Query 018252
Match_columns 359
No_of_seqs 162 out of 1107
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 12:20:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018252.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018252hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydo_A HMG-COA lyase; TIM-barr 100.0 1.9E-57 6.4E-62 440.7 25.8 234 122-355 2-235 (307)
2 2cw6_A Hydroxymethylglutaryl-C 100.0 5.2E-55 1.8E-59 421.2 26.6 234 122-355 1-234 (298)
3 2ftp_A Hydroxymethylglutaryl-C 100.0 5E-54 1.7E-58 415.2 28.4 234 122-355 4-237 (302)
4 1ydn_A Hydroxymethylglutaryl-C 100.0 9.3E-52 3.2E-56 397.3 26.1 233 123-355 1-233 (295)
5 3rmj_A 2-isopropylmalate synth 100.0 3.9E-51 1.3E-55 405.4 24.6 222 123-355 9-238 (370)
6 3eeg_A 2-isopropylmalate synth 100.0 2.5E-51 8.5E-56 400.6 17.1 223 122-355 2-232 (325)
7 3ble_A Citramalate synthase fr 100.0 2.9E-50 9.8E-55 394.8 22.7 226 121-355 14-247 (337)
8 3ewb_X 2-isopropylmalate synth 100.0 1.2E-49 4E-54 383.7 23.8 220 125-355 4-231 (293)
9 3hq1_A 2-isopropylmalate synth 100.0 1.6E-48 5.3E-53 406.9 21.6 256 92-355 39-313 (644)
10 3ivs_A Homocitrate synthase, m 100.0 3E-47 1E-51 382.6 23.1 223 121-355 34-257 (423)
11 2ztj_A Homocitrate synthase; ( 100.0 1.2E-45 3.9E-50 367.7 23.7 218 125-355 2-223 (382)
12 1nvm_A HOA, 4-hydroxy-2-oxoval 100.0 6.8E-43 2.3E-47 343.2 23.7 213 123-355 5-228 (345)
13 2nx9_A Oxaloacetate decarboxyl 100.0 2.5E-41 8.5E-46 343.6 22.1 214 121-355 2-235 (464)
14 1rqb_A Transcarboxylase 5S sub 100.0 2.8E-41 9.5E-46 347.9 20.6 212 124-355 22-254 (539)
15 3dxi_A Putative aldolase; TIM 100.0 7.3E-41 2.5E-45 325.9 16.4 208 126-355 2-220 (320)
16 3bg3_A Pyruvate carboxylase, m 100.0 5E-38 1.7E-42 333.3 24.1 212 124-355 100-339 (718)
17 2qf7_A Pyruvate carboxylase pr 100.0 3.9E-35 1.3E-39 326.0 19.5 216 124-355 548-786 (1165)
18 3hbl_A Pyruvate carboxylase; T 100.0 9.1E-35 3.1E-39 322.6 21.6 216 123-355 529-769 (1150)
19 2ekc_A AQ_1548, tryptophan syn 98.8 1.6E-07 5.6E-12 88.3 15.9 179 144-352 27-233 (262)
20 3t7v_A Methylornithine synthas 98.5 3.8E-06 1.3E-10 81.3 18.0 199 143-355 89-302 (350)
21 3nav_A Tryptophan synthase alp 98.3 5.6E-06 1.9E-10 78.5 13.3 177 145-351 31-235 (271)
22 3vnd_A TSA, tryptophan synthas 98.3 6.1E-06 2.1E-10 78.1 12.3 178 144-351 28-233 (267)
23 1qop_A Tryptophan synthase alp 98.3 1.6E-05 5.5E-10 74.7 15.1 175 144-352 27-233 (268)
24 3f4w_A Putative hexulose 6 pho 98.1 1E-05 3.4E-10 72.6 9.6 170 144-352 9-186 (211)
25 1rd5_A Tryptophan synthase alp 98.0 0.00016 5.6E-09 67.2 15.5 176 145-353 29-230 (262)
26 3iix_A Biotin synthetase, puta 97.9 0.00085 2.9E-08 64.2 19.0 194 143-353 82-293 (348)
27 2isw_A Putative fructose-1,6-b 97.7 0.0014 4.8E-08 63.5 16.7 203 136-353 15-255 (323)
28 3tha_A Tryptophan synthase alp 97.6 0.00095 3.2E-08 62.6 13.2 172 145-350 25-224 (252)
29 3lab_A Putative KDPG (2-keto-3 97.4 0.0024 8.3E-08 58.5 13.9 152 144-349 21-183 (217)
30 1r30_A Biotin synthase; SAM ra 97.4 0.031 1.1E-06 54.1 22.6 191 143-350 97-307 (369)
31 3q94_A Fructose-bisphosphate a 97.4 0.0068 2.3E-07 57.8 17.1 198 137-353 19-236 (288)
32 1rvg_A Fructose-1,6-bisphospha 97.4 0.0056 1.9E-07 58.8 16.6 195 143-353 23-253 (305)
33 4e38_A Keto-hydroxyglutarate-a 97.4 0.0029 9.8E-08 58.6 13.6 151 145-349 43-198 (232)
34 1wa3_A 2-keto-3-deoxy-6-phosph 97.2 0.027 9.1E-07 49.8 18.4 156 145-352 19-177 (205)
35 1gvf_A Tagatose-bisphosphate a 97.2 0.0085 2.9E-07 57.1 15.4 189 143-353 24-232 (286)
36 2dqw_A Dihydropteroate synthas 97.1 0.022 7.6E-07 54.4 16.9 201 128-352 33-269 (294)
37 1w8s_A FBP aldolase, fructose- 97.1 0.0099 3.4E-07 55.6 14.2 179 146-352 39-230 (263)
38 1vli_A Spore coat polysacchari 97.0 0.018 6.2E-07 57.0 16.5 183 143-355 39-250 (385)
39 1geq_A Tryptophan synthase alp 97.0 0.049 1.7E-06 49.5 18.4 175 144-353 15-220 (248)
40 3txv_A Probable tagatose 6-pho 97.0 0.025 8.4E-07 56.9 17.5 148 204-353 114-289 (450)
41 1n7k_A Deoxyribose-phosphate a 97.0 0.034 1.2E-06 51.4 17.2 178 143-355 31-223 (234)
42 3r12_A Deoxyribose-phosphate a 97.0 0.062 2.1E-06 50.4 19.1 192 128-356 45-248 (260)
43 3n9r_A Fructose-bisphosphate a 97.0 0.011 3.7E-07 56.9 14.1 193 143-353 23-255 (307)
44 3oa3_A Aldolase; structural ge 97.0 0.076 2.6E-06 50.5 19.4 195 128-356 60-266 (288)
45 1h1y_A D-ribulose-5-phosphate 96.9 0.026 8.9E-07 51.2 15.4 171 148-351 19-199 (228)
46 1ub3_A Aldolase protein; schif 96.9 0.025 8.6E-07 51.7 15.1 182 143-355 14-207 (220)
47 1to3_A Putative aldolase YIHT; 96.9 0.047 1.6E-06 52.2 17.4 138 205-352 112-253 (304)
48 1eye_A DHPS 1, dihydropteroate 96.8 0.16 5.6E-06 47.9 20.3 201 129-352 11-254 (280)
49 3ovp_A Ribulose-phosphate 3-ep 96.8 0.01 3.4E-07 54.5 11.4 165 147-350 16-194 (228)
50 2yci_X 5-methyltetrahydrofolat 96.8 0.049 1.7E-06 51.3 16.4 196 128-349 15-234 (271)
51 1p1x_A Deoxyribose-phosphate a 96.8 0.06 2.1E-06 50.5 16.7 182 144-348 24-222 (260)
52 1tqj_A Ribulose-phosphate 3-ep 96.8 0.0093 3.2E-07 54.6 11.0 171 147-351 16-199 (230)
53 3tr9_A Dihydropteroate synthas 96.7 0.17 5.8E-06 48.7 19.9 203 127-352 31-273 (314)
54 2yw3_A 4-hydroxy-2-oxoglutarat 96.7 0.025 8.4E-07 51.0 13.4 154 147-352 24-178 (207)
55 3ngj_A Deoxyribose-phosphate a 96.7 0.047 1.6E-06 50.6 15.4 191 129-356 30-232 (239)
56 2wqp_A Polysialic acid capsule 96.7 0.064 2.2E-06 52.4 16.9 181 144-355 31-238 (349)
57 3pm6_A Putative fructose-bisph 96.6 0.049 1.7E-06 52.3 15.1 199 135-353 23-251 (306)
58 2qjg_A Putative aldolase MJ040 96.6 0.071 2.4E-06 49.2 15.7 173 147-352 44-236 (273)
59 1vcv_A Probable deoxyribose-ph 96.5 0.23 7.8E-06 45.6 18.7 185 143-358 12-225 (226)
60 3ajx_A 3-hexulose-6-phosphate 96.5 0.075 2.6E-06 46.8 15.0 165 145-351 10-184 (207)
61 1aj0_A DHPS, dihydropteroate s 96.5 0.12 4.1E-06 49.0 16.9 205 127-352 18-256 (282)
62 3ndo_A Deoxyribose-phosphate a 96.5 0.14 4.8E-06 47.2 16.7 194 129-356 16-222 (231)
63 1rpx_A Protein (ribulose-phosp 96.4 0.041 1.4E-06 49.6 12.4 171 148-353 23-207 (230)
64 1vhc_A Putative KHG/KDPG aldol 96.3 0.13 4.5E-06 46.9 15.7 160 145-355 26-188 (224)
65 1mxs_A KDPG aldolase; 2-keto-3 96.2 0.14 4.7E-06 46.8 15.1 156 146-355 36-197 (225)
66 3q58_A N-acetylmannosamine-6-p 96.1 0.32 1.1E-05 44.4 17.3 170 128-352 20-209 (229)
67 3ctl_A D-allulose-6-phosphate 96.1 0.04 1.4E-06 50.6 11.2 166 151-351 16-193 (231)
68 3igs_A N-acetylmannosamine-6-p 96.1 0.36 1.2E-05 44.1 17.6 170 128-352 20-209 (232)
69 1tv8_A MOAA, molybdenum cofact 96.1 0.18 6E-06 47.9 15.9 135 143-292 48-190 (340)
70 2y5s_A DHPS, dihydropteroate s 96.1 0.48 1.7E-05 45.1 18.8 200 128-352 27-271 (294)
71 3inp_A D-ribulose-phosphate 3- 96.0 0.01 3.4E-07 55.3 6.3 166 148-351 40-221 (246)
72 1wbh_A KHG/KDPG aldolase; lyas 95.9 0.29 9.8E-06 44.2 15.8 160 145-355 25-187 (214)
73 2qgq_A Protein TM_1862; alpha- 95.8 0.33 1.1E-05 45.7 16.3 142 144-295 32-189 (304)
74 2v82_A 2-dehydro-3-deoxy-6-pho 95.8 0.49 1.7E-05 41.7 16.5 157 145-352 16-175 (212)
75 3nvt_A 3-deoxy-D-arabino-heptu 95.8 0.14 4.9E-06 50.5 14.0 177 146-352 154-347 (385)
76 1mzh_A Deoxyribose-phosphate a 95.8 0.85 2.9E-05 41.3 18.3 178 143-354 15-205 (225)
77 2vp8_A Dihydropteroate synthas 95.7 0.2 6.8E-06 48.3 14.6 199 127-352 45-288 (318)
78 2h9a_B CO dehydrogenase/acetyl 95.7 0.098 3.3E-06 50.2 12.1 141 127-301 51-211 (310)
79 3glc_A Aldolase LSRF; TIM barr 95.7 0.15 5.2E-06 48.6 13.4 125 206-352 130-256 (295)
80 4hb7_A Dihydropteroate synthas 95.7 0.43 1.5E-05 45.0 16.2 200 127-351 10-242 (270)
81 3jr2_A Hexulose-6-phosphate sy 95.6 0.067 2.3E-06 48.1 10.1 167 144-351 15-192 (218)
82 1h5y_A HISF; histidine biosynt 95.5 0.27 9.4E-06 43.8 14.1 181 148-352 33-226 (253)
83 1zco_A 2-dehydro-3-deoxyphosph 95.5 0.47 1.6E-05 44.3 16.0 179 145-354 34-230 (262)
84 1vzw_A Phosphoribosyl isomeras 95.5 0.44 1.5E-05 42.9 15.4 173 149-351 33-220 (244)
85 1jub_A Dihydroorotate dehydrog 95.5 1.5 5E-05 41.1 19.4 186 151-353 26-271 (311)
86 1dos_A Aldolase class II; lyas 95.4 0.68 2.3E-05 45.3 17.2 205 135-353 25-288 (358)
87 3g8r_A Probable spore coat pol 95.4 0.26 8.8E-06 48.1 14.0 134 193-355 90-227 (350)
88 3cu2_A Ribulose-5-phosphate 3- 95.3 0.18 6.3E-06 46.4 12.3 168 150-351 28-215 (237)
89 3gr7_A NADPH dehydrogenase; fl 95.3 0.45 1.5E-05 45.9 15.4 140 207-352 150-306 (340)
90 1tx2_A DHPS, dihydropteroate s 95.2 0.5 1.7E-05 45.0 15.3 202 127-352 43-275 (297)
91 1f6y_A 5-methyltetrahydrofolat 95.2 0.083 2.8E-06 49.4 9.7 189 134-350 15-226 (262)
92 2a4a_A Deoxyribose-phosphate a 95.2 0.97 3.3E-05 42.7 17.1 151 144-317 44-214 (281)
93 1olt_A Oxygen-independent copr 95.2 0.17 5.8E-06 50.6 12.6 84 205-296 154-239 (457)
94 1qtw_A Endonuclease IV; DNA re 95.2 1 3.6E-05 40.6 16.9 172 150-333 14-222 (285)
95 3elf_A Fructose-bisphosphate a 95.2 0.19 6.6E-06 49.0 12.3 203 136-353 18-276 (349)
96 3noy_A 4-hydroxy-3-methylbut-2 95.1 1.2 3.9E-05 43.6 17.6 162 145-335 43-217 (366)
97 1yxy_A Putative N-acetylmannos 95.0 0.77 2.6E-05 41.1 15.3 158 149-352 37-214 (234)
98 1y0e_A Putative N-acetylmannos 95.0 1.7 5.9E-05 38.3 18.6 162 146-352 21-203 (223)
99 2vef_A Dihydropteroate synthas 95.0 0.84 2.9E-05 43.7 16.3 200 128-352 14-283 (314)
100 3qm3_A Fructose-bisphosphate a 95.0 0.31 1.1E-05 47.7 13.3 206 136-353 29-287 (357)
101 2q02_A Putative cytoplasmic pr 95.0 0.86 2.9E-05 40.8 15.6 162 151-331 22-201 (272)
102 3k13_A 5-methyltetrahydrofolat 95.0 0.23 7.8E-06 47.4 12.0 195 129-350 18-251 (300)
103 3sz8_A 2-dehydro-3-deoxyphosph 94.9 0.28 9.6E-06 46.5 12.5 180 146-353 32-243 (285)
104 3qja_A IGPS, indole-3-glycerol 94.9 1.3 4.4E-05 41.5 17.0 164 149-351 73-240 (272)
105 4h3d_A 3-dehydroquinate dehydr 94.9 1.3 4.4E-05 41.1 16.8 176 122-325 3-205 (258)
106 3ih1_A Methylisocitrate lyase; 94.8 1.3 4.3E-05 42.4 16.8 146 195-350 29-192 (305)
107 4eiv_A Deoxyribose-phosphate a 94.8 2.2 7.4E-05 40.7 18.1 164 129-318 29-209 (297)
108 2e6f_A Dihydroorotate dehydrog 94.6 2.3 8E-05 39.8 18.1 185 152-353 29-273 (314)
109 3hgj_A Chromate reductase; TIM 94.6 0.97 3.3E-05 43.6 15.7 140 207-352 158-317 (349)
110 1vs1_A 3-deoxy-7-phosphoheptul 94.5 1.4 4.7E-05 41.5 16.1 179 146-354 50-245 (276)
111 2gou_A Oxidoreductase, FMN-bin 94.5 0.63 2.1E-05 45.3 14.2 137 208-352 168-321 (365)
112 1z41_A YQJM, probable NADH-dep 94.5 1.1 3.9E-05 42.8 15.9 139 207-352 150-306 (338)
113 2fli_A Ribulose-phosphate 3-ep 94.5 0.7 2.4E-05 40.8 13.5 172 147-353 15-198 (220)
114 3aam_A Endonuclease IV, endoiv 94.5 0.92 3.1E-05 40.9 14.5 164 149-333 15-210 (270)
115 1tqx_A D-ribulose-5-phosphate 94.4 0.67 2.3E-05 42.3 13.3 165 149-351 19-199 (227)
116 1ep3_A Dihydroorotate dehydrog 94.3 0.38 1.3E-05 44.9 11.8 77 275-353 109-196 (311)
117 3aal_A Probable endonuclease 4 94.3 2.4 8.3E-05 38.9 17.2 173 150-333 20-224 (303)
118 3rys_A Adenosine deaminase 1; 94.2 2.3 7.9E-05 41.0 17.3 134 207-353 87-224 (343)
119 2y88_A Phosphoribosyl isomeras 94.2 0.57 1.9E-05 42.1 12.3 173 149-351 32-223 (244)
120 1vr6_A Phospho-2-dehydro-3-deo 94.1 1.9 6.5E-05 42.0 16.6 179 146-354 118-313 (350)
121 3l5l_A Xenobiotic reductase A; 94.0 0.61 2.1E-05 45.3 13.0 140 207-352 164-324 (363)
122 3ngf_A AP endonuclease, family 93.9 0.45 1.5E-05 43.1 11.1 161 150-331 25-215 (269)
123 2r14_A Morphinone reductase; H 93.8 0.74 2.5E-05 45.1 13.1 140 208-352 173-327 (377)
124 1vyr_A Pentaerythritol tetrani 93.8 1.3 4.6E-05 42.9 14.9 117 237-354 76-272 (364)
125 4djd_D C/Fe-SP, corrinoid/iron 93.8 0.46 1.6E-05 45.9 11.4 142 149-317 81-236 (323)
