE-EEEESTTC
T ss_pred CCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCE-EEEecCCC
Confidence 5431 11000112235667765444333333 888 88886443
No 380
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=22.89 E-value=2.7e+02 Score=21.58 Aligned_cols=32 Identities=25% Similarity=0.184 Sum_probs=23.4
Q ss_pred cceEEEEecCCCCEEEEEcCCCcEEEEEccCC
Q 018248 224 AEIYSLAFSSNAQWLAASSDKGTVHVFGLKVD 255 (359)
Q Consensus 224 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 255 (359)
..|.++....++.+|+.++..|.++...+..-
T Consensus 84 e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~ 115 (256)
T 1zvt_A 84 ATVDHMLMESDDQKLLMASDAGYGFVCTFNDL 115 (256)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGG
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHh
Confidence 45666644345667888999999999988653
No 381
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=22.67 E-value=3.2e+02 Score=22.45 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=14.6
Q ss_pred CCceEEEEEcc--CCCEEEEecCC
Q 018248 6 PITIHHLALNQ--DHGCFATGTET 27 (359)
Q Consensus 6 ~~~v~~~~~s~--~g~~l~~~~d~ 27 (359)
...|.+|++.| ++.+++.+..+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CCceEEEEECCCCCCeEEEEecCC
Confidence 45799999998 55555554454
No 382
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=22.47 E-value=2.5e+02 Score=25.77 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=40.7
Q ss_pred ccEEEEccCC--cEEEEEeCCCCeEEEEEcCC-C---cEEEEeecCCCCcce-EEEEecCCCCEEEEEcCCCcEEE
Q 018248 181 IASIAMTLDG--RFVATASSKGTLIRVFNTMD-G---SLLQEMRRGAERAEI-YSLAFSSNAQWLAASSDKGTVHV 249 (359)
Q Consensus 181 i~~~~~s~~~--~~l~~~~~dg~~i~iwd~~~-~---~~~~~~~~~~~~~~i-~~~~~s~~~~~l~~~~~dg~i~i 249 (359)
.++|+....+ ..+..|..+|. |.-.-+.. . ..+.++.......+| ..+.++++..+|..++.++.++|
T Consensus 401 lT~VaV~~~~~~tVlFLGT~~G~-l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 401 LTSVASYVYNGYSVVFVGTKSGK-LKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp BCCCEEEEETTEEEEEEEBTTSE-EEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEecCceEEEEEECCCce-EEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 4555554422 35778889998 54333322 1 233344322134566 68999999889998888765555
No 383
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=21.20 E-value=4.3e+02 Score=23.51 Aligned_cols=70 Identities=21% Similarity=0.301 Sum_probs=43.0
Q ss_pred cccEEEEcc----CC--cEEEEEeCCCCeEEEEEcCC------C-cEEEEeecC---------CCCcceEEEEecCCCCE
Q 018248 180 RIASIAMTL----DG--RFVATASSKGTLIRVFNTMD------G-SLLQEMRRG---------AERAEIYSLAFSSNAQW 237 (359)
Q Consensus 180 ~i~~~~~s~----~~--~~l~~~~~dg~~i~iwd~~~------~-~~~~~~~~~---------~~~~~i~~~~~s~~~~~ 237 (359)
..+.|+... ++ ..+..|+.+|.+.++..... . ..+.++..- ....+|..+.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 356777664 22 36778999998334554321 1 122233211 01357889999999999
Q ss_pred EEEEcCCCcEEE
Q 018248 238 LAASSDKGTVHV 249 (359)
Q Consensus 238 l~~~~~dg~i~i 249 (359)
|..++.++.++|
T Consensus 484 LYV~s~~~V~qV 495 (565)
T 3oky_B 484 LYVAFSTCVIKV 495 (565)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEecCeEEEe
Confidence 999988876665
No 384
>3dgp_A RNA polymerase II transcription factor B subunit; protein-protein complex, beta-alpha-beta spilt, heterodimer, damage, DNA excision; 1.80A {Saccharomyces cerevisiae}
Probab=20.79 E-value=3.3 Score=25.54 Aligned_cols=11 Identities=18% Similarity=0.594 Sum_probs=2.7
Q ss_pred cEEEEEccCCC
Q 018248 246 TVHVFGLKVDS 256 (359)
Q Consensus 246 ~i~iw~~~~~~ 256 (359)
.|++|.++...
