Query 018250
Match_columns 359
No_of_seqs 173 out of 682
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 12:18:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018250.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018250hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1m6e_X S-adenosyl-L-methionnin 100.0 9.4E-92 3.2E-96 687.3 25.0 340 4-357 1-358 (359)
2 2efj_A 3,7-dimethylxanthine me 100.0 4.4E-91 1.5E-95 687.6 26.6 339 7-358 5-380 (384)
3 3b5i_A S-adenosyl-L-methionine 100.0 9.8E-90 3.3E-94 677.1 33.3 347 4-354 1-374 (374)
4 3ccf_A Cyclopropane-fatty-acyl 99.7 9.9E-17 3.4E-21 150.1 17.3 234 10-336 25-258 (279)
5 2yqz_A Hypothetical protein TT 99.7 9.7E-16 3.3E-20 140.9 17.4 224 57-357 39-263 (263)
6 2p35_A Trans-aconitate 2-methy 99.7 3.8E-16 1.3E-20 143.5 14.4 230 17-337 8-238 (259)
7 3dtn_A Putative methyltransfer 99.4 4.8E-12 1.6E-16 114.5 19.0 169 56-286 43-214 (234)
8 3bus_A REBM, methyltransferase 99.4 5.6E-12 1.9E-16 116.7 17.9 194 57-330 61-256 (273)
9 3ujc_A Phosphoethanolamine N-m 99.4 3.2E-11 1.1E-15 110.6 18.3 194 56-333 54-249 (266)
10 3kkz_A Uncharacterized protein 99.3 2.2E-11 7.5E-16 112.7 16.5 211 56-356 45-257 (267)
11 2o57_A Putative sarcosine dime 99.3 5.9E-11 2E-15 111.4 18.4 151 57-286 82-234 (297)
12 3f4k_A Putative methyltransfer 99.3 2.3E-11 7.8E-16 111.4 15.2 210 57-356 46-257 (257)
13 1vl5_A Unknown conserved prote 99.3 9.5E-12 3.3E-16 114.6 11.5 153 57-288 37-192 (260)
14 3hnr_A Probable methyltransfer 99.3 3E-11 1E-15 108.0 13.7 157 57-286 45-201 (220)
15 3ege_A Putative methyltransfer 99.3 1.2E-11 4.1E-16 114.5 10.8 191 57-334 34-232 (261)
16 4gek_A TRNA (CMO5U34)-methyltr 99.3 2.4E-11 8.2E-16 113.5 12.7 162 57-282 70-241 (261)
17 1xxl_A YCGJ protein; structura 99.3 3.3E-11 1.1E-15 110.0 13.1 154 56-288 20-176 (239)
18 3sm3_A SAM-dependent methyltra 99.3 1.9E-11 6.5E-16 109.9 11.2 172 57-288 30-209 (235)
19 3hem_A Cyclopropane-fatty-acyl 99.3 4E-10 1.4E-14 106.3 20.6 166 57-286 72-243 (302)
20 2aot_A HMT, histamine N-methyl 99.3 2.5E-11 8.6E-16 114.3 12.1 157 56-285 51-220 (292)
21 3dli_A Methyltransferase; PSI- 99.3 5.2E-11 1.8E-15 108.4 13.4 143 57-287 41-185 (240)
22 3h2b_A SAM-dependent methyltra 99.2 3E-11 1E-15 106.9 11.1 143 58-288 42-184 (203)
23 3mgg_A Methyltransferase; NYSG 99.2 1.3E-10 4.3E-15 107.8 15.8 160 56-287 36-199 (276)
24 4htf_A S-adenosylmethionine-de 99.2 5.3E-11 1.8E-15 111.2 12.6 165 57-289 68-235 (285)
25 4hg2_A Methyltransferase type 99.2 3.8E-11 1.3E-15 112.0 11.1 101 57-219 39-140 (257)
26 1kpg_A CFA synthase;, cyclopro 99.2 4.1E-09 1.4E-13 98.3 24.1 160 57-286 64-228 (287)
27 3lcc_A Putative methyl chlorid 99.2 1.8E-10 6.1E-15 104.5 12.9 142 58-289 67-210 (235)
28 3ou2_A SAM-dependent methyltra 99.2 3.7E-10 1.3E-14 100.3 14.6 155 58-286 47-205 (218)
29 2g72_A Phenylethanolamine N-me 99.2 5.3E-11 1.8E-15 111.7 9.4 155 57-292 71-262 (289)
30 1nkv_A Hypothetical protein YJ 99.2 1.7E-10 5.7E-15 105.6 12.0 150 57-286 36-187 (256)
31 3vc1_A Geranyl diphosphate 2-C 99.1 2.5E-10 8.6E-15 108.4 12.8 148 57-286 117-269 (312)
32 2p7i_A Hypothetical protein; p 99.1 2.2E-10 7.7E-15 103.4 11.5 153 58-287 43-200 (250)
33 3g5l_A Putative S-adenosylmeth 99.1 2.2E-10 7.4E-15 104.9 10.9 167 57-287 44-217 (253)
34 2a14_A Indolethylamine N-methy 99.1 1.3E-10 4.6E-15 107.8 9.6 150 56-287 54-239 (263)
35 3dh0_A SAM dependent methyltra 99.1 4.8E-10 1.6E-14 100.1 12.8 142 57-286 37-181 (219)
36 3e23_A Uncharacterized protein 99.1 2.2E-10 7.5E-15 102.0 10.5 141 57-287 43-183 (211)
37 1xtp_A LMAJ004091AAA; SGPP, st 99.1 1.9E-10 6.4E-15 104.9 10.3 147 56-286 92-238 (254)
38 3dlc_A Putative S-adenosyl-L-m 99.1 1.1E-10 3.9E-15 103.4 8.6 156 59-286 45-203 (219)
39 3l8d_A Methyltransferase; stru 99.1 5.8E-10 2E-14 100.9 13.3 148 57-287 53-201 (242)
40 1pjz_A Thiopurine S-methyltran 99.1 1.9E-10 6.6E-15 102.8 9.0 140 57-288 22-178 (203)
41 3g5t_A Trans-aconitate 3-methy 99.1 1E-10 3.6E-15 110.2 7.4 223 57-356 36-298 (299)
42 3cc8_A Putative methyltransfer 99.1 2.4E-09 8.2E-14 95.5 15.9 153 57-288 32-187 (230)
43 2fk8_A Methoxy mycolic acid sy 99.1 1E-08 3.5E-13 97.2 20.7 159 57-286 90-254 (318)
44 3ocj_A Putative exported prote 99.1 9.4E-10 3.2E-14 104.1 12.9 167 57-286 118-291 (305)
45 1vlm_A SAM-dependent methyltra 99.1 3.1E-09 1.1E-13 95.4 15.4 142 58-287 48-189 (219)
46 3bkx_A SAM-dependent methyltra 99.1 1E-08 3.5E-13 94.7 18.7 166 57-287 43-220 (275)
47 1ri5_A MRNA capping enzyme; me 99.0 9.7E-10 3.3E-14 102.4 11.8 161 57-286 64-250 (298)
48 3gu3_A Methyltransferase; alph 99.0 5E-09 1.7E-13 98.0 16.0 211 56-333 21-253 (284)
49 3e8s_A Putative SAM dependent 99.0 9.2E-10 3.2E-14 98.0 10.2 156 58-286 53-209 (227)
50 2ex4_A Adrenal gland protein A 99.0 8.3E-10 2.8E-14 100.5 9.6 146 57-286 79-225 (241)
51 3i53_A O-methyltransferase; CO 99.0 9.3E-09 3.2E-13 98.4 17.2 152 56-286 168-321 (332)
52 2gb4_A Thiopurine S-methyltran 99.0 2.4E-09 8.1E-14 99.4 12.6 140 57-288 68-229 (252)
53 3bgv_A MRNA CAP guanine-N7 met 99.0 1.5E-10 5.2E-15 109.8 4.6 160 57-286 34-232 (313)
54 3gwz_A MMCR; methyltransferase 99.0 8.9E-09 3E-13 100.3 17.1 153 56-285 201-355 (369)
55 3lst_A CALO1 methyltransferase 99.0 5.6E-09 1.9E-13 100.8 15.1 150 56-285 183-335 (348)
56 1y8c_A S-adenosylmethionine-de 99.0 7.6E-10 2.6E-14 100.0 8.4 107 57-216 37-144 (246)
57 3mcz_A O-methyltransferase; ad 99.0 8.7E-09 3E-13 99.2 16.3 153 58-282 180-335 (352)
58 2qe6_A Uncharacterized protein 99.0 6.1E-09 2.1E-13 97.7 14.6 147 57-283 77-239 (274)
59 2ip2_A Probable phenazine-spec 99.0 2E-08 6.7E-13 96.0 18.2 151 59-286 169-322 (334)
60 4e2x_A TCAB9; kijanose, tetron 99.0 6.3E-10 2.1E-14 109.8 7.7 145 57-287 107-254 (416)
61 3reo_A (ISO)eugenol O-methyltr 99.0 2.4E-08 8.3E-13 97.3 18.4 155 56-287 202-356 (368)
62 3bkw_A MLL3908 protein, S-aden 99.0 2.9E-09 9.8E-14 96.2 10.8 168 57-286 43-214 (243)
63 3pfg_A N-methyltransferase; N, 98.9 8.4E-09 2.9E-13 94.9 13.7 105 57-218 50-155 (263)
64 2r3s_A Uncharacterized protein 98.9 8.8E-09 3E-13 98.1 14.2 157 57-286 165-323 (335)
65 2kw5_A SLR1183 protein; struct 98.9 2E-09 6.7E-14 95.0 8.9 143 60-289 32-174 (202)
66 3dp7_A SAM-dependent methyltra 98.9 4.1E-09 1.4E-13 102.5 12.0 158 57-284 179-340 (363)
67 4fsd_A Arsenic methyltransfera 98.9 5.9E-09 2E-13 102.2 13.1 150 57-285 83-250 (383)
68 3jwg_A HEN1, methyltransferase 98.9 8.7E-09 3E-13 92.1 13.1 154 58-287 30-193 (219)
69 3g2m_A PCZA361.24; SAM-depende 98.9 1.2E-09 4E-14 102.9 7.7 170 59-288 84-276 (299)
70 3jwh_A HEN1; methyltransferase 98.9 9.7E-09 3.3E-13 91.8 13.2 151 58-284 30-190 (217)
71 3p9c_A Caffeic acid O-methyltr 98.9 4.2E-08 1.4E-12 95.5 17.5 153 56-286 200-353 (364)
72 2gs9_A Hypothetical protein TT 98.9 2.1E-08 7.2E-13 88.9 14.1 135 57-276 36-171 (211)
73 4a6d_A Hydroxyindole O-methylt 98.9 3.6E-08 1.2E-12 95.6 16.4 155 56-285 178-333 (353)
74 3i9f_A Putative type 11 methyl 98.9 1.4E-08 4.8E-13 87.0 11.8 132 57-286 17-148 (170)
75 2vdw_A Vaccinia virus capping 98.9 1.3E-09 4.4E-14 103.9 5.7 175 57-286 48-246 (302)
76 2i62_A Nicotinamide N-methyltr 98.9 7.9E-09 2.7E-13 94.5 10.8 151 56-287 55-240 (265)
77 1qzz_A RDMB, aclacinomycin-10- 98.9 1.6E-08 5.6E-13 97.9 13.4 156 56-287 181-340 (374)
78 3bxo_A N,N-dimethyltransferase 98.9 1.6E-08 5.4E-13 91.1 12.3 105 57-218 40-145 (239)
79 3cgg_A SAM-dependent methyltra 98.9 1.5E-08 5.1E-13 87.8 11.2 129 57-286 46-175 (195)
80 3giw_A Protein of unknown func 98.9 1.1E-08 3.7E-13 96.3 11.0 153 57-286 78-247 (277)
81 2zfu_A Nucleomethylin, cerebra 98.8 8.5E-09 2.9E-13 91.9 9.6 112 57-285 67-178 (215)
82 1tw3_A COMT, carminomycin 4-O- 98.8 3.9E-08 1.4E-12 94.8 14.2 155 57-287 183-340 (360)
83 1fp1_D Isoliquiritigenin 2'-O- 98.8 9.1E-08 3.1E-12 93.1 16.5 152 57-286 209-360 (372)
84 2avn_A Ubiquinone/menaquinone 98.8 4.8E-09 1.6E-13 96.7 6.3 157 57-288 54-215 (260)
85 1ve3_A Hypothetical protein PH 98.8 1.1E-08 3.9E-13 91.3 8.4 106 58-216 39-144 (227)
86 3ggd_A SAM-dependent methyltra 98.8 1.1E-07 3.6E-12 86.4 14.6 156 57-287 56-220 (245)
87 3thr_A Glycine N-methyltransfe 98.8 3.2E-08 1.1E-12 92.3 11.3 112 57-216 57-177 (293)
88 1x19_A CRTF-related protein; m 98.7 4.5E-08 1.5E-12 94.7 11.6 158 56-286 189-348 (359)
89 3d2l_A SAM-dependent methyltra 98.7 6.5E-09 2.2E-13 93.9 5.2 105 58-216 34-139 (243)
90 2xvm_A Tellurite resistance pr 98.7 1.6E-08 5.6E-13 88.2 7.3 140 58-286 33-173 (199)
91 3opn_A Putative hemolysin; str 98.7 3.3E-08 1.1E-12 90.6 9.4 144 56-286 36-184 (232)
92 3ofk_A Nodulation protein S; N 98.7 1.4E-08 4.8E-13 90.4 6.6 105 56-216 50-156 (216)
93 3g07_A 7SK snRNA methylphospha 98.7 2.9E-08 9.8E-13 93.6 9.1 48 135-214 173-220 (292)
94 3hp7_A Hemolysin, putative; st 98.7 4.7E-08 1.6E-12 92.8 10.4 147 57-286 85-232 (291)
95 2p8j_A S-adenosylmethionine-de 98.7 1E-08 3.6E-13 90.5 5.5 157 57-285 23-182 (209)
96 3m70_A Tellurite resistance pr 98.7 3.3E-08 1.1E-12 92.1 8.1 140 57-285 120-259 (286)
97 2ld4_A Anamorsin; methyltransf 98.7 2.1E-07 7.2E-12 80.3 12.3 121 57-285 12-133 (176)
98 3q87_B N6 adenine specific DNA 98.7 2E-07 6.7E-12 80.7 11.9 72 58-156 24-95 (170)
99 1zg3_A Isoflavanone 4'-O-methy 98.7 1.6E-07 5.4E-12 90.8 12.4 150 58-286 194-347 (358)
100 1fp2_A Isoflavone O-methyltran 98.6 5E-07 1.7E-11 87.1 15.6 150 57-286 188-341 (352)
101 3mq2_A 16S rRNA methyltransfer 98.6 1.9E-07 6.3E-12 83.4 10.8 151 57-287 27-185 (218)
102 4df3_A Fibrillarin-like rRNA/T 98.6 9.9E-08 3.4E-12 87.7 8.1 106 57-216 77-184 (233)
103 1yzh_A TRNA (guanine-N(7)-)-me 98.6 1.3E-07 4.4E-12 84.5 8.6 163 58-284 42-211 (214)
104 1wzn_A SAM-dependent methyltra 98.6 2.2E-07 7.6E-12 84.5 9.6 106 57-216 41-147 (252)
105 3grz_A L11 mtase, ribosomal pr 98.5 9.9E-08 3.4E-12 84.3 6.3 122 58-286 61-185 (205)
106 3iv6_A Putative Zn-dependent a 98.5 1.9E-07 6.5E-12 87.2 7.8 100 57-215 45-149 (261)
107 1p91_A Ribosomal RNA large sub 98.5 1E-06 3.5E-11 81.0 11.6 99 57-219 85-183 (269)
108 1zx0_A Guanidinoacetate N-meth 98.4 1.4E-07 4.8E-12 85.5 5.3 109 57-215 60-171 (236)
109 3q7e_A Protein arginine N-meth 98.4 3.3E-07 1.1E-11 88.7 8.0 104 58-213 67-172 (349)
110 3dxy_A TRNA (guanine-N(7)-)-me 98.4 9.1E-08 3.1E-12 86.6 3.7 139 25-214 3-150 (218)
111 3e05_A Precorrin-6Y C5,15-meth 98.4 2.8E-07 9.7E-12 81.4 6.6 103 57-215 40-143 (204)
112 2plw_A Ribosomal RNA methyltra 98.4 8.2E-07 2.8E-11 77.9 9.3 111 57-217 22-157 (201)
113 2pxx_A Uncharacterized protein 98.4 1.3E-06 4.3E-11 76.9 10.5 120 57-218 42-163 (215)
114 3m33_A Uncharacterized protein 98.4 1.5E-06 5.1E-11 78.2 10.9 69 57-146 48-118 (226)
115 3hm2_A Precorrin-6Y C5,15-meth 98.4 1.3E-06 4.6E-11 74.7 8.9 99 57-216 25-129 (178)
116 1dus_A MJ0882; hypothetical pr 98.3 4.8E-07 1.6E-11 78.1 5.7 107 57-218 52-161 (194)
117 3r0q_C Probable protein argini 98.3 9E-07 3.1E-11 86.5 8.3 105 57-214 63-169 (376)
118 3dmg_A Probable ribosomal RNA 98.3 5.6E-07 1.9E-11 88.4 6.7 109 57-215 233-341 (381)
119 1ej0_A FTSJ; methyltransferase 98.3 8.7E-07 3E-11 74.9 6.8 112 57-219 22-141 (180)
120 3p9n_A Possible methyltransfer 98.3 9.4E-07 3.2E-11 77.1 7.0 107 57-219 44-158 (189)
121 3mti_A RRNA methylase; SAM-dep 98.3 1.2E-06 4.1E-11 75.9 7.5 110 57-215 22-136 (185)
122 3evz_A Methyltransferase; NYSG 98.3 6.3E-06 2.2E-10 73.8 12.5 124 57-215 55-180 (230)
123 2nxc_A L11 mtase, ribosomal pr 98.3 1.2E-06 4.1E-11 80.9 7.8 124 58-286 121-244 (254)
124 1xdz_A Methyltransferase GIDB; 98.3 1.3E-06 4.4E-11 79.5 7.8 99 57-214 70-174 (240)
125 2fca_A TRNA (guanine-N(7)-)-me 98.3 9.3E-07 3.2E-11 79.3 6.8 110 57-214 38-153 (213)
126 3lpm_A Putative methyltransfer 98.2 7.9E-06 2.7E-10 75.1 12.0 123 57-214 49-176 (259)
127 3eey_A Putative rRNA methylase 98.2 2.9E-06 9.8E-11 74.2 8.5 115 58-215 23-140 (197)
128 2fyt_A Protein arginine N-meth 98.2 3E-06 1E-10 81.7 9.4 103 57-211 64-168 (340)
129 3p2e_A 16S rRNA methylase; met 98.2 4.5E-06 1.5E-10 75.8 9.9 152 57-287 24-186 (225)
130 4dcm_A Ribosomal RNA large sub 98.2 1E-06 3.4E-11 86.4 5.9 109 58-215 223-335 (375)
131 3lbf_A Protein-L-isoaspartate 98.2 1.8E-06 6.2E-11 76.3 6.9 97 57-216 77-176 (210)
132 3ckk_A TRNA (guanine-N(7)-)-me 98.2 2.3E-06 7.9E-11 78.2 7.4 111 56-214 45-168 (235)
133 2b3t_A Protein methyltransfera 98.2 6E-06 2.1E-10 76.7 10.3 122 58-214 110-238 (276)
134 1af7_A Chemotaxis receptor met 98.2 1.1E-06 3.7E-11 82.6 5.2 113 57-212 105-250 (274)
135 1nt2_A Fibrillarin-like PRE-rR 98.2 3.4E-06 1.2E-10 75.7 7.8 99 57-215 57-162 (210)
136 1fbn_A MJ fibrillarin homologu 98.2 5.3E-06 1.8E-10 74.8 9.1 100 57-215 74-179 (230)
137 4dzr_A Protein-(glutamine-N5) 98.2 8.3E-07 2.8E-11 78.0 3.6 130 56-216 29-166 (215)
138 3sso_A Methyltransferase; macr 98.1 2.1E-06 7.2E-11 84.7 6.3 99 57-216 216-326 (419)
139 2pjd_A Ribosomal RNA small sub 98.1 5.3E-07 1.8E-11 86.9 2.0 108 58-215 197-304 (343)
140 1l3i_A Precorrin-6Y methyltran 98.1 2.4E-06 8.1E-11 73.5 5.7 100 57-215 33-135 (192)
141 1vbf_A 231AA long hypothetical 98.1 5.2E-06 1.8E-10 74.4 7.9 78 57-152 70-147 (231)
142 3orh_A Guanidinoacetate N-meth 98.1 3.2E-06 1.1E-10 77.0 6.6 105 57-213 60-169 (236)
143 2yxd_A Probable cobalt-precorr 98.1 7.7E-06 2.6E-10 69.8 8.6 74 57-148 35-109 (183)
144 3id6_C Fibrillarin-like rRNA/T 98.1 1E-06 3.5E-11 80.8 2.7 104 19-149 50-156 (232)
145 3g89_A Ribosomal RNA small sub 98.1 7E-06 2.4E-10 75.6 8.1 100 56-214 79-184 (249)
146 2nyu_A Putative ribosomal RNA 98.1 6.5E-06 2.2E-10 71.6 7.5 117 57-217 22-148 (196)
147 1g6q_1 HnRNP arginine N-methyl 98.1 3.8E-06 1.3E-10 80.5 6.3 103 58-212 39-143 (328)
148 2yxe_A Protein-L-isoaspartate 98.1 5.5E-06 1.9E-10 73.4 6.9 81 57-153 77-160 (215)
149 3fzg_A 16S rRNA methylase; met 98.1 7.7E-07 2.6E-11 79.4 1.3 81 57-157 49-133 (200)
150 2ozv_A Hypothetical protein AT 98.1 9.3E-06 3.2E-10 75.1 8.6 123 57-215 36-171 (260)
151 3njr_A Precorrin-6Y methylase; 98.1 1.2E-05 4.2E-10 71.4 9.1 97 57-215 55-155 (204)
152 3htx_A HEN1; HEN1, small RNA m 98.1 3E-05 1E-09 82.6 13.1 110 57-217 721-837 (950)
153 2esr_A Methyltransferase; stru 98.1 3E-06 1E-10 72.8 4.7 108 57-219 31-143 (177)
154 2ift_A Putative methylase HI07 98.0 3.8E-06 1.3E-10 74.5 4.0 77 58-150 54-136 (201)
155 3gjy_A Spermidine synthase; AP 98.0 2E-05 6.8E-10 75.5 9.0 111 56-216 88-202 (317)
156 2frn_A Hypothetical protein PH 97.9 2.6E-05 8.8E-10 72.8 9.2 98 58-217 126-228 (278)
157 4hc4_A Protein arginine N-meth 97.9 2.7E-05 9.2E-10 76.3 9.5 135 18-212 50-187 (376)
158 3uwp_A Histone-lysine N-methyl 97.9 3.4E-05 1.1E-09 76.5 10.2 103 57-215 173-289 (438)
159 3mb5_A SAM-dependent methyltra 97.9 1.9E-05 6.4E-10 71.9 7.8 100 57-215 93-195 (255)
160 3gdh_A Trimethylguanosine synt 97.9 6.4E-07 2.2E-11 81.1 -2.2 81 58-156 79-161 (241)
161 1o9g_A RRNA methyltransferase; 97.9 2.6E-05 9E-10 71.0 8.6 42 57-111 51-92 (250)
162 2ipx_A RRNA 2'-O-methyltransfe 97.9 1.6E-05 5.6E-10 71.6 6.9 102 57-216 77-184 (233)
163 2b25_A Hypothetical protein; s 97.9 1E-05 3.5E-10 77.3 5.8 157 58-287 106-282 (336)
164 1jsx_A Glucose-inhibited divis 97.9 1.2E-05 4E-10 70.7 5.7 98 58-215 66-166 (207)
165 2pbf_A Protein-L-isoaspartate 97.9 1E-05 3.5E-10 72.4 4.8 105 58-216 81-195 (227)
166 1dl5_A Protein-L-isoaspartate 97.9 1.6E-05 5.6E-10 75.5 6.5 80 57-152 75-157 (317)
167 3bwc_A Spermidine synthase; SA 97.8 3.2E-05 1.1E-09 73.3 8.2 108 56-215 94-211 (304)
168 3dou_A Ribosomal RNA large sub 97.8 6.5E-05 2.2E-09 66.3 9.7 106 57-216 25-141 (191)
169 2fpo_A Methylase YHHF; structu 97.8 1.1E-05 3.9E-10 71.4 4.4 78 58-151 55-134 (202)
170 2fhp_A Methylase, putative; al 97.8 7.1E-06 2.4E-10 70.6 3.0 78 57-150 44-127 (187)
171 3adn_A Spermidine synthase; am 97.8 0.00013 4.5E-09 68.9 12.0 110 56-216 82-200 (294)
172 1i1n_A Protein-L-isoaspartate 97.8 1.9E-05 6.4E-10 70.6 5.8 79 57-151 77-163 (226)
173 1i9g_A Hypothetical protein RV 97.8 3.8E-05 1.3E-09 70.8 7.9 101 58-215 100-204 (280)
174 3fpf_A Mtnas, putative unchara 97.8 2.6E-05 8.7E-10 74.1 6.7 98 56-214 121-222 (298)
175 1jg1_A PIMT;, protein-L-isoasp 97.8 1.5E-05 5.3E-10 71.9 4.9 76 58-152 92-171 (235)
176 1g8a_A Fibrillarin-like PRE-rR 97.8 6.6E-05 2.3E-09 67.1 9.0 102 57-215 73-179 (227)
177 3u81_A Catechol O-methyltransf 97.8 9.8E-06 3.4E-10 72.5 3.2 103 58-216 59-172 (221)
178 1r18_A Protein-L-isoaspartate( 97.8 2.9E-05 9.9E-10 69.6 6.1 85 58-152 85-176 (227)
179 2h00_A Methyltransferase 10 do 97.7 1.5E-05 5.1E-10 72.7 4.0 79 57-153 65-154 (254)
180 2y1w_A Histone-arginine methyl 97.7 3.5E-05 1.2E-09 74.3 6.5 76 57-150 50-127 (348)
181 3dr5_A Putative O-methyltransf 97.7 2E-05 6.9E-10 71.2 4.0 103 58-215 57-164 (221)
182 1u2z_A Histone-lysine N-methyl 97.7 0.00012 4.1E-09 72.9 9.6 101 57-213 242-358 (433)
183 1o54_A SAM-dependent O-methylt 97.7 7E-05 2.4E-09 69.3 7.5 100 58-215 113-214 (277)
184 1yb2_A Hypothetical protein TA 97.7 6.3E-05 2.2E-09 69.7 6.9 101 57-215 110-212 (275)
185 3ntv_A MW1564 protein; rossman 97.7 1.4E-05 4.7E-10 72.4 2.3 98 58-215 72-177 (232)
186 1ws6_A Methyltransferase; stru 97.7 1.6E-05 5.5E-10 67.2 2.5 107 58-219 42-152 (171)
187 2wa2_A Non-structural protein 97.7 9.8E-05 3.4E-09 69.2 8.2 106 57-216 82-195 (276)
188 2vdv_E TRNA (guanine-N(7)-)-me 97.7 9.7E-05 3.3E-09 67.2 7.8 113 57-214 49-173 (246)
189 3bzb_A Uncharacterized protein 97.6 5.7E-05 1.9E-09 70.5 5.9 106 58-217 80-208 (281)
190 2xyq_A Putative 2'-O-methyl tr 97.6 0.00028 9.6E-09 66.6 10.7 108 57-217 63-174 (290)
191 1uir_A Polyamine aminopropyltr 97.6 4.5E-05 1.5E-09 72.6 5.2 110 57-216 77-197 (314)
192 2gpy_A O-methyltransferase; st 97.6 5.8E-05 2E-09 67.9 5.7 102 58-215 55-161 (233)
193 2oxt_A Nucleoside-2'-O-methylt 97.6 0.00016 5.5E-09 67.3 8.6 106 57-216 74-187 (265)
194 1ixk_A Methyltransferase; open 97.6 0.00012 4E-09 69.7 7.8 124 58-216 119-248 (315)
195 2p41_A Type II methyltransfera 97.6 5.9E-05 2E-09 71.7 5.6 101 58-217 83-194 (305)
196 3tfw_A Putative O-methyltransf 97.6 3.8E-05 1.3E-09 70.3 4.0 100 58-215 64-171 (248)
197 2bm8_A Cephalosporin hydroxyla 97.6 0.00012 4.2E-09 66.6 7.1 40 58-108 82-121 (236)
198 1sqg_A SUN protein, FMU protei 97.5 0.00017 5.6E-09 71.6 8.4 125 58-216 247-376 (429)
199 3tma_A Methyltransferase; thum 97.5 8.7E-05 3E-09 71.4 5.6 115 57-215 203-318 (354)
200 1inl_A Spermidine synthase; be 97.5 9.9E-05 3.4E-09 69.6 5.9 108 57-215 90-206 (296)
201 2pwy_A TRNA (adenine-N(1)-)-me 97.5 0.00016 5.6E-09 65.4 7.1 100 57-215 96-199 (258)
202 3r3h_A O-methyltransferase, SA 97.5 0.00012 4E-09 67.0 5.5 101 58-216 61-172 (242)
203 1iy9_A Spermidine synthase; ro 97.4 0.00018 6.1E-09 67.1 6.8 107 57-215 75-190 (275)
204 3b3j_A Histone-arginine methyl 97.4 0.0001 3.4E-09 74.5 4.9 75 58-150 159-235 (480)
205 3duw_A OMT, O-methyltransferas 97.4 5E-05 1.7E-09 67.6 2.3 100 58-215 59-168 (223)
206 1xj5_A Spermidine synthase 1; 97.4 0.00018 6.1E-09 69.3 5.9 106 57-214 120-235 (334)
207 1mjf_A Spermidine synthase; sp 97.4 0.00013 4.6E-09 68.1 4.9 106 57-215 75-194 (281)
208 2o07_A Spermidine synthase; st 97.3 0.00019 6.3E-09 68.1 5.5 108 56-215 94-210 (304)
209 3ajd_A Putative methyltransfer 97.3 0.00012 4E-09 68.1 3.9 121 58-217 84-214 (274)
210 2igt_A SAM dependent methyltra 97.3 0.00045 1.5E-08 66.3 8.0 113 58-218 154-276 (332)
211 2yvl_A TRMI protein, hypotheti 97.3 0.00037 1.3E-08 62.6 6.9 99 57-215 91-191 (248)
212 2pt6_A Spermidine synthase; tr 97.3 0.0002 6.9E-09 68.4 5.4 106 57-215 116-231 (321)
213 1zq9_A Probable dimethyladenos 97.3 8E-05 2.7E-09 69.9 2.5 79 57-154 28-108 (285)
214 2frx_A Hypothetical protein YE 97.3 0.00026 9E-09 71.4 6.4 124 57-216 117-248 (479)
215 3kr9_A SAM-dependent methyltra 97.3 0.00096 3.3E-08 60.7 9.4 45 57-116 15-59 (225)
216 2b2c_A Spermidine synthase; be 97.3 0.00024 8.2E-09 67.8 5.5 109 57-214 108-222 (314)
217 3tr6_A O-methyltransferase; ce 97.3 0.00012 4E-09 65.1 3.1 100 58-215 65-175 (225)
218 2hnk_A SAM-dependent O-methylt 97.3 8.7E-05 3E-09 67.1 2.2 103 58-215 61-182 (239)
219 3lec_A NADB-rossmann superfami 97.3 0.0012 4.1E-08 60.3 9.7 103 57-214 21-125 (230)
220 1sui_A Caffeoyl-COA O-methyltr 97.3 0.00018 6E-09 66.0 4.2 100 57-214 79-190 (247)
221 3lcv_B Sisomicin-gentamicin re 97.2 0.0002 6.9E-09 66.8 4.3 117 56-193 131-259 (281)
222 2i7c_A Spermidine synthase; tr 97.2 0.00027 9.3E-09 66.1 5.0 108 56-215 77-193 (283)
223 2yxl_A PH0851 protein, 450AA l 97.2 0.00077 2.6E-08 67.2 8.3 125 58-217 260-392 (450)
224 3m6w_A RRNA methylase; rRNA me 97.2 0.00025 8.7E-09 71.2 4.6 127 57-216 101-231 (464)
225 1ne2_A Hypothetical protein TA 97.1 0.00068 2.3E-08 59.1 6.7 75 57-154 51-125 (200)
226 3c3p_A Methyltransferase; NP_9 97.1 0.00014 4.6E-09 64.3 2.1 102 58-215 57-161 (210)
227 1wy7_A Hypothetical protein PH 97.1 0.0022 7.6E-08 56.0 9.9 78 57-153 49-126 (207)
228 3c3y_A Pfomt, O-methyltransfer 97.1 0.00059 2E-08 61.8 6.0 101 57-215 70-182 (237)
229 1nv8_A HEMK protein; class I a 97.1 0.00025 8.5E-09 66.5 3.5 68 58-146 124-199 (284)
230 3frh_A 16S rRNA methylase; met 97.1 0.00035 1.2E-08 64.4 4.4 112 57-190 105-226 (253)
231 3a27_A TYW2, uncharacterized p 97.1 0.00062 2.1E-08 63.2 5.9 101 57-218 119-223 (272)
232 2f8l_A Hypothetical protein LM 97.0 0.0014 4.8E-08 62.7 7.9 128 57-216 130-258 (344)
233 4dmg_A Putative uncharacterize 96.9 0.00073 2.5E-08 66.4 5.2 108 58-215 215-327 (393)
234 3cbg_A O-methyltransferase; cy 96.9 0.0003 1E-08 63.5 2.2 103 58-215 73-183 (232)
235 2avd_A Catechol-O-methyltransf 96.9 0.00045 1.5E-08 61.5 3.1 100 58-215 70-180 (229)
236 1wxx_A TT1595, hypothetical pr 96.8 0.0049 1.7E-07 59.9 10.2 110 58-216 210-327 (382)
237 2ih2_A Modification methylase 96.8 0.0061 2.1E-07 59.3 10.7 121 58-216 40-166 (421)
238 3tm4_A TRNA (guanine N2-)-meth 96.8 0.00072 2.5E-08 65.7 3.7 78 58-150 218-297 (373)
239 3m4x_A NOL1/NOP2/SUN family pr 96.7 0.00064 2.2E-08 68.2 3.1 123 57-216 105-236 (456)
240 3gnl_A Uncharacterized protein 96.7 0.0016 5.6E-08 59.9 5.5 103 57-214 21-125 (244)
241 2cmg_A Spermidine synthase; tr 96.7 0.0019 6.5E-08 59.8 5.6 34 57-107 72-105 (262)
242 2qm3_A Predicted methyltransfe 96.6 0.0031 1.1E-07 61.1 7.3 104 58-216 173-280 (373)
243 2b78_A Hypothetical protein SM 96.6 0.0036 1.2E-07 61.1 7.3 111 58-216 213-333 (385)
244 2as0_A Hypothetical protein PH 96.5 0.0034 1.2E-07 61.2 6.6 111 58-216 218-337 (396)
245 3k6r_A Putative transferase PH 96.5 0.01 3.6E-07 55.5 9.6 70 58-146 126-199 (278)
246 3v97_A Ribosomal RNA large sub 96.4 0.0019 6.4E-08 68.1 4.6 114 58-217 540-660 (703)
247 2yx1_A Hypothetical protein MJ 96.3 0.0028 9.5E-08 60.7 4.4 95 58-218 196-295 (336)
248 1yub_A Ermam, rRNA methyltrans 96.2 0.0014 4.8E-08 59.6 1.8 73 57-148 29-102 (245)
249 3gru_A Dimethyladenosine trans 96.1 0.015 5.2E-07 54.8 8.3 78 57-153 50-128 (295)
250 4gqb_A Protein arginine N-meth 95.9 0.017 5.8E-07 60.1 8.5 131 21-211 332-464 (637)
251 3evf_A RNA-directed RNA polyme 95.9 0.053 1.8E-06 50.6 10.9 51 133-216 134-186 (277)
252 2h1r_A Dimethyladenosine trans 95.9 0.0043 1.5E-07 58.4 3.6 76 57-153 42-120 (299)
253 3tqs_A Ribosomal RNA small sub 95.9 0.0076 2.6E-07 55.6 5.0 21 57-77 29-49 (255)
254 3c0k_A UPF0064 protein YCCW; P 95.8 0.004 1.4E-07 60.8 3.1 110 58-215 221-340 (396)
255 2okc_A Type I restriction enzy 95.8 0.022 7.4E-07 56.5 8.3 132 58-215 172-308 (445)
256 3khk_A Type I restriction-modi 95.6 0.073 2.5E-06 54.3 11.5 142 58-215 245-396 (544)
257 4azs_A Methyltransferase WBDD; 95.4 0.0039 1.3E-07 63.9 1.5 79 56-154 65-149 (569)
258 1qam_A ERMC' methyltransferase 95.3 0.0095 3.2E-07 54.2 3.5 75 57-151 30-106 (244)
259 3ua3_A Protein arginine N-meth 95.2 0.026 8.9E-07 59.2 6.5 110 20-145 386-501 (745)
260 2jjq_A Uncharacterized RNA met 95.0 0.065 2.2E-06 53.0 8.5 69 58-145 291-359 (425)
261 2qfm_A Spermine synthase; sper 94.9 0.016 5.3E-07 56.3 3.9 21 56-76 187-207 (364)
262 3ldu_A Putative methylase; str 94.6 0.082 2.8E-06 51.5 8.3 89 57-146 195-308 (385)
263 3s1s_A Restriction endonucleas 94.5 0.31 1E-05 52.0 12.6 124 57-215 321-466 (878)
264 3lkd_A Type I restriction-modi 94.4 0.063 2.2E-06 54.8 7.0 130 57-215 221-359 (542)
265 3fut_A Dimethyladenosine trans 94.4 0.068 2.3E-06 49.6 6.7 73 60-151 49-122 (271)
266 3gcz_A Polyprotein; flavivirus 94.3 0.11 3.7E-06 48.6 7.8 104 58-216 91-203 (282)
267 1uwv_A 23S rRNA (uracil-5-)-me 94.2 0.13 4.4E-06 50.7 8.8 68 58-145 287-362 (433)
268 3ldg_A Putative uncharacterize 94.2 0.059 2E-06 52.6 6.2 88 58-146 195-307 (384)
269 3k0b_A Predicted N6-adenine-sp 94.1 0.071 2.4E-06 52.1 6.5 89 57-146 201-314 (393)
270 2dul_A N(2),N(2)-dimethylguano 93.9 0.024 8.3E-07 55.2 2.7 43 58-115 48-90 (378)
271 2b9e_A NOL1/NOP2/SUN domain fa 93.3 0.17 5.9E-06 47.7 7.5 72 58-145 103-180 (309)
272 2ar0_A M.ecoki, type I restric 92.5 0.2 6.8E-06 51.0 7.1 21 195-215 293-313 (541)
273 3axs_A Probable N(2),N(2)-dime 91.5 0.25 8.6E-06 48.3 6.2 45 58-116 53-97 (392)
274 3ftd_A Dimethyladenosine trans 91.4 0.02 6.9E-07 52.4 -1.7 40 57-112 31-70 (249)
275 1qyr_A KSGA, high level kasuga 91.4 0.2 7E-06 45.7 5.1 78 58-154 22-113 (252)
276 3eld_A Methyltransferase; flav 91.3 0.57 1.9E-05 44.0 8.0 104 56-216 80-193 (300)
277 3uzu_A Ribosomal RNA small sub 91.3 0.049 1.7E-06 50.8 0.8 20 57-76 42-61 (279)
278 2wk1_A NOVP; transferase, O-me 90.3 1.8 6E-05 40.3 10.4 20 57-76 106-125 (282)
279 2zig_A TTHA0409, putative modi 90.2 0.47 1.6E-05 44.1 6.5 28 188-215 71-98 (297)
280 3v97_A Ribosomal RNA large sub 89.6 0.76 2.6E-05 48.2 8.1 20 58-77 191-210 (703)
281 3lkz_A Non-structural protein 85.8 4.8 0.00016 37.9 10.1 36 58-108 95-130 (321)
282 2px2_A Genome polyprotein [con 85.3 1.7 5.9E-05 40.0 6.8 21 56-76 72-92 (269)
283 3o4f_A Spermidine synthase; am 84.6 5.1 0.00018 37.4 9.9 22 195-216 179-200 (294)
284 2qy6_A UPF0209 protein YFCK; s 84.0 0.49 1.7E-05 43.4 2.6 24 56-79 59-82 (257)
285 4auk_A Ribosomal RNA large sub 82.6 2.3 8E-05 41.1 6.8 72 57-151 211-282 (375)
286 2k4m_A TR8_protein, UPF0146 pr 82.4 1.9 6.6E-05 36.4 5.4 33 58-106 36-69 (153)
287 2r6z_A UPF0341 protein in RSP 79.7 0.56 1.9E-05 42.9 1.3 74 58-151 84-173 (258)
288 1m6y_A S-adenosyl-methyltransf 79.0 1 3.5E-05 42.2 2.9 74 58-146 27-105 (301)
289 3bt7_A TRNA (uracil-5-)-methyl 77.8 3.1 0.00011 39.7 6.0 18 59-76 215-232 (369)
290 1boo_A Protein (N-4 cytosine-s 69.8 7.5 0.00026 36.4 6.3 28 189-216 59-86 (323)
291 3ll7_A Putative methyltransfer 67.9 1.8 6.2E-05 42.4 1.6 19 58-76 94-112 (410)
292 3r24_A NSP16, 2'-O-methyl tran 62.9 15 0.0005 34.7 6.6 64 56-148 108-178 (344)
293 2oyr_A UPF0341 protein YHIQ; a 62.4 2.6 8.9E-05 38.6 1.4 18 59-76 90-107 (258)
294 3ufb_A Type I restriction-modi 60.7 53 0.0018 32.8 11.0 22 58-79 218-239 (530)
295 3vyw_A MNMC2; tRNA wobble urid 57.1 6.7 0.00023 36.9 3.3 23 56-78 95-117 (308)
296 1g60_A Adenine-specific methyl 55.5 16 0.00056 32.7 5.6 23 192-214 52-74 (260)
297 2zig_A TTHA0409, putative modi 55.4 8 0.00028 35.5 3.6 19 58-76 236-254 (297)
298 3p8z_A Mtase, non-structural p 52.0 5.8 0.0002 36.2 1.9 36 58-108 79-114 (267)
299 2vz8_A Fatty acid synthase; tr 50.0 16 0.00055 43.8 5.7 79 57-151 1240-1323(2512)
300 4fzv_A Putative methyltransfer 41.5 41 0.0014 32.1 6.1 44 58-116 149-192 (359)
301 1eg2_A Modification methylase 40.8 22 0.00074 33.2 4.0 23 193-215 85-107 (319)
302 3pvc_A TRNA 5-methylaminomethy 40.8 14 0.00047 38.2 2.9 23 56-78 57-79 (689)
303 1i4w_A Mitochondrial replicati 40.2 38 0.0013 32.2 5.7 44 57-105 58-115 (353)
304 3c6k_A Spermine synthase; sper 35.2 32 0.0011 33.2 4.3 20 195-214 312-331 (381)
305 3ps9_A TRNA 5-methylaminomethy 33.1 21 0.00072 36.6 2.8 24 56-79 65-88 (676)
306 1g60_A Adenine-specific methyl 27.3 45 0.0016 29.7 3.7 19 58-76 213-231 (260)
307 2lmc_A Bacterial RNA polymeras 24.7 46 0.0016 24.6 2.5 32 254-286 45-80 (84)
308 2v1n_A KIN17, protein KIN homo 23.5 46 0.0016 26.4 2.5 26 177-202 11-36 (111)
309 3eb9_A 6-phosphogluconolactona 23.4 3.9E+02 0.013 23.7 9.5 37 62-103 38-75 (266)
310 4hhu_A OR280; engineered prote 23.0 64 0.0022 25.9 3.3 57 168-245 41-107 (170)
311 1wg8_A Predicted S-adenosylmet 23.0 44 0.0015 30.9 2.7 20 58-77 23-42 (285)
312 1wg8_A Predicted S-adenosylmet 22.6 57 0.0019 30.2 3.4 33 183-215 202-234 (285)
313 3tka_A Ribosomal RNA small sub 22.2 68 0.0023 30.5 3.9 33 183-215 243-275 (347)
314 1m6y_A S-adenosyl-methyltransf 21.6 58 0.002 30.1 3.3 33 183-215 214-246 (301)
315 1q1h_A TFE, transcription fact 20.6 39 0.0013 25.6 1.6 42 233-274 48-93 (110)
316 2uyo_A Hypothetical protein ML 20.1 5E+02 0.017 23.6 14.6 74 194-281 198-274 (310)
No 1
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=9.4e-92 Score=687.29 Aligned_cols=340 Identities=34% Similarity=0.531 Sum_probs=308.0
Q ss_pred ccc-eeeeccCCCCccchHHhhHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHH
Q 018250 4 DEV-VTFPMMGGDGTCSYAHNSQFQRGTVDAAKELVREAIVNKLDVGSYGYDNSYTVRIADLGCSVGPNTFISVQNIIEA 82 (359)
Q Consensus 4 ~~~-~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~nt~~~~~~ii~~ 82 (359)
|++ ++|||+||+|++||++||.+|++++..++|++++||.+++.... .+++++|||||||+|+||+.+++.||++
T Consensus 1 m~~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~----~~~~~~IaDlGCs~G~Nt~~~v~~ii~~ 76 (359)
T 1m6e_X 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDT----VTTRLAIADLGCSSGPNALFAVTELIKT 76 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSS----SSSEECCEEESCCSSTTTTTGGGTTHHH
T ss_pred CCcccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----CCCceEEEecCCCCCcchHHHHHHHHHH
Confidence 344 67999999999999999999999999999999999998664211 2578999999999999999999999999
Q ss_pred HHHHhhcCCC-CCCCceEEecCCCCCchHHHHHhCCC-----CcccccccCcccccCCCCCCceeEEEecCcccccCCCC
Q 018250 83 LEFKFQNLSL-PVPDFQVFFNDHTENDFNTLFRTLPP-----RKYYAAGVPGSFHGRLFPKSTLHVVNSFNAMHWLSKTP 156 (359)
Q Consensus 83 ~~~~~~~~~~-~~p~~~v~~nDLp~NDFn~lf~~l~~-----~~~~~~~vpgsfy~~l~p~~s~d~~~S~~alHWLs~~p 156 (359)
|+++|.+.+. +.|++||++||||+||||+||++|+. .+||++|||||||+||||++|+|++||++||||||++|
T Consensus 77 i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p 156 (359)
T 1m6e_X 77 VEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVP 156 (359)
T ss_dssp HHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCC
T ss_pred HHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCc
Confidence 9999976654 68999999999999999999999985 46999999999999999999999999999999999999
Q ss_pred cccccccccccCCCceeecCC-CHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHH
Q 018250 157 KVNMLEKSLEWNQGSIKCTRF-MKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFL 235 (359)
Q Consensus 157 ~~~~~~~~~~~n~g~i~~~~~-~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l 235 (359)
+.+.+ |||+|||+++ ||+|.+||++||++||..||++|++||||||+||++++|+++.++.++. .+.+|+.|
T Consensus 157 ~~l~~------nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~-~~~~~~~l 229 (359)
T 1m6e_X 157 IGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTE-CCLIWQLL 229 (359)
T ss_dssp SCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTT-TSTTTHHH
T ss_pred hhhhc------cCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccc-hHHHHHHH
Confidence 99887 9999999865 7889999999999999999999999999999999999999998766553 45678999
Q ss_pred HHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCCC----------CChhHHHHHHH
Q 018250 236 GSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHKT----------FPAQFYLSHLR 305 (359)
Q Consensus 236 ~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~~----------~~~~~v~~~iR 305 (359)
.++|++||.+|+|+++++|+|++|||+||.+||+++|+++|+|+|+++|.+++.....+ ..++.+++++|
T Consensus 230 ~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~~d~~~~~~~~g~~~a~~~R 309 (359)
T 1m6e_X 230 AMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNVARCMR 309 (359)
T ss_dssp HHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHHHHHHH
T ss_pred HHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccchhhhhhhhhHhHhHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999865322110 23578999999
Q ss_pred HHhhhhhhhccCHHHHHHHHHHHHHHHHHHhhhhhcCCcceEEEEEEEEecc
Q 018250 306 AVLEGLIGKHFGEELLENIFNHINTKEAEILSIHNGKLHKEIEVFVVLKRIS 357 (359)
Q Consensus 306 a~~~~~l~~~~~e~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~ 357 (359)
|+.+|++.+|||++++|++|+||++++.++++. ...++++++++|+|+.
T Consensus 310 a~~e~ll~~hfG~~i~d~lf~ry~~~~~~~~~~---~~~~~~~~~~~L~k~~ 358 (359)
T 1m6e_X 310 AVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSK---EKTKFINVIVSLIRKS 358 (359)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHS---SCCEEEEEEEEEEBCC
T ss_pred hhcchhhHHhccHHHHHHHHHHHHHHHHHHHhh---CCCceEEEEEEEEeCC
Confidence 999999999999999999999999999998875 4578999999999985
No 2
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=4.4e-91 Score=687.55 Aligned_cols=339 Identities=29% Similarity=0.527 Sum_probs=289.1
Q ss_pred eeeeccCCCCccchHHhhHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHHHHHH
Q 018250 7 VTFPMMGGDGTCSYAHNSQFQRGTVDAAKELVREAIVNKLDVGSYGYDNSYTVRIADLGCSVGPNTFISVQNIIEALEFK 86 (359)
Q Consensus 7 ~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~ 86 (359)
++|||+||+|++||++||. |++++..++|++++||.+++.. ..| ...++++|||||||+|+||+.+++.||++|+++
T Consensus 5 ~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~~-~~~-~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~~~ 81 (384)
T 2efj_A 5 EVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLRA-NLP-NINKCFKVGDLGCASGPNTFSTVRDIVQSIDKV 81 (384)
T ss_dssp TTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHHT-TCT-TTTTEEEEEEETCCSSHHHHHHHHHHHHHHTCC
T ss_pred cccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhhc-ccC-CcCCceEEEecCCCCCchHHHHHHHHHHHHHHH
Confidence 6799999999999999999 9999999999999999986532 111 012389999999999999999999999999998
Q ss_pred hhc--CCCCCCCceEEecCCCCCchHHHHHhCCC-------------CcccccccCcccccCCCCCCceeEEEecCcccc
Q 018250 87 FQN--LSLPVPDFQVFFNDHTENDFNTLFRTLPP-------------RKYYAAGVPGSFHGRLFPKSTLHVVNSFNAMHW 151 (359)
Q Consensus 87 ~~~--~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-------------~~~~~~~vpgsfy~~l~p~~s~d~~~S~~alHW 151 (359)
|.+ .+.+.|++||++||||+||||+||++||. .+||++|||||||+||||++|+|++||++||||
T Consensus 82 ~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHW 161 (384)
T 2efj_A 82 GQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHW 161 (384)
T ss_dssp ----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTB
T ss_pred hhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceEEEecchhhhhccCCCCceEEEEecceeee
Confidence 865 33457899999999999999999999973 269999999999999999999999999999999
Q ss_pred cCCCCcccccccccccCCCceeecCC-CHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccCCCC--CCCCCcch
Q 018250 152 LSKTPKVNMLEKSLEWNQGSIKCTRF-MKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITGPSG--IPFADTVQ 228 (359)
Q Consensus 152 Ls~~p~~~~~~~~~~~n~g~i~~~~~-~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~~--~~~~~~~~ 228 (359)
||++|+.+.++.+++||||+|||+++ ||+|.++|++||++||..||++|++||||||+||++++|+++. .+.+
T Consensus 162 ls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~---- 237 (384)
T 2efj_A 162 LSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNS---- 237 (384)
T ss_dssp CSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCH----
T ss_pred cCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCccc----
Confidence 99999999999999999999999865 7889999999999999999999999999999999999999986 5432
Q ss_pred hHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCC---C-----------
Q 018250 229 GATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHK---T----------- 294 (359)
Q Consensus 229 ~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~---~----------- 294 (359)
.+.|.++|++||.+|+|+++++|+|++|+|+||.+||+++|+++|+|+|+++|.++...... +
T Consensus 238 ---~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~~~~~~~~~ 314 (384)
T 2efj_A 238 ---MDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGRSHSPV 314 (384)
T ss_dssp ---HHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---------CCS
T ss_pred ---HHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeecccccccccccccccccccc
Confidence 14899999999999999999999999999999999999999999999999999986432211 0
Q ss_pred -----CChhHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHHHHHHHhhhhhcCCcceEEEEEEEEeccC
Q 018250 295 -----FPAQFYLSHLRAVLEGLIGKHFGEELLENIFNHINTKEAEILSIHNGKLHKEIEVFVVLKRISK 358 (359)
Q Consensus 295 -----~~~~~v~~~iRa~~~~~l~~~~~e~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~ 358 (359)
..++.+++++||+++|++.+|||++++|+||+||++++.++++. ...++++++++|+|+..
T Consensus 315 ~~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF~ry~~~~~~~~~~---~~~~~~~~~~~L~k~~~ 380 (384)
T 2efj_A 315 SCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKVLRS---GKGFYDSVIISLAKKPE 380 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHHHHH---TCCEEEEEEEEEEECC-
T ss_pred cchHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHHHHHHHHHHHHHhh---CCCceEEEEEEEEEccc
Confidence 11358899999999999999999999999999999999999885 45789999999999864
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=9.8e-90 Score=677.12 Aligned_cols=347 Identities=29% Similarity=0.482 Sum_probs=291.9
Q ss_pred ccc-eeeeccCCCCccchHHhhHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHH
Q 018250 4 DEV-VTFPMMGGDGTCSYAHNSQFQRGTVDAAKELVREAIVNKLDVGSYGYDNSYTVRIADLGCSVGPNTFISVQNIIEA 82 (359)
Q Consensus 4 ~~~-~~~~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~nt~~~~~~ii~~ 82 (359)
|++ ++|||+||+|++||++||.+|++++..++|++++||+++. .... ..+++++|||||||+|+||+.+++.||++
T Consensus 1 m~~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l~-~~~~--~~~~~~~IaDlGCssG~Nt~~~v~~ii~~ 77 (374)
T 3b5i_A 1 MKLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVH-LNSS--ASPPPFTAVDLGCSSGANTVHIIDFIVKH 77 (374)
T ss_dssp -------------------------CTTHHHHHHHHHHHHHTSC-CCCS--SSCCCEEEEEETCCSSHHHHHHHHHHHHH
T ss_pred CCcccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhh-cccc--CCCCceEEEecCCCCChhHHHHHHHHHHH
Confidence 344 6799999999999999999999999999999999998743 3210 02568999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----------------CcccccccCcccccCCCCCCceeEEEec
Q 018250 83 LEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----------------RKYYAAGVPGSFHGRLFPKSTLHVVNSF 146 (359)
Q Consensus 83 ~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----------------~~~~~~~vpgsfy~~l~p~~s~d~~~S~ 146 (359)
|++++...+.++|++||++||||+||||+||++|+. .+||++|||||||+||||++|+|++||+
T Consensus 78 i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss 157 (374)
T 3b5i_A 78 ISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSA 157 (374)
T ss_dssp HHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEE
T ss_pred HHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEec
Confidence 999998766678999999999999999999999985 2489999999999999999999999999
Q ss_pred CcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccCCCCCCCCCc
Q 018250 147 NAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITGPSGIPFADT 226 (359)
Q Consensus 147 ~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~ 226 (359)
+||||||++|+.+.++.+++||||+|||++++|+|.+||++||++||..||++|++||||||+||++++|+++..+.++.
T Consensus 158 ~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~ 237 (374)
T 3b5i_A 158 FSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQG 237 (374)
T ss_dssp SCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCH
T ss_pred ceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCcccccc
Confidence 99999999999999999999999999999988779999999999999999999999999999999999999998777666
Q ss_pred chhHHH-HHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCCC-------CChh
Q 018250 227 VQGATY-NFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHKT-------FPAQ 298 (359)
Q Consensus 227 ~~~~~~-~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~~-------~~~~ 298 (359)
+.+.+| +.|.++|++|+.+|+++++++|+|++|+|+||.+|++++|+++|+|+|++++.++++.+... ..++
T Consensus 238 ~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~~~~~~~g~ 317 (374)
T 3b5i_A 238 GAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEPDDASEVGR 317 (374)
T ss_dssp HHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSSTTCHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccccchhHHHHH
Confidence 666778 89999999999999999999999999999999999999999877799999999986543221 1246
Q ss_pred HHHHHHHHHhhhhhhhccCHHHHHHHHHHHHHHHHHHhhhhhcCCcc--eEEEEEEEE
Q 018250 299 FYLSHLRAVLEGLIGKHFGEELLENIFNHINTKEAEILSIHNGKLHK--EIEVFVVLK 354 (359)
Q Consensus 299 ~v~~~iRa~~~~~l~~~~~e~i~delf~r~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 354 (359)
.+++++||+.+|++.+|||++++|++|+||+++++++++.+. +.++ +++++|+|+
T Consensus 318 ~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 318 AFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSHAKDVL-VNLQFFHIVASLSFT 374 (374)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTCHHHH-TTCCCEEEEEEEEEC
T ss_pred HHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHHHhHHHhh-hccccceEEEEEEeC
Confidence 899999999999999999999999999999999999988654 3455 899999985
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=9.9e-17 Score=150.10 Aligned_cols=234 Identities=15% Similarity=0.172 Sum_probs=150.6
Q ss_pred eccCCCCccchHHhhHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHHHHHHhhc
Q 018250 10 PMMGGDGTCSYAHNSQFQRGTVDAAKELVREAIVNKLDVGSYGYDNSYTVRIADLGCSVGPNTFISVQNIIEALEFKFQN 89 (359)
Q Consensus 10 ~M~gG~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~ 89 (359)
.|...-.+..|++++..|......+...+ . .....+|+|+|||+|..+..++ +
T Consensus 25 ~~~~~w~a~~y~~~~~~~~~~~~~l~~~l--------~-------~~~~~~vLDiGcG~G~~~~~l~--------~---- 77 (279)
T 3ccf_A 25 TAKNFWDATLYQDKHSFVWQYGEDLLQLL--------N-------PQPGEFILDLGCGTGQLTEKIA--------Q---- 77 (279)
T ss_dssp ----------------CCSSSCCHHHHHH--------C-------CCTTCEEEEETCTTSHHHHHHH--------H----
T ss_pred cchhhcCHHHHhhcchHHHHHHHHHHHHh--------C-------CCCCCEEEEecCCCCHHHHHHH--------h----
Confidence 34433345678877777665554433332 1 1235799999999999998874 1
Q ss_pred CCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCCCceeEEEecCcccccCCCCcccccccccccCC
Q 018250 90 LSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQ 169 (359)
Q Consensus 90 ~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~ 169 (359)
+..+++..|+...+....-+..+. -.|.. +++....+ ++++|+|+|+.++||+.+
T Consensus 78 -----~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~---~d~~~~~~-~~~fD~v~~~~~l~~~~d--------------- 132 (279)
T 3ccf_A 78 -----SGAEVLGTDNAATMIEKARQNYPH-LHFDV---ADARNFRV-DKPLDAVFSNAMLHWVKE--------------- 132 (279)
T ss_dssp -----TTCEEEEEESCHHHHHHHHHHCTT-SCEEE---CCTTTCCC-SSCEEEEEEESCGGGCSC---------------
T ss_pred -----CCCeEEEEECCHHHHHHHHhhCCC-CEEEE---CChhhCCc-CCCcCEEEEcchhhhCcC---------------
Confidence 235899999987666554444321 11222 34544334 689999999999999653
Q ss_pred CceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCC
Q 018250 170 GSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVIS 249 (359)
Q Consensus 170 g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~ 249 (359)
...+|+.-++-|+|||++++.+.+.++. ..+.+.+...+... |.-
T Consensus 133 -----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~- 177 (279)
T 3ccf_A 133 -----------------------PEAAIASIHQALKSGGRFVAEFGGKGNI--------KYILEALYNALETL---GIH- 177 (279)
T ss_dssp -----------------------HHHHHHHHHHHEEEEEEEEEEEECTTTT--------HHHHHHHHHHHHHH---TCC-
T ss_pred -----------------------HHHHHHHHHHhcCCCcEEEEEecCCcch--------HHHHHHHHHHHHhc---CCc-
Confidence 2346777889999999999998876542 11233333333322 221
Q ss_pred hhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCCCCChhHHHHHHHHHhhhhhhhccCHHHHHHHHHHHH
Q 018250 250 EEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHKTFPAQFYLSHLRAVLEGLIGKHFGEELLENIFNHIN 329 (359)
Q Consensus 250 ~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~~~~~~~v~~~iRa~~~~~l~~~~~e~i~delf~r~~ 329 (359)
......|+++++.+++.++++++| |++..++.+..+..+. .+++.+..|++++..+++. .++++..+++.+++.
T Consensus 178 ---~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~ 251 (279)
T 3ccf_A 178 ---NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTLA-EGEFGMANWIQMFASAFLV-GLTPDQQVQLIRKVE 251 (279)
T ss_dssp ---CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEECS-SGGGHHHHHHHHHCHHHHT-TCCHHHHHHHHHHHH
T ss_pred ---cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEeccccccc-CCHHHHHHHHHHhhHHHhc-cCCHHHHHHHHHHHH
Confidence 223556788999999999999999 9999999887666552 1467889999988777776 488888999999988
Q ss_pred HHHHHHh
Q 018250 330 TKEAEIL 336 (359)
Q Consensus 330 ~~~~~~~ 336 (359)
+.+.+..
T Consensus 252 ~~~~~~~ 258 (279)
T 3ccf_A 252 ATLQDKL 258 (279)
T ss_dssp HHHHHHH
T ss_pred HHHHhhc
Confidence 8887654
No 5
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.68 E-value=9.7e-16 Score=140.90 Aligned_cols=224 Identities=13% Similarity=0.123 Sum_probs=147.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..++ +. ..+++..|+........-+.......-+..+.+++....+|
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 101 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLI--------AR---------GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLP 101 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHH--------TT---------TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSC
T ss_pred CCCEEEEeCCcCCHHHHHHH--------HC---------CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCC
Confidence 45799999999999998874 11 24789999887666655554411000111223466555688
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+++.++||+.+ ...+|+.-.+-|+|||++++.+..
T Consensus 102 ~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~~~~~ 143 (263)
T 2yqz_A 102 DESVHGVIVVHLWHLVPD--------------------------------------WPKVLAEAIRVLKPGGALLEGWDQ 143 (263)
T ss_dssp TTCEEEEEEESCGGGCTT--------------------------------------HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCeeEEEECCchhhcCC--------------------------------------HHHHHHHHHHHCCCCcEEEEEecC
Confidence 999999999999999652 234677778999999999999443
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHc-CCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCCCC
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKM-GVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHKTF 295 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~e-Gli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~~~ 295 (359)
.+.. .. ..+...|.++... |. + ...+.++++.+++.+.+++.| |++..++....+...
T Consensus 144 ~~~~---------~~-~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~~~~--- 202 (263)
T 2yqz_A 144 AEAS---------PE-WTLQERWRAFAAEEGF-P------VERGLHAKRLKEVEEALRRLG-LKPRTREVARWREER--- 202 (263)
T ss_dssp ECCC---------HH-HHHHHHHHHHHHHHTC-C------CCCCHHHHHHHHHHHHHHHTT-CCCEEEEEEEEEEEE---
T ss_pred CCcc---------HH-HHHHHHHHHHHHHhCC-C------cccccccCCHHHHHHHHHHcC-CCcceEEEeeeecCC---
Confidence 3210 11 1122233333221 21 0 122456778999999999999 998877665433222
Q ss_pred ChhHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHHHHHHHhhhhhcCCcceEEEEEEEEecc
Q 018250 296 PAQFYLSHLRAVLEGLIGKHFGEELLENIFNHINTKEAEILSIHNGKLHKEIEVFVVLKRIS 357 (359)
Q Consensus 296 ~~~~v~~~iRa~~~~~l~~~~~e~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~ 357 (359)
+++.+..++++...+.+. +++++..+++.+++.+.+.+.........+-+..++++..||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~rkp 263 (263)
T 2yqz_A 203 TPREALEALSERLYSFTQ-GLPEPVHARVMERLWAWAEAELGDLDRPFPVEKRFLLRVSRLG 263 (263)
T ss_dssp CHHHHHHHHHTTCSGGGS-SSCHHHHHHHHHHHHHHHHHHSSCTTSCEEEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHhhccccc-CCCHHHHHHHHHHHHHHHHHhcCCcCccccccceeEEEeeecC
Confidence 467888888776555554 5889999999999999888764422212344677778887775
No 6
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.68 E-value=3.8e-16 Score=143.49 Aligned_cols=230 Identities=12% Similarity=0.119 Sum_probs=147.9
Q ss_pred ccchHHhhHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCC
Q 018250 17 TCSYAHNSQFQRGTVDAAKELVREAIVNKLDVGSYGYDNSYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPD 96 (359)
Q Consensus 17 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~ 96 (359)
+..|++.+..|.+....++.. + . .....+|+|+|||+|..+..+. +.+ |.
T Consensus 8 ~~~y~~~~~~~~~~~~~l~~~--------~--~-----~~~~~~vLdiG~G~G~~~~~l~--------~~~-------~~ 57 (259)
T 2p35_A 8 AQQYLKFEDERTRPARDLLAQ--------V--P-----LERVLNGYDLGCGPGNSTELLT--------DRY-------GV 57 (259)
T ss_dssp CGGGBCCCCGGGHHHHHHHTT--------C--C-----CSCCSSEEEETCTTTHHHHHHH--------HHH-------CT
T ss_pred HHHHHHHHHHHHHHHHHHHHh--------c--C-----CCCCCEEEEecCcCCHHHHHHH--------HhC-------CC
Confidence 457888888887765432211 1 1 1335789999999999998874 332 34
Q ss_pred ceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecC
Q 018250 97 FQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTR 176 (359)
Q Consensus 97 ~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~ 176 (359)
.+++..|+...+....-+..+ +--|.. +++.+.. |++++|+|+|+.++||+.
T Consensus 58 ~~v~~~D~s~~~~~~a~~~~~-~~~~~~---~d~~~~~-~~~~fD~v~~~~~l~~~~----------------------- 109 (259)
T 2p35_A 58 NVITGIDSDDDMLEKAADRLP-NTNFGK---ADLATWK-PAQKADLLYANAVFQWVP----------------------- 109 (259)
T ss_dssp TSEEEEESCHHHHHHHHHHST-TSEEEE---CCTTTCC-CSSCEEEEEEESCGGGST-----------------------
T ss_pred CEEEEEECCHHHHHHHHHhCC-CcEEEE---CChhhcC-ccCCcCEEEEeCchhhCC-----------------------
Confidence 589999998766655544432 111222 3554444 789999999999999964
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccC
Q 018250 177 FMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTF 256 (359)
Q Consensus 177 ~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f 256 (359)
|...+|+.-++-|+|||+++++.++.... .... .+.++...+.......+..
T Consensus 110 ---------------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~---------~~~~----~~~~~~~~~~~~~~~~~~~ 161 (259)
T 2p35_A 110 ---------------DHLAVLSQLMDQLESGGVLAVQMPDNLQE---------PTHI----AMHETADGGPWKDAFSGGG 161 (259)
T ss_dssp ---------------THHHHHHHHGGGEEEEEEEEEEEECCTTS---------HHHH----HHHHHHHHSTTGGGC----
T ss_pred ---------------CHHHHHHHHHHhcCCCeEEEEEeCCCCCc---------HHHH----HHHHHhcCcchHHHhcccc
Confidence 23347778889999999999999754321 1111 2333332211111100111
Q ss_pred CccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCCCCChhHHHHHHHHHh-hhhhhhccCHHHHHHHHHHHHHHHHHH
Q 018250 257 NVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHKTFPAQFYLSHLRAVL-EGLIGKHFGEELLENIFNHINTKEAEI 335 (359)
Q Consensus 257 ~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~~~~~~~v~~~iRa~~-~~~l~~~~~e~i~delf~r~~~~~~~~ 335 (359)
..+..+++.+++.++++++| |+++..+... ...+ .+++.+..|+++.. .+++. .++++..+++.+++.+.+++.
T Consensus 162 ~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~-~~~~--~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (259)
T 2p35_A 162 LRRKPLPPPSDYFNALSPKS-SRVDVWHTVY-NHPM--KDADSIVEWVKGTGLRPYLA-AAGEENREAFLADYTRRIAAA 236 (259)
T ss_dssp ---CCCCCHHHHHHHHGGGE-EEEEEEEEEE-EEEE--SCHHHHHHHHTTTTTTHHHH-TTCGGGHHHHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHhcC-CceEEEEEEe-eecc--CCchHHhhhhhcCcchHHHH-hCCHHHHHHHHHHHHHHHHHh
Confidence 34567899999999999999 9876555432 2223 25678899998753 45554 588888999999999888865
Q ss_pred hh
Q 018250 336 LS 337 (359)
Q Consensus 336 ~~ 337 (359)
..
T Consensus 237 ~~ 238 (259)
T 2p35_A 237 YP 238 (259)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 7
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.45 E-value=4.8e-12 Score=114.53 Aligned_cols=169 Identities=13% Similarity=0.077 Sum_probs=118.6
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~ 135 (359)
....+|+|+|||+|..+..++ +. .|..+++..|+........-+..+... -+.-+.+++.+..+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~--------~~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~ 106 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLM--------EK-------YPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYDF 106 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHH--------HH-------CTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCCC
T ss_pred CCCCeEEEecCCCCHHHHHHH--------Hh-------CCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccCC
Confidence 346899999999999998874 33 245799999998766665555554311 12223356765556
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
+ +++|+|+++.++||++. .+...+|+.-++-|+|||++++...
T Consensus 107 ~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 107 E-EKYDMVVSALSIHHLED------------------------------------EDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp C-SCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-CCceEEEEeCccccCCH------------------------------------HHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 6 99999999999999642 1234577788899999999999987
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccC---CccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTF---NVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f---~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
..++. ..........|.....++-.+..++..+ ....+.++.+|+.++++++| |++.++...
T Consensus 150 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~~~~~ 214 (234)
T 3dtn_A 150 VHGET--------AFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVSCIYK 214 (234)
T ss_dssp CBCSS--------HHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEEEEEE
T ss_pred cCCCC--------hhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCceeeeee
Confidence 66542 1233455667777776666666655431 12345679999999999999 998877654
No 8
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.42 E-value=5.6e-12 Score=116.71 Aligned_cols=194 Identities=12% Similarity=0.101 Sum_probs=118.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..+..++ +.+ ..+++..|+........-+..... .--+..+.+++.+..
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~--------~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 124 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLA--------TAR--------DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP 124 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHS--------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CCCEEEEeCCCCCHHHHHHH--------Hhc--------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC
Confidence 35799999999999998875 221 258888888765544333222110 000222235776666
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+|++++|+|+|+.++||+.+ ...+|+..++-|+|||++++..
T Consensus 125 ~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 125 FEDASFDAVWALESLHHMPD--------------------------------------RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp SCTTCEEEEEEESCTTTSSC--------------------------------------HHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCCccEEEEechhhhCCC--------------------------------------HHHHHHHHHHHcCCCeEEEEEE
Confidence 88999999999999999643 2247778889999999999998
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCCC
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHKT 294 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~~ 294 (359)
+...+... ......+..+.. .+. ..++++.+++.++++++| |++..++.+......
T Consensus 167 ~~~~~~~~----------~~~~~~~~~~~~----------~~~-~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~-- 222 (273)
T 3bus_A 167 FVLLAPVE----------GAKKEAVDAFRA----------GGG-VLSLGGIDEYESDVRQAE-LVVTSTVDISAQARP-- 222 (273)
T ss_dssp EEESSCCC----------HHHHHHHHHHHH----------HHT-CCCCCCHHHHHHHHHHTT-CEEEEEEECHHHHTT--
T ss_pred eeccCCCC----------hhHHHHHHHHHh----------hcC-ccCCCCHHHHHHHHHHcC-CeEEEEEECcHhHHH--
Confidence 86654211 011111111110 011 226789999999999999 999888876322100
Q ss_pred CChhHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHH
Q 018250 295 FPAQFYLSHLRAVLEGLIGKHFGEELLENIFNHINT 330 (359)
Q Consensus 295 ~~~~~v~~~iRa~~~~~l~~~~~e~i~delf~r~~~ 330 (359)
.-..+...+++....+ ...+|++..+.+.+.++.