126 1vyr_A Pentaerythritol tetrani 93.5 1.1 3.7E-05 43.6 13.7 140 208-352 168-322 (364)
127 2tps_A Protein (thiamin phosph 93.5 0.88 3E-05 40.2 12.1 155 150-353 33-200 (227)
128 2ekc_A AQ_1548, tryptophan syn 93.4 0.78 2.7E-05 42.5 12.0 92 245-350 5-126 (262)
129 2a5h_A L-lysine 2,3-aminomutas 93.3 5.3 0.00018 39.3 18.5 158 143-321 143-321 (416)
130 3iwp_A Copper homeostasis prot 93.2 1.4 4.9E-05 41.7 13.6 138 194-352 39-185 (287)
131 1ujp_A Tryptophan synthase alp 93.1 0.42 1.4E-05 44.7 9.6 171 146-351 28-227 (271)
132 3b0p_A TRNA-dihydrouridine syn 93.0 2 6.7E-05 41.5 14.6 136 207-352 76-224 (350)
133 1k77_A EC1530, hypothetical pr 92.9 0.85 2.9E-05 40.6 11.2 156 153-332 20-209 (260)
134 1icp_A OPR1, 12-oxophytodienoa 92.9 1.9 6.6E-05 42.0 14.5 117 237-354 86-277 (376)
135 3iv3_A Tagatose 1,6-diphosphat 92.7 2.6 8.8E-05 40.8 14.8 137 206-350 115-277 (332)
136 1z41_A YQJM, probable NADH-dep 92.7 1.3 4.6E-05 42.3 12.8 115 238-354 79-250 (338)
137 2r14_A Morphinone reductase; H 92.7 2.4 8.2E-05 41.4 14.8 116 238-354 81-276 (377)
138 2gou_A Oxidoreductase, FMN-bin 92.6 2.4 8.1E-05 41.2 14.6 117 237-354 76-271 (365)
139 3tsm_A IGPS, indole-3-glycerol 92.6 5.1 0.00017 37.5 16.3 157 149-350 80-246 (272)
140 3qxb_A Putative xylose isomera 92.5 1.4 4.9E-05 40.8 12.5 174 152-333 39-250 (316)
141 3gr7_A NADPH dehydrogenase; fl 92.5 1.3 4.3E-05 42.7 12.4 115 238-354 79-250 (340)
142 2pgf_A Adenosine deaminase; me 92.5 3.3 0.00011 40.0 15.5 136 206-353 120-262 (371)
143 3fa4_A 2,3-dimethylmalate lyas 92.5 5 0.00017 38.2 16.3 135 207-350 31-187 (302)
144 4ab4_A Xenobiotic reductase B; 92.5 1.7 5.8E-05 42.4 13.3 133 207-351 159-306 (362)
145 3iwp_A Copper homeostasis prot 92.5 3.7 0.00013 38.8 15.2 171 154-354 52-239 (287)
146 1thf_D HISF protein; thermophI 92.4 2.4 8.3E-05 38.0 13.6 178 148-351 30-222 (253)
147 3r2g_A Inosine 5'-monophosphat 92.4 0.85 2.9E-05 44.6 11.1 71 277-354 99-170 (361)
148 3pao_A Adenosine deaminase; st 92.4 2.3 7.9E-05 40.7 14.0 134 207-353 84-221 (326)
149 3eoo_A Methylisocitrate lyase; 92.3 3.3 0.00011 39.3 14.9 133 208-350 36-188 (298)
150 3gka_A N-ethylmaleimide reduct 92.3 1.5 5E-05 42.8 12.6 132 208-351 168-314 (361)
151 1xi3_A Thiamine phosphate pyro 92.2 4.4 0.00015 35.2 14.7 156 149-353 27-190 (215)
152 3b4u_A Dihydrodipicolinate syn 92.2 2 6.7E-05 40.4 13.1 120 207-341 30-158 (294)
153 3lgd_A Adenosine deaminase CEC 92.2 0.82 2.8E-05 46.7 11.1 141 207-354 206-360 (508)
154 3dz1_A Dihydrodipicolinate syn 92.2 1.9 6.6E-05 40.9 13.1 118 207-340 35-158 (313)
155 3kws_A Putative sugar isomeras 92.1 4 0.00014 36.9 14.8 178 124-331 25-228 (287)
156 3iar_A Adenosine deaminase; pu 92.1 3.9 0.00013 39.8 15.4 110 234-354 120-237 (367)
157 1q7z_A 5-methyltetrahydrofolat 92.1 1.4 4.8E-05 45.5 12.8 188 130-350 322-535 (566)
158 3i65_A Dihydroorotate dehydrog 92.0 4.2 0.00014 40.4 15.7 80 274-356 280-377 (415)
159 3l21_A DHDPS, dihydrodipicolin 92.0 0.69 2.4E-05 43.9 9.6 81 272-352 31-116 (304)
160 3m5v_A DHDPS, dihydrodipicolin 91.9 3.4 0.00012 38.9 14.5 120 207-341 34-159 (301)
161 3kru_A NADH:flavin oxidoreduct 91.9 3.3 0.00011 39.9 14.5 138 207-351 149-305 (343)
162 2x7v_A Probable endonuclease 4 91.9 3.1 0.00011 37.3 13.7 168 152-332 16-220 (287)
163 2vp8_A Dihydropteroate synthas 91.9 0.48 1.6E-05 45.6 8.4 78 270-352 57-143 (318)
164 3fok_A Uncharacterized protein 91.8 0.67 2.3E-05 44.4 9.2 173 147-351 70-271 (307)
165 4fxs_A Inosine-5'-monophosphat 91.7 2.1 7.3E-05 43.3 13.5 131 149-298 231-364 (496)
166 1m5w_A Pyridoxal phosphate bio 91.6 0.63 2.1E-05 43.1 8.5 117 183-315 114-238 (243)
167 3tml_A 2-dehydro-3-deoxyphosph 91.5 1.1 3.8E-05 42.5 10.4 177 146-352 29-243 (288)
168 3flu_A DHDPS, dihydrodipicolin 91.5 5.1 0.00017 37.6 15.1 114 207-336 34-153 (297)
169 1ka9_F Imidazole glycerol phos 91.5 3.3 0.00011 37.2 13.3 178 148-351 31-223 (252)
170 2wkj_A N-acetylneuraminate lya 91.4 3.3 0.00011 39.0 13.7 119 207-340 38-162 (303)
171 3fs2_A 2-dehydro-3-deoxyphosph 91.4 1.1 3.8E-05 42.7 10.3 177 145-352 52-261 (298)
172 3dz1_A Dihydrodipicolinate syn 91.3 0.86 2.9E-05 43.4 9.6 81 272-352 24-108 (313)
173 3nav_A Tryptophan synthase alp 91.3 2.3 7.9E-05 39.8 12.3 100 243-350 6-129 (271)
174 3tva_A Xylose isomerase domain 91.3 1.8 6E-05 39.4 11.4 105 207-331 108-215 (290)
175 1o60_A 2-dehydro-3-deoxyphosph 91.3 3.5 0.00012 39.0 13.7 182 145-354 29-242 (292)
176 3flu_A DHDPS, dihydrodipicolin 91.2 0.97 3.3E-05 42.6 9.8 81 272-352 23-108 (297)
177 3gg8_A Pyruvate kinase; malari 91.2 4.9 0.00017 41.0 15.4 160 144-318 204-369 (511)
178 3qze_A DHDPS, dihydrodipicolin 91.1 4.7 0.00016 38.3 14.5 118 207-340 50-173 (314)
179 3lye_A Oxaloacetate acetyl hyd 91.1 9.5 0.00033 36.3 16.5 159 183-350 14-195 (307)
180 3tak_A DHDPS, dihydrodipicolin 91.1 0.78 2.7E-05 43.1 8.9 81 272-352 17-102 (291)
181 3gk0_A PNP synthase, pyridoxin 91.0 0.7 2.4E-05 43.5 8.3 121 181-317 140-268 (278)
182 1aj0_A DHPS, dihydropteroate s 91.0 0.84 2.9E-05 43.1 9.0 77 270-352 30-116 (282)
183 1zlp_A PSR132, petal death pro 91.0 2.5 8.6E-05 40.6 12.4 135 207-350 52-206 (318)
184 1rd5_A Tryptophan synthase alp 91.0 1.4 4.8E-05 40.3 10.4 95 245-352 6-124 (262)
185 3ngj_A Deoxyribose-phosphate a 90.8 4 0.00014 37.6 13.2 126 207-357 49-181 (239)
186 1xg4_A Probable methylisocitra 90.8 1.4 4.9E-05 41.8 10.5 146 196-350 18-184 (295)
187 3tak_A DHDPS, dihydrodipicolin 90.8 5 0.00017 37.5 14.3 114 207-336 28-147 (291)
188 2w6r_A Imidazole glycerol phos 90.8 4.1 0.00014 36.9 13.3 181 149-352 31-228 (266)
189 4gxw_A Adenosine deaminase; am 90.8 13 0.00044 36.3 17.8 136 208-354 103-243 (380)
190 1ps9_A 2,4-dienoyl-COA reducta 90.8 4.3 0.00015 42.1 15.1 139 207-352 147-309 (671)
191 3qtg_A Pyruvate kinase, PK; TI 90.7 7.5 0.00026 39.1 16.0 190 144-348 178-376 (461)
192 1xky_A Dihydrodipicolinate syn 90.7 6 0.0002 37.2 14.7 104 207-326 39-143 (301)
193 2hsa_B 12-oxophytodienoate red 90.6 6.4 0.00022 38.7 15.4 140 208-352 178-347 (402)
194 3hqn_D Pyruvate kinase, PK; TI 90.6 8.7 0.0003 39.1 16.6 158 145-318 190-353 (499)
195 3aty_A Tcoye, prostaglandin F2 90.6 3.5 0.00012 40.3 13.4 137 207-352 180-335 (379)
196 2z6i_A Trans-2-enoyl-ACP reduc 90.5 4.7 0.00016 38.3 14.0 158 151-355 26-193 (332)
197 3khd_A Pyruvate kinase; malari 90.5 4.2 0.00014 41.6 14.2 160 144-318 213-378 (520)
198 1ypf_A GMP reductase; GUAC, pu 90.5 1.6 5.5E-05 41.7 10.7 91 246-353 85-177 (336)
199 1eye_A DHPS 1, dihydropteroate 90.4 2 6.9E-05 40.4 11.1 76 270-352 21-106 (280)
200 3oa3_A Aldolase; structural ge 90.4 4.3 0.00015 38.4 13.3 125 208-357 81-212 (288)
201 3o6c_A PNP synthase, pyridoxin 90.4 1.2 4E-05 41.6 9.1 67 193-259 123-210 (260)
202 3fkr_A L-2-keto-3-deoxyarabona 90.4 0.85 2.9E-05 43.3 8.6 81 272-352 24-109 (309)
203 2ehh_A DHDPS, dihydrodipicolin 90.4 6.5 0.00022 36.7 14.7 118 207-340 27-150 (294)
204 3m5v_A DHDPS, dihydrodipicolin 90.4 0.89 3E-05 43.0 8.6 81 272-352 23-109 (301)
205 3na8_A Putative dihydrodipicol 90.3 4.2 0.00014 38.6 13.4 118 207-340 51-174 (315)
206 2fiq_A Putative tagatose 6-pho 90.3 2.2 7.5E-05 42.5 11.7 142 205-352 108-280 (420)
207 3o1n_A 3-dehydroquinate dehydr 90.2 12 0.0004 35.0 19.6 197 125-351 26-249 (276)
208 3ffs_A Inosine-5-monophosphate 90.2 2.2 7.7E-05 42.1 11.7 125 151-297 146-275 (400)
209 1tx2_A DHPS, dihydropteroate s 90.1 1.1 3.9E-05 42.5 9.1 77 270-352 55-141 (297)
210 2ze3_A DFA0005; organic waste 90.1 2 6.9E-05 40.3 10.7 135 207-350 29-185 (275)
211 4avf_A Inosine-5'-monophosphat 90.0 4.5 0.00015 40.8 14.0 130 148-298 228-362 (490)
212 3s5o_A 4-hydroxy-2-oxoglutarat 89.9 1.3 4.4E-05 42.0 9.3 81 272-352 30-115 (307)
213 3qc0_A Sugar isomerase; TIM ba 89.9 1 3.4E-05 40.4 8.2 167 152-331 22-208 (275)
214 2yxg_A DHDPS, dihydrodipicolin 89.8 6.7 0.00023 36.6 14.2 118 207-340 27-150 (289)
215 1e0t_A Pyruvate kinase, PK; ph 89.8 13 0.00045 37.5 17.0 160 144-318 169-334 (470)
216 2r91_A 2-keto-3-deoxy-(6-phosp 89.8 5.4 0.00018 37.2 13.5 101 207-326 25-127 (286)
217 3fkr_A L-2-keto-3-deoxyarabona 89.6 6.5 0.00022 37.1 14.0 99 207-320 35-137 (309)
218 3l21_A DHDPS, dihydrodipicolin 89.5 6.3 0.00022 37.1 13.9 119 207-341 42-166 (304)
219 3mcm_A 2-amino-4-hydroxy-6-hyd 89.5 3.2 0.00011 41.6 12.2 196 127-351 194-438 (442)
220 4dpp_A DHDPS 2, dihydrodipicol 89.4 1.6 5.5E-05 42.6 9.8 81 272-352 75-160 (360)
221 3hgj_A Chromate reductase; TIM 89.4 2.7 9.3E-05 40.4 11.4 116 238-354 77-260 (349)
222 4fo4_A Inosine 5'-monophosphat 89.4 7.3 0.00025 37.9 14.5 126 150-297 109-240 (366)
223 2ojp_A DHDPS, dihydrodipicolin 89.4 5.8 0.0002 37.1 13.4 118 207-340 28-151 (292)
224 3si9_A DHDPS, dihydrodipicolin 89.2 7.1 0.00024 37.0 14.0 118 207-340 49-172 (315)
225 3cpr_A Dihydrodipicolinate syn 89.2 9.8 0.00034 35.8 15.0 114 207-336 43-162 (304)
226 2r8w_A AGR_C_1641P; APC7498, d 89.1 6.7 0.00023 37.5 13.9 104 207-326 61-165 (332)
227 2nuw_A 2-keto-3-deoxygluconate 89.1 1.4 4.8E-05 41.3 8.9 80 272-352 15-97 (288)
228 3si9_A DHDPS, dihydrodipicolin 89.0 1.5 5.2E-05 41.7 9.2 81 272-352 38-123 (315)
229 4ab4_A Xenobiotic reductase B; 89.0 6.1 0.00021 38.4 13.6 117 237-354 74-263 (362)
230 1f6k_A N-acetylneuraminate lya 89.0 6.3 0.00021 36.9 13.3 104 207-326 30-135 (293)
231 3qfe_A Putative dihydrodipicol 89.0 1.1 3.9E-05 42.7 8.2 81 272-352 27-112 (318)
232 3usb_A Inosine-5'-monophosphat 88.9 4.9 0.00017 40.7 13.4 132 149-299 256-390 (511)
233 3b4u_A Dihydrodipicolinate syn 88.9 2.2 7.4E-05 40.1 10.1 81 272-352 19-104 (294)
234 1ps9_A 2,4-dienoyl-COA reducta 88.9 1.4 4.8E-05 45.8 9.6 115 239-354 78-249 (671)
235 3vnd_A TSA, tryptophan synthas 88.9 3.2 0.00011 38.7 11.1 100 243-350 4-127 (267)
236 1o5k_A DHDPS, dihydrodipicolin 88.9 6.7 0.00023 36.9 13.5 104 207-326 39-143 (306)
237 2r91_A 2-keto-3-deoxy-(6-phosp 88.8 1.6 5.6E-05 40.8 9.1 80 272-352 14-96 (286)
238 3dx5_A Uncharacterized protein 88.8 4.4 0.00015 36.5 11.9 166 152-333 19-204 (286)
239 2v9d_A YAGE; dihydrodipicolini 88.8 6.4 0.00022 37.9 13.5 104 207-326 58-162 (343)
240 4fo4_A Inosine 5'-monophosphat 88.8 1.6 5.4E-05 42.7 9.3 68 279-352 109-176 (366)
241 3daq_A DHDPS, dihydrodipicolin 88.8 7.5 0.00026 36.3 13.7 119 206-340 28-152 (292)
242 3qfe_A Putative dihydrodipicol 88.8 6.3 0.00022 37.4 13.3 104 207-326 38-144 (318)
243 3lye_A Oxaloacetate acetyl hyd 88.8 5.1 0.00017 38.2 12.6 184 153-352 37-246 (307)
244 1xky_A Dihydrodipicolinate syn 88.7 1.8 6E-05 40.9 9.3 81 272-352 28-113 (301)
245 4ef8_A Dihydroorotate dehydrog 88.7 18 0.00062 35.0 18.4 186 151-353 61-306 (354)
246 1w3i_A EDA, 2-keto-3-deoxy glu 88.6 1.5 5.1E-05 41.2 8.7 80 272-352 15-97 (293)
247 1gte_A Dihydropyrimidine dehyd 88.6 5.2 0.00018 43.9 14.2 79 274-353 645-735 (1025)
248 1gte_A Dihydropyrimidine dehyd 88.5 1.5 5.1E-05 48.2 9.8 135 207-354 654-817 (1025)
249 3b8i_A PA4872 oxaloacetate dec 88.4 4.9 0.00017 37.9 12.1 134 207-350 34-185 (287)
250 2xsa_A Ogoga, hyaluronoglucosa 88.4 3.3 0.00011 41.6 11.4 109 218-326 33-155 (447)
251 1viz_A PCRB protein homolog; s 88.4 12 0.00043 34.2 14.6 167 151-351 23-208 (240)
252 2vc6_A MOSA, dihydrodipicolina 88.3 6.9 0.00024 36.5 13.1 118 207-340 27-150 (292)
253 1icp_A OPR1, 12-oxophytodienoa 88.3 3.6 0.00012 40.1 11.5 141 207-352 173-329 (376)
254 2qiw_A PEP phosphonomutase; st 88.3 14 0.00046 34.2 14.9 184 151-352 30-235 (255)
255 3dx5_A Uncharacterized protein 88.3 11 0.00038 33.7 14.2 19 278-296 85-103 (286)