T Consensus 7 QIrLWe~ErnR 17 (80)
T 3dgp_A 7 QIRLWQLELDR 17 (80)
T ss_dssp -------CGGG
T ss_pred HHHHHHHhhCc
Confidence 58899888765
No 385
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=20.48 E-value=4.6e+02 Score=23.42 Aligned_cols=151 Identities=13% Similarity=0.183 Sum_probs=85.2
Q ss_pred eEEEEECCCccEEeeeccC---cce---------------eEEEEec-ce-eEEE-----ecCeEEEEEcccceeeee--
Q 018248 77 KVMIWDDHENRYLGELSFR---SEV---------------KNVRLRR-DR-IVVV-----LNQKVYVYNFTDLKLVDQ-- 129 (359)
Q Consensus 77 ~i~iwd~~~~~~~~~~~~~---~~v---------------~~~~~~~-~~-~~~~-----~d~~i~i~d~~~~~~~~~-- 129 (359)
.|.++|=.+|+.+...... ..+ .+++... +. .+++ ....+..||.+.+++...
T Consensus 230 yL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~ 309 (591)
T 2zux_A 230 YLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWT 309 (591)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEE
T ss_pred EEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEE
Confidence 3889998899888876521 212 1222211 11 1222 233588888877765333
Q ss_pred EeccC-----------CCceeeeeecCCCccEEEecCCCCeeEEEEecCCeeeEEe-ecccccccEEEEccCC--cEEEE
Q 018248 130 IETVV-----------NPTGLCDVSQNAGPMVMACPGLLKGQVRVEDYGTKKSKYI-TAHASRIASIAMTLDG--RFVAT 195 (359)
Q Consensus 130 ~~~~~-----------~~~~~~~~~~~~~~~~l~~~g~~d~~v~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~--~~l~~ 195 (359)
+.... +...+..+.-+++.-++. |+ . +.+.+++.+... .+|...+....|.|+. ..++.
T Consensus 310 ~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~--Gs----~-~iD~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~ 382 (591)
T 2zux_A 310 LDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIF--GS----M-AVDHDGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQ 382 (591)
T ss_dssp EETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEE--TT----E-EECTTSCEEEECSCCCCSCEEEECCCTTSSSCEEEE
T ss_pred ecCCCCCcccccccCCCCCeeEeCCCCCCceEEE--ee----e-EECCCCCEeeeCCCCCCCeeEEeecCCCCCCcEEEE
Confidence 33211 233444455555543333 22 0 223344444333 3788888888888874 46666
Q ss_pred EeCCC----CeEEEEEcCCCcEEEEeecCCCCcceEEEEecCCC
Q 018248 196 ASSKG----TLIRVFNTMDGSLLQEMRRGAERAEIYSLAFSSNA 235 (359)
Q Consensus 196 ~~~dg----~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 235 (359)
+.+++ . ..+.|..+|+.+.......+.+......|.|+.
T Consensus 383 ~~E~~~~~~G-~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~~ 425 (591)
T 2zux_A 383 VHEDKNAKYG-LSFRDAATGKILWGVYAGKDVGRGMAADIDPRY 425 (591)
T ss_dssp ECCCTTSSCS-EEEEETTTCCEEEEECCSSCCCCEEEECCCTTS
T ss_pred EecCCCCCCc-cEEEECCCCcEEEEcCCCCCCCceeEEecCCCC
Confidence 66541 3 678999999999888654455666666677764
Done!