T Consensus 223 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 256 (273)
T 3bus_A 223 -SLVKTAEAFENARSQV-EPFMGAEGLDRMIATFRG 256 (273)
T ss_dssp -HHHHHHHHHHHTHHHH-HHHHCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhHHHH-HhhcCHHHHHHHHHHHHH
Confidence 0122222233222232 335677776666666654
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.36 E-value=3.2e-11 Score=110.58 Aligned_cols=194 Identities=14% Similarity=0.098 Sum_probs=122.9
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~ 135 (359)
....+|+|+|||+|..+..++ +.+ ..+++..|+........-+..... --+.-+.+++.+..+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~--------~~~--------~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~ 116 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYIN--------EKY--------GAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEF 116 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------HHH--------CCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCC
T ss_pred CCCCEEEEECCCCCHHHHHHH--------HHc--------CCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCC
Confidence 345799999999999998885 322 248899998876555444443321 111222346666668
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|++++|+|+|+.++||++. .|...+|+.-++-|+|||++++..+
T Consensus 117 ~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 117 PENNFDLIYSRDAILALSL------------------------------------ENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp CTTCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcEEEEeHHHHHHhcCh------------------------------------HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8999999999999999631 2566788888999999999999988
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCCCC
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHKTF 295 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~~~ 295 (359)
..+..... ...+...+.. .| ..+++.+++..+++++| |++...+.+... +
T Consensus 161 ~~~~~~~~--------~~~~~~~~~~---~~-------------~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~--~--- 210 (266)
T 3ujc_A 161 CATEKENW--------DDEFKEYVKQ---RK-------------YTLITVEEYADILTACN-FKNVVSKDLSDY--W--- 210 (266)
T ss_dssp EESCGGGC--------CHHHHHHHHH---HT-------------CCCCCHHHHHHHHHHTT-CEEEEEEECHHH--H---
T ss_pred ccCCcccc--------hHHHHHHHhc---CC-------------CCCCCHHHHHHHHHHcC-CeEEEEEeCCHH--H---
Confidence 66542111 0111111111 11 25789999999999999 999887765321 1
Q ss_pred ChhHHHHHHHHHhh--hhhhhccCHHHHHHHHHHHHHHHH
Q 018250 296 PAQFYLSHLRAVLE--GLIGKHFGEELLENIFNHINTKEA 333 (359)
Q Consensus 296 ~~~~v~~~iRa~~~--~~l~~~~~e~i~delf~r~~~~~~ 333 (359)
...+..|.+.+.. .-+...++++..+.+.+.....+.
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (266)
T 3ujc_A 211 -NQLLEVEHKYLHENKEEFLKLFSEKKFISLDDGWSRKIK 249 (266)
T ss_dssp -HHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhCHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 2233444444322 112234666666666555555444
No 10
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.35 E-value=2.2e-11 Score=112.75 Aligned_cols=211 Identities=19% Similarity=0.152 Sum_probs=125.2
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGR 133 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~ 133 (359)
....+|+|+|||+|..+..++ + .+..+++..|+........-+...... --+.-+.+++.+.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la--------~--------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 108 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLA--------G--------HVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL 108 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHH--------T--------TCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred CCCCEEEEeCCCCCHHHHHHH--------h--------ccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC
Confidence 346899999999999998874 1 234689999998765554433321100 0011223466555
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.+|++++|+|+|+.++|++ . +..+|+.-.+-|+|||++++.
T Consensus 109 ~~~~~~fD~i~~~~~~~~~-~--------------------------------------~~~~l~~~~~~LkpgG~l~~~ 149 (267)
T 3kkz_A 109 PFRNEELDLIWSEGAIYNI-G--------------------------------------FERGLNEWRKYLKKGGYLAVS 149 (267)
T ss_dssp CCCTTCEEEEEESSCGGGT-C--------------------------------------HHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCCCCEEEEEEcCCceec-C--------------------------------------HHHHHHHHHHHcCCCCEEEEE
Confidence 5789999999999999996 2 123677788999999999999
Q ss_pred eccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCC
Q 018250 214 LITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHK 293 (359)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~ 293 (359)
.+........ ..+...|.+- .| .+++.+++.+.++++| |++..++.+....+.
T Consensus 150 ~~~~~~~~~~---------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~~v~~~~~~~~~w~- 202 (267)
T 3kkz_A 150 ECSWFTDERP---------AEINDFWMDA---------------YP-EIDTIPNQVAKIHKAG-YLPVATFILPENCWT- 202 (267)
T ss_dssp EEEESSSCCC---------HHHHHHHHHH---------------CT-TCEEHHHHHHHHHHTT-EEEEEEEECCGGGTT-
T ss_pred EeeecCCCCh---------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CEEEEEEECCHhHHH-
Confidence 8754322110 2233334321 12 5679999999999999 999888776432221
Q ss_pred CCChhHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHHHHHHHhhhhhcCCcceEEEEEEEEec
Q 018250 294 TFPAQFYLSHLRAVLEGLIGKHFGEELLENIFNHINTKEAEILSIHNGKLHKEIEVFVVLKRI 356 (359)
Q Consensus 294 ~~~~~~v~~~iRa~~~~~l~~~~~e~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~l~r~ 356 (359)
..+...+..+...+...+-....+.++.++..+.++ .... ....+.-.+.+++|.
T Consensus 203 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---y~~~~~~~f~~~~~~ 257 (267)
T 3kkz_A 203 ----DHYFTPKVAAQKIFLTKYAGNKIAEEFSMLQSIEEE-LYHK---YKEYYGYTFFIAKKI 257 (267)
T ss_dssp ----TTTHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH-HHHH---HTTTEEEEEEEEEEC
T ss_pred ----HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHH---hccccCeEeehhhHH
Confidence 122222333333333332233444555554443332 1121 113455566667664
No 11
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.33 E-value=5.9e-11 Score=111.39 Aligned_cols=151 Identities=16% Similarity=0.057 Sum_probs=101.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC--CcccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP--RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~--~~~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..+..++ +.+ ..+++..|+........-+.... -.--+..+.+++.+..
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~--------~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLV--------RKF--------GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH--------CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHh--------CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 45799999999999998874 222 14888999876554433322211 0001122235776767
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+|++++|+|+|+.++||+.+ ...+|+.-++-|+|||++++..
T Consensus 146 ~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 146 CEDNSYDFIWSQDAFLHSPD--------------------------------------KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp SCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEeEEEecchhhhcCC--------------------------------------HHHHHHHHHHHcCCCeEEEEEE
Confidence 89999999999999999653 2246777889999999999998
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
+...+.... ..+...+... ..| .+++.+++.++++++| |++..++..
T Consensus 188 ~~~~~~~~~---------~~~~~~~~~~--------------~~~-~~~~~~~~~~~l~~aG-f~~~~~~~~ 234 (297)
T 2o57_A 188 PMKEDGIDK---------SSIQPILDRI--------------KLH-DMGSLGLYRSLAKECG-LVTLRTFSR 234 (297)
T ss_dssp EEECTTCCG---------GGGHHHHHHH--------------TCS-SCCCHHHHHHHHHHTT-EEEEEEEEC
T ss_pred eccCCCCch---------HHHHHHHHHh--------------cCC-CCCCHHHHHHHHHHCC-CeEEEEEEC
Confidence 766543211 0111111211 112 3679999999999999 999888765
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.32 E-value=2.3e-11 Score=111.44 Aligned_cols=210 Identities=17% Similarity=0.138 Sum_probs=123.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..+..++ +.+ + .+++..|+........-+...... --+.-+.+++....
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~--------~~~-------~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 109 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLA--------DYV-------K-GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP 109 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHC-------C-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HhC-------C-CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 35699999999999998884 332 2 288999987655544333321100 00122234665556
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+|++++|+|+|+.++||+. + ..+|+.-.+-|+|||++++..
T Consensus 110 ~~~~~fD~v~~~~~l~~~~--~-------------------------------------~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 110 FQNEELDLIWSEGAIYNIG--F-------------------------------------ERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SCTTCEEEEEEESCSCCCC--H-------------------------------------HHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCCEEEEEecChHhhcC--H-------------------------------------HHHHHHHHHHcCCCcEEEEEE
Confidence 8899999999999999961 1 136777789999999999998
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCCC
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHKT 294 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~~ 294 (359)
+........ ..+...|... .| .+++.+++.+.++++| |++..........+..
T Consensus 151 ~~~~~~~~~---------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~~v~~~~~~~~~w~~- 203 (257)
T 3f4k_A 151 ASWFTSERP---------AEIEDFWMDA---------------YP-EISVIPTCIDKMERAG-YTPTAHFILPENCWTE- 203 (257)
T ss_dssp EEESSSCCC---------HHHHHHHHHH---------------CT-TCCBHHHHHHHHHHTT-EEEEEEEECCGGGTCC-
T ss_pred eeccCCCCh---------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CeEEEEEECChhhHHH-
Confidence 653321110 2233334431 01 2679999999999999 9998876664322211
Q ss_pred CChhHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHHHHHHHhhhhhcCCcceEEEEEEEEec
Q 018250 295 FPAQFYLSHLRAVLEGLIGKHFGEELLENIFNHINTKEAEILSIHNGKLHKEIEVFVVLKRI 356 (359)
Q Consensus 295 ~~~~~v~~~iRa~~~~~l~~~~~e~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~~~l~r~ 356 (359)
.+...++...+.+...+-+....+++.++..+....+ ..+ ...+--.+++++|+
T Consensus 204 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 204 ----HYFAPQDEVRETFMKEHAGNKTAMDFMKGQQYERSLY-SKY---KDYYGYVFYIGQKR 257 (257)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HHH---TTTEEEEEEEEEEC
T ss_pred ----HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHh---CCccceEEEEEecC
Confidence 1111222222233333334455666666665544433 221 12344456666663
No 13
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.31 E-value=9.5e-12 Score=114.61 Aligned_cols=153 Identities=14% Similarity=0.132 Sum_probs=100.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~ 133 (359)
...+|+|+|||+|..+..+. +. . .+++..|+...+....-+.... .. +.-+.+++...
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~--------~~-------~--~~v~gvD~s~~~l~~a~~~~~~~~~~~--v~~~~~d~~~l 97 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFA--------PF-------V--KKVVAFDLTEDILKVARAFIEGNGHQQ--VEYVQGDAEQM 97 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHG--------GG-------S--SEEEEEESCHHHHHHHHHHHHHTTCCS--EEEEECCC-CC
T ss_pred CCCEEEEEeCCCCHHHHHHH--------Hh-------C--CEEEEEeCCHHHHHHHHHHHHhcCCCc--eEEEEecHHhC
Confidence 45799999999999888773 22 1 2889999877555443332211 11 11223466666
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.||++++|+|+|+.++||+.+ ...+|+.-++-|+|||++++.
T Consensus 98 ~~~~~~fD~V~~~~~l~~~~d--------------------------------------~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 98 PFTDERFHIVTCRIAAHHFPN--------------------------------------PASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp CSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCEEEEEEhhhhHhcCC--------------------------------------HHHHHHHHHHHcCCCCEEEEE
Confidence 689999999999999999743 224677788999999999998
Q ss_pred eccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeec
Q 018250 214 LITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQ 288 (359)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~ 288 (359)
....++. ..+..+...+..+. + .....+.+.+++.++++++| |++..++.+..
T Consensus 140 ~~~~~~~---------~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~ 192 (260)
T 1vl5_A 140 DNSAPEN---------DAFDVFYNYVEKER----------D--YSHHRAWKKSDWLKMLEEAG-FELEELHCFHK 192 (260)
T ss_dssp EEEBCSS---------HHHHHHHHHHHHHH----------C--TTCCCCCBHHHHHHHHHHHT-CEEEEEEEEEE
T ss_pred EcCCCCC---------HHHHHHHHHHHHhc----------C--ccccCCCCHHHHHHHHHHCC-CeEEEEEEeec
Confidence 7654432 11222222222211 0 11234578999999999999 99988888754
No 14
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.29 E-value=3e-11 Score=108.05 Aligned_cols=157 Identities=15% Similarity=0.153 Sum_probs=105.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+++ . ..+++..|+........-+..+.+--|. .+++.+..++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~---~~d~~~~~~~ 104 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLL--------A---------GRTVYGIEPSREMRMIAKEKLPKEFSIT---EGDFLSFEVP 104 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHH--------T---------TCEEEEECSCHHHHHHHHHHSCTTCCEE---SCCSSSCCCC
T ss_pred CCCeEEEeCCCCCHHHHHHHh--------C---------CCeEEEEeCCHHHHHHHHHhCCCceEEE---eCChhhcCCC
Confidence 357999999999999888742 1 2489999998766555544443111122 3466665667
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
+++|+|+|+.++||+... +...+|+.-++-|+|||+++++.+.
T Consensus 105 -~~fD~v~~~~~l~~~~~~------------------------------------~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 105 -TSIDTIVSTYAFHHLTDD------------------------------------EKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp -SCCSEEEEESCGGGSCHH------------------------------------HHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred -CCeEEEEECcchhcCChH------------------------------------HHHHHHHHHHHhcCCCCEEEEEecc
Confidence 999999999999996421 1234777888999999999999765
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
..+. ......+..+...|.... ..-..+.++++.++++++++++| |++...+..
T Consensus 148 ~~~~------------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 201 (220)
T 3hnr_A 148 FADQ------------DAYDKTVEAAKQRGFHQL---ANDLQTEYYTRIPVMQTIFENNG-FHVTFTRLN 201 (220)
T ss_dssp BSSH------------HHHHHHHHHHHHTTCHHH---HHHHHHSCCCBHHHHHHHHHHTT-EEEEEEECS
T ss_pred ccCh------------HHHHHHHHHHHhCCCccc---hhhcchhhcCCHHHHHHHHHHCC-CEEEEeecc
Confidence 5431 122233334444443211 11123457889999999999999 998877654
No 15
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=1.2e-11 Score=114.53 Aligned_cols=191 Identities=15% Similarity=0.135 Sum_probs=118.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+. .+..+|+..|+....... . ....-+.-+.+++....+|
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~-----------------~~~~~v~gvD~s~~~~~~----a-~~~~~~~~~~~d~~~~~~~ 91 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALA-----------------NQGLFVYAVEPSIVMRQQ----A-VVHPQVEWFTGYAENLALP 91 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHH-----------------TTTCEEEEECSCHHHHHS----S-CCCTTEEEECCCTTSCCSC
T ss_pred CCCEEEEEcCcccHHHHHHH-----------------hCCCEEEEEeCCHHHHHH----H-HhccCCEEEECchhhCCCC
Confidence 46899999999999998874 134689999987633211 1 1111122223466665688
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+|+.++||+. |+..+|+.-++-|+ ||++++..+.
T Consensus 92 ~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 92 DKSVDGVISILAIHHFS--------------------------------------HLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp TTCBSEEEEESCGGGCS--------------------------------------SHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred CCCEeEEEEcchHhhcc--------------------------------------CHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 99999999999999963 34457788889999 9988888876
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecCCCCCC--
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQPMRHKT-- 294 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~~~-- 294 (359)
.+.... .... ..+...... ...++++.+++. .++++| |++.+++.+..|..+.+
T Consensus 133 ~~~~~~---~~~~---~~~~~~~~~----------------~~~~~~~~~~~~-~l~~aG-F~~v~~~~~~~p~~~~~~~ 188 (261)
T 3ege_A 133 IRLAQR---IWLY---DYFPFLWED----------------ALRFLPLDEQIN-LLQENT-KRRVEAIPFLLPHDLSDLF 188 (261)
T ss_dssp GGGCCC---CGGG---GTCHHHHHH----------------HHTSCCHHHHHH-HHHHHH-CSEEEEEECCEETTCSBCC
T ss_pred CchhHH---HHHH---HHHHHHhhh----------------hhhhCCCHHHHH-HHHHcC-CCceeEEEecCCCcCcchh
Confidence 543211 1100 111111110 012678899999 999999 99988888765544321
Q ss_pred C-----ChhHHHHH-HHHHhhhhhhhccCHHHHHHHHHHHHHHHHH
Q 018250 295 F-----PAQFYLSH-LRAVLEGLIGKHFGEELLENIFNHINTKEAE 334 (359)
Q Consensus 295 ~-----~~~~v~~~-iRa~~~~~l~~~~~e~i~delf~r~~~~~~~ 334 (359)
. .+..+... .+...+. +. .++++.++.+.++..+.++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~e~~~~~~~~~~~l~~ 232 (261)
T 3ege_A 189 AAAAWRRPELYLKAEVRAGISS-FA-LANQDLVEKGLELLTADLNN 232 (261)
T ss_dssp TTTTTTCGGGGGSHHHHHTSHH-HH-HSCHHHHHHHHHHHHHHHHT
T ss_pred hHHhccCchhhcCcchhccccc-ee-ecCHHHHHHHHHHHHHHHhc
Confidence 0 11222221 2222222 22 35778888888888877754
No 16
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.28 E-value=2.4e-11 Score=113.55 Aligned_cols=162 Identities=18% Similarity=0.214 Sum_probs=102.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Cc-ccccccCcccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RK-YYAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~-~~~~~vpgsfy 131 (359)
...+|+|+|||+|..|+.++ +++ ..|..+|+..|+...+....-+.+.. .+ -|+. |++.
T Consensus 70 ~~~~vLDlGcGtG~~~~~la--------~~~-----~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~---~D~~ 133 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVR--------RNI-----HHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIE---GDIR 133 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHH--------HTC-----CSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE---SCTT
T ss_pred CCCEEEEEeCCCCHHHHHHH--------Hhc-----CCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEee---cccc
Confidence 35799999999999998874 332 23567999999988776554444322 12 1333 3554
Q ss_pred cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 132 GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 132 ~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
+ +|.+++|+++|+++|||+.. .|...+|+.-++-|+|||+|+
T Consensus 134 ~--~~~~~~d~v~~~~~l~~~~~------------------------------------~~~~~~l~~i~~~LkpGG~li 175 (261)
T 4gek_A 134 D--IAIENASMVVLNFTLQFLEP------------------------------------SERQALLDKIYQGLNPGGALV 175 (261)
T ss_dssp T--CCCCSEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred c--ccccccccceeeeeeeecCc------------------------------------hhHhHHHHHHHHHcCCCcEEE
Confidence 4 34567999999999999641 144567888899999999999
Q ss_pred EEeccCCCCCCCCCcchhHHHHHHHHHHHHHH-HcCCCChhhh----ccCCccccCCCHHHHHHHHHhCCceeEeE
Q 018250 212 FSLITGPSGIPFADTVQGATYNFLGSCLWDLA-KMGVISEEKA----RTFNVPAYFPYVEELESLIQRNGHFAMER 282 (359)
Q Consensus 212 l~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv-~eGli~~e~~----d~f~~P~y~ps~~E~~~~i~~~G~F~i~~ 282 (359)
++-...... ....+.+...+.+.. ..|. ++.++ ..........|.+|+.+.++++| |+...
T Consensus 176 i~e~~~~~~--------~~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~~ve 241 (261)
T 4gek_A 176 LSEKFSFED--------AKVGELLFNMHHDFKRANGY-SELEISQKRSMLENVMLTDSVETHKARLHKAG-FEHSE 241 (261)
T ss_dssp EEEEBCCSS--------HHHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CSEEE
T ss_pred EEeccCCCC--------HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CCeEE
Confidence 976544331 112233333333332 2233 22111 11112234468999999999999 97543
No 17
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.27 E-value=3.3e-11 Score=110.00 Aligned_cols=154 Identities=15% Similarity=0.147 Sum_probs=100.7
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCccccc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHG 132 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~ 132 (359)
....+|+|+|||+|..+..++ +. . .+++..|+........-+.... .. +.-+.+++..
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~--------~~-------~--~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~~d~~~ 80 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFS--------PY-------V--QECIGVDATKEMVEVASSFAQEKGVEN--VRFQQGTAES 80 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHG--------GG-------S--SEEEEEESCHHHHHHHHHHHHHHTCCS--EEEEECBTTB
T ss_pred CCCCEEEEEccCcCHHHHHHH--------Hh-------C--CEEEEEECCHHHHHHHHHHHHHcCCCC--eEEEeccccc
Confidence 346799999999999888773 21 1 2788889876555443332211 11 1112346656
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
..++++++|+|+|+.++||+.+ ...+|+.-++-|+|||++++
T Consensus 81 ~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 81 LPFPDDSFDIITCRYAAHHFSD--------------------------------------VRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp CCSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCcEEEEEECCchhhccC--------------------------------------HHHHHHHHHHHcCCCcEEEE
Confidence 5688999999999999999643 23467778899999999999
Q ss_pred EeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeec
Q 018250 213 SLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQ 288 (359)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~ 288 (359)
.....++. .....+...+..+ ..+ ......+.+++.++++++| |++..++.+..
T Consensus 123 ~~~~~~~~---------~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~ll~~aG-f~~~~~~~~~~ 176 (239)
T 1xxl_A 123 VDHYAPED---------PVLDEFVNHLNRL-RDP-----------SHVRESSLSEWQAMFSANQ-LAYQDIQKWNL 176 (239)
T ss_dssp EEECBCSS---------HHHHHHHHHHHHH-HCT-----------TCCCCCBHHHHHHHHHHTT-EEEEEEEEEEE
T ss_pred EEcCCCCC---------hhHHHHHHHHHHh-ccc-----------cccCCCCHHHHHHHHHHCC-CcEEEEEeecC
Confidence 87654431 1122222222221 111 1124568999999999999 99988888753
No 18
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.27 E-value=1.9e-11 Score=109.85 Aligned_cols=172 Identities=13% Similarity=0.033 Sum_probs=111.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc------cccccCccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY------YAAGVPGSF 130 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~------~~~~vpgsf 130 (359)
...+|+|+|||+|..+..++ +. ..+++..|+........-+....... -+.-+.+++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~ 92 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELA--------SK---------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENA 92 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCT
T ss_pred CCCeEEEECCCCCHHHHHHH--------hC---------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecc
Confidence 45799999999999988874 21 24899999987666655554443111 122223456
Q ss_pred ccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 131 HGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 131 y~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
....+|++++|+++++.++|++... .++..+|+.-.+-|+|||++
T Consensus 93 ~~~~~~~~~~D~v~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG~l 137 (235)
T 3sm3_A 93 SSLSFHDSSFDFAVMQAFLTSVPDP-----------------------------------KERSRIIKEVFRVLKPGAYL 137 (235)
T ss_dssp TSCCSCTTCEEEEEEESCGGGCCCH-----------------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred cccCCCCCceeEEEEcchhhcCCCH-----------------------------------HHHHHHHHHHHHHcCCCeEE
Confidence 5556889999999999999996531 13345788888999999999
Q ss_pred EEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhcc--CCccccCCCHHHHHHHHHhCCceeEeEEEEeec
Q 018250 211 VFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKART--FNVPAYFPYVEELESLIQRNGHFAMERMQQLDQ 288 (359)
Q Consensus 211 vl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~--f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~ 288 (359)
+++.++.....+ .........+.....+|......... .....++++.+|++++++++| |++..++....
T Consensus 138 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f~~~~~~~~~~ 209 (235)
T 3sm3_A 138 YLVEFGQNWHLK-------LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-FEIDYFRVKEL 209 (235)
T ss_dssp EEEEEBCCTTSH-------HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-EEEEEEEEEEE
T ss_pred EEEECCcchhHH-------HHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-CEEEEEEecce
Confidence 999987754211 11122222222222222111110011 123356889999999999999 99999987643
No 19
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.27 E-value=4e-10 Score=106.30 Aligned_cols=166 Identities=13% Similarity=0.183 Sum_probs=103.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Cc-ccccccCcccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RK-YYAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~-~~~~~vpgsfy 131 (359)
...+|+|+|||+|..+..++ +.+ + .+|+..|+........-+.... .. .+.. +++.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la--------~~~-------~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~ 132 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAV--------AEY-------D-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGWE 132 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH-------C-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE---CCGG
T ss_pred CcCEEEEeeccCcHHHHHHH--------HhC-------C-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE---CCHH
Confidence 35799999999999998885 332 1 5889999977665444333221 11 1222 3443
Q ss_pred cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 132 GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 132 ~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
+ + ++++|+|+|+.++|++.+... .. ..+++..+|+.-.+-|+|||+++
T Consensus 133 ~-~--~~~fD~v~~~~~~~~~~d~~~-~~----------------------------~~~~~~~~l~~~~~~LkpgG~l~ 180 (302)
T 3hem_A 133 E-F--DEPVDRIVSLGAFEHFADGAG-DA----------------------------GFERYDTFFKKFYNLTPDDGRML 180 (302)
T ss_dssp G-C--CCCCSEEEEESCGGGTTCCSS-CC----------------------------CTTHHHHHHHHHHHSSCTTCEEE
T ss_pred H-c--CCCccEEEEcchHHhcCcccc-cc----------------------------chhHHHHHHHHHHHhcCCCcEEE
Confidence 3 2 789999999999999765311 00 01366778999999999999999
Q ss_pred EEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccc-cCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 212 FSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPA-YFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 212 l~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~-y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
+..+...+.............+ ...+.+.. ..+..|. +.|+.+++.+.+++.| |++..++.+
T Consensus 181 i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----------~~~~~p~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 243 (302)
T 3hem_A 181 LHTITIPDKEEAQELGLTSPMS--LLRFIKFI----------LTEIFPGGRLPRISQVDYYSSNAG-WKVERYHRI 243 (302)
T ss_dssp EEEEECCCHHHHHHHTCCCCHH--HHHHHHHH----------HHHTCTTCCCCCHHHHHHHHHHHT-CEEEEEEEC
T ss_pred EEEEeccCccchhhcccccccc--ccchHHHH----------HHhcCCCCCCCCHHHHHHHHHhCC-cEEEEEEeC
Confidence 9998766421000000000000 00011111 1122333 7899999999999999 999988776
No 20
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.26 E-value=2.5e-11 Score=114.28 Aligned_cols=157 Identities=8% Similarity=0.136 Sum_probs=97.4
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCce--EEecCCCCCchHHHHHhCCC----Ccc-cccccCc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQ--VFFNDHTENDFNTLFRTLPP----RKY-YAAGVPG 128 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~--v~~nDLp~NDFn~lf~~l~~----~~~-~~~~vpg 128 (359)
....+|||+|||+|..|..++..+ ..++ |... ++..|...++....-+.+.. ... +.. ..+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l----~~~~-------~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~-~~~ 118 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKV----QAQY-------PGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAW-HKE 118 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHH----HHHS-------TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEE-ECS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHH----HhhC-------CCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEE-Eec
Confidence 346799999999998777665433 2232 3344 49999988776654443211 111 110 111
Q ss_pred cccc------CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 018250 129 SFHG------RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAE 202 (359)
Q Consensus 129 sfy~------~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 202 (359)
+... +.|+++++|+|+|+.+|||+.+ +..+|+.-++
T Consensus 119 ~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d--------------------------------------~~~~l~~~~r 160 (292)
T 2aot_A 119 TSSEYQSRMLEKKELQKWDFIHMIQMLYYVKD--------------------------------------IPATLKFFHS 160 (292)
T ss_dssp CHHHHHHHHHTTTCCCCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHH
T ss_pred chhhhhhhhccccCCCceeEEEEeeeeeecCC--------------------------------------HHHHHHHHHH
Confidence 2221 2267899999999999999653 3346777889
Q ss_pred hhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeE
Q 018250 203 ELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMER 282 (359)
Q Consensus 203 EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~ 282 (359)
-|||||++++.....+. .+. ..|...... +. ......+++.+++..++++.| |++..
T Consensus 161 ~LkpgG~l~i~~~~~~~-----------~~~---~~~~~~~~~--~~------~~~~~~~~~~~~~~~~l~~aG-f~~~~ 217 (292)
T 2aot_A 161 LLGTNAKMLIIVVSGSS-----------GWD---KLWKKYGSR--FP------QDDLCQYITSDDLTQMLDNLG-LKYEC 217 (292)
T ss_dssp TEEEEEEEEEEEECTTS-----------HHH---HHHHHHGGG--SC------CCTTCCCCCHHHHHHHHHHHT-CCEEE
T ss_pred HcCCCcEEEEEEecCCc-----------cHH---HHHHHHHHh--cc------CCCcccCCCHHHHHHHHHHCC-CceEE
Confidence 99999999999765321 111 122222110 00 001236789999999999999 98876
Q ss_pred EEE
Q 018250 283 MQQ 285 (359)
Q Consensus 283 le~ 285 (359)
...
T Consensus 218 ~~~ 220 (292)
T 2aot_A 218 YDL 220 (292)
T ss_dssp EEE
T ss_pred EEe
Confidence 433
No 21
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.25 E-value=5.2e-11 Score=108.44 Aligned_cols=143 Identities=15% Similarity=0.085 Sum_probs=99.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccC--C
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGR--L 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~--l 134 (359)
...+|+|+|||+|..+..+. +. ..+++..|+........-+. +..+.++..+- .
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~~~ 96 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCK--------EE---------GIESIGVDINEDMIKFCEGK-------FNVVKSDAIEYLKS 96 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHH--------HH---------TCCEEEECSCHHHHHHHHTT-------SEEECSCHHHHHHT
T ss_pred CCCeEEEEeCCCCHHHHHHH--------hC---------CCcEEEEECCHHHHHHHHhh-------cceeeccHHHHhhh
Confidence 45799999999999987663 22 13688899876444332221 12222344442 5
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+|++++|+|+|+.++||+.. .|+..+|+.-++-|+|||++++..
T Consensus 97 ~~~~~fD~i~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 97 LPDKYLDGVMISHFVEHLDP------------------------------------ERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp SCTTCBSEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred cCCCCeeEEEECCchhhCCc------------------------------------HHHHHHHHHHHHHcCCCcEEEEEe
Confidence 78999999999999999642 155668888899999999999998
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
++..+ ... +.+.+ + .....++++.+++..+++++| |++..++.+.
T Consensus 141 ~~~~~-----------~~~-~~~~~--------~-------~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~ 185 (240)
T 3dli_A 141 PNPTS-----------LYS-LINFY--------I-------DPTHKKPVHPETLKFILEYLG-FRDVKIEFFE 185 (240)
T ss_dssp ECTTS-----------HHH-HHHHT--------T-------STTCCSCCCHHHHHHHHHHHT-CEEEEEEEEC
T ss_pred CCcch-----------hHH-HHHHh--------c-------CccccccCCHHHHHHHHHHCC-CeEEEEEEec
Confidence 86443 111 11111 1 111236678999999999999 9999888875
No 22
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.25 E-value=3e-11 Score=106.86 Aligned_cols=143 Identities=16% Similarity=0.103 Sum_probs=104.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPK 137 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~ 137 (359)
..+|+|+|||+|..+..++ +. ..+++..|+........-+..+. --|+ .+++.+..+|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~~~~~a~~~~~~-~~~~---~~d~~~~~~~~ 100 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLA--------SL---------GHQIEGLEPATRLVELARQTHPS-VTFH---HGTITDLSDSP 100 (203)
T ss_dssp CSCEEEETCTTCHHHHHHH--------HT---------TCCEEEECCCHHHHHHHHHHCTT-SEEE---CCCGGGGGGSC
T ss_pred CCeEEEecCCCCHHHHHHH--------hc---------CCeEEEEeCCHHHHHHHHHhCCC-CeEE---eCcccccccCC
Confidence 5789999999999988774 21 24789999876555444443331 1122 34665655789
Q ss_pred CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccC
Q 018250 138 STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITG 217 (359)
Q Consensus 138 ~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~ 217 (359)
+++|+|+++.++||++. .|...+|+.-++-|+|||+++++.+..
T Consensus 101 ~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 101 KRWAGLLAWYSLIHMGP------------------------------------GELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp CCEEEEEEESSSTTCCT------------------------------------TTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred CCeEEEEehhhHhcCCH------------------------------------HHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 99999999999999641 145568888899999999999999765
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeec
Q 018250 218 PSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQ 288 (359)
Q Consensus 218 ~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~ 288 (359)
.... .++....+.++.+.+|+.+++++.| |++..++.+..
T Consensus 145 ~~~~------------------------------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 184 (203)
T 3h2b_A 145 PSLE------------------------------PMYHPVATAYRWPLPELAQALETAG-FQVTSSHWDPR 184 (203)
T ss_dssp SSCE------------------------------EECCSSSCEEECCHHHHHHHHHHTT-EEEEEEEECTT
T ss_pred Cchh------------------------------hhhchhhhhccCCHHHHHHHHHHCC-CcEEEEEecCC
Confidence 5411 1122234567889999999999999 99999988743
No 23
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.25 E-value=1.3e-10 Score=107.84 Aligned_cols=160 Identities=17% Similarity=0.198 Sum_probs=101.7
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCccccc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHG 132 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~ 132 (359)
+...+|+|+|||+|..+..+. +. .|..+++..|+........-+.+.. .. +.-+.+++..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~--------~~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--~~~~~~d~~~ 98 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILA--------KN-------NPDAEITSIDISPESLEKARENTEKNGIKN--VKFLQANIFS 98 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHH--------HH-------CTTSEEEEEESCHHHHHHHHHHHHHTTCCS--EEEEECCGGG
T ss_pred CCCCeEEEecCCCCHHHHHHH--------Hh-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCC--cEEEEccccc
Confidence 346799999999999988774 33 2456899999977655544333211 11 1112246666
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
..+|++++|+|+++.++||+.+. ..+|+.-.+-|+|||++++
T Consensus 99 ~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 99 LPFEDSSFDHIFVCFVLEHLQSP--------------------------------------EEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp CCSCTTCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCeeEEEEechhhhcCCH--------------------------------------HHHHHHHHHHcCCCcEEEE
Confidence 67899999999999999997532 2467777899999999999
Q ss_pred EeccCCCCCCCCCcchhHHHHHHHHHHHHH-HHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 213 SLITGPSGIPFADTVQGATYNFLGSCLWDL-AKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~~~~l~~al~~l-v~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
.....++....... ....... ..+..+ ...|. ...+.+++..+++++| |++..++...
T Consensus 141 ~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~l~~~l~~aG-f~~v~~~~~~ 199 (276)
T 3mgg_A 141 IEGDHGSCYFHPEG--KKAIEAW-NCLIRVQAYMKG-------------NSLVGRQIYPLLQESG-FEKIRVEPRM 199 (276)
T ss_dssp EEECGGGCEEESCC--HHHHHHH-HHHHHHHHHTTC-------------CTTGGGGHHHHHHHTT-CEEEEEEEEE
T ss_pred EEcCCCCceECCCc--HHHHHHH-HHHHHHHHhcCC-------------CcchHHHHHHHHHHCC-CCeEEEeeEE
Confidence 87654331100000 1111111 121221 11111 2245688999999999 9998888764
No 24
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.24 E-value=5.3e-11 Score=111.17 Aligned_cols=165 Identities=12% Similarity=0.150 Sum_probs=106.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..+..++ +. ..+++..|+........-+.+.... --+.-+.+++.+..
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 130 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMA--------ER---------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA 130 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHH--------HT---------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG
T ss_pred CCCEEEEeCCcchHHHHHHH--------HC---------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh
Confidence 36799999999999988774 21 2488999987766554444332210 01112234665555
Q ss_pred -CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 135 -FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 135 -~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
++++++|+|+++.++||+.+ ...+|+.-++-|+|||++++.
T Consensus 131 ~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 131 SHLETPVDLILFHAVLEWVAD--------------------------------------PRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp GGCSSCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHTEEEEEEEEEE
T ss_pred hhcCCCceEEEECchhhcccC--------------------------------------HHHHHHHHHHHcCCCeEEEEE
Confidence 78899999999999999642 234777888999999999999
Q ss_pred eccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecC
Q 018250 214 LITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQP 289 (359)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~ 289 (359)
....... .....+...|.. ...+..... .....+.++.+.+|+..+++++| |++...+.+...
T Consensus 173 ~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG-f~v~~~~~~~~~ 235 (285)
T 4htf_A 173 FYNAHGL---------LMHNMVAGNFDY-VQAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG-WQIMGKTGVRVF 235 (285)
T ss_dssp EEBHHHH---------HHHHHHTTCHHH-HHTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEEEEEESSS
T ss_pred EeCCchH---------HHHHHHhcCHHH-Hhhhccccc--cccCCCCCCCCHHHHHHHHHHCC-CceeeeeeEEEe
Confidence 8765421 011111111222 222221111 11234567789999999999999 999998888543
No 25
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.23 E-value=3.8e-11 Score=112.03 Aligned_cols=101 Identities=19% Similarity=0.215 Sum_probs=72.8
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-CcccccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~~~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|..|..+. ++ -.+|+..|+...+-.. .... +-.|.. +++.+..+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~--------~~---------~~~v~gvD~s~~ml~~---a~~~~~v~~~~---~~~e~~~~ 95 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLA--------EF---------FERVHAVDPGEAQIRQ---ALRHPRVTYAV---APAEDTGL 95 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHH--------TT---------CSEEEEEESCHHHHHT---CCCCTTEEEEE---CCTTCCCC
T ss_pred CCCCEEEEcCCCCHHHHHHH--------Hh---------CCEEEEEeCcHHhhhh---hhhcCCceeeh---hhhhhhcc
Confidence 34689999999999998874 22 1378999987655321 1111 112333 46766679
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|++|+|+|+|+.++||+. ...||+.-++-|||||+|++...
T Consensus 96 ~~~sfD~v~~~~~~h~~~---------------------------------------~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 96 PPASVDVAIAAQAMHWFD---------------------------------------LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp CSSCEEEEEECSCCTTCC---------------------------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCcccEEEEeeehhHhh---------------------------------------HHHHHHHHHHHcCCCCEEEEEEC
Confidence 999999999999999963 11366677889999999999988
Q ss_pred cCCC
Q 018250 216 TGPS 219 (359)
Q Consensus 216 g~~~ 219 (359)
+...
T Consensus 137 ~~~~ 140 (257)
T 4hg2_A 137 GLTR 140 (257)
T ss_dssp CCCB
T ss_pred CCCC
Confidence 7664
No 26
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.21 E-value=4.1e-09 Score=98.28 Aligned_cols=160 Identities=18% Similarity=0.304 Sum_probs=97.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----CcccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKYYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~~~~~vpgsfy~ 132 (359)
...+|+|+|||+|..+..++ +.+ ..+|+..|+..+.....-+.+.. ..+ .-+.+++..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~--------~~~--------~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~--~~~~~d~~~ 125 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAV--------EKY--------DVNVVGLTLSKNQANHVQQLVANSENLRSK--RVLLAGWEQ 125 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH--------CCEEEEEESCHHHHHHHHHHHHTCCCCSCE--EEEESCGGG
T ss_pred CcCEEEEECCcccHHHHHHH--------HHc--------CCEEEEEECCHHHHHHHHHHHHhcCCCCCe--EEEECChhh
Confidence 35799999999999988874 222 13788888876555444333221 111 111234422
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
+| +++|+|+|..++|++.. .|+..+|+.-++-|+|||++++
T Consensus 126 --~~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 126 --FD-EPVDRIVSIGAFEHFGH------------------------------------ERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp --CC-CCCSEEEEESCGGGTCT------------------------------------TTHHHHHHHHHHHSCTTCEEEE
T ss_pred --CC-CCeeEEEEeCchhhcCh------------------------------------HHHHHHHHHHHHhcCCCCEEEE
Confidence 35 89999999999999642 1445678888999999999999
Q ss_pred EeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCcc-ccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 213 SLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVP-AYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P-~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
..+...+.......+...... . ..+.+..... ..| ...|+.+++.+.++++| |++..++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~----------~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 228 (287)
T 1kpg_A 167 HTITGLHPKEIHERGLPMSFT-F-ARFLKFIVTE----------IFPGGRLPSIPMVQECASANG-FTVTRVQSL 228 (287)
T ss_dssp EEEEECCHHHHTTTTCSCHHH-H-HHHHHHHHHH----------TSTTCCCCCHHHHHHHHHTTT-CEEEEEEEC
T ss_pred EEecCCCcccccccccccccc-c-cchhhhHHhe----------eCCCCCCCCHHHHHHHHHhCC-cEEEEEEeC
Confidence 998765411000000000000 0 0111111110 111 25679999999999999 999888765
No 27
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.18 E-value=1.8e-10 Score=104.45 Aligned_cols=142 Identities=15% Similarity=0.134 Sum_probs=101.5
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGRLF 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~l~ 135 (359)
..+|+|+|||+|..+..++ .+..+|+..|+........-+..+.. .--+.-+.+++.+ +.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~-----------------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~ 128 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMA-----------------SPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR 128 (235)
T ss_dssp CEEEEEETCTTCHHHHHHC-----------------BTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC
T ss_pred CCCEEEeCCCCCHHHHHHH-----------------hCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC
Confidence 3599999999999998773 13468999999876665554444321 0112222346644 45
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|++++|+|+++.++||+. + .|...+|+.-++-|+|||++++...
T Consensus 129 ~~~~fD~v~~~~~l~~~~---~---------------------------------~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 129 PTELFDLIFDYVFFCAIE---P---------------------------------EMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp CSSCEEEEEEESSTTTSC---G---------------------------------GGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCeeEEEEChhhhcCC---H---------------------------------HHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 778999999999999964 1 1445678888899999999999876
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecC
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQP 289 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~ 289 (359)
..... ...|.+..+.+++.+++++.| |++..++.....
T Consensus 173 ~~~~~-----------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~ 210 (235)
T 3lcc_A 173 PITDH-----------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAVSVEENPHA 210 (235)
T ss_dssp CCSCC-----------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEEEEEECTTC
T ss_pred ccccc-----------------------------------CCCCCccCCHHHHHHHHHHcC-CeEEEEEecCCc
Confidence 54321 112335689999999999999 999999987543
No 28
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.18 E-value=3.7e-10 Score=100.28 Aligned_cols=155 Identities=14% Similarity=0.093 Sum_probs=97.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC-CCcccccccCcccccCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP-PRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~-~~~~~~~~vpgsfy~~l~p 136 (359)
..+|+|+|||+|..+..+. +. ..+++..|+........-+ .. .+--|+ .+++.+. +|
T Consensus 47 ~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~~D~s~~~~~~a~~-~~~~~~~~~---~~d~~~~-~~ 104 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLS--------GL---------ADRVTALDGSAEMIAEAGR-HGLDNVEFR---QQDLFDW-TP 104 (218)
T ss_dssp CSEEEEESCTTSHHHHHHH--------HH---------SSEEEEEESCHHHHHHHGG-GCCTTEEEE---ECCTTSC-CC
T ss_pred CCeEEEECCCCCHHHHHHH--------hc---------CCeEEEEeCCHHHHHHHHh-cCCCCeEEE---ecccccC-CC
Confidence 3599999999999998874 22 1478888887644443332 11 111122 2455444 89
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+++.++||+.. .++..+|+.-++-|+|||++++...+
T Consensus 105 ~~~~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 105 DRQWDAVFFAHWLAHVPD------------------------------------DRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp SSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCceeEEEEechhhcCCH------------------------------------HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999999999999999642 13456788888999999999999987
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcC---CCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMG---VISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eG---li~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
+.... . ...+....... .+.. -..+.....+++.+|+.++++++| |+++..+..
T Consensus 149 ~~~~~---------~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 205 (218)
T 3ou2_A 149 DHERR---------L----EQQDDSEPEVAVRRTLQD--GRSFRIVKVFRSPAELTERLTALG-WSCSVDEVH 205 (218)
T ss_dssp CCC-------------------------CEEEEECTT--SCEEEEECCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCccc---------c----chhhhcccccceeeecCC--cchhhHhhcCCCHHHHHHHHHHCC-CEEEeeecc
Confidence 74321 0 00111000000 0000 000111234789999999999999 998777664
No 29
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.18 E-value=5.3e-11 Score=111.66 Aligned_cols=155 Identities=17% Similarity=0.166 Sum_probs=100.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--c----------cccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--K----------YYAA 124 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~----------~~~~ 124 (359)
...+|||+|||+|..++.+. . .+..+|+..|+...+...+-+.+... . .++.
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~---------~-------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~ 134 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSA---------C-------SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIE 134 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTG---------G-------GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhh---------c-------cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhc
Confidence 45799999999999554331 1 01248999999876655443322210 0 0111
Q ss_pred c-------------------cCccccc-C-----CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCH
Q 018250 125 G-------------------VPGSFHG-R-----LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMK 179 (359)
Q Consensus 125 ~-------------------vpgsfy~-~-----l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~ 179 (359)
+ +.+++.+ . -+|++++|+|+|+.+|||+..-
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~------------------------ 190 (289)
T 2g72_A 135 GKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPD------------------------ 190 (289)
T ss_dssp CSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSS------------------------
T ss_pred CcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCC------------------------
Confidence 1 1124443 2 2567889999999999996531
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCcc
Q 018250 180 GVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVP 259 (359)
Q Consensus 180 ~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P 259 (359)
..|+..+|+.-++-|||||+|++...-..+. +. .| ....+
T Consensus 191 ----------~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~-----------~~-----------~~--------~~~~~ 230 (289)
T 2g72_A 191 ----------LASFQRALDHITTLLRPGGHLLLIGALEESW-----------YL-----------AG--------EARLT 230 (289)
T ss_dssp ----------HHHHHHHHHHHHTTEEEEEEEEEEEEESCCE-----------EE-----------ET--------TEEEE
T ss_pred ----------HHHHHHHHHHHHHhcCCCCEEEEEEecCcce-----------EE-----------cC--------Ceeee
Confidence 1256678888999999999999975322210 00 00 11235
Q ss_pred ccCCCHHHHHHHHHhCCceeEeEEEEeecCCCC
Q 018250 260 AYFPYVEELESLIQRNGHFAMERMQQLDQPMRH 292 (359)
Q Consensus 260 ~y~ps~~E~~~~i~~~G~F~i~~le~~~~~~~~ 292 (359)
.++.+.+|+.++++++| |++..++.+..+..+
T Consensus 231 ~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~~~~ 262 (289)
T 2g72_A 231 VVPVSEEEVREALVRSG-YKVRDLRTYIMPAHL 262 (289)
T ss_dssp CCCCCHHHHHHHHHHTT-EEEEEEEEEECCGGG
T ss_pred eccCCHHHHHHHHHHcC-CeEEEeeEeeccccc
Confidence 57889999999999999 999999988654444
No 30
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.17 E-value=1.7e-10 Score=105.59 Aligned_cols=150 Identities=14% Similarity=0.008 Sum_probs=95.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..+..++ +.+ ..+++..|+........-+...... --+.-+.+++.+..
T Consensus 36 ~~~~VLDiGcG~G~~~~~la--------~~~--------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~ 99 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWA--------RDH--------GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV 99 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HHT--------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hhc--------CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC
Confidence 35799999999999988774 222 2478888987655444333221100 00122234665544
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+ ++++|+|+|+.++|++... ..+|+.-++-|+|||++++..
T Consensus 100 ~-~~~fD~V~~~~~~~~~~~~--------------------------------------~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 100 A-NEKCDVAACVGATWIAGGF--------------------------------------AGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp C-SSCEEEEEEESCGGGTSSS--------------------------------------HHHHHHHTTSEEEEEEEEEEE
T ss_pred c-CCCCCEEEECCChHhcCCH--------------------------------------HHHHHHHHHHcCCCeEEEEec
Confidence 5 8999999999999996532 236667789999999999987
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
......... ..+...|. . .....+++.+++.++++++| |++..+...
T Consensus 141 ~~~~~~~~~---------~~~~~~~~--------------~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 187 (256)
T 1nkv_A 141 PYWRQLPAT---------EEIAQACG--------------V-SSTSDFLTLPGLVGAFDDLG-YDVVEMVLA 187 (256)
T ss_dssp EEETTCCSS---------HHHHHTTT--------------C-SCGGGSCCHHHHHHHHHTTT-BCCCEEEEC
T ss_pred CcccCCCCh---------HHHHHHHh--------------c-ccccccCCHHHHHHHHHHCC-CeeEEEEeC
Confidence 644322110 11111110 0 11126789999999999999 998776543
No 31
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.15 E-value=2.5e-10 Score=108.38 Aligned_cols=148 Identities=11% Similarity=0.016 Sum_probs=99.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-----CcccccccCcccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-----RKYYAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-----~~~~~~~vpgsfy 131 (359)
...+|+|+|||+|..+..++ +++ ..+|+..|+........-+.... +--|.. +++.
T Consensus 117 ~~~~vLDiGcG~G~~~~~la--------~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~ 177 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAH--------RRF--------GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRV---CNML 177 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH--------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---CCTT
T ss_pred CCCEEEEecCCCCHHHHHHH--------HHc--------CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEE---CChh
Confidence 45799999999999998885 222 24788888876544333322211 112333 4666
Q ss_pred cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 132 GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 132 ~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
+..+|++++|+|+|+.++||+. + ..+|+.-++-|+|||+++
T Consensus 178 ~~~~~~~~fD~V~~~~~l~~~~--~-------------------------------------~~~l~~~~~~LkpgG~l~ 218 (312)
T 3vc1_A 178 DTPFDKGAVTASWNNESTMYVD--L-------------------------------------HDLFSEHSRFLKVGGRYV 218 (312)
T ss_dssp SCCCCTTCEEEEEEESCGGGSC--H-------------------------------------HHHHHHHHHHEEEEEEEE
T ss_pred cCCCCCCCEeEEEECCchhhCC--H-------------------------------------HHHHHHHHHHcCCCcEEE
Confidence 6568899999999999999963 1 136777889999999999
Q ss_pred EEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 212 FSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 212 l~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
+......+.... ....+..+... ..| .+++.+++.++++++| |++..++.+
T Consensus 219 ~~~~~~~~~~~~----~~~~~~~~~~~------------------~~~-~~~s~~~~~~~l~~aG-f~~~~~~~~ 269 (312)
T 3vc1_A 219 TITGCWNPRYGQ----PSKWVSQINAH------------------FEC-NIHSRREYLRAMADNR-LVPHTIVDL 269 (312)
T ss_dssp EEEEEECTTTCS----CCHHHHHHHHH------------------HTC-CCCBHHHHHHHHHTTT-EEEEEEEEC
T ss_pred EEEccccccccc----hhHHHHHHHhh------------------hcC-CCCCHHHHHHHHHHCC-CEEEEEEeC
Confidence 998766553210 01111111111 011 4789999999999999 999888877
No 32
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.14 E-value=2.2e-10 Score=103.41 Aligned_cols=153 Identities=14% Similarity=0.109 Sum_probs=98.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPK 137 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~ 137 (359)
..+|+|+|||+|..+..+. +. .+ +++..|+........-+..+..--|. .+++.+ ++|+
T Consensus 43 ~~~vLDiGcG~G~~~~~l~--------~~-------~~--~v~gvD~s~~~~~~a~~~~~~~v~~~---~~d~~~-~~~~ 101 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQ--------EH-------FN--DITCVEASEEAISHAQGRLKDGITYI---HSRFED-AQLP 101 (250)
T ss_dssp SSCEEEESCTTSHHHHHHT--------TT-------CS--CEEEEESCHHHHHHHHHHSCSCEEEE---ESCGGG-CCCS
T ss_pred CCcEEEECCCCCHHHHHHH--------Hh-------CC--cEEEEeCCHHHHHHHHHhhhCCeEEE---EccHHH-cCcC
Confidence 4579999999999988773 11 12 78888988765554444443211122 235543 3789
Q ss_pred CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHH-HhhccCceeEEEecc
Q 018250 138 STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARA-EELVPGGLMVFSLIT 216 (359)
Q Consensus 138 ~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra-~EL~pGG~lvl~~~g 216 (359)
+++|+|+|+.+||++.+ ...+|+.-+ +-|+|||+++++.+.
T Consensus 102 ~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 102 RRYDNIVLTHVLEHIDD--------------------------------------PVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp SCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CcccEEEEhhHHHhhcC--------------------------------------HHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 99999999999999643 224677778 999999999999875
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhh----hccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEK----ARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~----~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
... ...... . ..|...... .+.......+.+.+++.++++++| |++.+.+.+.
T Consensus 144 ~~~-----------~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 200 (250)
T 2p7i_A 144 ANA-----------VSRQIA-V-----KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRSGIF 200 (250)
T ss_dssp TTC-----------HHHHHH-H-----HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEEEEE
T ss_pred hHH-----------HHHHHH-H-----HcCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEEEeeeE
Confidence 543 111111 1 123322110 000111124579999999999999 9999888753
No 33
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.13 E-value=2.2e-10 Score=104.89 Aligned_cols=167 Identities=17% Similarity=0.166 Sum_probs=101.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-CcccccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~~~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|..+..++ +.. + -+++..|+........-+.... .--|.. +++....+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~--------~~~-------~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~---~d~~~~~~ 104 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAA--------EHG-------A-KKVLGIDLSERMLTEAKRKTTSPVVCYEQ---KAIEDIAI 104 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HTT-------C-SEEEEEESCHHHHHHHHHHCCCTTEEEEE---CCGGGCCC
T ss_pred CCCEEEEECCCCCHHHHHHH--------HcC-------C-CEEEEEECCHHHHHHHHHhhccCCeEEEE---cchhhCCC
Confidence 46899999999999888774 221 1 2899999977555544444332 112233 46666668
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|++++|+|+|+.++||+. |...+|+.-++-|+|||+++++..
T Consensus 105 ~~~~fD~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 105 EPDAYNVVLSSLALHYIA--------------------------------------SFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp CTTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCeEEEEEchhhhhhh--------------------------------------hHHHHHHHHHHHcCCCcEEEEEeC
Confidence 899999999999999973 233577788899999999999865
Q ss_pred cCCCCCCC------CCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 216 TGPSGIPF------ADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 216 g~~~~~~~------~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
........ ...+....+ .|.....++... ..+..-....|.+|.+|+.++++++| |++..++...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~~e~~ 217 (253)
T 3g5l_A 147 HPVFTADGRQDWYTDETGNKLHW-----PVDRYFNESMRT-SHFLGEDVQKYHRTVTTYIQTLLKNG-FQINSVIEPE 217 (253)
T ss_dssp CHHHHSSSSCSCEECSSCCEEEE-----EECCTTCCCEEE-EEETTEEEEEECCCHHHHHHHHHHTT-EEEEEEECCC
T ss_pred CCccccCccccceeccCCceEEE-----EeccccccceEE-EeeccccCccEecCHHHHHHHHHHcC-CeeeeeecCC
Confidence 32110000 000000000 000000000000 00001134557779999999999999 9998888764
No 34
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.13 E-value=1.3e-10 Score=107.83 Aligned_cols=150 Identities=17% Similarity=0.183 Sum_probs=98.6
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCc-eEEecCCCCCchHHHHHhCCCC--c-------cccc-
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDF-QVFFNDHTENDFNTLFRTLPPR--K-------YYAA- 124 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~-~v~~nDLp~NDFn~lf~~l~~~--~-------~~~~- 124 (359)
....+|+|+|||+|..++.++ . +.+ +|+..|+..++...+-+.+... . -|++
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~--------~---------~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~ 116 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAA--------C---------DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACE 116 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTG--------G---------GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHH--------H---------hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHh
Confidence 346899999999998887653 1 122 6888888877666544322110 0 0111
Q ss_pred ---------------------ccCcccccC-CC---CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCH
Q 018250 125 ---------------------GVPGSFHGR-LF---PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMK 179 (359)
Q Consensus 125 ---------------------~vpgsfy~~-l~---p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~ 179 (359)
.+.++..+. .+ +.+++|+|+|+.+|||+..-+
T Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~----------------------- 173 (263)
T 2a14_A 117 LEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSL----------------------- 173 (263)
T ss_dssp HTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSH-----------------------
T ss_pred cCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCH-----------------------
Confidence 123344332 22 367999999999999964311
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCcc
Q 018250 180 GVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVP 259 (359)
Q Consensus 180 ~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P 259 (359)
.|+...|+.-++-|||||+|+++.....+.. . .| ....+
T Consensus 174 -----------~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~---------~-------------~g--------~~~~~ 212 (263)
T 2a14_A 174 -----------DAYRAALCNLASLLKPGGHLVTTVTLRLPSY---------M-------------VG--------KREFS 212 (263)
T ss_dssp -----------HHHHHHHHHHHTTEEEEEEEEEEEESSCCEE---------E-------------ET--------TEEEE
T ss_pred -----------HHHHHHHHHHHHHcCCCcEEEEEEeecCccc---------e-------------eC--------CeEee
Confidence 2566788888999999999999975433210 0 11 01234
Q ss_pred ccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 260 AYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 260 ~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
.+..+.+|+.+.++++| |++..++...
T Consensus 213 ~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp CCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred ccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 45679999999999999 9999988864
No 35
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.13 E-value=4.8e-10 Score=100.08 Aligned_cols=142 Identities=13% Similarity=0.041 Sum_probs=100.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~ 133 (359)
...+|+|+|||+|..+..++ +.. .|..+++..|+........-+.+.. .. +.-+.+++...
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~--------~~~------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--~~~~~~d~~~~ 100 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLS--------KMV------GEKGKVYAIDVQEEMVNYAWEKVNKLGLKN--VEVLKSEENKI 100 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHH--------HHH------TTTCEEEEEESCHHHHHHHHHHHHHHTCTT--EEEEECBTTBC
T ss_pred CCCEEEEEecCCCHHHHHHH--------HHh------CCCcEEEEEECCHHHHHHHHHHHHHcCCCc--EEEEecccccC
Confidence 35799999999999999885 332 2456899999977555444333221 11 11223466566
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.++++++|+|+++.++||+.+ ...+|+.-++-|+|||++++.
T Consensus 101 ~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 101 PLPDNTVDFIFMAFTFHELSE--------------------------------------PLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp SSCSSCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCeeEEEeehhhhhcCC--------------------------------------HHHHHHHHHHHhCCCeEEEEE
Confidence 689999999999999999642 234677788999999999998
Q ss_pred eccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 214 LITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
......... ......+.+.+++...++++| |++.+...+
T Consensus 143 ~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 181 (219)
T 3dh0_A 143 DWKKEERDK---------------------------------GPPPEEVYSEWEVGLILEDAG-IRVGRVVEV 181 (219)
T ss_dssp EECSSCCSS---------------------------------SCCGGGSCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred Eeccccccc---------------------------------CCchhcccCHHHHHHHHHHCC-CEEEEEEee
Confidence 876554210 011124568999999999999 998887765
No 36
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.12 E-value=2.2e-10 Score=101.99 Aligned_cols=141 Identities=18% Similarity=0.197 Sum_probs=99.8
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..++ +. ..+++..|+........-+... +..+.+++.... +
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~d~~~~~-~ 99 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAML--------AA---------GFDVDATDGSPELAAEASRRLG-----RPVRTMLFHQLD-A 99 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHH--------HT---------TCEEEEEESCHHHHHHHHHHHT-----SCCEECCGGGCC-C
T ss_pred CCCcEEEECCCCCHHHHHHH--------Hc---------CCeEEEECCCHHHHHHHHHhcC-----CceEEeeeccCC-C
Confidence 35799999999999988774 21 2488999987655444433321 111224554444 8
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+++.++|++.. .|+..+|+.-++-|+|||++++++..
T Consensus 100 ~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 100 IDAYDAVWAHACLLHVPR------------------------------------DELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp CSCEEEEEECSCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcEEEEEecCchhhcCH------------------------------------HHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 899999999999999641 25667888889999999999999764
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
..... .+.+...+.+.+.+++.++++++|.|++..++...
T Consensus 144 ~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~ 183 (211)
T 3e23_A 144 GEGEG-------------------------------RDKLARYYNYPSEEWLRARYAEAGTWASVAVESSE 183 (211)
T ss_dssp CSSCE-------------------------------ECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred CCccc-------------------------------ccccchhccCCCHHHHHHHHHhCCCcEEEEEEecc
Confidence 33210 01223345678999999999999878888877654
No 37
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.12 E-value=1.9e-10 Score=104.95 Aligned_cols=147 Identities=14% Similarity=0.107 Sum_probs=100.5
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~ 135 (359)
....+|+|+|||+|..+..+++ .. ..+++..|+........-+...... -+.-+.+++....+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~--------~~--------~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~ 154 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLT--------KL--------YATTDLLEPVKHMLEEAKRELAGMP-VGKFILASMETATL 154 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHH--------HH--------CSEEEEEESCHHHHHHHHHHTTTSS-EEEEEESCGGGCCC
T ss_pred cCCCEEEEECCCcCHHHHHHHH--------hh--------cCEEEEEeCCHHHHHHHHHHhccCC-ceEEEEccHHHCCC
Confidence 3467999999999999987752 21 1268888887655554444443210 11122346656567
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|++++|+|+++.++|+++. .|+..+|+.-++-|+|||++++...
T Consensus 155 ~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 155 PPNTYDLIVIQWTAIYLTD------------------------------------ADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp CSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCeEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 8899999999999999642 1456688888999999999999886
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
....... . .....+.++++.++++++++++| |++.+++..
T Consensus 199 ~~~~~~~--------~----------------------~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 238 (254)
T 1xtp_A 199 CSTGDRF--------L----------------------VDKEDSSLTRSDIHYKRLFNESG-VRVVKEAFQ 238 (254)
T ss_dssp BC--CCE--------E----------------------EETTTTEEEBCHHHHHHHHHHHT-CCEEEEEEC
T ss_pred CCCcccc--------e----------------------ecccCCcccCCHHHHHHHHHHCC-CEEEEeeec
Confidence 4322110 0 00112345679999999999999 999888765
No 38
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.12 E-value=1.1e-10 Score=103.40 Aligned_cols=156 Identities=12% Similarity=0.090 Sum_probs=96.9
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccCCCC
Q 018250 59 VRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 59 ~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~l~p 136 (359)
.+|+|+|||+|..+..+. +. +..+++..|+........-+.+... .--+.-+.+++.+..+|
T Consensus 45 ~~vLdiG~G~G~~~~~l~--------~~--------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALA--------KQ--------SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp EEEEEETCTTSHHHHHHH--------HH--------SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred CEEEEECCCCCHHHHHHH--------Hc--------CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 399999999999888874 22 2468899998765544443332210 00011223466666689
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+++.++||+. |...+|+.-++-|+|||++++...-
T Consensus 109 ~~~~D~v~~~~~l~~~~--------------------------------------~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFWE--------------------------------------DVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp TTCEEEEEEESCGGGCS--------------------------------------CHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccccEEEECchHhhcc--------------------------------------CHHHHHHHHHHhCCCCCEEEEEecc
Confidence 99999999999999963 2334777788999999999997632
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhcc-CCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKART-FNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~-f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
... .+.+.+...+... . ..+.. +.......+.+++.++++++| |++.++...
T Consensus 151 ~~~----------~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~~~ 203 (219)
T 3dlc_A 151 GNK----------ELRDSISAEMIRK---N----PDWKEFNRKNISQENVERFQNVLDEIG-ISSYEIILG 203 (219)
T ss_dssp SSH----------HHHHHHHHHHHHH---C----TTHHHHHHHHSSHHHHHHHHHHHHHHT-CSSEEEEEE
T ss_pred CcH----------HHHHHHHHHHHHh---H----HHHHhhhhhccccCCHHHHHHHHHHcC-CCeEEEEec
Confidence 221 1222233222221 0 00000 001123348899999999999 987766643
No 39
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.12 E-value=5.8e-10 Score=100.92 Aligned_cols=148 Identities=14% Similarity=0.147 Sum_probs=100.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-CcccccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~~~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|..+..+. +. ..+++..|+........-+.... +--|+. +++.+..+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~---~d~~~~~~ 112 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLS--------RT---------GYKAVGVDISEVMIQKGKERGEGPDLSFIK---GDLSSLPF 112 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESCHHHHHHHHTTTCBTTEEEEE---CBTTBCSS
T ss_pred CCCeEEEEcCCCCHHHHHHH--------Hc---------CCeEEEEECCHHHHHHHHhhcccCCceEEE---cchhcCCC
Confidence 35699999999999988774 21 24788999876444333322211 112232 46666668
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|++++|+|+++.++||+.+ ...+|+.-++-|+|||+++++..
T Consensus 113 ~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 113 ENEQFEAIMAINSLEWTEE--------------------------------------PLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp CTTCEEEEEEESCTTSSSC--------------------------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCccEEEEcChHhhccC--------------------------------------HHHHHHHHHHHhCCCeEEEEEEc
Confidence 8999999999999999632 22467778899999999999997
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
+....... . .+. ............+.+++..+++++| |++...+.+-
T Consensus 155 ~~~~~~~~-----~--------~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 201 (242)
T 3l8d_A 155 GPTAKPRE-----N--------SYP-----------RLYGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGVY 201 (242)
T ss_dssp CTTCGGGG-----G--------GGG-----------GGGTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred CCcchhhh-----h--------hhh-----------hhccccccccCCCHHHHHHHHHHcC-CEEEEeeccc
Confidence 66542110 0 001 0112233456689999999999999 9998887663
No 40
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.10 E-value=1.9e-10 Score=102.79 Aligned_cols=140 Identities=10% Similarity=0.018 Sum_probs=96.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----------------Cc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----------------RK 120 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----------------~~ 120 (359)
...+|+|+|||+|.++..++ ++ ..+|+..|+...+-....+.... +-
T Consensus 22 ~~~~vLD~GCG~G~~~~~la--------~~---------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v 84 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLS--------GQ---------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGI 84 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHH--------HH---------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSS
T ss_pred CCCEEEEeCCCCcHhHHHHH--------HC---------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCcc
Confidence 45799999999999999875 22 24788888888776665544221 11
Q ss_pred ccccccCcccccCCCCC-CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHH
Q 018250 121 YYAAGVPGSFHGRLFPK-STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNA 199 (359)
Q Consensus 121 ~~~~~vpgsfy~~l~p~-~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~ 199 (359)
-|.. +++.+..+++ +++|+|++..++|++. . .|...+|+.
T Consensus 85 ~~~~---~d~~~l~~~~~~~fD~v~~~~~l~~l~---~---------------------------------~~~~~~l~~ 125 (203)
T 1pjz_A 85 EIWC---GDFFALTARDIGHCAAFYDRAAMIALP---A---------------------------------DMRERYVQH 125 (203)
T ss_dssp EEEE---ECCSSSTHHHHHSEEEEEEESCGGGSC---H---------------------------------HHHHHHHHH
T ss_pred EEEE---CccccCCcccCCCEEEEEECcchhhCC---H---------------------------------HHHHHHHHH
Confidence 1222 4665555554 8999999999999963 1 134457888
Q ss_pred HHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCcee
Q 018250 200 RAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFA 279 (359)
Q Consensus 200 Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~ 279 (359)
-++-|+|||++++.+...+.. ...-|.+..+.+|+++.++. | |+
T Consensus 126 ~~r~LkpgG~~~l~~~~~~~~----------------------------------~~~~~~~~~~~~el~~~~~~-g-f~ 169 (203)
T 1pjz_A 126 LEALMPQACSGLLITLEYDQA----------------------------------LLEGPPFSVPQTWLHRVMSG-N-WE 169 (203)
T ss_dssp HHHHSCSEEEEEEEEESSCSS----------------------------------SSSSCCCCCCHHHHHHTSCS-S-EE
T ss_pred HHHHcCCCcEEEEEEEecCcc----------------------------------ccCCCCCCCCHHHHHHHhcC-C-cE
Confidence 899999999966655422210 01123345789999999987 8 99
Q ss_pred EeEEEEeec
Q 018250 280 MERMQQLDQ 288 (359)
Q Consensus 280 i~~le~~~~ 288 (359)
+..++....
T Consensus 170 i~~~~~~~~ 178 (203)
T 1pjz_A 170 VTKVGGQDT 178 (203)
T ss_dssp EEEEEESSC
T ss_pred EEEeccccc
Confidence 988887653
No 41
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1e-10 Score=110.17 Aligned_cols=223 Identities=12% Similarity=0.102 Sum_probs=126.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC------CCCcccccccCccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL------PPRKYYAAGVPGSF 130 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l------~~~~~~~~~vpgsf 130 (359)
...+|+|+|||+|..+..++ +.+ .+..+|+..|+........-+.+ ..+--|.. +++
T Consensus 36 ~~~~vLDiGcG~G~~~~~la--------~~~------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~---~d~ 98 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMA--------QEL------KPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKI---SSS 98 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHH--------HHS------SCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEE---CCT
T ss_pred CCCEEEEECCCCCHHHHHHH--------HhC------CCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEE---cCH
Confidence 46899999999999999885 222 13468999998775554443321 11112332 355
Q ss_pred ccCCCCC------CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018250 131 HGRLFPK------STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEEL 204 (359)
Q Consensus 131 y~~l~p~------~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 204 (359)
.+..+++ +++|+|+|+.++||+ + +..+|+.-++-|
T Consensus 99 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~--------------------------------------~~~~l~~~~~~L 139 (299)
T 3g5t_A 99 DDFKFLGADSVDKQKIDMITAVECAHWF-D--------------------------------------FEKFQRSAYANL 139 (299)
T ss_dssp TCCGGGCTTTTTSSCEEEEEEESCGGGS-C--------------------------------------HHHHHHHHHHHE
T ss_pred HhCCccccccccCCCeeEEeHhhHHHHh-C--------------------------------------HHHHHHHHHHhc
Confidence 4444666 899999999999997 2 123677788999
Q ss_pred ccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccC-CCHHHHHHHHHhCCce-----
Q 018250 205 VPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYF-PYVEELESLIQRNGHF----- 278 (359)
Q Consensus 205 ~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~-ps~~E~~~~i~~~G~F----- 278 (359)
+|||+|++...+.+..... ..+...+..+... +....|++. |..+.+++.+++.| |
T Consensus 140 kpgG~l~i~~~~~~~~~~~---------~~~~~~~~~~~~~--------~~~~~~~w~~p~~~~~~~~l~~~g-fp~~~f 201 (299)
T 3g5t_A 140 RKDGTIAIWGYADPIFPDY---------PEFDDLMIEVPYG--------KQGLGPYWEQPGRSRLRNMLKDSH-LDPELF 201 (299)
T ss_dssp EEEEEEEEEEEEEEECTTC---------GGGTTHHHHHHHC--------TTTTGGGSCTTHHHHHHTTTTTCC-CCTTTE
T ss_pred CCCcEEEEEecCCccccCc---------HHHHHHHHHhccC--------cccccchhhchhhHHHHHhhhccC-CChHHc
Confidence 9999999976654321100 0111122332211 012334444 88999999999988 6
Q ss_pred eEeEEEEeec-------------CCCCCC---CChhHHHHHHHHHhh--hhhhh-ccCH--HHHHHHHHHHHHHHHHHhh
Q 018250 279 AMERMQQLDQ-------------PMRHKT---FPAQFYLSHLRAVLE--GLIGK-HFGE--ELLENIFNHINTKEAEILS 337 (359)
Q Consensus 279 ~i~~le~~~~-------------~~~~~~---~~~~~v~~~iRa~~~--~~l~~-~~~e--~i~delf~r~~~~~~~~~~ 337 (359)
.-.+...+.. ...+.. .+...+.+++++|.. ..... .-++ ++++++.+++ +++.+.
T Consensus 202 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~s~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~ 278 (299)
T 3g5t_A 202 HDIQVSYFCAEDVRDKVKLHQHTKKPLLIRKQVTLVEFADYVRTWSAYHQWKQDPKNKDKEDVADWFIKES---LRRRPE 278 (299)
T ss_dssp EEEEEEEECGGGGGCHHHHHHCSSCCCCCEEEECHHHHHHHHTTSHHHHHHHHCGGGTTSCCHHHHHHHHH---HHHCTT
T ss_pred CcceEEEecccccccccccccCCCCceeeeccccHHHHHHHHHHhHHHHHHHhcccCCchhhHHHHHHHHH---HHhccC
Confidence 3334444422 111110 234578888887654 22220 1222 5555555541 333322
Q ss_pred hh-hcCCcceEEEEEEEEec
Q 018250 338 IH-NGKLHKEIEVFVVLKRI 356 (359)
Q Consensus 338 ~~-~~~~~~~~~~~~~l~r~ 356 (359)
.. ..+.+-...+++++.||
T Consensus 279 ~~~~~~~~~~w~~~~~~~rk 298 (299)
T 3g5t_A 279 LSTNTKIEVVWNTFYKLGKR 298 (299)
T ss_dssp CCTTCCEEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEecceeeeEec
Confidence 21 11223456677777765
No 42
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.09 E-value=2.4e-09 Score=95.51 Aligned_cols=153 Identities=12% Similarity=0.087 Sum_probs=98.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCccccc--CC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHG--RL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~--~l 134 (359)
...+|+|+|||+|..+..+. + .+ .+++..|+........-+... . + +.+++.. ..
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~--------~--------~~-~~~~~~D~~~~~~~~~~~~~~--~-~---~~~d~~~~~~~ 88 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIK--------E--------NG-TRVSGIEAFPEAAEQAKEKLD--H-V---VLGDIETMDMP 88 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------T--------TT-CEEEEEESSHHHHHHHHTTSS--E-E---EESCTTTCCCC
T ss_pred CCCcEEEeCCCCCHHHHHHH--------h--------cC-CeEEEEeCCHHHHHHHHHhCC--c-E---EEcchhhcCCC
Confidence 45799999999999998774 1 12 588889987644433322221 1 2 2234433 44
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+|++++|+++++.++|++... ..+|+.-.+-|+|||+++++.