256 1eep_A Inosine 5'-monophosphat 88.3 2.1 7.3E-05 41.8 9.9 67 280-353 155-222 (404)
257 3tdn_A FLR symmetric alpha-bet 88.2 2 6.7E-05 38.9 9.0 71 149-221 36-108 (247)
258 3ayv_A Putative uncharacterize 88.2 1.6 5.6E-05 38.8 8.4 128 145-287 7-154 (254)
259 2wkj_A N-acetylneuraminate lya 88.2 2.2 7.5E-05 40.3 9.6 82 272-353 27-113 (303)
260 3cpr_A Dihydrodipicolinate syn 88.1 2.2 7.6E-05 40.3 9.6 82 272-353 32-118 (304)
261 2r8w_A AGR_C_1641P; APC7498, d 88.1 1.8 6.2E-05 41.5 9.1 81 272-352 50-135 (332)
262 3gr4_A Pyruvate kinase isozyme 88.0 11 0.00037 38.8 15.2 158 145-318 240-403 (550)
263 3gka_A N-ethylmaleimide reduct 88.0 7 0.00024 37.9 13.3 117 237-354 82-271 (361)
264 3b0p_A TRNA-dihydrouridine syn 88.0 2.9 0.0001 40.2 10.6 92 252-353 54-164 (350)
265 1nvm_A HOA, 4-hydroxy-2-oxoval 88.0 2.2 7.5E-05 41.0 9.6 80 273-353 26-113 (345)
266 3l23_A Sugar phosphate isomera 88.0 8.5 0.00029 35.5 13.5 114 205-330 33-168 (303)
267 3e96_A Dihydrodipicolinate syn 87.9 1.2 4.1E-05 42.4 7.6 81 272-352 28-112 (316)
268 3qze_A DHDPS, dihydrodipicolin 87.9 1.6 5.6E-05 41.5 8.6 81 272-352 39-124 (314)
269 3khj_A Inosine-5-monophosphate 87.9 7 0.00024 37.9 13.2 67 280-353 107-173 (361)
270 1jub_A Dihydroorotate dehydrog 87.8 7.5 0.00026 36.2 13.1 79 274-353 103-192 (311)
271 3q58_A N-acetylmannosamine-6-p 87.8 1.4 4.8E-05 40.0 7.7 62 282-351 93-154 (229)
272 3d0c_A Dihydrodipicolinate syn 87.8 2 6.9E-05 40.8 9.1 81 272-352 28-112 (314)
273 3ixl_A Amdase, arylmalonate de 87.7 5.1 0.00018 36.4 11.5 131 151-301 56-191 (240)
274 3a5f_A Dihydrodipicolinate syn 87.7 5.1 0.00017 37.4 11.8 104 207-326 28-132 (291)
275 2hsa_B 12-oxophytodienoate red 87.7 9.4 0.00032 37.5 14.2 117 237-354 88-287 (402)
276 3daq_A DHDPS, dihydrodipicolin 87.6 1.8 6.1E-05 40.7 8.6 80 273-352 19-103 (292)
277 3h5d_A DHDPS, dihydrodipicolin 87.6 1.8 6E-05 41.2 8.6 81 272-352 23-109 (311)
278 1u83_A Phosphosulfolactate syn 87.6 0.47 1.6E-05 44.7 4.4 126 205-350 53-189 (276)
279 2qul_A D-tagatose 3-epimerase; 87.6 12 0.00041 33.4 14.0 18 240-257 86-103 (290)
280 2hjp_A Phosphonopyruvate hydro 87.6 4.4 0.00015 38.3 11.2 144 197-350 17-183 (290)
281 2ehh_A DHDPS, dihydrodipicolin 87.6 1.6 5.6E-05 40.9 8.3 82 272-353 16-102 (294)
282 2nuw_A 2-keto-3-deoxygluconate 87.5 5.5 0.00019 37.2 11.9 101 207-326 26-128 (288)
283 3zwt_A Dihydroorotate dehydrog 87.5 4.9 0.00017 39.1 11.8 106 239-355 199-329 (367)
284 3s5o_A 4-hydroxy-2-oxoglutarat 87.4 5.7 0.00019 37.5 12.0 104 207-326 41-147 (307)
285 1ur4_A Galactanase; hydrolase, 87.4 13 0.00043 36.7 14.9 124 206-334 53-209 (399)
286 2qiw_A PEP phosphonomutase; st 87.4 2.1 7.3E-05 39.7 8.8 131 208-350 34-185 (255)
287 1vli_A Spore coat polysacchari 87.3 8.9 0.0003 37.7 13.6 135 154-319 127-280 (385)
288 3d0c_A Dihydrodipicolinate syn 87.3 6.7 0.00023 37.2 12.5 103 207-326 39-142 (314)
289 2qul_A D-tagatose 3-epimerase; 87.3 2 7E-05 38.7 8.6 169 151-332 20-216 (290)
290 3l5l_A Xenobiotic reductase A; 87.3 3.1 0.00011 40.3 10.3 117 237-354 75-267 (363)
291 3na8_A Putative dihydrodipicol 87.3 1.9 6.4E-05 41.1 8.6 81 272-352 40-125 (315)
292 3noy_A 4-hydroxy-3-methylbut-2 87.3 1.6 5.4E-05 42.7 8.0 68 273-350 42-109 (366)
293 3n2b_A Diaminopimelate decarbo 87.2 4.6 0.00016 40.0 11.7 57 151-220 90-149 (441)
294 1w3i_A EDA, 2-keto-3-deoxy glu 87.2 5.9 0.0002 37.1 11.9 101 207-326 26-128 (293)
295 3khj_A Inosine-5-monophosphate 87.2 7.5 0.00026 37.6 13.0 125 151-297 107-236 (361)
296 3a5f_A Dihydrodipicolinate syn 87.1 2 6.9E-05 40.2 8.6 80 272-352 18-102 (291)
297 2v9d_A YAGE; dihydrodipicolini 87.0 2.3 7.8E-05 41.0 9.1 82 272-353 47-133 (343)
298 3r12_A Deoxyribose-phosphate a 87.0 3.3 0.00011 38.6 9.8 126 207-357 65-197 (260)
299 3eb2_A Putative dihydrodipicol 86.9 4.8 0.00016 37.9 11.1 104 207-326 31-135 (300)
300 2rfg_A Dihydrodipicolinate syn 86.9 8.1 0.00028 36.2 12.7 104 207-326 27-131 (297)
301 2yxg_A DHDPS, dihydrodipicolin 86.8 1.9 6.7E-05 40.3 8.3 82 271-352 15-101 (289)
302 1vrd_A Inosine-5'-monophosphat 86.8 1.6 5.6E-05 43.7 8.2 71 278-354 237-307 (494)
303 3fa4_A 2,3-dimethylmalate lyas 86.8 7.2 0.00025 37.1 12.3 155 152-316 29-206 (302)
304 3bo9_A Putative nitroalkan dio 86.8 20 0.00069 33.8 15.6 113 205-356 93-208 (326)
305 2c6q_A GMP reductase 2; TIM ba 86.8 1.9 6.4E-05 41.8 8.4 68 281-354 121-190 (351)
306 2e28_A Pyruvate kinase, PK; al 86.8 12 0.00043 38.6 15.0 192 144-350 170-377 (587)
307 2p10_A MLL9387 protein; putati 86.7 8.6 0.00029 36.3 12.5 156 152-317 112-280 (286)
308 4ay7_A Methylcobalamin\: coenz 86.7 2.3 7.7E-05 40.6 8.9 71 278-352 191-268 (348)
309 2ojp_A DHDPS, dihydrodipicolin 86.7 1.5 5E-05 41.3 7.3 81 272-352 17-102 (292)
310 3igs_A N-acetylmannosamine-6-p 86.6 1.8 6.2E-05 39.4 7.7 62 282-351 93-154 (232)
311 4e38_A Keto-hydroxyglutarate-a 86.5 2.9 0.0001 38.3 9.1 70 274-352 43-112 (232)
312 1qop_A Tryptophan synthase alp 86.5 5.6 0.00019 36.6 11.2 100 244-350 4-126 (268)
313 2eja_A URO-D, UPD, uroporphyri 86.5 2.3 7.7E-05 40.4 8.7 69 278-352 180-258 (338)
314 3w01_A Heptaprenylglyceryl pho 86.4 16 0.00054 33.5 14.0 166 153-352 28-213 (235)
315 1mxs_A KDPG aldolase; 2-keto-3 86.4 2.8 9.7E-05 38.0 8.9 70 274-352 35-104 (225)
316 2f6u_A GGGPS, (S)-3-O-geranylg 86.4 8.7 0.0003 35.1 12.2 172 151-351 23-216 (234)
317 3u0h_A Xylose isomerase domain 86.4 3.3 0.00011 37.0 9.4 170 151-333 19-211 (281)
318 1f6k_A N-acetylneuraminate lya 86.3 2.6 8.7E-05 39.6 8.9 82 272-353 19-106 (293)
319 3l5a_A NADH/flavin oxidoreduct 86.3 4 0.00014 40.5 10.6 138 208-351 177-344 (419)
320 3tva_A Xylose isomerase domain 86.3 7.6 0.00026 35.0 11.9 113 205-331 25-162 (290)
321 1qo2_A Molecule: N-((5-phospho 86.2 3.3 0.00011 37.1 9.2 174 148-350 30-220 (241)
322 3gnh_A L-lysine, L-arginine ca 86.2 2.3 7.7E-05 40.2 8.5 71 274-351 164-245 (403)
323 3vni_A Xylose isomerase domain 86.1 15 0.00053 32.9 13.9 18 278-295 89-106 (294)
324 3e96_A Dihydrodipicolinate syn 86.0 12 0.0004 35.5 13.4 113 207-336 39-153 (316)
325 1yx1_A Hypothetical protein PA 86.0 18 0.0006 32.2 14.1 154 151-331 26-193 (264)
326 3eoo_A Methylisocitrate lyase; 85.8 15 0.00052 34.7 13.9 186 154-353 35-239 (298)
327 2h9a_A Carbon monoxide dehydro 85.7 4.7 0.00016 40.4 10.8 169 145-351 102-291 (445)
328 1i60_A IOLI protein; beta barr 85.6 15 0.00052 32.4 13.4 124 152-286 18-164 (278)
329 1wa3_A 2-keto-3-deoxy-6-phosph 85.6 2.4 8.2E-05 36.9 7.8 68 274-350 19-87 (205)
330 2qgh_A Diaminopimelate decarbo 85.5 28 0.00096 33.8 16.4 134 150-315 70-223 (425)
331 1y0e_A Putative N-acetylmannos 85.4 2.7 9.1E-05 37.1 8.1 66 282-353 80-146 (223)
332 2yx0_A Radical SAM enzyme; pre 85.4 24 0.00082 33.0 21.8 153 162-325 142-312 (342)
333 3vni_A Xylose isomerase domain 85.4 6.8 0.00023 35.4 11.0 167 150-332 19-215 (294)
334 3lmz_A Putative sugar isomeras 85.4 19 0.00064 31.9 13.9 102 205-330 34-135 (257)
335 3kws_A Putative sugar isomeras 85.3 9.4 0.00032 34.4 12.0 111 205-332 42-170 (287)
336 1qwg_A PSL synthase;, (2R)-pho 85.3 0.65 2.2E-05 43.2 4.0 128 205-350 26-165 (251)
337 1zco_A 2-dehydro-3-deoxyphosph 85.3 11 0.00037 34.9 12.5 57 255-318 192-258 (262)
338 3eb2_A Putative dihydrodipicol 85.3 1.4 4.8E-05 41.6 6.4 81 272-352 20-105 (300)
339 1ceo_A Cellulase CELC; glycosy 85.2 7.5 0.00026 36.3 11.6 62 203-264 30-91 (343)
340 3t05_A Pyruvate kinase, PK; te 85.2 23 0.00078 36.8 16.0 158 144-317 190-353 (606)
341 3h5d_A DHDPS, dihydrodipicolin 85.1 14 0.00047 34.9 13.4 118 207-340 34-158 (311)
342 1o5k_A DHDPS, dihydrodipicolin 85.0 2.1 7.3E-05 40.5 7.6 82 271-352 27-113 (306)
343 2vc6_A MOSA, dihydrodipicolina 85.0 1.8 6E-05 40.7 7.0 81 272-352 16-101 (292)
344 2b7n_A Probable nicotinate-nuc 85.0 4.4 0.00015 37.8 9.7 61 285-353 197-257 (273)
345 3lab_A Putative KDPG (2-keto-3 84.9 2.6 9E-05 38.3 7.8 68 274-350 22-89 (217)
346 3mz2_A Glycerophosphoryl diest 84.7 25 0.00087 32.7 15.1 129 151-316 145-279 (292)
347 1xm3_A Thiazole biosynthesis p 84.7 4.9 0.00017 37.0 9.8 165 154-352 29-206 (264)
348 1r3s_A URO-D, uroporphyrinogen 84.6 2.2 7.7E-05 41.0 7.7 70 279-352 199-282 (367)
349 2rfg_A Dihydrodipicolinate syn 84.6 1.8 6.2E-05 40.8 6.9 81 272-352 16-101 (297)
350 1fob_A Beta-1,4-galactanase; B 84.6 12 0.0004 35.6 12.7 118 205-330 31-182 (334)
351 4drs_A Pyruvate kinase; glycol 84.5 12 0.00042 38.2 13.4 192 144-350 212-428 (526)
352 3ih1_A Methylisocitrate lyase; 84.4 9.1 0.00031 36.4 11.7 182 153-353 41-243 (305)
353 3kru_A NADH:flavin oxidoreduct 84.3 7.6 0.00026 37.4 11.3 115 237-353 76-249 (343)
354 3eol_A Isocitrate lyase; seatt 84.3 24 0.00082 35.2 15.1 146 206-354 165-348 (433)
355 1qwg_A PSL synthase;, (2R)-pho 84.1 1.8 6.3E-05 40.2 6.5 147 145-313 23-195 (251)
356 4ay7_A Methylcobalamin\: coenz 83.9 29 0.001 32.7 15.8 147 147-318 189-346 (348)
357 2xed_A Putative maleate isomer 83.9 4.8 0.00017 37.3 9.4 149 126-300 54-218 (273)
358 2q02_A Putative cytoplasmic pr 83.9 5.6 0.00019 35.3 9.6 17 241-257 84-100 (272)
359 3ndo_A Deoxyribose-phosphate a 83.8 15 0.00051 33.5 12.5 91 265-357 69-170 (231)
360 3vzx_A Heptaprenylglyceryl pho 83.8 20 0.00067 32.7 13.2 166 153-352 23-207 (228)
361 3iix_A Biotin synthetase, puta 83.6 14 0.00049 34.4 12.8 76 274-354 84-160 (348)
362 2qkf_A 3-deoxy-D-manno-octulos 83.4 11 0.00039 35.2 11.8 180 146-353 27-238 (280)
363 1thf_D HISF protein; thermophI 83.2 5.6 0.00019 35.6 9.4 71 278-352 31-102 (253)
364 2yxb_A Coenzyme B12-dependent 83.2 14 0.00047 31.4 11.4 96 149-299 34-130 (161)
365 1bxb_A Xylose isomerase; xylos 83.2 4.8 0.00016 38.8 9.5 177 151-333 36-250 (387)
366 1yxy_A Putative N-acetylmannos 83.0 4 0.00014 36.3 8.3 65 281-351 92-158 (234)
367 3p6l_A Sugar phosphate isomera 83.0 24 0.00083 31.1 15.1 128 205-350 26-159 (262)
368 4af0_A Inosine-5'-monophosphat 82.9 19 0.00065 37.0 14.0 128 149-298 281-414 (556)
369 4eiv_A Deoxyribose-phosphate a 82.9 2.5 8.5E-05 40.2 7.0 94 263-357 87-190 (297)
370 3l23_A Sugar phosphate isomera 82.9 11 0.00038 34.7 11.6 120 125-259 13-163 (303)
371 2jbm_A Nicotinate-nucleotide p 82.8 3.8 0.00013 38.8 8.3 62 284-353 211-272 (299)
372 1jcn_A Inosine monophosphate d 82.7 4.1 0.00014 41.0 9.1 70 279-354 256-325 (514)
373 2qw5_A Xylose isomerase-like T 82.7 23 0.00078 32.7 13.7 80 206-295 36-127 (335)
374 4avf_A Inosine-5'-monophosphat 82.6 3.9 0.00013 41.3 8.8 68 279-352 230-297 (490)
375 3oix_A Putative dihydroorotate 82.4 17 0.00057 35.0 12.9 102 237-351 112-222 (345)
376 1vc4_A Indole-3-glycerol phosp 82.3 19 0.00063 33.0 12.6 162 148-350 65-233 (254)
377 2bdq_A Copper homeostasis prot 82.3 19 0.00066 32.7 12.5 161 159-353 19-207 (224)
378 1yad_A Regulatory protein TENI 82.3 18 0.00063 31.6 12.3 114 195-352 17-136 (221)
379 2vef_A Dihydropteroate synthas 82.2 4.2 0.00014 38.8 8.4 76 270-351 25-110 (314)
380 1hjs_A Beta-1,4-galactanase; 4 82.2 8.8 0.0003 36.5 10.8 117 206-330 32-181 (332)
381 3o63_A Probable thiamine-phosp 82.2 11 0.00037 34.5 10.9 114 205-353 47-162 (243)
382 1ccw_A Protein (glutamate muta 82.1 11 0.00037 31.1 10.0 100 150-298 20-120 (137)
383 2wqp_A Polysialic acid capsule 82.1 8.7 0.0003 37.3 10.7 39 280-318 219-267 (349)
384 1s2w_A Phosphoenolpyruvate pho 82.0 17 0.00056 34.4 12.4 134 207-350 32-187 (295)
385 3n9r_A Fructose-bisphosphate a 82.0 3.6 0.00012 39.3 7.8 94 244-349 5-100 (307)
386 2r8c_A Putative amidohydrolase 82.0 4.6 0.00016 38.6 8.8 71 274-351 172-253 (426)
387 3b8i_A PA4872 oxaloacetate dec 81.8 26 0.00091 32.9 13.7 183 152-352 32-233 (287)
388 3m0z_A Putative aldolase; MCSG 81.8 4.1 0.00014 37.4 7.7 150 143-319 46-248 (249)
389 1ydn_A Hydroxymethylglutaryl-C 81.7 3.2 0.00011 38.7 7.3 74 274-354 23-100 (295)
390 1vhc_A Putative KHG/KDPG aldol 81.7 4.8 0.00016 36.4 8.2 70 274-352 26-95 (224)
391 3aty_A Tcoye, prostaglandin F2 81.7 3.2 0.00011 40.6 7.5 25 145-169 38-63 (379)
392 3zwt_A Dihydroorotate dehydrog 81.7 27 0.00093 33.8 14.2 96 253-353 144-254 (367)
393 2y88_A Phosphoribosyl isomeras 81.5 2 6.9E-05 38.4 5.6 70 278-352 32-102 (244)
394 4fxs_A Inosine-5'-monophosphat 81.4 3.2 0.00011 42.0 7.6 68 280-353 233-300 (496)
395 3i4e_A Isocitrate lyase; struc 81.4 14 0.00049 36.9 12.1 145 207-354 173-353 (439)
396 1f76_A Dihydroorotate dehydrog 81.2 36 0.0012 31.9 21.2 77 274-353 222-318 (336)
397 4dpp_A DHDPS 2, dihydrodipicol 81.0 17 0.00059 35.3 12.4 99 207-320 86-185 (360)
398 1zlp_A PSR132, petal death pro 81.0 39 0.0013 32.2 15.2 183 154-353 52-257 (318)
399 2g0w_A LMO2234 protein; putati 80.9 20 0.00069 32.5 12.5 139 121-286 19-174 (296)
400 1h5y_A HISF; histidine biosynt 80.9 7.7 0.00026 34.1 9.3 72 278-353 34-106 (253)
401 2zds_A Putative DNA-binding pr 80.8 34 0.0011 31.3 14.2 75 207-286 117-199 (340)
402 1o66_A 3-methyl-2-oxobutanoate 80.8 37 0.0013 31.8 14.8 137 194-350 16-178 (275)
403 3m6y_A 4-hydroxy-2-oxoglutarat 80.8 3.9 0.00013 38.0 7.2 155 143-320 68-272 (275)
404 3m47_A Orotidine 5'-phosphate 80.7 8.3 0.00029 34.8 9.5 166 145-350 22-199 (228)
405 1j93_A UROD, uroporphyrinogen 80.5 7.9 0.00027 36.7 9.8 142 150-317 195-350 (353)
406 3bw2_A 2-nitropropane dioxygen 80.4 27 0.00091 33.4 13.6 112 205-354 113-238 (369)
407 2inf_A URO-D, UPD, uroporphyri 80.4 5.8 0.0002 37.9 8.8 70 279-352 195-271 (359)
408 1xg4_A Probable methylisocitra 80.0 40 0.0014 31.7 14.3 185 154-353 30-235 (295)
409 1wbh_A KHG/KDPG aldolase; lyas 80.0 4.5 0.00015 36.3 7.4 70 274-352 25-94 (214)
410 2a4a_A Deoxyribose-phosphate a 79.9 2.5 8.7E-05 39.8 5.9 94 263-357 93-196 (281)
411 1i60_A IOLI protein; beta barr 79.9 6 0.00021 35.1 8.3 20 277-296 84-103 (278)
412 3l5a_A NADH/flavin oxidoreduct 79.8 11 0.00037 37.3 10.7 77 278-354 171-286 (419)
413 2bmb_A Folic acid synthesis pr 79.7 58 0.002 33.4 19.4 89 127-220 228-337 (545)
414 2z2u_A UPF0026 protein MJ0257; 79.6 37 0.0013 31.1 16.2 155 162-331 128-296 (311)
415 1o94_A Tmadh, trimethylamine d 79.6 30 0.001 36.2 14.7 117 238-355 80-259 (729)
416 2x7v_A Probable endonuclease 4 79.5 23 0.00078 31.5 12.1 119 205-332 16-149 (287)
417 1vzw_A Phosphoribosyl isomeras 79.5 2.2 7.5E-05 38.3 5.2 69 278-352 33-103 (244)
418 1n7k_A Deoxyribose-phosphate a 79.4 11 0.00038 34.4 9.9 96 255-357 71-172 (234)
419 1vcv_A Probable deoxyribose-ph 79.4 20 0.00069 32.5 11.6 93 262-357 53-152 (226)
420 3tr9_A Dihydropteroate synthas 79.4 9.5 0.00033 36.5 9.8 73 274-352 46-131 (314)
421 1gvf_A Tagatose-bisphosphate a 79.3 8.9 0.00031 36.1 9.5 93 244-349 6-100 (286)
422 3c8f_A Pyruvate formate-lyase 79.3 30 0.001 29.8 14.1 136 145-296 50-198 (245)
423 2y5s_A DHPS, dihydropteroate s 79.1 5.8 0.0002 37.5 8.1 78 270-352 38-123 (294)
424 3ble_A Citramalate synthase fr 79.1 5.6 0.00019 38.1 8.2 74 273-354 37-117 (337)
425 1lt8_A Betaine-homocysteine me 79.0 19 0.00063 35.6 12.1 161 146-328 52-248 (406)
426 2isw_A Putative fructose-1,6-b 79.0 9.1 0.00031 36.8 9.5 95 244-350 6-102 (323)
427 3usb_A Inosine-5'-monophosphat 79.0 6.6 0.00023 39.8 9.1 68 279-352 257-324 (511)
428 2e6f_A Dihydroorotate dehydrog 79.0 11 0.00036 35.2 10.0 79 274-353 103-195 (314)
429 3civ_A Endo-beta-1,4-mannanase 78.9 24 0.00083 33.7 12.7 88 241-329 96-205 (343)
430 2h6r_A Triosephosphate isomera 78.7 34 0.0012 30.3 12.9 113 207-350 75-196 (219)
431 1eep_A Inosine 5'-monophosphat 78.6 50 0.0017 31.9 15.8 126 150-297 154-285 (404)
432 3q94_A Fructose-bisphosphate a 78.6 7.1 0.00024 36.9 8.5 93 245-350 10-107 (288)
433 2yr1_A 3-dehydroquinate dehydr 78.5 40 0.0014 30.8 15.2 134 205-355 36-178 (257)
434 1a3w_A Pyruvate kinase; allost 78.5 35 0.0012 34.6 14.1 157 144-319 190-355 (500)
435 3feq_A Putative amidohydrolase 78.3 7 0.00024 37.0 8.6 73 274-353 169-252 (423)
436 3obe_A Sugar phosphate isomera 78.3 23 0.00079 32.6 12.0 101 152-258 40-166 (305)
437 2hk0_A D-psicose 3-epimerase; 78.1 16 0.00053 33.4 10.7 179 154-344 42-253 (309)
438 3k30_A Histamine dehydrogenase 78.0 17 0.00057 37.8 12.1 138 207-351 162-322 (690)
439 1xi3_A Thiamine phosphate pyro 78.0 32 0.0011 29.5 15.1 105 205-352 30-134 (215)
440 2inf_A URO-D, UPD, uroporphyri 77.9 18 0.00061 34.4 11.4 136 150-318 195-349 (359)
441 3t7v_A Methylornithine synthas 77.7 17 0.00057 34.2 11.1 73 274-353 91-169 (350)
442 3cqj_A L-ribulose-5-phosphate 77.6 39 0.0013 30.3 13.3 120 206-331 35-170 (295)
443 1vhn_A Putative flavin oxidore 77.6 26 0.00089 32.8 12.3 91 252-353 55-160 (318)
444 2hmc_A AGR_L_411P, dihydrodipi 77.4 38 0.0013 32.4 13.6 103 207-327 53-157 (344)
445 1mzh_A Deoxyribose-phosphate a 77.4 15 0.00052 32.8 10.2 86 267-354 61-153 (225)
446 3gk0_A PNP synthase, pyridoxin 77.4 31 0.0011 32.4 12.3 128 149-296 54-182 (278)
447 1r3s_A URO-D, uroporphyrinogen 77.3 24 0.00083 33.6 12.2 143 150-318 199-360 (367)
448 1f76_A Dihydroorotate dehydrog 77.3 25 0.00086 33.0 12.2 77 276-353 152-245 (336)
449 2hjp_A Phosphonopyruvate hydro 77.3 31 0.0011 32.4 12.6 161 153-320 27-207 (290)
450 3ozy_A Putative mandelate race 77.0 15 0.00051 35.6 10.7 77 273-352 149-228 (389)
451 4a3u_A NCR, NADH\:flavin oxido 76.8 15 0.00052 35.3 10.6 140 207-351 158-313 (358)
452 2hk0_A D-psicose 3-epimerase; 76.7 44 0.0015 30.3 14.6 111 207-331 42-174 (309)
453 1xim_A D-xylose isomerase; iso 76.7 23 0.00079 34.0 11.9 122 205-331 37-184 (393)
454 1s2w_A Phosphoenolpyruvate pho 76.7 14 0.00048 34.8 10.1 188 153-353 31-238 (295)
455 2nx9_A Oxaloacetate decarboxyl 76.6 65 0.0022 32.2 16.7 134 207-356 36-181 (464)
456 3qll_A Citrate lyase; beta bar 76.6 26 0.0009 33.1 12.1 123 179-315 138-268 (316)
457 3p6l_A Sugar phosphate isomera 76.6 23 0.00079 31.3 11.1 153 150-332 24-195 (262)
458 1m5w_A Pyridoxal phosphate bio 76.5 33 0.0011 31.6 12.1 128 149-296 26-154 (243)
459 3ktc_A Xylose isomerase; putat 76.3 11 0.00039 35.0 9.3 172 145-333 33-236 (333)
460 1yx1_A Hypothetical protein PA 76.3 9.6 0.00033 34.0 8.5 51 277-331 84-135 (264)
461 3inp_A D-ribulose-phosphate 3- 76.0 3.2 0.00011 38.3 5.2 75 274-352 37-115 (246)
462 1sfl_A 3-dehydroquinate dehydr 75.9 45 0.0015 30.1 16.5 141 148-317 17-180 (238)
463 2tps_A Protein (thiamin phosph 75.7 37 0.0013 29.4 12.1 115 195-352 18-142 (227)
464 1o94_A Tmadh, trimethylamine d 75.7 20 0.00067 37.6 11.9 139 207-351 155-319 (729)
465 2p0o_A Hypothetical protein DU 75.6 20 0.00069 35.0 11.1 88 207-311 23-110 (372)
466 1f6y_A 5-methyltetrahydrofolat 75.5 9.5 0.00032 35.3 8.4 71 275-351 23-96 (262)
467 3vk5_A MOEO5; TIM barrel, tran 75.4 22 0.00074 33.6 10.8 54 273-329 49-104 (286)
468 3ovp_A Ribulose-phosphate 3-ep 75.4 2.4 8.1E-05 38.5 4.1 75 274-352 14-93 (228)
469 2eja_A URO-D, UPD, uroporphyri 75.4 15 0.00052 34.5 10.0 143 149-317 180-334 (338)
470 3k30_A Histamine dehydrogenase 75.3 16 0.00055 37.9 11.0 115 239-354 86-264 (690)
471 1f8m_A Isocitrate lyase, ICL; 75.2 27 0.00092 34.8 12.0 118 206-326 168-313 (429)
472 1twd_A Copper homeostasis prot 75.0 29 0.00099 32.2 11.4 135 199-353 6-148 (256)
473 3edf_A FSPCMD, cyclomaltodextr 74.7 14 0.00048 37.8 10.3 45 277-322 290-335 (601)
474 3qxb_A Putative xylose isomera 74.5 36 0.0012 31.1 12.2 21 238-258 110-130 (316)
475 2qr6_A IMP dehydrogenase/GMP r 74.4 12 0.00043 36.1 9.3 93 244-353 144-239 (393)
476 2g0w_A LMO2234 protein; putati 74.4 50 0.0017 29.8 15.9 116 205-332 40-159 (296)
477 1vr6_A Phospho-2-dehydro-3-deo 74.3 11 0.00038 36.5 8.8 57 255-318 275-341 (350)
478 2zad_A Muconate cycloisomerase 74.3 36 0.0012 32.0 12.4 92 144-258 192-288 (345)
479 3cny_A Inositol catabolism pro 74.3 29 0.00098 31.1 11.3 112 152-286 35-180 (301)
480 2zvr_A Uncharacterized protein 74.0 14 0.00047 33.4 9.1 19 277-295 113-131 (290)
481 2htm_A Thiazole biosynthesis p 73.8 6.7 0.00023 36.7 6.8 165 152-352 27-206 (268)
482 1rvg_A Fructose-1,6-bisphospha 73.8 11 0.00036 36.0 8.3 93 244-350 5-99 (305)
483 3lg3_A Isocitrate lyase; conse 73.8 32 0.0011 34.3 12.1 145 206-353 172-352 (435)
484 3r2g_A Inosine 5'-monophosphat 73.8 67 0.0023 31.0 19.7 163 148-355 53-230 (361)
485 4hb7_A Dihydropteroate synthas 73.7 15 0.0005 34.5 9.1 77 270-351 22-106 (270)
486 3aam_A Endonuclease IV, endoiv 73.6 48 0.0016 29.3 12.6 70 237-315 83-162 (270)
487 3aal_A Probable endonuclease 4 73.4 15 0.00051 33.5 9.2 22 237-258 89-110 (303)
488 3tqv_A Nicotinate-nucleotide p 73.4 12 0.00042 35.3 8.6 62 282-354 210-271 (287)
489 3no5_A Uncharacterized protein 73.4 5.2 0.00018 37.5 6.1 57 273-329 26-86 (275)
490 4djd_C C/Fe-SP, corrinoid/iron 73.2 30 0.001 34.6 11.8 140 181-350 139-291 (446)
491 3l0g_A Nicotinate-nucleotide p 73.1 13 0.00043 35.4 8.7 86 244-353 194-279 (300)
492 3i4k_A Muconate lactonizing en 73.1 33 0.0011 33.0 12.0 114 142-283 202-318 (383)
493 1r30_A Biotin synthase; SAM ra 73.0 14 0.00047 35.2 9.2 109 235-357 99-217 (369)
494 3vkj_A Isopentenyl-diphosphate 73.0 3.6 0.00012 40.1 5.0 77 274-353 135-218 (368)
495 1ydo_A HMG-COA lyase; TIM-barr 73.0 8.5 0.00029 36.4 7.5 74 273-354 24-102 (307)
496 3nvt_A 3-deoxy-D-arabino-heptu 73.0 23 0.0008 34.6 10.9 45 275-319 324-378 (385)
497 3ffs_A Inosine-5-monophosphate 72.9 11 0.00037 37.2 8.5 66 280-352 146-211 (400)
498 1h7n_A 5-aminolaevulinic acid 72.7 12 0.0004 36.2 8.3 82 272-353 64-179 (342)
499 4g9p_A 4-hydroxy-3-methylbut-2 72.7 29 0.00098 34.3 11.3 155 146-326 36-228 (406)
500 3lg3_A Isocitrate lyase; conse 72.6 13 0.00045 37.1 9.0 44 275-318 165-220 (435)
No 1
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=100.00 E-value=1.9e-57 Score=440.67 Aligned_cols=234 Identities=40% Similarity=0.642 Sum_probs=228.4
Q ss_pred CCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe
Q 018252 122 GIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT 201 (359)
Q Consensus 122 ~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~ 201 (359)
++|++|+|+|||||||+|+++..|++++|++|+++|+++||+.||+|+|++|+++|+++|.+++++.+++.+++++.+|+
T Consensus 2 ~~~~~v~i~DtTlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~ 81 (307)
T 1ydo_A 2 PYPKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALV 81 (307)
T ss_dssp CCCSBCEEEECHHHHTGGGSSSCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEEC
T ss_pred CCCCceEEEECCCCCCcCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEEEe
Confidence 47899999999999999999999999999999999999999999999999999999999999988888777899999999
Q ss_pred CChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 018252 202 PNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY 281 (359)
Q Consensus 202 ~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~ 281 (359)
+|.+|+++++++|++.|++|.++|+.|.+.|+|+|++++++++.+++++||++|++|+++|+++|+||++++++++++.+
T Consensus 82 ~~~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~ 161 (307)
T 1ydo_A 82 PNQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIR 161 (307)
T ss_dssp CSHHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHH
T ss_pred CCHHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 282 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
+++++.++|+++|+|+||+|+++|.+++++++.+++.+|+++|++|+|||+|||+||+++|+++||++||+|+.