T Consensus 89 ~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 89 YEEEQFDCVIFGDVLEHLFDP--------------------------------------WAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp SCTTCEEEEEEESCGGGSSCH--------------------------------------HHHHHHTGGGEEEEEEEEEEE
T ss_pred CCCCccCEEEECChhhhcCCH--------------------------------------HHHHHHHHHHcCCCCEEEEEe
Confidence 788999999999999996531 246777789999999999998
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhc-cCCccccCCCHHHHHHHHHhCCceeEeEEEEeec
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKAR-TFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQ 288 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d-~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~ 288 (359)
..... +..+. .+..... ...... .-.....+.+.+|+.++++++| |++..++....
T Consensus 131 ~~~~~------------~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 187 (230)
T 3cc8_A 131 PNVSH------------ISVLA----PLLAGNW-TYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKVDRVYV 187 (230)
T ss_dssp ECTTS------------HHHHH----HHHTTCC-CCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEEEEEEC
T ss_pred CCcch------------HHHHH----HHhcCCc-eeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEEEeccc
Confidence 65432 11111 1111111 100000 0012235689999999999999 99999888754
No 43
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.08 E-value=1e-08 Score=97.19 Aligned_cols=159 Identities=15% Similarity=0.213 Sum_probs=98.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----C-cccccccCcccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----R-KYYAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~-~~~~~~vpgsfy 131 (359)
...+|+|+|||+|..+..++ +.+ ..+|+..|+........-+.... . --+.. +++.
T Consensus 90 ~~~~vLDiGcG~G~~~~~la--------~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~ 150 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAV--------ERF--------DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLL---QGWE 150 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH--------CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE---SCGG
T ss_pred CcCEEEEEcccchHHHHHHH--------HHC--------CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE---CChH
Confidence 35799999999999988774 222 13788888876555444333221 1 11222 3442
Q ss_pred cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 132 GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 132 ~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
+ +| +++|+|+|+.++|++.. .|...+|+.-.+-|+|||+++
T Consensus 151 ~--~~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~ 191 (318)
T 2fk8_A 151 D--FA-EPVDRIVSIEAFEHFGH------------------------------------ENYDDFFKRCFNIMPADGRMT 191 (318)
T ss_dssp G--CC-CCCSEEEEESCGGGTCG------------------------------------GGHHHHHHHHHHHSCTTCEEE
T ss_pred H--CC-CCcCEEEEeChHHhcCH------------------------------------HHHHHHHHHHHHhcCCCcEEE
Confidence 2 24 89999999999999642 145567888889999999999
Q ss_pred EEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCcc-ccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 212 FSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVP-AYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 212 l~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P-~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
+..+...+......... .+ ..-...+.+.... ...| .++|+.+++.+.++++| |++..++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 254 (318)
T 2fk8_A 192 VQSSVSYHPYEMAARGK-KL-SFETARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-FTVPEPLSL 254 (318)
T ss_dssp EEEEECCCHHHHHTTCH-HH-HHHHHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-CBCCCCEEC
T ss_pred EEEeccCCchhhhhccc-cc-cccccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-CEEEEEEec
Confidence 99987664210000000 00 0000111111111 1122 36789999999999999 999877765
No 44
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.07 E-value=9.4e-10 Score=104.08 Aligned_cols=167 Identities=11% Similarity=0.070 Sum_probs=105.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..++.++ .. ..|..+++..|+........-+....... -+.-+.+++.+..
T Consensus 118 ~~~~vLDiGcG~G~~~~~la--------~~------~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 183 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALD--------YS------ACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD 183 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSC--------CT------TCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hh------cCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC
Confidence 45789999999999888662 01 14567999999977665555444432110 0222335777766
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
++ +++|+|+|+.++||+... .....+|+.-++-|+|||++++..
T Consensus 184 ~~-~~fD~v~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 184 TR-EGYDLLTSNGLNIYEPDD-----------------------------------ARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp CC-SCEEEEECCSSGGGCCCH-----------------------------------HHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cc-CCeEEEEECChhhhcCCH-----------------------------------HHHHHHHHHHHHhcCCCeEEEEEe
Confidence 77 999999999999985421 123347778889999999999999
Q ss_pred ccCCCCCCCCCcc-----hhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 215 ITGPSGIPFADTV-----QGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 215 ~g~~~~~~~~~~~-----~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
.+++........+ ...........+..... ..-..+++.+|+.+.++++| |++.+++..
T Consensus 228 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~aG-F~~v~~~~~ 291 (305)
T 3ocj_A 228 LTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQ------------PRWNALRTHAQTRAQLEEAG-FTDLRFEDD 291 (305)
T ss_dssp CCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTC------------CSCCCCCCHHHHHHHHHHTT-CEEEEEECC
T ss_pred cCCCCcccccccceeeccccchhhhhhhHHHHHHh------------hhhhccCCHHHHHHHHHHCC-CEEEEEEcc
Confidence 8765432111110 00001111112221111 11115689999999999999 999888763
No 45
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.06 E-value=3.1e-09 Score=95.35 Aligned_cols=142 Identities=15% Similarity=0.121 Sum_probs=91.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPK 137 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~ 137 (359)
..+|+|+|||+|..+..+... +..|+........-+. . +..+.+++....+++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~---------------------~~vD~s~~~~~~a~~~----~--~~~~~~d~~~~~~~~ 100 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK---------------------IGVEPSERMAEIARKR----G--VFVLKGTAENLPLKD 100 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC---------------------EEEESCHHHHHHHHHT----T--CEEEECBTTBCCSCT
T ss_pred CCcEEEeCCCCCHHHHHHHHH---------------------hccCCCHHHHHHHHhc----C--CEEEEcccccCCCCC
Confidence 568999999999998877310 4445443332222111 0 111123444445788
Q ss_pred CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccC
Q 018250 138 STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITG 217 (359)
Q Consensus 138 ~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~ 217 (359)
+++|+|+++.++||+.+ ...+|+.-.+-|+|||++++..+..
T Consensus 101 ~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 101 ESFDFALMVTTICFVDD--------------------------------------PERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp TCEEEEEEESCGGGSSC--------------------------------------HHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred CCeeEEEEcchHhhccC--------------------------------------HHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 89999999999999642 2246777788999999999998755
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 218 PSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 218 ~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
.+ .+.. .+..+ ..+ ..+.....+.+.+++.+++++.| |++..+....
T Consensus 143 ~~-----------~~~~---~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~~ 189 (219)
T 1vlm_A 143 ES-----------FLGR---EYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQTL 189 (219)
T ss_dssp SS-----------HHHH---HHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEEC
T ss_pred cc-----------HHHH---HHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEeccc
Confidence 43 1111 11111 111 12333456789999999999999 9998888764
No 46
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.05 E-value=1e-08 Score=94.73 Aligned_cols=166 Identities=7% Similarity=-0.019 Sum_probs=100.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCC------chHHHHHhCCCCc--ccccccCc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTEN------DFNTLFRTLPPRK--YYAAGVPG 128 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~N------DFn~lf~~l~~~~--~~~~~vpg 128 (359)
...+|+|+|||+|..+..++ +++ .|..+++..|+... .....-+.+.... --+.-+.+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~--------~~~------g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~ 108 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLA--------DQV------GSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFN 108 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH------CTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECS
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHh------CCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 35799999999999998874 332 13468999999876 4444333322100 00111223
Q ss_pred c-cc--cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018250 129 S-FH--GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELV 205 (359)
Q Consensus 129 s-fy--~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 205 (359)
+ +. ...+|++++|+|+|+.++|++... ..+++...+-++
T Consensus 109 d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~~~~~~~l~~ 150 (275)
T 3bkx_A 109 TNLSDDLGPIADQHFDRVVLAHSLWYFASA--------------------------------------NALALLFKNMAA 150 (275)
T ss_dssp CCTTTCCGGGTTCCCSEEEEESCGGGSSCH--------------------------------------HHHHHHHHHHTT
T ss_pred ChhhhccCCCCCCCEEEEEEccchhhCCCH--------------------------------------HHHHHHHHHHhC
Confidence 3 32 233678999999999999996531 124445555556
Q ss_pred cCceeEEEeccCCCCCCCCCcchhHHHHHHHH-HHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEE
Q 018250 206 PGGLMVFSLITGPSGIPFADTVQGATYNFLGS-CLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQ 284 (359)
Q Consensus 206 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~-al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le 284 (359)
|||++++........... ....++..+.. .+... . .+.....+.+++.+++.++++++| |++.+.+
T Consensus 151 ~gG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~s~~~l~~~l~~aG-f~~~~~~ 217 (275)
T 3bkx_A 151 VCDHVDVAEWSMQPTALD---QIGHLQAAMIQGLLYAI-A--------PSDVANIRTLITPDTLAQIAHDNT-WTYTAGT 217 (275)
T ss_dssp TCSEEEEEEECSSCSSGG---GHHHHHHHHHHHHHHHH-S--------CCTTCSCCCCCCHHHHHHHHHHHT-CEEEECC
T ss_pred CCCEEEEEEecCCCCchh---hhhHHHHHHHHHHHhhc-c--------ccccccccccCCHHHHHHHHHHCC-CeeEEEE
Confidence 699999998776543210 11111121211 11111 0 112234456899999999999999 9998888
Q ss_pred Eee
Q 018250 285 QLD 287 (359)
Q Consensus 285 ~~~ 287 (359)
.+.
T Consensus 218 ~~~ 220 (275)
T 3bkx_A 218 IVE 220 (275)
T ss_dssp CBC
T ss_pred Eec
Confidence 773
No 47
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.05 E-value=9.7e-10 Score=102.42 Aligned_cols=161 Identities=16% Similarity=0.146 Sum_probs=101.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..+..+. +. +..+++..|+........-+..+... .-+.-+.+++.+..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~--------~~--------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 127 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYE--------RA--------GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH 127 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHH--------HH--------TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSC
T ss_pred CCCeEEEECCCCCHHHHHHH--------HC--------CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccc
Confidence 35799999999999988763 22 12388999987766554444332210 00112234555555
Q ss_pred C-CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 135 F-PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 135 ~-p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
+ +++++|+|+++.++||+-.. ..|...+|+.-++-|+|||+++++
T Consensus 128 ~~~~~~fD~v~~~~~l~~~~~~----------------------------------~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 128 MDLGKEFDVISSQFSFHYAFST----------------------------------SESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CCCSSCEEEEEEESCGGGGGSS----------------------------------HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCCCcCEEEECchhhhhcCC----------------------------------HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 6 68999999999999994210 125667888889999999999999
Q ss_pred eccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--------------CCh---hhh-----cc-CCccccCCCHHHHHH
Q 018250 214 LITGPSGIPFADTVQGATYNFLGSCLWDLAKMGV--------------ISE---EKA-----RT-FNVPAYFPYVEELES 270 (359)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGl--------------i~~---e~~-----d~-f~~P~y~ps~~E~~~ 270 (359)
.+.... +... +. .... ++. .+. +. -..|.++.+.+|++.
T Consensus 174 ~~~~~~-----------~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ 235 (298)
T 1ri5_A 174 VPSRDV-----------ILER----YK---QGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVD 235 (298)
T ss_dssp EECHHH-----------HHHH----HH---HTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHH
T ss_pred ECCHHH-----------HHHH----Hc---cCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHH
Confidence 864321 1111 11 1000 000 000 00 123457789999999
Q ss_pred HHHhCCceeEeEEEEe
Q 018250 271 LIQRNGHFAMERMQQL 286 (359)
Q Consensus 271 ~i~~~G~F~i~~le~~ 286 (359)
+++++| |++...+.+
T Consensus 236 ll~~aG-f~~v~~~~~ 250 (298)
T 1ri5_A 236 GFKRLG-LSLVERKGF 250 (298)
T ss_dssp HHHTTT-EEEEEEEEH
T ss_pred HHHHcC-CEEEEecCH
Confidence 999999 999888766
No 48
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.03 E-value=5e-09 Score=98.03 Aligned_cols=211 Identities=10% Similarity=-0.010 Sum_probs=115.9
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCC-CceEEecCCCCCchHHHHHhCCCCcccccccCcccccCC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVP-DFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRL 134 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p-~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l 134 (359)
....+|+|+|||+|..+..++ +. .| ..+++..|+........-+.......-+.-+.+++.+..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~--------~~-------~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 85 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLM--------PL-------LPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE 85 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHT--------TT-------SCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCC
T ss_pred CCCCeEEEecCCCCHHHHHHH--------Hh-------CCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcC
Confidence 346899999999999988773 22 23 368999999775554433332211101111224555544
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+ ++++|+|+++.++|++.+ +..+|+.-.+-|+|||++++..
T Consensus 86 ~-~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 86 L-NDKYDIAICHAFLLHMTT--------------------------------------PETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp C-SSCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred c-CCCeeEEEECChhhcCCC--------------------------------------HHHHHHHHHHHcCCCCEEEEEe
Confidence 5 479999999999999642 3346777889999999999887
Q ss_pred ccCC----CCCCCCCcc-hhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee--
Q 018250 215 ITGP----SGIPFADTV-QGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD-- 287 (359)
Q Consensus 215 ~g~~----~~~~~~~~~-~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~-- 287 (359)
+... .....+.+. .......+...+.+.... . ...+++.+++..+++++| |+..+.....
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~l~~~l~~aG-F~~v~~~~~~~~ 193 (284)
T 3gu3_A 127 PHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQR----------N--GKDGNIGMKIPIYLSELG-VKNIECRVSDKV 193 (284)
T ss_dssp CCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHH----------T--CCCTTGGGTHHHHHHHTT-CEEEEEEECCCC
T ss_pred cchhcccccceecCcchhhccchHHHHHHHHHHhhh----------h--cccccHHHHHHHHHHHcC-CCeEEEEEcCCc
Confidence 6510 000000000 000012222222221111 1 113455678999999999 9887764432
Q ss_pred --cCCCCCCCChhHHHHH------------HHHHhhhhhhhccCHHHHHHHHHHHHHHHH
Q 018250 288 --QPMRHKTFPAQFYLSH------------LRAVLEGLIGKHFGEELLENIFNHINTKEA 333 (359)
Q Consensus 288 --~~~~~~~~~~~~v~~~------------iRa~~~~~l~~~~~e~i~delf~r~~~~~~ 333 (359)
.+....+.+++.+... +..+...++...+..+-+..++.+..+.++
T Consensus 194 ~~~~~~~~~~d~~~l~~~l~~~G~~~~~~~~~~~~~~l~~~g~~~~e~~~~~~~~~~~~~ 253 (284)
T 3gu3_A 194 NFLDSNMHHNDKNDLYQSLKEEGIAGDPGDKQQFVERLIARGLTYDNALAQYEAELRFFK 253 (284)
T ss_dssp EEECTTCCSHHHHHHHHHHHHTTTTCCCCCHHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCChHHHHHHHHHHHhccccCCcccHHHHHHHHHHccccHHHHHHHHHHHHHHHH
Confidence 2322222122222222 233444444444566666666666655444
No 49
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.03 E-value=9.2e-10 Score=98.02 Aligned_cols=156 Identities=16% Similarity=0.105 Sum_probs=96.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCC-CC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRL-FP 136 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l-~p 136 (359)
..+|+|+|||+|..+..+. +. ..+++..|+........-+. +. ..+..+....+.... .+
T Consensus 53 ~~~vLdiG~G~G~~~~~l~--------~~---------~~~v~~vD~s~~~~~~a~~~-~~-~~~~~~~~~~~~~~~~~~ 113 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALA--------DR---------GIEAVGVDGDRTLVDAARAA-GA-GEVHLASYAQLAEAKVPV 113 (227)
T ss_dssp CSEEEEETCTTCHHHHHHH--------TT---------TCEEEEEESCHHHHHHHHHT-CS-SCEEECCHHHHHTTCSCC
T ss_pred CCEEEEeCCCCCHHHHHHH--------HC---------CCEEEEEcCCHHHHHHHHHh-cc-cccchhhHHhhccccccc
Confidence 4899999999999888774 11 24889999876554433332 21 112221111121223 34
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+|+.++| .. |...+|+.-++-|+|||++++..+.
T Consensus 114 ~~~fD~v~~~~~l~-~~--------------------------------------~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 114 GKDYDLICANFALL-HQ--------------------------------------DIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp CCCEEEEEEESCCC-SS--------------------------------------CCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCccEEEECchhh-hh--------------------------------------hHHHHHHHHHHHhCCCeEEEEEecC
Confidence 55699999999999 22 1224777788999999999999986
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
....... .. ...|....-.|... .....++++++.+|+.++++++| |++..++..
T Consensus 155 ~~~~~~~-~~---------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 209 (227)
T 3e8s_A 155 PWSVADG-DY---------QDGWREESFAGFAG----DWQPMPWYFRTLASWLNALDMAG-LRLVSLQEP 209 (227)
T ss_dssp TTTTCTT-CC---------SCEEEEECCTTSSS----CCCCEEEEECCHHHHHHHHHHTT-EEEEEEECC
T ss_pred ccccCcc-cc---------ccccchhhhhcccc----CcccceEEEecHHHHHHHHHHcC-CeEEEEecC
Confidence 6542110 00 00000000000000 01246778999999999999999 999988874
No 50
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.01 E-value=8.3e-10 Score=100.50 Aligned_cols=146 Identities=14% Similarity=0.078 Sum_probs=100.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC-cccccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR-KYYAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~-~~~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|..+..++ +.. ..+++..|+........-+..... ..-+.-+.+++....+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~--------~~~--------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~ 142 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLL--------LPL--------FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP 142 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTT--------TTT--------CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hhc--------CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCC
Confidence 46799999999999988774 111 247889998776655554444321 1011122346656667
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
+++++|+|+++.++|++.+ .++..+|+.-++-|+|||++++...
T Consensus 143 ~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 143 EPDSYDVIWIQWVIGHLTD------------------------------------QHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp CSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 8889999999999999642 1345678888899999999999876
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
...... ++ +. ....+.++.+++.++++++| |++...+..
T Consensus 187 ~~~~~~---------~~---------------------~~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 225 (241)
T 2ex4_A 187 MAQEGV---------IL---------------------DD-VDSSVCRDLDVVRRIICSAG-LSLLAEERQ 225 (241)
T ss_dssp EBSSSE---------EE---------------------ET-TTTEEEEBHHHHHHHHHHTT-CCEEEEEEC
T ss_pred cCCCcc---------ee---------------------cc-cCCcccCCHHHHHHHHHHcC-CeEEEeeec
Confidence 544310 00 00 01234569999999999999 999888775
No 51
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.01 E-value=9.3e-09 Score=98.35 Aligned_cols=152 Identities=18% Similarity=0.129 Sum_probs=97.9
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGR 133 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~ 133 (359)
.+..+|+|+|||+|..+..++ +++ |..+++.-|+| ......-+.+... .--+.-+.++|+ .
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~-~ 230 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALL--------TAH-------EDLSGTVLDLQ-GPASAAHRRFLDTGLSGRAQVVVGSFF-D 230 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECH-HHHHHHHHHHHHTTCTTTEEEEECCTT-S
T ss_pred CCCCEEEEeCCChhHHHHHHH--------HHC-------CCCeEEEecCH-HHHHHHHHhhhhcCcCcCeEEecCCCC-C
Confidence 346899999999998888774 332 45688888994 3433332222110 011233446887 4
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.+|. ++|++++..+||..++ .+...+|+.-++-|+|||++++.
T Consensus 231 ~~p~-~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i~ 273 (332)
T 3i53_A 231 PLPA-GAGGYVLSAVLHDWDD------------------------------------LSAVAILRRCAEAAGSGGVVLVI 273 (332)
T ss_dssp CCCC-SCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCC-CCcEEEEehhhccCCH------------------------------------HHHHHHHHHHHHhcCCCCEEEEE
Confidence 5676 8999999999996432 13456888889999999999997
Q ss_pred eccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 214 LITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
-.-.++..+ ...++..- |+..| ...+|.+|++++++++| |++.++...
T Consensus 274 e~~~~~~~~------~~~~d~~~-----~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~~ 321 (332)
T 3i53_A 274 EAVAGDEHA------GTGMDLRM-----LTYFG-------------GKERSLAELGELAAQAG-LAVRAAHPI 321 (332)
T ss_dssp ECCCC---C------CHHHHHHH-----HHHHS-------------CCCCCHHHHHHHHHHTT-EEEEEEEEC
T ss_pred eecCCCCCc------cHHHHHHH-----HhhCC-------------CCCCCHHHHHHHHHHCC-CEEEEEEEC
Confidence 764443211 11222111 11111 14679999999999999 999887654
No 52
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.01 E-value=2.4e-09 Score=99.43 Aligned_cols=140 Identities=11% Similarity=0.040 Sum_probs=96.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC------------------
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP------------------ 118 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~------------------ 118 (359)
...+|||+|||+|.++..++ ++ ..+|+..|+....-....+....
T Consensus 68 ~~~~vLD~GCG~G~~~~~La--------~~---------G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~ 130 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFA--------DR---------GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKS 130 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHH--------HT---------TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEE
T ss_pred CCCeEEEeCCCCcHHHHHHH--------HC---------CCeEEEEECCHHHHHHHHHhccccccccccccccccccccc
Confidence 35799999999999998884 22 25899999988776665544320
Q ss_pred ---CcccccccCcccccCCCCC-CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHH
Q 018250 119 ---RKYYAAGVPGSFHGRLFPK-STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFE 194 (359)
Q Consensus 119 ---~~~~~~~vpgsfy~~l~p~-~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~ 194 (359)
+--|.. +++.+..+++ +++|+|++..+||++. .. +..
T Consensus 131 ~~~~i~~~~---~D~~~l~~~~~~~FD~V~~~~~l~~l~---~~---------------------------------~~~ 171 (252)
T 2gb4_A 131 SSGSISLYC---CSIFDLPRANIGKFDRIWDRGALVAIN---PG---------------------------------DHD 171 (252)
T ss_dssp TTSSEEEEE---SCTTTGGGGCCCCEEEEEESSSTTTSC---GG---------------------------------GHH
T ss_pred CCCceEEEE---CccccCCcccCCCEEEEEEhhhhhhCC---HH---------------------------------HHH
Confidence 111222 4666655554 8999999999999973 21 334
Q ss_pred HHHHHHHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHh
Q 018250 195 SILNARAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQR 274 (359)
Q Consensus 195 ~fL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~ 274 (359)
.+++.-++-|+|||+|++..+..+.. ...-|.+..+.+|+.+.+..
T Consensus 172 ~~l~~~~~~LkpGG~l~l~~~~~~~~----------------------------------~~~g~~~~~~~~el~~~l~~ 217 (252)
T 2gb4_A 172 RYADIILSLLRKEFQYLVAVLSYDPT----------------------------------KHAGPPFYVPSAELKRLFGT 217 (252)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEECCTT----------------------------------SCCCSSCCCCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCeEEEEEEEecCCc----------------------------------cCCCCCCCCCHHHHHHHhhC
Confidence 57778889999999997665432210 01123455789999999986
Q ss_pred CCceeEeEEEEeec
Q 018250 275 NGHFAMERMQQLDQ 288 (359)
Q Consensus 275 ~G~F~i~~le~~~~ 288 (359)
+ |++..++.++.
T Consensus 218 -~-f~v~~~~~~~~ 229 (252)
T 2gb4_A 218 -K-CSMQCLEEVDA 229 (252)
T ss_dssp -T-EEEEEEEEEEC
T ss_pred -C-eEEEEEecccc
Confidence 5 99999987753
No 53
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.01 E-value=1.5e-10 Score=109.83 Aligned_cols=160 Identities=14% Similarity=0.227 Sum_probs=100.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-----------Ccccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-----------RKYYAAG 125 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-----------~~~~~~~ 125 (359)
...+|+|+|||+|..+..+. +. +..+++..|+........-+.... +--|+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~--------~~--------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~- 96 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWK--------KG--------RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFIT- 96 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHH--------HT--------TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEE-
T ss_pred CCCEEEEECCCCcHHHHHHH--------hc--------CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEE-
Confidence 45799999999999988774 11 235888888877655443332210 011222
Q ss_pred cCcccccCC----C--CCCceeEEEecCccccc-CCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHH
Q 018250 126 VPGSFHGRL----F--PKSTLHVVNSFNAMHWL-SKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILN 198 (359)
Q Consensus 126 vpgsfy~~l----~--p~~s~d~~~S~~alHWL-s~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~ 198 (359)
++..... + +++++|+|+|+.++||+ ... .|...+|+
T Consensus 97 --~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~-----------------------------------~~~~~~l~ 139 (313)
T 3bgv_A 97 --ADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESY-----------------------------------EQADMMLR 139 (313)
T ss_dssp --CCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSH-----------------------------------HHHHHHHH
T ss_pred --ecccccchhhhcccCCCCEEEEEEecchhhccCCH-----------------------------------HHHHHHHH
Confidence 3444332 5 35699999999999996 221 24556888
Q ss_pred HHHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHH--cC-------CCChhhh------------ccCC
Q 018250 199 ARAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAK--MG-------VISEEKA------------RTFN 257 (359)
Q Consensus 199 ~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~--eG-------li~~e~~------------d~f~ 257 (359)
.-++-|+|||++++++++.+. +.+.|...-. -| ..+.+.+ ....
T Consensus 140 ~~~~~LkpgG~li~~~~~~~~---------------l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~ 204 (313)
T 3bgv_A 140 NACERLSPGGYFIGTTPNSFE---------------LIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVD 204 (313)
T ss_dssp HHHTTEEEEEEEEEEEECHHH---------------HHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---C
T ss_pred HHHHHhCCCcEEEEecCChHH---------------HHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCccc
Confidence 889999999999999875421 1112221000 00 0011111 2235
Q ss_pred ccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 258 VPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 258 ~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
.|.|..+.+++.+++++.| |++.....+
T Consensus 205 ~~~~~~~~~~~~~l~~~~G-~~~v~~~~f 232 (313)
T 3bgv_A 205 VPEFLVYFPLLNEMAKKYN-MKLVYKKTF 232 (313)
T ss_dssp CEEECCCHHHHHHHGGGGT-EEEEEEEEH
T ss_pred CcceEEcHHHHHHHHHHcC-cEEEEecCH
Confidence 6778889999999999999 999887765
No 54
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.00 E-value=8.9e-09 Score=100.32 Aligned_cols=153 Identities=17% Similarity=0.148 Sum_probs=99.1
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGR 133 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~ 133 (359)
....+|+|+|||+|..+..++ ++ .|..+++.-|+ .......-+.+... .--+.-+.++|+ .
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~ 263 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVL--------DA-------FPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-E 263 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HH-------CTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-T
T ss_pred ccCcEEEEeCCCccHHHHHHH--------HH-------CCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-C
Confidence 346899999999999888774 33 25678999999 43333332222110 001233346887 5
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.+|. ++|++++..+||+.++ .+...+|+.-++-|+|||++++.
T Consensus 264 ~~p~-~~D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 264 TIPD-GADVYLIKHVLHDWDD------------------------------------DDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp CCCS-SCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCC-CceEEEhhhhhccCCH------------------------------------HHHHHHHHHHHHHcCCCCEEEEE
Confidence 5676 8999999999998542 12335788889999999999997
Q ss_pred eccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEE
Q 018250 214 LITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQ 285 (359)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~ 285 (359)
-...++.... . ....+ +.-|+..| -..+|.+|++++++++| |++.++..
T Consensus 307 e~~~~~~~~~-------~-~~~~d-~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~~~~ 355 (369)
T 3gwz_A 307 DNLIDERPAA-------S-TLFVD-LLLLVLVG-------------GAERSESEFAALLEKSG-LRVERSLP 355 (369)
T ss_dssp EEBCCSSCCH-------H-HHHHH-HHHHHHHS-------------CCCBCHHHHHHHHHTTT-EEEEEEEE
T ss_pred EeccCCCCCC-------c-hhHhh-HHHHhhcC-------------CccCCHHHHHHHHHHCC-CeEEEEEE
Confidence 7655442110 0 11111 11122222 14578999999999999 99988865
No 55
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.00 E-value=5.6e-09 Score=100.79 Aligned_cols=150 Identities=21% Similarity=0.139 Sum_probs=97.3
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC-CCCc--ccccccCccccc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL-PPRK--YYAAGVPGSFHG 132 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l-~~~~--~~~~~vpgsfy~ 132 (359)
+...+|+|+|||+|..+..++ ++ .|..+++.-|+|.. . .+.. .... --+.-+.|+|+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~~~~-~---~~~~~~~~~~~~~v~~~~~d~~- 242 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVL--------RE-------HPGLQGVLLDRAEV-V---ARHRLDAPDVAGRWKVVEGDFL- 242 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHH--------HH-------CTTEEEEEEECHHH-H---TTCCCCCGGGTTSEEEEECCTT-
T ss_pred cCCceEEEECCccCHHHHHHH--------HH-------CCCCEEEEecCHHH-h---hcccccccCCCCCeEEEecCCC-
Confidence 346899999999999998884 33 35678999999641 1 1111 1101 11333457887
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
..+| ++|+++++.+||++++ .+...+|+.-++.|+|||++++
T Consensus 243 ~~~p--~~D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~LkpgG~l~i 284 (348)
T 3lst_A 243 REVP--HADVHVLKRILHNWGD------------------------------------EDSVRILTNCRRVMPAHGRVLV 284 (348)
T ss_dssp TCCC--CCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTCCTTCEEEE
T ss_pred CCCC--CCcEEEEehhccCCCH------------------------------------HHHHHHHHHHHHhcCCCCEEEE
Confidence 5567 9999999999996432 1334688888999999999998
Q ss_pred EeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEE
Q 018250 213 SLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQ 285 (359)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~ 285 (359)
.-...++... .. . ....+. .-++..| -..+|.+|++++++++| |++.++..
T Consensus 285 ~e~~~~~~~~---~~---~-~~~~d~-~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 285 IDAVVPEGND---AH---Q-SKEMDF-MMLAART-------------GQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp EECCBCSSSS---CC---H-HHHHHH-HHHHTTS-------------CCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred EEeccCCCCC---cc---h-hhhcCh-hhhhcCC-------------CcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 7664443211 01 1 111111 1121111 24678999999999999 99988766
No 56
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.99 E-value=7.6e-10 Score=99.97 Aligned_cols=107 Identities=12% Similarity=0.148 Sum_probs=74.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..++ +. ..+++..|+........-+..+....-+.-+.+++.+..+|
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~--------~~---------~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 99 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLC--------PK---------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN 99 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHG--------GG---------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HC---------CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc
Confidence 45799999999999998774 11 24788999877665544433321110122223466555566
Q ss_pred CCceeEEEecC-cccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 137 KSTLHVVNSFN-AMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 137 ~~s~d~~~S~~-alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
+++|+|+++. ++||+... .|...+|+.-++-|+|||++++.+.
T Consensus 100 -~~fD~v~~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 100 -RKFDLITCCLDSTNYIIDS-----------------------------------DDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp -CCEEEEEECTTGGGGCCSH-----------------------------------HHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -CCceEEEEcCccccccCCH-----------------------------------HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 8999999998 99996321 2566788888999999999999876
Q ss_pred c
Q 018250 216 T 216 (359)
Q Consensus 216 g 216 (359)
.
T Consensus 144 ~ 144 (246)
T 1y8c_A 144 S 144 (246)
T ss_dssp C
T ss_pred C
Confidence 4
No 57
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.99 E-value=8.7e-09 Score=99.17 Aligned_cols=153 Identities=12% Similarity=0.091 Sum_probs=97.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC--CcccccccCcccccCC-
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP--RKYYAAGVPGSFHGRL- 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~--~~~~~~~vpgsfy~~l- 134 (359)
..+|+|+|||+|..+..++ ++ .|..+++.-|+|. .....-+.+.. -.--+.-+.++|.+..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~~~-~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVL--------RR-------HPQLTGQIWDLPT-TRDAARKTIHAHDLGGRVEFFEKNLLDARN 243 (352)
T ss_dssp CCEEEEETCTTCHHHHHHH--------HH-------CTTCEEEEEECGG-GHHHHHHHHHHTTCGGGEEEEECCTTCGGG
T ss_pred CCEEEEeCCCcCHHHHHHH--------Hh-------CCCCeEEEEECHH-HHHHHHHHHHhcCCCCceEEEeCCcccCcc
Confidence 6899999999999988874 33 3567899999954 33322222211 0011333456776554
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
++++++|+++++.++|++++ .+...+|+.-++-|+|||++++.-
T Consensus 244 ~~~~~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 244 FEGGAADVVMLNDCLHYFDA------------------------------------REAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp GTTCCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCccEEEEecccccCCH------------------------------------HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 35677999999999997532 134568888899999999999887
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeE
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMER 282 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~ 282 (359)
...++.... ..+..+.+... ++..+ -...++.+|++++++++| |++.+
T Consensus 288 ~~~~~~~~~------~~~~~~~~~~~-~~~~~------------~~~~~t~~e~~~ll~~aG-f~~~~ 335 (352)
T 3mcz_A 288 MTMNDDRVT------PALSADFSLHM-MVNTN------------HGELHPTPWIAGVVRDAG-LAVGE 335 (352)
T ss_dssp ECCCTTSSS------SHHHHHHHHHH-HHHST------------TCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred eccCCCCCC------CchHHHhhHHH-HhhCC------------CCCcCCHHHHHHHHHHCC-Cceee
Confidence 655442110 11222222211 11110 013578999999999999 99877
No 58
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.99 E-value=6.1e-09 Score=97.73 Aligned_cols=147 Identities=15% Similarity=0.170 Sum_probs=93.9
Q ss_pred cceEEEeecCCC---CcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-Cc-ccccccCcccc
Q 018250 57 YTVRIADLGCSV---GPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RK-YYAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~---G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~-~~~~~vpgsfy 131 (359)
+..+|+|+|||+ |..+..+ .+. .|..+|+..|+...+-...-+.+.. .. -|+. +++.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~--------~~~-------~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~---~D~~ 138 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVA--------QSV-------NPDARVVYVDIDPMVLTHGRALLAKDPNTAVFT---ADVR 138 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHH--------HHH-------CTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEE---CCTT
T ss_pred CCCEEEEECCCCCCCChHHHHH--------HHh-------CCCCEEEEEECChHHHHHHHHhcCCCCCeEEEE---eeCC
Confidence 347999999999 9654333 222 2457899999976555443333322 11 2333 4554
Q ss_pred c-----------CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018250 132 G-----------RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNAR 200 (359)
Q Consensus 132 ~-----------~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~R 200 (359)
+ ..+|.+++|+++++.+|||+++- +...+|+.-
T Consensus 139 ~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~------------------------------------~~~~~l~~~ 182 (274)
T 2qe6_A 139 DPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD------------------------------------VVDRVVGAY 182 (274)
T ss_dssp CHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT------------------------------------THHHHHHHH
T ss_pred CchhhhccchhhccCCCCCCEEEEEechhhhCCcH------------------------------------HHHHHHHHH
Confidence 2 23555689999999999997641 234577778
Q ss_pred HHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeE
Q 018250 201 AEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAM 280 (359)
Q Consensus 201 a~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i 280 (359)
++-|+|||+|+++.+..+. + ..+..+.+.+.. . ..|+++++.+|+.+.+ .| |++
T Consensus 183 ~~~L~pGG~l~i~~~~~~~--~-------~~~~~~~~~~~~---~-----------~~~~~~~s~~ei~~~l--~G-~~l 236 (274)
T 2qe6_A 183 RDALAPGSYLFMTSLVDTG--L-------PAQQKLARITRE---N-----------LGEGWARTPEEIERQF--GD-FEL 236 (274)
T ss_dssp HHHSCTTCEEEEEEEBCSS--C-------HHHHHHHHHHHH---H-----------HSCCCCBCHHHHHHTT--TT-CEE
T ss_pred HHhCCCCcEEEEEEecCcc--h-------HHHHHHHHHHHh---c-----------CCCCccCCHHHHHHHh--CC-CeE
Confidence 8999999999999987542 1 011222222221 1 1266789999999999 47 987
Q ss_pred eEE
Q 018250 281 ERM 283 (359)
Q Consensus 281 ~~l 283 (359)
...
T Consensus 237 ~~~ 239 (274)
T 2qe6_A 237 VEP 239 (274)
T ss_dssp CTT
T ss_pred ccC
Confidence 653
No 59
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.98 E-value=2e-08 Score=95.97 Aligned_cols=151 Identities=19% Similarity=0.164 Sum_probs=97.8
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccCCCC
Q 018250 59 VRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 59 ~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~l~p 136 (359)
.+|+|+|||+|..+..++ ++ .|..+++..|+ .......-+.+... .--+.-+.++|.+ .+|
T Consensus 169 ~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 231 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAIL--------QA-------EPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP 231 (334)
T ss_dssp CEEEEETCTTCHHHHHHH--------HH-------CTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC
T ss_pred CEEEEeCCCchHHHHHHH--------HH-------CCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC
Confidence 899999999999888774 33 24578999999 55655444433210 0012334468877 466
Q ss_pred CCceeEEEecCccc-ccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 137 KSTLHVVNSFNAMH-WLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 137 ~~s~d~~~S~~alH-WLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
+++|+++++.++| | + . .+...+|+.-++-|+|||++++.-.
T Consensus 232 -~~~D~v~~~~vl~~~-~---~---------------------------------~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDL-D---E---------------------------------AASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp -SSCSEEEEESCGGGC-C---H---------------------------------HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred -CCCCEEEEchhccCC-C---H---------------------------------HHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 6899999999998 5 2 1 1334578888899999999999876
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
..++... . .+..+.+. .-+...| -..++.+|++++++++| |++.++...
T Consensus 274 ~~~~~~~---~----~~~~~~~~-~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~~ 322 (334)
T 2ip2_A 274 TISASEP---S----PMSVLWDV-HLFMACA-------------GRHRTTEEVVDLLGRGG-FAVERIVDL 322 (334)
T ss_dssp CBCSSSC---C----HHHHHHHH-HHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred ccCCCCC---c----chhHHhhh-HhHhhCC-------------CcCCCHHHHHHHHHHCC-CceeEEEEC
Confidence 5443211 0 11111111 1111111 13468999999999999 998877654
No 60
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.98 E-value=6.3e-10 Score=109.82 Aligned_cols=145 Identities=14% Similarity=0.163 Sum_probs=97.7
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHh-CCC-CcccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRT-LPP-RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~-l~~-~~~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..+..+. ++ ..+++..|+..+.....-+. ++. ...|..+ +.....
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~--------~~---------g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~---~~~~l~ 166 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQ--------EA---------GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKA---TADDVR 166 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHH--------HT---------TCEEEEECCCHHHHHHHHTTTCCEECSCCSHH---HHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hc---------CCcEEEECCCHHHHHHHHHcCCCcceeeechh---hHhhcc
Confidence 45799999999999888774 22 24899999987665443332 111 1122221 121223
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
++++++|+|+|+.++||+. |...||+.-++-|+|||+|++..
T Consensus 167 ~~~~~fD~I~~~~vl~h~~--------------------------------------d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIP--------------------------------------YVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp HHHCCEEEEEEESCGGGCT--------------------------------------THHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCEEEEEECChHHhcC--------------------------------------CHHHHHHHHHHHcCCCeEEEEEe
Confidence 6789999999999999964 33458888899999999999987
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhcc-CCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKART-FNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~-f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
....+ + ... ..++. +.-.+++++.++++.++++.| |++..++.+.
T Consensus 209 ~~~~~-----------~-----------~~~-----~~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~~~ 254 (416)
T 4e2x_A 209 PYLGD-----------I-----------VAK-----TSFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQRLP 254 (416)
T ss_dssp ECHHH-----------H-----------HHH-----TCGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred CChHH-----------h-----------hhh-----cchhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEEcc
Confidence 53211 0 000 11122 223456789999999999999 9999888863
No 61
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.96 E-value=2.4e-08 Score=97.33 Aligned_cols=155 Identities=16% Similarity=0.092 Sum_probs=97.8
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~ 135 (359)
.+..+|+|+|||+|..+..++ ++ .|..+++..|+|. ........ --+.-+.|+|++ .+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~~~-----~~~~a~~~-~~v~~~~~d~~~-~~ 259 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIV--------AK-------YPSINAINFDLPH-----VIQDAPAF-SGVEHLGGDMFD-GV 259 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HH-------CTTCEEEEEECHH-----HHTTCCCC-TTEEEEECCTTT-CC
T ss_pred cCCCEEEEeCCCcCHHHHHHH--------Hh-------CCCCEEEEEehHH-----HHHhhhhc-CCCEEEecCCCC-CC
Confidence 346899999999999998884 44 3567899999953 22211111 112334578886 67
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|++ |+++++.+||+++. .+...+|+.-++-|+|||++++.-.
T Consensus 260 p~~--D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 260 PKG--DAIFIKWICHDWSD------------------------------------EHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp CCC--SEEEEESCGGGBCH------------------------------------HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCC--CEEEEechhhcCCH------------------------------------HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 865 99999999996431 1445688888999999999998765
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
-.++..... ........ .-+.-|+. ...-..+|.+|++++++++| |++.++....
T Consensus 302 ~~~~~~~~~---~~~~~~~~-~d~~~~~~------------~~~g~~rt~~e~~~ll~~AG-F~~v~~~~~~ 356 (368)
T 3reo_A 302 ILPPSPDPS---IATKVVIH-TDALMLAY------------NPGGKERTEKEFQALAMASG-FRGFKVASCA 356 (368)
T ss_dssp CCCSSCCCC---HHHHHHHH-HHHHHHHH------------SSBCCCCCHHHHHHHHHHTT-CCEEEEEEEE
T ss_pred ccCCCCCCc---hhhhHHHh-hhHHHHhh------------cCCCccCCHHHHHHHHHHCC-CeeeEEEEeC
Confidence 444321100 00000011 11111211 00114578999999999999 9988776653
No 62
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.96 E-value=2.9e-09 Score=96.25 Aligned_cols=168 Identities=18% Similarity=0.149 Sum_probs=99.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+. +. ...+++..|+........-+...... +..+.+++.+..+|
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~--------~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~d~~~~~~~ 104 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAH--------EH--------GASYVLGLDLSEKMLARARAAGPDTG--ITYERADLDKLHLP 104 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT--------TCSEEEEEESCHHHHHHHHHTSCSSS--EEEEECCGGGCCCC
T ss_pred CCCEEEEEcCcCCHHHHHHH--------HC--------CCCeEEEEcCCHHHHHHHHHhcccCC--ceEEEcChhhccCC
Confidence 45799999999999888774 22 11288999987655554444433221 11223466665678
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+++.++||+.. ...+|+.-++-|+|||++++....
T Consensus 105 ~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYVED--------------------------------------VARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp TTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCceEEEEeccccccch--------------------------------------HHHHHHHHHHhcCcCcEEEEEeCC
Confidence 999999999999999642 234677788999999999998753
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhh----hccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEK----ARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~----~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
................. ...| ...+...... +-.-....|.++.+|+.++++++| |++..++..
T Consensus 147 ~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~~~~ 214 (243)
T 3bkw_A 147 PIYMAPARPGWAIDAEG--RRTW---PIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSG-FAIEHVEEF 214 (243)
T ss_dssp HHHHCCSSCSCEECTTS--CEEE---EECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTT-CEEEEEEEC
T ss_pred cccccCcCcceeecCCC--ceEE---eecccccccceeeeeccCceEEEeccHHHHHHHHHHcC-CEeeeeccC
Confidence 21000000000000000 0000 0000000000 000023457789999999999999 999888765
No 63
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.95 E-value=8.4e-09 Score=94.87 Aligned_cols=105 Identities=14% Similarity=0.145 Sum_probs=74.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+. +. ..+++..|+........-+..+ +--|+. +++.+..+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~~~~~a~~~~~-~~~~~~---~d~~~~~~- 107 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLA--------DS---------FGTVEGLELSADMLAIARRRNP-DAVLHH---GDMRDFSL- 107 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHT--------TT---------SSEEEEEESCHHHHHHHHHHCT-TSEEEE---CCTTTCCC-
T ss_pred CCCcEEEeCCcCCHHHHHHH--------Hc---------CCeEEEEECCHHHHHHHHhhCC-CCEEEE---CChHHCCc-
Confidence 45799999999999988773 11 2378899987655554444433 111222 35544334
Q ss_pred CCceeEEEecC-cccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 137 KSTLHVVNSFN-AMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 137 ~~s~d~~~S~~-alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
++++|+|+|+. ++||+.. ..|+..+|+.-++-|+|||++++...
T Consensus 108 ~~~fD~v~~~~~~l~~~~~-----------------------------------~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 108 GRRFSAVTCMFSSIGHLAG-----------------------------------QAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp SCCEEEEEECTTGGGGSCH-----------------------------------HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred cCCcCEEEEcCchhhhcCC-----------------------------------HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 78999999998 9999642 12566788889999999999999865
Q ss_pred cCC
Q 018250 216 TGP 218 (359)
Q Consensus 216 g~~ 218 (359)
..+
T Consensus 153 ~~~ 155 (263)
T 3pfg_A 153 WFP 155 (263)
T ss_dssp CCT
T ss_pred cCh
Confidence 443
No 64
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.94 E-value=8.8e-09 Score=98.11 Aligned_cols=157 Identities=16% Similarity=0.102 Sum_probs=99.8
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~l 134 (359)
+..+|+|+|||+|..+..++ +.+ |..+++..|++ ......-+.+... .--+.-+.+++.+..
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 228 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVA--------QHN-------PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVD 228 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHH--------HHC-------TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSC
T ss_pred CCCEEEEECCCcCHHHHHHH--------HHC-------CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCC
Confidence 45799999999999888774 332 45799999998 5544433332110 001222345776655
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+|++ +|+++++..+|.+++ .+...+|+.-++-|+|||++++.-
T Consensus 229 ~~~~-~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 229 YGND-YDLVLLPNFLHHFDV------------------------------------ATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp CCSC-EEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCC-CcEEEEcchhccCCH------------------------------------HHHHHHHHHHHHhCCCCcEEEEEe
Confidence 6655 999999999997431 144567888889999999998887
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
...++.... ..+..+.+.+ -+... .....++.+|++++++++| |++.++...
T Consensus 272 ~~~~~~~~~------~~~~~~~~~~-~~~~~------------~~~~~~t~~~~~~ll~~aG-f~~~~~~~~ 323 (335)
T 2r3s_A 272 FIPNSDRIT------PPDAAAFSLV-MLATT------------PNGDAYTFAEYESMFSNAG-FSHSQLHSL 323 (335)
T ss_dssp CCCCTTSSC------SHHHHHHHHH-HHHHS------------SSCCCCCHHHHHHHHHHTT-CSEEEEECC
T ss_pred ecCCCCcCC------chHHHHHHHH-HHeeC------------CCCCcCCHHHHHHHHHHCC-CCeeeEEEC
Confidence 665432110 1112121111 11111 0125679999999999999 998777554
No 65
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.94 E-value=2e-09 Score=94.97 Aligned_cols=143 Identities=15% Similarity=0.118 Sum_probs=96.5
Q ss_pred EEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCCCc
Q 018250 60 RIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPKST 139 (359)
Q Consensus 60 ~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~~s 139 (359)
+|+|+|||+|..+..+. +. ..+++..|+........-+.......-+.-+.+++.+..+|+++
T Consensus 32 ~vLdiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~ 94 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLA--------SL---------GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADA 94 (202)
T ss_dssp EEEECCCSCTHHHHHHH--------TT---------TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTT
T ss_pred CEEEECCCCCHhHHHHH--------hC---------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCC
Confidence 99999999999988774 11 24888999876554443333211000112223455555578899
Q ss_pred eeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccCCC
Q 018250 140 LHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITGPS 219 (359)
Q Consensus 140 ~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~ 219 (359)
+|+|+++. .|| +. .|...+|+.-.+-|+|||++++......+
T Consensus 95 fD~v~~~~-~~~----~~---------------------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 95 WEGIVSIF-CHL----PS---------------------------------SLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp CSEEEEEC-CCC----CH---------------------------------HHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred ccEEEEEh-hcC----CH---------------------------------HHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 99999964 344 11 24556888888999999999999987654
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeecC
Q 018250 220 GIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQP 289 (359)
Q Consensus 220 ~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~~ 289 (359)
... ..| ....+.++++.+|++++++ | |++..++....+
T Consensus 137 ~~~---------------------~~~--------~~~~~~~~~~~~~l~~~l~--G-f~v~~~~~~~~~ 174 (202)
T 2kw5_A 137 LQY---------------------NTG--------GPKDLDLLPKLETLQSELP--S-LNWLIANNLERN 174 (202)
T ss_dssp GGG---------------------TSC--------CSSSGGGCCCHHHHHHHCS--S-SCEEEEEEEEEE
T ss_pred ccC---------------------CCC--------CCCcceeecCHHHHHHHhc--C-ceEEEEEEEEee
Confidence 100 001 1224568999999999999 7 999999987654
No 66
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.94 E-value=4.1e-09 Score=102.48 Aligned_cols=158 Identities=17% Similarity=0.143 Sum_probs=99.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccC-
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGR- 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~- 133 (359)
+..+|+|+|||+|..+..++ +++ |..+++..|+| ......-+.+.... --+.-+.|+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 242 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCV--------QYN-------KEVEVTIVDLP-QQLEMMRKQTAGLSGSERIHGHGANLLDRD 242 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHH--------HHS-------TTCEEEEEECH-HHHHHHHHHHTTCTTGGGEEEEECCCCSSS
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HhC-------CCCEEEEEeCH-HHHHHHHHHHHhcCcccceEEEEccccccC
Confidence 45799999999999998884 332 56799999994 34333333332211 1233345788765
Q ss_pred -CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 134 -LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 134 -l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
.+| +++|+++++.+||.++. .+...+|+.-++-|+|||++++
T Consensus 243 ~~~p-~~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i 285 (363)
T 3dp7_A 243 VPFP-TGFDAVWMSQFLDCFSE------------------------------------EEVISILTRVAQSIGKDSKVYI 285 (363)
T ss_dssp CCCC-CCCSEEEEESCSTTSCH------------------------------------HHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCC-CCcCEEEEechhhhCCH------------------------------------HHHHHHHHHHHHhcCCCcEEEE
Confidence 467 89999999999985331 1445688888999999999988
Q ss_pred EeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEE
Q 018250 213 SLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQ 284 (359)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le 284 (359)
.-...++... ....+. +......+... .......+|.+|++++++++| |++.++.
T Consensus 286 ~e~~~~~~~~-----~~~~~~-~~~~~~~~~~~----------~~~~~~~~t~~e~~~ll~~AG-f~~v~~~ 340 (363)
T 3dp7_A 286 METLWDRQRY-----ETASYC-LTQISLYFTAM----------ANGNSKMFHSDDLIRCIENAG-LEVEEIQ 340 (363)
T ss_dssp EECCTTSCSS-----HHHHHH-HHHHHHHHHHS----------SCSSCCSCCHHHHHHHHHTTT-EEESCCC
T ss_pred EeeccCCccc-----cchhhH-HHHhhhhHHhh----------hCCCCcccCHHHHHHHHHHcC-CeEEEEE
Confidence 7654433211 001111 11111111100 011224579999999999999 9987664
No 67
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.94 E-value=5.9e-09 Score=102.17 Aligned_cols=150 Identities=17% Similarity=0.176 Sum_probs=95.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC-----------C-CCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL-----------P-PRKYYAA 124 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l-----------~-~~~~~~~ 124 (359)
...+|||+|||+|..++.++ +.+ .|..+|+..|+........-+.+ . .+--|..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la--------~~~------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~ 148 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLAS--------KLV------GEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLK 148 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH------TTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEE
T ss_pred CCCEEEEecCccCHHHHHHH--------HHh------CCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEE
Confidence 35799999999999998874 332 13468999999775554443321 1 1111232
Q ss_pred ccCcccccC------CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHH
Q 018250 125 GVPGSFHGR------LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILN 198 (359)
Q Consensus 125 ~vpgsfy~~------l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~ 198 (359)
+++.+. .+|++++|+|+|+.++||+.+ +..+|+
T Consensus 149 ---~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d--------------------------------------~~~~l~ 187 (383)
T 4fsd_A 149 ---GFIENLATAEPEGVPDSSVDIVISNCVCNLSTN--------------------------------------KLALFK 187 (383)
T ss_dssp ---SCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHH
T ss_pred ---ccHHHhhhcccCCCCCCCEEEEEEccchhcCCC--------------------------------------HHHHHH
Confidence 344443 689999999999999999643 234777
Q ss_pred HHHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCce
Q 018250 199 ARAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHF 278 (359)
Q Consensus 199 ~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F 278 (359)
.-++-|+|||+|+++.+....... +.+.. ...+.... .....+.+++.++++++| |
T Consensus 188 ~~~r~LkpgG~l~i~~~~~~~~~~----------~~~~~-~~~~~~~~------------~~~~~~~~~~~~ll~~aG-F 243 (383)
T 4fsd_A 188 EIHRVLRDGGELYFSDVYADRRLS----------EAAQQ-DPILYGEC------------LGGALYLEDFRRLVAEAG-F 243 (383)
T ss_dssp HHHHHEEEEEEEEEEEEEESSCCC----------HHHHH-CHHHHHTT------------CTTCCBHHHHHHHHHHTT-C
T ss_pred HHHHHcCCCCEEEEEEeccccccC----------HhHhh-hHHHhhcc------------cccCCCHHHHHHHHHHCC-C
Confidence 888999999999998776553211 00000 00111111 013456789999999998 8
Q ss_pred eEeEEEE
Q 018250 279 AMERMQQ 285 (359)
Q Consensus 279 ~i~~le~ 285 (359)
++.++..
T Consensus 244 ~~v~~~~ 250 (383)
T 4fsd_A 244 RDVRLVS 250 (383)
T ss_dssp CCEEEEE
T ss_pred ceEEEEe
Confidence 7554443
No 68
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.94 E-value=8.7e-09 Score=92.07 Aligned_cols=154 Identities=13% Similarity=0.055 Sum_probs=95.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc------cccccCcccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY------YAAGVPGSFH 131 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~------~~~~vpgsfy 131 (359)
..+|+|+|||+|..+..+. +. .|..+++..|+........-+.+..... -+.-+-+++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~--------~~-------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLL--------KD-------KSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp CCEEEEETCTTCHHHHHHH--------TS-------TTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred CCEEEEecCCCCHHHHHHH--------hc-------CCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 5699999999999988774 22 2446899999987665555444331000 1111223554
Q ss_pred cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 132 GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 132 ~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
...++++++|+|+|+.++||+.. .++..+|+.-++-|+|||+++
T Consensus 95 ~~~~~~~~fD~V~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~~i 138 (219)
T 3jwg_A 95 YRDKRFSGYDAATVIEVIEHLDE------------------------------------NRLQAFEKVLFEFTRPQTVIV 138 (219)
T ss_dssp SCCGGGTTCSEEEEESCGGGCCH------------------------------------HHHHHHHHHHHTTTCCSEEEE
T ss_pred ccccccCCCCEEEEHHHHHhCCH------------------------------------HHHHHHHHHHHHhhCCCEEEE
Confidence 55567899999999999999632 145568888899999999665
Q ss_pred EEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHH----HHHHhCCceeEeEEEEee
Q 018250 212 FSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELE----SLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 212 l~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~----~~i~~~G~F~i~~le~~~ 287 (359)
.+....-+... . .+. .+.. ......++.+.+|++ .++++.| |+++....-.
T Consensus 139 ~~~~~~~~~~~----------~-------~~~-~~~~------~~~~~~~~~~~~~l~~~~~~l~~~~G-f~v~~~~~g~ 193 (219)
T 3jwg_A 139 STPNKEYNFHY----------G-------NLF-EGNL------RHRDHRFEWTRKEFQTWAVKVAEKYG-YSVRFLQIGE 193 (219)
T ss_dssp EEEBGGGGGCC----------C-------CT------------GGGCCTTSBCHHHHHHHHHHHHHHHT-EEEEEEEESC
T ss_pred Eccchhhhhhh----------c-------ccC-cccc------cccCceeeecHHHHHHHHHHHHHHCC-cEEEEEecCC
Confidence 55432221100 0 000 0000 011123556899999 7778889 9987765543
No 69
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.94 E-value=1.2e-09 Score=102.94 Aligned_cols=170 Identities=14% Similarity=0.175 Sum_probs=101.5
Q ss_pred eEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc----ccccccCcccccCC
Q 018250 59 VRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK----YYAAGVPGSFHGRL 134 (359)
Q Consensus 59 ~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~----~~~~~vpgsfy~~l 134 (359)
.+|+|+|||+|..+..+++ . ..+|+..|+........-+...... .-+.-+.+++.+..
T Consensus 84 ~~vLDlGcG~G~~~~~l~~--------~---------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLD--------L---------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA 146 (299)
T ss_dssp SCEEEETCTTTTTHHHHHT--------T---------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC
T ss_pred CcEEEEeccCCHHHHHHHH--------c---------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC
Confidence 3999999999999998841 1 2478899987766554444332211 01122234665533
Q ss_pred CCCCceeEEE-ecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 135 FPKSTLHVVN-SFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 135 ~p~~s~d~~~-S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
+ ++++|+|+ ++.++||++. .|...+|+.-++-|+|||+|++.
T Consensus 147 ~-~~~fD~v~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 147 L-DKRFGTVVISSGSINELDE------------------------------------ADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp C-SCCEEEEEECHHHHTTSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c-CCCcCEEEECCcccccCCH------------------------------------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 4 78999888 5678898541 25567888889999999999999
Q ss_pred eccCCCCC--CCCCcchhHHHHH-HHHHHHHHHHcCCC---------------ChhhhccCCccccCCCHHHHHHHHHhC
Q 018250 214 LITGPSGI--PFADTVQGATYNF-LGSCLWDLAKMGVI---------------SEEKARTFNVPAYFPYVEELESLIQRN 275 (359)
Q Consensus 214 ~~g~~~~~--~~~~~~~~~~~~~-l~~al~~lv~eGli---------------~~e~~d~f~~P~y~ps~~E~~~~i~~~ 275 (359)
+....... +.... ..+.. -...+ ....... ....+..+....++.+.+|++.+++++
T Consensus 190 ~~~~~~~~~~~~~~~---~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~a 264 (299)
T 3g2m_A 190 LAMSEAAESEPLERK---QELPGRSGRRY--VLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRS 264 (299)
T ss_dssp EECCHHHHSCCCCC------------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHT
T ss_pred eecCccccccchhcc---ceeecCCCcEE--EEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHC
Confidence 98665310 00000 00000 00000 0000000 000011233455678999999999999
Q ss_pred CceeEeEEEEeec
Q 018250 276 GHFAMERMQQLDQ 288 (359)
Q Consensus 276 G~F~i~~le~~~~ 288 (359)
| |++..++.+..
T Consensus 265 G-F~v~~~~~~~~ 276 (299)
T 3g2m_A 265 G-FDVIAQTPFAS 276 (299)
T ss_dssp T-CEEEEEEEECT
T ss_pred C-CEEEEEEecCC
Confidence 9 99999998853
No 70
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.93 E-value=9.7e-09 Score=91.75 Aligned_cols=151 Identities=13% Similarity=0.044 Sum_probs=93.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc------cccccCcccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY------YAAGVPGSFH 131 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~------~~~~vpgsfy 131 (359)
..+|+|+|||+|..+..+. +. .+..+++..|+........-+.+..... -+.-+.+++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~--------~~-------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILL--------KD-------SFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp CCEEEEETCTTCHHHHHHH--------HC-------TTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred CCEEEEeCCCCCHHHHHHH--------hh-------CCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 4699999999999998874 22 2346899999987666655554432100 1111223554
Q ss_pred cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 132 GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 132 ~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
...++++++|+|+|+.++||+.. .++..+|+.-++-|+|||+++
T Consensus 95 ~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~li 138 (217)
T 3jwh_A 95 YQDKRFHGYDAATVIEVIEHLDL------------------------------------SRLGAFERVLFEFAQPKIVIV 138 (217)
T ss_dssp SCCGGGCSCSEEEEESCGGGCCH------------------------------------HHHHHHHHHHHTTTCCSEEEE
T ss_pred cccccCCCcCEEeeHHHHHcCCH------------------------------------HHHHHHHHHHHHHcCCCEEEE
Confidence 44466789999999999999732 145568888899999999766
Q ss_pred EEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHH----HHHHhCCceeEeEEE
Q 018250 212 FSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELE----SLIQRNGHFAMERMQ 284 (359)
Q Consensus 212 l~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~----~~i~~~G~F~i~~le 284 (359)
++....- . ..|..+.. +. .......++.+.+|++ .++++.| |+++...
T Consensus 139 ~~~~~~~--------------~---~~~~~~~~-~~------~~~~~~~~~~~~~~l~~~~~~~~~~~G-f~v~~~~ 190 (217)
T 3jwh_A 139 TTPNIEY--------------N---VKFANLPA-GK------LRHKDHRFEWTRSQFQNWANKITERFA-YNVQFQP 190 (217)
T ss_dssp EEEBHHH--------------H---HHTC------------------CCSCBCHHHHHHHHHHHHHHSS-EEEEECC
T ss_pred EccCccc--------------c---hhhccccc-cc------ccccccccccCHHHHHHHHHHHHHHcC-ceEEEEe
Confidence 6543110 0 01111100 00 0011223557999999 7888899 9885543
No 71
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.90 E-value=4.2e-08 Score=95.54 Aligned_cols=153 Identities=16% Similarity=0.135 Sum_probs=98.0
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~ 135 (359)
.+..+|+|+|||+|..+..++ ++ .|..+++..|+|. ....-... --+.-+.|+|++ .+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~~~-----~~~~a~~~-~~v~~~~~D~~~-~~ 257 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIA--------AH-------YPTIKGVNFDLPH-----VISEAPQF-PGVTHVGGDMFK-EV 257 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHH--------HH-------CTTCEEEEEECHH-----HHTTCCCC-TTEEEEECCTTT-CC
T ss_pred cCCCEEEEeCCCCCHHHHHHH--------HH-------CCCCeEEEecCHH-----HHHhhhhc-CCeEEEeCCcCC-CC
Confidence 346899999999999998884 44 3567899999953 22211111 113334578887 77
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|++ |+++++++||..+. .|...+|+.-++-|+|||++++.-.
T Consensus 258 p~~--D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 258 PSG--DTILMKWILHDWSD------------------------------------QHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp CCC--SEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCC--CEEEehHHhccCCH------------------------------------HHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 865 99999999985321 2455688888999999999998765
Q ss_pred cCCCCCCCCCcchhHHHH-HHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 216 TGPSGIPFADTVQGATYN-FLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~-~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
..++.... ..... ....-+.-|+. ...-..+|.+|++++++++| |++.++...
T Consensus 300 ~~~~~~~~-----~~~~~~~~~~d~~m~~~------------~~~g~~rt~~e~~~ll~~AG-F~~v~~~~~ 353 (364)
T 3p9c_A 300 ILPVNPEA-----NPSSQGVFHVDMIMLAH------------NPGGRERYEREFQALARGAG-FTGVKSTYI 353 (364)
T ss_dssp CBCSSCCS-----SHHHHHHHHHHHHHHHH------------CSSCCCCBHHHHHHHHHHTT-CCEEEEEEE
T ss_pred ccCCCCCc-----chhhhhHHHhHHHHHhc------------ccCCccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 44432111 00111 01111111211 00114578999999999999 999887765
No 72
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.90 E-value=2.1e-08 Score=88.90 Aligned_cols=135 Identities=21% Similarity=0.237 Sum_probs=88.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCc-eEEecCCCCCchHHHHHhCCCCcccccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDF-QVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~-~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|..+..+ .. +++..|+........-+..+. --++ .+++.+..+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l--------------------~~~~v~~vD~s~~~~~~a~~~~~~-~~~~---~~d~~~~~~ 91 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL--------------------PYPQKVGVEPSEAMLAVGRRRAPE-ATWV---RAWGEALPF 91 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC--------------------CCSEEEEECCCHHHHHHHHHHCTT-SEEE---CCCTTSCCS
T ss_pred CCCeEEEECCCCCHhHHhC--------------------CCCeEEEEeCCHHHHHHHHHhCCC-cEEE---EcccccCCC
Confidence 4579999999999877644 13 788889877555544443321 1122 235555557
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|++++|+|+++.++||+.+ ...+|+.-++-|+|||+++++.+
T Consensus 92 ~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 92 PGESFDVVLLFTTLEFVED--------------------------------------VERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp CSSCEEEEEEESCTTTCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcEEEEEEcChhhhcCC--------------------------------------HHHHHHHHHHHcCCCCEEEEEec
Confidence 8999999999999999642 22467777899999999999998
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCC
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNG 276 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G 276 (359)
.+.+ .+..+ +..+...|. .......+.|.+|++++++ |
T Consensus 134 ~~~~-----------~~~~~---~~~~~~~~~-------~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 134 EALS-----------PWAAL---YRRLGEKGV-------LPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp CTTS-----------HHHHH---HHHHHHTTC-------TTGGGCCCCCHHHHHHHHC--S
T ss_pred CCcC-----------cHHHH---HHHHhhccC-------ccccccccCCHHHHHHHhc--C
Confidence 6553 12211 111112221 1112245689999999998 7
No 73
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.89 E-value=3.6e-08 Score=95.65 Aligned_cols=155 Identities=16% Similarity=0.081 Sum_probs=98.4
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-CcccccccCcccccCC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~~~~~~vpgsfy~~l 134 (359)
+...+|+|+|||+|..++.++ ++ .|..+++.-|+|. .-...-+.++. ..--+.-++|+|++..
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~--------~~-------~p~~~~~~~dlp~-v~~~a~~~~~~~~~~rv~~~~gD~~~~~ 241 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECM--------SL-------YPGCKITVFDIPE-VVWTAKQHFSFQEEEQIDFQEGDFFKDP 241 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHH--------HH-------CSSCEEEEEECHH-HHHHHHHHSCC--CCSEEEEESCTTTSC
T ss_pred ccCCeEEeeCCCCCHHHHHHH--------Hh-------CCCceeEeccCHH-HHHHHHHhhhhcccCceeeecCccccCC
Confidence 345689999999999888874 44 4678999999985 22222222222 1112444578999876
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+| ..|+++....||-.+ + .+-..+|+.-++.|+|||++++.=
T Consensus 242 ~~--~~D~~~~~~vlh~~~---d---------------------------------~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 242 LP--EADLYILARVLHDWA---D---------------------------------GKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp CC--CCSEEEEESSGGGSC---H---------------------------------HHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CC--CceEEEeeeecccCC---H---------------------------------HHHHHHHHHHHhhCCCCCEEEEEE
Confidence 66 469999999999422 1 133457888899999999998876
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEE
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQ 285 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~ 285 (359)
.-.++... ......+-+ +.-|+.-| --.+|.+|++++++++| |++.++..
T Consensus 284 ~~~~~~~~------~~~~~~~~d-l~ml~~~~-------------g~ert~~e~~~ll~~AG-f~~v~v~~ 333 (353)
T 4a6d_A 284 SLLDEDRR------GPLLTQLYS-LNMLVQTE-------------GQERTPTHYHMLLSSAG-FRDFQFKK 333 (353)
T ss_dssp CCCCTTSC------CCHHHHHHH-HHHHHSSS-------------CCCCCHHHHHHHHHHHT-CEEEEEEC
T ss_pred eeeCCCCC------CCHHHHHHH-HHHHHhCC-------------CcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 54332111 011111111 11122111 13479999999999999 99877654
No 74
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.88 E-value=1.4e-08 Score=86.97 Aligned_cols=132 Identities=10% Similarity=0.032 Sum_probs=92.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+. +.. .+++..|+........-+..+ +--+.. ++ ..+|
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~--------~~~---------~~v~~vD~s~~~~~~a~~~~~-~v~~~~---~d---~~~~ 72 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLL--------EFA---------TKLYCIDINVIALKEVKEKFD-SVITLS---DP---KEIP 72 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHH--------TTE---------EEEEEECSCHHHHHHHHHHCT-TSEEES---SG---GGSC
T ss_pred CCCeEEEECCCCCHHHHHHH--------hhc---------CeEEEEeCCHHHHHHHHHhCC-CcEEEe---CC---CCCC
Confidence 45799999999999998884 221 278889987655544444322 111222 23 4478
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+++++.++||+.+ ...+|+.-.+-|+|||++++....
T Consensus 73 ~~~~D~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~~~~~ 114 (170)
T 3i9f_A 73 DNSVDFILFANSFHDMDD--------------------------------------KQHVISEVKRILKDDGRVIIIDWR 114 (170)
T ss_dssp TTCEEEEEEESCSTTCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCceEEEEEccchhcccC--------------------------------------HHHHHHHHHHhcCCCCEEEEEEcC
Confidence 899999999999999642 234677788999999999999876
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
..+.... .......+.+|++++++ | |++.+....
T Consensus 115 ~~~~~~~---------------------------------~~~~~~~~~~~~~~~l~--G-f~~~~~~~~ 148 (170)
T 3i9f_A 115 KENTGIG---------------------------------PPLSIRMDEKDYMGWFS--N-FVVEKRFNP 148 (170)
T ss_dssp SSCCSSS---------------------------------SCGGGCCCHHHHHHHTT--T-EEEEEEECS
T ss_pred ccccccC---------------------------------chHhhhcCHHHHHHHHh--C-cEEEEccCC
Confidence 5542110 00124468999999998 8 999877765
No 75
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.88 E-value=1.3e-09 Score=103.88 Aligned_cols=175 Identities=10% Similarity=0.165 Sum_probs=99.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---C---cc----c-ccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---R---KY----Y-AAG 125 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~---~~----~-~~~ 125 (359)
...+|||+|||+|..+..++ .. ...+|+..|+...+-...-+..+. . .+ | +.-
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~--------~~--------~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d 111 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYF--------YG--------EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQET 111 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHH--------HT--------TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECC
T ss_pred CCCeEEEEecCCcHhHHHHH--------hc--------CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhh
Confidence 35799999999998776543 11 124788888887665544332211 0 11 2 221
Q ss_pred cCcccc-c---CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018250 126 VPGSFH-G---RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARA 201 (359)
Q Consensus 126 vpgsfy-~---~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra 201 (359)
+-++-+ . ..+|++++|+|+|..++||+-..+ |...+|+.-+
T Consensus 112 ~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~-----------------------------------~~~~~l~~~~ 156 (302)
T 2vdw_A 112 IRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPR-----------------------------------HYATVMNNLS 156 (302)
T ss_dssp TTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTT-----------------------------------THHHHHHHHH
T ss_pred cccchhhhhhhccccCCCeeEEEECchHHHhCCHH-----------------------------------HHHHHHHHHH
Confidence 222222 2 236889999999999999964321 2235888899
Q ss_pred HhhccCceeEEEeccCCCCCCC-CCcchhHHHHHH-HHHHHHHHHcCCCChh-------hhccCCccccCCCHHHHHHHH
Q 018250 202 EELVPGGLMVFSLITGPSGIPF-ADTVQGATYNFL-GSCLWDLAKMGVISEE-------KARTFNVPAYFPYVEELESLI 272 (359)
Q Consensus 202 ~EL~pGG~lvl~~~g~~~~~~~-~~~~~~~~~~~l-~~al~~lv~eGli~~e-------~~d~f~~P~y~ps~~E~~~~i 272 (359)
+-|||||+|+++++.+...... ........-... ...|.. -.-++.+ +......|.|+-+.+|+..++
T Consensus 157 r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~ 233 (302)
T 2vdw_A 157 ELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMS---VEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVF 233 (302)
T ss_dssp HHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEE---ECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHHH
T ss_pred HHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceee---eccccccccceeeccccCCCceeeeeEHHHHHHHH
Confidence 9999999999998754321000 000000000000 000000 0000000 001234567888999999999
Q ss_pred HhCCceeEeEEEEe
Q 018250 273 QRNGHFAMERMQQL 286 (359)
Q Consensus 273 ~~~G~F~i~~le~~ 286 (359)
++.| |++.....+
T Consensus 234 ~~~G-l~lv~~~~f 246 (302)
T 2vdw_A 234 NEYG-FVLVDNVDF 246 (302)
T ss_dssp HHTT-EEEEEEEEH
T ss_pred HHCC-CEEEEecCh
Confidence 9999 999888766
No 76
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.88 E-value=7.9e-09 Score=94.55 Aligned_cols=151 Identities=13% Similarity=0.143 Sum_probs=99.2
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc-c-------------
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK-Y------------- 121 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~-~------------- 121 (359)
....+|+|+|||+|..++.++ +. .+ .+|+..|+...+...+-+.+.... .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~--------~~-------~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 118 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSA--------CE-------SF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDL 118 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTG--------GG-------TE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHh--------hc-------cc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcc
Confidence 346899999999999998774 11 11 378888887765554433332210 0
Q ss_pred ----------------cc-cccCcccccCC-CCC---CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHH
Q 018250 122 ----------------YA-AGVPGSFHGRL-FPK---STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKG 180 (359)
Q Consensus 122 ----------------~~-~~vpgsfy~~l-~p~---~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~ 180 (359)
-+ ..+.+++.+.. +++ +++|+|+|+.+||++..-
T Consensus 119 ~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~------------------------- 173 (265)
T 2i62_A 119 EGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPD------------------------- 173 (265)
T ss_dssp TTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSS-------------------------
T ss_pred cccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCC-------------------------
Confidence 01 22234554433 356 899999999999975421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccc
Q 018250 181 VHETFQAQFRSDFESILNARAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPA 260 (359)
Q Consensus 181 ~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~ 260 (359)
..|...+|+.-++-|+|||+|++......+. . ..| ....+.