T Consensus 162 ~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~ 235 (307)
T 1ydo_A 162 LSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAG 235 (307)
T ss_dssp HHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGG
T ss_pred HHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEccc
Confidence 99999999999999999999999999999999999999989999999999999999999999999999999986
No 2
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=100.00 E-value=5.2e-55 Score=421.15 Aligned_cols=234 Identities=60% Similarity=0.972 Sum_probs=227.8
Q ss_pred CCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe
Q 018252 122 GIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT 201 (359)
Q Consensus 122 ~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~ 201 (359)
++|++|+|+|||||||+|+++..|++++|++|++.|+++|+++||+|+|++|+++|++.|.+++++.+++.+++++.+++
T Consensus 1 ~~~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~ 80 (298)
T 2cw6_A 1 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT 80 (298)
T ss_dssp CCCSBCEEEECTTTHHHHTCSSCCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC
T ss_pred CCCCceEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEEc
Confidence 47899999999999999999999999999999999999999999999999999999999998888888888899999999
Q ss_pred CChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 018252 202 PNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY 281 (359)
Q Consensus 202 ~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~ 281 (359)
+|.+++++++++|++.|+++.++|+.|.+.|++++++++++++.+++++||++|++|+++++++|+||++++++++++.+
T Consensus 81 ~~~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~ 160 (298)
T 2cw6_A 81 PNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAE 160 (298)
T ss_dssp CSHHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHH
T ss_pred CCHHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 282 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
+++.+.++|+++|+|+||+|.++|.+++++++.+++.+|+++|++|+|||+|||+||+++|+++||++||+|+.
T Consensus 161 ~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~ 234 (298)
T 2cw6_A 161 VTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVA 234 (298)
T ss_dssp HHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTT
T ss_pred HHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeecc
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999875
No 3
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5e-54 Score=415.15 Aligned_cols=234 Identities=53% Similarity=0.897 Sum_probs=227.5
Q ss_pred CCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe
Q 018252 122 GIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT 201 (359)
Q Consensus 122 ~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~ 201 (359)
++|++|+|+|||||||+|+++..|++++|++|+++|+++|+++||+|+|++|+++|++.|.+++++.+.+.+++.+.+|+
T Consensus 4 ~~~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~ 83 (302)
T 2ftp_A 4 NLPKKVRLVEVGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA 83 (302)
T ss_dssp CCCSBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC
T ss_pred CCCCCcEEEeCCCCCCccCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe
Confidence 48899999999999999999999999999999999999999999999999999999999998887877777899999999
Q ss_pred CChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 018252 202 PNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY 281 (359)
Q Consensus 202 ~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~ 281 (359)
+|.+++++++++|++.|+++.+.|+.|.+.|+|++++|+++++++++++||++|+.|+++|+++|++|++++++|+++.+
T Consensus 84 ~~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~ 163 (302)
T 2ftp_A 84 PNLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAW 163 (302)
T ss_dssp CSHHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHH
T ss_pred CCHHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 282 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
+++.+.++|+|+|+|+||+|+++|.++.++++.+++.+|+++|++|+|||+|||+||+++|+++||++||+|+.
T Consensus 164 ~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~ 237 (302)
T 2ftp_A 164 VARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVA 237 (302)
T ss_dssp HHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGG
T ss_pred HHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEeccc
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999986
No 4
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=100.00 E-value=9.3e-52 Score=397.31 Aligned_cols=233 Identities=53% Similarity=0.840 Sum_probs=225.1
Q ss_pred CCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC
Q 018252 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP 202 (359)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~ 202 (359)
+|++|+|+|||||||+|+++..|++++|++|+++|+++|++.||+|+|++++++|+++|..++++.+++.+++++.++++
T Consensus 1 ~~~~v~i~d~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~~ 80 (295)
T 1ydn_A 1 MAEHVEIVEMAARDGLQNEKRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLVP 80 (295)
T ss_dssp -CCBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEECS
T ss_pred CCCceEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEeC
Confidence 57899999999999999999999999999999999999999999999999999999999888888887778999999999
Q ss_pred ChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHH
Q 018252 203 NLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYV 282 (359)
Q Consensus 203 n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~ 282 (359)
|.+++++++++|++.|+++.++|+.|.+.|++++.+++++++++++++||++|++|+++|+++|+||++++++++++.++
T Consensus 81 n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~ 160 (295)
T 1ydn_A 81 NMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASV 160 (295)
T ss_dssp SHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 283 AKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 283 a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
++.+.++|+++|+|+||+|.++|.++.++++.+++.+|.++|++|+|||+|||+||+++|+++||++||+|+.
T Consensus 161 ~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~sv~ 233 (295)
T 1ydn_A 161 TEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVG 233 (295)
T ss_dssp HHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEBTT
T ss_pred HHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEeccc
Confidence 9999999999999999999999999999999999999878999999999999999999999999999999973
No 5
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=100.00 E-value=3.9e-51 Score=405.44 Aligned_cols=222 Identities=18% Similarity=0.211 Sum_probs=209.3
Q ss_pred CCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC
Q 018252 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP 202 (359)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~ 202 (359)
+|++|+|+|||||||+|+++..|++++|++|+++|+++|+++||+|+|++. | .|++++.+..+..+++++.+|+|
T Consensus 9 ~~~~v~I~DtTLRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~---~--~d~e~v~~i~~~~~~~~i~~l~r 83 (370)
T 3rmj_A 9 QTNRVIIFDTTLRDGEQSPGAAMTKEEKIRVARQLEKLGVDIIEAGFAAAS---P--GDFEAVNAIAKTITKSTVCSLSR 83 (370)
T ss_dssp -CCBCEEEECCCCCCTTSTTCCCCHHHHHHHHHHHHHHTCSEEEEEEGGGC---H--HHHHHHHHHHTTCSSSEEEEEEE
T ss_pred CCCCEEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCCCEEEEeCCCCC---H--HHHHHHHHHHHhCCCCeEEEEec
Confidence 689999999999999999999999999999999999999999999997643 3 47778877777788999999997
Q ss_pred -ChHhHHHHHH----cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHH
Q 018252 203 -NLKGFEAAIA----AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 277 (359)
Q Consensus 203 -n~~gie~a~~----aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e 277 (359)
+.+|++++++ +|+++|++|.++|+.|.+.|+|+|++++++++.+++++|+++|..| .|+|||+++++++
T Consensus 84 ~~~~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v------~~~~ed~~r~~~~ 157 (370)
T 3rmj_A 84 AIERDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV------EFSCEDALRSEID 157 (370)
T ss_dssp SSHHHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCE------EEEEETGGGSCHH
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEE------EEecCCCCccCHH
Confidence 7899999998 8999999999999999999999999999999999999999999987 4889999999999
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCC---ceEEEEeCCCCCcHHHHHHHHHHcCCCEEecee
Q 018252 278 KVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV---EKLAVHLHDTYGQSLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~---~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl 354 (359)
|+.++++++.++||++|+||||+|+++|.+++++++++++++|+ ++|++|+|||+|||+||+++|+++||++||+|+
T Consensus 158 ~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv 237 (370)
T 3rmj_A 158 FLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTV 237 (370)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEec
Confidence 99999999999999999999999999999999999999999986 799999999999999999999999999999998
Q ss_pred e
Q 018252 355 T 355 (359)
Q Consensus 355 ~ 355 (359)
.
T Consensus 238 ~ 238 (370)
T 3rmj_A 238 N 238 (370)
T ss_dssp G
T ss_pred c
Confidence 5
No 6
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=2.5e-51 Score=400.61 Aligned_cols=223 Identities=21% Similarity=0.203 Sum_probs=196.3
Q ss_pred CCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe
Q 018252 122 GIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT 201 (359)
Q Consensus 122 ~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~ 201 (359)
++|++|+|+|||||||+|+++..|++++|++|+++|+++|++.||+|+|+.. | .|.+.+.+..+..+++++.+|+
T Consensus 2 ~~~~~v~I~DttlRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~---~--~d~e~v~~i~~~~~~~~i~~l~ 76 (325)
T 3eeg_A 2 SLGKRIFVFDTTLRDGEQVPGCQLNTEEKIIVAKALDELGVDVIEAGFPVSS---P--GDFNSVVEITKAVTRPTICALT 76 (325)
T ss_dssp --CEECEEEECGGGCC-------CCTTHHHHHHHHHHHHTCSEEEEECTTSC---H--HHHHHHHHHHHHCCSSEEEEEC
T ss_pred CCCCceEEEECCCCCcccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---H--hHHHHHHHHHHhCCCCEEEEee
Confidence 5789999999999999999999999999999999999999999999997532 2 3666666666667999999999
Q ss_pred C-ChHhHHHHHHc----CCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH
Q 018252 202 P-NLKGFEAAIAA----GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 276 (359)
Q Consensus 202 ~-n~~gie~a~~a----Gv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~ 276 (359)
| +.+|+++++++ |+++|++|.++|+.|.+.|+|+|++++++++.+++++||++|+.| .|+||+++++++
T Consensus 77 r~~~~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v------~f~~~d~~~~~~ 150 (325)
T 3eeg_A 77 RAKEADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEV------EFFCEDAGRADQ 150 (325)
T ss_dssp CSCHHHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEE------EEEEETGGGSCH
T ss_pred cCCHHHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEE------EEEccccccchH
Confidence 7 67899999998 999999999999999999999999999999999999999999987 488999999999
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCC---ceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 277 SKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV---EKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 277 e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~---~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
+++.++++++.++|+++|+|+||+|+++|.+++++++.+++++|+ ++|++|+|||+|||+||+++|+++||++||+|
T Consensus 151 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~t 230 (325)
T 3eeg_A 151 AFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECT 230 (325)
T ss_dssp HHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEB
T ss_pred HHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEe
Confidence 999999999999999999999999999999999999999999986 89999999999999999999999999999999
Q ss_pred ee
Q 018252 354 FT 355 (359)
Q Consensus 354 l~ 355 (359)
+.
T Consensus 231 v~ 232 (325)
T 3eeg_A 231 IN 232 (325)
T ss_dssp GG
T ss_pred cc
Confidence 85
No 7
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=100.00 E-value=2.9e-50 Score=394.76 Aligned_cols=226 Identities=17% Similarity=0.173 Sum_probs=204.6
Q ss_pred cCCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHH-HHHhCCCCEEEEeccCC-CCCcCCCCCHHHHHHHhh------hc
Q 018252 121 KGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIR-RLVSSGLPVVEATSFVS-PKWVPQLADARDVMEAVR------DL 192 (359)
Q Consensus 121 ~~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~-~L~~aGv~~IEvG~fvs-pk~vPq~~D~~ev~~~l~------~~ 192 (359)
.++|++|+|+|||||||+|+++..|++++|++|++ .|+++|++.||+|+|++ | .|.+.+.+..+ ..
T Consensus 14 ~~~~~~v~I~DtTlRDG~Q~~~~~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~------~~~~~v~~~~~~~~~~~~~ 87 (337)
T 3ble_A 14 TKVETRLEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASARVSK------GELETVQKIMEWAATEQLT 87 (337)
T ss_dssp -----CCEEEECHHHHHTTSTTCCCCHHHHHHHHHHHHHTTCCSEEEEEETTSCT------THHHHHHHHHHHHHHTTCG
T ss_pred ccCCCceEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCCCCh------hHHHHHHHHHhhhhhhccC
Confidence 34789999999999999999999999999999999 99999999999999975 4 23333333333 46
Q ss_pred CCCeEEEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC
Q 018252 193 EGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG 272 (359)
Q Consensus 193 ~~~~l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~ 272 (359)
+++++.+|+|+.+++++++++|++.|+++.++|+.|.+.|+|+|++++++++.+++++||++|++|+++++. |++++
T Consensus 88 ~~~~i~~l~~~~~~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~ 164 (337)
T 3ble_A 88 ERIEILGFVDGNKTVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGF 164 (337)
T ss_dssp GGEEEEEESSTTHHHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHH
T ss_pred CCCeEEEEccchhhHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCC
Confidence 789999999998899999999999999999999999999999999999999999999999999999887764 44578
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
+++++++.++++++.++||++|+|+||+|+++|.+++++++++++++|+++|++|+|||+|||+||+++|+++||++||+
T Consensus 165 ~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~ 244 (337)
T 3ble_A 165 RNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHA 244 (337)
T ss_dssp HHCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred eee
Q 018252 353 CFT 355 (359)
Q Consensus 353 tl~ 355 (359)
|+.
T Consensus 245 tv~ 247 (337)
T 3ble_A 245 SIN 247 (337)
T ss_dssp BGG
T ss_pred ecc
Confidence 985
No 8
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=100.00 E-value=1.2e-49 Score=383.72 Aligned_cols=220 Identities=17% Similarity=0.190 Sum_probs=198.5
Q ss_pred CccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCC-
Q 018252 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPN- 203 (359)
Q Consensus 125 ~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n- 203 (359)
++|+|+|||||||+|+++..|++++|++|++.|+++|++.||+|+|++ .| .|++.+....+..+++++.+|+|+
T Consensus 4 ~~v~I~DttlRDG~Q~~~~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~---~~--~d~e~v~~i~~~~~~~~i~~l~~~~ 78 (293)
T 3ewb_X 4 KKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEAGFPIS---SP--GDFECVKAIAKAIKHCSVTGLARCV 78 (293)
T ss_dssp EEEEEEECTTTCCC-----CCCHHHHHHHHHHHHHHTCSEEEEECGGG---CH--HHHHHHHHHHHHCCSSEEEEEEESS
T ss_pred CeeEEEECCCCCcCcCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC---Cc--cHHHHHHHHHHhcCCCEEEEEecCC
Confidence 579999999999999999999999999999999999999999998653 23 466777666667899999999996
Q ss_pred hHhHHHHHH----cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHH
Q 018252 204 LKGFEAAIA----AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKV 279 (359)
Q Consensus 204 ~~gie~a~~----aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l 279 (359)
.+|++++++ +|+++|++|.++|+.|.+.|+|+|++++++++.+++++||++|+.|+ |+++++++++++++
T Consensus 79 ~~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~------~~~~d~~~~~~~~~ 152 (293)
T 3ewb_X 79 EGDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQ------FSPEDATRSDRAFL 152 (293)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEE------EEEETGGGSCHHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEE------EEeccCCCCCHHHH
Confidence 479999988 58999999999999999999999999999999999999999999985 45567889999999
Q ss_pred HHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCC---ceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 280 AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV---EKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 280 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~---~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
.++++++.++|+++|+|+||+|+++|.+++++++.+++++|+ ++|++|+|||+|||+||+++|+++||++||+|+.
T Consensus 153 ~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~ 231 (293)
T 3ewb_X 153 IEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTIN 231 (293)
T ss_dssp HHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGG
T ss_pred HHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeecc
Confidence 999999999999999999999999999999999999999985 6799999999999999999999999999999985
No 9
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=100.00 E-value=1.6e-48 Score=406.86 Aligned_cols=256 Identities=14% Similarity=0.058 Sum_probs=222.6
Q ss_pred Ccccccccccccccc-cCccchhhhhhhhhcCCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEecc
Q 018252 92 NHKMFGSACDIYNSN-CNDKDIRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSF 170 (359)
Q Consensus 92 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~f 170 (359)
..||+++|+....++ .++...|+||++.++ +.++|+|+|||||+|+++..|++++|++|+++|+++||++||+||+
T Consensus 39 ~~~~~~~y~~~~~~~~~~~~~~r~wp~~~~~---~~p~i~DtTLRDGeQ~~g~~~s~eeKl~Ia~~L~~lGVd~IEaGfP 115 (644)
T 3hq1_A 39 SSMPVNRYRPFAEEVEPIRLRNRTWPDRVID---RAPLWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFP 115 (644)
T ss_dssp CCSCGGGCCCHHHHSCCCCCSSCCGGGCCCC---SCCEEEECCCCCCGGGCSSCCCHHHHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCccccccCccccCCCCCCCCCCCCCcccC---CCCEEEECCCCccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 369999999984443 678899999999866 5569999999999999999999999999999999999999999995
Q ss_pred CCCCCcCCCCCHHHHHHHhhh---cCCCeEEEEeCChH-hHHHHHH----cCCCEEEEecCCchHHHHhhhcCCHHHHHH
Q 018252 171 VSPKWVPQLADARDVMEAVRD---LEGARLPVLTPNLK-GFEAAIA----AGAKEVAIFASASEAFSKSNINCSIEDSLV 242 (359)
Q Consensus 171 vspk~vPq~~D~~ev~~~l~~---~~~~~l~~l~~n~~-gie~a~~----aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~ 242 (359)
.+ .| .|.+.+.+.++. .+++++.+|+++.+ +++++++ ++.++|++|.++|+.|.+.|+|+|++++++
T Consensus 116 ~a---sp--~D~e~v~~i~~~~l~~~~~~i~aL~r~~~~did~a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle 190 (644)
T 3hq1_A 116 SA---SQ--TDFDFVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQA 190 (644)
T ss_dssp TT---CH--HHHHHHHHHHHTTCSCTTCEEEEEEESCHHHHHHHHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHH
T ss_pred CC---Ch--hHHHHHHHHHhcCCCCCCeEEEEEecCCHhhHHHHHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHH
Confidence 43 23 477777666664 25899999999874 6888876 577799999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHHC---CcC---EEEEcCCCCCCcHHHHHHHHHHH
Q 018252 243 RYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDM---GCF---EISLGDTIGVGTPGTVVPMLEAV 315 (359)
Q Consensus 243 ~i~~~i~~Ak~~G~~-V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~---Gad---~I~L~DT~G~~~P~~v~~lv~~l 315 (359)
++.+++++|++++.. +...+.+.|++++.++++++|++++++++.++ |++ +|+|+||+|+++|.+++++|+.+
T Consensus 191 ~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l 270 (644)
T 3hq1_A 191 IATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWM 270 (644)
T ss_dssp HHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHHHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHH
Confidence 999999888877532 11123345888899999999999999999985 677 89999999999999999999999
Q ss_pred HHhCC---CceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 316 MAVVP---VEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 316 ~~~~p---~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
++++| .++|++|+|||+|||+||+++|+++||++||+|+.
T Consensus 271 ~~~v~~~~~v~l~vH~HND~GlAvANslaAv~AGA~~Vdgti~ 313 (644)
T 3hq1_A 271 SRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEGCLF 313 (644)
T ss_dssp HHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGG
T ss_pred HHhcccccCceEEEecCCCCCcHHHHHHHHHHhCCCEEEecCC
Confidence 99997 47999999999999999999999999999999974
No 10
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=100.00 E-value=3e-47 Score=382.62 Aligned_cols=223 Identities=18% Similarity=0.195 Sum_probs=187.7
Q ss_pred cCCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEE
Q 018252 121 KGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL 200 (359)
Q Consensus 121 ~~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l 200 (359)
.+++++|+|+|||||||+|+++..|++++|++|+++|+++||++||+|+| ++.|+ |.+.+....+.....++.++
T Consensus 34 ~~~~~~V~I~DtTLRDG~Q~~~~~~s~eeKl~Ia~~L~~~Gv~~IEvG~P---~asp~--d~~~~~~i~~~~~~~~v~~~ 108 (423)
T 3ivs_A 34 LSRVNNFSIIESTLREGEQFANAFFDTEKKIQIAKALDNFGVDYIELTSP---VASEQ--SRQDCEAICKLGLKCKILTH 108 (423)
T ss_dssp GCCTTSCEEEECTTTGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCT---TSCHH--HHHHHHHHHTSCCSSEEEEE
T ss_pred ccCCCcEEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEEeec---ccCHH--HHHHHHHHHhcCCCCEEEEe
Confidence 34678999999999999999999999999999999999999999999985 44455 33444444444455777777
Q ss_pred eC-ChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHH
Q 018252 201 TP-NLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKV 279 (359)
Q Consensus 201 ~~-n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l 279 (359)
++ +.+|+++|+++|++.|++|+++|+.|.+.|++++++++++++.+++++||++|++|++++ +++++++++++
T Consensus 109 ~r~~~~di~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~------eda~r~d~~~~ 182 (423)
T 3ivs_A 109 IRCHMDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSS------EDSFRSDLVDL 182 (423)
T ss_dssp EESCHHHHHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEE------ESGGGSCHHHH
T ss_pred eccChhhHHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEE------ccCcCCCHHHH
Confidence 75 889999999999999999999999999999999999999999999999999999997554 45668999999
Q ss_pred HHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 280 AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 280 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
+++++++.++|+++|+||||+|+++|.+++++++.+++.++ ++|++|+|||+|||+||+++|+++||++||+|+.
T Consensus 183 ~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~-~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ti~ 257 (423)
T 3ivs_A 183 LSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVS-CDIECHFHNDTGMAIANAYCALEAGATHIDTSIL 257 (423)
T ss_dssp HHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS-SEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGG
T ss_pred HHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcC-CeEEEEECCCCchHHHHHHHHHHhCCCEEEEecc
Confidence 99999999999999999999999999999999999999875 7999999999999999999999999999999985
No 11
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=100.00 E-value=1.2e-45 Score=367.69 Aligned_cols=218 Identities=21% Similarity=0.229 Sum_probs=187.7
Q ss_pred CccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC-C
Q 018252 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP-N 203 (359)
Q Consensus 125 ~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~-n 203 (359)
++|+|+|||||||+|+++..|++++|++|+++|+++||+.||+|++ .+.|++ .+.+....+..+++.+.+|.+ +
T Consensus 2 ~~v~I~DtTLRDG~Q~~~~~~~~~~k~~ia~~L~~~Gv~~IE~g~p---~~~~~~--~~~~~~i~~~~~~~~v~~~~r~~ 76 (382)
T 2ztj_A 2 REWKIIDSTLREGEQFEKANFSTQDKVEIAKALDEFGIEYIEVTTP---VASPQS--RKDAEVLASLGLKAKVVTHIQCR 76 (382)
T ss_dssp CCCEEEEEEETGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCT---TSCHHH--HHHHHHHHTSCCSSEEEEEEESC
T ss_pred CceEEEECCCCcccCCCCCCcCHHHHHHHHHHHHHcCcCEEEEcCC---cCCHHH--HHHHHHHHhcCCCcEEEEEcccC
Confidence 3699999999999999999999999999999999999999999984 334543 333333333356688888887 5
Q ss_pred hHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCC--CcEEEEEeeeecCCCCCCCCHHHHHH
Q 018252 204 LKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS--IPVRGYVSCVVGCPVEGAIPPSKVAY 281 (359)
Q Consensus 204 ~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G--~~V~~~is~~fg~~~~~r~~~e~l~~ 281 (359)
.+++++++++|++.|++|.++|+.|.+ |+|+|++++++++.+++++||++| ++|+++ .++.++++++++.+
T Consensus 77 ~~di~~a~~~g~~~v~i~~~~s~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~------~ed~~~~~~~~~~~ 149 (382)
T 2ztj_A 77 LDAAKVAVETGVQGIDLLFGTSKYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVEVRFS------AEDTFRSEEQDLLA 149 (382)
T ss_dssp HHHHHHHHHTTCSEEEEEECC---------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE------ETTTTTSCHHHHHH
T ss_pred hhhHHHHHHcCCCEEEEEeccCHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE------EEeCCCCCHHHHHH
Confidence 689999999999999999999999999 999999999999999999999999 777543 34677999999999
Q ss_pred HHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhC-CCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 282 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~-p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
+++++.++ |++|+||||+|+++|.+++++++.+++.+ ++++|++|+|||+|||+||+++|+++||++||+|+.
T Consensus 150 ~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~ 223 (382)
T 2ztj_A 150 VYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTIL 223 (382)
T ss_dssp HHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGG
T ss_pred HHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEccc
Confidence 99999999 99999999999999999999999999986 678999999999999999999999999999999985
No 12
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=100.00 E-value=6.8e-43 Score=343.18 Aligned_cols=213 Identities=19% Similarity=0.240 Sum_probs=192.3
Q ss_pred CCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEe----cc-CCCCCcCCCCCHHHHHHHhh-hcCCCe
Q 018252 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEAT----SF-VSPKWVPQLADARDVMEAVR-DLEGAR 196 (359)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG----~f-vspk~vPq~~D~~ev~~~l~-~~~~~~ 196 (359)
.+++|+|+|||||||+|+++..|++++|++|++.|+++|++.||+| +| ++|++.|++.+..++++.++ ..++++
T Consensus 5 ~~~~v~i~DttlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~ 84 (345)
T 1nvm_A 5 PSKKLYISDVTLRDGSHAIRHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQ 84 (345)
T ss_dssp CCCBCEEEECTTTHHHHHTTTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSE
T ss_pred CCCCcEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCE
Confidence 3468999999999999999999999999999999999999999998 64 67888899888777776665 458999
Q ss_pred EEEE-eC---ChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC
Q 018252 197 LPVL-TP---NLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG 272 (359)
Q Consensus 197 l~~l-~~---n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~ 272 (359)
+.+| .| +.++++++.++|++.|+++.+.|+. +.+.+++++|+++|+.++++++ +++
T Consensus 85 i~~l~~p~~~~~~~i~~a~~aGvd~v~I~~~~s~~--------------~~~~~~i~~ak~~G~~v~~~~~------~a~ 144 (345)
T 1nvm_A 85 IATLLLPGIGSVHDLKNAYQAGARVVRVATHCTEA--------------DVSKQHIEYARNLGMDTVGFLM------MSH 144 (345)
T ss_dssp EEEEECBTTBCHHHHHHHHHHTCCEEEEEEETTCG--------------GGGHHHHHHHHHHTCEEEEEEE------STT
T ss_pred EEEEecCCcccHHHHHHHHhCCcCEEEEEEeccHH--------------HHHHHHHHHHHHCCCEEEEEEE------eCC
Confidence 9999 55 4689999999999999999988764 2356888999999999987775 346
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCC-CceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
+++++++.++++.+.++|++.|+|+||+|.++|.+++++++++++++| +++|++|+|||+|||+||+++|+++||++||
T Consensus 145 ~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd 224 (345)
T 1nvm_A 145 MIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVD 224 (345)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEE
Confidence 899999999999999999999999999999999999999999999996 7899999999999999999999999999999
Q ss_pred ceee
Q 018252 352 PCFT 355 (359)
Q Consensus 352 ~tl~ 355 (359)
+|+.
T Consensus 225 ~tv~ 228 (345)
T 1nvm_A 225 ASLA 228 (345)
T ss_dssp EBGG
T ss_pred ecch
Confidence 9974
No 13
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=100.00 E-value=2.5e-41 Score=343.57 Aligned_cols=214 Identities=18% Similarity=0.206 Sum_probs=186.5
Q ss_pred cCCCCccEEEeCCCcccCCCCC-CCCCHHHHHHHHHHHHhCCCCEEEEeccC---CC-CCcCCCCCHHHHHHHhhh-cCC
Q 018252 121 KGIPRFVKIVEVGPRDGLQNEK-NTVPTGVKVELIRRLVSSGLPVVEATSFV---SP-KWVPQLADARDVMEAVRD-LEG 194 (359)
Q Consensus 121 ~~~p~~V~I~D~TLRDG~Q~~~-~~~~~~~k~~ia~~L~~aGv~~IEvG~fv---sp-k~vPq~~D~~ev~~~l~~-~~~ 194 (359)
+..+++|+|+|||||||+|+++ ..|++++|++|++.|+++|++.||+|+++ ++ +++ ..|..++++.+++ .++
T Consensus 2 ~~~~~~V~I~DtTLRDG~Qs~~~~~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~--~~d~~e~l~~i~~~~~~ 79 (464)
T 2nx9_A 2 TQAIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFL--GEDPWQRLRLLKQAMPN 79 (464)
T ss_dssp --CCCCCEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTT--CCCHHHHHHHHHHHCSS
T ss_pred CCCCCCcEEEECCccccccCCCCcCCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhcc--CCCHHHHHHHHHHhCCC
Confidence 3456889999999999999985 58999999999999999999999999842 21 222 2466666666664 689
Q ss_pred CeEEEEeC--Ch------------HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEE
Q 018252 195 ARLPVLTP--NL------------KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRG 260 (359)
Q Consensus 195 ~~l~~l~~--n~------------~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~ 260 (359)
+++.+|+| |. .++++++++|++.|++|.++|+. +++.+++++||++|+.|++
T Consensus 80 ~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~--------------~ni~~~i~~ak~~G~~v~~ 145 (464)
T 2nx9_A 80 TPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDV--------------RNMQQALQAVKKMGAHAQG 145 (464)
T ss_dssp SCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEeccccccCcccccchhhHHHHHHHHhCCcCEEEEEEecCHH--------------HHHHHHHHHHHHCCCEEEE
Confidence 99999996 32 35789999999999999999886 2456889999999999999
Q ss_pred EEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHH
Q 018252 261 YVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNIL 340 (359)
Q Consensus 261 ~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANal 340 (359)
++++.+++ ++++++++++++++.++||++|+||||+|.++|.+++++|++++++++ ++|++|+|||+|||+||++
T Consensus 146 ~i~~~~~~----~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~-~~i~~H~Hnd~GlAvAN~l 220 (464)
T 2nx9_A 146 TLCYTTSP----VHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVD-VELHLHCHSTAGLADMTLL 220 (464)
T ss_dssp EEECCCCT----TCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCC-SCEEEEECCTTSCHHHHHH
T ss_pred EEEeeeCC----CCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcC-CeEEEEECCCCChHHHHHH
Confidence 99866654 679999999999999999999999999999999999999999999994 7999999999999999999
Q ss_pred HHHHcCCCEEeceee
Q 018252 341 ISLQVSPMHAKPCFT 355 (359)
Q Consensus 341 aAv~AGa~~ID~tl~ 355 (359)
+|++|||++||+|+.