T Consensus 174 ---------~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~--~--------------------~~~--------~~~~~~ 214 (265)
T 2i62_A 174 ---------LPAYRTALRNLGSLLKPGGFLVMVDALKSSY--Y--------------------MIG--------EQKFSS 214 (265)
T ss_dssp ---------HHHHHHHHHHHHTTEEEEEEEEEEEESSCCE--E--------------------EET--------TEEEEC
T ss_pred ---------hHHHHHHHHHHHhhCCCCcEEEEEecCCCce--E--------------------EcC--------Cccccc
Confidence 1255668888899999999999988533220 0 001 112234
Q ss_pred cCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 261 YFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 261 y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
+..+.+++.++++++| |++..++...
T Consensus 215 ~~~~~~~~~~~l~~aG-f~~~~~~~~~ 240 (265)
T 2i62_A 215 LPLGWETVRDAVEEAG-YTIEQFEVIS 240 (265)
T ss_dssp CCCCHHHHHHHHHHTT-CEEEEEEEEC
T ss_pred cccCHHHHHHHHHHCC-CEEEEEEEec
Confidence 5678999999999999 9999988874
No 77
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.87 E-value=1.6e-08 Score=97.90 Aligned_cols=156 Identities=18% Similarity=0.162 Sum_probs=96.4
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGR 133 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~ 133 (359)
....+|+|+|||+|..+..++ +. .|..+++..|+ .......-+.+... .--+.-+.+++.+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~--------~~-------~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~- 243 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIA--------LR-------APHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK- 243 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHH--------HH-------CTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-
T ss_pred CCCCEEEEECCCcCHHHHHHH--------HH-------CCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-
Confidence 346799999999998888774 33 24678999999 54444333322110 0012223457765
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.+|.+ +|+++++.++|++++ .+...+|+.-++-|+|||++++.
T Consensus 244 ~~~~~-~D~v~~~~vl~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i~ 286 (374)
T 1qzz_A 244 PLPVT-ADVVLLSFVLLNWSD------------------------------------EDALTILRGCVRALEPGGRLLVL 286 (374)
T ss_dssp CCSCC-EEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCC-CCEEEEeccccCCCH------------------------------------HHHHHHHHHHHHhcCCCcEEEEE
Confidence 45654 999999999987431 12345788888999999999987
Q ss_pred ec--cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 214 LI--TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 214 ~~--g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
-. ..++.. ...+..+.+.+. ++..| ...++.+|++++++++| |++.++....
T Consensus 287 e~~~~~~~~~-------~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~ll~~aG-f~~~~~~~~~ 340 (374)
T 1qzz_A 287 DRADVEGDGA-------DRFFSTLLDLRM-LTFMG-------------GRVRTRDEVVDLAGSAG-LALASERTSG 340 (374)
T ss_dssp ECCH--------------HHHHHHHHHHH-HHHHS-------------CCCCCHHHHHHHHHTTT-EEEEEEEEEC
T ss_pred echhhcCCCC-------CcchhhhcchHH-HHhCC-------------CcCCCHHHHHHHHHHCC-CceEEEEECC
Confidence 76 332211 011121111111 11111 14589999999999999 9998887764
No 78
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.87 E-value=1.6e-08 Score=91.08 Aligned_cols=105 Identities=19% Similarity=0.260 Sum_probs=71.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+. +.. + +++..|+........-+..+. --+. .+++.+..+
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~--------~~~-------~--~v~~~D~s~~~~~~a~~~~~~-~~~~---~~d~~~~~~- 97 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFT--------KEF-------G--DTAGLELSEDMLTHARKRLPD-ATLH---QGDMRDFRL- 97 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHH--------HHH-------S--EEEEEESCHHHHHHHHHHCTT-CEEE---ECCTTTCCC-
T ss_pred CCCeEEEecccCCHHHHHHH--------HhC-------C--cEEEEeCCHHHHHHHHHhCCC-CEEE---ECCHHHccc-
Confidence 35799999999999998774 222 1 688888876555544443331 1122 235544334
Q ss_pred CCceeEEEec-CcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 137 KSTLHVVNSF-NAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 137 ~~s~d~~~S~-~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
++++|+|+|+ .++||+... .|+..+|+.-++-|+|||++++...
T Consensus 98 ~~~~D~v~~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 98 GRKFSAVVSMFSSVGYLKTT-----------------------------------EELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp SSCEEEEEECTTGGGGCCSH-----------------------------------HHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCcEEEEcCchHhhcCCH-----------------------------------HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 6899999954 499996421 2566788888999999999999876
Q ss_pred cCC
Q 018250 216 TGP 218 (359)
Q Consensus 216 g~~ 218 (359)
..+
T Consensus 143 ~~~ 145 (239)
T 3bxo_A 143 WFP 145 (239)
T ss_dssp CCT
T ss_pred cCc
Confidence 544
No 79
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.86 E-value=1.5e-08 Score=87.81 Aligned_cols=129 Identities=19% Similarity=0.193 Sum_probs=90.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+.. . ..+++..|.........-+..+. +..+.+++.+..+|
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~--------~---------~~~v~~~D~~~~~~~~a~~~~~~----~~~~~~d~~~~~~~ 104 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSK--------Q---------GHDVLGTDLDPILIDYAKQDFPE----ARWVVGDLSVDQIS 104 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHCTT----SEEEECCTTTSCCC
T ss_pred CCCeEEEECCCCCHHHHHHHH--------C---------CCcEEEEcCCHHHHHHHHHhCCC----CcEEEcccccCCCC
Confidence 357999999999999887741 1 24788888876555444444332 11122355554578
Q ss_pred CCceeEEEec-CcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 137 KSTLHVVNSF-NAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 137 ~~s~d~~~S~-~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
++++|+++++ ..+|+++. .+...+|+.-++-|+|||++++...
T Consensus 105 ~~~~D~i~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 105 ETDFDLIVSAGNVMGFLAE------------------------------------DGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp CCCEEEEEECCCCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCceeEEEECCcHHhhcCh------------------------------------HHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 8999999998 67887531 1445688888899999999999874
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
... ..+.+++...+++.| |++..+...
T Consensus 149 ~~~-------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~~ 175 (195)
T 3cgg_A 149 AGR-------------------------------------------GWVFGDFLEVAERVG-LELENAFES 175 (195)
T ss_dssp TTS-------------------------------------------SCCHHHHHHHHHHHT-EEEEEEESS
T ss_pred CCC-------------------------------------------CcCHHHHHHHHHHcC-CEEeeeecc
Confidence 321 146888999999999 998776543
No 80
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.85 E-value=1.1e-08 Score=96.31 Aligned_cols=153 Identities=18% Similarity=0.255 Sum_probs=95.0
Q ss_pred cceEEEeecCCC--CcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----CcccccccCccc
Q 018250 57 YTVRIADLGCSV--GPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKYYAAGVPGSF 130 (359)
Q Consensus 57 ~~~~IaDlGCs~--G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~~~~~vpgsf 130 (359)
+..+|+|||||+ |.|+..+++ .. .|+.+|+..|....+....-..+.. +--|+.+ ++
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~-------~~-------~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~a---D~ 140 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQ-------SV-------APESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEA---DM 140 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHH-------HH-------CTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEEC---CT
T ss_pred CCCEEEEeCCCCCcccHHHHHHH-------HH-------CCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEe---cc
Confidence 457899999998 778877752 22 3567899999876665443333332 1124443 33
Q ss_pred ccC--CC--C--CCcee-----EEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHH
Q 018250 131 HGR--LF--P--KSTLH-----VVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNA 199 (359)
Q Consensus 131 y~~--l~--p--~~s~d-----~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~ 199 (359)
.+. ++ | .+++| .++|+.+||||.+-. |....|+.
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~-----------------------------------~p~~~l~~ 185 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED-----------------------------------DAVGIVRR 185 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG-----------------------------------CHHHHHHH
T ss_pred cChhhhhcccccccccCcCCcchHHhhhhHhcCCchh-----------------------------------hHHHHHHH
Confidence 221 01 1 34455 588999999975421 12345666
Q ss_pred HHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCcee
Q 018250 200 RAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFA 279 (359)
Q Consensus 200 Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~ 279 (359)
-.+-|+|||+|+++.++.+.. + ...+.+.+.++. -..|+.++|.+|+...+. | |+
T Consensus 186 l~~~L~PGG~Lvls~~~~d~~-p-------~~~~~~~~~~~~--------------~g~p~~~rs~~ei~~~f~--G-le 240 (277)
T 3giw_A 186 LLEPLPSGSYLAMSIGTAEFA-P-------QEVGRVAREYAA--------------RNMPMRLRTHAEAEEFFE--G-LE 240 (277)
T ss_dssp HHTTSCTTCEEEEEEECCTTS-H-------HHHHHHHHHHHH--------------TTCCCCCCCHHHHHHTTT--T-SE
T ss_pred HHHhCCCCcEEEEEeccCCCC-H-------HHHHHHHHHHHh--------------cCCCCccCCHHHHHHHhC--C-Cc
Confidence 788999999999999876531 0 012333333322 223789999999999994 7 98
Q ss_pred EeEEEEe
Q 018250 280 MERMQQL 286 (359)
Q Consensus 280 i~~le~~ 286 (359)
+..-...
T Consensus 241 lvePG~v 247 (277)
T 3giw_A 241 LVEPGIV 247 (277)
T ss_dssp ECTTCSE
T ss_pred ccCCcEe
Confidence 7544333
No 81
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.85 E-value=8.5e-09 Score=91.88 Aligned_cols=112 Identities=16% Similarity=0.185 Sum_probs=81.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+. .+++..|+.... --+. .+++.+..+|
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~--------------------~~v~~~D~s~~~-----------~~~~---~~d~~~~~~~ 112 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR--------------------NPVHCFDLASLD-----------PRVT---VCDMAQVPLE 112 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC--------------------SCEEEEESSCSS-----------TTEE---ESCTTSCSCC
T ss_pred CCCeEEEECCcCCHHHHHhh--------------------ccEEEEeCCCCC-----------ceEE---EeccccCCCC
Confidence 35789999999999876551 367777876641 0122 2355555578
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+++.++|| . |...+|+.-++-|+|||+++++...
T Consensus 113 ~~~fD~v~~~~~l~~-~--------------------------------------~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 113 DESVDVAVFCLSLMG-T--------------------------------------NIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp TTCEEEEEEESCCCS-S--------------------------------------CHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred CCCEeEEEEehhccc-c--------------------------------------CHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 899999999999996 1 2234677778899999999997532
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEE
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQ 285 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~ 285 (359)
. .+++.+++.+++++.| |++.....
T Consensus 154 ~-------------------------------------------~~~~~~~~~~~l~~~G-f~~~~~~~ 178 (215)
T 2zfu_A 154 S-------------------------------------------RFEDVRTFLRAVTKLG-FKIVSKDL 178 (215)
T ss_dssp G-------------------------------------------GCSCHHHHHHHHHHTT-EEEEEEEC
T ss_pred C-------------------------------------------CCCCHHHHHHHHHHCC-CEEEEEec
Confidence 1 1238999999999999 99877554
No 82
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.83 E-value=3.9e-08 Score=94.81 Aligned_cols=155 Identities=17% Similarity=0.136 Sum_probs=97.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..+..++ +. .|..+++..|+ .......-+.+..... -+.-+.+++.+ .
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~--------~~-------~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~ 245 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIA--------RR-------APHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-P 245 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HH-------CTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-C
T ss_pred cCcEEEEeCCcCcHHHHHHH--------Hh-------CCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-C
Confidence 45799999999999988774 33 24678999999 5454443332211000 12223457765 4
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+|.+ +|+++++..+|.++. .+...+|+.-++-|+|||++++.-
T Consensus 246 ~~~~-~D~v~~~~vl~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 246 LPRK-ADAIILSFVLLNWPD------------------------------------HDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp CSSC-EEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCC-ccEEEEcccccCCCH------------------------------------HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5654 999999999986421 133457778889999999999876
Q ss_pred cc-CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 215 IT-GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 215 ~g-~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
.. .++... . .+..+.+.+ -++..| ...++.+|++++++++| |++.++....
T Consensus 289 ~~~~~~~~~---~----~~~~~~~~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~~~ 340 (360)
T 1tw3_A 289 RDDLHENSF---N----EQFTELDLR-MLVFLG-------------GALRTREKWDGLAASAG-LVVEEVRQLP 340 (360)
T ss_dssp CCBCGGGCC---S----HHHHHHHHH-HHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred EeccCCCCC---c----chhhhccHH-HhhhcC-------------CcCCCHHHHHHHHHHCC-CeEEEEEeCC
Confidence 55 332110 0 111111111 111112 14579999999999999 9998887764
No 83
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.82 E-value=9.1e-08 Score=93.10 Aligned_cols=152 Identities=16% Similarity=0.110 Sum_probs=94.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
+..+|+|+|||+|..+..++ +++ |..+++.-|+|. .. ...+.. .. +.-+.|+|++ .+|
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~--------~~~-------~~~~~~~~D~~~-~~-~~a~~~--~~--v~~~~~d~~~-~~~ 266 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELII--------SKY-------PLIKGINFDLPQ-VI-ENAPPL--SG--IEHVGGDMFA-SVP 266 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HHC-------TTCEEEEEECHH-HH-TTCCCC--TT--EEEEECCTTT-CCC
T ss_pred CCCEEEEeCCCCcHHHHHHH--------HHC-------CCCeEEEeChHH-HH-Hhhhhc--CC--CEEEeCCccc-CCC
Confidence 46799999999999998874 442 467888889842 21 111111 11 3334568877 567
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
+ +|+++++.+||++++ .+...+|+.-++-|+|||++++.-..
T Consensus 267 ~--~D~v~~~~~lh~~~d------------------------------------~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 267 Q--GDAMILKAVCHNWSD------------------------------------EKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp C--EEEEEEESSGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred C--CCEEEEecccccCCH------------------------------------HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 5 999999999997542 12346888889999999999988654
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
.++.... .....+..+.+.+ -|+..| ...++.+|++++++++| |++.++...
T Consensus 309 ~~~~~~~---~~~~~~~~~~d~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~~ 360 (372)
T 1fp1_D 309 LPEEPNT---SEESKLVSTLDNL-MFITVG-------------GRERTEKQYEKLSKLSG-FSKFQVACR 360 (372)
T ss_dssp ECSSCCS---SHHHHHHHHHHHH-HHHHHS-------------CCCEEHHHHHHHHHHTT-CSEEEEEEE
T ss_pred cCCCCcc---chHHHHHHHhhHH-HHhccC-------------CccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 4332110 0000001111111 111111 13469999999999999 998777664
No 84
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.79 E-value=4.8e-09 Score=96.71 Aligned_cols=157 Identities=17% Similarity=0.236 Sum_probs=96.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+. +. ..+++..|+........-+... . .+.. +++.+..+|
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~~l~~a~~~~~-~-~~~~---~d~~~~~~~ 111 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQ--------ER---------GFEVVLVDPSKEMLEVAREKGV-K-NVVE---AKAEDLPFP 111 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHH--------TT---------TCEEEEEESCHHHHHHHHHHTC-S-CEEE---CCTTSCCSC
T ss_pred CCCeEEEeCCCcCHHHHHHH--------Hc---------CCeEEEEeCCHHHHHHHHhhcC-C-CEEE---CcHHHCCCC
Confidence 35799999999999998774 11 2488999987765554443332 1 1333 355555588
Q ss_pred CCceeEEEecC-cccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 137 KSTLHVVNSFN-AMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 137 ~~s~d~~~S~~-alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
++++|+|+++. .+||..+ ...+|+.-++-|+|||++++.+.
T Consensus 112 ~~~fD~v~~~~~~~~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 112 SGAFEAVLALGDVLSYVEN--------------------------------------KDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp TTCEEEEEECSSHHHHCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEEEEcchhhhcccc--------------------------------------HHHHHHHHHHHcCCCeEEEEEeC
Confidence 99999999976 5677432 23467778899999999999987
Q ss_pred cCCCCCCCCCcchhHHHHHHH----HHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEeec
Q 018250 216 TGPSGIPFADTVQGATYNFLG----SCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLDQ 288 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~----~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~~ 288 (359)
+.... ..+.+. ..+..+...|...... ....++.++.+.+|++++ +| |++.++.....
T Consensus 154 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG-f~~~~~~~~~~ 215 (260)
T 2avn_A 154 NFYTF----------LQQMIEKDAWDQITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG-FETVDIRGIGV 215 (260)
T ss_dssp BHHHH----------HHHHHHTTCHHHHHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT-EEEEEEEEECS
T ss_pred ChHHH----------HHHhhcchhHHHHHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC-ceEEEEECCCC
Confidence 54310 000000 1112223334322000 001112247789999888 88 99988887643
No 85
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.79 E-value=1.1e-08 Score=91.26 Aligned_cols=106 Identities=16% Similarity=0.187 Sum_probs=70.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPK 137 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~ 137 (359)
..+|+|+|||+|..+..+. +. .+ +++..|+........-+......--+.-+.+++.+..+|+
T Consensus 39 ~~~vLDlG~G~G~~~~~l~--------~~-------~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 101 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLE--------DY-------GF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFED 101 (227)
T ss_dssp CCEEEEETCTTSHHHHHHH--------HT-------TC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCT
T ss_pred CCeEEEEeccCCHHHHHHH--------Hc-------CC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCC
Confidence 5799999999999887763 22 12 7888888765444333222100001112234565545788
Q ss_pred CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 138 STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 138 ~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
+++|+|+|+.++|+... .|...+|+.-++-|+|||++++....
T Consensus 102 ~~~D~v~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEP------------------------------------LELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp TCEEEEEEESCGGGCCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcEEEEEEcCchHhCCH------------------------------------HHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 99999999999554210 14556888889999999999998764
No 86
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.78 E-value=1.1e-07 Score=86.40 Aligned_cols=156 Identities=14% Similarity=0.010 Sum_probs=93.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc-ccccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK-YYAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~-~~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|.++..++. .. + +|+..|+........-+..+... -|+. +++.+..+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~--------~~-------~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~---~d~~~~~~ 115 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQ--------FF-------P--RVIGLDVSKSALEIAAKENTAANISYRL---LDGLVPEQ 115 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHH--------HS-------S--CEEEEESCHHHHHHHHHHSCCTTEEEEE---CCTTCHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHH--------hC-------C--CEEEEECCHHHHHHHHHhCcccCceEEE---Cccccccc
Confidence 457899999999999998852 21 2 67777877655555444443211 1222 23322111
Q ss_pred C-----CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 136 P-----KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 136 p-----~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
+ ..++|+++++.++||+.. .|...+|+.-++-|+|||++
T Consensus 116 ~~~~~~~~~~d~v~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l 159 (245)
T 3ggd_A 116 AAQIHSEIGDANIYMRTGFHHIPV------------------------------------EKRELLGQSLRILLGKQGAM 159 (245)
T ss_dssp HHHHHHHHCSCEEEEESSSTTSCG------------------------------------GGHHHHHHHHHHHHTTTCEE
T ss_pred ccccccccCccEEEEcchhhcCCH------------------------------------HHHHHHHHHHHHHcCCCCEE
Confidence 1 134899999999999642 14456788888999999998
Q ss_pred EEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChh---hhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 211 VFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEE---KARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 211 vl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e---~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
++.-++..+. ..+..+... ..| .... .+..-..| ...+.+|+.+.+ +| |++..-....
T Consensus 160 ~i~~~~~~~~---------~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--aG-f~~~~~~~~~ 220 (245)
T 3ggd_A 160 YLIELGTGCI---------DFFNSLLEK-----YGQ-LPYELLLVMEHGIRP-GIFTAEDIELYF--PD-FEILSQGEGL 220 (245)
T ss_dssp EEEEECTTHH---------HHHHHHHHH-----HSS-CCHHHHHHHTTTCCC-CCCCHHHHHHHC--TT-EEEEEEECCB
T ss_pred EEEeCCcccc---------HHHHHHHhC-----CCC-CchhhhhccccCCCC-CccCHHHHHHHh--CC-CEEEeccccc
Confidence 8888765431 111111111 011 1110 11112233 346899999999 88 9997766653
No 87
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.77 E-value=3.2e-08 Score=92.30 Aligned_cols=112 Identities=17% Similarity=0.175 Sum_probs=76.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC---CCcc--cccccCcccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP---PRKY--YAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~---~~~~--~~~~vpgsfy 131 (359)
...+|+|+|||+|..++.++ +. ..+|+..|+.........+... ...- -+..+.+++.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLV--------EE---------GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHH--------HT---------TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred CCCEEEEecCCCCHHHHHHH--------HC---------CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 35799999999999988774 22 2389999998766655544321 0000 0111123444
Q ss_pred cCC---CCCCceeEEEec-CcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 132 GRL---FPKSTLHVVNSF-NAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 132 ~~l---~p~~s~d~~~S~-~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
... ++++++|+|+|+ .++|++...... ..++..+|+.-++-|+||
T Consensus 120 ~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~-------------------------------~~~~~~~l~~~~~~Lkpg 168 (293)
T 3thr_A 120 TLDKDVPAGDGFDAVICLGNSFAHLPDSKGD-------------------------------QSEHRLALKNIASMVRPG 168 (293)
T ss_dssp GHHHHSCCTTCEEEEEECTTCGGGSCCSSSS-------------------------------SHHHHHHHHHHHHTEEEE
T ss_pred hCccccccCCCeEEEEEcChHHhhcCccccC-------------------------------HHHHHHHHHHHHHHcCCC
Confidence 433 789999999999 899997653321 135677888999999999
Q ss_pred ceeEEEecc
Q 018250 208 GLMVFSLIT 216 (359)
Q Consensus 208 G~lvl~~~g 216 (359)
|+|+++...
T Consensus 169 G~l~~~~~~ 177 (293)
T 3thr_A 169 GLLVIDHRN 177 (293)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEeCC
Confidence 999998853
No 88
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.74 E-value=4.5e-08 Score=94.68 Aligned_cols=158 Identities=9% Similarity=0.078 Sum_probs=99.9
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGR 133 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~ 133 (359)
.+..+|+|+|||+|..+..++ ++ .|..+++..|+ .......-+.+.... --+.-+.++|.+.
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 252 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAML--------KH-------FPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE 252 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHH--------HH-------CTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS
T ss_pred CCCCEEEEECCcccHHHHHHH--------HH-------CCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC
Confidence 346799999999999998884 33 24678999999 545444333321100 0122334688776
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.+|+. |+++++.++|.+++ .+...+|+.-++-|+|||++++.
T Consensus 253 ~~~~~--D~v~~~~vlh~~~d------------------------------------~~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 253 SYPEA--DAVLFCRILYSANE------------------------------------QLSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp CCCCC--SEEEEESCGGGSCH------------------------------------HHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCC--CEEEEechhccCCH------------------------------------HHHHHHHHHHHHhcCCCCEEEEE
Confidence 66655 99999999985321 13556888889999999999777
Q ss_pred eccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 214 LITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
-...++.. . . .+..+ + .|... ...-.....+++.+|++++++++| |++.++...
T Consensus 295 e~~~~~~~-~--~----~~~~~---~-~~~~~-------~~~g~~~~~~~t~~e~~~ll~~aG-f~~v~~~~~ 348 (359)
T 1x19_A 295 DMVIDDPE-N--P----NFDYL---S-HYILG-------AGMPFSVLGFKEQARYKEILESLG-YKDVTMVRK 348 (359)
T ss_dssp EECCCCTT-S--C----CHHHH---H-HHGGG-------GGSSCCCCCCCCGGGHHHHHHHHT-CEEEEEEEE
T ss_pred ecccCCCC-C--c----hHHHH---H-HHHHh-------cCCCCcccCCCCHHHHHHHHHHCC-CceEEEEec
Confidence 66554321 0 0 11111 1 22110 000111234689999999999999 998877665
No 89
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.74 E-value=6.5e-09 Score=93.89 Aligned_cols=105 Identities=18% Similarity=0.305 Sum_probs=69.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPK 137 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~ 137 (359)
..+|+|+|||+|..+..+++ . .+++..|+........-+.......-+.-+.+++.+..+|
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~----------------~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~- 94 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLAD----------------H--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP- 94 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTT----------------T--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-
T ss_pred CCeEEEecCCCCHHHHHHhh----------------C--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-
Confidence 37999999999998887741 1 4788888876555444333211000011122355444455
Q ss_pred CceeEEEecC-cccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 138 STLHVVNSFN-AMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 138 ~s~d~~~S~~-alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
+++|+++++. ++||+... .|...+|+.-++-|+|||++++.+..
T Consensus 95 ~~fD~v~~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQTE-----------------------------------ADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp SCEEEEEECTTGGGGCCSH-----------------------------------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcCEEEEeCCchhhcCCH-----------------------------------HHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 8999999987 99996321 25566888888999999999998754
No 90
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.73 E-value=1.6e-08 Score=88.24 Aligned_cols=140 Identities=13% Similarity=0.138 Sum_probs=89.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc-cccccCcccccCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY-YAAGVPGSFHGRLFP 136 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~-~~~~vpgsfy~~l~p 136 (359)
..+|+|+|||+|..+..+++ . ..+++..|+........-+....... -+..+.+++.+..+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~- 94 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAA--------N---------GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF- 94 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-
T ss_pred CCeEEEEcCCCCHHHHHHHH--------C---------CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-
Confidence 45999999999999887741 1 24788888876554443332211000 01222345555445
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+++.++||++. .|...+|+.-++-|+|||++++....
T Consensus 95 ~~~~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 95 DRQYDFILSTVVLMFLEA------------------------------------KTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp CCCEEEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCCceEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 789999999999999641 14456788888999999998776543
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
.....+. + ....+..+.+|+++.++. |++.+.+..
T Consensus 139 ~~~~~~~----------------------~----------~~~~~~~~~~~l~~~~~~---f~~~~~~~~ 173 (199)
T 2xvm_A 139 DTADYPC----------------------T----------VGFPFAFKEGELRRYYEG---WERVKYNED 173 (199)
T ss_dssp CCSSSCC----------------------C----------SCCSCCBCTTHHHHHTTT---SEEEEEECC
T ss_pred ccCCcCC----------------------C----------CCCCCccCHHHHHHHhcC---CeEEEeccc
Confidence 3221100 0 011245688999998864 988777643
No 91
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.72 E-value=3.3e-08 Score=90.60 Aligned_cols=144 Identities=17% Similarity=0.131 Sum_probs=88.1
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Cc-ccccccCccc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RK-YYAAGVPGSF 130 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~-~~~~~vpgsf 130 (359)
....+|+|+|||+|..|..++ +. ...+|+..|+..++.....+..+. .. -+....++++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la--------~~--------g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~ 99 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVML--------QN--------GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADF 99 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGC
T ss_pred CCCCEEEEEccCCCHHHHHHH--------hc--------CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHc
Confidence 345699999999999998874 22 113899999999887664443332 00 1111122344
Q ss_pred ccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 131 HGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 131 y~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
...+++..++|+++++. + .+|+.-++-|+|||++
T Consensus 100 ~~~~~d~~~~D~v~~~l--------~--------------------------------------~~l~~i~rvLkpgG~l 133 (232)
T 3opn_A 100 EQGRPSFTSIDVSFISL--------D--------------------------------------LILPPLYEILEKNGEV 133 (232)
T ss_dssp CSCCCSEEEECCSSSCG--------G--------------------------------------GTHHHHHHHSCTTCEE
T ss_pred CcCCCCEEEEEEEhhhH--------H--------------------------------------HHHHHHHHhccCCCEE
Confidence 33345556666665542 1 1456678899999999
Q ss_pred EEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 211 VFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 211 vl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
++.+ .+ .++ ..+..+-..|.+.... .+..+.+++.+.++++| |++..++..
T Consensus 134 v~~~--~p------------~~e---~~~~~~~~~G~~~d~~-------~~~~~~~~l~~~l~~aG-f~v~~~~~~ 184 (232)
T 3opn_A 134 AALI--KP------------QFE---AGREQVGKNGIIRDPK-------VHQMTIEKVLKTATQLG-FSVKGLTFS 184 (232)
T ss_dssp EEEE--CH------------HHH---SCHHHHC-CCCCCCHH-------HHHHHHHHHHHHHHHHT-EEEEEEEEC
T ss_pred EEEE--Cc------------ccc---cCHHHhCcCCeecCcc-------hhHHHHHHHHHHHHHCC-CEEEEEEEc
Confidence 9965 11 111 1222322345442221 13348999999999999 999888775
No 92
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.72 E-value=1.4e-08 Score=90.40 Aligned_cols=105 Identities=13% Similarity=0.172 Sum_probs=75.0
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-Cc-ccccccCcccccC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RK-YYAAGVPGSFHGR 133 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~-~~~~~vpgsfy~~ 133 (359)
....+|+|+|||+|..+..+. +. ..+++..|+........-+.... .. -|.. +++.+.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---~d~~~~ 109 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLA--------PH---------CKRLTVIDVMPRAIGRACQRTKRWSHISWAA---TDILQF 109 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHG--------GG---------EEEEEEEESCHHHHHHHHHHTTTCSSEEEEE---CCTTTC
T ss_pred CCCCcEEEEcCCCCHHHHHHH--------Hc---------CCEEEEEECCHHHHHHHHHhcccCCCeEEEE---cchhhC
Confidence 446899999999999988774 22 13788888877665555554443 11 1222 355443
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
. |++++|+|+++.++||+... .++..+|+.-++-|+|||+++++
T Consensus 110 ~-~~~~fD~v~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 110 S-TAELFDLIVVAEVLYYLEDM-----------------------------------TQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp C-CSCCEEEEEEESCGGGSSSH-----------------------------------HHHHHHHHHHHHTEEEEEEEEEE
T ss_pred C-CCCCccEEEEccHHHhCCCH-----------------------------------HHHHHHHHHHHHHcCCCCEEEEE
Confidence 3 78999999999999997531 14456788889999999999998
Q ss_pred ecc
Q 018250 214 LIT 216 (359)
Q Consensus 214 ~~g 216 (359)
...
T Consensus 154 ~~~ 156 (216)
T 3ofk_A 154 SAR 156 (216)
T ss_dssp EEC
T ss_pred ecC
Confidence 764
No 93
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.72 E-value=2.9e-08 Score=93.56 Aligned_cols=48 Identities=17% Similarity=0.310 Sum_probs=37.8
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
++++++|+|+|..++||+.- .....++..+|+.-++-|+|||+|++..
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl--------------------------------~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHL--------------------------------NWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHH--------------------------------HHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCcCEEEEChHHHHhhh--------------------------------cCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 57899999999999999420 0112367778999999999999999975
No 94
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.71 E-value=4.7e-08 Score=92.76 Aligned_cols=147 Identities=18% Similarity=0.111 Sum_probs=89.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccc-cccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYA-AGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~-~~vpgsfy~~l~ 135 (359)
...+|||+|||||..|..++ +. ..-+|+.-|+..++...-.+.-+.-..+- ..+ ...-..-+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~--------~~--------ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni-~~l~~~~l 147 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVML--------QN--------GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNF-RYAEPVDF 147 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCG-GGCCGGGC
T ss_pred cccEEEecCCCccHHHHHHH--------hC--------CCCEEEEEECCHHHHHHHHHhCcccceecccCc-eecchhhC
Confidence 45799999999999998774 21 12489999999988765333322100000 000 00000124
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|..++|++++..++||+.. +|..-++-|+|||++++..-
T Consensus 148 ~~~~fD~v~~d~sf~sl~~-----------------------------------------vL~e~~rvLkpGG~lv~lvk 186 (291)
T 3hp7_A 148 TEGLPSFASIDVSFISLNL-----------------------------------------ILPALAKILVDGGQVVALVK 186 (291)
T ss_dssp TTCCCSEEEECCSSSCGGG-----------------------------------------THHHHHHHSCTTCEEEEEEC
T ss_pred CCCCCCEEEEEeeHhhHHH-----------------------------------------HHHHHHHHcCcCCEEEEEEC
Confidence 6678999999999998632 34456789999999999741
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
..-+ .... .+-..|.+.... .+..+.+++.+.++..| |.+..+...
T Consensus 187 -Pqfe--~~~~--------------~~~~~G~vrd~~-------~~~~~~~~v~~~~~~~G-f~v~~~~~s 232 (291)
T 3hp7_A 187 -PQFE--AGRE--------------QIGKNGIVRESS-------IHEKVLETVTAFAVDYG-FSVKGLDFS 232 (291)
T ss_dssp -GGGT--SCGG--------------GCC-CCCCCCHH-------HHHHHHHHHHHHHHHTT-EEEEEEEEC
T ss_pred -cccc--cChh--------------hcCCCCccCCHH-------HHHHHHHHHHHHHHHCC-CEEEEEEEC
Confidence 1100 0000 000123332111 14457899999999999 999887765
No 95
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.71 E-value=1e-08 Score=90.49 Aligned_cols=157 Identities=11% Similarity=0.146 Sum_probs=96.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~ 133 (359)
...+|+|+|||+|..+..++ .. +..+++..|.........-+.... +--+. .+++.+.
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~--------~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---~~d~~~~ 83 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIF--------VE--------DGYKTYGIEISDLQLKKAENFSRENNFKLNIS---KGDIRKL 83 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHH--------HH--------TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEE---ECCTTSC
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh--------CCCEEEEEECCHHHHHHHHHHHHhcCCceEEE---ECchhhC
Confidence 35799999999999876553 11 135889999877665544333211 11122 2355555
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.+|++++|+|+++.++|+++ + .|...+|+.-++-|+|||++++.
T Consensus 84 ~~~~~~fD~v~~~~~l~~~~--~----------------------------------~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 84 PFKDESMSFVYSYGTIFHMR--K----------------------------------NDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp CSCTTCEEEEEECSCGGGSC--H----------------------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCceeEEEEcChHHhCC--H----------------------------------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 57889999999999999863 1 25566888889999999999999
Q ss_pred eccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEE
Q 018250 214 LITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQ 285 (359)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~ 285 (359)
.....+........ + .+.... ...+.......+.+.+|+...++..| |....-..
T Consensus 128 ~~~~~~~~~~~~~~---~------------~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~g-~~~~~~~~ 182 (209)
T 2p8j_A 128 FLTTKDERYNKGEK---I------------GEGEFL-QLERGEKVIHSYVSLEEADKYFKDMK-VLFKEDRV 182 (209)
T ss_dssp EEETTSTTTTCSEE---E------------ETTEEE-ECC-CCCEEEEEECHHHHHHTTTTSE-EEEEEEEE
T ss_pred Eecccchhccchhh---h------------ccccce-eccCCCceeEEecCHHHHHHHHhhcC-ceeeeeee
Confidence 98766532110000 0 000000 00011122236779999999999888 65543333
No 96
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.68 E-value=3.3e-08 Score=92.13 Aligned_cols=140 Identities=16% Similarity=0.215 Sum_probs=91.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|.++..++ +. ..+|+..|+........-+.......-+.-+.+++.+..+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~--------~~---------g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~- 181 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLS--------LL---------GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI- 181 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHH--------HT---------TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-
T ss_pred CCCcEEEECCCCCHHHHHHH--------HC---------CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-
Confidence 35789999999999998874 22 2488999987765544433322111112222345544444
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+|+.++||++. .++..+|+.-.+-|+|||++++....
T Consensus 182 ~~~fD~i~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 182 QENYDFIVSTVVFMFLNR------------------------------------ERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp CSCEEEEEECSSGGGSCG------------------------------------GGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred cCCccEEEEccchhhCCH------------------------------------HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 889999999999999742 14456888889999999998887654
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEE
Q 018250 217 GPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQ 285 (359)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~ 285 (359)
.....+. -..+.+..+.+|+++.+. + |++...+.
T Consensus 226 ~~~~~~~--------------------------------~~~~~~~~~~~~l~~~~~--~-~~~~~~~~ 259 (286)
T 3m70_A 226 STDDVPC--------------------------------PLPFSFTFAENELKEYYK--D-WEFLEYNE 259 (286)
T ss_dssp CCSSSCC--------------------------------SSCCSCCBCTTHHHHHTT--T-SEEEEEEC
T ss_pred CCCCCCC--------------------------------CCCccccCCHHHHHHHhc--C-CEEEEEEc
Confidence 3321100 011236677888888774 3 88877653
No 97
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.66 E-value=2.1e-07 Score=80.30 Aligned_cols=121 Identities=15% Similarity=0.108 Sum_probs=81.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+.. +-+-..+++..+++... .+++...|...-+ ...+|
T Consensus 12 ~g~~vL~~~~g~v~--vD~s~~ml~~a~~~~~~------~~~~~~~d~~~~~-----------------------~~~~~ 60 (176)
T 2ld4_A 12 AGQFVAVVWDKSSP--VEALKGLVDKLQALTGN------EGRVSVENIKQLL-----------------------QSAHK 60 (176)
T ss_dssp TTSEEEEEECTTSC--HHHHHHHHHHHHHHTTT------TSEEEEEEGGGGG-----------------------GGCCC
T ss_pred CCCEEEEecCCcee--eeCCHHHHHHHHHhccc------CcEEEEechhcCc-----------------------cccCC
Confidence 35789999999754 55666677766665421 2454444432100 01137
Q ss_pred CCceeEEEecCccccc-CCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 137 KSTLHVVNSFNAMHWL-SKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 137 ~~s~d~~~S~~alHWL-s~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
++++|+|+|+.++||+ .+ +..+|+.-++-|||||++++...
T Consensus 61 ~~~fD~V~~~~~l~~~~~~--------------------------------------~~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 61 ESSFDIILSGLVPGSTTLH--------------------------------------SAEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp SSCEEEEEECCSTTCCCCC--------------------------------------CHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEeEEEECChhhhcccC--------------------------------------HHHHHHHHHHHCCCCEEEEEEcc
Confidence 8999999999999997 32 12467778899999999999533
Q ss_pred cCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEE
Q 018250 216 TGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQ 285 (359)
Q Consensus 216 g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~ 285 (359)
.... .+ .+.|.++.+++.+.++++| | ++ ++.
T Consensus 103 ~~~~-------------------------~~-----------~~~~~~~~~~~~~~l~~aG-f-i~-~~~ 133 (176)
T 2ld4_A 103 VETA-------------------------VD-----------NNSKVKTASKLCSALTLSG-L-VE-VKE 133 (176)
T ss_dssp EESS-------------------------SC-----------SSSSSCCHHHHHHHHHHTT-C-EE-EEE
T ss_pred cccc-------------------------cc-----------cccccCCHHHHHHHHHHCC-C-cE-eec
Confidence 1110 00 1557789999999999999 9 76 444
No 98
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.66 E-value=2e-07 Score=80.71 Aligned_cols=72 Identities=15% Similarity=0.047 Sum_probs=50.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPK 137 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~ 137 (359)
..+|+|+|||+|..++.++ ++ - +++..|+....... ..+--++. +++.+ .+++
T Consensus 24 ~~~vLD~GcG~G~~~~~l~--------~~---------~-~v~gvD~s~~~~~~-----~~~~~~~~---~d~~~-~~~~ 76 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLR--------KR---------N-TVVSTDLNIRALES-----HRGGNLVR---ADLLC-SINQ 76 (170)
T ss_dssp SCEEEEETCTTCHHHHHHT--------TT---------S-EEEEEESCHHHHHT-----CSSSCEEE---CSTTT-TBCG
T ss_pred CCeEEEeccCccHHHHHHH--------hc---------C-cEEEEECCHHHHhc-----ccCCeEEE---CChhh-hccc
Confidence 3599999999999998873 11 1 88888887655433 11111222 45655 5677
Q ss_pred CceeEEEecCcccccCCCC
Q 018250 138 STLHVVNSFNAMHWLSKTP 156 (359)
Q Consensus 138 ~s~d~~~S~~alHWLs~~p 156 (359)
+++|+++|+..+||.+..+
T Consensus 77 ~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 77 ESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp GGCSEEEECCCCBTTCCCT
T ss_pred CCCCEEEECCCCccCCccc
Confidence 9999999999999977543
No 99
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.65 E-value=1.6e-07 Score=90.82 Aligned_cols=150 Identities=17% Similarity=0.099 Sum_probs=94.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-CcccccccCcccccCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~~~~~~vpgsfy~~l~p 136 (359)
..+|+|+|||+|..+..++ +++ |..+++.-|+|. .. ..... .. +.-+.++|++ .+|
T Consensus 194 ~~~vlDvG~G~G~~~~~l~--------~~~-------p~~~~~~~D~~~-~~----~~a~~~~~--v~~~~~d~~~-~~~ 250 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIH--------EIF-------PHLKCTVFDQPQ-VV----GNLTGNEN--LNFVGGDMFK-SIP 250 (358)
T ss_dssp CSEEEEETCTTSHHHHHHH--------HHC-------TTSEEEEEECHH-HH----SSCCCCSS--EEEEECCTTT-CCC
T ss_pred CCEEEEECCCcCHHHHHHH--------HHC-------CCCeEEEeccHH-HH----hhcccCCC--cEEEeCccCC-CCC
Confidence 4699999999999998884 442 456888889852 21 11111 11 3334578877 567
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CceeEEE
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP---GGLMVFS 213 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p---GG~lvl~ 213 (359)
++|+++++.+||++++ .+...+|+.-++.|+| ||++++.
T Consensus 251 --~~D~v~~~~vlh~~~d------------------------------------~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 251 --SADAVLLKWVLHDWND------------------------------------EQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp --CCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred --CceEEEEcccccCCCH------------------------------------HHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 4999999999997542 1234578888999999 9999987
Q ss_pred eccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 214 LITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 214 ~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
-...++..... .. .....+.+. .-|+..| ...++.+|++++++++| |++.++...
T Consensus 293 e~~~~~~~~~~--~~-~~~~~~~d~-~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~~~~~~~ 347 (358)
T 1zg3_A 293 DISIDETSDDR--GL-TELQLDYDL-VMLTMFL-------------GKERTKQEWEKLIYDAG-FSSYKITPI 347 (358)
T ss_dssp ECEECTTCSCH--HH-HHHHHHHHH-HHHHHHS-------------CCCEEHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EeccCCCCccc--hh-hhHHHhhCH-HHhccCC-------------CCCCCHHHHHHHHHHcC-CCeeEEEec
Confidence 65443321100 00 001111111 1111111 13569999999999999 998777653
No 100
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.65 E-value=5e-07 Score=87.10 Aligned_cols=150 Identities=17% Similarity=0.132 Sum_probs=94.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-CcccccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~~~~~~vpgsfy~~l~ 135 (359)
+..+|+|+|||+|..+..++ ++ .|..+++.-|+|. . ...... .. +.-+.++|++ .+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~~~-~----~~~a~~~~~--v~~~~~d~~~-~~ 244 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIIC--------ET-------FPKLKCIVFDRPQ-V----VENLSGSNN--LTYVGGDMFT-SI 244 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHH--------HH-------CTTCEEEEEECHH-H----HTTCCCBTT--EEEEECCTTT-CC
T ss_pred cCceEEEeCCCccHHHHHHH--------HH-------CCCCeEEEeeCHH-H----HhhcccCCC--cEEEeccccC-CC
Confidence 45799999999999888774 34 2567899999942 2 111111 11 3334568876 56
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CceeEE
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP---GGLMVF 212 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p---GG~lvl 212 (359)
|+ +|+++++.+||.+++ .+...+|+.-++-|+| ||++++
T Consensus 245 p~--~D~v~~~~~lh~~~d------------------------------------~~~~~~l~~~~~~L~p~~~gG~l~i 286 (352)
T 1fp2_A 245 PN--ADAVLLKYILHNWTD------------------------------------KDCLRILKKCKEAVTNDGKRGKVTI 286 (352)
T ss_dssp CC--CSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHHSGGGCCCEEEE
T ss_pred CC--ccEEEeehhhccCCH------------------------------------HHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 74 999999999995331 1233578888899999 999998
Q ss_pred EeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 213 SLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 213 ~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
.-...++.... ..+.. ...+.++.... + .-..++.+|++++++++| |++.++...
T Consensus 287 ~e~~~~~~~~~------~~~~~-~~~~~d~~~~~---------~--~g~~~t~~e~~~ll~~aG-f~~~~~~~~ 341 (352)
T 1fp2_A 287 IDMVIDKKKDE------NQVTQ-IKLLMDVNMAC---------L--NGKERNEEEWKKLFIEAG-FQHYKISPL 341 (352)
T ss_dssp EECEECTTTSC------HHHHH-HHHHHHHHGGG---------G--TCCCEEHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEeecCCCCCc------cchhh-hHhhccHHHHh---------c--cCCCCCHHHHHHHHHHCC-CCeeEEEec
Confidence 87654432110 00001 11122221100 0 124468999999999999 988776653
No 101
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.61 E-value=1.9e-07 Score=83.38 Aligned_cols=151 Identities=14% Similarity=0.109 Sum_probs=90.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-------Cc-ccccccCc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-------RK-YYAAGVPG 128 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-------~~-~~~~~vpg 128 (359)
...+|+|+|||+|..+..++ +. .|..+|+..|+...+...+.+.... .. .|.. +
T Consensus 27 ~~~~vLDiGcG~G~~~~~la--------~~-------~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~---~ 88 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVA--------RQ-------NPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLW---A 88 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHH--------HH-------CTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEE---C
T ss_pred CCCEEEEecCCCCHHHHHHH--------HH-------CCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEe---c
Confidence 45799999999999999884 33 2457999999998877754322111 11 2333 4
Q ss_pred ccccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 018250 129 SFHGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGG 208 (359)
Q Consensus 129 sfy~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 208 (359)
++.+..+++++ |.++. .+.|...... .-.|...+|+.-++-|||||
T Consensus 89 d~~~l~~~~~~-d~v~~--~~~~~~~~~~-------------------------------~~~~~~~~l~~~~~~LkpgG 134 (218)
T 3mq2_A 89 TAERLPPLSGV-GELHV--LMPWGSLLRG-------------------------------VLGSSPEMLRGMAAVCRPGA 134 (218)
T ss_dssp CSTTCCSCCCE-EEEEE--ESCCHHHHHH-------------------------------HHTSSSHHHHHHHHTEEEEE
T ss_pred chhhCCCCCCC-CEEEE--Eccchhhhhh-------------------------------hhccHHHHHHHHHHHcCCCc
Confidence 66665677777 77773 3334221000 00122347777889999999
Q ss_pred eeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEee
Q 018250 209 LMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQLD 287 (359)
Q Consensus 209 ~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~~ 287 (359)
++++++....-.... . +......+......+++...++++| |++..++.+.
T Consensus 135 ~l~~~~~~~~~~~~~-------------------------~--~~~~~~~~~~~~~~~~l~~~l~~aG-f~i~~~~~~~ 185 (218)
T 3mq2_A 135 SFLVALNLHAWRPSV-------------------------P--EVGEHPEPTPDSADEWLAPRYAEAG-WKLADCRYLE 185 (218)
T ss_dssp EEEEEEEGGGBTTBC-------------------------G--GGTTCCCCCHHHHHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred EEEEEeccccccccc-------------------------c--ccccCCccchHHHHHHHHHHHHHcC-CCceeeeccc
Confidence 999976432211000 0 0001111111113456888999999 9999998874
No 102
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.58 E-value=9.9e-08 Score=87.74 Aligned_cols=106 Identities=12% Similarity=0.020 Sum_probs=75.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC--CcccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP--RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~--~~~~~~~vpgsfy~~l 134 (359)
.-.+|+|+|||+|..|..+. +... |+=.||.-|....+...+-+.... .-..+.+..+....-.
T Consensus 77 pG~~VldlG~G~G~~~~~la--------~~VG------~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~ 142 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMS--------DIIG------PRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYR 142 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHHC------TTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGT
T ss_pred CCCEEEEecCcCCHHHHHHH--------HHhC------CCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccc
Confidence 35799999999999999885 3322 345899999988766666555443 2234555555555556
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
++.+++|++|+..+.|| |-..++..-.+-|||||+++++.
T Consensus 143 ~~~~~vDvVf~d~~~~~----------------------------------------~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 143 HLVEGVDGLYADVAQPE----------------------------------------QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp TTCCCEEEEEECCCCTT----------------------------------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccceEEEEEEeccCCh----------------------------------------hHHHHHHHHHHhccCCCEEEEEE
Confidence 77899999998776665 12236666778899999999987
Q ss_pred cc
Q 018250 215 IT 216 (359)
Q Consensus 215 ~g 216 (359)
-.
T Consensus 183 k~ 184 (233)
T 4df3_A 183 KA 184 (233)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 103
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.58 E-value=1.3e-07 Score=84.46 Aligned_cols=163 Identities=12% Similarity=0.068 Sum_probs=93.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----CcccccccCccccc-
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKYYAAGVPGSFHG- 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~~~~~vpgsfy~- 132 (359)
..+|+|+|||+|..++.++ +. .|..+++..|+.......+-+.... +-.++. ++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~la--------~~-------~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~---~d~~~~ 103 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMA--------KQ-------NPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLW---VDGSDL 103 (214)
T ss_dssp CCEEEEESCTTSHHHHHHH--------HH-------CTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEE---CCSSCG
T ss_pred CCeEEEEccCcCHHHHHHH--------HH-------CCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEe---CCHHHH
Confidence 5689999999999998874 33 2457899999877665544433211 111333 34433
Q ss_pred -CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 133 -RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 133 -~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
..+|++++|+|++++..+|...-... . .-+...||+.-++-|+|||+++
T Consensus 104 ~~~~~~~~~D~i~~~~~~~~~~~~~~~----~--------------------------~~~~~~~l~~~~~~LkpgG~l~ 153 (214)
T 1yzh_A 104 TDYFEDGEIDRLYLNFSDPWPKKRHEK----R--------------------------RLTYKTFLDTFKRILPENGEIH 153 (214)
T ss_dssp GGTSCTTCCSEEEEESCCCCCSGGGGG----G--------------------------STTSHHHHHHHHHHSCTTCEEE
T ss_pred HhhcCCCCCCEEEEECCCCccccchhh----h--------------------------ccCCHHHHHHHHHHcCCCcEEE
Confidence 33788999999999887774311000 0 0023457777888999999999
Q ss_pred EEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhh-ccCCccccCCCHHHHHHHHHhCCceeEeEEE
Q 018250 212 FSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKA-RTFNVPAYFPYVEELESLIQRNGHFAMERMQ 284 (359)
Q Consensus 212 l~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~-d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le 284 (359)
+.+... +........+.+.|.-..... |-...++......+++.-..+.| +.|-++.
T Consensus 154 ~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~t~~e~~~~~~g-~~i~~~~ 211 (214)
T 1yzh_A 154 FKTDNR---------------GLFEYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKG-QVIYRVE 211 (214)
T ss_dssp EEESCH---------------HHHHHHHHHHHHHTCEEEEEESSGGGSCCCCCCCCHHHHHTGGGC-CCCEEEE
T ss_pred EEeCCH---------------HHHHHHHHHHHHCCCeeeeccccccccCCCCCCCcHHHHHHHHCC-CCeEEEE
Confidence 876311 112233334444464221111 21222223334456777777777 6665543
No 104
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.55 E-value=2.2e-07 Score=84.50 Aligned_cols=106 Identities=21% Similarity=0.315 Sum_probs=69.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..++ +. ..+++..|+........-+.......-+.-+.+++.+..++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~--------~~---------~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~ 103 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELA--------ER---------GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK 103 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHH--------HT---------TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HC---------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC
Confidence 35799999999999998774 21 24789999877655544333221100011223455543444
Q ss_pred CCceeEEEecC-cccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 137 KSTLHVVNSFN-AMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 137 ~~s~d~~~S~~-alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
+++|+|++.. .+|+++ ..|...+|+.-++-|+|||++++.+.
T Consensus 104 -~~fD~v~~~~~~~~~~~------------------------------------~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 104 -NEFDAVTMFFSTIMYFD------------------------------------EEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp -SCEEEEEECSSGGGGSC------------------------------------HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCccEEEEcCCchhcCC------------------------------------HHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 7899999874 445532 02566788888999999999999875
Q ss_pred c
Q 018250 216 T 216 (359)
Q Consensus 216 g 216 (359)
.
T Consensus 147 ~ 147 (252)
T 1wzn_A 147 C 147 (252)
T ss_dssp C
T ss_pred c
Confidence 4
No 105
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.52 E-value=9.9e-08 Score=84.34 Aligned_cols=122 Identities=14% Similarity=0.121 Sum_probs=80.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|..++.+. +. +..+++..|+........-+.+.. .. +.-+.+++..
T Consensus 61 ~~~vLDiG~G~G~~~~~l~--------~~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~~d~~~-- 120 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAH--------KL--------GAKSVLATDISDESMTAAEENAALNGIYD--IALQKTSLLA-- 120 (205)
T ss_dssp CCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESCHHHHHHHHHHHHHTTCCC--CEEEESSTTT--
T ss_pred CCEEEEECCCCCHHHHHHH--------HC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCc--eEEEeccccc--
Confidence 4799999999999888763 11 234889999876554443333221 11 2222334433
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
++++++|+++++..+||+. .+|+.-.+-|+|||++++..
T Consensus 121 ~~~~~fD~i~~~~~~~~~~-----------------------------------------~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 121 DVDGKFDLIVANILAEILL-----------------------------------------DLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp TCCSCEEEEEEESCHHHHH-----------------------------------------HHGGGSGGGEEEEEEEEEEE
T ss_pred cCCCCceEEEECCcHHHHH-----------------------------------------HHHHHHHHhcCCCCEEEEEe
Confidence 4568999999988777631 24445568899999999975
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 215 ITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
.... +.+++...+++.| |++..+...
T Consensus 160 ~~~~---------------------------------------------~~~~~~~~~~~~G-f~~~~~~~~ 185 (205)
T 3grz_A 160 IDYL---------------------------------------------QLPKIEQALAENS-FQIDLKMRA 185 (205)
T ss_dssp EEGG---------------------------------------------GHHHHHHHHHHTT-EEEEEEEEE
T ss_pred cCcc---------------------------------------------cHHHHHHHHHHcC-CceEEeecc
Confidence 4322 3667788888899 988776653
No 106
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.50 E-value=1.9e-07 Score=87.24 Aligned_cols=100 Identities=12% Similarity=-0.001 Sum_probs=70.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCC-
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLF- 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~- 135 (359)
...+|+|+|||+|..|+.++ ++ ..+|+..|+..++...+-+..... .+.+++..-.+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La--------~~---------g~~V~gvD~S~~ml~~Ar~~~~~~-----~v~~~~~~~~~~ 102 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKAL--------ER---------GASVTVFDFSQRMCDDLAEALADR-----CVTIDLLDITAE 102 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHH--------HT---------TCEEEEEESCHHHHHHHHHHTSSS-----CCEEEECCTTSC
T ss_pred CcCEEEEEeCcchHHHHHHH--------hc---------CCEEEEEECCHHHHHHHHHHHHhc-----cceeeeeecccc
Confidence 45799999999999998884 22 248999999888777665555422 12233332212
Q ss_pred ----CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 136 ----PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 136 ----p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
+++++|+|+|+.++||+.. .|+..+|+.-++-| |||+++
T Consensus 103 ~~~~~~~~fD~Vv~~~~l~~~~~------------------------------------~~~~~~l~~l~~lL-PGG~l~ 145 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRLINRFTT------------------------------------EEARRACLGMLSLV-GSGTVR 145 (261)
T ss_dssp CCGGGTTCCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHH-TTSEEE
T ss_pred cccccCCCccEEEEhhhhHhCCH------------------------------------HHHHHHHHHHHHhC-cCcEEE
Confidence 2679999999999998531 24555677777888 999999
Q ss_pred EEec
Q 018250 212 FSLI 215 (359)
Q Consensus 212 l~~~ 215 (359)
+++.
T Consensus 146 lS~~ 149 (261)
T 3iv6_A 146 ASVK 149 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9885
No 107
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.46 E-value=1e-06 Score=81.02 Aligned_cols=99 Identities=17% Similarity=0.241 Sum_probs=67.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+. +. .|..+++..|+........-+..+. -.|.. +++....++
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~---~d~~~~~~~ 145 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFA--------DA-------LPEITTFGLDVSKVAIKAAAKRYPQ-VTFCV---ASSHRLPFS 145 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHH--------HT-------CTTSEEEEEESCHHHHHHHHHHCTT-SEEEE---CCTTSCSBC
T ss_pred CCCEEEEECCCCCHHHHHHH--------Hh-------CCCCeEEEEeCCHHHHHHHHHhCCC-cEEEE---cchhhCCCC
Confidence 35789999999999998874 22 1345899999887655544433321 11222 355455578
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
++++|+|+|+.+.+ +|+.-.+-|+|||++++..++
T Consensus 146 ~~~fD~v~~~~~~~---------------------------------------------~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 146 DTSMDAIIRIYAPC---------------------------------------------KAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp TTCEEEEEEESCCC---------------------------------------------CHHHHHHHEEEEEEEEEEEEC
T ss_pred CCceeEEEEeCChh---------------------------------------------hHHHHHHhcCCCcEEEEEEcC
Confidence 89999999865411 233456789999999999887
Q ss_pred CCC
Q 018250 217 GPS 219 (359)
Q Consensus 217 ~~~ 219 (359)
.+.
T Consensus 181 ~~~ 183 (269)
T 1p91_A 181 PRH 183 (269)
T ss_dssp TTT
T ss_pred HHH
Confidence 654
No 108
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.44 E-value=1.4e-07 Score=85.52 Aligned_cols=109 Identities=14% Similarity=0.153 Sum_probs=70.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccC--C
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGR--L 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~--l 134 (359)
...+|||+|||+|..+..+. +. ...+++..|+...+....-+.......-+.-+-+++.+. .
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~--------~~--------~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~ 123 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQ--------EA--------PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPT 123 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHH--------TS--------CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGG
T ss_pred CCCeEEEEeccCCHHHHHHH--------hc--------CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcc
Confidence 35799999999999988773 11 123789999988666555443321111111223455554 5
Q ss_pred CCCCceeEEEe-cCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 135 FPKSTLHVVNS-FNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 135 ~p~~s~d~~~S-~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
+|++++|+|++ .+++++ .... ..++..+|+.-++-|||||+|++.
T Consensus 124 ~~~~~fD~V~~d~~~~~~-~~~~---------------------------------~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 124 LPDGHFDGILYDTYPLSE-ETWH---------------------------------THQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp SCTTCEEEEEECCCCCBG-GGTT---------------------------------THHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cCCCceEEEEECCcccch-hhhh---------------------------------hhhHHHHHHHHHHhcCCCeEEEEE
Confidence 88999999999 666532 1111 124456788888999999999876
Q ss_pred ec
Q 018250 214 LI 215 (359)
Q Consensus 214 ~~ 215 (359)
..
T Consensus 170 ~~ 171 (236)
T 1zx0_A 170 NL 171 (236)
T ss_dssp CH
T ss_pred ec
Confidence 54
No 109
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.44 E-value=3.3e-07 Score=88.70 Aligned_cols=104 Identities=15% Similarity=0.132 Sum_probs=69.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGRLF 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~l~ 135 (359)
..+|+|+|||+|..++.++ +. +..+|+..|+. ......-+..... .--+.-+.+++.+-.+
T Consensus 67 ~~~VLDvGcG~G~~~~~la--------~~--------g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 129 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAA--------KA--------GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL 129 (349)
T ss_dssp TCEEEEESCTTSHHHHHHH--------HT--------TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred CCEEEEEeccchHHHHHHH--------HC--------CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccC
Confidence 4789999999999988874 21 23489999998 4443333322110 0002222346666668
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
|++++|+|+|....+++... .++..+|+.+.+-|+|||+|+..
T Consensus 130 ~~~~fD~Iis~~~~~~l~~~-----------------------------------~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 130 PVEKVDIIISEWMGYCLFYE-----------------------------------SMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp SSSCEEEEEECCCBBTBTBT-----------------------------------CCHHHHHHHHHHHEEEEEEEESC
T ss_pred CCCceEEEEEccccccccCc-----------------------------------hhHHHHHHHHHHhCCCCCEEccc
Confidence 99999999998766664321 14556888999999999999743
No 110
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.43 E-value=9.1e-08 Score=86.62 Aligned_cols=139 Identities=11% Similarity=0.141 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHHHH-hhhcc-CCCCCCCCcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEec
Q 018250 25 QFQRGTVDAAKELVREAIV-NKLDV-GSYGYDNSYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFN 102 (359)
Q Consensus 25 ~~Q~~~~~~~~~~l~~ai~-~~~~~-~~~~~~~~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~n 102 (359)
..|++.++...|.+.-... ..++. ..+ .....+|+|+|||+|..++.++ +. .|+..|+..
T Consensus 3 ~~q~~~~~~~~~~~~~~~~~~~~d~~~~f---~~~~~~vLDiGcG~G~~~~~lA--------~~-------~p~~~v~gi 64 (218)
T 3dxy_A 3 SGQEHALENYWPVMGVEFSEDMLDFPALF---GREAPVTLEIGFGMGASLVAMA--------KD-------RPEQDFLGI 64 (218)
T ss_dssp ----CHHHHHHHHHBCCCCSSCCCHHHHH---SSCCCEEEEESCTTCHHHHHHH--------HH-------CTTSEEEEE
T ss_pred HHHHHHHHHHhHHhCCCCCCCCCCHHHHc---CCCCCeEEEEeeeChHHHHHHH--------HH-------CCCCeEEEE
Confidence 4577777777776531000 00000 001 1245789999999999998884 33 356789999
Q ss_pred CCCCCchHHHHHhCCC---Cc-ccccccCccccc---CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeec
Q 018250 103 DHTENDFNTLFRTLPP---RK-YYAAGVPGSFHG---RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCT 175 (359)
Q Consensus 103 DLp~NDFn~lf~~l~~---~~-~~~~~vpgsfy~---~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~ 175 (359)
|+.......+-+.... .. .|+. ++..+ ..+|++++|.+++++...|-..... +.++.
T Consensus 65 D~s~~~l~~a~~~~~~~~l~nv~~~~---~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~rr~~-- 128 (218)
T 3dxy_A 65 EVHSPGVGACLASAHEEGLSNLRVMC---HDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHN-----------KRRIV-- 128 (218)
T ss_dssp CSCHHHHHHHHHHHHHTTCSSEEEEC---SCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGG-----------GGSSC--
T ss_pred EecHHHHHHHHHHHHHhCCCcEEEEE---CCHHHHHHHHcCCCChheEEEeCCCCccchhhh-----------hhhhh--
Confidence 9988776655444321 12 2333 34333 3489999999999999888332100 00000
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 176 RFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 176 ~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
-..||+.-++-|+|||++++.+
T Consensus 129 -----------------~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 129 -----------------QVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp -----------------SHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------hHHHHHHHHHHcCCCcEEEEEe
Confidence 0137778889999999999987
No 111
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.42 E-value=2.8e-07 Score=81.40 Aligned_cols=103 Identities=14% Similarity=0.068 Sum_probs=66.8
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc-ccccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK-YYAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~-~~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|..++.++ +. .|..+++..|+.......+-+.+.... --+..+.+++.+.+.
T Consensus 40 ~~~~vLDiG~G~G~~~~~la--------~~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~ 104 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEAS--------NL-------MPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD 104 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HH-------CTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT
T ss_pred CCCEEEEECCCCCHHHHHHH--------HH-------CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh
Confidence 45799999999999998884 33 245689999987755544433321100 001122245544444
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
+..++|++++..+++ +...+|+.-.+-|+|||++++...
T Consensus 105 ~~~~~D~i~~~~~~~-----------------------------------------~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 105 DLPDPDRVFIGGSGG-----------------------------------------MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp TSCCCSEEEESCCTT-----------------------------------------CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cCCCCCEEEECCCCc-----------------------------------------CHHHHHHHHHHhcCCCeEEEEEec
Confidence 447899999876554 122467777889999999999764
No 112
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.41 E-value=8.2e-07 Score=77.90 Aligned_cols=111 Identities=15% Similarity=0.148 Sum_probs=68.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCC--
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRL-- 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l-- 134 (359)
...+|+|+|||+|..|..++ ++++ .+..+|+..|+.... .++ .-.|+ -+++.+..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~--------~~~~-----~~~~~v~gvD~s~~~------~~~-~v~~~---~~d~~~~~~~ 78 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVIL--------ERTK-----NYKNKIIGIDKKIMD------PIP-NVYFI---QGEIGKDNMN 78 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHH--------HHTT-----TSCEEEEEEESSCCC------CCT-TCEEE---ECCTTTTSSC
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHcC-----CCCceEEEEeCCccC------CCC-CceEE---Eccccchhhh
Confidence 35799999999999999884 3331 014678888886621 011 11111 12333322
Q ss_pred -----------------------CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHH
Q 018250 135 -----------------------FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRS 191 (359)
Q Consensus 135 -----------------------~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~ 191 (359)
+|++++|+|+|+.++||... + ..+ . + ...+
T Consensus 79 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~-~--~~d-------------------~---~--~~~~ 131 (201)
T 2plw_A 79 NIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGN-K--IDD-------------------H---L--NSCE 131 (201)
T ss_dssp CC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSC-H--HHH-------------------H---H--HHHH
T ss_pred hhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCC-c--ccC-------------------H---H--HHHH
Confidence 57889999999999999421 0 000 0 0 0112
Q ss_pred HHHHHHHHHHHhhccCceeEEEeccC
Q 018250 192 DFESILNARAEELVPGGLMVFSLITG 217 (359)
Q Consensus 192 D~~~fL~~Ra~EL~pGG~lvl~~~g~ 217 (359)
....+|+.-.+-|+|||+|++.++..
T Consensus 132 ~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 132 LTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 23456777788999999999987653
No 113
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.41 E-value=1.3e-06 Score=76.93 Aligned_cols=120 Identities=17% Similarity=0.187 Sum_probs=78.8
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-Cc-ccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RK-YYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~-~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..+..++ +. .+. +++..|+........-+.... .. -+. .+++.+..
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~--------~~-------~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~---~~d~~~~~ 102 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELF--------LG-------GFP-NVTSVDYSSVVVAAMQACYAHVPQLRWE---TMDVRKLD 102 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHH--------HT-------TCC-CEEEEESCHHHHHHHHHHTTTCTTCEEE---ECCTTSCC
T ss_pred CCCeEEEECCCCcHHHHHHH--------Hc-------CCC-cEEEEeCCHHHHHHHHHhcccCCCcEEE---EcchhcCC
Confidence 35789999999999998774 22 112 788889877665555444432 11 122 23554445
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
++++++|+|+++.++|.+..... ..|+. . .....|...+|+.-.+-|+|||++++..
T Consensus 103 ~~~~~fD~v~~~~~~~~~~~~~~-------~~~~~--------~--------~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 103 FPSASFDVVLEKGTLDALLAGER-------DPWTV--------S--------SEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp SCSSCEEEEEEESHHHHHTTTCS-------CTTSC--------C--------HHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcccEEEECcchhhhccccc-------ccccc--------c--------cchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 78899999999999987542111 11111 0 1123466788988999999999999998
Q ss_pred ccCC
Q 018250 215 ITGP 218 (359)
Q Consensus 215 ~g~~ 218 (359)
++.+
T Consensus 160 ~~~~ 163 (215)
T 2pxx_A 160 SAAP 163 (215)
T ss_dssp SCCH
T ss_pred CCCc
Confidence 7654
No 114
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.40 E-value=1.5e-06 Score=78.21 Aligned_cols=69 Identities=14% Similarity=0.087 Sum_probs=46.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCC-C
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRL-F 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l-~ 135 (359)
...+|+|+|||+|..+..++ +. ..+|+..|+........-+..+ +-.|+. +++.+.+ +
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~--------~~---------~~~v~~vD~s~~~~~~a~~~~~-~~~~~~---~d~~~~~~~ 106 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFG--------PQ---------AARWAAYDFSPELLKLARANAP-HADVYE---WNGKGELPA 106 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHG--------GG---------SSEEEEEESCHHHHHHHHHHCT-TSEEEE---CCSCSSCCT
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc---------CCEEEEEECCHHHHHHHHHhCC-CceEEE---cchhhccCC
Confidence 35799999999999888774 11 2488999987765554444422 112232 3553333 6
Q ss_pred C-CCceeEEEec
Q 018250 136 P-KSTLHVVNSF 146 (359)
Q Consensus 136 p-~~s~d~~~S~ 146 (359)
+ ++++|+|+|+
T Consensus 107 ~~~~~fD~v~~~ 118 (226)
T 3m33_A 107 GLGAPFGLIVSR 118 (226)
T ss_dssp TCCCCEEEEEEE
T ss_pred cCCCCEEEEEeC
Confidence 6 8999999997
No 115
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.35 E-value=1.3e-06 Score=74.66 Aligned_cols=99 Identities=14% Similarity=0.128 Sum_probs=68.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---C-cccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---R-KYYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~-~~~~~~vpgsfy~ 132 (359)
...+|+|+|||+|..++.++ +. .|..+++..|+........-+.+.. . .+++. ++..+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~--------~~-------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~---~d~~~ 86 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWL--------RS-------TPQTTAVCFEISEERRERILSNAINLGVSDRIAVQ---QGAPR 86 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHH--------TT-------SSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEE---CCTTG
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HH-------CCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEe---cchHh
Confidence 45799999999999998874 22 2457899999987665554443321 1 23333 34433
Q ss_pred CCCCC--CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 133 RLFPK--STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 133 ~l~p~--~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
.+|. +++|+++++.++|| +. +|+.-.+-|+|||++
T Consensus 87 -~~~~~~~~~D~i~~~~~~~~----~~--------------------------------------~l~~~~~~L~~gG~l 123 (178)
T 3hm2_A 87 -AFDDVPDNPDVIFIGGGLTA----PG--------------------------------------VFAAAWKRLPVGGRL 123 (178)
T ss_dssp -GGGGCCSCCSEEEECC-TTC----TT--------------------------------------HHHHHHHTCCTTCEE
T ss_pred -hhhccCCCCCEEEECCcccH----HH--------------------------------------HHHHHHHhcCCCCEE
Confidence 3444 89999999999988 11 566677899999999
Q ss_pred EEEecc
Q 018250 211 VFSLIT 216 (359)
Q Consensus 211 vl~~~g 216 (359)
++....
T Consensus 124 ~~~~~~ 129 (178)
T 3hm2_A 124 VANAVT 129 (178)
T ss_dssp EEEECS
T ss_pred EEEeec
Confidence 988753
No 116
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.33 E-value=4.8e-07 Score=78.06 Aligned_cols=107 Identities=13% Similarity=0.086 Sum_probs=70.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~ 133 (359)
...+|+|+|||+|..+..++. . ..+++..|+........-+.+.. ...-+..+.+++.+
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~--------~---------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~- 113 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALAD--------E---------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE- 113 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGG--------G---------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-
T ss_pred CCCeEEEeCCCCCHHHHHHHH--------c---------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-
Confidence 457999999999999887741 1 24788888766554443333211 11001112235544
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.++++++|+++++..+||- ..++..+|+.-.+-|+|||++++.
T Consensus 114 ~~~~~~~D~v~~~~~~~~~-------------------------------------~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 114 NVKDRKYNKIITNPPIRAG-------------------------------------KEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp TCTTSCEEEEEECCCSTTC-------------------------------------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCceEEEECCCcccc-------------------------------------hhHHHHHHHHHHHHcCCCCEEEEE
Confidence 4567899999999888871 124556888889999999999999
Q ss_pred eccCC
Q 018250 214 LITGP 218 (359)
Q Consensus 214 ~~g~~ 218 (359)
.....
T Consensus 157 ~~~~~ 161 (194)
T 1dus_A 157 IQTKQ 161 (194)
T ss_dssp EESTH
T ss_pred ECCCC
Confidence 87543
No 117
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.33 E-value=9e-07 Score=86.53 Aligned_cols=105 Identities=21% Similarity=0.185 Sum_probs=71.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~l 134 (359)
...+|||+|||+|..++.++ +. ...+|+..|+. ++....-+.+... .--+.-+.++..+-.