T Consensus 221 aAv~AGa~~VD~ti~ 235 (464)
T 2nx9_A 221 KAIEAGVDRVDTAIS 235 (464)
T ss_dssp HHHHTTCSEEEEBCG
T ss_pred HHHHhCCCEEEEecc
Confidence 999999999999986
No 14
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=100.00 E-value=2.8e-41 Score=347.93 Aligned_cols=212 Identities=18% Similarity=0.226 Sum_probs=187.0
Q ss_pred CCccEEEeCCCcccCCCCC-CCCCHHHHHHHHHHHHhCCCCEEEEeccC---CC-CCcCCCCCHHHHHHHhhh-cCCCeE
Q 018252 124 PRFVKIVEVGPRDGLQNEK-NTVPTGVKVELIRRLVSSGLPVVEATSFV---SP-KWVPQLADARDVMEAVRD-LEGARL 197 (359)
Q Consensus 124 p~~V~I~D~TLRDG~Q~~~-~~~~~~~k~~ia~~L~~aGv~~IEvG~fv---sp-k~vPq~~D~~ev~~~l~~-~~~~~l 197 (359)
|++|+|+|||||||+|+++ ..|++++|++|++.|+++|++.||+|+++ ++ +++ ..|..++++.+++ .+++++
T Consensus 22 ~~~V~I~DtTLRDG~Qs~~~~~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl--~~d~~e~lr~l~~~~~~~~l 99 (539)
T 1rqb_A 22 PREVGITELVLRDAHQSLMATRMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFL--NEDPWERLRTFRKLMPNSRL 99 (539)
T ss_dssp SEECEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTS--CCCHHHHHHHHHHHCTTSCE
T ss_pred CCceEEEECCCCchhccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhcc--CCCHHHHHHHHHHhCCCCEE
Confidence 4679999999999999995 68999999999999999999999999843 21 222 2466666666664 689999
Q ss_pred EEEeC--Ch------------HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 018252 198 PVLTP--NL------------KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVS 263 (359)
Q Consensus 198 ~~l~~--n~------------~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is 263 (359)
.+|+| |. +++++++++|++.|++|.++|+. +++.+++++|+++|+.++++++
T Consensus 100 ~~L~R~~N~~G~~~ypddv~~~~ve~a~~aGvd~vrIf~s~sd~--------------~ni~~~i~~ak~~G~~v~~~i~ 165 (539)
T 1rqb_A 100 QMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDP--------------RNMAHAMAAVKKAGKHAQGTIC 165 (539)
T ss_dssp EEEECGGGTTSSSCCCHHHHHHHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEeccccccCcccCcccccHHHHHHHHhCCCCEEEEEEehhHH--------------HHHHHHHHHHHHCCCeEEEEEE
Confidence 99995 32 35789999999999999999886 3467899999999999999998
Q ss_pred eeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCC-CceEEEEeCCCCCcHHHHHHHH
Q 018252 264 CVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILIS 342 (359)
Q Consensus 264 ~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~GLAlANalaA 342 (359)
++++ .++++++++++++++.++||++|+|+||+|+++|.+++++|+++++++| +++|++|+|||+|||+||+++|
T Consensus 166 ~~~~----~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laA 241 (539)
T 1rqb_A 166 YTIS----PVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKA 241 (539)
T ss_dssp CCCS----TTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHH
T ss_pred eeeC----CCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHH
Confidence 6655 4789999999999999999999999999999999999999999999997 7899999999999999999999
Q ss_pred HHcCCCEEeceee
Q 018252 343 LQVSPMHAKPCFT 355 (359)
Q Consensus 343 v~AGa~~ID~tl~ 355 (359)
++|||++||+|+.
T Consensus 242 veAGa~~VD~ti~ 254 (539)
T 1rqb_A 242 IEAGVDVVDTAIS 254 (539)
T ss_dssp HHTTCSEEEEBCG
T ss_pred HHhCCCEEEEecc
Confidence 9999999999985
No 15
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=7.3e-41 Score=325.93 Aligned_cols=208 Identities=16% Similarity=0.105 Sum_probs=175.4
Q ss_pred ccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc----CCCCCHHHHHHHhhhcCCCeEEEEe
Q 018252 126 FVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWV----PQLADARDVMEAVRDLEGARLPVLT 201 (359)
Q Consensus 126 ~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~v----Pq~~D~~ev~~~l~~~~~~~l~~l~ 201 (359)
+|+|+|||||||+|++++.|++++|++|+++|+++|++.||+|+|++|+++ |++.++ ++++.+++.+++++.+|+
T Consensus 2 ~V~I~DtTlRDG~Qs~~~~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~-e~l~~i~~~~~~~~~~L~ 80 (320)
T 3dxi_A 2 SLKILDCTLRDGGYYTNWDFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPV-SVLKHLRNISTKKIAIML 80 (320)
T ss_dssp -CEEEECHHHHHGGGGTTCCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCH-HHHHHHHHHCCSEEEEEE
T ss_pred eEEEEECCcCccccCCCCcCCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccChH-HHHHHHhhccCCeEEEEe
Confidence 589999999999999999999999999999999999999999999999875 777764 455666668999999999
Q ss_pred CCh----HhHHH---HHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCC
Q 018252 202 PNL----KGFEA---AIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAI 274 (359)
Q Consensus 202 ~n~----~gie~---a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~ 274 (359)
|+. .+++. +.++|++.|+++.+.. .++.+.+++++||++|++|++++++ .++. .
T Consensus 81 r~~~~~~~dv~~~~~a~~~Gvd~~ri~~~~~--------------nle~~~~~v~~ak~~G~~v~~~~~~--~~~~---~ 141 (320)
T 3dxi_A 81 NEKNTTPEDLNHLLLPIIGLVDMIRIAIDPQ--------------NIDRAIVLAKAIKTMGFEVGFNVMY--MSKW---A 141 (320)
T ss_dssp EGGGCCGGGHHHHHGGGTTTCSEEEEEECGG--------------GHHHHHHHHHHHHTTTCEEEEEECC--TTTG---G
T ss_pred cCCCCChhhHHHHHHhhhcCCCEEEEEecHH--------------HHHHHHHHHHHHHHCCCEEEEEEEe--CCCC---C
Confidence 862 24544 4568999999986421 1677789999999999999988874 2322 1
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEecee
Q 018252 275 PPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 275 ~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl 354 (359)
+++++++.+.+ .++|++.|+|+||+|.++|.+++++++.++++++ ++|++|+|||+|||+||+++|+++||++||+|+
T Consensus 142 ~~~~~l~~~~~-~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~-~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si 219 (320)
T 3dxi_A 142 EMNGFLSKLKA-IDKIADLFCMVDSFGGITPKEVKNLLKEVRKYTH-VPVGFHGHDNLQLGLINSITAIDDGIDFIDATI 219 (320)
T ss_dssp GSTTSGGGGGG-GTTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCC-SCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBG
T ss_pred CHHHHHHHHHH-hhCCCCEEEECcccCCCCHHHHHHHHHHHHHhCC-CeEEEEeCCCCccHHHHHHHHHHhCCCEEEEec
Confidence 34344444444 4789999999999999999999999999999997 799999999999999999999999999999998
Q ss_pred e
Q 018252 355 T 355 (359)
Q Consensus 355 ~ 355 (359)
.
T Consensus 220 ~ 220 (320)
T 3dxi_A 220 T 220 (320)
T ss_dssp G
T ss_pred c
Confidence 4
No 16
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=100.00 E-value=5e-38 Score=333.31 Aligned_cols=212 Identities=19% Similarity=0.137 Sum_probs=183.6
Q ss_pred CCccEEEeCCCcccCCCCCC-CCCHHHHHHHHHHHHhC--CCCEEEEe--------c-cCCCCCcCCCCCHHHHHHHhhh
Q 018252 124 PRFVKIVEVGPRDGLQNEKN-TVPTGVKVELIRRLVSS--GLPVVEAT--------S-FVSPKWVPQLADARDVMEAVRD 191 (359)
Q Consensus 124 p~~V~I~D~TLRDG~Q~~~~-~~~~~~k~~ia~~L~~a--Gv~~IEvG--------~-fvspk~vPq~~D~~ev~~~l~~ 191 (359)
+++|+|+|||||||+|+++. +|++++|++|+++|+++ |++.||+| + |.+. .+++.+.++.+.
T Consensus 100 ~~~I~I~DTTLRDG~Qs~~~~r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e------~p~e~l~~l~~~ 173 (718)
T 3bg3_A 100 HPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYE------CPWRRLQELREL 173 (718)
T ss_dssp CCSCEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCC------CHHHHHHHHHHH
T ss_pred cCCeEEeecCCChhhCCCCCcCCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCC------CHHHHHHHHHHH
Confidence 57899999999999999974 69999999999999998 56669998 2 2221 234445555556
Q ss_pred cCCCeEEEEeCC--------------hHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCc
Q 018252 192 LEGARLPVLTPN--------------LKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP 257 (359)
Q Consensus 192 ~~~~~l~~l~~n--------------~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~ 257 (359)
++++.+.+|+|. .+++++++++|++.|++|.+.++ +++++..+++++++|..
T Consensus 174 ~~~~~l~~l~R~~n~vgy~~~p~~~~~~~i~~a~~~Gvd~irIf~s~n~--------------l~~l~~~i~~ak~~G~~ 239 (718)
T 3bg3_A 174 IPNIPFQMLLRGANAVGYTNYPDNVVFKFCEVAKENGMDVFRVFDSLNY--------------LPNMLLGMEAAGSAGGV 239 (718)
T ss_dssp CSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHHHTCCEEEEECSSCC--------------HHHHHHHHHHHHTTTSE
T ss_pred cccchHHHHhcccccccccccCCcchHHHHHHHHhcCcCEEEEEecHHH--------------HHHHHHHHHHHHHcCCe
Confidence 788999888864 26789999999999999998764 34677889999999999
Q ss_pred EEEEEeee--ecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH
Q 018252 258 VRGYVSCV--VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 335 (359)
Q Consensus 258 V~~~is~~--fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA 335 (359)
+++++++. |.+|..+.++++|++++++++.++||++|+|+||+|+++|.+++++|+++++++|+++|++|+|||+|||
T Consensus 240 v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlA 319 (718)
T 3bg3_A 240 VEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAG 319 (718)
T ss_dssp EEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCH
T ss_pred EEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHH
Confidence 99999865 3566655679999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHHcCCCEEeceee
Q 018252 336 LPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 336 lANalaAv~AGa~~ID~tl~ 355 (359)
+||+++|++|||++||+|+.
T Consensus 320 vANslaAveAGa~~VD~ti~ 339 (718)
T 3bg3_A 320 VAAMLACAQAGADVVDVAAD 339 (718)
T ss_dssp HHHHHHHHHTTCSEEEEBCG
T ss_pred HHHHHHHHHhCCCEEEecCc
Confidence 99999999999999999985
No 17
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=3.9e-35 Score=325.98 Aligned_cols=216 Identities=14% Similarity=0.085 Sum_probs=179.8
Q ss_pred CCccEEEeCCCcccCCCCCC-CCCHHHHHHHHHHHHhCCCC--EEEEe----ccCCCCCcCCCCCHHHHHHHhhhcCCCe
Q 018252 124 PRFVKIVEVGPRDGLQNEKN-TVPTGVKVELIRRLVSSGLP--VVEAT----SFVSPKWVPQLADARDVMEAVRDLEGAR 196 (359)
Q Consensus 124 p~~V~I~D~TLRDG~Q~~~~-~~~~~~k~~ia~~L~~aGv~--~IEvG----~fvspk~vPq~~D~~ev~~~l~~~~~~~ 196 (359)
+++|+|+|||||||+|+++. +|++++|++|++.|+++|++ .||+| +.+...+. .-.+++.+.++.+.++++.
T Consensus 548 ~~~v~i~DtTLRDG~Qs~~~~~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~-~~~p~e~l~~~~~~~~~~~ 626 (1165)
T 2qf7_A 548 EKRVLLTDTTMRDGHQSLLATRMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFL-TEDPWERLALIREGAPNLL 626 (1165)
T ss_dssp CSSCEEEECTTTHHHHHHHTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHH-CCCHHHHHHHHHHHCTTSE
T ss_pred CCceEEEecccccccccCCcccCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhc-CCCHHHHHHHHHHHchhhH
Confidence 47899999999999999974 79999999999999999554 59994 22110000 0123444444445678899
Q ss_pred EEEEeCC--------------hHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 018252 197 LPVLTPN--------------LKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYV 262 (359)
Q Consensus 197 l~~l~~n--------------~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~i 262 (359)
+.+|+|. .+++++++++|++.|++|.+.++ +++++..+++++++|..+++++
T Consensus 627 ~~~l~R~~n~vg~~~~~~~~~~~~i~~a~~~g~d~irif~sl~~--------------~~~~~~~i~~~~~~g~~v~~~i 692 (1165)
T 2qf7_A 627 LQMLLRGANGVGYTNYPDNVVKYFVRQAAKGGIDLFRVFDCLNW--------------VENMRVSMDAIAEENKLCEAAI 692 (1165)
T ss_dssp EEEEEETTTBTCSSCCCHHHHHHHHHHHHHHTCCEEEEECTTCC--------------GGGGHHHHHHHHHTTCEEEEEE
T ss_pred HHHHhccccccccccCCchhHHHHHHHHHhcCcCEEEEEeeHHH--------------HHHHHHHHHHHHhccceEEEEE
Confidence 9888752 25799999999999999988654 3456788999999999999999
Q ss_pred eee--ecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHH
Q 018252 263 SCV--VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNIL 340 (359)
Q Consensus 263 s~~--fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANal 340 (359)
++. |.+++.+.++++|++++++++.++||++|+||||+|+++|.+++++++++++++ +++|++|+|||+|||+||++
T Consensus 693 ~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAn~l 771 (1165)
T 2qf7_A 693 CYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREAT-GLPIHFHTHDTSGIAAATVL 771 (1165)
T ss_dssp ECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-SSCEEEEECBTTSCHHHHHH
T ss_pred EEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHH
Confidence 865 455554459999999999999999999999999999999999999999999999 57999999999999999999
Q ss_pred HHHHcCCCEEeceee
Q 018252 341 ISLQVSPMHAKPCFT 355 (359)
Q Consensus 341 aAv~AGa~~ID~tl~ 355 (359)
+|++|||++||+|+.