T Consensus 63 ~~~~VLDlGcGtG~ls~~la--------~~--------g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 125 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSA--------QA--------GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS 125 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHH--------HT--------TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred CCCEEEEeccCcCHHHHHHH--------hc--------CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC
Confidence 45799999999999988774 22 11389999998 6655443333211 000122234665555
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+| +++|+|+|....|++... .++..+|+.+.+-|+|||+|++..
T Consensus 126 ~~-~~~D~Iv~~~~~~~l~~e-----------------------------------~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 126 LP-EKVDVIISEWMGYFLLRE-----------------------------------SMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CS-SCEEEEEECCCBTTBTTT-----------------------------------CTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cC-CcceEEEEcChhhcccch-----------------------------------HHHHHHHHHHHhhCCCCeEEEEec
Confidence 66 899999998777775421 145668889999999999997754
No 118
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.32 E-value=5.6e-07 Score=88.38 Aligned_cols=109 Identities=16% Similarity=0.150 Sum_probs=74.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..++.+. +. ..+|+..|.........-+++.....-+.-+.+++.+.+.+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la--------~~---------g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~ 295 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLA--------RM---------GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTE 295 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHH--------HT---------TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCT
T ss_pred CCCEEEEEeeeCCHHHHHHH--------Hc---------CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhcccc
Confidence 35799999999999999885 21 24888888866554444333321110012223466666667
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
++++|+|+|+..+||...... .+...||+.-.+-|+|||+++++..
T Consensus 296 ~~~fD~Ii~npp~~~~~~~~~---------------------------------~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 296 EARFDIIVTNPPFHVGGAVIL---------------------------------DVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp TCCEEEEEECCCCCTTCSSCC---------------------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCeEEEEECCchhhcccccH---------------------------------HHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 799999999999998443221 2556788888999999999999864
No 119
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.32 E-value=8.7e-07 Score=74.91 Aligned_cols=112 Identities=20% Similarity=0.162 Sum_probs=71.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCC--
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRL-- 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l-- 134 (359)
...+|+|+|||+|..+..++ +.+ .|..+++..|+.. ... ++ +--+.. +++.+..
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~--------~~~------~~~~~v~~~D~~~-~~~-----~~-~~~~~~---~d~~~~~~~ 77 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVV--------TQI------GGKGRIIACDLLP-MDP-----IV-GVDFLQ---GDFRDELVM 77 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHH--------HHH------CTTCEEEEEESSC-CCC-----CT-TEEEEE---SCTTSHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHH--------HHh------CCCCeEEEEECcc-ccc-----cC-cEEEEE---cccccchhh
Confidence 35699999999999998875 222 1235788888765 321 11 111222 2443322
Q ss_pred ------CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 018250 135 ------FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGG 208 (359)
Q Consensus 135 ------~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 208 (359)
++++++|+++++..+||...... + . .........+|+.-.+-|+|||
T Consensus 78 ~~~~~~~~~~~~D~i~~~~~~~~~~~~~~---~-------------------~-----~~~~~~~~~~l~~~~~~L~~gG 130 (180)
T 1ej0_A 78 KALLERVGDSKVQVVMSDMAPNMSGTPAV---D-------------------I-----PRAMYLVELALEMCRDVLAPGG 130 (180)
T ss_dssp HHHHHHHTTCCEEEEEECCCCCCCSCHHH---H-------------------H-----HHHHHHHHHHHHHHHHHEEEEE
T ss_pred hhhhccCCCCceeEEEECCCccccCCCcc---c-------------------h-----HHHHHHHHHHHHHHHHHcCCCc
Confidence 67889999999999999653110 0 0 0011223667888889999999
Q ss_pred eeEEEeccCCC
Q 018250 209 LMVFSLITGPS 219 (359)
Q Consensus 209 ~lvl~~~g~~~ 219 (359)
+++++.....+
T Consensus 131 ~l~~~~~~~~~ 141 (180)
T 1ej0_A 131 SFVVKVFQGEG 141 (180)
T ss_dssp EEEEEEESSTT
T ss_pred EEEEEEecCCc
Confidence 99998875543
No 120
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.31 E-value=9.4e-07 Score=77.15 Aligned_cols=107 Identities=16% Similarity=0.128 Sum_probs=70.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---Cc-ccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RK-YYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~-~~~~~vpgsfy~ 132 (359)
...+|+|+|||+|..++.++ +. +..+|+..|+.......+-+.+.. .. -++. +++.+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~--------~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~ 104 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEAL--------SR--------GAASVLFVESDQRSAAVIARNIEALGLSGATLRR---GAVAA 104 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT--------TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEE---SCHHH
T ss_pred CCCEEEEeCCCcCHHHHHHH--------HC--------CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEE---ccHHH
Confidence 35789999999999998764 11 124789999877665544433321 11 1222 34443
Q ss_pred CC--CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHH--hhccCc
Q 018250 133 RL--FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAE--ELVPGG 208 (359)
Q Consensus 133 ~l--~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~--EL~pGG 208 (359)
.+ ++++++|+++++..+||.. .++..+|+...+ -|+|||
T Consensus 105 ~~~~~~~~~fD~i~~~~p~~~~~-------------------------------------~~~~~~l~~~~~~~~L~pgG 147 (189)
T 3p9n_A 105 VVAAGTTSPVDLVLADPPYNVDS-------------------------------------ADVDAILAALGTNGWTREGT 147 (189)
T ss_dssp HHHHCCSSCCSEEEECCCTTSCH-------------------------------------HHHHHHHHHHHHSSSCCTTC
T ss_pred HHhhccCCCccEEEECCCCCcch-------------------------------------hhHHHHHHHHHhcCccCCCe
Confidence 32 4678999999988777721 244456666666 899999
Q ss_pred eeEEEeccCCC
Q 018250 209 LMVFSLITGPS 219 (359)
Q Consensus 209 ~lvl~~~g~~~ 219 (359)
++++....+..
T Consensus 148 ~l~~~~~~~~~ 158 (189)
T 3p9n_A 148 VAVVERATTCA 158 (189)
T ss_dssp EEEEEEETTSC
T ss_pred EEEEEecCCCC
Confidence 99999876544
No 121
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.30 E-value=1.2e-06 Score=75.92 Aligned_cols=110 Identities=11% Similarity=0.061 Sum_probs=65.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---Cc-ccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RK-YYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~-~~~~~vpgsfy~ 132 (359)
...+|+|+|||+|..|+.+++ . ..+|+..|+........-+.... .. .|.. +++..
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~--------~---------~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~---~~~~~ 81 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAG--------L---------SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL---DGHEN 81 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHT--------T---------SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE---SCGGG
T ss_pred CCCEEEEEcCCCCHHHHHHHH--------h---------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CcHHH
Confidence 357899999999999998841 1 25888999877665544333321 11 1222 23332
Q ss_pred CC-CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 133 RL-FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 133 ~l-~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
.. ++++++|+++++. +|+......+.. ...+...+|+.-.+-|+|||+++
T Consensus 82 l~~~~~~~fD~v~~~~--~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~~~LkpgG~l~ 132 (185)
T 3mti_A 82 LDHYVREPIRAAIFNL--GYLPSADKSVIT---------------------------KPHTTLEAIEKILDRLEVGGRLA 132 (185)
T ss_dssp GGGTCCSCEEEEEEEE--C--------------------------------------CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHhhccCCcCEEEEeC--CCCCCcchhccc---------------------------ChhhHHHHHHHHHHhcCCCcEEE
Confidence 11 4578999998863 443321111000 01234456777788999999999
Q ss_pred EEec
Q 018250 212 FSLI 215 (359)
Q Consensus 212 l~~~ 215 (359)
+...
T Consensus 133 i~~~ 136 (185)
T 3mti_A 133 IMIY 136 (185)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9876
No 122
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.30 E-value=6.3e-06 Score=73.80 Aligned_cols=124 Identities=15% Similarity=0.079 Sum_probs=68.7
Q ss_pred cceEEEeecCC-CCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccc-cCC
Q 018250 57 YTVRIADLGCS-VGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFH-GRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs-~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy-~~l 134 (359)
...+|+|+||| +|..++.++. .. ..+|+..|+........-+.+.....-+.-+-++.. -..
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~--------~~--------~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 118 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEK--------FF--------NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKG 118 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHH--------HH--------CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTT
T ss_pred CCCEEEEcCCCHHHHHHHHHHH--------hc--------CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhh
Confidence 45799999999 9999998752 21 247888888765554443332211101111122321 123
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+|++++|+|+++-.++|..... ..+.. .++..+ .. ...+...+|+.-.+-|+|||++++.+
T Consensus 119 ~~~~~fD~I~~npp~~~~~~~~--~~~~~-~~~~~~-----~~-----------~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 119 VVEGTFDVIFSAPPYYDKPLGR--VLTER-EAIGGG-----KY-----------GEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp TCCSCEEEEEECCCCC------------------CC-----SS-----------SCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cccCceeEEEECCCCcCCcccc--ccChh-hhhccC-----cc-----------chHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 5679999999998888855411 11100 000000 00 11234568888889999999999986
Q ss_pred c
Q 018250 215 I 215 (359)
Q Consensus 215 ~ 215 (359)
.
T Consensus 180 ~ 180 (230)
T 3evz_A 180 P 180 (230)
T ss_dssp E
T ss_pred c
Confidence 4
No 123
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.30 E-value=1.2e-06 Score=80.85 Aligned_cols=124 Identities=14% Similarity=0.071 Sum_probs=80.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPK 137 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~ 137 (359)
..+|+|+|||+|..++.+. +. .+ +++..|+........-++......-+..+.+++.. .+|+
T Consensus 121 ~~~VLDiGcG~G~l~~~la--------~~-------g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~ 182 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAE--------KL-------GG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPF 182 (254)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HT-------TC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGG
T ss_pred CCEEEEecCCCcHHHHHHH--------Hh-------CC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcC
Confidence 4689999999999888763 22 12 89999987766554443322111002222234433 2577
Q ss_pred CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEeccC
Q 018250 138 STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLITG 217 (359)
Q Consensus 138 ~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~g~ 217 (359)
+++|+++++...|++ ..++..-.+-|+|||+++++....
T Consensus 183 ~~fD~Vv~n~~~~~~-----------------------------------------~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 183 GPFDLLVANLYAELH-----------------------------------------AALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp CCEEEEEEECCHHHH-----------------------------------------HHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred CCCCEEEECCcHHHH-----------------------------------------HHHHHHHHHHcCCCCEEEEEeecc
Confidence 899999997655442 235666678899999999975321
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEEe
Q 018250 218 PSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQL 286 (359)
Q Consensus 218 ~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~~ 286 (359)
.+.+++.+.+++.| |++.++...
T Consensus 222 ---------------------------------------------~~~~~v~~~l~~~G-f~~~~~~~~ 244 (254)
T 2nxc_A 222 ---------------------------------------------DRAPLVREAMAGAG-FRPLEEAAE 244 (254)
T ss_dssp ---------------------------------------------GGHHHHHHHHHHTT-CEEEEEEEE
T ss_pred ---------------------------------------------CCHHHHHHHHHHCC-CEEEEEecc
Confidence 12678888888888 988776543
No 124
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.29 E-value=1.3e-06 Score=79.48 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=65.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~ 133 (359)
...+|+|+|||+|..++.++ .. .|..+|+..|........+-+.... .. +.-+.+++.+-
T Consensus 70 ~~~~vLDiG~G~G~~~~~la--------~~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~~d~~~~ 132 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIK--------IC-------FPHLHVTIVDSLNKRITFLEKLSEALQLEN--TTFCHDRAETF 132 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHH--------HH-------CTTCEEEEEESCHHHHHHHHHHHHHHTCSS--EEEEESCHHHH
T ss_pred CCCEEEEecCCCCHHHHHHH--------Hh-------CCCCEEEEEeCCHHHHHHHHHHHHHcCCCC--EEEEeccHHHh
Confidence 45799999999999999884 22 2356899999877554443332211 11 22223455444
Q ss_pred CCC---CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 134 LFP---KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 134 l~p---~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
.++ ++++|+|+|... .|+..+|+.-++-|+|||++
T Consensus 133 ~~~~~~~~~fD~V~~~~~------------------------------------------~~~~~~l~~~~~~LkpgG~l 170 (240)
T 1xdz_A 133 GQRKDVRESYDIVTARAV------------------------------------------ARLSVLSELCLPLVKKNGLF 170 (240)
T ss_dssp TTCTTTTTCEEEEEEECC------------------------------------------SCHHHHHHHHGGGEEEEEEE
T ss_pred cccccccCCccEEEEecc------------------------------------------CCHHHHHHHHHHhcCCCCEE
Confidence 443 689999998541 03445788888999999999
Q ss_pred EEEe
Q 018250 211 VFSL 214 (359)
Q Consensus 211 vl~~ 214 (359)
++..
T Consensus 171 ~~~~ 174 (240)
T 1xdz_A 171 VALK 174 (240)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8863
No 125
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.29 E-value=9.3e-07 Score=79.28 Aligned_cols=110 Identities=13% Similarity=0.097 Sum_probs=71.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---Cc-ccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RK-YYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~-~~~~~vpgsfy~ 132 (359)
...+|+|+|||+|..++.++ +. .|...++..|+........-+.... .. -|+. ++..+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la--------~~-------~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~---~d~~~ 99 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMA--------KQ-------NPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLN---IDADT 99 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHH--------HH-------CTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEEC---CCGGG
T ss_pred CCceEEEEecCCCHHHHHHH--------HH-------CCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEe---CCHHH
Confidence 34689999999999999884 33 2567899999987665554433211 11 1222 34433
Q ss_pred --CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 133 --RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 133 --~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
..+|++++|.++++++..|...... +.++ ....||+.-++-|+|||++
T Consensus 100 l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~~rl-------------------~~~~~l~~~~~~LkpgG~l 149 (213)
T 2fca_A 100 LTDVFEPGEVKRVYLNFSDPWPKKRHE-----------KRRL-------------------TYSHFLKKYEEVMGKGGSI 149 (213)
T ss_dssp HHHHCCTTSCCEEEEESCCCCCSGGGG-----------GGST-------------------TSHHHHHHHHHHHTTSCEE
T ss_pred HHhhcCcCCcCEEEEECCCCCcCcccc-----------cccc-------------------CcHHHHHHHHHHcCCCCEE
Confidence 2378999999999888777432100 0000 1134777788999999999
Q ss_pred EEEe
Q 018250 211 VFSL 214 (359)
Q Consensus 211 vl~~ 214 (359)
++.+
T Consensus 150 ~~~t 153 (213)
T 2fca_A 150 HFKT 153 (213)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9987
No 126
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.24 E-value=7.9e-06 Score=75.14 Aligned_cols=123 Identities=14% Similarity=0.072 Sum_probs=69.7
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..++.++ ++ .+ .+++..|+........-+++..... -+.-+.+++.+..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la--------~~-------~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~ 112 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLS--------TR-------TK-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT 112 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHH--------TT-------CC-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG
T ss_pred CCCEEEEcCCchhHHHHHHH--------Hh-------cC-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh
Confidence 46799999999999988774 22 12 2899999977665544443321000 0112223554333
Q ss_pred --CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHH-HHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 135 --FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETF-QAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 135 --~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y-~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
++++++|+|+|+-.++..+.. ... ++....+. ......++..||+.-++-|+|||+|+
T Consensus 113 ~~~~~~~fD~Ii~npPy~~~~~~--~~~-----------------~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~ 173 (259)
T 3lpm_A 113 DLIPKERADIVTCNPPYFATPDT--SLK-----------------NTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKAN 173 (259)
T ss_dssp GTSCTTCEEEEEECCCC------------------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCCccEEEECCCCCCCccc--cCC-----------------CCchHHHhhhccccCCHHHHHHHHHHHccCCcEEE
Confidence 678999999997655443100 000 00000000 11123567889999999999999999
Q ss_pred EEe
Q 018250 212 FSL 214 (359)
Q Consensus 212 l~~ 214 (359)
+..
T Consensus 174 ~~~ 176 (259)
T 3lpm_A 174 FVH 176 (259)
T ss_dssp EEE
T ss_pred EEE
Confidence 965
No 127
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.23 E-value=2.9e-06 Score=74.21 Aligned_cols=115 Identities=16% Similarity=0.121 Sum_probs=70.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCC-
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRL- 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l- 134 (359)
..+|+|+|||+|..++.++ +.+. |..+++..|+........-+.+.... --+.-+-+++.+-.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~--------~~~~------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 88 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLA--------SLVG------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDK 88 (197)
T ss_dssp TCEEEESCCTTSHHHHHHH--------HHHC------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGG
T ss_pred CCEEEEcCCCCCHHHHHHH--------HHhC------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhh
Confidence 4699999999999998875 3321 33589999998766555443322100 01122234554433
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
++++++|+++++..+ +|..-. .+. .. ..|...+|+.-.+-|+|||++++..
T Consensus 89 ~~~~~fD~v~~~~~~-----~~~~~~----------~~~---~~-----------~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 89 YIDCPVKAVMFNLGY-----LPSGDH----------SIS---TR-----------PETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp TCCSCEEEEEEEESB-----CTTSCT----------TCB---CC-----------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCceEEEEcCCc-----ccCccc----------ccc---cC-----------cccHHHHHHHHHHhCcCCCEEEEEE
Confidence 567899999998666 121100 000 00 1144457888889999999999987
Q ss_pred c
Q 018250 215 I 215 (359)
Q Consensus 215 ~ 215 (359)
.
T Consensus 140 ~ 140 (197)
T 3eey_A 140 Y 140 (197)
T ss_dssp C
T ss_pred c
Confidence 5
No 128
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.23 E-value=3e-06 Score=81.65 Aligned_cols=103 Identities=19% Similarity=0.197 Sum_probs=65.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..++.++ +. +..+|+..|+.. .....-+.+.... --+.-+.+++.+..
T Consensus 64 ~~~~VLDiGcGtG~ls~~la--------~~--------g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 126 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAA--------KA--------GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH 126 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC
T ss_pred CCCEEEEeeccCcHHHHHHH--------Hc--------CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc
Confidence 34699999999999888774 21 124899999874 4433322221100 00112234565556
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
+|++++|+++|....+-+.. ..++..+|+.+.+-|+|||+++
T Consensus 127 ~~~~~~D~Ivs~~~~~~l~~-----------------------------------~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 LPVEKVDVIISEWMGYFLLF-----------------------------------ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCSCEEEEEECCCBTTBTT-----------------------------------TCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCcEEEEEEcCchhhccC-----------------------------------HHHHHHHHHHHHhhcCCCcEEE
Confidence 88899999999752221110 1255668889999999999998
No 129
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.23 E-value=4.5e-06 Score=75.75 Aligned_cols=152 Identities=17% Similarity=0.160 Sum_probs=82.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCC-CCchHHH---HHhCCC----CcccccccCc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHT-ENDFNTL---FRTLPP----RKYYAAGVPG 128 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp-~NDFn~l---f~~l~~----~~~~~~~vpg 128 (359)
...+|+|+|||+|..++.++ ++ .|..+|+..|+. .++.... -+.... +-.|..+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la--------~~-------~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~--- 85 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLA--------IN-------DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIA--- 85 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHH--------HT-------CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECC---
T ss_pred CCCEEEEEeccCcHHHHHHH--------Hh-------CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEc---
Confidence 35789999999999988874 22 356799999998 4443221 111111 1123332
Q ss_pred ccccCCCCC---CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018250 129 SFHGRLFPK---STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELV 205 (359)
Q Consensus 129 sfy~~l~p~---~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 205 (359)
+... + |. +.+|.+++++...++ ...-..+...+|+.-++-||
T Consensus 86 d~~~-l-~~~~~d~v~~i~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~r~Lk 130 (225)
T 3p2e_A 86 AAES-L-PFELKNIADSISILFPWGTL---------------------------------LEYVIKPNRDILSNVADLAK 130 (225)
T ss_dssp BTTB-C-CGGGTTCEEEEEEESCCHHH---------------------------------HHHHHTTCHHHHHHHHTTEE
T ss_pred CHHH-h-hhhccCeEEEEEEeCCCcHH---------------------------------hhhhhcchHHHHHHHHHhcC
Confidence 3322 1 32 556666665432221 00011233457778899999
Q ss_pred cCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCChhhhccCCccccCCCHHHHHHHHHhCCceeEeEEEE
Q 018250 206 PGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMGVISEEKARTFNVPAYFPYVEELESLIQRNGHFAMERMQQ 285 (359)
Q Consensus 206 pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eGli~~e~~d~f~~P~y~ps~~E~~~~i~~~G~F~i~~le~ 285 (359)
|||+|++.+....+. +.+...+. +. ....|.|++. +|+.+.++++| |++..++.
T Consensus 131 pGG~l~i~~~~~~~~------------~~~~~~~~-----~~-------~~~~~~~~~~-~el~~~l~~aG-f~v~~~~~ 184 (225)
T 3p2e_A 131 KEAHFEFVTTYSDSY------------EEAEIKKR-----GL-------PLLSKAYFLS-EQYKAELSNSG-FRIDDVKE 184 (225)
T ss_dssp EEEEEEEEECCCC--------------------------------------CCHHHHHS-HHHHHHHHHHT-CEEEEEEE
T ss_pred CCcEEEEEEeccccc------------hhchhhhc-----CC-------CCCChhhcch-HHHHHHHHHcC-CCeeeeee
Confidence 999999954322211 00000000 10 0112234333 46999999999 99999999
Q ss_pred ee
Q 018250 286 LD 287 (359)
Q Consensus 286 ~~ 287 (359)
+.
T Consensus 185 ~~ 186 (225)
T 3p2e_A 185 LD 186 (225)
T ss_dssp EC
T ss_pred cC
Confidence 85
No 130
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.22 E-value=1e-06 Score=86.35 Aligned_cols=109 Identities=14% Similarity=0.031 Sum_probs=69.5
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----CcccccccCcccccC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKYYAAGVPGSFHGR 133 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~~~~~vpgsfy~~ 133 (359)
..+|+|+|||+|..++.++ +. .|..+|+..|.........-++... ...-+..+.+++++
T Consensus 223 ~~~VLDlGcG~G~~s~~la--------~~-------~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLL--------DK-------NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS- 286 (375)
T ss_dssp CSEEEEETCTTCHHHHHHH--------HH-------CTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-
T ss_pred CCeEEEEeCcchHHHHHHH--------HH-------CCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-
Confidence 3799999999999999885 33 2457899999876554443333221 01111122345555
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.+|++++|+|+|+-.+|+...++.. ....||+.-.+-|+|||+++++
T Consensus 287 ~~~~~~fD~Ii~nppfh~~~~~~~~---------------------------------~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPPFHQQHALTDN---------------------------------VAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp TCCTTCEEEEEECCCC-------CC---------------------------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCCeeEEEECCCcccCcccCHH---------------------------------HHHHHHHHHHHhCCCCcEEEEE
Confidence 5688999999999999985443321 1224777788899999999997
Q ss_pred ec
Q 018250 214 LI 215 (359)
Q Consensus 214 ~~ 215 (359)
..
T Consensus 334 ~n 335 (375)
T 4dcm_A 334 AN 335 (375)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 131
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.22 E-value=1.8e-06 Score=76.31 Aligned_cols=97 Identities=14% Similarity=0.091 Sum_probs=66.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~ 133 (359)
...+|+|+|||+|..+..+.. . ..+++..|.........-+.+.. .. +.-+.++..+.
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~--------~---------~~~v~~vD~~~~~~~~a~~~~~~~~~~~--v~~~~~d~~~~ 137 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAH--------L---------VQHVCSVERIKGLQWQARRRLKNLDLHN--VSTRHGDGWQG 137 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHH--------H---------SSEEEEEESCHHHHHHHHHHHHHTTCCS--EEEEESCGGGC
T ss_pred CCCEEEEEcCCCCHHHHHHHH--------h---------CCEEEEEecCHHHHHHHHHHHHHcCCCc--eEEEECCcccC
Confidence 457999999999999988752 2 13788888876555444333221 11 11223466666
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
+.+++++|+|+++.++||+.+ . -.+-|+|||+|++.
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~~---~-----------------------------------------~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIPT---A-----------------------------------------LMTQLDEGGILVLP 173 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCCT---H-----------------------------------------HHHTEEEEEEEEEE
T ss_pred CccCCCccEEEEccchhhhhH---H-----------------------------------------HHHhcccCcEEEEE
Confidence 667789999999999998532 1 24679999999999
Q ss_pred ecc
Q 018250 214 LIT 216 (359)
Q Consensus 214 ~~g 216 (359)
+..
T Consensus 174 ~~~ 176 (210)
T 3lbf_A 174 VGE 176 (210)
T ss_dssp ECS
T ss_pred EcC
Confidence 876
No 132
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.20 E-value=2.3e-06 Score=78.22 Aligned_cols=111 Identities=17% Similarity=0.096 Sum_probs=66.7
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC--------CC-Cc-ccccc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL--------PP-RK-YYAAG 125 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l--------~~-~~-~~~~~ 125 (359)
.+..+|+|+|||+|..++.++ +. .|...++..|+........-+.+ .. .. -|+.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la--------~~-------~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~- 108 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELS--------PL-------FPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLR- 108 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHG--------GG-------STTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEE-
T ss_pred CCCCeEEEEccCCcHHHHHHH--------HH-------CCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEE-
Confidence 346789999999999998874 22 35678899998775544322110 01 11 1333
Q ss_pred cCccccc---CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 018250 126 VPGSFHG---RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAE 202 (359)
Q Consensus 126 vpgsfy~---~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 202 (359)
++... ..||++++|.+++++.-.|..+... +.++ ....||+.-++
T Consensus 109 --~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~-----------krr~-------------------~~~~~l~~~~~ 156 (235)
T 3ckk_A 109 --SNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKH-----------KWRI-------------------ISPTLLAEYAY 156 (235)
T ss_dssp --CCTTTCHHHHCCTTCEEEEEEESCC----------------------C-------------------CCHHHHHHHHH
T ss_pred --CcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhh-----------hhhh-------------------hhHHHHHHHHH
Confidence 23332 2378999999999887777432100 0000 11347778889
Q ss_pred hhccCceeEEEe
Q 018250 203 ELVPGGLMVFSL 214 (359)
Q Consensus 203 EL~pGG~lvl~~ 214 (359)
-|+|||+|++.+
T Consensus 157 ~LkpGG~l~~~t 168 (235)
T 3ckk_A 157 VLRVGGLVYTIT 168 (235)
T ss_dssp HEEEEEEEEEEE
T ss_pred HCCCCCEEEEEe
Confidence 999999999887
No 133
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.20 E-value=6e-06 Score=76.66 Aligned_cols=122 Identities=15% Similarity=0.181 Sum_probs=74.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|..++.++ +. .|..+++..|.........-++... .. +.-+.+++.+ .
T Consensus 110 ~~~vLDlG~GsG~~~~~la--------~~-------~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~--v~~~~~d~~~-~ 171 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALA--------SE-------RPDCEIIAVDRMPDAVSLAQRNAQHLAIKN--IHILQSDWFS-A 171 (276)
T ss_dssp CCEEEEETCTTSHHHHHHH--------HH-------CTTSEEEEECSSHHHHHHHHHHHHHHTCCS--EEEECCSTTG-G
T ss_pred CCEEEEecCCccHHHHHHH--------Hh-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCc--eEEEEcchhh-h
Confidence 4689999999999998874 22 2456899999876554443333211 11 1222345544 3
Q ss_pred CCCCceeEEEecCcccccCCCCc---ccccc-cccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPK---VNMLE-KSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~---~~~~~-~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
+|++++|+|+|+...+|... +. .+... ...++.. ......++..+++.-.+-|+|||++
T Consensus 172 ~~~~~fD~Iv~npPy~~~~~-~~l~~~v~~~~p~~al~~----------------~~~g~~~~~~~l~~~~~~LkpgG~l 234 (276)
T 2b3t_A 172 LAGQQFAMIVSNPPYIDEQD-PHLQQGDVRFEPLTALVA----------------ADSGMADIVHIIEQSRNALVSGGFL 234 (276)
T ss_dssp GTTCCEEEEEECCCCBCTTC-HHHHSSGGGSSCSTTTBC----------------HHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred cccCCccEEEECCCCCCccc-cccChhhhhcCcHHHHcC----------------CCcHHHHHHHHHHHHHHhcCCCCEE
Confidence 56789999999988877543 11 00000 0000000 0112346677898889999999999
Q ss_pred EEEe
Q 018250 211 VFSL 214 (359)
Q Consensus 211 vl~~ 214 (359)
++..
T Consensus 235 ~~~~ 238 (276)
T 2b3t_A 235 LLEH 238 (276)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9874
No 134
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.20 E-value=1.1e-06 Score=82.63 Aligned_cols=113 Identities=17% Similarity=0.225 Sum_probs=70.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC------------Cccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP------------RKYYAA 124 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~------------~~~~~~ 124 (359)
+..+|+|+|||||..+..++-. +.+..+.. ....+|+..|+........-+...+ .+||.-
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~----L~e~~~~~---~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~ 177 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAIT----LADALGMA---PGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMR 177 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHH----HHHHHCSC---TTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEE
T ss_pred CCcEEEEeeccCChhHHHHHHH----HHHhcccC---CCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhc
Confidence 3589999999999854333211 12332211 1147999999998776665544311 123311
Q ss_pred c--------------------cCcccccCCCC-CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHH
Q 018250 125 G--------------------VPGSFHGRLFP-KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHE 183 (359)
Q Consensus 125 ~--------------------vpgsfy~~l~p-~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~ 183 (359)
+ ..++..+..+| .+++|+|+|...|+|+.. +
T Consensus 178 ~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~--~-------------------------- 229 (274)
T 1af7_A 178 GTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDK--T-------------------------- 229 (274)
T ss_dssp CCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCH--H--------------------------
T ss_pred cccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCH--H--------------------------
Confidence 0 11223332244 578999999999999752 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 184 TFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 184 ~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
+....|+.-++-|+|||.|++
T Consensus 230 --------~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 230 --------TQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp --------HHHHHHHHHGGGEEEEEEEEE
T ss_pred --------HHHHHHHHHHHHhCCCcEEEE
Confidence 234567778899999999987
No 135
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.17 E-value=3.4e-06 Score=75.65 Aligned_cols=99 Identities=12% Similarity=-0.016 Sum_probs=61.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCch---HHHHHhCCCCcccccccCccccc-
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDF---NTLFRTLPPRKYYAAGVPGSFHG- 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDF---n~lf~~l~~~~~~~~~vpgsfy~- 132 (359)
...+|+|+|||+|..|..+. +..+ ..+|+..|+...+. ....+... +-.++. ++...
T Consensus 57 ~g~~VLDlGcGtG~~~~~la--------~~~~-------~~~V~gvD~s~~~l~~~~~~a~~~~-~v~~~~---~d~~~~ 117 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLA--------DIVD-------EGIIYAVEYSAKPFEKLLELVRERN-NIIPLL---FDASKP 117 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHH--------HHTT-------TSEEEEECCCHHHHHHHHHHHHHCS-SEEEEC---SCTTCG
T ss_pred CCCEEEEECCcCCHHHHHHH--------HHcC-------CCEEEEEECCHHHHHHHHHHHhcCC-CeEEEE---cCCCCc
Confidence 35699999999999988774 3321 34899999887532 22222222 111222 23322
Q ss_pred ---CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCce
Q 018250 133 ---RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGL 209 (359)
Q Consensus 133 ---~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 209 (359)
..++ +++|+++|+.+-++ +...+|+.-++-|||||+
T Consensus 118 ~~~~~~~-~~fD~V~~~~~~~~----------------------------------------~~~~~l~~~~r~LkpgG~ 156 (210)
T 1nt2_A 118 WKYSGIV-EKVDLIYQDIAQKN----------------------------------------QIEILKANAEFFLKEKGE 156 (210)
T ss_dssp GGTTTTC-CCEEEEEECCCSTT----------------------------------------HHHHHHHHHHHHEEEEEE
T ss_pred hhhcccc-cceeEEEEeccChh----------------------------------------HHHHHHHHHHHHhCCCCE
Confidence 1234 89999999721110 222356677889999999
Q ss_pred eEEEec
Q 018250 210 MVFSLI 215 (359)
Q Consensus 210 lvl~~~ 215 (359)
|++.+.
T Consensus 157 l~i~~~ 162 (210)
T 1nt2_A 157 VVIMVK 162 (210)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999964
No 136
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.17 E-value=5.3e-06 Score=74.85 Aligned_cols=100 Identities=14% Similarity=0.102 Sum_probs=63.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-Cc-ccccccCccccc--
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RK-YYAAGVPGSFHG-- 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~-~~~~~vpgsfy~-- 132 (359)
...+|+|+|||+|..+..++ +.+ +..+|+..|........+-+.... .. .++. +++..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la--------~~~-------~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~---~d~~~~~ 135 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVA--------DIA-------DKGIVYAIEYAPRIMRELLDACAERENIIPIL---GDANKPQ 135 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHH--------HHT-------TTSEEEEEESCHHHHHHHHHHTTTCTTEEEEE---CCTTCGG
T ss_pred CCCEEEEEcccCCHHHHHHH--------HHc-------CCcEEEEEECCHHHHHHHHHHhhcCCCeEEEE---CCCCCcc
Confidence 35789999999999998884 332 234889999887555444443322 11 2333 23333
Q ss_pred --CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 133 --RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 133 --~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
..++ +++|+++ |++.+ |. ....+|+.-.+-|+|||++
T Consensus 136 ~~~~~~-~~~D~v~-----~~~~~-~~----------------------------------~~~~~l~~~~~~LkpgG~l 174 (230)
T 1fbn_A 136 EYANIV-EKVDVIY-----EDVAQ-PN----------------------------------QAEILIKNAKWFLKKGGYG 174 (230)
T ss_dssp GGTTTS-CCEEEEE-----ECCCS-TT----------------------------------HHHHHHHHHHHHEEEEEEE
T ss_pred cccccC-ccEEEEE-----EecCC-hh----------------------------------HHHHHHHHHHHhCCCCcEE
Confidence 4455 7899998 44221 10 1234667778899999999
Q ss_pred EEEec
Q 018250 211 VFSLI 215 (359)
Q Consensus 211 vl~~~ 215 (359)
++++.
T Consensus 175 ~i~~~ 179 (230)
T 1fbn_A 175 MIAIK 179 (230)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99843
No 137
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.17 E-value=8.3e-07 Score=77.96 Aligned_cols=130 Identities=11% Similarity=-0.024 Sum_probs=65.1
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~ 135 (359)
....+|+|+|||+|..++.++ +. .|..+++..|+........-+.+.....-+.-+.+++.+ .+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~--------~~-------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~ 92 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIA--------LA-------CPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WL 92 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHH--------HH-------CTTEEEEEEECC-------------------CCHHHHHH-HH
T ss_pred CCCCEEEEecCCHhHHHHHHH--------Hh-------CCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hh
Confidence 346899999999999998885 33 235689999997765544333332211112222345555 55
Q ss_pred CC-----CceeEEEecCcccccCCCC---cccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 136 PK-----STLHVVNSFNAMHWLSKTP---KVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 136 p~-----~s~d~~~S~~alHWLs~~p---~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
++ +++|+|+++-.+++..... ..+.... .. ..... .......+..||+.-.+-|+||
T Consensus 93 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~-----~~-~~~~~---------~~~~~~~~~~~l~~~~~~Lkpg 157 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYE-----PR-LALDG---------GEDGLQFYRRMAALPPYVLARG 157 (215)
T ss_dssp HHHHHTTCCBSEEEECCCCCC---------------------------------------CTTHHHHHHHTCCGGGBCSS
T ss_pred hhhhhccCcccEEEECCCCCCCccccccChhhhccC-----cc-ccccC---------CCcHHHHHHHHHHHHHHHhcCC
Confidence 65 9999999987776644321 1111000 00 00000 0011223467888888999999
Q ss_pred ceeEEEecc
Q 018250 208 GLMVFSLIT 216 (359)
Q Consensus 208 G~lvl~~~g 216 (359)
|++++...+
T Consensus 158 G~l~~~~~~ 166 (215)
T 4dzr_A 158 RAGVFLEVG 166 (215)
T ss_dssp SEEEEEECT
T ss_pred CeEEEEEEC
Confidence 994444443
No 138
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.15 E-value=2.1e-06 Score=84.74 Aligned_cols=99 Identities=19% Similarity=0.210 Sum_probs=68.0
Q ss_pred cceEEEeecCC------CCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCccc
Q 018250 57 YTVRIADLGCS------VGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSF 130 (359)
Q Consensus 57 ~~~~IaDlGCs------~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsf 130 (359)
++.+|||+||| +|..|+.++ +++ .|..+|+..|+..++. + ..++--|+. |+.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la--------~~~------fP~a~V~GVDiSp~m~---~--~~~rI~fv~---GDa 273 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMW--------KSF------FPRGQIYGLDIMDKSH---V--DELRIRTIQ---GDQ 273 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHH--------HHH------CTTCEEEEEESSCCGG---G--CBTTEEEEE---CCT
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHH--------HHh------CCCCEEEEEECCHHHh---h--cCCCcEEEE---ecc
Confidence 46899999999 788888774 222 2457999999988762 1 111222333 344
Q ss_pred ccCCCC------CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018250 131 HGRLFP------KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEEL 204 (359)
Q Consensus 131 y~~l~p------~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 204 (359)
.+..|+ ++++|+|+|..+ ||. .|+..+|+.-.+-|
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdgs-H~~--------------------------------------~d~~~aL~el~rvL 314 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDGS-HIN--------------------------------------AHVRTSFAALFPHV 314 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECSC-CCH--------------------------------------HHHHHHHHHHGGGE
T ss_pred cccchhhhhhcccCCccEEEECCc-ccc--------------------------------------hhHHHHHHHHHHhc
Confidence 443355 689999999865 542 14456788888999
Q ss_pred ccCceeEEEecc
Q 018250 205 VPGGLMVFSLIT 216 (359)
Q Consensus 205 ~pGG~lvl~~~g 216 (359)
||||++++.-+-
T Consensus 315 KPGGvlVi~Dl~ 326 (419)
T 3sso_A 315 RPGGLYVIEDMW 326 (419)
T ss_dssp EEEEEEEEECGG
T ss_pred CCCeEEEEEecc
Confidence 999999997543
No 139
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.14 E-value=5.3e-07 Score=86.86 Aligned_cols=108 Identities=14% Similarity=0.147 Sum_probs=72.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPK 137 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~ 137 (359)
..+|+|+|||+|..++.++ +. .|..+++..|+........-+.+.....-..-+.+++.. +++
T Consensus 197 ~~~VLDlGcG~G~~~~~la--------~~-------~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~--~~~ 259 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFA--------RH-------SPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFS--EVK 259 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHH--------HH-------CTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT--TCC
T ss_pred CCeEEEecCccCHHHHHHH--------HH-------CCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccc--ccc
Confidence 3589999999999998874 33 245689999987655444333321100000112345544 347
Q ss_pred CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 138 STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 138 ~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
+++|+|+|+..+||.... ...+...+|+.-++-|+|||++++...
T Consensus 260 ~~fD~Iv~~~~~~~g~~~---------------------------------~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 260 GRFDMIISNPPFHDGMQT---------------------------------SLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp SCEEEEEECCCCCSSSHH---------------------------------HHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CCeeEEEECCCcccCccC---------------------------------CHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 899999999999983210 123567789999999999999999764
No 140
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.13 E-value=2.4e-06 Score=73.51 Aligned_cols=100 Identities=19% Similarity=0.226 Sum_probs=61.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..++.++. . . .+++..|.........-+.+..... -+..+.+++.+ .
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~--------~-------~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~ 94 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAG--------R-------V--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-A 94 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHT--------T-------S--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-H
T ss_pred CCCEEEEECCCCCHHHHHHHH--------h-------c--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-h
Confidence 357999999999999887741 1 1 4778888765444333222110000 01111234433 3
Q ss_pred CCC-CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 135 FPK-STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 135 ~p~-~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
+|+ +++|+++++..+|+ +..+|+.-.+-|+|||++++.
T Consensus 95 ~~~~~~~D~v~~~~~~~~-----------------------------------------~~~~l~~~~~~l~~gG~l~~~ 133 (192)
T 1l3i_A 95 LCKIPDIDIAVVGGSGGE-----------------------------------------LQEILRIIKDKLKPGGRIIVT 133 (192)
T ss_dssp HTTSCCEEEEEESCCTTC-----------------------------------------HHHHHHHHHHTEEEEEEEEEE
T ss_pred cccCCCCCEEEECCchHH-----------------------------------------HHHHHHHHHHhcCCCcEEEEE
Confidence 343 68999999766543 224677778899999999998
Q ss_pred ec
Q 018250 214 LI 215 (359)
Q Consensus 214 ~~ 215 (359)
..
T Consensus 134 ~~ 135 (192)
T 1l3i_A 134 AI 135 (192)
T ss_dssp EC
T ss_pred ec
Confidence 74
No 141
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.12 E-value=5.2e-06 Score=74.43 Aligned_cols=78 Identities=13% Similarity=0.040 Sum_probs=50.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..+..+.. .. .+++..|.........-+...... -+.-+.+++.+.+.+
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~--------~~---------~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~ 131 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAE--------IV---------DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYEE 131 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHH--------HS---------SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCGG
T ss_pred CCCEEEEEcCCCCHHHHHHHH--------Hc---------CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCccccccc
Confidence 356999999999999988852 21 367888876655444433333211 111223455443445
Q ss_pred CCceeEEEecCccccc
Q 018250 137 KSTLHVVNSFNAMHWL 152 (359)
Q Consensus 137 ~~s~d~~~S~~alHWL 152 (359)
++++|+|+++.++|++
T Consensus 132 ~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTL 147 (231)
T ss_dssp GCCEEEEEESSBBSSC
T ss_pred CCCccEEEECCcHHHH
Confidence 7899999999999884
No 142
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.12 E-value=3.2e-06 Score=77.00 Aligned_cols=105 Identities=14% Similarity=0.117 Sum_probs=63.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--c-ccccccCcccc--
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--K-YYAAGVPGSFH-- 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~-~~~~~vpgsfy-- 131 (359)
...+|||+|||+|.++..+. +. .| .+++.-|+.......+-+..... . .++. |+..
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~--------~~-------~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~---~~a~~~ 120 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQ--------EA-------PI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDV 120 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHT--------TS-------CE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHH
T ss_pred CCCeEEEECCCccHHHHHHH--------Hh-------CC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEe---ehHHhh
Confidence 45799999999999888763 11 12 36778888765544433322211 1 1122 2322
Q ss_pred cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 132 GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 132 ~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
..-+|++++|.++.-........ ....|...||+.-++-|||||+|+
T Consensus 121 ~~~~~~~~FD~i~~D~~~~~~~~---------------------------------~~~~~~~~~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 121 APTLPDGHFDGILYDTYPLSEET---------------------------------WHTHQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGG---------------------------------TTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred cccccccCCceEEEeeeecccch---------------------------------hhhcchhhhhhhhhheeCCCCEEE
Confidence 22378999999975322211100 011366678888899999999997
Q ss_pred EE
Q 018250 212 FS 213 (359)
Q Consensus 212 l~ 213 (359)
+.
T Consensus 168 f~ 169 (236)
T 3orh_A 168 YC 169 (236)
T ss_dssp EC
T ss_pred EE
Confidence 64
No 143
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.12 E-value=7.7e-06 Score=69.81 Aligned_cols=74 Identities=14% Similarity=0.084 Sum_probs=47.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc-cccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY-YAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~-~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|..++.++. +..+++..|.........-+.+..... -+.-+.+++.+ .+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~-----------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~ 96 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK-----------------RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VL 96 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT-----------------TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HG
T ss_pred CCCEEEEeCCCCCHHHHHHHh-----------------cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cc
Confidence 356999999999999988841 245889999876554444333211000 01122345555 66
Q ss_pred CCCceeEEEecCc
Q 018250 136 PKSTLHVVNSFNA 148 (359)
Q Consensus 136 p~~s~d~~~S~~a 148 (359)
|++++|+++++.+
T Consensus 97 ~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 97 DKLEFNKAFIGGT 109 (183)
T ss_dssp GGCCCSEEEECSC
T ss_pred cCCCCcEEEECCc
Confidence 7789999999766
No 144
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.09 E-value=1e-06 Score=80.83 Aligned_cols=104 Identities=10% Similarity=-0.005 Sum_probs=58.2
Q ss_pred chHHhhHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCce
Q 018250 19 SYAHNSQFQRGTVDAAKELVREAIVNKLDVGSYGYDNSYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQ 98 (359)
Q Consensus 19 sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~ 98 (359)
.|......|.+....++..++. +. .....+|+|+|||+|..|..+. +... |.-+
T Consensus 50 ~yr~w~~~~skla~~ll~~l~~-------~~-----l~~g~~VLDlG~GtG~~t~~la--------~~v~------~~G~ 103 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGLKT-------NP-----IRKGTKVLYLGAASGTTISHVS--------DIIE------LNGK 103 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTCSC-------CS-----CCTTCEEEEETCTTSHHHHHHH--------HHHT------TTSE
T ss_pred chhhhchHHHHHHHHHHhhhhh-------cC-----CCCCCEEEEEeecCCHHHHHHH--------HHhC------CCCE
Confidence 3777777888876554333311 11 1335899999999999988874 2221 3458
Q ss_pred EEecCCCCCchHHHH---HhCCCCcccccccCcccccCCCCCCceeEEEecCcc
Q 018250 99 VFFNDHTENDFNTLF---RTLPPRKYYAAGVPGSFHGRLFPKSTLHVVNSFNAM 149 (359)
Q Consensus 99 v~~nDLp~NDFn~lf---~~l~~~~~~~~~vpgsfy~~l~p~~s~d~~~S~~al 149 (359)
|+..|+...+...+. +..+ +-.++.+-...........+++|+++|..+.
T Consensus 104 V~avD~s~~~l~~l~~~a~~r~-nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 104 AYGVEFSPRVVRELLLVAQRRP-NIFPLLADARFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp EEEEECCHHHHHHHHHHHHHCT-TEEEEECCTTCGGGTTTTCCCEEEEEECCCC
T ss_pred EEEEECcHHHHHHHHHHhhhcC-CeEEEEcccccchhhhccccceEEEEecCCC
Confidence 999999876543222 1111 1112222111110111124689999998664
No 145
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.08 E-value=7e-06 Score=75.64 Aligned_cols=100 Identities=15% Similarity=0.095 Sum_probs=65.5
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCccccc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHG 132 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~ 132 (359)
....+|+|+|||+|..++.++ .. .|..+|+..|........+-+.... .. +.-+.++..+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la--------~~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~--v~~~~~d~~~ 141 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLK--------IV-------RPELELVLVDATRKKVAFVERAIEVLGLKG--ARALWGRAEV 141 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHH--------HH-------CTTCEEEEEESCHHHHHHHHHHHHHHTCSS--EEEEECCHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHH--------HH-------CCCCEEEEEECCHHHHHHHHHHHHHhCCCc--eEEEECcHHH
Confidence 346799999999999999884 22 2467899999887555444333211 11 2222334443
Q ss_pred CCC---CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCce
Q 018250 133 RLF---PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGL 209 (359)
Q Consensus 133 ~l~---p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 209 (359)
-.. +++++|+|+|.... ++..+++.-.+-|+|||+
T Consensus 142 ~~~~~~~~~~fD~I~s~a~~------------------------------------------~~~~ll~~~~~~LkpgG~ 179 (249)
T 3g89_A 142 LAREAGHREAYARAVARAVA------------------------------------------PLCVLSELLLPFLEVGGA 179 (249)
T ss_dssp HTTSTTTTTCEEEEEEESSC------------------------------------------CHHHHHHHHGGGEEEEEE
T ss_pred hhcccccCCCceEEEECCcC------------------------------------------CHHHHHHHHHHHcCCCeE
Confidence 332 35899999985321 234577778899999999
Q ss_pred eEEEe
Q 018250 210 MVFSL 214 (359)
Q Consensus 210 lvl~~ 214 (359)
+++..
T Consensus 180 l~~~~ 184 (249)
T 3g89_A 180 AVAMK 184 (249)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98765
No 146
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.08 E-value=6.5e-06 Score=71.64 Aligned_cols=117 Identities=19% Similarity=0.171 Sum_probs=68.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcC--CCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccC-
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNL--SLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGR- 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~--~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~- 133 (359)
...+|+|+|||+|..|+.++ ++++.. ....|..+|+..|+.... .++ .--+. ..+++...
T Consensus 22 ~~~~vLDlGcG~G~~~~~la--------~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~-~~~~~--~~~d~~~~~ 84 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAV--------QKVNAAGTDPSSPVGFVLGVDLLHIF------PLE-GATFL--CPADVTDPR 84 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHH--------HHTTTTCCCTTSCCCEEEEECSSCCC------CCT-TCEEE--CSCCTTSHH
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHhccccccccCCCceEEEEechhcc------cCC-CCeEE--EeccCCCHH
Confidence 35799999999999999885 332210 001233689999987621 011 11122 02333221
Q ss_pred -------CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018250 134 -------LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP 206 (359)
Q Consensus 134 -------l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 206 (359)
.++++++|+|+|..++||.-.. ..+ ..........+|+.-.+-|+|
T Consensus 85 ~~~~~~~~~~~~~fD~V~~~~~~~~~~~~---~~~------------------------~~~~~~~~~~~l~~~~~~Lkp 137 (196)
T 2nyu_A 85 TSQRILEVLPGRRADVILSDMAPNATGFR---DLD------------------------HDRLISLCLTLLSVTPDILQP 137 (196)
T ss_dssp HHHHHHHHSGGGCEEEEEECCCCCCCSCH---HHH------------------------HHHHHHHHHHHHHHHHHHEEE
T ss_pred HHHHHHHhcCCCCCcEEEeCCCCCCCCCc---ccC------------------------HHHHHHHHHHHHHHHHHHhcC
Confidence 2567799999998877763210 000 000112335677778899999
Q ss_pred CceeEEEeccC
Q 018250 207 GGLMVFSLITG 217 (359)
Q Consensus 207 GG~lvl~~~g~ 217 (359)
||+|++..+..
T Consensus 138 gG~lv~~~~~~ 148 (196)
T 2nyu_A 138 GGTFLCKTWAG 148 (196)
T ss_dssp EEEEEEEECCS
T ss_pred CCEEEEEecCC
Confidence 99999987643
No 147
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.07 E-value=3.8e-06 Score=80.48 Aligned_cols=103 Identities=18% Similarity=0.203 Sum_probs=65.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRLF 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l~ 135 (359)
..+|+|+|||+|..++.++ +. +..+|+..|+. .....+-+.+..... -+.-+.+++.+-.+
T Consensus 39 ~~~VLDiGcGtG~ls~~la--------~~--------g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 101 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAA--------KH--------GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHL 101 (328)
T ss_dssp TCEEEEETCTTSHHHHHHH--------HT--------CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCC
T ss_pred CCEEEEecCccHHHHHHHH--------HC--------CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccC
Confidence 4689999999999888764 21 12489999987 443333222211000 01122346655557
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
|++++|+++|....+.+... .++..+|+.+.+-|+|||+++.
T Consensus 102 ~~~~~D~Ivs~~~~~~l~~~-----------------------------------~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 102 PFPKVDIIISEWMGYFLLYE-----------------------------------SMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SSSCEEEEEECCCBTTBSTT-----------------------------------CCHHHHHHHHHHHEEEEEEEES
T ss_pred CCCcccEEEEeCchhhcccH-----------------------------------HHHHHHHHHHHhhcCCCeEEEE
Confidence 88999999997544433211 1345688888999999999973
No 148
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.07 E-value=5.5e-06 Score=73.43 Aligned_cols=81 Identities=12% Similarity=0.017 Sum_probs=50.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~ 133 (359)
...+|+|+|||+|..+..++ +.. .|..+++..|.........-+.+.. .. +.-+.+++...
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~--------~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~--v~~~~~d~~~~ 140 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTA--------EIV------GEDGLVVSIERIPELAEKAERTLRKLGYDN--VIVIVGDGTLG 140 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------CTTSEEEEEESCHHHHHHHHHHHHHHTCTT--EEEEESCGGGC
T ss_pred CCCEEEEECCCccHHHHHHH--------HHh------CCCCEEEEEeCCHHHHHHHHHHHHHcCCCC--eEEEECCcccC
Confidence 35699999999999998885 222 1335889999876554443332211 11 11122344333
Q ss_pred CCCCCceeEEEecCcccccC
Q 018250 134 LFPKSTLHVVNSFNAMHWLS 153 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs 153 (359)
+.+++++|+++++.++|++.
T Consensus 141 ~~~~~~fD~v~~~~~~~~~~ 160 (215)
T 2yxe_A 141 YEPLAPYDRIYTTAAGPKIP 160 (215)
T ss_dssp CGGGCCEEEEEESSBBSSCC
T ss_pred CCCCCCeeEEEECCchHHHH
Confidence 33378999999999999843
No 149
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.07 E-value=7.7e-07 Score=79.43 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=55.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC---CC-cccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP---PR-KYYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~---~~-~~~~~~vpgsfy~ 132 (359)
.+.+|+|+|||+|+.++.++ . ..|..++...|....+-.-.-+.+. .. .+-+. +.-.
T Consensus 49 ~~~~VLDlGCG~GplAl~l~--------~-------~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~----d~~~ 109 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQW--------N-------ENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFL----NKES 109 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHH--------C-------SSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEE----CCHH
T ss_pred CCCeEEEecCCCCHHHHHHH--------h-------cCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEe----cccc
Confidence 46899999999999999884 1 2567899999998755443333221 11 22111 2222
Q ss_pred CCCCCCceeEEEecCcccccCCCCc
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPK 157 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~ 157 (359)
. .|+.++|++.++..+|-|.+.+.
T Consensus 110 ~-~~~~~~DvVLa~k~LHlL~~~~~ 133 (200)
T 3fzg_A 110 D-VYKGTYDVVFLLKMLPVLKQQDV 133 (200)
T ss_dssp H-HTTSEEEEEEEETCHHHHHHTTC
T ss_pred c-CCCCCcChhhHhhHHHhhhhhHH
Confidence 2 58899999999999999855443
No 150
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.06 E-value=9.3e-06 Score=75.05 Aligned_cols=123 Identities=15% Similarity=0.151 Sum_probs=71.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---Ccc--cccccCcccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKY--YAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~--~~~~vpgsfy 131 (359)
...+|+|+|||+|..++.++ ++ .|..+++..|+-.......-+++.. ... -+.-+.+++.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la--------~~-------~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~ 100 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVA--------AR-------LEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVT 100 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHH--------HH-------CTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTT
T ss_pred CCCEEEEeCChHhHHHHHHH--------Hh-------CCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHH
Confidence 45799999999999998885 33 2346888888876555544444432 100 0111223554
Q ss_pred cC-------CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHH-HHHHHHHHHHHHHHh
Q 018250 132 GR-------LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQ-FRSDFESILNARAEE 203 (359)
Q Consensus 132 ~~-------l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q-~~~D~~~fL~~Ra~E 203 (359)
+- .++++++|+|+|+-.+++.... . +++..++.+.. ...++..||+.-++-
T Consensus 101 ~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~----~-----------------~~~~~~~~a~~~~~~~~~~~l~~~~~~ 159 (260)
T 2ozv_A 101 LRAKARVEAGLPDEHFHHVIMNPPYNDAGDR----R-----------------TPDALKAEAHAMTEGLFEDWIRTASAI 159 (260)
T ss_dssp CCHHHHHHTTCCTTCEEEEEECCCC------------------------------------------CCHHHHHHHHHHH
T ss_pred HHhhhhhhhccCCCCcCEEEECCCCcCCCCC----C-----------------CcCHHHHHHhhcCcCCHHHHHHHHHHH
Confidence 33 3678999999998655553200 0 01111111111 122477899999999
Q ss_pred hccCceeEEEec
Q 018250 204 LVPGGLMVFSLI 215 (359)
Q Consensus 204 L~pGG~lvl~~~ 215 (359)
|+|||+|++...
T Consensus 160 LkpgG~l~~~~~ 171 (260)
T 2ozv_A 160 MVSGGQLSLISR 171 (260)
T ss_dssp EEEEEEEEEEEC
T ss_pred cCCCCEEEEEEc
Confidence 999999999764
No 151
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.06 E-value=1.2e-05 Score=71.45 Aligned_cols=97 Identities=12% Similarity=0.069 Sum_probs=60.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---C-cccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---R-KYYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~-~~~~~~vpgsfy~ 132 (359)
...+|+|+|||+|..++.++. . ..+|+..|+........-+.... . . +.-+.+++.+
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~g~~~~--v~~~~~d~~~ 115 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCL--------A---------GGRAITIEPRADRIENIQKNIDTYGLSPR--MRAVQGTAPA 115 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHTTCTTT--EEEEESCTTG
T ss_pred CCCEEEEecCCCCHHHHHHHH--------c---------CCEEEEEeCCHHHHHHHHHHHHHcCCCCC--EEEEeCchhh
Confidence 357899999999999988852 1 24788888876554443332210 1 1 1112235544
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
.+.+..++|++++..++ +.. +|+.-.+-|+|||++++
T Consensus 116 ~~~~~~~~D~v~~~~~~------------------------------------------~~~-~l~~~~~~LkpgG~lv~ 152 (204)
T 3njr_A 116 ALADLPLPEAVFIGGGG------------------------------------------SQA-LYDRLWEWLAPGTRIVA 152 (204)
T ss_dssp GGTTSCCCSEEEECSCC------------------------------------------CHH-HHHHHHHHSCTTCEEEE
T ss_pred hcccCCCCCEEEECCcc------------------------------------------cHH-HHHHHHHhcCCCcEEEE
Confidence 34344578999875433 112 45566788999999999
Q ss_pred Eec
Q 018250 213 SLI 215 (359)
Q Consensus 213 ~~~ 215 (359)
...
T Consensus 153 ~~~ 155 (204)
T 3njr_A 153 NAV 155 (204)
T ss_dssp EEC
T ss_pred Eec
Confidence 875
No 152
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.05 E-value=3e-05 Score=82.62 Aligned_cols=110 Identities=11% Similarity=0.017 Sum_probs=75.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC----C--Ccc-cccccCcc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP----P--RKY-YAAGVPGS 129 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~----~--~~~-~~~~vpgs 129 (359)
...+|||+|||+|..++.++ +.. .|..+|+..|+...+-...-+.+. . ... -+.-+-|+
T Consensus 721 ~g~rVLDVGCGTG~lai~LA--------r~g------~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGD 786 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLL--------DYP------TSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGS 786 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHT--------SSC------CCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHH--------HhC------CCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECc
Confidence 35799999999999998874 211 234689999998866655544221 0 000 11122346
Q ss_pred cccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCce
Q 018250 130 FHGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGL 209 (359)
Q Consensus 130 fy~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 209 (359)
+.+..++++++|+|+++.++||+.. .+...||+.-.+-|+|| .
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~d------------------------------------p~l~~~L~eI~RvLKPG-~ 829 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEE------------------------------------DQACEFGEKVLSLFHPK-L 829 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTTCCS-E
T ss_pred hHhCCcccCCeeEEEEeCchhhCCh------------------------------------HHHHHHHHHHHHHcCCC-E
Confidence 7666788899999999999999642 12335777888999999 8
Q ss_pred eEEEeccC
Q 018250 210 MVFSLITG 217 (359)
Q Consensus 210 lvl~~~g~ 217 (359)
++++.+..
T Consensus 830 LIISTPN~ 837 (950)
T 3htx_A 830 LIVSTPNY 837 (950)
T ss_dssp EEEEECBG
T ss_pred EEEEecCc
Confidence 88887644
No 153
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.05 E-value=3e-06 Score=72.78 Aligned_cols=108 Identities=9% Similarity=-0.074 Sum_probs=64.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..++.++ ++ +..+++..|+.......+-+.+..... -+.-+.+++.+.+
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~--------~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAV--------SR--------GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI 94 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHH--------HT--------TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHH--------Hc--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH
Confidence 34689999999999998774 21 234899999877555544333321100 0112234554422
Q ss_pred -CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHH--HHhhccCceeE
Q 018250 135 -FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNAR--AEELVPGGLMV 211 (359)
Q Consensus 135 -~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~R--a~EL~pGG~lv 211 (359)
..++++|+++++..+|+- ++..+++.- .+-|+|||+++
T Consensus 95 ~~~~~~fD~i~~~~~~~~~---------------------------------------~~~~~~~~l~~~~~L~~gG~l~ 135 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAKE---------------------------------------TIVATIEALAAKNLLSEQVMVV 135 (177)
T ss_dssp HHBCSCEEEEEECCSSHHH---------------------------------------HHHHHHHHHHHTTCEEEEEEEE
T ss_pred HhhcCCCCEEEECCCCCcc---------------------------------------hHHHHHHHHHhCCCcCCCcEEE
Confidence 234679999997554430 111122222 47899999999
Q ss_pred EEeccCCC
Q 018250 212 FSLITGPS 219 (359)
Q Consensus 212 l~~~g~~~ 219 (359)
+.......
T Consensus 136 ~~~~~~~~ 143 (177)
T 2esr_A 136 CETDKTVL 143 (177)
T ss_dssp EEEETTCC
T ss_pred EEECCccc
Confidence 99876654
No 154
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.97 E-value=3.8e-06 Score=74.46 Aligned_cols=77 Identities=19% Similarity=0.057 Sum_probs=47.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc---cccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY---YAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~---~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|..++.++ .+. ..+|+..|+.......+-+.+..... -+.-+.+++.+.+
T Consensus 54 ~~~vLDlGcGtG~~~~~~~--------~~~--------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 117 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEAL--------SRQ--------AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL 117 (201)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HTT--------CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT
T ss_pred CCeEEEcCCccCHHHHHHH--------Hcc--------CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH
Confidence 3689999999999998764 111 13799999987666555443321000 1122234554433
Q ss_pred --CCCCc-eeEEEecCccc
Q 018250 135 --FPKST-LHVVNSFNAMH 150 (359)
Q Consensus 135 --~p~~s-~d~~~S~~alH 150 (359)
+++++ +|+|+++..+|
T Consensus 118 ~~~~~~~~fD~I~~~~~~~ 136 (201)
T 2ift_A 118 KQPQNQPHFDVVFLDPPFH 136 (201)
T ss_dssp TSCCSSCCEEEEEECCCSS
T ss_pred HhhccCCCCCEEEECCCCC
Confidence 24678 99999976654
No 155
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.96 E-value=2e-05 Score=75.50 Aligned_cols=111 Identities=14% Similarity=0.024 Sum_probs=71.3
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---Cc-ccccccCcccc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RK-YYAAGVPGSFH 131 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~-~~~~~vpgsfy 131 (359)
+++.+|||||||+|..+..++ +++ |..++...|+-.......-+.++. .+ -++.+-...|.
T Consensus 88 p~~~rVLdIG~G~G~la~~la--------~~~-------p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l 152 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARYFA--------DVY-------PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVA 152 (317)
T ss_dssp GGGCEEEEESCGGGHHHHHHH--------HHS-------TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHH
T ss_pred CCCCEEEEEECCcCHHHHHHH--------HHC-------CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHH
Confidence 446799999999999888774 332 455788888876544433333331 11 12333222222
Q ss_pred cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 132 GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 132 ~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
.. ++++++|+|++....+| ..|..+.. ..|++.-++-|+|||+|+
T Consensus 153 ~~-~~~~~fDvIi~D~~~~~--~~~~~L~t--------------------------------~efl~~~~r~LkpgGvlv 197 (317)
T 3gjy_A 153 ES-FTPASRDVIIRDVFAGA--ITPQNFTT--------------------------------VEFFEHCHRGLAPGGLYV 197 (317)
T ss_dssp HT-CCTTCEEEEEECCSTTS--CCCGGGSB--------------------------------HHHHHHHHHHEEEEEEEE
T ss_pred hh-ccCCCCCEEEECCCCcc--ccchhhhH--------------------------------HHHHHHHHHhcCCCcEEE
Confidence 22 46789999999877776 23332221 247888899999999999
Q ss_pred EEecc
Q 018250 212 FSLIT 216 (359)
Q Consensus 212 l~~~g 216 (359)
+....
T Consensus 198 ~~~~~ 202 (317)
T 3gjy_A 198 ANCGD 202 (317)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 99864
No 156
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.94 E-value=2.6e-05 Score=72.84 Aligned_cols=98 Identities=6% Similarity=-0.042 Sum_probs=64.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Ccc-cccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKY-YAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~-~~~~vpgsfy~ 132 (359)
..+|+|+|||+|..|+.++ +.. +. +|+..|+.......+-++... ..+ |+. ++..+
T Consensus 126 ~~~VLDlgcG~G~~~~~la--------~~~-------~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~---~D~~~ 186 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIA--------VYG-------KA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYN---MDNRD 186 (278)
T ss_dssp TCEEEETTCTTTTTHHHHH--------HHT-------CC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC---SCTTT
T ss_pred CCEEEEecccCCHHHHHHH--------HhC-------CC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEE---CCHHH
Confidence 4789999999999999885 221 22 799999987665554443221 112 333 35544
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
.+ +++++|++++. .|... ..||..-.+-|+|||++++
T Consensus 187 ~~-~~~~fD~Vi~~--------~p~~~----------------------------------~~~l~~~~~~LkpgG~l~~ 223 (278)
T 2frn_A 187 FP-GENIADRILMG--------YVVRT----------------------------------HEFIPKALSIAKDGAIIHY 223 (278)
T ss_dssp CC-CCSCEEEEEEC--------CCSSG----------------------------------GGGHHHHHHHEEEEEEEEE
T ss_pred hc-ccCCccEEEEC--------CchhH----------------------------------HHHHHHHHHHCCCCeEEEE
Confidence 33 37899999883 22111 1255566788999999999
Q ss_pred EeccC
Q 018250 213 SLITG 217 (359)
Q Consensus 213 ~~~g~ 217 (359)
.....
T Consensus 224 ~~~~~ 228 (278)
T 2frn_A 224 HNTVP 228 (278)
T ss_dssp EEEEE
T ss_pred EEeec
Confidence 88754
No 157
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.93 E-value=2.7e-05 Score=76.32 Aligned_cols=135 Identities=17% Similarity=0.165 Sum_probs=72.5
Q ss_pred cchHHhhHHHHHHHHHH-HHHHHHHHHhhhccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCC
Q 018250 18 CSYAHNSQFQRGTVDAA-KELVREAIVNKLDVGSYGYDNSYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPD 96 (359)
Q Consensus 18 ~sY~~nS~~Q~~~~~~~-~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~ 96 (359)
.||+..+..+.-.-+.. ...-++||..+... + +.-+|||+|||+|..|+..+ +. . .
T Consensus 50 ~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~--~-----~~k~VLDvG~GtGiLs~~Aa--------~a-G-------A 106 (376)
T 4hc4_A 50 ECYSDVSVHEEMIADRVRTDAYRLGILRNWAA--L-----RGKTVLDVGAGTGILSIFCA--------QA-G-------A 106 (376)
T ss_dssp CCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHH--H-----TTCEEEEETCTTSHHHHHHH--------HT-T-------C
T ss_pred hhccCcHHHHHHhCCHHHHHHHHHHHHhCHHh--c-----CCCEEEEeCCCccHHHHHHH--------Hh-C-------C
Confidence 37877765444322222 12224555432211 1 23479999999998887663 21 1 1
Q ss_pred ceEEecCCCCCchHHHHHhCCCC--cccccccCcccccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceee
Q 018250 97 FQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKC 174 (359)
Q Consensus 97 ~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~ 174 (359)
-.||..|.. +.....-+.+..+ .--+.-+.|+..+--+| ..+|+++|-+--+.|-
T Consensus 107 ~~V~ave~s-~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~--------------------- 163 (376)
T 4hc4_A 107 RRVYAVEAS-AIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLL--------------------- 163 (376)
T ss_dssp SEEEEEECS-TTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBT---------------------
T ss_pred CEEEEEeCh-HHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccccc---------------------
Confidence 378999964 3433222211111 00122233455343355 7899999932211111
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 175 TRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 175 ~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
.+..+..+|.+|.+-|+|||+|+-
T Consensus 164 --------------~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 164 --------------HESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp --------------TTCSHHHHHHHHHHHEEEEEEEES
T ss_pred --------------ccchhhhHHHHHHhhCCCCceECC
Confidence 012456689999999999999874
No 158
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.93 E-value=3.4e-05 Score=76.48 Aligned_cols=103 Identities=16% Similarity=0.079 Sum_probs=64.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHh------------CCCCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRT------------LPPRKYYAA 124 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~------------l~~~~~~~~ 124 (359)
...+|+|||||+|..++.++ ... +.-+++.-|+..+...-.-+. +.... +.
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA--------~~~-------g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~r--Ve 235 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVA--------AAT-------NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAE--YT 235 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHC-------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCE--EE
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HHC-------CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCC--eE
Confidence 45789999999999998885 221 122588888875433221111 10011 12
Q ss_pred ccCcccccCCCCC--CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 018250 125 GVPGSFHGRLFPK--STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAE 202 (359)
Q Consensus 125 ~vpgsfy~~l~p~--~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 202 (359)
-+-|+|.+..+++ .++|+|+++..++| | |...-|....+
T Consensus 236 fi~GD~~~lp~~d~~~~aDVVf~Nn~~F~----p-----------------------------------dl~~aL~Ei~R 276 (438)
T 3uwp_A 236 LERGDFLSEEWRERIANTSVIFVNNFAFG----P-----------------------------------EVDHQLKERFA 276 (438)
T ss_dssp EEECCTTSHHHHHHHHTCSEEEECCTTCC----H-----------------------------------HHHHHHHHHHT
T ss_pred EEECcccCCccccccCCccEEEEcccccC----c-----------------------------------hHHHHHHHHHH
Confidence 2235666555544 47999999887766 2 23334556778
Q ss_pred hhccCceeEEEec
Q 018250 203 ELVPGGLMVFSLI 215 (359)
Q Consensus 203 EL~pGG~lvl~~~ 215 (359)
.|||||++|++=.
T Consensus 277 vLKPGGrIVssE~ 289 (438)
T 3uwp_A 277 NMKEGGRIVSSKP 289 (438)
T ss_dssp TSCTTCEEEESSC
T ss_pred cCCCCcEEEEeec
Confidence 9999999998743
No 159
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.93 E-value=1.9e-05 Score=71.91 Aligned_cols=100 Identities=16% Similarity=0.097 Sum_probs=65.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~ 133 (359)
...+|+|+|||+|..+..++. .. .|..+++..|+........-+.+.. .. .+.-+.+++. .
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~--------~~------~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~-~v~~~~~d~~-~ 156 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLAN--------IV------GPEGRVVSYEIREDFAKLAWENIKWAGFDD-RVTIKLKDIY-E 156 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHH--------HH------CTTSEEEEECSCHHHHHHHHHHHHHHTCTT-TEEEECSCGG-G
T ss_pred CCCEEEEecCCchHHHHHHHH--------Hh------CCCeEEEEEecCHHHHHHHHHHHHHcCCCC-ceEEEECchh-h
Confidence 457899999999999998852 21 2356899999976555444333211 11 0222234665 4
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.+|++++|+++++. |.. ..+|+.-.+-|+|||++++.
T Consensus 157 ~~~~~~~D~v~~~~--------~~~-----------------------------------~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 157 GIEEENVDHVILDL--------PQP-----------------------------------ERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp CCCCCSEEEEEECS--------SCG-----------------------------------GGGHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCcCEEEECC--------CCH-----------------------------------HHHHHHHHHHcCCCCEEEEE
Confidence 48889999999832 211 02456667889999999987
Q ss_pred ec
Q 018250 214 LI 215 (359)
Q Consensus 214 ~~ 215 (359)
..
T Consensus 194 ~~ 195 (255)
T 3mb5_A 194 TP 195 (255)
T ss_dssp ES
T ss_pred EC
Confidence 64
No 160
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.92 E-value=6.4e-07 Score=81.09 Aligned_cols=81 Identities=15% Similarity=-0.054 Sum_probs=53.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRLF 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l~ 135 (359)
..+|+|+|||+|..++.+++ . ..+|+..|+.......+-+.+.... --+.-+-+++.+.+
T Consensus 79 ~~~vLD~gcG~G~~~~~la~--------~---------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 140 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFAL--------T---------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA- 140 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-
T ss_pred CCEEEECccccCHHHHHHHH--------c---------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-
Confidence 57899999999999998852 1 1488999988766555443332100 01112224554433
Q ss_pred CCCceeEEEecCcccccCCCC
Q 018250 136 PKSTLHVVNSFNAMHWLSKTP 156 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p 156 (359)
+++++|+|+++..+||.....
T Consensus 141 ~~~~~D~v~~~~~~~~~~~~~ 161 (241)
T 3gdh_A 141 SFLKADVVFLSPPWGGPDYAT 161 (241)
T ss_dssp GGCCCSEEEECCCCSSGGGGG
T ss_pred ccCCCCEEEECCCcCCcchhh
Confidence 778999999999999976544
No 161
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.91 E-value=2.6e-05 Score=71.04 Aligned_cols=42 Identities=17% Similarity=-0.006 Sum_probs=29.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHH
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNT 111 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~ 111 (359)
...+|+|+|||+|..++.++..+ +. +..+|+..|+.......
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~------~~-------~~~~v~gvDis~~~l~~ 92 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLH------RR-------SLRQVIASDVDPAPLEL 92 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHT------GG-------GEEEEEEEESCHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHh------cc-------CCCeEEEEECCHHHHHH
Confidence 46899999999998888775321 01 23589999987654433
No 162
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.91 E-value=1.6e-05 Score=71.60 Aligned_cols=102 Identities=15% Similarity=0.078 Sum_probs=63.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCc---hHHHHHhCCCCcccccccCccccc-
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTEND---FNTLFRTLPPRKYYAAGVPGSFHG- 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~ND---Fn~lf~~l~~~~~~~~~vpgsfy~- 132 (359)
...+|+|+|||+|..+..++ +.+ .|..+|+..|+.... .....+..+ +-.|.. +++.+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la--------~~~------g~~~~v~gvD~s~~~i~~~~~~a~~~~-~v~~~~---~d~~~~ 138 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVS--------DIV------GPDGLVYAVEFSHRSGRDLINLAKKRT-NIIPVI---EDARHP 138 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------CTTCEEEEECCCHHHHHHHHHHHHHCT-TEEEEC---SCTTCG
T ss_pred CCCEEEEEcccCCHHHHHHH--------HHh------CCCcEEEEEECCHHHHHHHHHHhhccC-CeEEEE---cccCCh
Confidence 35699999999999999885 332 133588999987543 222222221 111222 34433
Q ss_pred --CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 133 --RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 133 --~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
..++++++|++++..+ .|. ....++..-.+-|+|||++
T Consensus 139 ~~~~~~~~~~D~V~~~~~------~~~----------------------------------~~~~~~~~~~~~LkpgG~l 178 (233)
T 2ipx_A 139 HKYRMLIAMVDVIFADVA------QPD----------------------------------QTRIVALNAHTFLRNGGHF 178 (233)
T ss_dssp GGGGGGCCCEEEEEECCC------CTT----------------------------------HHHHHHHHHHHHEEEEEEE
T ss_pred hhhcccCCcEEEEEEcCC------Ccc----------------------------------HHHHHHHHHHHHcCCCeEE
Confidence 2246789999999543 010 1223566668899999999
Q ss_pred EEEecc
Q 018250 211 VFSLIT 216 (359)
Q Consensus 211 vl~~~g 216 (359)
++.+..
T Consensus 179 ~i~~~~ 184 (233)
T 2ipx_A 179 VISIKA 184 (233)
T ss_dssp EEEEEH
T ss_pred EEEEcc
Confidence 997754
No 163
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.90 E-value=1e-05 Score=77.35 Aligned_cols=157 Identities=8% Similarity=-0.018 Sum_probs=65.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC---------C-C--cccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP---------P-R--KYYAAG 125 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~---------~-~--~~~~~~ 125 (359)
..+|+|+|||+|..|+.++. .. .|..+|+..|+........-+.+. . . .--+.-
T Consensus 106 g~~VLDiG~G~G~~~~~la~--------~~------g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~ 171 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSK--------AV------GSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDF 171 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHH--------HH------CTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEE
T ss_pred CCEEEEeCCCcCHHHHHHHH--------Hh------CCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEE
Confidence 46999999999999998852 22 134588888886543333222211 0 0 001122
Q ss_pred cCcccccC--CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018250 126 VPGSFHGR--LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEE 203 (359)
Q Consensus 126 vpgsfy~~--l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~E 203 (359)
+.+++.+. -++++++|+|++...-+|. +|..-.+-
T Consensus 172 ~~~d~~~~~~~~~~~~fD~V~~~~~~~~~-------------------------------------------~l~~~~~~ 208 (336)
T 2b25_A 172 IHKDISGATEDIKSLTFDAVALDMLNPHV-------------------------------------------TLPVFYPH 208 (336)
T ss_dssp EESCTTCCC-------EEEEEECSSSTTT-------------------------------------------THHHHGGG
T ss_pred EECChHHcccccCCCCeeEEEECCCCHHH-------------------------------------------HHHHHHHh
Confidence 23455444 3577899999985432221 34556789
Q ss_pred hccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHHHHHHHcC--CCChhhhccCCccccC----CCHHHHHHHHHhCCc
Q 018250 204 LVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCLWDLAKMG--VISEEKARTFNVPAYF----PYVEELESLIQRNGH 277 (359)
Q Consensus 204 L~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al~~lv~eG--li~~e~~d~f~~P~y~----ps~~E~~~~i~~~G~ 277 (359)
|+|||+|++..... +.+...+..|...+ ...+.........|.. +...++...++++|
T Consensus 209 LkpgG~lv~~~~~~---------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~g~y~~~l~~aG- 272 (336)
T 2b25_A 209 LKHGGVCAVYVVNI---------------TQVIELLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKI- 272 (336)
T ss_dssp EEEEEEEEEEESSH---------------HHHHHHHHHHHHHTCCEEEEEEECCCCCCEEECC-----------------
T ss_pred cCCCcEEEEEeCCH---------------HHHHHHHHHHHhcCCCcccceEEEecccceEEEeecccccchhhhhcccc-
Confidence 99999999777421 12222333333211 1111111112222222 23348999999999
Q ss_pred eeEeEEEEee
Q 018250 278 FAMERMQQLD 287 (359)
Q Consensus 278 F~i~~le~~~ 287 (359)
|++.+++...
T Consensus 273 F~~v~~~~~~ 282 (336)
T 2b25_A 273 NTDVQLDSQE 282 (336)
T ss_dssp ----------
T ss_pred cccccccccc
Confidence 9988877765
No 164
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.90 E-value=1.2e-05 Score=70.74 Aligned_cols=98 Identities=11% Similarity=0.005 Sum_probs=64.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|..++.++ +. .|..+++..|........+-+.... .. +.-+.+++.+ +
T Consensus 66 ~~~vLDiG~G~G~~~~~l~--------~~-------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~--v~~~~~d~~~-~ 127 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLS--------IV-------RPEAHFTLLDSLGKRVRFLRQVQHELKLEN--IEPVQSRVEE-F 127 (207)
T ss_dssp SSEEEEETCTTTTTHHHHH--------HH-------CTTSEEEEEESCHHHHHHHHHHHHHTTCSS--EEEEECCTTT-S
T ss_pred CCeEEEECCCCCHHHHHHH--------HH-------CCCCEEEEEeCCHHHHHHHHHHHHHcCCCC--eEEEecchhh-C
Confidence 4689999999999999884 22 2356899999876554443332211 11 2222345533 3
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
.|++++|+++|+.. .++..+|+.-++-|+|||++++..
T Consensus 128 ~~~~~~D~i~~~~~------------------------------------------~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 128 PSEPPFDGVISRAF------------------------------------------ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp CCCSCEEEEECSCS------------------------------------------SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred CccCCcCEEEEecc------------------------------------------CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 36789999998421 023457777889999999999985
Q ss_pred c
Q 018250 215 I 215 (359)
Q Consensus 215 ~ 215 (359)
.
T Consensus 166 ~ 166 (207)
T 1jsx_A 166 G 166 (207)
T ss_dssp S
T ss_pred C
Confidence 3
No 165
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.87 E-value=1e-05 Score=72.38 Aligned_cols=105 Identities=13% Similarity=0.068 Sum_probs=66.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc------ccccccCcccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK------YYAAGVPGSFH 131 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~------~~~~~vpgsfy 131 (359)
..+|+|+|||+|..+..+. +.... ...|..+|+..|.........-+.+.... --+.-+.++..
T Consensus 81 ~~~VLdiG~G~G~~~~~la--------~~~~~--~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 150 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMA--------IKMNV--LENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIY 150 (227)
T ss_dssp TCEEEEESCTTSHHHHHHH--------HHTTT--TTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGG
T ss_pred CCEEEEECCCCCHHHHHHH--------HHhcc--cCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChH
Confidence 4799999999999988774 22210 01245689999987654443333221100 00111223555
Q ss_pred cCC----CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 132 GRL----FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 132 ~~l----~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
+.+ ++.+++|+|++..++|++ +. .-.+-|+||
T Consensus 151 ~~~~~~~~~~~~fD~I~~~~~~~~~---~~-----------------------------------------~~~~~Lkpg 186 (227)
T 2pbf_A 151 QVNEEEKKELGLFDAIHVGASASEL---PE-----------------------------------------ILVDLLAEN 186 (227)
T ss_dssp GCCHHHHHHHCCEEEEEECSBBSSC---CH-----------------------------------------HHHHHEEEE
T ss_pred hcccccCccCCCcCEEEECCchHHH---HH-----------------------------------------HHHHhcCCC
Confidence 544 556889999999998873 21 235679999
Q ss_pred ceeEEEecc
Q 018250 208 GLMVFSLIT 216 (359)
Q Consensus 208 G~lvl~~~g 216 (359)
|+|++.+..
T Consensus 187 G~lv~~~~~ 195 (227)
T 2pbf_A 187 GKLIIPIEE 195 (227)
T ss_dssp EEEEEEEEE
T ss_pred cEEEEEEcc
Confidence 999999875
No 166
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.86 E-value=1.6e-05 Score=75.48 Aligned_cols=80 Identities=13% Similarity=-0.027 Sum_probs=51.8
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~ 133 (359)
...+|+|+|||+|..++.++ +... ...+|+..|+........-+.+.. .. +.-+.+++.+.
T Consensus 75 ~~~~VLDiGcG~G~~~~~la--------~~~~------~~~~v~gvD~s~~~~~~a~~~~~~~g~~~--v~~~~~d~~~~ 138 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMS--------RVVG------EKGLVVSVEYSRKICEIAKRNVERLGIEN--VIFVCGDGYYG 138 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHHC------TTCEEEEEESCHHHHHHHHHHHHHTTCCS--EEEEESCGGGC
T ss_pred CcCEEEEecCCchHHHHHHH--------HhcC------CCCEEEEEECCHHHHHHHHHHHHHcCCCC--eEEEECChhhc
Confidence 35699999999999998875 2221 124789999876555443333211 11 12223455554
Q ss_pred CCCCCceeEEEecCccccc
Q 018250 134 LFPKSTLHVVNSFNAMHWL 152 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWL 152 (359)
+.+++++|+|+|..++|++
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp CGGGCCEEEEEECSBBSCC
T ss_pred cccCCCeEEEEEcCCHHHH
Confidence 5567899999999999984
No 167
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.85 E-value=3.2e-05 Score=73.27 Aligned_cols=108 Identities=13% Similarity=-0.041 Sum_probs=64.7
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC-------CCc-ccccccC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP-------PRK-YYAAGVP 127 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~-------~~~-~~~~~vp 127 (359)
+.+.+|||+|||+|..+..++ +. .+..+++..|+........-+.++ ..+ -++.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~--- 155 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVL--------RH-------GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV--- 155 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHH--------TC-------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---
T ss_pred CCCCeEEEEcCCCCHHHHHHH--------hC-------CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE---
Confidence 345799999999999988774 11 234588888887654443333331 011 1222
Q ss_pred cccccCCC--CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018250 128 GSFHGRLF--PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELV 205 (359)
Q Consensus 128 gsfy~~l~--p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 205 (359)
+++.+-+. +++++|+|++....++.. +..+. -..||+.-++-|+
T Consensus 156 ~D~~~~~~~~~~~~fDvIi~d~~~~~~~--~~~l~--------------------------------~~~~l~~~~~~Lk 201 (304)
T 3bwc_A 156 GDGLAFVRQTPDNTYDVVIIDTTDPAGP--ASKLF--------------------------------GEAFYKDVLRILK 201 (304)
T ss_dssp SCHHHHHHSSCTTCEEEEEEECC-----------C--------------------------------CHHHHHHHHHHEE
T ss_pred CcHHHHHHhccCCceeEEEECCCCcccc--chhhh--------------------------------HHHHHHHHHHhcC
Confidence 34433332 578999999987766521 11110 0247777889999
Q ss_pred cCceeEEEec
Q 018250 206 PGGLMVFSLI 215 (359)
Q Consensus 206 pGG~lvl~~~ 215 (359)
|||+|++...
T Consensus 202 pgG~lv~~~~ 211 (304)
T 3bwc_A 202 PDGICCNQGE 211 (304)
T ss_dssp EEEEEEEEEC
T ss_pred CCcEEEEecC
Confidence 9999999853
No 168
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.85 E-value=6.5e-05 Score=66.27 Aligned_cols=106 Identities=11% Similarity=0.027 Sum_probs=62.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCC--
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRL-- 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l-- 134 (359)
...+|+|+|||+|..|..+++ + ..+|+..|+.... .++ .-.++ -|++.+..
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~--------~---------~~~V~gvD~~~~~------~~~-~v~~~---~~D~~~~~~~ 77 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNS--------L---------ARKIISIDLQEME------EIA-GVRFI---RCDIFKETIF 77 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTT--------T---------CSEEEEEESSCCC------CCT-TCEEE---ECCTTSSSHH
T ss_pred CCCEEEEEeecCCHHHHHHHH--------c---------CCcEEEEeccccc------cCC-CeEEE---EccccCHHHH
Confidence 457999999999999988742 1 2478888886531 011 11122 23443321
Q ss_pred ------CC---CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018250 135 ------FP---KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELV 205 (359)
Q Consensus 135 ------~p---~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 205 (359)
++ .+++|+|+|..+..+.-. ... .. ..........|+.-.+-|+
T Consensus 78 ~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~------------------------~~~-d~--~~~~~l~~~~l~~a~~~Lk 130 (191)
T 3dou_A 78 DDIDRALREEGIEKVDDVVSDAMAKVSGI------------------------PSR-DH--AVSYQIGQRVMEIAVRYLR 130 (191)
T ss_dssp HHHHHHHHHHTCSSEEEEEECCCCCCCSC------------------------HHH-HH--HHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHhhcccCCcceEEecCCCcCCCCC------------------------ccc-CH--HHHHHHHHHHHHHHHHHcc
Confidence 22 148999999765433110 000 00 0112234566777789999
Q ss_pred cCceeEEEecc
Q 018250 206 PGGLMVFSLIT 216 (359)
Q Consensus 206 pGG~lvl~~~g 216 (359)
|||+|++..+.
T Consensus 131 pGG~lv~k~~~ 141 (191)
T 3dou_A 131 NGGNVLLKQFQ 141 (191)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCEEEEEEcC
Confidence 99999998874
No 169
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.83 E-value=1.1e-05 Score=71.45 Aligned_cols=78 Identities=12% Similarity=0.009 Sum_probs=47.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc-cccccCcccccCC-C
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY-YAAGVPGSFHGRL-F 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~-~~~~vpgsfy~~l-~ 135 (359)
..+|+|+|||+|..++.++ .+. ..+|+..|+.......+-+.+..... -+.-+-+++.+.+ .
T Consensus 55 ~~~vLDlgcG~G~~~~~l~--------~~~--------~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~ 118 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEAL--------SRY--------AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ 118 (202)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HTT--------CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS
T ss_pred CCeEEEeCCCcCHHHHHHH--------hcC--------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh
Confidence 3689999999999998764 111 12789999887666555443321100 0111223544422 3
Q ss_pred CCCceeEEEecCcccc
Q 018250 136 PKSTLHVVNSFNAMHW 151 (359)
Q Consensus 136 p~~s~d~~~S~~alHW 151 (359)
+++++|+|+++..+|+
T Consensus 119 ~~~~fD~V~~~~p~~~ 134 (202)
T 2fpo_A 119 KGTPHNIVFVDPPFRR 134 (202)
T ss_dssp CCCCEEEEEECCSSST
T ss_pred cCCCCCEEEECCCCCC
Confidence 6789999999766553
No 170
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.83 E-value=7.1e-06 Score=70.63 Aligned_cols=78 Identities=10% Similarity=-0.118 Sum_probs=46.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..++.++ +. +..+|+..|+........-+.+..... -+.-+.+++.+.+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~--------~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 107 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV--------SR--------GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRAL 107 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH--------HT--------TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH
T ss_pred CCCCEEEeCCccCHHHHHHH--------Hc--------CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHH
Confidence 34699999999999998764 11 124899999876554443333211000 0111223544322
Q ss_pred ----CCCCceeEEEecCccc
Q 018250 135 ----FPKSTLHVVNSFNAMH 150 (359)
Q Consensus 135 ----~p~~s~d~~~S~~alH 150 (359)
++++++|+++++..+|
T Consensus 108 ~~~~~~~~~fD~i~~~~~~~ 127 (187)
T 2fhp_A 108 EQFYEEKLQFDLVLLDPPYA 127 (187)
T ss_dssp HHHHHTTCCEEEEEECCCGG
T ss_pred HHHHhcCCCCCEEEECCCCC
Confidence 2378999999976655
No 171
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.83 E-value=0.00013 Score=68.89 Aligned_cols=110 Identities=12% Similarity=-0.037 Sum_probs=66.2
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC--------Cc-cccccc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP--------RK-YYAAGV 126 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~--------~~-~~~~~v 126 (359)
+++.+|||+|||+|..+..++ +. .+..+|+..|+-.......-+.++. .+ -++.+-
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D 146 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVT--------RH-------KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDD 146 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHH--------TC-------TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSC
T ss_pred CCCCEEEEEeCChhHHHHHHH--------hC-------CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEECh
Confidence 346899999999999888774 21 2346899999988666554444321 11 133332
Q ss_pred CcccccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018250 127 PGSFHGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP 206 (359)
Q Consensus 127 pgsfy~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 206 (359)
...|.. .+++++|+|++...-+|.. +..+ .-..|++.-++-|+|
T Consensus 147 ~~~~l~--~~~~~fDvIi~D~~~p~~~--~~~l--------------------------------~~~~f~~~~~~~Lkp 190 (294)
T 3adn_A 147 GVNFVN--QTSQTFDVIISDCTDPIGP--GESL--------------------------------FTSAFYEGCKRCLNP 190 (294)
T ss_dssp SCC-----CCCCCEEEEEECC--------------------------------------------CCHHHHHHHHHTEEE
T ss_pred HHHHHh--hcCCCccEEEECCCCccCc--chhc--------------------------------cHHHHHHHHHHhcCC
Confidence 222221 2578999999976655511 1000 013477788999999
Q ss_pred CceeEEEecc
Q 018250 207 GGLMVFSLIT 216 (359)
Q Consensus 207 GG~lvl~~~g 216 (359)
||+|++....
T Consensus 191 gG~lv~~~~s 200 (294)
T 3adn_A 191 GGIFVAQNGV 200 (294)
T ss_dssp EEEEEEEEEE
T ss_pred CCEEEEecCC
Confidence 9999998743
No 172
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.82 E-value=1.9e-05 Score=70.56 Aligned_cols=79 Identities=13% Similarity=-0.035 Sum_probs=48.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC--------CcccccccCc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP--------RKYYAAGVPG 128 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~--------~~~~~~~vpg 128 (359)
...+|+|+|||+|..|..++ +.+ .+..+|+..|+........-+.+.. .. +..+-+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la--------~~~------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~--v~~~~~ 140 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFA--------RMV------GCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGR--VQLVVG 140 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH------CTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSS--EEEEES
T ss_pred CCCEEEEEcCCcCHHHHHHH--------HHh------CCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCc--EEEEEC
Confidence 35799999999999998874 222 1235888899876544433322211 01 111123
Q ss_pred ccccCCCCCCceeEEEecCcccc
Q 018250 129 SFHGRLFPKSTLHVVNSFNAMHW 151 (359)
Q Consensus 129 sfy~~l~p~~s~d~~~S~~alHW 151 (359)
+......+++++|+|++...++.
T Consensus 141 d~~~~~~~~~~fD~i~~~~~~~~ 163 (226)
T 1i1n_A 141 DGRMGYAEEAPYDAIHVGAAAPV 163 (226)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSS
T ss_pred CcccCcccCCCcCEEEECCchHH
Confidence 44444445788999999887754
No 173
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.81 E-value=3.8e-05 Score=70.85 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=65.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC----cccccccCcccccC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR----KYYAAGVPGSFHGR 133 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~----~~~~~~vpgsfy~~ 133 (359)
..+|+|+|||+|..+..++ +.. .|..+++..|+........-+.+... .--+.-+.+++.+.
T Consensus 100 ~~~vLdiG~G~G~~~~~l~--------~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLL--------RAV------GPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp TCEEEEECCTTSHHHHHHH--------HHH------CTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred CCEEEEEcccccHHHHHHH--------HHh------CCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 4689999999999998885 221 13468999998765444333322100 00122233566666
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
.++++++|++++...-.| .+|+.-.+-|+|||++++.
T Consensus 166 ~~~~~~~D~v~~~~~~~~-------------------------------------------~~l~~~~~~L~pgG~l~~~ 202 (280)
T 1i9g_A 166 ELPDGSVDRAVLDMLAPW-------------------------------------------EVLDAVSRLLVAGGVLMVY 202 (280)
T ss_dssp CCCTTCEEEEEEESSCGG-------------------------------------------GGHHHHHHHEEEEEEEEEE
T ss_pred CCCCCceeEEEECCcCHH-------------------------------------------HHHHHHHHhCCCCCEEEEE
Confidence 678899999998322111 1466667889999999998
Q ss_pred ec
Q 018250 214 LI 215 (359)
Q Consensus 214 ~~ 215 (359)
..
T Consensus 203 ~~ 204 (280)
T 1i9g_A 203 VA 204 (280)
T ss_dssp ES
T ss_pred eC
Confidence 85
No 174
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.81 E-value=2.6e-05 Score=74.07 Aligned_cols=98 Identities=9% Similarity=-0.032 Sum_probs=64.2
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----CcccccccCcccc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKYYAAGVPGSFH 131 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~~~~~vpgsfy 131 (359)
....+|||+|||+|+.|..++. + .+..+|+.-|+....-...-+.+.. +--|+. |++.
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA--------~-------~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~---gDa~ 182 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLS--------H-------VYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVIT---GDET 182 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHH--------H-------TTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEE---SCGG
T ss_pred CCcCEEEEECCCccHHHHHHHH--------H-------ccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEE---Cchh
Confidence 3468999999999998866641 2 1346899999877554433322211 112333 3444
Q ss_pred cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 132 GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 132 ~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
+ +|++++|+|++... +| |...+|+.-.+-|+|||+|+
T Consensus 183 ~--l~d~~FDvV~~~a~------~~-----------------------------------d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 183 V--IDGLEFDVLMVAAL------AE-----------------------------------PKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp G--GGGCCCSEEEECTT------CS-----------------------------------CHHHHHHHHHHHCCTTCEEE
T ss_pred h--CCCCCcCEEEECCC------cc-----------------------------------CHHHHHHHHHHHcCCCcEEE
Confidence 4 46899999998543 11 23347777889999999999
Q ss_pred EEe
Q 018250 212 FSL 214 (359)
Q Consensus 212 l~~ 214 (359)
+..
T Consensus 220 v~~ 222 (298)
T 3fpf_A 220 YRT 222 (298)
T ss_dssp EEE
T ss_pred EEc
Confidence 876
No 175
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.80 E-value=1.5e-05 Score=71.94 Aligned_cols=76 Identities=14% Similarity=0.124 Sum_probs=46.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|..+..++ +.. + .+++..|.........-+.+.. .. +.-+.+++ ...
T Consensus 92 ~~~vLdiG~G~G~~~~~la--------~~~-------~-~~v~~vD~~~~~~~~a~~~~~~~~~~~--v~~~~~d~-~~~ 152 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALIS--------EIV-------K-TDVYTIERIPELVEFAKRNLERAGVKN--VHVILGDG-SKG 152 (235)
T ss_dssp TCCEEEECCTTSHHHHHHH--------HHH-------C-SCEEEEESCHHHHHHHHHHHHHTTCCS--EEEEESCG-GGC
T ss_pred CCEEEEEeCCcCHHHHHHH--------HHh-------C-CEEEEEeCCHHHHHHHHHHHHHcCCCC--cEEEECCc-ccC
Confidence 4689999999999998875 222 1 3778888765443333222211 11 11122354 334
Q ss_pred CCCC-ceeEEEecCccccc
Q 018250 135 FPKS-TLHVVNSFNAMHWL 152 (359)
Q Consensus 135 ~p~~-s~d~~~S~~alHWL 152 (359)
+|++ .+|+|+++.++|++
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~ 171 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKI 171 (235)
T ss_dssp CGGGCCEEEEEECSBBSSC
T ss_pred CCCCCCccEEEECCcHHHH
Confidence 5544 49999999998874
No 176
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.80 E-value=6.6e-05 Score=67.09 Aligned_cols=102 Identities=11% Similarity=-0.011 Sum_probs=61.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC--CcccccccCcccccC-
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP--RKYYAAGVPGSFHGR- 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~--~~~~~~~vpgsfy~~- 133 (359)
...+|+|+|||+|..++.++ +++. |..+|+..|........+.+.... +-.++. +++...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la--------~~~~------~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~---~d~~~~~ 135 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVS--------DIVG------WEGKIFGIEFSPRVLRELVPIVEERRNIVPIL---GDATKPE 135 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHH--------HHHC------TTSEEEEEESCHHHHHHHHHHHSSCTTEEEEE---CCTTCGG
T ss_pred CCCEEEEEeccCCHHHHHHH--------HHhC------CCeEEEEEECCHHHHHHHHHHHhccCCCEEEE---ccCCCcc
Confidence 35699999999999999885 2321 234788888876544443333221 111222 344331
Q ss_pred --CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 134 --LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 134 --l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
...++++|++++.....| ....+|+.-.+-|+|||+++
T Consensus 136 ~~~~~~~~~D~v~~~~~~~~----------------------------------------~~~~~l~~~~~~LkpgG~l~ 175 (227)
T 1g8a_A 136 EYRALVPKVDVIFEDVAQPT----------------------------------------QAKILIDNAEVYLKRGGYGM 175 (227)
T ss_dssp GGTTTCCCEEEEEECCCSTT----------------------------------------HHHHHHHHHHHHEEEEEEEE
T ss_pred hhhcccCCceEEEECCCCHh----------------------------------------HHHHHHHHHHHhcCCCCEEE
Confidence 112468999997543110 11234666788999999999
Q ss_pred EEec
Q 018250 212 FSLI 215 (359)
Q Consensus 212 l~~~ 215 (359)
+.+.
T Consensus 176 ~~~~ 179 (227)
T 1g8a_A 176 IAVK 179 (227)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9943
No 177
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.78 E-value=9.8e-06 Score=72.54 Aligned_cols=103 Identities=13% Similarity=0.042 Sum_probs=64.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Cc-ccccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RK-YYAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~-~~~~~vpgsfy~ 132 (359)
+.+|+|+|||+|..|+.++ +.+ .+..+|+..|+........-+.+.. .. -++. |++.+
T Consensus 59 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~ 121 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMA--------RLL------QPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILN---GASQD 121 (221)
T ss_dssp CSEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHH
T ss_pred CCEEEEECCCCCHHHHHHH--------HhC------CCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEE---CCHHH
Confidence 5789999999999999885 221 1356899999977555444333221 11 1222 34332
Q ss_pred CC--CC----CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018250 133 RL--FP----KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP 206 (359)
Q Consensus 133 ~l--~p----~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 206 (359)
.+ ++ .+++|+|++....|+.. +...++... +-|+|
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~~~--------------------------------------~~~~~~~~~-~~Lkp 162 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDRYL--------------------------------------PDTLLLEKC-GLLRK 162 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGGHH--------------------------------------HHHHHHHHT-TCCCT
T ss_pred HHHHHHHhcCCCceEEEEEcCCcccch--------------------------------------HHHHHHHhc-cccCC
Confidence 11 22 37899999876655521 222355555 88999
Q ss_pred CceeEEEecc
Q 018250 207 GGLMVFSLIT 216 (359)
Q Consensus 207 GG~lvl~~~g 216 (359)
||++++....
T Consensus 163 gG~lv~~~~~ 172 (221)
T 3u81_A 163 GTVLLADNVI 172 (221)
T ss_dssp TCEEEESCCC
T ss_pred CeEEEEeCCC
Confidence 9999986654
No 178
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.77 E-value=2.9e-05 Score=69.63 Aligned_cols=85 Identities=15% Similarity=0.019 Sum_probs=49.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc-----c-cccccCcccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK-----Y-YAAGVPGSFH 131 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~-----~-~~~~vpgsfy 131 (359)
..+|+|+|||+|..|..+.. ..... ...+..+|+..|.........-+.+.... . -+.-+.++..
T Consensus 85 ~~~VLdiG~G~G~~~~~la~--------~~~~~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 155 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYR--------YIKAK-GVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGR 155 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHH--------HHHHS-CCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGG
T ss_pred CCEEEEECCCccHHHHHHHH--------hcccc-cCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcc
Confidence 46999999999999998852 22110 01123488888987644433322221000 0 0111223554
Q ss_pred cCCCCC-CceeEEEecCccccc
Q 018250 132 GRLFPK-STLHVVNSFNAMHWL 152 (359)
Q Consensus 132 ~~l~p~-~s~d~~~S~~alHWL 152 (359)
. .+|+ +++|+|++..++||+
T Consensus 156 ~-~~~~~~~fD~I~~~~~~~~~ 176 (227)
T 1r18_A 156 K-GYPPNAPYNAIHVGAAAPDT 176 (227)
T ss_dssp G-CCGGGCSEEEEEECSCBSSC
T ss_pred c-CCCcCCCccEEEECCchHHH
Confidence 4 4555 899999999999884
No 179
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.75 E-value=1.5e-05 Score=72.73 Aligned_cols=79 Identities=6% Similarity=-0.077 Sum_probs=47.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----C-cccccccCcccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----R-KYYAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~-~~~~~~vpgsfy 131 (359)
...+|+|+|||+|..++.++. +. |..+|+..|+........-+.+.. . --++.+ +..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~--------~~-------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~ 126 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGA--------TL-------NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKV---PQK 126 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHH--------HH-------HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC---CTT
T ss_pred CCCEEEEeCCChhHHHHHHHH--------hC-------CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEc---chh
Confidence 356999999999999988752 22 135888999877665544333211 1 123332 322
Q ss_pred c---CCCC---CCceeEEEecCcccccC
Q 018250 132 G---RLFP---KSTLHVVNSFNAMHWLS 153 (359)
Q Consensus 132 ~---~l~p---~~s~d~~~S~~alHWLs 153 (359)
+ ..++ ++++|+|+|+-.+|+..
T Consensus 127 ~~~~~~~~~~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 127 TLLMDALKEESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp CSSTTTSTTCCSCCBSEEEECCCCC---
T ss_pred hhhhhhhhcccCCcccEEEECCCCccCc
Confidence 2 1244 36899999987777643
No 180
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.74 E-value=3.5e-05 Score=74.33 Aligned_cols=76 Identities=12% Similarity=0.142 Sum_probs=44.7
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..++.++ +. +..+|+..|+.. +....-+.+.... --+.-+.+++.+..
T Consensus 50 ~~~~VLDiGcGtG~ls~~la--------~~--------g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~ 112 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAA--------QA--------GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS 112 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HT--------TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred CcCEEEEcCCCccHHHHHHH--------hC--------CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC
Confidence 34699999999999988774 21 234899999863 4332222211000 00122234554433
Q ss_pred CCCCceeEEEecCccc
Q 018250 135 FPKSTLHVVNSFNAMH 150 (359)
Q Consensus 135 ~p~~s~d~~~S~~alH 150 (359)
+| +++|+|+|...++
T Consensus 113 ~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 113 LP-EQVDIIISEPMGY 127 (348)
T ss_dssp CS-SCEEEEEECCCBT
T ss_pred CC-CceeEEEEeCchh
Confidence 44 6899999987654
No 181
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.70 E-value=2e-05 Score=71.16 Aligned_cols=103 Identities=9% Similarity=0.019 Sum_probs=64.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|..|+.++ +.+ .+..+|+..|+........-+.+.. ..--+.-+.|+..+-+
T Consensus 57 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l 122 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYIL--------NGL------ADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM 122 (221)
T ss_dssp CCEEEEESTTHHHHHHHHH--------HHS------CTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG
T ss_pred CCCEEEEcCCchHHHHHHH--------HhC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH
Confidence 3589999999999999885 332 2356899999987655444333221 1001122234444333
Q ss_pred --CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 135 --FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 135 --~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
++++++|+||+.... .++..||+.-.+-|+|||++++
T Consensus 123 ~~~~~~~fD~V~~d~~~-----------------------------------------~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 123 SRLANDSYQLVFGQVSP-----------------------------------------MDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp GGSCTTCEEEEEECCCT-----------------------------------------TTHHHHHHHHHHHEEEEEEEEE
T ss_pred HHhcCCCcCeEEEcCcH-----------------------------------------HHHHHHHHHHHHHcCCCcEEEE
Confidence 347899999975311 0223466677789999999998
Q ss_pred Eec
Q 018250 213 SLI 215 (359)
Q Consensus 213 ~~~ 215 (359)
...
T Consensus 162 dn~ 164 (221)
T 3dr5_A 162 ADA 164 (221)
T ss_dssp TTT
T ss_pred eCC
Confidence 543
No 182
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.68 E-value=0.00012 Score=72.95 Aligned_cols=101 Identities=12% Similarity=0.023 Sum_probs=59.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHH-------HHhC---C--CCcc-cc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTL-------FRTL---P--PRKY-YA 123 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~l-------f~~l---~--~~~~-~~ 123 (359)
...+|+|+|||+|..++.++. .+ +..+|+.-|+........ -+.+ . ...+ ++
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~--------~~-------g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAAL--------EC-------GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHH--------HH-------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHH--------HC-------CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 457999999999999998852 22 123677777766443322 1111 1 0011 22
Q ss_pred cccCcccccC-CC--CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018250 124 AGVPGSFHGR-LF--PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNAR 200 (359)
Q Consensus 124 ~~vpgsfy~~-l~--p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~R 200 (359)
.+ +++... .| +.+++|+|+++.++++ | |+...|+..
T Consensus 307 ~g--D~~~~~~~~~~~~~~FDvIvvn~~l~~----~-----------------------------------d~~~~L~el 345 (433)
T 1u2z_A 307 LK--KSFVDNNRVAELIPQCDVILVNNFLFD----E-----------------------------------DLNKKVEKI 345 (433)
T ss_dssp ES--SCSTTCHHHHHHGGGCSEEEECCTTCC----H-----------------------------------HHHHHHHHH
T ss_pred Ec--CccccccccccccCCCCEEEEeCcccc----c-----------------------------------cHHHHHHHH
Confidence 11 122111 01 2468999999876632 1 334466677
Q ss_pred HHhhccCceeEEE
Q 018250 201 AEELVPGGLMVFS 213 (359)
Q Consensus 201 a~EL~pGG~lvl~ 213 (359)
.+.|+|||+|++.
T Consensus 346 ~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 346 LQTAKVGCKIISL 358 (433)
T ss_dssp HTTCCTTCEEEES
T ss_pred HHhCCCCeEEEEe
Confidence 8899999999987
No 183
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.68 E-value=7e-05 Score=69.32 Aligned_cols=100 Identities=15% Similarity=0.033 Sum_probs=63.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRLF 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l~ 135 (359)
..+|+|+|||+|..++.++ +.. .|..+++..|+........-+.+.... --+.-+.+++.+. +
T Consensus 113 ~~~VLDiG~G~G~~~~~la--------~~~------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~ 177 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLA--------RAV------GSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-F 177 (277)
T ss_dssp TCEEEEECCTTSHHHHHHH--------HHT------TTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-C
T ss_pred CCEEEEECCcCCHHHHHHH--------HHh------CCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-c
Confidence 4699999999999998874 221 134689999987655444333321100 0122233466544 7
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|++++|+++++ .|.. ..+|+.-.+-|+|||++++...
T Consensus 178 ~~~~~D~V~~~--------~~~~-----------------------------------~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 178 DEKDVDALFLD--------VPDP-----------------------------------WNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp SCCSEEEEEEC--------CSCG-----------------------------------GGTHHHHHHHEEEEEEEEEEES
T ss_pred cCCccCEEEEC--------CcCH-----------------------------------HHHHHHHHHHcCCCCEEEEEeC
Confidence 88899999983 1211 0245566788999999999874
No 184
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.67 E-value=6.3e-05 Score=69.73 Aligned_cols=101 Identities=12% Similarity=0.130 Sum_probs=64.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC-c-ccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR-K-YYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~-~-~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..++.++. .. .|..+++..|+........-+.+... . --+.-+.+++.+ .
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~--------~~------~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~ 174 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILY--------AL------NGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-F 174 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHH--------HH------TTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-C
T ss_pred CcCEEEEecCCCCHHHHHHHH--------Hc------CCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-c
Confidence 357999999999999988852 21 13468999998765544333322111 0 001122346644 6
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
+|++++|++++ | +|.. ..+|+.-.+-|+|||++++..
T Consensus 175 ~~~~~fD~Vi~----~----~~~~-----------------------------------~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 175 ISDQMYDAVIA----D----IPDP-----------------------------------WNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp CCSCCEEEEEE----C----CSCG-----------------------------------GGSHHHHHHTEEEEEEEEEEE
T ss_pred CcCCCccEEEE----c----CcCH-----------------------------------HHHHHHHHHHcCCCCEEEEEe
Confidence 78889999998 2 2211 025666778899999999987
Q ss_pred c
Q 018250 215 I 215 (359)
Q Consensus 215 ~ 215 (359)
.
T Consensus 212 ~ 212 (275)
T 1yb2_A 212 P 212 (275)
T ss_dssp S
T ss_pred C
Confidence 4
No 185
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.66 E-value=1.4e-05 Score=72.35 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=63.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Cc-ccccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RK-YYAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~-~~~~~vpgsfy~ 132 (359)
..+|+|+|||+|..|+.++ +. .|..+|+..|+........-+.+.. .. -|+. +++.+
T Consensus 72 ~~~vLDiG~G~G~~~~~la--------~~-------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~ 133 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFA--------SI-------SDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIE---GNALE 133 (232)
T ss_dssp CCEEEEECCSSSHHHHHHH--------TT-------CTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE---SCGGG
T ss_pred CCEEEEEeCchhHHHHHHH--------Hh-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---CCHHH
Confidence 5799999999999999884 21 2456899999876554444333211 11 1333 34433
Q ss_pred CCCC---CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCce
Q 018250 133 RLFP---KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGL 209 (359)
Q Consensus 133 ~l~p---~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 209 (359)
. +| ++++|+|++... .. ++..||+.-.+-|+|||+
T Consensus 134 ~-~~~~~~~~fD~V~~~~~---~~--------------------------------------~~~~~l~~~~~~LkpgG~ 171 (232)
T 3ntv_A 134 Q-FENVNDKVYDMIFIDAA---KA--------------------------------------QSKKFFEIYTPLLKHQGL 171 (232)
T ss_dssp C-HHHHTTSCEEEEEEETT---SS--------------------------------------SHHHHHHHHGGGEEEEEE
T ss_pred H-HHhhccCCccEEEEcCc---HH--------------------------------------HHHHHHHHHHHhcCCCeE
Confidence 2 23 689999996521 10 233477777899999999
Q ss_pred eEEEec
Q 018250 210 MVFSLI 215 (359)
Q Consensus 210 lvl~~~ 215 (359)
+++...
T Consensus 172 lv~d~~ 177 (232)
T 3ntv_A 172 VITDNV 177 (232)
T ss_dssp EEEECT
T ss_pred EEEeeC
Confidence 988443
No 186
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.66 E-value=1.6e-05 Score=67.23 Aligned_cols=107 Identities=13% Similarity=0.021 Sum_probs=61.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCC--C
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRL--F 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l--~ 135 (359)
..+|+|+|||+|..++.++ +. .+ .++..|+.......+-+.......-+.-+.+++.+.+ +
T Consensus 42 ~~~vLD~GcG~G~~~~~l~--------~~-------~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAA--------SE-------GW--EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEA 104 (171)
T ss_dssp CCEEEEETCSSCHHHHHHH--------HT-------TC--EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHH--------HC-------CC--eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhh
Confidence 4689999999999998874 22 12 3888888765544433322210000111123443311 1
Q ss_pred C--CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEE
Q 018250 136 P--KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFS 213 (359)
Q Consensus 136 p--~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~ 213 (359)
+ ++++|+++++..+| ...+. + +..+.+ .+-|+|||+++++
T Consensus 105 ~~~~~~~D~i~~~~~~~--~~~~~-----------------------~-----------~~~~~~--~~~L~~gG~~~~~ 146 (171)
T 1ws6_A 105 KAQGERFTVAFMAPPYA--MDLAA-----------------------L-----------FGELLA--SGLVEAGGLYVLQ 146 (171)
T ss_dssp HHTTCCEEEEEECCCTT--SCTTH-----------------------H-----------HHHHHH--HTCEEEEEEEEEE
T ss_pred hccCCceEEEEECCCCc--hhHHH-----------------------H-----------HHHHHh--hcccCCCcEEEEE
Confidence 1 34899999987766 21111 0 111221 5789999999999
Q ss_pred eccCCC
Q 018250 214 LITGPS 219 (359)
Q Consensus 214 ~~g~~~ 219 (359)
+.....
T Consensus 147 ~~~~~~ 152 (171)
T 1ws6_A 147 HPKDLY 152 (171)
T ss_dssp EETTSC
T ss_pred eCCccC
Confidence 876554
No 187
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.66 E-value=9.8e-05 Score=69.18 Aligned_cols=106 Identities=10% Similarity=0.019 Sum_probs=62.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC--Ccc--ccccc--Cccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP--RKY--YAAGV--PGSF 130 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~--~~~--~~~~v--pgsf 130 (359)
...+|+|+|||+|..|..+++. .+|+..|+.. +-.. .+..+. +.+ =+.-+ -+++
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~------------------~~V~gVD~s~-m~~~-a~~~~~~~~~~~~~v~~~~~~~D~ 141 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ------------------PNVREVKAYT-LGTS-GHEKPRLVETFGWNLITFKSKVDV 141 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS------------------TTEEEEEEEC-CCCT-TSCCCCCCCCTTGGGEEEECSCCG
T ss_pred CCCEEEEeccCCCHHHHHHHHc------------------CCEEEEECch-hhhh-hhhchhhhhhcCCCeEEEeccCcH
Confidence 3579999999999999877421 2677777765 3110 000010 000 01112 3455
Q ss_pred ccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCc--
Q 018250 131 HGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGG-- 208 (359)
Q Consensus 131 y~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG-- 208 (359)
.. +|++++|+|+|..+ ++... |. .+ +. +.+ .+|+...+-|+|||
T Consensus 142 ~~--l~~~~fD~Vvsd~~-~~~~~-~~--~d--------------------------~~-~~l-~~L~~~~r~LkpGG~~ 187 (276)
T 2wa2_A 142 TK--MEPFQADTVLCDIG-ESNPT-AA--VE--------------------------AS-RTL-TVLNVISRWLEYNQGC 187 (276)
T ss_dssp GG--CCCCCCSEEEECCC-CCCSC-HH--HH--------------------------HH-HHH-HHHHHHHHHHHHSTTC
T ss_pred hh--CCCCCcCEEEECCC-cCCCc-hh--hh--------------------------HH-HHH-HHHHHHHHHhccCCCc
Confidence 44 57899999999887 55221 10 00 00 011 16677778899999
Q ss_pred eeEEEecc
Q 018250 209 LMVFSLIT 216 (359)
Q Consensus 209 ~lvl~~~g 216 (359)
.|++..+.
T Consensus 188 ~~v~~~~~ 195 (276)
T 2wa2_A 188 GFCVKVLN 195 (276)
T ss_dssp EEEEEESC
T ss_pred EEEEEeCC
Confidence 99998776
No 188
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.65 E-value=9.7e-05 Score=67.22 Aligned_cols=113 Identities=18% Similarity=0.124 Sum_probs=64.7
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC-----------C-CCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL-----------P-PRKYYAA 124 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l-----------~-~~~~~~~ 124 (359)
...+|+|+|||+|..++.++ +. .|...++..|........+-+.+ . .+--++.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la--------~~-------~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~ 113 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLS--------PA-------FPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLR 113 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHH--------HH-------STTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHH--------Hh-------CCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEe
Confidence 35789999999999999885 22 24567888888765443332211 0 0111222
Q ss_pred ccCcccccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018250 125 GVPGSFHGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEEL 204 (359)
Q Consensus 125 ~vpgsfy~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 204 (359)
+-.-.+....++++++|.++....--|.... .. +.++. -..||+.-++-|
T Consensus 114 ~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~----~~-------~~r~~-------------------~~~~l~~~~~~L 163 (246)
T 2vdv_E 114 GNAMKFLPNFFEKGQLSKMFFCFPDPHFKQR----KH-------KARII-------------------TNTLLSEYAYVL 163 (246)
T ss_dssp CCTTSCGGGTSCTTCEEEEEEESCCCC-----------------CSSCC-------------------CHHHHHHHHHHE
T ss_pred ccHHHHHHHhccccccCEEEEECCCcccccc----hh-------HHhhc-------------------cHHHHHHHHHHc
Confidence 2222223345788999999865433331110 00 00000 024777778999
Q ss_pred ccCceeEEEe
Q 018250 205 VPGGLMVFSL 214 (359)
Q Consensus 205 ~pGG~lvl~~ 214 (359)
+|||+|++.+
T Consensus 164 kpgG~l~~~t 173 (246)
T 2vdv_E 164 KEGGVVYTIT 173 (246)
T ss_dssp EEEEEEEEEE
T ss_pred CCCCEEEEEe
Confidence 9999999965
No 189
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.62 E-value=5.7e-05 Score=70.53 Aligned_cols=106 Identities=13% Similarity=0.115 Sum_probs=63.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCC-CCchHHHHHhC-----CCC--------cc-c
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHT-ENDFNTLFRTL-----PPR--------KY-Y 122 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp-~NDFn~lf~~l-----~~~--------~~-~ 122 (359)
..+|+|+|||+|..++.++ +. ...+|+..|++ ...-..+-++. ... .+ +
T Consensus 80 ~~~vLDlG~G~G~~~~~~a--------~~--------~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAF--------LA--------GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp TCEEEETTCTTSHHHHHHH--------HT--------TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred CCeEEEecccccHHHHHHH--------Hc--------CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 4689999999999988763 21 11389999994 33333222222 110 11 1
Q ss_pred ccccCcccccCCC---CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHH
Q 018250 123 AAGVPGSFHGRLF---PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNA 199 (359)
Q Consensus 123 ~~~vpgsfy~~l~---p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~ 199 (359)
....-|+....+. +++++|+|+++.++++.. +...+|+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~--------------------------------------~~~~ll~~ 185 (281)
T 3bzb_A 144 VPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQ--------------------------------------AHDALLRS 185 (281)
T ss_dssp EECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGG--------------------------------------GHHHHHHH
T ss_pred EEecCCCccHHHHhhccCCCCCEEEEeCcccChH--------------------------------------HHHHHHHH
Confidence 1111112112222 578999999988888832 23346677
Q ss_pred HHHhhc---c--CceeEEEeccC
Q 018250 200 RAEELV---P--GGLMVFSLITG 217 (359)
Q Consensus 200 Ra~EL~---p--GG~lvl~~~g~ 217 (359)
-.+-|+ | ||++++.+..+
T Consensus 186 l~~~Lk~~~p~~gG~l~v~~~~~ 208 (281)
T 3bzb_A 186 VKMLLALPANDPTAVALVTFTHH 208 (281)
T ss_dssp HHHHBCCTTTCTTCEEEEEECC-
T ss_pred HHHHhcccCCCCCCEEEEEEEee
Confidence 778899 9 99998877544
No 190
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.62 E-value=0.00028 Score=66.65 Aligned_cols=108 Identities=9% Similarity=0.042 Sum_probs=62.6
Q ss_pred cceEEEeecCCCCccc----HHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNT----FISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt----~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~ 132 (359)
...+|+|+|||+|.+. ..+ .+.. .+..+|+..|+... ++ +--|. +-|++.+
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~--------a~~~------~~~~~V~gvDis~~--------v~-~v~~~--i~gD~~~ 117 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVL--------RQWL------PTGTLLVDSDLNDF--------VS-DADST--LIGDCAT 117 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHH--------HHHS------CTTCEEEEEESSCC--------BC-SSSEE--EESCGGG
T ss_pred CCCEEEEeCCCCCCCCCcHHHHH--------HHHc------CCCCEEEEEECCCC--------CC-CCEEE--EECcccc
Confidence 3578999999774443 222 2332 12468999999764 22 11230 2346655
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
..++ +++|+|+|+.+.+|..... .+.. . ....+...|+.-.+-|+|||+|++
T Consensus 118 ~~~~-~~fD~Vvsn~~~~~~g~~~---~d~~-----~-------------------~~~l~~~~l~~a~r~LkpGG~~v~ 169 (290)
T 2xyq_A 118 VHTA-NKWDLIISDMYDPRTKHVT---KEND-----S-------------------KEGFFTYLCGFIKQKLALGGSIAV 169 (290)
T ss_dssp CCCS-SCEEEEEECCCCCC---CC---SCCC-----C-------------------CCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcc-CcccEEEEcCCcccccccc---cccc-----c-------------------hHHHHHHHHHHHHHhcCCCcEEEE
Confidence 4444 7899999987655521110 0000 0 011345677778899999999999
Q ss_pred EeccC
Q 018250 213 SLITG 217 (359)
Q Consensus 213 ~~~g~ 217 (359)
..+..
T Consensus 170 ~~~~~ 174 (290)
T 2xyq_A 170 KITEH 174 (290)
T ss_dssp EECSS
T ss_pred EEecc
Confidence 76543
No 191
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.62 E-value=4.5e-05 Score=72.63 Aligned_cols=110 Identities=13% Similarity=0.025 Sum_probs=67.8
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC--------CCc-ccccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP--------PRK-YYAAGVP 127 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~--------~~~-~~~~~vp 127 (359)
.+.+|+|+|||+|..+..++ +. .+..+++..|+-.......-+.++ ..+ -++.
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~--- 138 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVL--------KH-------PTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI--- 138 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHT--------TS-------TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE---
T ss_pred CCCeEEEEcCCcCHHHHHHH--------hc-------CCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEE---
Confidence 45799999999999988774 11 234578888887644433322221 111 1222
Q ss_pred cccccCC-CCCCceeEEEecCcccc-cCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018250 128 GSFHGRL-FPKSTLHVVNSFNAMHW-LSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELV 205 (359)
Q Consensus 128 gsfy~~l-~p~~s~d~~~S~~alHW-Ls~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~ 205 (359)
++..+-+ .+++++|+|++....|| ++..+..+. ...|++.-++-|+
T Consensus 139 ~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~--------------------------------~~~~l~~~~~~Lk 186 (314)
T 1uir_A 139 DDARAYLERTEERYDVVIIDLTDPVGEDNPARLLY--------------------------------TVEFYRLVKAHLN 186 (314)
T ss_dssp SCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGS--------------------------------SHHHHHHHHHTEE
T ss_pred chHHHHHHhcCCCccEEEECCCCcccccCcchhcc--------------------------------HHHHHHHHHHhcC
Confidence 2332212 24789999999988887 221111110 1347778889999
Q ss_pred cCceeEEEecc
Q 018250 206 PGGLMVFSLIT 216 (359)
Q Consensus 206 pGG~lvl~~~g 216 (359)
|||+|++....
T Consensus 187 pgG~lv~~~~~ 197 (314)
T 1uir_A 187 PGGVMGMQTGM 197 (314)
T ss_dssp EEEEEEEEEEE
T ss_pred CCcEEEEEccC
Confidence 99999998644
No 192
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.61 E-value=5.8e-05 Score=67.85 Aligned_cols=102 Identities=13% Similarity=0.165 Sum_probs=63.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCC-
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRL- 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l- 134 (359)
..+|+|+|||+|..++.++ +.+ |..+|+..|.........-+.+.... --+..+.+++.+.+
T Consensus 55 ~~~vLdiG~G~G~~~~~la--------~~~-------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 119 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMA--------QAL-------PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE 119 (233)
T ss_dssp CSEEEEECCTTSHHHHHHH--------HHC-------TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH
T ss_pred CCEEEEecCCCcHHHHHHH--------HHC-------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH
Confidence 4699999999999998885 232 34689999987654443333221100 00111223443322
Q ss_pred C--CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 135 F--PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 135 ~--p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
. .++++|+|++....+ ++..+|+.-.+-|+|||++++
T Consensus 120 ~~~~~~~fD~I~~~~~~~-----------------------------------------~~~~~l~~~~~~L~pgG~lv~ 158 (233)
T 2gpy_A 120 KLELYPLFDVLFIDAAKG-----------------------------------------QYRRFFDMYSPMVRPGGLILS 158 (233)
T ss_dssp HHTTSCCEEEEEEEGGGS-----------------------------------------CHHHHHHHHGGGEEEEEEEEE
T ss_pred hcccCCCccEEEECCCHH-----------------------------------------HHHHHHHHHHHHcCCCeEEEE
Confidence 1 157899999854432 233577777899999999999
Q ss_pred Eec
Q 018250 213 SLI 215 (359)
Q Consensus 213 ~~~ 215 (359)
...
T Consensus 159 ~~~ 161 (233)
T 2gpy_A 159 DNV 161 (233)
T ss_dssp ETT
T ss_pred EcC
Confidence 743
No 193
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.60 E-value=0.00016 Score=67.31 Aligned_cols=106 Identities=17% Similarity=0.114 Sum_probs=61.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC--Ccc--ccccc--Cccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP--RKY--YAAGV--PGSF 130 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~--~~~--~~~~v--pgsf 130 (359)
...+|+|+|||+|..|..+++. .+|+..|+.. +-.. .+..+. +.+ =+.-+ -+++
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~------------------~~V~gvD~s~-m~~~-a~~~~~~~~~~~~~v~~~~~~~D~ 133 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR------------------PHVMDVRAYT-LGVG-GHEVPRITESYGWNIVKFKSRVDI 133 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS------------------TTEEEEEEEC-CCCS-SCCCCCCCCBTTGGGEEEECSCCT
T ss_pred CCCEEEEeCcCCCHHHHHHHHc------------------CcEEEEECch-hhhh-hhhhhhhhhccCCCeEEEecccCH
Confidence 3579999999999999877421 2677777755 2100 000010 000 01112 3455
Q ss_pred ccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCc--
Q 018250 131 HGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGG-- 208 (359)
Q Consensus 131 y~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG-- 208 (359)
.. +|++++|+|+|..+ +.... | ..+ +. +.+ ..|+...+-|+|||
T Consensus 134 ~~--l~~~~fD~V~sd~~-~~~~~-~--~~d--------------------------~~-~~l-~~L~~~~r~LkpGG~~ 179 (265)
T 2oxt_A 134 HT--LPVERTDVIMCDVG-ESSPK-W--SVE--------------------------SE-RTI-KILELLEKWKVKNPSA 179 (265)
T ss_dssp TT--SCCCCCSEEEECCC-CCCSC-H--HHH--------------------------HH-HHH-HHHHHHHHHHHHCTTC
T ss_pred hH--CCCCCCcEEEEeCc-ccCCc-c--chh--------------------------HH-HHH-HHHHHHHHHhccCCCe
Confidence 44 57889999999877 55211 1 000 00 011 16777778999999
Q ss_pred eeEEEecc
Q 018250 209 LMVFSLIT 216 (359)
Q Consensus 209 ~lvl~~~g 216 (359)
.|++..+.
T Consensus 180 ~fv~kv~~ 187 (265)
T 2oxt_A 180 DFVVKVLC 187 (265)
T ss_dssp EEEEEESC
T ss_pred EEEEEeCC
Confidence 99998776
No 194
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.59 E-value=0.00012 Score=69.71 Aligned_cols=124 Identities=17% Similarity=0.078 Sum_probs=71.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|..|..++ +..+ +..+|+..|+.......+-+.+.. .. +.-+.+++..-.
T Consensus 119 g~~VLDlg~G~G~~t~~la--------~~~~------~~~~v~avD~s~~~l~~a~~~~~~~g~~~--v~~~~~D~~~~~ 182 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLA--------QLMR------NDGVIYAFDVDENRLRETRLNLSRLGVLN--VILFHSSSLHIG 182 (315)
T ss_dssp TCEEEECCSSCSHHHHHHH--------HHTT------TCSEEEEECSCHHHHHHHHHHHHHHTCCS--EEEESSCGGGGG
T ss_pred CCEEEEeCCCCCHHHHHHH--------HHhC------CCCEEEEEcCCHHHHHHHHHHHHHhCCCe--EEEEECChhhcc
Confidence 4689999999999999885 3321 235899999987766655544321 11 111223443322
Q ss_pred CCCCceeEEEecC---cccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 135 FPKSTLHVVNSFN---AMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 135 ~p~~s~d~~~S~~---alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
.+++++|+|++.. .+.-+.+.|.... .. .++. .....+....+|+.-++-|+|||+|+
T Consensus 183 ~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~--------------~~-~~~~----~~~~~~~q~~~L~~~~~~LkpGG~lv 243 (315)
T 1ixk_A 183 ELNVEFDKILLDAPCTGSGTIHKNPERKW--------------NR-TMDD----IKFCQGLQMRLLEKGLEVLKPGGILV 243 (315)
T ss_dssp GGCCCEEEEEEECCTTSTTTCC----------------------C-CHHH----HHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cccccCCEEEEeCCCCCcccccCChhHhh--------------cC-CHHH----HHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 3467899999842 1221222222110 00 1111 12233345678888899999999999
Q ss_pred EEecc
Q 018250 212 FSLIT 216 (359)
Q Consensus 212 l~~~g 216 (359)
+++..
T Consensus 244 ~stcs 248 (315)
T 1ixk_A 244 YSTCS 248 (315)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 97753
No 195
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.59 E-value=5.9e-05 Score=71.71 Aligned_cols=101 Identities=13% Similarity=0.062 Sum_probs=58.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCC----CCCchHHHHHhCCCCcc---cccccCc-c
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDH----TENDFNTLFRTLPPRKY---YAAGVPG-S 129 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDL----p~NDFn~lf~~l~~~~~---~~~~vpg-s 129 (359)
..+|+|+|||+|..|..+++. -+|+..|+ ..++. ..++.+.. -+.-+-| +
T Consensus 83 g~~VLDlGcG~G~~s~~la~~------------------~~V~gvD~~~~~~~~~~----~~~~~~~~~~~~v~~~~~~D 140 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL------------------KNVREVKGLTKGGPGHE----EPIPMSTYGWNLVRLQSGVD 140 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS------------------TTEEEEEEECCCSTTSC----CCCCCCSTTGGGEEEECSCC
T ss_pred CCEEEEEcCCCCHHHHHHHhc------------------CCEEEEeccccCchhHH----HHHHhhhcCCCCeEEEeccc
Confidence 479999999999999887521 14566665 12111 01110100 0111123 4
Q ss_pred cccCCCCCCceeEEEecCccc---ccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018250 130 FHGRLFPKSTLHVVNSFNAMH---WLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP 206 (359)
Q Consensus 130 fy~~l~p~~s~d~~~S~~alH---WLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 206 (359)
+.. +|++++|+|+|..+++ |.. + +. +.+ ..|+...+-|+|
T Consensus 141 ~~~--l~~~~fD~V~sd~~~~~g~~~~-------d--------------------------~~-~~l-~~L~~~~~~Lkp 183 (305)
T 2p41_A 141 VFF--IPPERCDTLLCDIGESSPNPTV-------E--------------------------AG-RTL-RVLNLVENWLSN 183 (305)
T ss_dssp TTT--SCCCCCSEEEECCCCCCSSHHH-------H--------------------------HH-HHH-HHHHHHHHHCCT
T ss_pred ccc--CCcCCCCEEEECCccccCcchh-------h--------------------------HH-HHH-HHHHHHHHHhCC
Confidence 432 3678999999987764 311 1 00 011 356666789999
Q ss_pred CceeEEEeccC
Q 018250 207 GGLMVFSLITG 217 (359)
Q Consensus 207 GG~lvl~~~g~ 217 (359)
||.|++.++..
T Consensus 184 GG~~v~kv~~~ 194 (305)
T 2p41_A 184 NTQFCVKVLNP 194 (305)
T ss_dssp TCEEEEEESCC
T ss_pred CCEEEEEeCCC
Confidence 99999977643
No 196
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.58 E-value=3.8e-05 Score=70.28 Aligned_cols=100 Identities=14% Similarity=0.068 Sum_probs=62.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Cc-ccccccCcccc-
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RK-YYAAGVPGSFH- 131 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~-~~~~~vpgsfy- 131 (359)
..+|+|+|||+|..|+.++ +.+ ++..+|+..|+........-+.+.. .. -+.. |++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~ 126 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMA--------REL------PADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE---GPALQ 126 (248)
T ss_dssp CSEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHH
T ss_pred CCEEEEecCCchHHHHHHH--------HhC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHH
Confidence 5799999999999999884 222 1257899999976555444333211 11 1233 2332
Q ss_pred --cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCce
Q 018250 132 --GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGL 209 (359)
Q Consensus 132 --~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 209 (359)
..+...+++|+|++..... +...+|+.-.+-|+|||+
T Consensus 127 ~l~~~~~~~~fD~V~~d~~~~-----------------------------------------~~~~~l~~~~~~LkpGG~ 165 (248)
T 3tfw_A 127 SLESLGECPAFDLIFIDADKP-----------------------------------------NNPHYLRWALRYSRPGTL 165 (248)
T ss_dssp HHHTCCSCCCCSEEEECSCGG-----------------------------------------GHHHHHHHHHHTCCTTCE
T ss_pred HHHhcCCCCCeEEEEECCchH-----------------------------------------HHHHHHHHHHHhcCCCeE
Confidence 2232345899999854211 223366677789999999
Q ss_pred eEEEec
Q 018250 210 MVFSLI 215 (359)
Q Consensus 210 lvl~~~ 215 (359)
+++...
T Consensus 166 lv~~~~ 171 (248)
T 3tfw_A 166 IIGDNV 171 (248)
T ss_dssp EEEECC
T ss_pred EEEeCC
Confidence 998765
No 197
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.56 E-value=0.00012 Score=66.59 Aligned_cols=40 Identities=20% Similarity=0.071 Sum_probs=28.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTEND 108 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~ND 108 (359)
+.+|+|+|||+|..|+.+++.+ +. . .|..+|+..|+....
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~----~~-~------~~~~~V~gvD~s~~~ 121 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLT----KI-M------GIDCQVIGIDRDLSR 121 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHH----HH-T------TCCCEEEEEESCCTT
T ss_pred CCEEEEEeCCCCHHHHHHHHhh----hh-c------CCCCEEEEEeCChHH
Confidence 3599999999999999875321 10 1 134689999987644
No 198
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.54 E-value=0.00017 Score=71.57 Aligned_cols=125 Identities=19% Similarity=0.185 Sum_probs=75.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCC--C
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRL--F 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l--~ 135 (359)
..+|+|+|||+|..|..++ +.. +..+++..|........+-+.+.....-+..+.+++.... +
T Consensus 247 g~~VLDlgaG~G~~t~~la--------~~~-------~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~ 311 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHIL--------EVA-------PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWC 311 (429)
T ss_dssp TCEEEEESCTTCHHHHHHH--------HHC-------TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHH
T ss_pred cCeEEEECCCchHHHHHHH--------HHc-------CCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhc
Confidence 4689999999999999885 222 2358999999888777665554210000111223443322 5
Q ss_pred CCCceeEEEe---cCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 136 PKSTLHVVNS---FNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 136 p~~s~d~~~S---~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
+++++|+|++ ++....+.+.|..... .++.++ ....+....+|+.-.+-|+|||+|++
T Consensus 312 ~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~--------------~~~~~~-----~~l~~~q~~~L~~a~~~LkpGG~lvy 372 (429)
T 1sqg_A 312 GEQQFDRILLDAPCSATGVIRRHPDIKWL--------------RRDRDI-----PELAQLQSEILDAIWPHLKTGGTLVY 372 (429)
T ss_dssp TTCCEEEEEEECCCCCGGGTTTCTTHHHH--------------CCTTHH-----HHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ccCCCCEEEEeCCCCcccccCCCcchhhc--------------CCHHHH-----HHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 6789999997 3344444444432110 011111 11223345788888899999999999
Q ss_pred Eecc
Q 018250 213 SLIT 216 (359)
Q Consensus 213 ~~~g 216 (359)
++..
T Consensus 373 stcs 376 (429)
T 1sqg_A 373 ATCS 376 (429)
T ss_dssp EESC
T ss_pred EECC
Confidence 8753
No 199
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.50 E-value=8.7e-05 Score=71.45 Aligned_cols=115 Identities=10% Similarity=0.007 Sum_probs=73.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc-cccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY-YAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~-~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|..++.++. .. .|...++..|+........-+++..... .+.-+-+++.+...
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~--------~~------~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAAS--------TL------GPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR 268 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHH--------HH------CTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG
T ss_pred CCCEEEeCCCCcCHHHHHHHH--------hh------CCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc
Confidence 356899999999999988852 22 1346899999877665544443321100 12223346666566
Q ss_pred CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 136 PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
|.+++|+++++-..+|... .. .+.......+++.-.+-|+|||++++.+.
T Consensus 269 ~~~~~D~Ii~npPyg~r~~----------------------~~--------~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 269 FFPEVDRILANPPHGLRLG----------------------RK--------EGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp TCCCCSEEEECCCSCC--------------------------C--------HHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred ccCCCCEEEECCCCcCccC----------------------Cc--------ccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 7778999999765554110 00 11223446788888899999999999874
No 200
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.50 E-value=9.9e-05 Score=69.64 Aligned_cols=108 Identities=8% Similarity=-0.095 Sum_probs=61.7
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC-------CCc-ccccccCc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP-------PRK-YYAAGVPG 128 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~-------~~~-~~~~~vpg 128 (359)
.+.+|+|+|||+|..+..++ +. .+..+++..|+-.......-+.++ ..+ -++. +
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~---~ 151 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVL--------KH-------DSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---A 151 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHT--------TS-------TTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---S
T ss_pred CCCEEEEEcCCcCHHHHHHH--------hc-------CCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---C
Confidence 35799999999999998874 11 134688888887644433333321 111 1222 2
Q ss_pred ccccCC-CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 129 SFHGRL-FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 129 sfy~~l-~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
+..+-+ .+++++|+|++...-+|... +..+ ....|++.-++-|+||
T Consensus 152 D~~~~l~~~~~~fD~Ii~d~~~~~~~~-~~~l--------------------------------~~~~~l~~~~~~Lkpg 198 (296)
T 1inl_A 152 NGAEYVRKFKNEFDVIIIDSTDPTAGQ-GGHL--------------------------------FTEEFYQACYDALKED 198 (296)
T ss_dssp CHHHHGGGCSSCEEEEEEEC-----------C--------------------------------CSHHHHHHHHHHEEEE
T ss_pred cHHHHHhhCCCCceEEEEcCCCcccCc-hhhh--------------------------------hHHHHHHHHHHhcCCC
Confidence 322211 24678999999766565421 1110 1134777778999999
Q ss_pred ceeEEEec
Q 018250 208 GLMVFSLI 215 (359)
Q Consensus 208 G~lvl~~~ 215 (359)
|+|++...
T Consensus 199 G~lv~~~~ 206 (296)
T 1inl_A 199 GVFSAETE 206 (296)
T ss_dssp EEEEEECC
T ss_pred cEEEEEcc
Confidence 99999853
No 201
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.50 E-value=0.00016 Score=65.40 Aligned_cols=100 Identities=14% Similarity=0.035 Sum_probs=64.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC----CCCcccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL----PPRKYYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l----~~~~~~~~~vpgsfy~ 132 (359)
...+|+|+|||+|..++.++ +.. .|..+++..|+.......+-+.+ .... +.-+.+++.+
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~--------~~~------~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~--v~~~~~d~~~ 159 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLA--------RAV------GEKGLVESYEARPHHLAQAERNVRAFWQVEN--VRFHLGKLEE 159 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH------CTTSEEEEEESCHHHHHHHHHHHHHHCCCCC--EEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHH--------HHh------CCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC--EEEEECchhh
Confidence 35699999999999998875 221 13458999998765544443332 1111 1122346655
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
..+|++++|++++. + |.. ..+|+.-.+-|+|||++++
T Consensus 160 ~~~~~~~~D~v~~~----~----~~~-----------------------------------~~~l~~~~~~L~~gG~l~~ 196 (258)
T 2pwy_A 160 AELEEAAYDGVALD----L----MEP-----------------------------------WKVLEKAALALKPDRFLVA 196 (258)
T ss_dssp CCCCTTCEEEEEEE----S----SCG-----------------------------------GGGHHHHHHHEEEEEEEEE
T ss_pred cCCCCCCcCEEEEC----C----cCH-----------------------------------HHHHHHHHHhCCCCCEEEE
Confidence 44788999999982 2 210 0256667788999999999
Q ss_pred Eec
Q 018250 213 SLI 215 (359)
Q Consensus 213 ~~~ 215 (359)
...
T Consensus 197 ~~~ 199 (258)
T 2pwy_A 197 YLP 199 (258)
T ss_dssp EES
T ss_pred EeC
Confidence 874
No 202
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.46 E-value=0.00012 Score=66.98 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=62.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC---CC-Cc-ccccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL---PP-RK-YYAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l---~~-~~-~~~~~vpgsfy~ 132 (359)
+.+|+|+|||+|..|+.++ +.+ .+..+|+..|+........-+.+ .- .. -+.. |+..+
T Consensus 61 ~~~VLDiG~G~G~~t~~la--------~~~------~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---gda~~ 123 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMS--------LAL------PDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRL---GPALD 123 (242)
T ss_dssp CSEEEEEESCCSHHHHHHH--------HTS------CTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEE---SCHHH
T ss_pred cCEEEEeeCCcCHHHHHHH--------HhC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHH
Confidence 4699999999999999885 322 12568999998775533222111 11 11 1222 34433
Q ss_pred CCCC------CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018250 133 RLFP------KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP 206 (359)
Q Consensus 133 ~l~p------~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 206 (359)
.+.. ++++|+||+... . .+...+|+.-.+-|+|
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~-------~----------------------------------~~~~~~l~~~~~~Lkp 162 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDAD-------K----------------------------------TNYLNYYELALKLVTP 162 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESC-------G----------------------------------GGHHHHHHHHHHHEEE
T ss_pred HHHHHhhccCCCCEeEEEEcCC-------h----------------------------------HHhHHHHHHHHHhcCC
Confidence 2211 578999987532 0 1233467777889999
Q ss_pred CceeEEEecc
Q 018250 207 GGLMVFSLIT 216 (359)
Q Consensus 207 GG~lvl~~~g 216 (359)
||++++...-
T Consensus 163 GG~lv~d~~~ 172 (242)
T 3r3h_A 163 KGLIAIDNIF 172 (242)
T ss_dssp EEEEEEECSS
T ss_pred CeEEEEECCc
Confidence 9999996543
No 203
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.45 E-value=0.00018 Score=67.13 Aligned_cols=107 Identities=9% Similarity=-0.056 Sum_probs=64.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC-------CCc-ccccccCc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP-------PRK-YYAAGVPG 128 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~-------~~~-~~~~~vpg 128 (359)
.+.+|+|+|||+|..+..++ +. .+..+++..|+-.......-+.++ ..+ -++.+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~--- 136 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREIL--------KH-------PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD--- 136 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHT--------TC-------TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES---
T ss_pred CCCEEEEECCchHHHHHHHH--------hC-------CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC---
Confidence 46899999999999888774 11 133578888876544333332221 111 12222
Q ss_pred ccccCC-CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 129 SFHGRL-FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 129 sfy~~l-~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
+..+-+ .+++++|+|++....+|.. +..+.. ..|++.-++-|+||
T Consensus 137 D~~~~l~~~~~~fD~Ii~d~~~~~~~--~~~l~~--------------------------------~~~~~~~~~~L~pg 182 (275)
T 1iy9_A 137 DGFMHIAKSENQYDVIMVDSTEPVGP--AVNLFT--------------------------------KGFYAGIAKALKED 182 (275)
T ss_dssp CSHHHHHTCCSCEEEEEESCSSCCSC--CCCCST--------------------------------THHHHHHHHHEEEE
T ss_pred cHHHHHhhCCCCeeEEEECCCCCCCc--chhhhH--------------------------------HHHHHHHHHhcCCC
Confidence 322211 2468999999977766621 211110 13677778999999
Q ss_pred ceeEEEec
Q 018250 208 GLMVFSLI 215 (359)
Q Consensus 208 G~lvl~~~ 215 (359)
|+|++...
T Consensus 183 G~lv~~~~ 190 (275)
T 1iy9_A 183 GIFVAQTD 190 (275)
T ss_dssp EEEEEECC
T ss_pred cEEEEEcC
Confidence 99999863
No 204
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.41 E-value=0.0001 Score=74.48 Aligned_cols=75 Identities=12% Similarity=0.154 Sum_probs=44.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRLF 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l~ 135 (359)
..+|+|+|||+|..++.++ +. +..+|+..|+.. .....-+.+.... --+.-+.+++.+..+
T Consensus 159 ~~~VLDiGcGtG~la~~la--------~~--------~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~ 221 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAA--------QA--------GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL 221 (480)
T ss_dssp TCEEEEESCSTTHHHHHHH--------HT--------TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred CCEEEEecCcccHHHHHHH--------Hc--------CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc
Confidence 4699999999999887663 21 235899999865 4322222211100 001222345544334
Q ss_pred CCCceeEEEecCccc
Q 018250 136 PKSTLHVVNSFNAMH 150 (359)
Q Consensus 136 p~~s~d~~~S~~alH 150 (359)
| +++|+|+|+..++
T Consensus 222 ~-~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 222 P-EQVDIIISEPMGY 235 (480)
T ss_dssp S-SCEEEEECCCCHH
T ss_pred C-CCeEEEEEeCchH
Confidence 4 6899999986643
No 205
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.41 E-value=5e-05 Score=67.61 Aligned_cols=100 Identities=10% Similarity=0.043 Sum_probs=61.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Cc-ccccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RK-YYAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~-~~~~~vpgsfy~ 132 (359)
..+|+|+|||+|..|+.++ +.+ ++..+++..|+........-+.+.. .. -+.. |++.+
T Consensus 59 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~ 121 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLA--------RGL------SSGGRVVTLEASEKHADIARSNIERANLNDRVEVRT---GLALD 121 (223)
T ss_dssp CSEEEEECCTTSHHHHHHH--------TTC------CSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHH
T ss_pred CCEEEEecCCccHHHHHHH--------HhC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHH
Confidence 5799999999999999884 222 1256899999876554443332211 11 1222 23322
Q ss_pred CC--CC---CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 133 RL--FP---KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 133 ~l--~p---~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
.+ ++ .+++|+|++....+ +...+|+.-.+-|+||
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~~-----------------------------------------~~~~~l~~~~~~L~pg 160 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADKQ-----------------------------------------NNPAYFEWALKLSRPG 160 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCGG-----------------------------------------GHHHHHHHHHHTCCTT
T ss_pred HHHHHHhcCCCCcCEEEEcCCcH-----------------------------------------HHHHHHHHHHHhcCCC
Confidence 11 11 15799998754311 2234666777899999
Q ss_pred ceeEEEec
Q 018250 208 GLMVFSLI 215 (359)
Q Consensus 208 G~lvl~~~ 215 (359)
|++++...
T Consensus 161 G~lv~~~~ 168 (223)
T 3duw_A 161 TVIIGDNV 168 (223)
T ss_dssp CEEEEESC
T ss_pred cEEEEeCC
Confidence 99988654
No 206
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.37 E-value=0.00018 Score=69.27 Aligned_cols=106 Identities=12% Similarity=0.006 Sum_probs=66.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-------Cc-ccccccCc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-------RK-YYAAGVPG 128 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-------~~-~~~~~vpg 128 (359)
.+.+|+|+|||+|..++.++ +. .|..+|+..|+........-+.++. .+ -++. +
T Consensus 120 ~~~~VLdIG~G~G~~a~~la--------~~-------~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~---~ 181 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVA--------RH-------ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI---G 181 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHT--------TC-------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE---S
T ss_pred CCCEEEEECCCccHHHHHHH--------Hc-------CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE---C
Confidence 45799999999999988774 11 2346899999876554443333321 11 1222 3
Q ss_pred ccccCC--CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018250 129 SFHGRL--FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP 206 (359)
Q Consensus 129 sfy~~l--~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 206 (359)
+..+-+ ++++++|+|++....+|- .+..+ ....|++.-.+-|+|
T Consensus 182 D~~~~l~~~~~~~fDlIi~d~~~p~~--~~~~l--------------------------------~~~~~l~~~~~~Lkp 227 (334)
T 1xj5_A 182 DGVAFLKNAAEGSYDAVIVDSSDPIG--PAKEL--------------------------------FEKPFFQSVARALRP 227 (334)
T ss_dssp CHHHHHHTSCTTCEEEEEECCCCTTS--GGGGG--------------------------------GSHHHHHHHHHHEEE
T ss_pred CHHHHHHhccCCCccEEEECCCCccC--cchhh--------------------------------hHHHHHHHHHHhcCC
Confidence 433222 356899999997654441 01000 123577788899999
Q ss_pred CceeEEEe
Q 018250 207 GGLMVFSL 214 (359)
Q Consensus 207 GG~lvl~~ 214 (359)
||+|++..
T Consensus 228 gG~lv~~~ 235 (334)
T 1xj5_A 228 GGVVCTQA 235 (334)
T ss_dssp EEEEEEEC
T ss_pred CcEEEEec
Confidence 99999874
No 207
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.37 E-value=0.00013 Score=68.12 Aligned_cols=106 Identities=15% Similarity=0.021 Sum_probs=61.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC-------------CCCc-cc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL-------------PPRK-YY 122 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l-------------~~~~-~~ 122 (359)
.+.+|+|+|||+|..++.+++ . +..+++..|+-...-...-+.+ ...+ -+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~--------~--------~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~ 138 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQ--------H--------DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKL 138 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTT--------S--------CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHh--------C--------CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEE
Confidence 457999999999999987741 1 2347777777654333322222 1111 12
Q ss_pred ccccCcccccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 018250 123 AAGVPGSFHGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAE 202 (359)
Q Consensus 123 ~~~vpgsfy~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 202 (359)
+.+-...|-.. ++++|+|++....+|-. +..+. ...|++.-++
T Consensus 139 ~~~D~~~~l~~---~~~fD~Ii~d~~~~~~~--~~~l~--------------------------------~~~~l~~~~~ 181 (281)
T 1mjf_A 139 TIGDGFEFIKN---NRGFDVIIADSTDPVGP--AKVLF--------------------------------SEEFYRYVYD 181 (281)
T ss_dssp EESCHHHHHHH---CCCEEEEEEECCCCC-------TT--------------------------------SHHHHHHHHH
T ss_pred EECchHHHhcc---cCCeeEEEECCCCCCCc--chhhh--------------------------------HHHHHHHHHH
Confidence 22211112111 57899999977665511 11110 1347777789
Q ss_pred hhccCceeEEEec
Q 018250 203 ELVPGGLMVFSLI 215 (359)
Q Consensus 203 EL~pGG~lvl~~~ 215 (359)
-|+|||++++...
T Consensus 182 ~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 182 ALNNPGIYVTQAG 194 (281)
T ss_dssp HEEEEEEEEEEEE
T ss_pred hcCCCcEEEEEcC
Confidence 9999999999864
No 208
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.34 E-value=0.00019 Score=68.14 Aligned_cols=108 Identities=14% Similarity=0.006 Sum_probs=63.5
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC-------CCc-ccccccC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP-------PRK-YYAAGVP 127 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~-------~~~-~~~~~vp 127 (359)
+.+.+|+|+|||+|..++.++ ++ .|..+++..|+-.......-+.++ ..+ -++.
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~--- 155 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVV--------KH-------PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV--- 155 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHT--------TC-------TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---
T ss_pred CCCCEEEEECCCchHHHHHHH--------Hc-------CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE---
Confidence 345799999999999998874 11 234688888887644433333222 111 1222
Q ss_pred cccccCC-CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018250 128 GSFHGRL-FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP 206 (359)
Q Consensus 128 gsfy~~l-~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 206 (359)
++..+-+ .+++++|+|++....+|- |... -....|++.-.+-|+|
T Consensus 156 ~Da~~~l~~~~~~fD~Ii~d~~~~~~---~~~~-------------------------------l~~~~~l~~~~~~Lkp 201 (304)
T 2o07_A 156 GDGFEFMKQNQDAFDVIITDSSDPMG---PAES-------------------------------LFKESYYQLMKTALKE 201 (304)
T ss_dssp SCHHHHHHTCSSCEEEEEEECC---------------------------------------------CHHHHHHHHHEEE
T ss_pred CcHHHHHhhCCCCceEEEECCCCCCC---cchh-------------------------------hhHHHHHHHHHhccCC
Confidence 2332212 256899999997766552 1100 0112477778899999
Q ss_pred CceeEEEec
Q 018250 207 GGLMVFSLI 215 (359)
Q Consensus 207 GG~lvl~~~ 215 (359)
||+|++...
T Consensus 202 gG~lv~~~~ 210 (304)
T 2o07_A 202 DGVLCCQGE 210 (304)
T ss_dssp EEEEEEEEE
T ss_pred CeEEEEecC
Confidence 999999874
No 209
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.33 E-value=0.00012 Score=68.14 Aligned_cols=121 Identities=9% Similarity=-0.039 Sum_probs=68.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|..|..++ +..+ ...+|+..|+.......+-+.+.. .. +..+.+++.+..
T Consensus 84 g~~VLDlgaG~G~~t~~la--------~~~~------~~~~v~avD~~~~~l~~~~~~~~~~g~~~--v~~~~~D~~~~~ 147 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLA--------QLMK------NKGTIVAVEISKTRTKALKSNINRMGVLN--TIIINADMRKYK 147 (274)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HHTT------TCSEEEEEESCHHHHHHHHHHHHHTTCCS--EEEEESCHHHHH
T ss_pred cCEEEEeCCCccHHHHHHH--------HHcC------CCCEEEEECCCHHHHHHHHHHHHHhCCCc--EEEEeCChHhcc
Confidence 4689999999999999885 2221 125899999887665555444321 11 111123433222
Q ss_pred C----CCCceeEEEecC---cccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 135 F----PKSTLHVVNSFN---AMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 135 ~----p~~s~d~~~S~~---alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
. +++++|+|++.. .+..+.+.|. |+ ..-......+...+|+.-.+-|+||
T Consensus 148 ~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~---------~~--------------~~~~~~~~~~~~~~l~~~~~~Lkpg 204 (274)
T 3ajd_A 148 DYLLKNEIFFDKILLDAPCSGNIIKDKNRN---------VS--------------EEDIKYCSLRQKELIDIGIDLLKKD 204 (274)
T ss_dssp HHHHHTTCCEEEEEEEECCC-----------------------------------HHHHTGGGTCHHHHHHHHHHHEEEE
T ss_pred hhhhhccccCCEEEEcCCCCCCcccccCCC---------CC--------------HHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2 367899999852 2222222220 00 0111223345677898889999999
Q ss_pred ceeEEEeccC
Q 018250 208 GLMVFSLITG 217 (359)
Q Consensus 208 G~lvl~~~g~ 217 (359)
|+|++++...
T Consensus 205 G~lv~stcs~ 214 (274)
T 3ajd_A 205 GELVYSTCSM 214 (274)
T ss_dssp EEEEEEESCC
T ss_pred CEEEEEECCC
Confidence 9999987543
No 210
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.31 E-value=0.00045 Score=66.28 Aligned_cols=113 Identities=13% Similarity=0.090 Sum_probs=67.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----C--cccccccCcccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----R--KYYAAGVPGSFH 131 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~--~~~~~~vpgsfy 131 (359)
..+|+|+|||+|..|+.++. . ..+|+..|+.......+-++... . --|+. ++..
T Consensus 154 ~~~VLDlgcGtG~~sl~la~--------~---------ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~---~D~~ 213 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAA--------A---------GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC---EDAM 213 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHH--------T---------TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC---SCHH
T ss_pred CCcEEEcccccCHHHHHHHH--------c---------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE---CcHH
Confidence 46899999999999998851 1 13889999877555444333211 1 11333 3443
Q ss_pred cCCC----CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 132 GRLF----PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 132 ~~l~----p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
+-+. ..+++|+|++.- |..-... ++.++ ...+|+..+|+.-.+-|+||
T Consensus 214 ~~l~~~~~~~~~fD~Ii~dP--------P~~~~~~------~~~~~--------------~~~~~~~~ll~~~~~~Lkpg 265 (332)
T 2igt_A 214 KFIQREERRGSTYDIILTDP--------PKFGRGT------HGEVW--------------QLFDHLPLMLDICREILSPK 265 (332)
T ss_dssp HHHHHHHHHTCCBSEEEECC--------CSEEECT------TCCEE--------------EHHHHHHHHHHHHHHTBCTT
T ss_pred HHHHHHHhcCCCceEEEECC--------ccccCCc------hHHHH--------------HHHHHHHHHHHHHHHhcCcC
Confidence 3221 157899999842 2110000 00011 13456778898888999999
Q ss_pred ceeEEEeccCC
Q 018250 208 GLMVFSLITGP 218 (359)
Q Consensus 208 G~lvl~~~g~~ 218 (359)
|+++++.....
T Consensus 266 G~lli~~~~~~ 276 (332)
T 2igt_A 266 ALGLVLTAYSI 276 (332)
T ss_dssp CCEEEEEECCT
T ss_pred cEEEEEECCCC
Confidence 99888886543
No 211
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.31 E-value=0.00037 Score=62.65 Aligned_cols=99 Identities=15% Similarity=0.103 Sum_probs=61.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc--ccccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK--YYAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..++.+++ . ..+++..|+........-+...... --+..+.+++.+.+
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~--------~---------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSE--------V---------AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHH--------H---------SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred CCCEEEEeCCCccHHHHHHHH--------h---------CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 356999999999999998852 1 1378888887655444333221000 00112234555533
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
++++++|+++++. |.. ..+|+.-.+-|+|||++++..
T Consensus 154 ~~~~~~D~v~~~~--------~~~-----------------------------------~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 154 VPEGIFHAAFVDV--------REP-----------------------------------WHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp CCTTCBSEEEECS--------SCG-----------------------------------GGGHHHHHHHBCTTCEEEEEE
T ss_pred cCCCcccEEEECC--------cCH-----------------------------------HHHHHHHHHHcCCCCEEEEEe
Confidence 4778999999831 210 014555678899999999988
Q ss_pred c
Q 018250 215 I 215 (359)
Q Consensus 215 ~ 215 (359)
.
T Consensus 191 ~ 191 (248)
T 2yvl_A 191 P 191 (248)
T ss_dssp S
T ss_pred C
Confidence 5
No 212
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.31 E-value=0.0002 Score=68.42 Aligned_cols=106 Identities=11% Similarity=-0.058 Sum_probs=65.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-------Cc-ccccccCc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-------RK-YYAAGVPG 128 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-------~~-~~~~~vpg 128 (359)
.+.+|+|+|||+|..++.++ +. .|..+++..|+........-+.++. .+ -++. +
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~---~ 177 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELC--------KY-------KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI---E 177 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHT--------TC-------TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE---S
T ss_pred CCCEEEEEcCCccHHHHHHH--------Hc-------CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE---c
Confidence 45799999999999988773 11 2346888888876554444443332 01 1222 2
Q ss_pred ccccCC-CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHH-HHHHHHHHHhhcc
Q 018250 129 SFHGRL-FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDF-ESILNARAEELVP 206 (359)
Q Consensus 129 sfy~~l-~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~-~~fL~~Ra~EL~p 206 (359)
+..+-+ .+++++|+|++...-+|- |.. ..+ ..|++.-.+-|+|
T Consensus 178 D~~~~l~~~~~~fDvIi~d~~~p~~---~~~--------------------------------~l~~~~~l~~~~~~Lkp 222 (321)
T 2pt6_A 178 DASKFLENVTNTYDVIIVDSSDPIG---PAE--------------------------------TLFNQNFYEKIYNALKP 222 (321)
T ss_dssp CHHHHHHHCCSCEEEEEEECCCSSS---GGG--------------------------------GGSSHHHHHHHHHHEEE
T ss_pred cHHHHHhhcCCCceEEEECCcCCCC---cch--------------------------------hhhHHHHHHHHHHhcCC
Confidence 332212 246789999997654441 100 001 3477778899999
Q ss_pred CceeEEEec
Q 018250 207 GGLMVFSLI 215 (359)
Q Consensus 207 GG~lvl~~~ 215 (359)
||++++...
T Consensus 223 gG~lv~~~~ 231 (321)
T 2pt6_A 223 NGYCVAQCE 231 (321)
T ss_dssp EEEEEEEEC
T ss_pred CcEEEEEcC
Confidence 999999864
No 213
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.30 E-value=8e-05 Score=69.86 Aligned_cols=79 Identities=13% Similarity=0.021 Sum_probs=49.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..|..+++ +. .+|+..|+.......+-+....... -+.-+.+++.+-.
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~--------~~---------~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~ 90 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLE--------KA---------KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD 90 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHH--------HS---------SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC
T ss_pred CCCEEEEEcCcccHHHHHHHh--------hC---------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc
Confidence 356899999999999998852 21 2778888766554444433321100 0112234554433
Q ss_pred CCCCceeEEEecCcccccCC
Q 018250 135 FPKSTLHVVNSFNAMHWLSK 154 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~ 154 (359)
+| ++|.++|+...||.+.
T Consensus 91 ~~--~fD~vv~nlpy~~~~~ 108 (285)
T 1zq9_A 91 LP--FFDTCVANLPYQISSP 108 (285)
T ss_dssp CC--CCSEEEEECCGGGHHH
T ss_pred ch--hhcEEEEecCcccchH
Confidence 44 7999999999999653
No 214
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.30 E-value=0.00026 Score=71.38 Aligned_cols=124 Identities=12% Similarity=0.140 Sum_probs=73.7
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---Ccc-cccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKY-YAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~-~~~~vpgsfy~ 132 (359)
...+|+|+|||+|..|+.+++ ... +.-+|+.+|+.......+-+++.. ..+ ++. ++...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~--------~~~------~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~---~D~~~ 179 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISA--------RMN------NEGAILANEFSASRVKVLHANISRCGISNVALTH---FDGRV 179 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHH--------HTT------TCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEEC---CCSTT
T ss_pred CCCEEEEeCCCCCHHHHHHHH--------hCC------CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CCHHH
Confidence 357999999999999998852 221 235899999988776666554421 111 222 23322
Q ss_pred CCC-CCCceeEEEe---cCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 018250 133 RLF-PKSTLHVVNS---FNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGG 208 (359)
Q Consensus 133 ~l~-p~~s~d~~~S---~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 208 (359)
-.. +++++|.|++ ++...-+.+.|..... -.++.. ......-..+|+.-++-|||||
T Consensus 180 ~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~---------------~~~~~~----~~l~~~q~~iL~~a~~~LkpGG 240 (479)
T 2frx_A 180 FGAAVPEMFDAILLDAPCSGEGVVRKDPDALKN---------------WSPESN----QEIAATQRELIDSAFHALRPGG 240 (479)
T ss_dssp HHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSS---------------CCHHHH----HHHHHHHHHHHHHHHHHEEEEE
T ss_pred hhhhccccCCEEEECCCcCCcccccCCHHHHhh---------------cCHhHH----HHHHHHHHHHHHHHHHhcCCCC
Confidence 111 4578999998 3334333444432110 011111 1222234567888889999999
Q ss_pred eeEEEecc
Q 018250 209 LMVFSLIT 216 (359)
Q Consensus 209 ~lvl~~~g 216 (359)
+||.++..
T Consensus 241 ~LvysTcs 248 (479)
T 2frx_A 241 TLVYSTCT 248 (479)
T ss_dssp EEEEEESC
T ss_pred EEEEeccc
Confidence 99998754
No 215
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.29 E-value=0.00096 Score=60.70 Aligned_cols=45 Identities=9% Similarity=0.040 Sum_probs=33.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL 116 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l 116 (359)
...+|+|+|||||..++.++ +. .|..+|+..|.-.......-+++
T Consensus 15 ~g~~VlDIGtGsG~l~i~la--------~~-------~~~~~V~avDi~~~al~~A~~N~ 59 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELV--------ER-------GQIKSAIAGEVVEGPYQSAVKNV 59 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHH--------HT-------TSEEEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHH--------Hh-------CCCCEEEEEECCHHHHHHHHHHH
Confidence 34799999999999999885 22 24458999999876665554443
No 216
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.28 E-value=0.00024 Score=67.77 Aligned_cols=109 Identities=14% Similarity=-0.003 Sum_probs=62.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cc---cccccCcccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KY---YAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~---~~~~vpgsfy 131 (359)
.+.+|+|+|||+|..++.++ +. .|..+++..|+-.......-+.++.. .. -+.-+.++..
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~ 172 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVL--------KH-------ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGF 172 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHT--------TC-------TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHH
T ss_pred CCCEEEEEcCCcCHHHHHHH--------Hc-------CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHH
Confidence 45799999999999998874 11 23468888888764444433333310 00 0111123332
Q ss_pred cCC-CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 132 GRL-FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 132 ~~l-~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
+-+ .+++++|+|++...-||- .+..+ |. ..|++.-++-|+|||+|
T Consensus 173 ~~l~~~~~~fD~Ii~d~~~~~~--~~~~l-------------------------~t-------~~~l~~~~~~LkpgG~l 218 (314)
T 2b2c_A 173 EFLKNHKNEFDVIITDSSDPVG--PAESL-------------------------FG-------QSYYELLRDALKEDGIL 218 (314)
T ss_dssp HHHHHCTTCEEEEEECCC-----------------------------------------------HHHHHHHHEEEEEEE
T ss_pred HHHHhcCCCceEEEEcCCCCCC--cchhh-------------------------hH-------HHHHHHHHhhcCCCeEE
Confidence 212 257899999997654441 00000 00 34777888999999999
Q ss_pred EEEe
Q 018250 211 VFSL 214 (359)
Q Consensus 211 vl~~ 214 (359)
++..
T Consensus 219 v~~~ 222 (314)
T 2b2c_A 219 SSQG 222 (314)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9986
No 217
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.27 E-value=0.00012 Score=65.15 Aligned_cols=100 Identities=12% Similarity=0.064 Sum_probs=61.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----C-cccccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----R-KYYAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~-~~~~~~vpgsfy~ 132 (359)
..+|+|+|||+|..|+.++ +.+ ++..+++..|+........-+.+.. . --+.. ++..+
T Consensus 65 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~ 127 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMG--------LAL------PKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL---SPAKD 127 (225)
T ss_dssp CSEEEEECCTTSHHHHHHH--------TTC------CTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHH
T ss_pred CCEEEEeCCcchHHHHHHH--------HhC------CCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---CCHHH
Confidence 4699999999999999884 221 1256899999876555444333211 1 11222 23322
Q ss_pred CC--CCC----CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018250 133 RL--FPK----STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP 206 (359)
Q Consensus 133 ~l--~p~----~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 206 (359)
.+ ++. +++|+|++.. | . .+...+|+.-.+-|+|
T Consensus 128 ~~~~~~~~~~~~~fD~v~~~~---~-----~---------------------------------~~~~~~l~~~~~~L~p 166 (225)
T 3tr6_A 128 TLAELIHAGQAWQYDLIYIDA---D-----K---------------------------------ANTDLYYEESLKLLRE 166 (225)
T ss_dssp HHHHHHTTTCTTCEEEEEECS---C-----G---------------------------------GGHHHHHHHHHHHEEE
T ss_pred HHHHhhhccCCCCccEEEECC---C-----H---------------------------------HHHHHHHHHHHHhcCC
Confidence 21 111 7899998533 1 0 1334467777789999
Q ss_pred CceeEEEec
Q 018250 207 GGLMVFSLI 215 (359)
Q Consensus 207 GG~lvl~~~ 215 (359)
||++++.-.
T Consensus 167 gG~lv~~~~ 175 (225)
T 3tr6_A 167 GGLIAVDNV 175 (225)
T ss_dssp EEEEEEECS
T ss_pred CcEEEEeCC
Confidence 999998654
No 218
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.26 E-value=8.7e-05 Score=67.10 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=60.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC---C-Ccc-cccccC-----
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP---P-RKY-YAAGVP----- 127 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~---~-~~~-~~~~vp----- 127 (359)
..+|+|+|||+|..|+.++ +..+ +..+++..|.........-+.+. - ..+ +..+-.
T Consensus 61 ~~~VLdiG~G~G~~~~~la--------~~~~------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 126 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFA--------SALP------EDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQ 126 (239)
T ss_dssp CSEEEEECCTTCHHHHHHH--------HHSC------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHH--------HhCC------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHH
Confidence 4689999999999999885 2221 13577777776544333222211 0 101 111100
Q ss_pred -------cccccCCCCC--CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHH
Q 018250 128 -------GSFHGRLFPK--STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILN 198 (359)
Q Consensus 128 -------gsfy~~l~p~--~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~ 198 (359)
.+....-||+ +++|+|++.... .++..+|+
T Consensus 127 ~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~-----------------------------------------~~~~~~l~ 165 (239)
T 2hnk_A 127 VLIDSKSAPSWASDFAFGPSSIDLFFLDADK-----------------------------------------ENYPNYYP 165 (239)
T ss_dssp HHHHCSSCCGGGTTTCCSTTCEEEEEECSCG-----------------------------------------GGHHHHHH
T ss_pred HHHhhcccccccccccCCCCCcCEEEEeCCH-----------------------------------------HHHHHHHH
Confidence 0112344666 899999986321 12334667
Q ss_pred HHHHhhccCceeEEEec
Q 018250 199 ARAEELVPGGLMVFSLI 215 (359)
Q Consensus 199 ~Ra~EL~pGG~lvl~~~ 215 (359)
.-.+-|+|||++++...
T Consensus 166 ~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 166 LILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHHHEEEEEEEEEECS
T ss_pred HHHHHcCCCeEEEEEcc
Confidence 77889999999999764
No 219
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.26 E-value=0.0012 Score=60.25 Aligned_cols=103 Identities=9% Similarity=0.011 Sum_probs=64.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l 134 (359)
+..+|+|+|||||..++.++ +. .|...|+..|+........-+++..... -+...-|+..+-+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la--------~~-------~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~ 85 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLL--------QM-------GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF 85 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHH--------HT-------TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC
T ss_pred CCCEEEEECCchHHHHHHHH--------Hh-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc
Confidence 34799999999999999885 22 2345899999988776666555421000 1122234555555
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
.|.+.+|++++. ++ | ..-...+|....+-|+++|+|+++-
T Consensus 86 ~~~~~~D~Ivia-----------Gm----------G-------------------g~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 86 EEADNIDTITIC-----------GM----------G-------------------GRLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp CGGGCCCEEEEE-----------EE----------C-------------------HHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ccccccCEEEEe-----------CC----------c-------------------hHHHHHHHHHHHHHhCcCCEEEEEC
Confidence 555568877741 00 0 0124457777677789999888776
No 220
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.25 E-value=0.00018 Score=65.96 Aligned_cols=100 Identities=9% Similarity=0.157 Sum_probs=61.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Ccc-cccccCcccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKY-YAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~-~~~~vpgsfy 131 (359)
++.+|+|+|||+|..|+.++ +.. ++..+++..|.........-+.+.. ..+ +.. |+..
T Consensus 79 ~~~~VLeiG~G~G~~~~~la--------~~~------~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~---gda~ 141 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATA--------LAI------PEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPAL 141 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHH--------HHS------CTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHH
T ss_pred CcCEEEEeCCCcCHHHHHHH--------HhC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE---CCHH
Confidence 35699999999999999885 332 1246899999877554433332211 111 222 2333
Q ss_pred cCC--C-----CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018250 132 GRL--F-----PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEEL 204 (359)
Q Consensus 132 ~~l--~-----p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 204 (359)
+.+ + +++++|++|+... . .+...+|+.-.+-|
T Consensus 142 ~~l~~l~~~~~~~~~fD~V~~d~~---~--------------------------------------~~~~~~l~~~~~~L 180 (247)
T 1sui_A 142 PVLDEMIKDEKNHGSYDFIFVDAD---K--------------------------------------DNYLNYHKRLIDLV 180 (247)
T ss_dssp HHHHHHHHSGGGTTCBSEEEECSC---S--------------------------------------TTHHHHHHHHHHHB
T ss_pred HHHHHHHhccCCCCCEEEEEEcCc---h--------------------------------------HHHHHHHHHHHHhC
Confidence 221 1 2678999998532 0 02234666667889
Q ss_pred ccCceeEEEe
Q 018250 205 VPGGLMVFSL 214 (359)
Q Consensus 205 ~pGG~lvl~~ 214 (359)
+|||++++..
T Consensus 181 kpGG~lv~d~ 190 (247)
T 1sui_A 181 KVGGVIGYDN 190 (247)
T ss_dssp CTTCCEEEEC
T ss_pred CCCeEEEEec
Confidence 9999999864
No 221
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.23 E-value=0.0002 Score=66.76 Aligned_cols=117 Identities=15% Similarity=0.117 Sum_probs=72.2
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCc-----cc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPG-----SF 130 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpg-----sf 130 (359)
+.+.+|+|||||.|+.|+.++. ..|..+++..|.-...-.-+-..+. ..+++. ++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~---------------~~p~a~y~a~DId~~~le~a~~~l~-----~~g~~~~~~v~D~ 190 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMG---------------LPAETVYIASDIDARLVGFVDEALT-----RLNVPHRTNVADL 190 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTT---------------CCTTCEEEEEESBHHHHHHHHHHHH-----HTTCCEEEEECCT
T ss_pred CCCceeeeeccCccHHHHHHHh---------------hCCCCEEEEEeCCHHHHHHHHHHHH-----hcCCCceEEEeee
Confidence 3478999999999999998841 2467899999987644333322221 112222 22
Q ss_pred ccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeec-------CCCHHHHHHHHHHHHHHH
Q 018250 131 HGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCT-------RFMKGVHETFQAQFRSDF 193 (359)
Q Consensus 131 y~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~-------~~~~~~~~~y~~Q~~~D~ 193 (359)
-.. .|+...|++.++-++|-|.+-.+...=..-.++|-|.|.++ +.++...+-|.++|.++.
T Consensus 191 ~~~-~p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~ 259 (281)
T 3lcv_B 191 LED-RLDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQA 259 (281)
T ss_dssp TTS-CCCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHH
T ss_pred ccc-CCCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHH
Confidence 222 37789999999999999965444321134456677777754 135666667776665544
No 222
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.20 E-value=0.00027 Score=66.12 Aligned_cols=108 Identities=9% Similarity=-0.094 Sum_probs=65.4
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-------Cc-ccccccC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-------RK-YYAAGVP 127 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-------~~-~~~~~vp 127 (359)
+.+.+|+|+|||+|..+..++ +. .|..+++..|+-.......-+.++. .+ -++.
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~--------~~-------~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~--- 138 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELC--------KY-------KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI--- 138 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHT--------TC-------TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE---
T ss_pred CCCCeEEEEeCCcCHHHHHHH--------Hc-------CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE---
Confidence 345799999999999988773 11 2345788888866444433333331 11 1222
Q ss_pred cccccCC-CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018250 128 GSFHGRL-FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP 206 (359)
Q Consensus 128 gsfy~~l-~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 206 (359)
++..+-+ ..++++|+|++....+|.. +..+.. ..|++.-++-|+|
T Consensus 139 ~D~~~~l~~~~~~fD~Ii~d~~~~~~~--~~~l~~--------------------------------~~~l~~~~~~L~p 184 (283)
T 2i7c_A 139 EDASKFLENVTNTYDVIIVDSSDPIGP--AETLFN--------------------------------QNFYEKIYNALKP 184 (283)
T ss_dssp SCHHHHHHHCCSCEEEEEEECCCTTTG--GGGGSS--------------------------------HHHHHHHHHHEEE
T ss_pred CChHHHHHhCCCCceEEEEcCCCCCCc--chhhhH--------------------------------HHHHHHHHHhcCC
Confidence 2322211 1267899999977666521 111100 3477888899999
Q ss_pred CceeEEEec
Q 018250 207 GGLMVFSLI 215 (359)
Q Consensus 207 GG~lvl~~~ 215 (359)
||+|++...
T Consensus 185 gG~lv~~~~ 193 (283)
T 2i7c_A 185 NGYCVAQCE 193 (283)
T ss_dssp EEEEEEECC
T ss_pred CcEEEEECC
Confidence 999998854
No 223
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.18 E-value=0.00077 Score=67.22 Aligned_cols=125 Identities=11% Similarity=0.087 Sum_probs=71.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|..|..++ +..+ ...+++..|+.......+-+.+.. .. +..+.+++....
T Consensus 260 g~~VLDlgaG~G~~t~~la--------~~~~------~~~~v~a~D~s~~~l~~~~~~~~~~g~~~--v~~~~~D~~~~~ 323 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLA--------ELMK------NKGKIYAFDVDKMRMKRLKDFVKRMGIKI--VKPLVKDARKAP 323 (450)
T ss_dssp TCEEEESSCTTCHHHHHHH--------HHTT------TCSEEEEECSCHHHHHHHHHHHHHTTCCS--EEEECSCTTCCS
T ss_pred cCEEEEeCCCccHHHHHHH--------HHcC------CCCEEEEEcCCHHHHHHHHHHHHHcCCCc--EEEEEcChhhcc
Confidence 4689999999999999885 2221 125899999987665555444321 11 111223443322
Q ss_pred --CCCCceeEEEe---cCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCce
Q 018250 135 --FPKSTLHVVNS---FNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGL 209 (359)
Q Consensus 135 --~p~~s~d~~~S---~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 209 (359)
++++++|.|++ ++.+.-+.+.|..... .++..+ ......-..+|+.-++-|+|||+
T Consensus 324 ~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~--------------~~~~~~-----~~l~~~q~~iL~~a~~~LkpGG~ 384 (450)
T 2yxl_A 324 EIIGEEVADKVLLDAPCTSSGTIGKNPELRWR--------------LREDKI-----NEMSQLQRELLESAARLVKPGGR 384 (450)
T ss_dssp SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHH--------------CCTTSH-----HHHHHHHHHHHHHHHTTEEEEEE
T ss_pred hhhccCCCCEEEEcCCCCCCeeeccChhhhhh--------------CCHHHH-----HHHHHHHHHHHHHHHHhcCCCcE
Confidence 56688999997 2333333333332110 011111 11112225678888899999999
Q ss_pred eEEEeccC
Q 018250 210 MVFSLITG 217 (359)
Q Consensus 210 lvl~~~g~ 217 (359)
|++++...
T Consensus 385 lvy~tcs~ 392 (450)
T 2yxl_A 385 LLYTTCSI 392 (450)
T ss_dssp EEEEESCC
T ss_pred EEEEeCCC
Confidence 99887643
No 224
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.17 E-value=0.00025 Score=71.23 Aligned_cols=127 Identities=15% Similarity=0.067 Sum_probs=73.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCC-C
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRL-F 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l-~ 135 (359)
...+|+|+|||+|..|+.++ +..+ ..-+|+.+|+.......+-+++....+-+..+-++..... +
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA--------~~~~------~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLA--------ARMG------GKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEA 166 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHH--------HHTT------TCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHH--------HhCC------CCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhh
Confidence 35799999999999999885 3321 2358999999887766655544320000222223433222 2
Q ss_pred CCCceeEEEec---CcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 136 PKSTLHVVNSF---NAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 136 p~~s~d~~~S~---~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
.++++|.|++. +..--+.+.|.... ..++..+. ...+....+|+.-++-|+|||+|+.
T Consensus 167 ~~~~FD~Il~D~PcSg~G~~rr~pd~~~--------------~~~~~~~~-----~l~~~Q~~iL~~a~~~LkpGG~Lvy 227 (464)
T 3m6w_A 167 FGTYFHRVLLDAPCSGEGMFRKDREAAR--------------HWGPSAPK-----RMAEVQKALLAQASRLLGPGGVLVY 227 (464)
T ss_dssp HCSCEEEEEEECCCCCGGGTTTCTTSGG--------------GCCTTHHH-----HHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccCCEEEECCCcCCccccccChHHhh--------------hcCHHHHH-----HHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 36799999962 22222233332211 01122221 2223446788888899999999998
Q ss_pred Eecc
Q 018250 213 SLIT 216 (359)
Q Consensus 213 ~~~g 216 (359)
++..
T Consensus 228 sTCs 231 (464)
T 3m6w_A 228 STCT 231 (464)
T ss_dssp EESC
T ss_pred Eecc
Confidence 7753
No 225
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.14 E-value=0.00068 Score=59.15 Aligned_cols=75 Identities=12% Similarity=-0.053 Sum_probs=46.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..++.+. +. +.-+++..|+........-+... +--++ .+++.+ +|
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~--------~~--------~~~~v~~vD~~~~~~~~a~~~~~-~~~~~---~~d~~~--~~ 108 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSY--------LL--------GAESVTAFDIDPDAIETAKRNCG-GVNFM---VADVSE--IS 108 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHH--------HT--------TBSEEEEEESCHHHHHHHHHHCT-TSEEE---ECCGGG--CC
T ss_pred CCCEEEEEeCCccHHHHHHH--------Hc--------CCCEEEEEECCHHHHHHHHHhcC-CCEEE---ECcHHH--CC
Confidence 45799999999999988774 21 12368999987655544444333 11122 235544 34
Q ss_pred CCceeEEEecCcccccCC
Q 018250 137 KSTLHVVNSFNAMHWLSK 154 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~ 154 (359)
+++|+++++-.+||++.
T Consensus 109 -~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 109 -GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp -CCEEEEEECCCC-----
T ss_pred -CCeeEEEECCCchhccC
Confidence 79999999999999653
No 226
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.14 E-value=0.00014 Score=64.32 Aligned_cols=102 Identities=11% Similarity=-0.003 Sum_probs=60.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCC--cccccccCcccccCC-
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPR--KYYAAGVPGSFHGRL- 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~--~~~~~~vpgsfy~~l- 134 (359)
+.+|+|+|||+|..|+.++ +.. .+..+++..|+........-+.+... .--+.-+.++..+.+
T Consensus 57 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 122 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFA--------RAI------SISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAA 122 (210)
T ss_dssp CSEEEEESCGGGHHHHHHH--------TTS------CTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHT
T ss_pred CCEEEEEcCCccHHHHHHH--------HhC------CCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhc
Confidence 4689999999999999874 221 11468999998764443333222110 000111223443321
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
..++ +|++++... . .+...+|+.-.+-|+|||++++..
T Consensus 123 ~~~~-fD~v~~~~~--------~---------------------------------~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 123 GQRD-IDILFMDCD--------V---------------------------------FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TCCS-EEEEEEETT--------T---------------------------------SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred cCCC-CCEEEEcCC--------h---------------------------------hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 2245 999998621 0 023456777788999999999854
Q ss_pred c
Q 018250 215 I 215 (359)
Q Consensus 215 ~ 215 (359)
.
T Consensus 161 ~ 161 (210)
T 3c3p_A 161 A 161 (210)
T ss_dssp S
T ss_pred c
Confidence 3
No 227
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.13 E-value=0.0022 Score=55.97 Aligned_cols=78 Identities=17% Similarity=0.117 Sum_probs=49.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..++.+. +. ..-+++..|+.......+-+.......-+.-+.+++.+ +|
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~--------~~--------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~--~~ 110 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGAL--------LL--------GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE--FN 110 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT--------TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG--CC
T ss_pred CcCEEEEeeCCCCHHHHHHH--------Hc--------CCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH--cC
Confidence 35689999999999988774 21 01278999987655554444433211112222345544 24
Q ss_pred CCceeEEEecCcccccC
Q 018250 137 KSTLHVVNSFNAMHWLS 153 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs 153 (359)
+++|+++++-.+|+.+
T Consensus 111 -~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 111 -SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp -CCCSEEEECCCCSSSS
T ss_pred -CCCCEEEEcCCCcccc
Confidence 5899999998888855
No 228
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.10 E-value=0.00059 Score=61.84 Aligned_cols=101 Identities=8% Similarity=0.073 Sum_probs=61.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Ccc-cccccCcccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKY-YAAGVPGSFH 131 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~-~~~~vpgsfy 131 (359)
++.+|+|+|||+|..|+.++ +.. ++..+++..|+........-+.+.. ..+ +.. |+..
T Consensus 70 ~~~~VLeiG~G~G~~~~~la--------~~~------~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---gda~ 132 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTA--------LSI------PDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE---SDAM 132 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHH--------HHS------CTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHH
T ss_pred CCCEEEEeCCCCCHHHHHHH--------HhC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHH
Confidence 35699999999999999885 222 1246888888866444333222211 111 222 2332
Q ss_pred cC---C----CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018250 132 GR---L----FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEEL 204 (359)
Q Consensus 132 ~~---l----~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL 204 (359)
+. + ++++++|++|+.. |. .+...||+.-.+-|
T Consensus 133 ~~l~~l~~~~~~~~~fD~I~~d~---~~--------------------------------------~~~~~~l~~~~~~L 171 (237)
T 3c3y_A 133 LALDNLLQGQESEGSYDFGFVDA---DK--------------------------------------PNYIKYHERLMKLV 171 (237)
T ss_dssp HHHHHHHHSTTCTTCEEEEEECS---CG--------------------------------------GGHHHHHHHHHHHE
T ss_pred HHHHHHHhccCCCCCcCEEEECC---ch--------------------------------------HHHHHHHHHHHHhc
Confidence 21 1 1367899999742 20 12345677777899
Q ss_pred ccCceeEEEec
Q 018250 205 VPGGLMVFSLI 215 (359)
Q Consensus 205 ~pGG~lvl~~~ 215 (359)
+|||++++...
T Consensus 172 ~pGG~lv~d~~ 182 (237)
T 3c3y_A 172 KVGGIVAYDNT 182 (237)
T ss_dssp EEEEEEEEECT
T ss_pred CCCeEEEEecC
Confidence 99999998654
No 229
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.10 E-value=0.00025 Score=66.47 Aligned_cols=68 Identities=18% Similarity=0.193 Sum_probs=42.5
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----C-cccccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----R-KYYAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~-~~~~~~vpgsfy~ 132 (359)
..+|+|+|||+|..++.++ +. |..+|+..|+........-++... . --|+. +++.+
T Consensus 124 ~~~vLDlG~GsG~~~~~la--------~~--------~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~---~D~~~ 184 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVA--------KF--------SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRK---GEFLE 184 (284)
T ss_dssp CCEEEEESCTTSHHHHHHH--------HH--------SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEE---SSTTG
T ss_pred CCEEEEEeCchhHHHHHHH--------HC--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE---Ccchh
Confidence 3589999999999999884 22 246899999876554443333211 1 11222 34443
Q ss_pred CCCCCCce---eEEEec
Q 018250 133 RLFPKSTL---HVVNSF 146 (359)
Q Consensus 133 ~l~p~~s~---d~~~S~ 146 (359)
.++ +++ |+|+|+
T Consensus 185 -~~~-~~f~~~D~Ivsn 199 (284)
T 1nv8_A 185 -PFK-EKFASIEMILSN 199 (284)
T ss_dssp -GGG-GGTTTCCEEEEC
T ss_pred -hcc-cccCCCCEEEEc
Confidence 223 478 999997
No 230
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.09 E-value=0.00035 Score=64.39 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=64.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~ 133 (359)
.+.+|+|+|||+|+.++.++ +...++..|+-...-..+-..+.. .--+.. .++...
T Consensus 105 ~p~~VLDlGCG~gpLal~~~------------------~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v---~D~~~~ 163 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER------------------GIASVWGCDIHQGLGDVITPFAREKDWDFTFAL---QDVLCA 163 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT------------------TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEE---CCTTTS
T ss_pred CCCeEEEecCCccHHHHHhc------------------cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEE---eecccC
Confidence 46799999999999998773 346788888776444433222210 000111 133344
Q ss_pred CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeec-------CCCHHHHHHHHHHHH
Q 018250 134 LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCT-------RFMKGVHETFQAQFR 190 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~-------~~~~~~~~~y~~Q~~ 190 (359)
. |+.+.|++.++-++|-|.+..+......-.++|.+.|.++ +.+|...+-|.++|+
T Consensus 164 ~-~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e 226 (253)
T 3frh_A 164 P-PAEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFE 226 (253)
T ss_dssp C-CCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEECC-----------CHHHHHH
T ss_pred C-CCCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHH
Confidence 4 4569999999999999976665533333345666666653 123444455555443
No 231
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.07 E-value=0.00062 Score=63.20 Aligned_cols=101 Identities=11% Similarity=-0.019 Sum_probs=63.7
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----CcccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKYYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~~~~~vpgsfy~ 132 (359)
...+|+|+|||+|..|+.++ +.. +..+|+..|+.......+-++... +..|+.+ ++.+
T Consensus 119 ~~~~VLDlgcG~G~~s~~la--------~~~-------~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~---d~~~ 180 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLA--------KYS-------KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILA---DNRD 180 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHH--------HHT-------CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEES---CGGG
T ss_pred CCCEEEEecCcCCHHHHHHH--------HhC-------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEEC---ChHH
Confidence 35689999999999999885 332 235899999876555444333211 1224443 4433
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
- -.++++|++++.... .. ..+|..-.+.|+|||++++
T Consensus 181 ~-~~~~~~D~Vi~d~p~--------~~----------------------------------~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 181 V-ELKDVADRVIMGYVH--------KT----------------------------------HKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp C-CCTTCEEEEEECCCS--------SG----------------------------------GGGHHHHHHHEEEEEEEEE
T ss_pred c-CccCCceEEEECCcc--------cH----------------------------------HHHHHHHHHHcCCCCEEEE
Confidence 2 115789999885321 11 1245555678999999999
Q ss_pred EeccCC
Q 018250 213 SLITGP 218 (359)
Q Consensus 213 ~~~g~~ 218 (359)
+.....
T Consensus 218 s~~~~~ 223 (272)
T 3a27_A 218 HETVAE 223 (272)
T ss_dssp EEEEEG
T ss_pred EEcCcc
Confidence 887654
No 232
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.00 E-value=0.0014 Score=62.71 Aligned_cols=128 Identities=12% Similarity=0.001 Sum_probs=70.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..++.+.+.+ +... ....+++..|+-.......-..+.....-+.-+.|++.. ..+
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~--------~~~~--~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~ 198 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQL--------ELKG--DVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLL 198 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHH--------HTTS--SCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHH--------HHhc--CCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccc
Confidence 46899999999999998875332 1100 113688999986544333222211000001112234433 235
Q ss_pred CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHH-HHHHHHHHHhhccCceeEEEec
Q 018250 137 KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDF-ESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 137 ~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~-~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
...+|+|+++-.++|...- . .. ..|..+ .+. ...|. ..|+..-.+-|+|||++++.+.
T Consensus 199 ~~~fD~Ii~NPPfg~~~~~-~-~~----~~~~~~------~~~---------g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 199 VDPVDVVISDLPVGYYPDD-E-NA----KTFELC------REE---------GHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CCCEEEEEEECCCSEESCH-H-HH----TTSTTC------CSS---------SCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCccEEEECCCCCCcCch-h-hh----hhcccc------CCC---------CcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 6889999999887764321 0 00 001000 000 01122 2477777889999999999985
Q ss_pred c
Q 018250 216 T 216 (359)
Q Consensus 216 g 216 (359)
.
T Consensus 258 ~ 258 (344)
T 2f8l_A 258 D 258 (344)
T ss_dssp G
T ss_pred c
Confidence 3
No 233
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.92 E-value=0.00073 Score=66.41 Aligned_cols=108 Identities=15% Similarity=0.100 Sum_probs=66.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|..|+.++. . ...|+..|+.......+-+++.. ..-+.. ++..+-+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~--------~---------ga~V~avDis~~al~~a~~n~~~ng~~~~~~~---~D~~~~l 274 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAAR--------K---------GAYALAVDKDLEALGVLDQAALRLGLRVDIRH---GEALPTL 274 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEE---SCHHHHH
T ss_pred CCeEEEcccchhHHHHHHHH--------c---------CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEE---ccHHHHH
Confidence 46899999999999998852 1 12488999887665544433211 111222 2333222
Q ss_pred --CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 135 --FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 135 --~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
++.. +|+|++. .|. ... +... .....+++..++..-.+-|+|||+|++
T Consensus 275 ~~~~~~-fD~Ii~d--------pP~-f~~---------------~~~~-----~~~~~~~~~~ll~~a~~~LkpGG~Lv~ 324 (393)
T 4dmg_A 275 RGLEGP-FHHVLLD--------PPT-LVK---------------RPEE-----LPAMKRHLVDLVREALRLLAEEGFLWL 324 (393)
T ss_dssp HTCCCC-EEEEEEC--------CCC-CCS---------------SGGG-----HHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred HHhcCC-CCEEEEC--------CCc-CCC---------------CHHH-----HHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1334 9999974 222 111 0111 234556788899999999999999996
Q ss_pred Eec
Q 018250 213 SLI 215 (359)
Q Consensus 213 ~~~ 215 (359)
...
T Consensus 325 ~s~ 327 (393)
T 4dmg_A 325 SSC 327 (393)
T ss_dssp EEC
T ss_pred EEC
Confidence 654
No 234
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.91 E-value=0.0003 Score=63.48 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=60.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC--CcccccccCccccc---
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP--RKYYAAGVPGSFHG--- 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~--~~~~~~~vpgsfy~--- 132 (359)
..+|+|+|||+|..|+.++ +.+ .+..+++..|.........-+.+.. -.--+.-+.|++.+
T Consensus 73 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~ 138 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMA--------LQL------PPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLE 138 (232)
T ss_dssp CCEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHH--------HhC------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH
Confidence 4689999999999999884 221 1245888999876443333222210 00001111233322
Q ss_pred CC-CCC--CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCce
Q 018250 133 RL-FPK--STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGL 209 (359)
Q Consensus 133 ~l-~p~--~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 209 (359)
.+ +++ +++|++|+.... .++..+|+.-.+-|+|||+
T Consensus 139 ~l~~~~~~~~fD~V~~d~~~-----------------------------------------~~~~~~l~~~~~~LkpgG~ 177 (232)
T 3cbg_A 139 QLTQGKPLPEFDLIFIDADK-----------------------------------------RNYPRYYEIGLNLLRRGGL 177 (232)
T ss_dssp HHHTSSSCCCEEEEEECSCG-----------------------------------------GGHHHHHHHHHHTEEEEEE
T ss_pred HHHhcCCCCCcCEEEECCCH-----------------------------------------HHHHHHHHHHHHHcCCCeE
Confidence 22 223 789999975320 1233466677789999999
Q ss_pred eEEEec
Q 018250 210 MVFSLI 215 (359)
Q Consensus 210 lvl~~~ 215 (359)
+++...
T Consensus 178 lv~~~~ 183 (232)
T 3cbg_A 178 MVIDNV 183 (232)
T ss_dssp EEEECT
T ss_pred EEEeCC
Confidence 999654
No 235
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.88 E-value=0.00045 Score=61.49 Aligned_cols=100 Identities=15% Similarity=0.099 Sum_probs=60.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----Cc-ccccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RK-YYAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~-~~~~~vpgsfy~ 132 (359)
..+|+|+|||+|..|+.++ +.. .+..+++..|+........-+.+.. .. -+.. +++.+
T Consensus 70 ~~~vLdiG~G~G~~~~~la--------~~~------~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~ 132 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALA--------LAL------PADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALE 132 (229)
T ss_dssp CCEEEEECCTTSHHHHHHH--------TTS------CTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHH
T ss_pred CCEEEEEcCCccHHHHHHH--------HhC------CCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE---cCHHH
Confidence 4699999999999998884 221 1246899999876554433322211 11 1222 23322
Q ss_pred CC--CCC----CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 018250 133 RL--FPK----STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVP 206 (359)
Q Consensus 133 ~l--~p~----~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~p 206 (359)
.+ +++ +++|++++... . .+...+|+.-.+-|+|
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~--------~---------------------------------~~~~~~l~~~~~~L~p 171 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDAD--------K---------------------------------ENCSAYYERCLQLLRP 171 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSC--------S---------------------------------TTHHHHHHHHHHHEEE
T ss_pred HHHHHHhcCCCCCccEEEECCC--------H---------------------------------HHHHHHHHHHHHHcCC
Confidence 11 111 68999998432 0 1233466677788999
Q ss_pred CceeEEEec
Q 018250 207 GGLMVFSLI 215 (359)
Q Consensus 207 GG~lvl~~~ 215 (359)
||++++...
T Consensus 172 gG~lv~~~~ 180 (229)
T 2avd_A 172 GGILAVLRV 180 (229)
T ss_dssp EEEEEEECC
T ss_pred CeEEEEECC
Confidence 999998543
No 236
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.82 E-value=0.0049 Score=59.90 Aligned_cols=110 Identities=11% Similarity=0.022 Sum_probs=65.5
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---Cc-ccccccCcccccC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RK-YYAAGVPGSFHGR 133 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~-~~~~~vpgsfy~~ 133 (359)
..+|+|+|||+|..|+.++.. ..+|+..|+.......+-++... .. -|+. ++..+-
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~-----------------~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~---~d~~~~ 269 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG-----------------FREVVAVDSSAEALRRAEENARLNGLGNVRVLE---ANAFDL 269 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH-----------------EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEE---SCHHHH
T ss_pred CCeEEEeeeccCHHHHHHHHh-----------------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEE---CCHHHH
Confidence 468999999999999988631 13677777765443333222110 11 1222 233322
Q ss_pred CC----CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCce
Q 018250 134 LF----PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGL 209 (359)
Q Consensus 134 l~----p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~ 209 (359)
+. +++++|+|++ +.|..... + .. .....+++..+|..-.+-|+|||+
T Consensus 270 ~~~~~~~~~~fD~Ii~--------dpP~~~~~-------~---------~~-----~~~~~~~~~~~l~~~~~~LkpgG~ 320 (382)
T 1wxx_A 270 LRRLEKEGERFDLVVL--------DPPAFAKG-------K---------KD-----VERAYRAYKEVNLRAIKLLKEGGI 320 (382)
T ss_dssp HHHHHHTTCCEEEEEE--------CCCCSCCS-------T---------TS-----HHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHhcCCCeeEEEE--------CCCCCCCC-------h---------hH-----HHHHHHHHHHHHHHHHHhcCCCCE
Confidence 21 2578999997 22321111 0 01 123456788899999999999999
Q ss_pred eEEEecc
Q 018250 210 MVFSLIT 216 (359)
Q Consensus 210 lvl~~~g 216 (359)
|+++...
T Consensus 321 l~~~~~~ 327 (382)
T 1wxx_A 321 LATASCS 327 (382)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9998753
No 237
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.80 E-value=0.0061 Score=59.32 Aligned_cols=121 Identities=16% Similarity=0.287 Sum_probs=67.5
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPK 137 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~ 137 (359)
..+|+|+|||+|..++.+++ ++. +..+++..|+-....... . . +..+.+++.. ..++
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~--------~~~------~~~~i~gvDi~~~~~~~a-----~-~--~~~~~~D~~~-~~~~ 96 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFRE--------AHG------TAYRFVGVEIDPKALDLP-----P-W--AEGILADFLL-WEPG 96 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHH--------HHC------SCSEEEEEESCTTTCCCC-----T-T--EEEEESCGGG-CCCS
T ss_pred CCEEEECCCCChHHHHHHHH--------HhC------CCCeEEEEECCHHHHHhC-----C-C--CcEEeCChhh-cCcc
Confidence 45999999999998887752 221 235788888865432111 0 1 1112245543 3356
Q ss_pred CceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHH------HHHHHHHHHHHHHhhccCceeE
Q 018250 138 STLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQF------RSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 138 ~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~------~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
+++|+|+++=-........ .++ .+.+++..+.|...+ ...+..|+..-.+-|+|||+++
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~---------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~ 161 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEAS---------KYP------IHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLV 161 (421)
T ss_dssp SCEEEEEECCCCCCBSCTT---------TCS------BCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCEEEECcCccCccccc---------ccc------cccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEE
Confidence 7899999952222211100 000 001233333332211 1135578988889999999999
Q ss_pred EEecc
Q 018250 212 FSLIT 216 (359)
Q Consensus 212 l~~~g 216 (359)
+.++.
T Consensus 162 ~i~p~ 166 (421)
T 2ih2_A 162 FVVPA 166 (421)
T ss_dssp EEEEG
T ss_pred EEECh
Confidence 99864
No 238
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.76 E-value=0.00072 Score=65.73 Aligned_cols=78 Identities=6% Similarity=-0.130 Sum_probs=50.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRLF 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l~ 135 (359)
..+|+|+|||+|..++.++ ... +..+++..|+........-+++..... -+.-+-+++.+..+
T Consensus 218 ~~~vLD~gCGsG~~~i~~a--------~~~-------~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~ 282 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELA--------LRR-------YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQ 282 (373)
T ss_dssp SCCEEETTCTTCHHHHHHH--------HTT-------CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGG
T ss_pred CCEEEEccCcCcHHHHHHH--------HhC-------CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCc
Confidence 4689999999999988874 221 223799999987666555444321100 11222346766667
Q ss_pred CCCceeEEEecCccc
Q 018250 136 PKSTLHVVNSFNAMH 150 (359)
Q Consensus 136 p~~s~d~~~S~~alH 150 (359)
|++++|+|+++-.++
T Consensus 283 ~~~~fD~Ii~npPyg 297 (373)
T 3tm4_A 283 YVDSVDFAISNLPYG 297 (373)
T ss_dssp TCSCEEEEEEECCCC
T ss_pred ccCCcCEEEECCCCC
Confidence 889999999965544
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.73 E-value=0.00064 Score=68.17 Aligned_cols=123 Identities=11% Similarity=0.028 Sum_probs=70.8
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---Cc-ccccccCccccc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RK-YYAAGVPGSFHG 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~-~~~~~vpgsfy~ 132 (359)
...+|+|+|||+|..|+.+++ ... ..-+|+.+|+.......+-+++.. .. .++. ++...
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~--------~~~------~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~---~Da~~ 167 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAA--------QMK------GKGLLVTNEIFPKRAKILSENIERWGVSNAIVTN---HAPAE 167 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHH--------HHT------TCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEEC---CCHHH
T ss_pred CCCEEEEECCCcCHHHHHHHH--------HcC------CCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEe---CCHHH
Confidence 357999999999999998852 221 135899999987666555444321 11 1222 23221
Q ss_pred CC-CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHH----HHHHHHHHHHHHHHHHHHHhhccC
Q 018250 133 RL-FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHE----TFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 133 ~l-~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~----~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
.. ..++++|.|++ +.|+.-.. .+ ...|+... ............+|..-.+-|+||
T Consensus 168 l~~~~~~~FD~Il~--------DaPCSg~G---------~~---rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG 227 (456)
T 3m4x_A 168 LVPHFSGFFDRIVV--------DAPCSGEG---------MF---RKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK 227 (456)
T ss_dssp HHHHHTTCEEEEEE--------ECCCCCGG---------GT---TTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE
T ss_pred hhhhccccCCEEEE--------CCCCCCcc---------cc---ccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 11 23578999987 23432111 00 01122211 011223334457888888999999
Q ss_pred ceeEEEecc
Q 018250 208 GLMVFSLIT 216 (359)
Q Consensus 208 G~lvl~~~g 216 (359)
|+|+.++..
T Consensus 228 G~LvYsTCs 236 (456)
T 3m4x_A 228 GQLIYSTCT 236 (456)
T ss_dssp EEEEEEESC
T ss_pred cEEEEEEee
Confidence 999987753
No 240
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=96.72 E-value=0.0016 Score=59.88 Aligned_cols=103 Identities=14% Similarity=0.089 Sum_probs=65.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc--cccccCcccccCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY--YAAGVPGSFHGRL 134 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~--~~~~vpgsfy~~l 134 (359)
...+|+|+|||+|..++.++ +. .|...|+..|+-.......-+++..... -+...-|+.++.+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la--------~~-------~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~ 85 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAV--------KN-------QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVI 85 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHH--------HT-------TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC
T ss_pred CCCEEEEECCccHHHHHHHH--------Hh-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhcc
Confidence 34799999999999999885 22 2345899999987776665555421000 1122234555666
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEEEe
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
.|...+|+|++. .. | ..-+..+|....+-|+++|+||++-
T Consensus 86 ~~~~~~D~Ivia-----------gm----------G-------------------g~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 86 EKKDAIDTIVIA-----------GM----------G-------------------GTLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp CGGGCCCEEEEE-----------EE----------C-------------------HHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred CccccccEEEEe-----------CC----------c-------------------hHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 555568888751 00 0 0124457777778889999998875
No 241
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=96.66 E-value=0.0019 Score=59.83 Aligned_cols=34 Identities=6% Similarity=-0.217 Sum_probs=25.2
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTEN 107 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~N 107 (359)
.+.+|+|+|||+|..+..++ + .+ .+++..|+-..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll--------~--------~~-~~v~~veid~~ 105 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLF--------K--------YD-THIDFVQADEK 105 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHT--------T--------SS-CEEEEECSCHH
T ss_pred CCCEEEEEeCCcCHHHHHHH--------h--------CC-CEEEEEECCHH
Confidence 45799999999999887663 1 13 47888888653
No 242
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.65 E-value=0.0031 Score=61.10 Aligned_cols=104 Identities=9% Similarity=-0.022 Sum_probs=65.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcc-cccccCcccccCC--
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKY-YAAGVPGSFHGRL-- 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~-~~~~vpgsfy~~l-- 134 (359)
..+|+|+| |+|..++.+. .. .|..+|+..|+........-+.+..... -+..+.|++.+.+
T Consensus 173 ~~~VLDlG-G~G~~~~~la--------~~-------~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~ 236 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALM--------LS-------GLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPD 236 (373)
T ss_dssp TCEEEEES-CTTCHHHHHH--------HH-------TCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCT
T ss_pred CCEEEEEC-CCCHHHHHHH--------Hh-------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchh
Confidence 47999999 9999998774 22 1345899999976555444333221000 1233345665522
Q ss_pred CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee-EEE
Q 018250 135 FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM-VFS 213 (359)
Q Consensus 135 ~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l-vl~ 213 (359)
.+++++|+|+++..+|+. +...||+.-.+-|+|||++ +++
T Consensus 237 ~~~~~fD~Vi~~~p~~~~---------------------------------------~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 237 YALHKFDTFITDPPETLE---------------------------------------AIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp TTSSCBSEEEECCCSSHH---------------------------------------HHHHHHHHHHHTBCSTTCEEEEE
T ss_pred hccCCccEEEECCCCchH---------------------------------------HHHHHHHHHHHHcccCCeEEEEE
Confidence 134789999997554431 1256888888999999965 666
Q ss_pred ecc
Q 018250 214 LIT 216 (359)
Q Consensus 214 ~~g 216 (359)
+..
T Consensus 278 ~~~ 280 (373)
T 2qm3_A 278 ITR 280 (373)
T ss_dssp ECT
T ss_pred Eec
Confidence 643
No 243
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.58 E-value=0.0036 Score=61.05 Aligned_cols=111 Identities=10% Similarity=0.027 Sum_probs=65.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---C--c-ccccccCcccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---R--K-YYAAGVPGSFH 131 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~--~-~~~~~vpgsfy 131 (359)
..+|+|+|||+|..|+.++. .. .-+|+..|+........-++... . . -|+. ++..
T Consensus 213 ~~~VLDl~cGtG~~sl~la~--------~g--------a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~---~D~~ 273 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAM--------GG--------AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV---MDVF 273 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHH--------TT--------BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE---SCHH
T ss_pred CCeEEEEeeccCHHHHHHHH--------CC--------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE---CCHH
Confidence 36899999999999998852 10 12788999887665554433211 1 1 1333 2333
Q ss_pred cCC--C--CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 132 GRL--F--PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 132 ~~l--~--p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
+-+ + ...++|+|++. |+.... +++. ..+..+++..+++.-.+-|+||
T Consensus 274 ~~l~~~~~~~~~fD~Ii~D---------PP~~~~------~~~~--------------~~~~~~~~~~ll~~~~~~L~pg 324 (385)
T 2b78_A 274 DYFKYARRHHLTYDIIIID---------PPSFAR------NKKE--------------VFSVSKDYHKLIRQGLEILSEN 324 (385)
T ss_dssp HHHHHHHHTTCCEEEEEEC---------CCCC-----------C--------------CCCHHHHHHHHHHHHHHTEEEE
T ss_pred HHHHHHHHhCCCccEEEEC---------CCCCCC------Chhh--------------HHHHHHHHHHHHHHHHHhcCCC
Confidence 211 1 14589999873 221110 0000 0113456777888888999999
Q ss_pred ceeEEEecc
Q 018250 208 GLMVFSLIT 216 (359)
Q Consensus 208 G~lvl~~~g 216 (359)
|+++++...
T Consensus 325 G~l~~~~~~ 333 (385)
T 2b78_A 325 GLIIASTNA 333 (385)
T ss_dssp EEEEEEECC
T ss_pred cEEEEEeCC
Confidence 999988753
No 244
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.51 E-value=0.0034 Score=61.22 Aligned_cols=111 Identities=14% Similarity=0.045 Sum_probs=66.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---C-c-ccccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---R-K-YYAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~-~-~~~~~vpgsfy~ 132 (359)
..+|+|+|||+|..|+.++. . ...+|+..|+.......+-++... . . -|+. ++..+
T Consensus 218 ~~~VLDl~~G~G~~~~~la~--------~--------g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~---~d~~~ 278 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAI--------A--------GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV---GSAFE 278 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHH--------T--------TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHH
T ss_pred CCeEEEecCCCCHHHHHHHH--------C--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEE---CCHHH
Confidence 46899999999999998852 1 123788888876444333322211 1 1 1222 34333
Q ss_pred CCC----CCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 018250 133 RLF----PKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGG 208 (359)
Q Consensus 133 ~l~----p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG 208 (359)
.+. +.+++|+|++. .|..... ... .....+++..+|..-.+-|+|||
T Consensus 279 ~~~~~~~~~~~fD~Vi~d--------pP~~~~~----------------~~~-----~~~~~~~~~~~l~~~~~~LkpgG 329 (396)
T 2as0_A 279 EMEKLQKKGEKFDIVVLD--------PPAFVQH----------------EKD-----LKAGLRAYFNVNFAGLNLVKDGG 329 (396)
T ss_dssp HHHHHHHTTCCEEEEEEC--------CCCSCSS----------------GGG-----HHHHHHHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHhhCCCCCEEEEC--------CCCCCCC----------------HHH-----HHHHHHHHHHHHHHHHHhcCCCc
Confidence 221 25789999973 2221100 011 12345678889999999999999
Q ss_pred eeEEEecc
Q 018250 209 LMVFSLIT 216 (359)
Q Consensus 209 ~lvl~~~g 216 (359)
+|+++...
T Consensus 330 ~lv~~~~~ 337 (396)
T 2as0_A 330 ILVTCSCS 337 (396)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 99888753
No 245
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=96.50 E-value=0.01 Score=55.46 Aligned_cols=70 Identities=7% Similarity=-0.021 Sum_probs=44.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----CcccccccCcccccC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKYYAAGVPGSFHGR 133 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~~~~~vpgsfy~~ 133 (359)
..+|+|+|||+|+.|+.++ ++. ...|+..|+-..-+..+-+++.. ..+ ..+-|+.. .
T Consensus 126 g~~VlD~~aG~G~~~i~~a--------~~g--------~~~V~avD~np~a~~~~~~N~~~N~v~~~v--~~~~~D~~-~ 186 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIA--------VYG--------KAKVIAIEKDPYTFKFLVENIHLNKVEDRM--SAYNMDNR-D 186 (278)
T ss_dssp TCEEEETTCTTTTTTHHHH--------HHT--------CCEEEEECCCHHHHHHHHHHHHHTTCTTTE--EEECSCTT-T
T ss_pred CCEEEEecCcCcHHHHHHH--------Hhc--------CCeEEEEECCHHHHHHHHHHHHHcCCCCcE--EEEeCcHH-H
Confidence 4789999999999999884 221 24899999977666665554421 122 11223432 2
Q ss_pred CCCCCceeEEEec
Q 018250 134 LFPKSTLHVVNSF 146 (359)
Q Consensus 134 l~p~~s~d~~~S~ 146 (359)
+.+.+.+|.|+.+
T Consensus 187 ~~~~~~~D~Vi~~ 199 (278)
T 3k6r_A 187 FPGENIADRILMG 199 (278)
T ss_dssp CCCCSCEEEEEEC
T ss_pred hccccCCCEEEEC
Confidence 3466788988753
No 246
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.44 E-value=0.0019 Score=68.13 Aligned_cols=114 Identities=14% Similarity=0.051 Sum_probs=67.2
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---C--c-ccccccCcccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---R--K-YYAAGVPGSFH 131 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~--~-~~~~~vpgsfy 131 (359)
..+|+|+|||||..|+.++ .. ..-+|+..|+.......+-+++.. . . -|+. ++.+
T Consensus 540 g~~VLDlg~GtG~~sl~aa--------~~--------ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~---~D~~ 600 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAG--------LG--------GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ---ADCL 600 (703)
T ss_dssp TCEEEEESCTTCHHHHHHH--------HT--------TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEE---SCHH
T ss_pred CCcEEEeeechhHHHHHHH--------HC--------CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEe---cCHH
Confidence 3589999999999998774 11 013688899877555444333210 1 1 1222 3433
Q ss_pred cCC-CCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCcee
Q 018250 132 GRL-FPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLM 210 (359)
Q Consensus 132 ~~l-~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~l 210 (359)
+-+ ...+++|+|++. |+...... ....+ .+..+|...+++.-.+-|+|||+|
T Consensus 601 ~~l~~~~~~fD~Ii~D---------PP~f~~~~-------------~~~~~-----~~~~~~~~~ll~~a~~~LkpgG~L 653 (703)
T 3v97_A 601 AWLREANEQFDLIFID---------PPTFSNSK-------------RMEDA-----FDVQRDHLALMKDLKRLLRAGGTI 653 (703)
T ss_dssp HHHHHCCCCEEEEEEC---------CCSBC--------------------C-----CBHHHHHHHHHHHHHHHEEEEEEE
T ss_pred HHHHhcCCCccEEEEC---------CccccCCc-------------cchhH-----HHHHHHHHHHHHHHHHhcCCCcEE
Confidence 322 245789999982 32211100 00000 124467778998889999999999
Q ss_pred EEEeccC
Q 018250 211 VFSLITG 217 (359)
Q Consensus 211 vl~~~g~ 217 (359)
++++..+
T Consensus 654 ~~s~~~~ 660 (703)
T 3v97_A 654 MFSNNKR 660 (703)
T ss_dssp EEEECCT
T ss_pred EEEECCc
Confidence 9888653
No 247
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=96.29 E-value=0.0028 Score=60.66 Aligned_cols=95 Identities=13% Similarity=0.132 Sum_probs=59.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-----CcccccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-----RKYYAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-----~~~~~~~vpgsfy~ 132 (359)
..+|+|+|||+|..|+. +. ...+|+..|+.......+-+++.. +--++. ++..+
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~-----------------~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~---~D~~~ 254 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK-----------------NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPIL---SDVRE 254 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT-----------------TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCGGG
T ss_pred CCEEEEccCccCHHHHh-cc-----------------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---CChHH
Confidence 46899999999999886 51 134899999876555544433211 111233 34444
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
-+ +++|++++. .|.... .|+..-.+-|+|||++++
T Consensus 255 ~~---~~fD~Vi~d--------pP~~~~----------------------------------~~l~~~~~~L~~gG~l~~ 289 (336)
T 2yx1_A 255 VD---VKGNRVIMN--------LPKFAH----------------------------------KFIDKALDIVEEGGVIHY 289 (336)
T ss_dssp CC---CCEEEEEEC--------CTTTGG----------------------------------GGHHHHHHHEEEEEEEEE
T ss_pred hc---CCCcEEEEC--------CcHhHH----------------------------------HHHHHHHHHcCCCCEEEE
Confidence 33 789999873 222110 255566778999999999
Q ss_pred EeccCC
Q 018250 213 SLITGP 218 (359)
Q Consensus 213 ~~~g~~ 218 (359)
......
T Consensus 290 ~~~~~~ 295 (336)
T 2yx1_A 290 YTIGKD 295 (336)
T ss_dssp EEEESS
T ss_pred EEeecC
Confidence 876544
No 248
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=96.22 E-value=0.0014 Score=59.56 Aligned_cols=73 Identities=15% Similarity=-0.018 Sum_probs=42.5
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
...+|+|+|||+|..|..++ ++. .+++..|+.......+-+.+.. .--+.-+-+++.+..+|
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~--------~~~---------~~v~~id~~~~~~~~a~~~~~~-~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLA--------KIS---------KQVTSIELDSHLFNLSSEKLKL-NTRVTLIHQDILQFQFP 90 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHH--------HHS---------SEEEESSSSCSSSSSSSCTTTT-CSEEEECCSCCTTTTCC
T ss_pred CCCEEEEEeCCCCHHHHHHH--------HhC---------CeEEEEECCHHHHHHHHHHhcc-CCceEEEECChhhcCcc
Confidence 45789999999999999885 221 3788888766443221111110 00122234566655566
Q ss_pred C-CceeEEEecCc
Q 018250 137 K-STLHVVNSFNA 148 (359)
Q Consensus 137 ~-~s~d~~~S~~a 148 (359)
+ +++ .++|+--
T Consensus 91 ~~~~f-~vv~n~P 102 (245)
T 1yub_A 91 NKQRY-KIVGNIP 102 (245)
T ss_dssp CSSEE-EEEEECC
T ss_pred cCCCc-EEEEeCC
Confidence 3 677 6777643
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.08 E-value=0.015 Score=54.79 Aligned_cols=78 Identities=10% Similarity=-0.089 Sum_probs=51.7
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-CcccccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~~~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|..|..+++ + ..+|+..|+-......+-+.+.. .. +.-+-|++.+-.+
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~--------~---------~~~V~aVEid~~li~~a~~~~~~~~~--v~vi~gD~l~~~~ 110 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAK--------N---------AKKVYVIEIDKSLEPYANKLKELYNN--IEIIWGDALKVDL 110 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHH--------H---------SSEEEEEESCGGGHHHHHHHHHHCSS--EEEEESCTTTSCG
T ss_pred CcCEEEEECCCchHHHHHHHh--------c---------CCEEEEEECCHHHHHHHHHHhccCCC--eEEEECchhhCCc
Confidence 356899999999999999863 2 13677778776555544433311 11 1122346666567
Q ss_pred CCCceeEEEecCcccccC
Q 018250 136 PKSTLHVVNSFNAMHWLS 153 (359)
Q Consensus 136 p~~s~d~~~S~~alHWLs 153 (359)
|+.++|.++++...||-+
T Consensus 111 ~~~~fD~Iv~NlPy~is~ 128 (295)
T 3gru_A 111 NKLDFNKVVANLPYQISS 128 (295)
T ss_dssp GGSCCSEEEEECCGGGHH
T ss_pred ccCCccEEEEeCcccccH
Confidence 777899999998888843
No 250
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=95.94 E-value=0.017 Score=60.07 Aligned_cols=131 Identities=16% Similarity=0.132 Sum_probs=72.4
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEE
Q 018250 21 AHNSQFQRGTVDAAKELVREAIVNKLDVGSYGYDNSYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVF 100 (359)
Q Consensus 21 ~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~ 100 (359)
-++..+|+++..++++++.+ .. ...+..+|+|+|||+|+.+...++..- +. .-.+.||
T Consensus 332 vKy~~Ye~AI~~Al~d~~~~--------~~---~~~~~~vVldVGaGrGpLv~~al~A~a----~~-------~~~vkVy 389 (637)
T 4gqb_A 332 IKYSQYQQAIYKCLLDRVPE--------EE---KDTNVQVLMVLGAGRGPLVNASLRAAK----QA-------DRRIKLY 389 (637)
T ss_dssp HHHHHHHHHHHHHHHHHSCG--------GG---TTTCEEEEEEESCTTSHHHHHHHHHHH----HT-------TCEEEEE
T ss_pred hhHHHHHHHHHHHHHHhhhh--------cc---ccCCCcEEEEECCCCcHHHHHHHHHHH----hc-------CCCcEEE
Confidence 46667777766555544321 11 024567899999999999776654322 11 1235778
Q ss_pred ecCCCCCchHHHHHhCCC--CcccccccCcccccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCC
Q 018250 101 FNDHTENDFNTLFRTLPP--RKYYAAGVPGSFHGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFM 178 (359)
Q Consensus 101 ~nDLp~NDFn~lf~~l~~--~~~~~~~vpgsfy~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~ 178 (359)
..+-..|-.-++- .+.. -.--+.-|-|+..+--+| ..+|+++| -||-.. ..|.+ .
T Consensus 390 AVEknp~A~~a~~-~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVS----EwMG~f----------Ll~E~-------m 446 (637)
T 4gqb_A 390 AVEKNPNAVVTLE-NWQFEEWGSQVTVVSSDMREWVAP-EKADIIVS----ELLGSF----------ADNEL-------S 446 (637)
T ss_dssp EEESCHHHHHHHH-HHHHHTTGGGEEEEESCTTTCCCS-SCEEEEEC----CCCBTT----------BGGGC-------H
T ss_pred EEECCHHHHHHHH-HHHhccCCCeEEEEeCcceeccCC-cccCEEEE----EcCccc----------ccccC-------C
Confidence 8776443322211 1111 111133344566333344 78999999 565321 11221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCceeE
Q 018250 179 KGVHETFQAQFRSDFESILNARAEELVPGGLMV 211 (359)
Q Consensus 179 ~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lv 211 (359)
+ ..|.+|-+=|||||+|+
T Consensus 447 l---------------evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 447 P---------------ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp H---------------HHHHHHGGGEEEEEEEE
T ss_pred H---------------HHHHHHHHhcCCCcEEc
Confidence 2 24668889999999974
No 251
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=95.91 E-value=0.053 Score=50.57 Aligned_cols=51 Identities=10% Similarity=0.042 Sum_probs=34.2
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhccC-cee
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRS-DFESILNARAEELVPG-GLM 210 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~-D~~~fL~~Ra~EL~pG-G~l 210 (359)
+.++++.+|+|+|..+.+ |-.+ +.+++.. ++ |+.-.+-|+|| |.|
T Consensus 134 ~~l~~~~~DlVlsD~apn--sG~~----------------------------~~D~~rs~~L---L~~a~~~LkpG~G~F 180 (277)
T 3evf_A 134 HRLEPVKCDTLLCDIGES--SSSS----------------------------VTEGERTVRV---LDTVEKWLACGVDNF 180 (277)
T ss_dssp TTSCCCCCSEEEECCCCC--CSCH----------------------------HHHHHHHHHH---HHHHHHHHTTCCSEE
T ss_pred hhcCCCCccEEEecCccC--cCch----------------------------HHHHHHHHHH---HHHHHHHhCCCCCeE
Confidence 347788999999988776 2211 1122211 22 66677889999 999
Q ss_pred EEEecc
Q 018250 211 VFSLIT 216 (359)
Q Consensus 211 vl~~~g 216 (359)
|+-.+-
T Consensus 181 V~KVf~ 186 (277)
T 3evf_A 181 CVKVLA 186 (277)
T ss_dssp EEEESC
T ss_pred EEEecC
Confidence 998874
No 252
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=95.91 E-value=0.0043 Score=58.37 Aligned_cols=76 Identities=12% Similarity=0.036 Sum_probs=47.0
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC--C-CcccccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP--P-RKYYAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~--~-~~~~~~~vpgsfy~~ 133 (359)
...+|+|+|||+|..|..+++ + ..+|+..|+.......+-+... . .. +.-+.|++..-
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~--------~---------~~~v~~vDi~~~~~~~a~~~~~~~~~~~--v~~~~~D~~~~ 102 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLP--------L---------AKKVITIDIDSRMISEVKKRCLYEGYNN--LEVYEGDAIKT 102 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTT--------T---------SSEEEEECSCHHHHHHHHHHHHHTTCCC--EEC----CCSS
T ss_pred CcCEEEEEcCcCcHHHHHHHh--------c---------CCEEEEEECCHHHHHHHHHHHHHcCCCc--eEEEECchhhC
Confidence 356899999999999998841 1 2478888887655444333221 0 11 11223455443
Q ss_pred CCCCCceeEEEecCcccccC
Q 018250 134 LFPKSTLHVVNSFNAMHWLS 153 (359)
Q Consensus 134 l~p~~s~d~~~S~~alHWLs 153 (359)
|..++|+++++...||.+
T Consensus 103 --~~~~~D~Vv~n~py~~~~ 120 (299)
T 2h1r_A 103 --VFPKFDVCTANIPYKISS 120 (299)
T ss_dssp --CCCCCSEEEEECCGGGHH
T ss_pred --CcccCCEEEEcCCccccc
Confidence 334899999999988854
No 253
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.87 E-value=0.0076 Score=55.57 Aligned_cols=21 Identities=19% Similarity=0.137 Sum_probs=18.2
Q ss_pred cceEEEeecCCCCcccHHHHH
Q 018250 57 YTVRIADLGCSVGPNTFISVQ 77 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~ 77 (359)
...+|+|+|||+|..|..+++
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~ 49 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLT 49 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTT
T ss_pred CcCEEEEEcccccHHHHHHHH
Confidence 356899999999999999864
No 254
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.82 E-value=0.004 Score=60.80 Aligned_cols=110 Identities=12% Similarity=0.058 Sum_probs=63.1
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC-----C-CcccccccCcccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP-----P-RKYYAAGVPGSFH 131 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~-----~-~~~~~~~vpgsfy 131 (359)
..+|+|+|||+|..|+.++. .. ..+|+..|+.......+-++.. . +--|+. ++..
T Consensus 221 ~~~VLDl~cG~G~~sl~la~--------~g--------~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~---~D~~ 281 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALM--------GG--------CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVR---DDVF 281 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHH--------TT--------CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE---SCHH
T ss_pred CCeEEEeeccCCHHHHHHHH--------CC--------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE---CCHH
Confidence 35899999999999998852 10 1378888887644433332221 0 111222 3433
Q ss_pred cCCC--C--CCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 132 GRLF--P--KSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 132 ~~l~--p--~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
+.+. + ..++|+|++. .|..... ++.+ ....+++..++..-.+.|+||
T Consensus 282 ~~~~~~~~~~~~fD~Ii~d--------pP~~~~~-------~~~~--------------~~~~~~~~~~l~~~~~~Lkpg 332 (396)
T 3c0k_A 282 KLLRTYRDRGEKFDVIVMD--------PPKFVEN-------KSQL--------------MGACRGYKDINMLAIQLLNEG 332 (396)
T ss_dssp HHHHHHHHTTCCEEEEEEC--------CSSTTTC-------SSSS--------------SCCCTHHHHHHHHHHHTEEEE
T ss_pred HHHHHHHhcCCCCCEEEEC--------CCCCCCC-------hhHH--------------HHHHHHHHHHHHHHHHhcCCC
Confidence 3221 1 4689999983 2221110 0000 001246667888888999999
Q ss_pred ceeEEEec
Q 018250 208 GLMVFSLI 215 (359)
Q Consensus 208 G~lvl~~~ 215 (359)
|+++++..
T Consensus 333 G~l~~~~~ 340 (396)
T 3c0k_A 333 GILLTFSC 340 (396)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEeC
Confidence 99998874
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=95.78 E-value=0.022 Score=56.49 Aligned_cols=132 Identities=11% Similarity=-0.052 Sum_probs=65.7
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCC--CCCCCceEEecCCCCCchHHHHHhCCCCcc---cccccCccccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLS--LPVPDFQVFFNDHTENDFNTLFRTLPPRKY---YAAGVPGSFHG 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~--~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~---~~~~vpgsfy~ 132 (359)
..+|+|.|||||...+.+...+.+ ...... ...+..+++..|+-.......-..+.-... -+.-+.|++..
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~----~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~ 247 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKG----QSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLE 247 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHT----CC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTT
T ss_pred CCEEeccCCCcchHHHHHHHHHHH----hcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCC
Confidence 468999999999998877644321 000000 000124788888865444332221110000 01111234433
Q ss_pred CCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCceeEE
Q 018250 133 RLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELVPGGLMVF 212 (359)
Q Consensus 133 ~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl 212 (359)
... ...+|+|+++--++-....... +.+.......+. .-..||..-.+-|+|||++++
T Consensus 248 ~~~-~~~fD~Iv~NPPf~~~~~~~~~--------~~~~~~~~~~~~-------------~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 248 KEP-STLVDVILANPPFGTRPAGSVD--------INRPDFYVETKN-------------NQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp SCC-SSCEEEEEECCCSSCCCTTCCC--------CCCTTSSSCCSC-------------HHHHHHHHHHHHEEEEEEEEE
T ss_pred Ccc-cCCcCEEEECCCCCCcccccch--------hhHhhcCCCCcc-------------hHHHHHHHHHHHhccCCEEEE
Confidence 332 3489999998444321111110 111111111111 123578888889999999999
Q ss_pred Eec
Q 018250 213 SLI 215 (359)
Q Consensus 213 ~~~ 215 (359)
.++
T Consensus 306 V~p 308 (445)
T 2okc_A 306 VLP 308 (445)
T ss_dssp EEE
T ss_pred EEC
Confidence 985
No 256
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=95.58 E-value=0.073 Score=54.31 Aligned_cols=142 Identities=14% Similarity=0.106 Sum_probs=69.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC--CC-CcccccccCcc-cccC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL--PP-RKYYAAGVPGS-FHGR 133 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l--~~-~~~~~~~vpgs-fy~~ 133 (359)
..+|+|.+||||...+.++..+.+.-.+............+++..|+-.......-.++ .. ..- +.-+.|+ +...
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~-i~i~~gDtL~~~ 323 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFN-FGKKNADSFLDD 323 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCB-CCSSSCCTTTSC
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcc-cceeccchhcCc
Confidence 35999999999988777765543321111000000001358899888654433322221 11 100 1112344 3344
Q ss_pred CCCCCceeEEEecCcc---cccCCCCcccccccccccCCCc---eeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 018250 134 LFPKSTLHVVNSFNAM---HWLSKTPKVNMLEKSLEWNQGS---IKCTRFMKGVHETFQAQFRSDFESILNARAEELVPG 207 (359)
Q Consensus 134 l~p~~s~d~~~S~~al---HWLs~~p~~~~~~~~~~~n~g~---i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~pG 207 (359)
.+++..+|+|+++=-+ .|-.. .+.+. +-|.-|. ... ..++.- ..|+ .|+.+-.+-|+||
T Consensus 324 ~~~~~~fD~Iv~NPPf~~~~~~~~---~~~~d--~r~~~g~~~~~~~-~~~~~~--------~~~~-~Fl~~~l~~Lk~g 388 (544)
T 3khk_A 324 QHPDLRADFVMTNPPFNMKDWWHE---KLADD--PRWTINTNGEKRI-LTPPTG--------NANF-AWMLHMLYHLAPT 388 (544)
T ss_dssp SCTTCCEEEEEECCCSSCCSCCCG---GGTTC--GGGEECCC--CEE-CCCCTT--------CTHH-HHHHHHHHTEEEE
T ss_pred ccccccccEEEECCCcCCccccch---hhhhh--hhhhcCccccccc-ccCCCc--------chhH-HHHHHHHHHhccC
Confidence 5678899999996322 25221 11100 0010010 000 011111 1122 4888889999999
Q ss_pred ceeEEEec
Q 018250 208 GLMVFSLI 215 (359)
Q Consensus 208 G~lvl~~~ 215 (359)
|++++.++
T Consensus 389 Gr~aiVlP 396 (544)
T 3khk_A 389 GSMALLLA 396 (544)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEec
Confidence 99999985
No 257
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=95.44 E-value=0.0039 Score=63.91 Aligned_cols=79 Identities=14% Similarity=0.242 Sum_probs=51.7
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC---CC-CcccccccCcccc
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL---PP-RKYYAAGVPGSFH 131 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l---~~-~~~~~~~vpgsfy 131 (359)
..+.||||+|||.|..|..++ +. ..+|+.-|+....-...-..- +. .--|..+ +..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la--------~~---------ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~---~~~ 124 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLA--------SK---------GATIVGIDFQQENINVCRALAEENPDFAAEFRVG---RIE 124 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHH--------HT---------TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEEC---CHH
T ss_pred CCCCeEEEECCCCcHHHHHHH--------hC---------CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEEC---CHH
Confidence 346899999999999998884 22 358999999876544322111 11 1113332 332
Q ss_pred cC--CCCCCceeEEEecCcccccCC
Q 018250 132 GR--LFPKSTLHVVNSFNAMHWLSK 154 (359)
Q Consensus 132 ~~--l~p~~s~d~~~S~~alHWLs~ 154 (359)
+. .++++++|+|+|.-.||++.+
T Consensus 125 ~~~~~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 125 EVIAALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp HHHHHCCTTSCSEEEEESCHHHHHH
T ss_pred HHhhhccCCCccEEEECcchhcCCC
Confidence 22 256789999999999999653
No 258
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=95.32 E-value=0.0095 Score=54.22 Aligned_cols=75 Identities=16% Similarity=0.020 Sum_probs=47.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-CcccccccCcccccCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RKYYAAGVPGSFHGRLF 135 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~~~~~~vpgsfy~~l~ 135 (359)
...+|+|+|||+|..|..+++ +. .+|+..|+.......+-+.+.. .. +.-+-|++.+-.+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~--------~~---------~~v~~vD~~~~~~~~a~~~~~~~~~--v~~~~~D~~~~~~ 90 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQ--------RC---------NFVTAIEIDHKLCKTTENKLVDHDN--FQVLNKDILQFKF 90 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHH--------HS---------SEEEEECSCHHHHHHHHHHTTTCCS--EEEECCCGGGCCC
T ss_pred CCCEEEEEeCCchHHHHHHHH--------cC---------CeEEEEECCHHHHHHHHHhhccCCC--eEEEEChHHhCCc
Confidence 356899999999999998852 21 3788888876555554444432 11 1223356666556
Q ss_pred CC-CceeEEEecCcccc
Q 018250 136 PK-STLHVVNSFNAMHW 151 (359)
Q Consensus 136 p~-~s~d~~~S~~alHW 151 (359)
|+ .++ .++|+...+|
T Consensus 91 ~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 91 PKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp CSSCCC-EEEEECCGGG
T ss_pred ccCCCe-EEEEeCCccc
Confidence 64 345 5777766665
No 259
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=95.16 E-value=0.026 Score=59.19 Aligned_cols=110 Identities=16% Similarity=0.065 Sum_probs=57.3
Q ss_pred hHHhhHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceE
Q 018250 20 YAHNSQFQRGTVDAAKELVREAIVNKLDVGSYGYDNSYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQV 99 (359)
Q Consensus 20 Y~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v 99 (359)
..++..+|+.+..+++++..+ ..+...|+|+|||+|+.+...+...-.+ ..+++.. .....+.|
T Consensus 386 ~vRy~~Y~~AI~~al~d~~~~--------------~~~~~VVldVGaGtGpLs~~al~A~~~a-~~~~~~~-~~~~~~kV 449 (745)
T 3ua3_A 386 QIKYDVYGEAVVGALKDLGAD--------------GRKTVVIYLLGGGRGPIGTKILKSEREY-NNTFRQG-QESLKVKL 449 (745)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--------------CCSEEEEEEESCTTCHHHHHHHHHHHHH-HHHHSTT-SCCCEEEE
T ss_pred hhhHHHHHHHHHHHHHHhhcc--------------cCCCcEEEEECCCCCHHHHHHHHHHHHh-Ccccccc-ccccccEE
Confidence 345566666665554444311 1346789999999999987665433211 1111110 11234688
Q ss_pred EecCCCCCchHHHHHhCCC-CcccccccCcccccCCCC-----CCceeEEEe
Q 018250 100 FFNDHTENDFNTLFRTLPP-RKYYAAGVPGSFHGRLFP-----KSTLHVVNS 145 (359)
Q Consensus 100 ~~nDLp~NDFn~lf~~l~~-~~~~~~~vpgsfy~~l~p-----~~s~d~~~S 145 (359)
|..+--.|-.-++-+...+ -.--+.-|.|...+--+| +..+|+++|
T Consensus 450 yAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVS 501 (745)
T 3ua3_A 450 YIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVS 501 (745)
T ss_dssp EEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEE
T ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEE
Confidence 8888855444443322211 000122233444333344 688999999
No 260
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=94.96 E-value=0.065 Score=52.96 Aligned_cols=69 Identities=19% Similarity=0.053 Sum_probs=40.5
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPK 137 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~ 137 (359)
..+|+|+|||+|..|+.++. . ..+|+..|+........-++......-+.-+.++..+ +++.
T Consensus 291 ~~~VLDlgcG~G~~sl~la~--------~---------~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~-~~~~ 352 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAK--------R---------GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDRE-VSVK 352 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHH--------T---------TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTT-CCCT
T ss_pred CCEEEEeeccchHHHHHHHH--------c---------CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHH-cCcc
Confidence 46899999999999998852 1 1378888887655443333221100002222235433 3343
Q ss_pred CceeEEEe
Q 018250 138 STLHVVNS 145 (359)
Q Consensus 138 ~s~d~~~S 145 (359)
++|++++
T Consensus 353 -~fD~Vv~ 359 (425)
T 2jjq_A 353 -GFDTVIV 359 (425)
T ss_dssp -TCSEEEE
T ss_pred -CCCEEEE
Confidence 8999988
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=94.94 E-value=0.016 Score=56.34 Aligned_cols=21 Identities=19% Similarity=-0.056 Sum_probs=18.0
Q ss_pred CcceEEEeecCCCCcccHHHH
Q 018250 56 SYTVRIADLGCSVGPNTFISV 76 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~ 76 (359)
+.+.+|||+|||+|..+..++
T Consensus 187 p~pkrVL~IGgG~G~~arell 207 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIV 207 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHH
Confidence 467899999999999887764
No 262
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=94.64 E-value=0.082 Score=51.46 Aligned_cols=89 Identities=11% Similarity=-0.019 Sum_probs=49.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHH-----------------------HHHHHHhhcCCCCCCCceEEecCCCCCchHHHH
Q 018250 57 YTVRIADLGCSVGPNTFISVQNII-----------------------EALEFKFQNLSLPVPDFQVFFNDHTENDFNTLF 113 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii-----------------------~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf 113 (359)
...+|+|.|||||..++.++.... +.+++.........++.+|+..|+-.......-
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 357899999999999888764321 112221111111234568999999776655443
Q ss_pred HhCCCC--cccccccCcccccCCCCCCceeEEEec
Q 018250 114 RTLPPR--KYYAAGVPGSFHGRLFPKSTLHVVNSF 146 (359)
Q Consensus 114 ~~l~~~--~~~~~~vpgsfy~~l~p~~s~d~~~S~ 146 (359)
.++... .-.+.-.-+++.+.. ++.++|+|+|+
T Consensus 275 ~Na~~~gl~~~i~~~~~D~~~l~-~~~~~D~Iv~N 308 (385)
T 3ldu_A 275 ENAEIAGVDEYIEFNVGDATQFK-SEDEFGFIITN 308 (385)
T ss_dssp HHHHHHTCGGGEEEEECCGGGCC-CSCBSCEEEEC
T ss_pred HHHHHcCCCCceEEEECChhhcC-cCCCCcEEEEC
Confidence 333210 001222234665543 44689999984
No 263
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=94.50 E-value=0.31 Score=52.02 Aligned_cols=124 Identities=15% Similarity=-0.031 Sum_probs=69.9
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHH--HHhCCC----Ccc-cccccCcc
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTL--FRTLPP----RKY-YAAGVPGS 129 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~l--f~~l~~----~~~-~~~~vpgs 129 (359)
...+|+|.|||||...+.++ +..+. ....+++..|+-....... -..+.. ... ......++
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA--------~~l~e----i~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD 388 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVS--------AGFNN----VMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGED 388 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHH--------HTSTT----CCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCC
T ss_pred CCCEEEECCCCccHHHHHHH--------HHhcc----cCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecc
Confidence 45799999999999887764 22211 1236899999877554433 112211 000 00111344
Q ss_pred cccC-CCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHH--------------HHH
Q 018250 130 FHGR-LFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRS--------------DFE 194 (359)
Q Consensus 130 fy~~-l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~--------------D~~ 194 (359)
|... ..+...+|+|+++ |+-... ...+...+.|...+.. -..
T Consensus 389 ~L~~~~~~~~kFDVVIgN---------PPYg~~--------------~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~ 445 (878)
T 3s1s_A 389 VCSLNPEDFANVSVVVMN---------PPYVSG--------------VTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEA 445 (878)
T ss_dssp GGGCCGGGGTTEEEEEEC---------CBCCSS--------------CCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHH
T ss_pred hhcccccccCCCCEEEEC---------CCcccc--------------ccchhhhhhHHHHhhhhccccccccccccchHH
Confidence 5432 2456789999993 443211 0112222222221111 255
Q ss_pred HHHHHHHHhhccCceeEEEec
Q 018250 195 SILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 195 ~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
.|+..-.+-|+|||++++.++
T Consensus 446 aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 446 LFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp HHHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEEC
Confidence 689988999999999999996
No 264
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=94.37 E-value=0.063 Score=54.80 Aligned_cols=130 Identities=11% Similarity=0.032 Sum_probs=69.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCC--CCcc-cccccCcccccC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLP--PRKY-YAAGVPGSFHGR 133 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~--~~~~-~~~~vpgsfy~~ 133 (359)
...+|+|.+||||...+.+++.+ +. ....+++..|+-...+.-.-.++- .-.+ -+.-..|++...
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l--------~~----~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~ 288 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYS--------RQ----PQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDE 288 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHC--------SC----TTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTS
T ss_pred CCCEEeecccchhHHHHHHHHHH--------Hh----ccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecc
Confidence 46799999999999888775321 11 124688999886644433222210 0000 001112344443
Q ss_pred ---CCCCCceeEEEec--CcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc-cC
Q 018250 134 ---LFPKSTLHVVNSF--NAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELV-PG 207 (359)
Q Consensus 134 ---l~p~~s~d~~~S~--~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~-pG 207 (359)
.++...+|+|+++ |...|-.. .....+.....| |. .++. ...|+ .|+.+-.+-|+ ||
T Consensus 289 d~p~~~~~~fD~IvaNPPf~~~~~~~-~~~~~d~rf~~~--G~-----~~~~--------s~~~~-~Fl~~~l~~Lk~~g 351 (542)
T 3lkd_A 289 DWPTQEPTNFDGVLMNPPYSAKWSAS-SGFMDDPRFSPF--GK-----LAPK--------SKADF-AFLLHGYYHLKQDN 351 (542)
T ss_dssp CSCCSSCCCBSEEEECCCTTCCCCCC-GGGGGSTTTGGG--SS-----CCCT--------TCCHH-HHHHHHHHTBCTTT
T ss_pred cccccccccccEEEecCCcCCccccc-hhhhhhhhhhhh--hh-----cCCC--------chhhH-HHHHHHHHHhCCCc
Confidence 2567899999997 44455211 000111000000 10 0110 01133 48888889999 99
Q ss_pred ceeEEEec
Q 018250 208 GLMVFSLI 215 (359)
Q Consensus 208 G~lvl~~~ 215 (359)
|++++.++
T Consensus 352 Gr~a~VlP 359 (542)
T 3lkd_A 352 GVMAIVLP 359 (542)
T ss_dssp CEEEEEEE
T ss_pred eeEEEEec
Confidence 99999986
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=94.37 E-value=0.068 Score=49.64 Aligned_cols=73 Identities=12% Similarity=-0.063 Sum_probs=45.2
Q ss_pred EEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCCCC-
Q 018250 60 RIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFPKS- 138 (359)
Q Consensus 60 ~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p~~- 138 (359)
+|+|+|||+|..|..+++ + ..+|+..|+-......+-+.++... +.-+-|++++--+++.
T Consensus 49 ~VLEIG~G~G~lt~~L~~--------~---------~~~V~avEid~~~~~~l~~~~~~~~--v~vi~~D~l~~~~~~~~ 109 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLE--------A---------GAEVTAIEKDLRLRPVLEETLSGLP--VRLVFQDALLYPWEEVP 109 (271)
T ss_dssp CEEEECCTTSHHHHHHHH--------T---------TCCEEEEESCGGGHHHHHHHTTTSS--EEEEESCGGGSCGGGSC
T ss_pred eEEEEeCchHHHHHHHHH--------c---------CCEEEEEECCHHHHHHHHHhcCCCC--EEEEECChhhCChhhcc
Confidence 999999999999998852 2 1367888887766555544444211 1222346655545432
Q ss_pred ceeEEEecCcccc
Q 018250 139 TLHVVNSFNAMHW 151 (359)
Q Consensus 139 s~d~~~S~~alHW 151 (359)
..|.+++|.-.+.
T Consensus 110 ~~~~iv~NlPy~i 122 (271)
T 3fut_A 110 QGSLLVANLPYHI 122 (271)
T ss_dssp TTEEEEEEECSSC
T ss_pred CccEEEecCcccc
Confidence 5677777654443
No 266
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=94.30 E-value=0.11 Score=48.56 Aligned_cols=104 Identities=13% Similarity=0.047 Sum_probs=57.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCc------ccccccCcccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRK------YYAAGVPGSFH 131 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~------~~~~~vpgsfy 131 (359)
..+|+|||||.|..|..++. + .+...++-.|+-.+. ....++-.. ++..++ +.
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~--------~-------~gv~sV~GvdvG~d~---~~~pi~~~~~g~~ii~~~~~~--dv- 149 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAAS--------L-------KNVKKVMAFTLGVQG---HEKPIMRTTLGWNLIRFKDKT--DV- 149 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHT--------S-------TTEEEEEEECCCCTT---SCCCCCCCBTTGGGEEEECSC--CG-
T ss_pred CCEEEEeCCCCCHHHHHHHH--------h-------cCCCeeeeEEeccCc---cccccccccCCCceEEeeCCc--ch-
Confidence 45899999999999987641 1 122345556665431 000011000 011111 22
Q ss_pred cCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhccC--c
Q 018250 132 GRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRS-DFESILNARAEELVPG--G 208 (359)
Q Consensus 132 ~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~-D~~~fL~~Ra~EL~pG--G 208 (359)
.-+++..+|+|.|-.|.+ |-.+ +.+|+.. ++ |..-.+-|+|| |
T Consensus 150 -~~l~~~~~DvVLSDmApn--sG~~----------------------------~~D~~rs~~L---L~~A~~~Lk~g~~G 195 (282)
T 3gcz_A 150 -FNMEVIPGDTLLCDIGES--SPSI----------------------------AVEEQRTLRV---LNCAKQWLQEGNYT 195 (282)
T ss_dssp -GGSCCCCCSEEEECCCCC--CSCH----------------------------HHHHHHHHHH---HHHHHHHHHHHCCC
T ss_pred -hhcCCCCcCEEEecCccC--CCCh----------------------------HHHHHHHHHH---HHHHHHHcCCCCCC
Confidence 135778899999876655 2111 1222221 23 66667889999 9
Q ss_pred eeEEEecc
Q 018250 209 LMVFSLIT 216 (359)
Q Consensus 209 ~lvl~~~g 216 (359)
.||+=.+-
T Consensus 196 ~Fv~KvF~ 203 (282)
T 3gcz_A 196 EFCIKVLC 203 (282)
T ss_dssp EEEEEESC
T ss_pred cEEEEEec
Confidence 99998874
No 267
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=94.25 E-value=0.13 Score=50.71 Aligned_cols=68 Identities=13% Similarity=0.058 Sum_probs=41.4
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC----CcccccccCccccc-
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP----RKYYAAGVPGSFHG- 132 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~----~~~~~~~vpgsfy~- 132 (359)
..+|+|+|||+|..|+.++.. ..+|+..|.........-++... +--|..+ +..+
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~-----------------~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~---d~~~~ 346 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQ-----------------AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHE---NLEED 346 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTT-----------------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC---CTTSC
T ss_pred CCEEEECCCCCCHHHHHHHhh-----------------CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEEC---CHHHH
Confidence 468999999999999988521 23677777765444333222210 1123332 3333
Q ss_pred ---CCCCCCceeEEEe
Q 018250 133 ---RLFPKSTLHVVNS 145 (359)
Q Consensus 133 ---~l~p~~s~d~~~S 145 (359)
..++++++|++++
T Consensus 347 l~~~~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 347 VTKQPWAKNGFDKVLL 362 (433)
T ss_dssp CSSSGGGTTCCSEEEE
T ss_pred hhhhhhhcCCCCEEEE
Confidence 2256789999998
No 268
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=94.25 E-value=0.059 Score=52.59 Aligned_cols=88 Identities=7% Similarity=-0.125 Sum_probs=48.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHH-----------------------HHHHHhhcCCCCCCCceEEecCCCCCchHHHHH
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIE-----------------------ALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFR 114 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~-----------------------~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~ 114 (359)
...|+|.+||||...+..+....+ .+++.........++.+++..|.-.......-+
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 478999999999988877643221 122211111112344679999987766555444
Q ss_pred hCCCC--cccccccCcccccCCCCCCceeEEEec
Q 018250 115 TLPPR--KYYAAGVPGSFHGRLFPKSTLHVVNSF 146 (359)
Q Consensus 115 ~l~~~--~~~~~~vpgsfy~~l~p~~s~d~~~S~ 146 (359)
++... .-.+.-+-+++.+... +.++|+|+|+
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~~-~~~fD~Iv~N 307 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFKT-NKINGVLISN 307 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCCC-CCCSCEEEEC
T ss_pred HHHHcCCCCceEEEECChHHCCc-cCCcCEEEEC
Confidence 33210 0011122246655444 4589999984
No 269
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=94.14 E-value=0.071 Score=52.12 Aligned_cols=89 Identities=8% Similarity=-0.129 Sum_probs=49.1
Q ss_pred cceEEEeecCCCCcccHHHHHHHH-----------------------HHHHHHhhcCCCCCCCceEEecCCCCCchHHHH
Q 018250 57 YTVRIADLGCSVGPNTFISVQNII-----------------------EALEFKFQNLSLPVPDFQVFFNDHTENDFNTLF 113 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii-----------------------~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf 113 (359)
...+|+|.|||||...+..+.... +.+++.........++.+++..|+-.......-
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 347899999999998887764322 112221111111234568999998876655544
Q ss_pred HhCCCC--cccccccCcccccCCCCCCceeEEEec
Q 018250 114 RTLPPR--KYYAAGVPGSFHGRLFPKSTLHVVNSF 146 (359)
Q Consensus 114 ~~l~~~--~~~~~~vpgsfy~~l~p~~s~d~~~S~ 146 (359)
.++... .-.+.-+-+++.+... +.++|+|+|+
T Consensus 281 ~Na~~~gl~~~I~~~~~D~~~~~~-~~~fD~Iv~N 314 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVAN 314 (393)
T ss_dssp HHHHHTTCTTCSEEEECCGGGCCC-CCCSCEEEEC
T ss_pred HHHHHcCCCCceEEEECChHhCCC-CCCCCEEEEC
Confidence 433210 0011122246655444 4589999984
No 270
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=93.91 E-value=0.024 Score=55.19 Aligned_cols=43 Identities=19% Similarity=0.274 Sum_probs=30.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHh
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRT 115 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~ 115 (359)
..+|+|+|||+|..++.++ ++. +...|+.+|+-..-...+-++
T Consensus 48 ~~~VLDl~aGtG~~~l~~a--------~~~-------~~~~V~avDi~~~av~~a~~N 90 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFA--------LET-------PAEEVWLNDISEDAYELMKRN 90 (378)
T ss_dssp CSEEEESSCTTSHHHHHHH--------HHS-------SCSEEEEEESCHHHHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHH--------HhC-------CCCeEEEEECCHHHHHHHHHH
Confidence 3689999999999999885 221 235799999876555444433
No 271
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=93.32 E-value=0.17 Score=47.68 Aligned_cols=72 Identities=11% Similarity=0.051 Sum_probs=44.6
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC---CcccccccCcccccCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP---RKYYAAGVPGSFHGRL 134 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~---~~~~~~~vpgsfy~~l 134 (359)
..+|+|+|||+|.-|+.+++ ... +.-+|+.+|+-......+-+++.. .. +..+-+++.+..
T Consensus 103 g~~VLDlcaG~G~kt~~la~--------~~~------~~g~V~a~D~~~~~l~~~~~n~~r~g~~~--v~~~~~D~~~~~ 166 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAA--------LLK------NQGKIFAFDLDAKRLASMATLLARAGVSC--CELAEEDFLAVS 166 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHH--------HHT------TCSEEEEEESCHHHHHHHHHHHHHTTCCS--EEEEECCGGGSC
T ss_pred CCEEEEeCCChhHHHHHHHH--------HhC------CCCEEEEEeCCHHHHHHHHHHHHHcCCCe--EEEEeCChHhcC
Confidence 46899999999999998853 221 235899999987766666554421 11 112223443322
Q ss_pred CCC---CceeEEEe
Q 018250 135 FPK---STLHVVNS 145 (359)
Q Consensus 135 ~p~---~s~d~~~S 145 (359)
... .++|.|+.
T Consensus 167 ~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 167 PSDPRYHEVHYILL 180 (309)
T ss_dssp TTCGGGTTEEEEEE
T ss_pred ccccccCCCCEEEE
Confidence 211 57899987
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=92.54 E-value=0.2 Score=51.02 Aligned_cols=21 Identities=24% Similarity=0.357 Sum_probs=18.5
Q ss_pred HHHHHHHHhhccCceeEEEec
Q 018250 195 SILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 195 ~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
.|+..-.+-|+|||++++.++
T Consensus 293 ~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 293 CFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEec
Confidence 578888889999999999985
No 273
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=91.54 E-value=0.25 Score=48.28 Aligned_cols=45 Identities=13% Similarity=0.126 Sum_probs=31.3
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL 116 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l 116 (359)
..+|+|++||+|..++.+++ +.+ ...+|+.+|+-..-...+-+++
T Consensus 53 g~~VLDlfaGtG~~sl~aa~--------~~~------ga~~V~avDi~~~av~~~~~N~ 97 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLL--------ETS------CVEKAYANDISSKAIEIMKENF 97 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHH--------HCS------CEEEEEEECSCHHHHHHHHHHH
T ss_pred CCEEEECCCcccHHHHHHHH--------hCC------CCCEEEEEECCHHHHHHHHHHH
Confidence 47899999999999998852 211 0147888998765555554443
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=91.42 E-value=0.02 Score=52.41 Aligned_cols=40 Identities=15% Similarity=0.211 Sum_probs=28.4
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHH
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTL 112 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~l 112 (359)
...+|+|+|||+|..|..+++ + +..+|+.-|+-......+
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~--------~--------~~~~v~avEid~~~~~~~ 70 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQ--------H--------PLKKLYVIELDREMVENL 70 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTT--------S--------CCSEEEEECCCHHHHHHH
T ss_pred CcCEEEEEcCchHHHHHHHHH--------c--------CCCeEEEEECCHHHHHHH
Confidence 356899999999999998841 1 135788888876444433
No 275
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=91.36 E-value=0.2 Score=45.75 Aligned_cols=78 Identities=13% Similarity=-0.107 Sum_probs=42.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC-CcccccccCcccccCCCC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP-RKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~-~~~~~~~vpgsfy~~l~p 136 (359)
..+|+|+|||+|..|. +. +. +..+|+..|+-......+-+.+.. .. +.-+-|++..--+|
T Consensus 22 ~~~VLEIG~G~G~lt~-l~---------~~-------~~~~v~avEid~~~~~~a~~~~~~~~~--v~~i~~D~~~~~~~ 82 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PV---------GE-------RLDQLTVIELDRDLAARLQTHPFLGPK--LTIYQQDAMTFNFG 82 (252)
T ss_dssp TCCEEEECCTTTTTHH-HH---------HT-------TCSCEEEECCCHHHHHHHHTCTTTGGG--EEEECSCGGGCCHH
T ss_pred cCEEEEECCCCcHHHH-hh---------hC-------CCCeEEEEECCHHHHHHHHHHhccCCc--eEEEECchhhCCHH
Confidence 4689999999999999 51 11 112477777766444433333321 11 11222455433232
Q ss_pred C-----CceeEEEecCc--------ccccCC
Q 018250 137 K-----STLHVVNSFNA--------MHWLSK 154 (359)
Q Consensus 137 ~-----~s~d~~~S~~a--------lHWLs~ 154 (359)
+ +..+.++|+.. +|||..
T Consensus 83 ~~~~~~~~~~~vvsNlPY~i~~~il~~ll~~ 113 (252)
T 1qyr_A 83 ELAEKMGQPLRVFGNLPYNISTPLMFHLFSY 113 (252)
T ss_dssp HHHHHHTSCEEEEEECCTTTHHHHHHHHHTT
T ss_pred HhhcccCCceEEEECCCCCccHHHHHHHHhc
Confidence 2 23578888765 566654
No 276
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=91.31 E-value=0.57 Score=44.03 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=58.9
Q ss_pred CcceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCC--C----cc--cccccC
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPP--R----KY--YAAGVP 127 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~--~----~~--~~~~vp 127 (359)
....+|+|||||+|..|..+++ +. +-..|+..|+..++- ..|. . .. +-.++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~--------~~-------gv~sV~Gvdlg~~~~-----~~P~~~~~~~~~iv~~~~~~- 138 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAA--------QK-------EVMSVKGYTLGIEGH-----EKPIHMQTLGWNIVKFKDKS- 138 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHT--------ST-------TEEEEEEECCCCTTS-----CCCCCCCBTTGGGEEEECSC-
T ss_pred CCCCEEEEcCCCCCHHHHHHHH--------hc-------CCceeeeEEeccccc-----cccccccccCCceEEeecCc-
Confidence 3468999999999999998852 11 123566667754320 0110 0 00 11111
Q ss_pred cccccCCCCCCceeEEEecCcccccCCCCcccccccccccCCCceeecCCCHHHHHHHHHHHHH-HHHHHHHHHHHhhcc
Q 018250 128 GSFHGRLFPKSTLHVVNSFNAMHWLSKTPKVNMLEKSLEWNQGSIKCTRFMKGVHETFQAQFRS-DFESILNARAEELVP 206 (359)
Q Consensus 128 gsfy~~l~p~~s~d~~~S~~alHWLs~~p~~~~~~~~~~~n~g~i~~~~~~~~~~~~y~~Q~~~-D~~~fL~~Ra~EL~p 206 (359)
+++ -++...+|+++|.-|-+ |-.+ +.+|+.. ++ |..-.+-|+|
T Consensus 139 -di~--~l~~~~~DlVlsD~APn--sG~~----------------------------~~D~~rs~~L---L~~A~~~Lkp 182 (300)
T 3eld_A 139 -NVF--TMPTEPSDTLLCDIGES--SSNP----------------------------LVERDRTMKV---LENFERWKHV 182 (300)
T ss_dssp -CTT--TSCCCCCSEEEECCCCC--CSSH----------------------------HHHHHHHHHH---HHHHHHHCCT
T ss_pred -eee--ecCCCCcCEEeecCcCC--CCCH----------------------------HHHHHHHHHH---HHHHHHHhcC
Confidence 221 24667888888866544 2111 1122221 23 6777788999
Q ss_pred C-ceeEEEecc
Q 018250 207 G-GLMVFSLIT 216 (359)
Q Consensus 207 G-G~lvl~~~g 216 (359)
| |.||+-.+-
T Consensus 183 G~G~FV~KvF~ 193 (300)
T 3eld_A 183 NTENFCVKVLA 193 (300)
T ss_dssp TCCEEEEEESS
T ss_pred CCCcEEEEecc
Confidence 9 999998874
No 277
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=91.26 E-value=0.049 Score=50.77 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=17.7
Q ss_pred cceEEEeecCCCCcccHHHH
Q 018250 57 YTVRIADLGCSVGPNTFISV 76 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~ 76 (359)
...+|+|+|||+|..|..++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La 61 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVI 61 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHH
T ss_pred CcCEEEEEccccHHHHHHHH
Confidence 35789999999999999885
No 278
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=90.25 E-value=1.8 Score=40.32 Aligned_cols=20 Identities=10% Similarity=0.096 Sum_probs=17.2
Q ss_pred cceEEEeecCCCCcccHHHH
Q 018250 57 YTVRIADLGCSVGPNTFISV 76 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~ 76 (359)
.+-+|+++||+.|..++.+.
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma 125 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMR 125 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHH
T ss_pred CCCcEEEeecCchHHHHHHH
Confidence 46799999999999888764
No 279
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=90.18 E-value=0.47 Score=44.08 Aligned_cols=28 Identities=25% Similarity=0.451 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 188 QFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 188 Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
.+..++..+++.-.+-|+|||.+++...
T Consensus 71 ~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 71 AFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 3445566778888899999999999875
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=89.56 E-value=0.76 Score=48.21 Aligned_cols=20 Identities=15% Similarity=0.174 Sum_probs=17.0
Q ss_pred ceEEEeecCCCCcccHHHHH
Q 018250 58 TVRIADLGCSVGPNTFISVQ 77 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~ 77 (359)
..+|+|.+||||...+..+.
T Consensus 191 ~~~llDP~CGSGt~lIeAa~ 210 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAM 210 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHH
Confidence 46799999999999887754
No 281
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=85.77 E-value=4.8 Score=37.88 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=26.0
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTEND 108 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~ND 108 (359)
..+|+|||||+|..|.-.+ .. ..--.|+.-|+-.++
T Consensus 95 ~~~VlDLGaapGGwsq~~~--------~~-------~gv~~V~avdvG~~~ 130 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMA--------TQ-------KRVQEVRGYTKGGPG 130 (321)
T ss_dssp CEEEEEETCTTCHHHHHHT--------TC-------TTEEEEEEECCCSTT
T ss_pred CCEEEEeCCCCCcHHHHHH--------hh-------cCCCEEEEEEcCCCC
Confidence 3499999999999998553 11 111369999998764
No 282
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=85.33 E-value=1.7 Score=40.03 Aligned_cols=21 Identities=24% Similarity=0.521 Sum_probs=17.6
Q ss_pred CcceEEEeecCCCCcccHHHH
Q 018250 56 SYTVRIADLGCSVGPNTFISV 76 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~ 76 (359)
....+|+||||+.|.=|.-.+
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa 92 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAA 92 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHT
T ss_pred CCCCEEEEcCCCCCHHHHHHh
Confidence 346899999999999888774
No 283
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=84.62 E-value=5.1 Score=37.42 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=18.3
Q ss_pred HHHHHHHHhhccCceeEEEecc
Q 018250 195 SILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 195 ~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
.|++..++-|+|||+|+.....
T Consensus 179 eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 179 AFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEecCC
Confidence 3788889999999999987643
No 284
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=83.99 E-value=0.49 Score=43.39 Aligned_cols=24 Identities=21% Similarity=0.166 Sum_probs=20.4
Q ss_pred CcceEEEeecCCCCcccHHHHHHH
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNI 79 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~i 79 (359)
.+..+|+|+|||+|.|++.+++..
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHH
Confidence 457999999999999999987543
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=82.59 E-value=2.3 Score=41.14 Aligned_cols=72 Identities=13% Similarity=-0.030 Sum_probs=47.3
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRLFP 136 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l~p 136 (359)
.-.+++||||++|.-|..++ ++ ...|+..|.-.-|- -....+ + +.-+-++.+....+
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~--------~r---------g~~V~aVD~~~l~~--~l~~~~-~---V~~~~~d~~~~~~~ 267 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLV--------KR---------NMWVYSVDNGPMAQ--SLMDTG-Q---VTWLREDGFKFRPT 267 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------HT---------TCEEEEECSSCCCH--HHHTTT-C---EEEECSCTTTCCCC
T ss_pred CCCEEEEeCcCCCHHHHHHH--------HC---------CCEEEEEEhhhcCh--hhccCC-C---eEEEeCccccccCC
Confidence 35799999999999998875 22 24899999754331 111112 1 12223466666677
Q ss_pred CCceeEEEecCcccc
Q 018250 137 KSTLHVVNSFNAMHW 151 (359)
Q Consensus 137 ~~s~d~~~S~~alHW 151 (359)
.+.+|+++|-.+.+|
T Consensus 268 ~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 268 RSNISWMVCDMVEKP 282 (375)
T ss_dssp SSCEEEEEECCSSCH
T ss_pred CCCcCEEEEcCCCCh
Confidence 788999999666555
No 286
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=82.39 E-value=1.9 Score=36.37 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=25.2
Q ss_pred ceEEEeecCCCCc-ccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCC
Q 018250 58 TVRIADLGCSVGP-NTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTE 106 (359)
Q Consensus 58 ~~~IaDlGCs~G~-nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~ 106 (359)
..+|+|+|||.|. ++..+. +. ..+.|+..|+-.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La--------~~--------~g~~V~atDInp 69 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIR--------KH--------SKVDLVLTDIKP 69 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHH--------HH--------SCCEEEEECSSC
T ss_pred CCcEEEEccCCChHHHHHHH--------Hh--------CCCeEEEEECCc
Confidence 4799999999995 988884 22 146888888764
No 287
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=79.72 E-value=0.56 Score=42.90 Aligned_cols=74 Identities=9% Similarity=0.084 Sum_probs=42.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCC-------CchHHHHHhCCC----Ccc-cccc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTE-------NDFNTLFRTLPP----RKY-YAAG 125 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~-------NDFn~lf~~l~~----~~~-~~~~ 125 (359)
..+|+|+|||+|..|+.++. . ..+|+..|... ......-++... +++ ++.
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~--------~---------g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~- 145 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLAS--------L---------GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHF- 145 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHH--------T---------TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEE-
T ss_pred cCeEEEeeCccCHHHHHHHH--------h---------CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEE-
Confidence 46899999999999998852 1 13788888876 332222111100 111 222
Q ss_pred cCcccccCC--CCC--CceeEEEecCcccc
Q 018250 126 VPGSFHGRL--FPK--STLHVVNSFNAMHW 151 (359)
Q Consensus 126 vpgsfy~~l--~p~--~s~d~~~S~~alHW 151 (359)
++..+-+ +|+ +++|+|++.-.+++
T Consensus 146 --~d~~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 146 --GNAAEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp --SCHHHHHHHHHHHHCCCSEEEECCCC--
T ss_pred --CCHHHHHHhhhccCCCccEEEECCCCCC
Confidence 3443322 444 78999998766655
No 288
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=79.01 E-value=1 Score=42.23 Aligned_cols=74 Identities=9% Similarity=-0.056 Sum_probs=43.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccccccCcccccCC--C
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYAAGVPGSFHGRL--F 135 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpgsfy~~l--~ 135 (359)
..+|+|+|||+|..|+.++ +++ |..+|+..|.........-+.+....--+.-+.++|.+.. +
T Consensus 27 g~~vLD~g~G~G~~s~~la--------~~~-------~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAIL--------EHC-------PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLL 91 (301)
T ss_dssp TCEEEETTCTTSHHHHHHH--------HHC-------TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHH--------HHC-------CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHH
Confidence 4689999999999999885 332 2458888888776655544444320001122234553321 2
Q ss_pred CC---CceeEEEec
Q 018250 136 PK---STLHVVNSF 146 (359)
Q Consensus 136 p~---~s~d~~~S~ 146 (359)
++ +++|.+++.
T Consensus 92 ~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 92 KTLGIEKVDGILMD 105 (301)
T ss_dssp HHTTCSCEEEEEEE
T ss_pred HhcCCCCCCEEEEc
Confidence 21 578888864
No 289
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=77.82 E-value=3.1 Score=39.67 Aligned_cols=18 Identities=17% Similarity=0.255 Sum_probs=16.1
Q ss_pred eEEEeecCCCCcccHHHH
Q 018250 59 VRIADLGCSVGPNTFISV 76 (359)
Q Consensus 59 ~~IaDlGCs~G~nt~~~~ 76 (359)
.+|+|+|||+|..|+.++
T Consensus 215 ~~vLDl~cG~G~~~l~la 232 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALA 232 (369)
T ss_dssp SEEEEESCTTSHHHHHHG
T ss_pred CEEEEccCCCCHHHHHHH
Confidence 579999999999999774
No 290
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=69.83 E-value=7.5 Score=36.38 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHhhccCceeEEEecc
Q 018250 189 FRSDFESILNARAEELVPGGLMVFSLIT 216 (359)
Q Consensus 189 ~~~D~~~fL~~Ra~EL~pGG~lvl~~~g 216 (359)
+...+...|+.-++-|+|||.+++....
T Consensus 59 ~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 59 YVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 4445666777778889999999998853
No 291
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=67.89 E-value=1.8 Score=42.41 Aligned_cols=19 Identities=16% Similarity=0.288 Sum_probs=16.5
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018250 58 TVRIADLGCSVGPNTFISV 76 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~ 76 (359)
..+|+|+|||+|..|+.+.
T Consensus 94 g~~VLDLgcG~G~~al~LA 112 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALM 112 (410)
T ss_dssp TCEEEESSCSSSHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHH
Confidence 3689999999999998774
No 292
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=62.86 E-value=15 Score=34.74 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=37.8
Q ss_pred CcceEEEeecC------CCCcccHHHHHHHHHHHHHHhhcCCCCCCC-ceEEecCCCCCchHHHHHhCCCCcccccccCc
Q 018250 56 SYTVRIADLGC------SVGPNTFISVQNIIEALEFKFQNLSLPVPD-FQVFFNDHTENDFNTLFRTLPPRKYYAAGVPG 128 (359)
Q Consensus 56 ~~~~~IaDlGC------s~G~nt~~~~~~ii~~~~~~~~~~~~~~p~-~~v~~nDLp~NDFn~lf~~l~~~~~~~~~vpg 128 (359)
|...+|+|+|+ +.|. . + .+++. |+ ..|+-+||- |+.+ . ..+++. |
T Consensus 108 p~gmrVLDLGA~s~kg~APGS--~-V--------Lr~~~------p~g~~VVavDL~--~~~s----d--a~~~Iq---G 159 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGT--A-V--------LRQWL------PTGTLLVDSDLN--DFVS----D--ADSTLI---G 159 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--H-H--------HHHHS------CTTCEEEEEESS--CCBC----S--SSEEEE---S
T ss_pred cCCCEEEeCCCCCCCCCCCcH--H-H--------HHHhC------CCCcEEEEeeCc--cccc----C--CCeEEE---c
Confidence 45799999995 6666 1 1 12321 33 478888885 3321 1 123444 4
Q ss_pred ccccCCCCCCceeEEEecCc
Q 018250 129 SFHGRLFPKSTLHVVNSFNA 148 (359)
Q Consensus 129 sfy~~l~p~~s~d~~~S~~a 148 (359)
++ ..+.....+|+|+|=.|
T Consensus 160 D~-~~~~~~~k~DLVISDMA 178 (344)
T 3r24_A 160 DC-ATVHTANKWDLIISDMY 178 (344)
T ss_dssp CG-GGEEESSCEEEEEECCC
T ss_pred cc-cccccCCCCCEEEecCC
Confidence 54 33545688999999443
No 293
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=62.41 E-value=2.6 Score=38.56 Aligned_cols=18 Identities=17% Similarity=0.423 Sum_probs=16.9
Q ss_pred eEEEeecCCCCcccHHHH
Q 018250 59 VRIADLGCSVGPNTFISV 76 (359)
Q Consensus 59 ~~IaDlGCs~G~nt~~~~ 76 (359)
.+|+|+|||+|..|+.++
T Consensus 90 ~~VLDl~~G~G~dal~lA 107 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLA 107 (258)
T ss_dssp CCEEETTCTTCHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHH
Confidence 789999999999999886
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=60.72 E-value=53 Score=32.85 Aligned_cols=22 Identities=14% Similarity=0.280 Sum_probs=17.5
Q ss_pred ceEEEeecCCCCcccHHHHHHH
Q 018250 58 TVRIADLGCSVGPNTFISVQNI 79 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~i 79 (359)
..+|+|-.||||..-+...+.+
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l 239 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHL 239 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHH
T ss_pred CCEEEeCCCCcchHHHHHHHHH
Confidence 4589999999999877766544
No 295
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=57.07 E-value=6.7 Score=36.87 Aligned_cols=23 Identities=26% Similarity=0.511 Sum_probs=19.4
Q ss_pred CcceEEEeecCCCCcccHHHHHH
Q 018250 56 SYTVRIADLGCSVGPNTFISVQN 78 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ 78 (359)
...++|+|+|-|||.|++..+..
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~ 117 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKH 117 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHH
T ss_pred CCCcEEEEeCCCccHHHHHHHHH
Confidence 45799999999999999877643
No 296
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=55.50 E-value=16 Score=32.69 Aligned_cols=23 Identities=9% Similarity=-0.057 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhhccCceeEEEe
Q 018250 192 DFESILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 192 D~~~fL~~Ra~EL~pGG~lvl~~ 214 (359)
.+..+|..-.+-|+|||.+++..
T Consensus 52 ~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 52 FTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCeEEEEEc
Confidence 34455555567899999998875
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=55.42 E-value=8 Score=35.54 Aligned_cols=19 Identities=11% Similarity=0.025 Sum_probs=16.1
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018250 58 TVRIADLGCSVGPNTFISV 76 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~ 76 (359)
.-+|+|++||+|..++.++
T Consensus 236 ~~~vlD~f~GsGt~~~~a~ 254 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAA 254 (297)
T ss_dssp TCEEEETTCTTTHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHH
Confidence 4589999999999888764
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=52.02 E-value=5.8 Score=36.24 Aligned_cols=36 Identities=19% Similarity=0.124 Sum_probs=25.9
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCc
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTEND 108 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~ND 108 (359)
..+|+|||||+|..|.-.+ .+. .--.|+.-|+-..+
T Consensus 79 g~~VvDLGaapGGWSq~~a--------~~~-------g~~~V~avdvG~~g 114 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCA--------GLK-------KVTEVRGYTKGGPG 114 (267)
T ss_dssp CEEEEEESCTTSHHHHHHH--------TST-------TEEEEEEECCCSTT
T ss_pred CCEEEEcCCCCCcHHHHHH--------Hhc-------CCCEEEEEecCCCC
Confidence 3599999999999998663 111 11378999987654
No 299
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=49.95 E-value=16 Score=43.76 Aligned_cols=79 Identities=10% Similarity=0.026 Sum_probs=37.6
Q ss_pred cceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhCCCCcccc-cccCc-ccc--c
Q 018250 57 YTVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTLPPRKYYA-AGVPG-SFH--G 132 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~-~~vpg-sfy--~ 132 (359)
...+|+++|.|+|..|..+++.+ ... +....+..+.|....-|...- +. |- ..+.. .+- .
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l--------~~~--~~~~~~yt~td~s~~~~~~a~-----~~-f~~~di~~~~~d~~~ 1303 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALL--------NTQ--PVMDLDYTATDRNPQALEAAQ-----AK-LEQLHVTQGQWDPAN 1303 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHT--------TTS--SSCEEEEEEECSSSSSTTTTT-----TT-HHHHTEEEECCCSSC
T ss_pred CCceEEEECCCccHHHHHHHHhh--------ccc--CcccceEEEecCChHHHHHHH-----HH-hhhcccccccccccc
Confidence 36899999999999887664322 110 112346778887754432110 00 00 00000 000 0
Q ss_pred -CCCCCCceeEEEecCcccc
Q 018250 133 -RLFPKSTLHVVNSFNAMHW 151 (359)
Q Consensus 133 -~l~p~~s~d~~~S~~alHW 151 (359)
+.|...++|+++.+..||=
T Consensus 1304 ~~~~~~~~ydlvia~~vl~~ 1323 (2512)
T 2vz8_A 1304 PAPGSLGKADLLVCNCALAT 1323 (2512)
T ss_dssp CCC-----CCEEEEECC---
T ss_pred cccCCCCceeEEEEcccccc
Confidence 1234567999999888874
No 300
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=41.52 E-value=41 Score=32.06 Aligned_cols=44 Identities=20% Similarity=0.104 Sum_probs=31.8
Q ss_pred ceEEEeecCCCCcccHHHHHHHHHHHHHHhhcCCCCCCCceEEecCCCCCchHHHHHhC
Q 018250 58 TVRIADLGCSVGPNTFISVQNIIEALEFKFQNLSLPVPDFQVFFNDHTENDFNTLFRTL 116 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l 116 (359)
..+|+|+-||.|.=|..+++ .. ..-.++.+|....-...|-+.+
T Consensus 149 g~~VLD~CAaPGGKT~~la~--------~~-------~~~~l~A~D~~~~R~~~l~~~l 192 (359)
T 4fzv_A 149 GDIVLDLCAAPGGKTLALLQ--------TG-------CCRNLAANDLSPSRIARLQKIL 192 (359)
T ss_dssp TEEEEESSCTTCHHHHHHHH--------TT-------CEEEEEEECSCHHHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHH--------hc-------CCCcEEEEcCCHHHHHHHHHHH
Confidence 47999999999999987752 11 1246899998876666665544
No 301
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=40.82 E-value=22 Score=33.24 Aligned_cols=23 Identities=17% Similarity=0.066 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhhccCceeEEEec
Q 018250 193 FESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 193 ~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
+...|..-.+-|+|||.+++...
T Consensus 85 ~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 85 AKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCeEEEEEcC
Confidence 34455555678999999999764
No 302
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=40.76 E-value=14 Score=38.18 Aligned_cols=23 Identities=17% Similarity=0.218 Sum_probs=20.5
Q ss_pred CcceEEEeecCCCCcccHHHHHH
Q 018250 56 SYTVRIADLGCSVGPNTFISVQN 78 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~ 78 (359)
.+.++|+|+|.|+|.|.+..++.
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~ 79 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRD 79 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHH
T ss_pred CCceEEEEecCchHHHHHHHHHH
Confidence 45799999999999999999765
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=40.19 E-value=38 Score=32.25 Aligned_cols=44 Identities=23% Similarity=0.260 Sum_probs=33.4
Q ss_pred cceEEEeecCCCCcccHHHHHH--------------HHHHHHHHhhcCCCCCCCceEEecCCC
Q 018250 57 YTVRIADLGCSVGPNTFISVQN--------------IIEALEFKFQNLSLPVPDFQVFFNDHT 105 (359)
Q Consensus 57 ~~~~IaDlGCs~G~nt~~~~~~--------------ii~~~~~~~~~~~~~~p~~~v~~nDLp 105 (359)
...+|+|+|.|.|..|..+++. ++..|++.+ . .+.++++..|.-
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~----~~~l~ii~~D~l 115 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E----GSPLQILKRDPY 115 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T----TSSCEEECSCTT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c----CCCEEEEECCcc
Confidence 3578999999999999999864 445555554 1 346899999984
No 304
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=35.19 E-value=32 Score=33.22 Aligned_cols=20 Identities=20% Similarity=0.094 Sum_probs=17.0
Q ss_pred HHHHHHHHhhccCceeEEEe
Q 018250 195 SILNARAEELVPGGLMVFSL 214 (359)
Q Consensus 195 ~fL~~Ra~EL~pGG~lvl~~ 214 (359)
.|++...+-|+|||+|+...
T Consensus 312 eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 312 LILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEec
Confidence 57888889999999998764
No 305
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=33.15 E-value=21 Score=36.58 Aligned_cols=24 Identities=21% Similarity=0.166 Sum_probs=20.9
Q ss_pred CcceEEEeecCCCCcccHHHHHHH
Q 018250 56 SYTVRIADLGCSVGPNTFISVQNI 79 (359)
Q Consensus 56 ~~~~~IaDlGCs~G~nt~~~~~~i 79 (359)
...++|+|+|-|+|.|.+..++..
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~ 88 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAF 88 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCceEEEEeCCchHHHHHHHHHHH
Confidence 457999999999999999998653
No 306
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=27.32 E-value=45 Score=29.67 Aligned_cols=19 Identities=11% Similarity=0.092 Sum_probs=15.9
Q ss_pred ceEEEeecCCCCcccHHHH
Q 018250 58 TVRIADLGCSVGPNTFISV 76 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~ 76 (359)
.-.|+|..||+|..++..+
T Consensus 213 ~~~vlD~f~GsGtt~~~a~ 231 (260)
T 1g60_A 213 NDLVLDCFMGSGTTAIVAK 231 (260)
T ss_dssp TCEEEESSCTTCHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHH
Confidence 4689999999999887764
No 307
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=24.71 E-value=46 Score=24.58 Aligned_cols=32 Identities=28% Similarity=0.548 Sum_probs=26.2
Q ss_pred ccCCccccCCCHHHHHHHHH----hCCceeEeEEEEe
Q 018250 254 RTFNVPAYFPYVEELESLIQ----RNGHFAMERMQQL 286 (359)
Q Consensus 254 d~f~~P~y~ps~~E~~~~i~----~~G~F~i~~le~~ 286 (359)
.+|-+|.|..|++|-.++-+ ++| |.|.++.--
T Consensus 45 ~s~EVPV~A~sLdEAlE~AE~eYeeaG-F~V~RVRPe 80 (84)
T 2lmc_A 45 HSFEVPIYAETLDEALELAEWQYVPAG-FEVTRVRPC 80 (84)
T ss_dssp CEEEEEECCSSHHHHHHHHHHTTGGGT-CEEEEEEEE
T ss_pred ceEEEeeecccHHHHHHHHHHHhhhcc-ceEEEeccc
Confidence 35779999999999988877 357 999888654
No 308
>2v1n_A KIN17, protein KIN homolog; nuclear protein, winged helix motif; NMR {Homo sapiens}
Probab=23.52 E-value=46 Score=26.40 Aligned_cols=26 Identities=27% Similarity=0.428 Sum_probs=21.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH
Q 018250 177 FMKGVHETFQAQFRSDFESILNARAE 202 (359)
Q Consensus 177 ~~~~~~~~y~~Q~~~D~~~fL~~Ra~ 202 (359)
.|..+...|.+||++||-..|+.|..
T Consensus 11 n~~k~i~~fS~eF~~~Fl~lLr~~~g 36 (111)
T 2v1n_A 11 NPQQFMDYFSEEFRNDFLELLRRRFG 36 (111)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHHHTS
T ss_pred CHhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 35567789999999999999998653
No 309
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=23.45 E-value=3.9e+02 Score=23.75 Aligned_cols=37 Identities=8% Similarity=0.136 Sum_probs=23.1
Q ss_pred EeecCCCCcccHHHHHHHHHHHHHHhhcCCCCC-CCceEEecC
Q 018250 62 ADLGCSVGPNTFISVQNIIEALEFKFQNLSLPV-PDFQVFFND 103 (359)
Q Consensus 62 aDlGCs~G~nt~~~~~~ii~~~~~~~~~~~~~~-p~~~v~~nD 103 (359)
+-||-++|..-..+.+.+++..++.. .. ..+.+|+.|
T Consensus 38 ~~l~LsgGstP~~ly~~L~~~~~~~i-----dw~~~v~~f~~D 75 (266)
T 3eb9_A 38 LSIALAGGSTPKMTYARLHDEHLNLL-----REKRALRFFMGD 75 (266)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHH-----TTSCCEEEEESE
T ss_pred EEEEEcCCCCHHHHHHHHHHHhhcCC-----ChHHcEEEEeee
Confidence 45788888877777666664333221 24 456777777
No 310
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=23.03 E-value=64 Score=25.91 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=34.8
Q ss_pred CCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc----------cCceeEEEeccCCCCCCCCCcchhHHHHHHHH
Q 018250 168 NQGSIKCTRFMKGVHETFQAQFRSDFESILNARAEELV----------PGGLMVFSLITGPSGIPFADTVQGATYNFLGS 237 (359)
Q Consensus 168 n~g~i~~~~~~~~~~~~y~~Q~~~D~~~fL~~Ra~EL~----------pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~ 237 (359)
|+-.|.|++-|+.|.+..++.+++ -++|.. -.|.|++.|-|.+ .+.+..
T Consensus 41 n~l~i~itgvpeqvrkelakeaer--------l~~efni~v~y~imgsgsgvm~i~f~gdd-------------lea~ek 99 (170)
T 4hhu_A 41 NRLVIVITGVPEQVRKELAKEAER--------LKAEFNINVQYQIMGSGSGVMVIVFEGDD-------------LEALEK 99 (170)
T ss_dssp TEEEEEEESCCHHHHHHHHHHHHH--------HHHHHTCEEEEEEECTTCCEEEEEEECSC-------------HHHHHH
T ss_pred CEEEEEEeCCcHHHHHHHHHHHHH--------HHHhcceEEEEEEEeCCceEEEEEEecCc-------------HHHHHH
Confidence 333466778888887766655433 233332 2366666665433 478888
Q ss_pred HHHHHHHc
Q 018250 238 CLWDLAKM 245 (359)
Q Consensus 238 al~~lv~e 245 (359)
+|.+|..+
T Consensus 100 alkemirq 107 (170)
T 4hhu_A 100 ALKEMIRQ 107 (170)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98888654
No 311
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=23.01 E-value=44 Score=30.95 Aligned_cols=20 Identities=5% Similarity=-0.235 Sum_probs=17.7
Q ss_pred ceEEEeecCCCCcccHHHHH
Q 018250 58 TVRIADLGCSVGPNTFISVQ 77 (359)
Q Consensus 58 ~~~IaDlGCs~G~nt~~~~~ 77 (359)
..+++|.+||.|.-|..+++
T Consensus 23 gg~~VD~T~G~GGHS~~il~ 42 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILE 42 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHH
Confidence 46899999999999999864
No 312
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=22.62 E-value=57 Score=30.15 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 183 ETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 183 ~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
..|-.+--..+..+|..-..-|+|||+|++..+
T Consensus 202 RI~VN~EL~~L~~~L~~a~~~L~~gGrl~visf 234 (285)
T 1wg8_A 202 RIYVNDELNALKEFLEQAAEVLAPGGRLVVIAF 234 (285)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 455566667899999999999999999988876
No 313
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=22.20 E-value=68 Score=30.49 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 183 ETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 183 ~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
..+-.+--..+..+|..--+-|+|||+|++..+
T Consensus 243 RI~VN~EL~~L~~~L~~a~~~L~~gGRl~VISF 275 (347)
T 3tka_A 243 RIWVNSELEEIEQALKSSLNVLAPGGRLSIISF 275 (347)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 344555567799999999999999999999886
No 314
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=21.59 E-value=58 Score=30.06 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCceeEEEec
Q 018250 183 ETFQAQFRSDFESILNARAEELVPGGLMVFSLI 215 (359)
Q Consensus 183 ~~y~~Q~~~D~~~fL~~Ra~EL~pGG~lvl~~~ 215 (359)
..+-.+--..+..+|..-..-|+|||+|++..+
T Consensus 214 Ri~vn~el~~l~~~l~~~~~~l~~ggr~~visf 246 (301)
T 1m6y_A 214 RIYVNRELENLKEFLKKAEDLLNPGGRIVVISF 246 (301)
T ss_dssp HHHHHTHHHHHHHHHHHGGGGEEEEEEEEEEES
T ss_pred HHHHhcCHHHHHHHHHHHHHhhCCCCEEEEEec
Confidence 344555557789999999999999999988876
No 315
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=20.65 E-value=39 Score=25.64 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHcCCCChh----hhccCCccccCCCHHHHHHHHHh
Q 018250 233 NFLGSCLWDLAKMGVISEE----KARTFNVPAYFPYVEELESLIQR 274 (359)
Q Consensus 233 ~~l~~al~~lv~eGli~~e----~~d~f~~P~y~ps~~E~~~~i~~ 274 (359)
..+..++..|..+|+|... ...+..+..|..+.+++.+.++.
T Consensus 48 ~tV~~~L~~L~~~GlV~~~~~~~~~~g~~v~~~~~~~~~i~~~~~~ 93 (110)
T 1q1h_A 48 NDVRKKLNLLEEQGFVSYRKTRDKDSGWFIYYWKPNIDQINEILLN 93 (110)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEC---CCCCEEEEECTHHHHC-----
T ss_pred HHHHHHHHHHHHCCCEEEEecccCCCceEEEEeecCHHHHHHHHHH
Confidence 5678899999999999766 33444444457788888776653
No 316
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=20.06 E-value=5e+02 Score=23.64 Aligned_cols=74 Identities=7% Similarity=0.049 Sum_probs=38.1
Q ss_pred HHHHHHHHHhhccCceeEEEeccCCCCCCCCCcchhHHHHHHHHHH-HHHHHcCCCChhhhc-cCCccccCCC-HHHHHH
Q 018250 194 ESILNARAEELVPGGLMVFSLITGPSGIPFADTVQGATYNFLGSCL-WDLAKMGVISEEKAR-TFNVPAYFPY-VEELES 270 (359)
Q Consensus 194 ~~fL~~Ra~EL~pGG~lvl~~~g~~~~~~~~~~~~~~~~~~l~~al-~~lv~eGli~~e~~d-~f~~P~y~ps-~~E~~~ 270 (359)
..+|+.-+.-+.||+.+++.....+. + .+ ....+..+ ..+.+.|. +.+ .+..-+++++ .+|+.+
T Consensus 198 ~~ll~~l~~~~~~gs~l~~d~~~~~~--~-----~~--~~~~~~~~~~~~~~~g~----~~~~~l~~~~~~~~~~~~~~~ 264 (310)
T 2uyo_A 198 DGLFTEIGGLSAVGSRIAVETSPLHG--D-----EW--REQMQLRFRRVSDALGF----EQAVDVQELIYHDENRAVVAD 264 (310)
T ss_dssp HHHHHHHHHTCCTTCEEEEECCCTTC--S-----HH--HHHHHHHHHHHHC---------------CCTTCCTTCCCHHH
T ss_pred HHHHHHHHHhCCCCeEEEEEecCCCC--c-----ch--hHHHHHHHHHHHHHcCC----cCCCCccccccCCCChHHHHH
Confidence 34565555667899999999875432 1 00 01112122 11112220 000 1112234468 899999
Q ss_pred HHHhCCceeEe
Q 018250 271 LIQRNGHFAME 281 (359)
Q Consensus 271 ~i~~~G~F~i~ 281 (359)
.+.+.| |+..
T Consensus 265 ~f~~~G-~~~~ 274 (310)
T 2uyo_A 265 WLNRHG-WRAT 274 (310)
T ss_dssp HHTTTT-EEEE
T ss_pred HHHHCc-Cccc
Confidence 999999 9876
Done!