T Consensus 772 aAv~aGa~~vd~ti~ 786 (1165)
T 2qf7_A 772 AAVEAGVDAVDAAMD 786 (1165)
T ss_dssp HHHHTTCSEEEEBCG
T ss_pred HHHHhCCCEEEeccc
Confidence 999999999999985
No 18
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=9.1e-35 Score=322.56 Aligned_cols=216 Identities=17% Similarity=0.129 Sum_probs=186.7
Q ss_pred CCCccEEEeCCCcccCCCCCCC-CCHHHHHHHHHHHHhC--CCCEEEEec---cCCCCCcCCC-CCHHHHHHHhh-hcCC
Q 018252 123 IPRFVKIVEVGPRDGLQNEKNT-VPTGVKVELIRRLVSS--GLPVVEATS---FVSPKWVPQL-ADARDVMEAVR-DLEG 194 (359)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~-~~~~~k~~ia~~L~~a--Gv~~IEvG~---fvspk~vPq~-~D~~ev~~~l~-~~~~ 194 (359)
.+++|+|+|||||||+|+++.. |++++|++|+++|+++ |+..||++. |.. .+|.+ .|..+.++.++ ..++
T Consensus 529 ~~~~v~I~DtTlRDG~Qs~~~~r~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~--~~~~~~e~~~e~l~~l~~~~~~ 606 (1150)
T 3hbl_A 529 KQDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTADVFKDGFSLEMWGGATFDV--AYNFLKENPWERLERLRKAIPN 606 (1150)
T ss_dssp TCSSBEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHH--HHHTSCCCHHHHHHHHHHHCCS
T ss_pred hCCceEEEECccchhhccCCCcCCCHHHHHHHHHHHHHhhCCCcEEeecCCceEEe--cccccCCCHHHHHHHHHHhCCC
Confidence 4578999999999999998875 9999999999999999 999999952 211 12344 46566566665 5799
Q ss_pred CeEEEEeCC--------------hHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEE
Q 018252 195 ARLPVLTPN--------------LKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRG 260 (359)
Q Consensus 195 ~~l~~l~~n--------------~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~ 260 (359)
+.+.+|+|. .+++++|+++|++.|++|.+.|+.++.. .+++.+++.|..+.+
T Consensus 607 ~~~~~l~R~~n~vgy~~~pd~v~~~~v~~a~~~Gvd~irif~~~sd~~~~~--------------~~~~~~~e~g~~~~~ 672 (1150)
T 3hbl_A 607 VLFQMLLRASNAVGYKNYPDNVIHKFVQESAKAGIDVFRIFDSLNWVDQMK--------------VANEAVQEAGKISEG 672 (1150)
T ss_dssp SEEEEEEETTTBTCSSCCCHHHHHHHHHHHHHTTCCEEEEECTTCCGGGGH--------------HHHHHHHHTTCEEEE
T ss_pred CeEEEEeccccccccccCCchhHHHHHHHHHhCCcCEEEEEeeCCHHHHHH--------------HHHHHHHHHhhheeE
Confidence 999999963 1468999999999999999999988664 345566778999999
Q ss_pred EEeee---ecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHH
Q 018252 261 YVSCV---VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLP 337 (359)
Q Consensus 261 ~is~~---fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlA 337 (359)
.++.. |+.++.++++++|++++++++.++|+++|+|+||+|+++|.+++++++++++++ +++|++|+|||+|||+|
T Consensus 673 ~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnt~G~a~A 751 (1150)
T 3hbl_A 673 TICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV-DLPIHLHTHDTSGNGLL 751 (1150)
T ss_dssp EEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-CSCEEEEECBTTSCHHH
T ss_pred EEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc-CCeEEEEeCCCCcHHHH
Confidence 99877 666677889999999999999999999999999999999999999999999997 58999999999999999
Q ss_pred HHHHHHHcCCCEEeceee
Q 018252 338 NILISLQVSPMHAKPCFT 355 (359)
Q Consensus 338 NalaAv~AGa~~ID~tl~ 355 (359)
|+++|++|||++||+|+.
T Consensus 752 n~laA~~aGa~~vD~ai~ 769 (1150)
T 3hbl_A 752 TYKQAIDAGVDIIDTAVA 769 (1150)
T ss_dssp HHHHHHHTTCSEEEEBCG
T ss_pred HHHHHHHhCCCEEEEecc
Confidence 999999999999999985
No 19
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.77 E-value=1.6e-07 Score=88.28 Aligned_cols=179 Identities=13% Similarity=0.136 Sum_probs=113.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccC-CCCC-cCCCC-----------CHHHH---HHHhhh-cCCCeEEEEeC-C--
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFV-SPKW-VPQLA-----------DARDV---MEAVRD-LEGARLPVLTP-N-- 203 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fv-spk~-vPq~~-----------D~~ev---~~~l~~-~~~~~l~~l~~-n-- 203 (359)
..+.+.++++++.|.+.|+|.||+|.+. .|.+ .|... ..+.+ .+.+++ .|++.+..+.- |
T Consensus 27 ~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v 106 (262)
T 2ekc_A 27 YPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPI 106 (262)
T ss_dssp SSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHH
T ss_pred CCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHH
Confidence 3667899999999999999999999853 3321 01000 00112 233333 23666666533 3
Q ss_pred -----hHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH
Q 018252 204 -----LKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 278 (359)
Q Consensus 204 -----~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~ 278 (359)
.+.++.+.++|++.+.+.. .. .+.+.+.++.++++|+.+.. +..| .++++.
T Consensus 107 ~~~g~~~f~~~~~~aG~dgvii~d------------l~----~ee~~~~~~~~~~~gl~~i~-----l~~p---~t~~~r 162 (262)
T 2ekc_A 107 FRIGLEKFCRLSREKGIDGFIVPD------------LP----PEEAEELKAVMKKYVLSFVP-----LGAP---TSTRKR 162 (262)
T ss_dssp HHHCHHHHHHHHHHTTCCEEECTT------------CC----HHHHHHHHHHHHHTTCEECC-----EECT---TCCHHH
T ss_pred HHhhHHHHHHHHHHcCCCEEEECC------------CC----HHHHHHHHHHHHHcCCcEEE-----EeCC---CCCHHH
Confidence 2456778899999766631 11 14566788899999997521 2222 356777
Q ss_pred HHHHHHHHHHCCcCEEEEcCCCCCCcHHH---HHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 279 VAYVAKELHDMGCFEISLGDTIGVGTPGT---VVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 279 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~---v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
+.++++..... ++.+.+.++.|..+|.. +.++++.+++.. ++++.+ .+|...++.++++.+|||.|=+
T Consensus 163 l~~ia~~a~gf-iy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~v----G~GI~t~e~~~~~~~gADgvIV 233 (262)
T 2ekc_A 163 IKLICEAADEM-TYFVSVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVV----GFGVSKKEHAREIGSFADGVVV 233 (262)
T ss_dssp HHHHHHHCSSC-EEEESSCC---------CHHHHHHHHHHHHHC-CSCEEE----ESSCCSHHHHHHHHTTSSEEEE
T ss_pred HHHHHHhCCCC-EEEEecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEE----eCCCCCHHHHHHHHcCCCEEEE
Confidence 77777665322 45667789999998855 889999999976 467777 8899988999999999988743
No 20
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=98.52 E-value=3.8e-06 Score=81.26 Aligned_cols=199 Identities=12% Similarity=0.122 Sum_probs=133.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC---ChHhHHHHHHcCCCEEE
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP---NLKGFEAAIAAGAKEVA 219 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~---n~~gie~a~~aGv~~V~ 219 (359)
..++.++.++.++.+.+.|++.|-+++...|...+...+..++++.+++..+..+. +.+ +.+.++...++|++.+.
T Consensus 89 ~~ls~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~-~s~g~~~~e~l~~L~~aG~~~i~ 167 (350)
T 3t7v_A 89 YRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIM-ISPGLMDNATLLKAREKGANFLA 167 (350)
T ss_dssp CBCCHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEE-EECSSCCHHHHHHHHHTTEEEEE
T ss_pred eeCCHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEE-EeCCCCCHHHHHHHHHcCCCEEE
Confidence 35799999999999999999998876544332110112223444444432244443 333 45778999999999888
Q ss_pred EecCCc--hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE-
Q 018252 220 IFASAS--EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL- 296 (359)
Q Consensus 220 i~~s~S--~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L- 296 (359)
+.+-+. +.+.+.+-+.+. +...++++.|++.|+.+...+. +|. --+++.+.+.++.+.+.+++.|.+
T Consensus 168 i~lEt~~~~~~~~i~~~~~~----~~~l~~i~~a~~~Gi~v~~~~i--~Gl----get~e~~~~~l~~l~~l~~~~v~~~ 237 (350)
T 3t7v_A 168 LYQETYDTELYRKLRVGQSF----DGRVNARRFAKQQGYCVEDGIL--TGV----GNDIESTILSLRGMSTNDPDMVRVM 237 (350)
T ss_dssp CCCBCSCHHHHHHHSTTCCH----HHHHHHHHHHHHHTCEEEEEEE--ESS----SCCHHHHHHHHHHHHHTCCSEEEEE
T ss_pred EeeecCCHHHHHHhCCCCCH----HHHHHHHHHHHHcCCeEccceE--eec----CCCHHHHHHHHHHHHhCCCCEEEec
Confidence 765443 333333223444 4556778889999999877665 654 236788999999999999987665
Q ss_pred -----cCC----CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 297 -----GDT----IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 297 -----~DT----~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
++| ....++.++.++++..|-.+|.+.|-.-.+ .++...+..|+.+||+.+.++++
T Consensus 238 ~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~~I~a~~~---~~g~~~~~~~l~~Gan~~~~~~~ 302 (350)
T 3t7v_A 238 TFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLD---LEGIDGMVLRLNAGANIVTSILP 302 (350)
T ss_dssp ECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTSBCEEEHH---HHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCcCcccccc---ccChhHHHHHHhcCCceecCCCC
Confidence 233 123466788999998888888754444222 34556789999999999998875
No 21
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.32 E-value=5.6e-06 Score=78.50 Aligned_cols=177 Identities=16% Similarity=0.138 Sum_probs=110.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEecc-CCCCC-cCCCC-----------CHHHHHHHhh---hc-CCCeEEEEeC-Ch--
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSF-VSPKW-VPQLA-----------DARDVMEAVR---DL-EGARLPVLTP-NL-- 204 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~f-vspk~-vPq~~-----------D~~ev~~~l~---~~-~~~~l~~l~~-n~-- 204 (359)
-+.+.-+++++.|.+.|+|.||+|.+ ..|-+ .|... ..+.+++.++ +. .++.+..++- |.
T Consensus 31 P~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~ 110 (271)
T 3nav_A 31 PNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVY 110 (271)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 45788999999999999999999984 33321 01111 1123344444 32 5666666653 32
Q ss_pred -----HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHH
Q 018252 205 -----KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKV 279 (359)
Q Consensus 205 -----~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l 279 (359)
+-++.+.++|++.+-+..- .. +...++.+.++++|+.+..-+ . ..++++.+
T Consensus 111 ~~g~~~f~~~~~~aGvdGvIipDl------------p~----ee~~~~~~~~~~~gl~~I~lv-----a---p~t~~eri 166 (271)
T 3nav_A 111 ARGIDDFYQRCQKAGVDSVLIADV------------PT----NESQPFVAAAEKFGIQPIFIA-----P---PTASDETL 166 (271)
T ss_dssp HTCHHHHHHHHHHHTCCEEEETTS------------CG----GGCHHHHHHHHHTTCEEEEEE-----C---TTCCHHHH
T ss_pred HHhHHHHHHHHHHCCCCEEEECCC------------CH----HHHHHHHHHHHHcCCeEEEEE-----C---CCCCHHHH
Confidence 2367788899999877421 11 224577888999999863322 1 13456665
Q ss_pred HHHHHHHHHCCcCEEEEcCCCCCCc--HHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHH-HHHcCCCEEe
Q 018252 280 AYVAKELHDMGCFEISLGDTIGVGT--PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILI-SLQVSPMHAK 351 (359)
Q Consensus 280 ~~~a~~l~~~Gad~I~L~DT~G~~~--P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANala-Av~AGa~~ID 351 (359)
.++++..... ++.+++.++.|... |..+.++++.+|+... +|+.+ .+|...+.... ++.+||+.|=
T Consensus 167 ~~i~~~~~gf-iY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~-~Pv~v----GfGIst~e~~~~~~~~gADgvI 235 (271)
T 3nav_A 167 RAVAQLGKGY-TYLLSRAGVTGAETKANMPVHALLERLQQFDA-PPALL----GFGISEPAQVKQAIEAGAAGAI 235 (271)
T ss_dssp HHHHHHCCSC-EEECCCC--------CCHHHHHHHHHHHHTTC-CCEEE----CSSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHCCCe-EEEEeccCCCCcccCCchhHHHHHHHHHHhcC-CCEEE----ECCCCCHHHHHHHHHcCCCEEE
Confidence 5555542221 45556778888864 7789999999999764 57777 67777677777 9999999773
No 22
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.28 E-value=6.1e-06 Score=78.09 Aligned_cols=178 Identities=17% Similarity=0.201 Sum_probs=109.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEecc-CCCCC-cCCCC-----------CHHHHHHHh---hhc-CCCeEEEEeC-Ch-
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSF-VSPKW-VPQLA-----------DARDVMEAV---RDL-EGARLPVLTP-NL- 204 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~f-vspk~-vPq~~-----------D~~ev~~~l---~~~-~~~~l~~l~~-n~- 204 (359)
..+.+.-+++++.|.++|+|.||+|.+ ..|-+ .|... ..+.+++.+ ++. .++.+..++- |.
T Consensus 28 dP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv 107 (267)
T 3vnd_A 28 DPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLV 107 (267)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHH
Confidence 356788999999999999999999974 43321 01110 111233333 332 4555666653 42
Q ss_pred ------HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH
Q 018252 205 ------KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 278 (359)
Q Consensus 205 ------~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~ 278 (359)
+-++.+.++|++.+-+..-. ++...+.++.++++|+++..-+ .| .++++.
T Consensus 108 ~~~g~e~f~~~~~~aGvdgvii~Dlp----------------~ee~~~~~~~~~~~gl~~i~li-----aP---~t~~er 163 (267)
T 3vnd_A 108 FANGIDEFYTKAQAAGVDSVLIADVP----------------VEESAPFSKAAKAHGIAPIFIA-----PP---NADADT 163 (267)
T ss_dssp HHHCHHHHHHHHHHHTCCEEEETTSC----------------GGGCHHHHHHHHHTTCEEECEE-----CT---TCCHHH
T ss_pred HHhhHHHHHHHHHHcCCCEEEeCCCC----------------HhhHHHHHHHHHHcCCeEEEEE-----CC---CCCHHH
Confidence 33677888999998774211 1234577888999999863322 11 345665
Q ss_pred HHHHHHHHHHCCcCEEEEcCCCCCCc--HHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHH-HHHcCCCEEe
Q 018252 279 VAYVAKELHDMGCFEISLGDTIGVGT--PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILI-SLQVSPMHAK 351 (359)
Q Consensus 279 l~~~a~~l~~~Gad~I~L~DT~G~~~--P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANala-Av~AGa~~ID 351 (359)
+..+++..... ++.+++..+.|... |..+.++++.+++... +++.+ .+|........ ++.+||+.|=
T Consensus 164 i~~i~~~~~gf-vY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~-~pv~v----GfGI~~~e~~~~~~~~gADgvV 233 (267)
T 3vnd_A 164 LKMVSEQGEGY-TYLLSRAGVTGTESKAGEPIENILTQLAEFNA-PPPLL----GFGIAEPEQVRAAIKAGAAGAI 233 (267)
T ss_dssp HHHHHHHCCSC-EEESCCCCCC--------CHHHHHHHHHTTTC-CCEEE----CSSCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhCCCc-EEEEecCCCCCCccCCcHHHHHHHHHHHHhcC-CCEEE----ECCcCCHHHHHHHHHcCCCEEE
Confidence 55555542211 34455677778764 7779999999998754 57777 77777666666 9999999873
No 23
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.27 E-value=1.6e-05 Score=74.74 Aligned_cols=175 Identities=14% Similarity=0.130 Sum_probs=112.7
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHH--------------------HHHHHhhhc-CCCeEEEEeC
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADAR--------------------DVMEAVRDL-EGARLPVLTP 202 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~--------------------ev~~~l~~~-~~~~l~~l~~ 202 (359)
.++.+...++++.|.++|+|.||+|.+.+. |.+ |-. ++.+.+++. .++.+..++-
T Consensus 27 dp~~~~~~~~~~~l~~~GaD~ieig~P~sd---p~~-DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y 102 (268)
T 1qop_A 27 DPGIEQSLKIIDTLIDAGADALELGVPFSD---PLA-DGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMY 102 (268)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSC---CTT-CCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCC---ccC-CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEc
Confidence 466789999999999999999999985332 211 211 223344443 4555655542
Q ss_pred -C-------hHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCC
Q 018252 203 -N-------LKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAI 274 (359)
Q Consensus 203 -n-------~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~ 274 (359)
| .+.++.+.++|++.+.+..-. .+.+.++++.++++|+++.. +..| .+
T Consensus 103 ~n~v~~~g~~~~~~~~~~aGadgii~~d~~----------------~e~~~~~~~~~~~~g~~~i~-----l~~p---~t 158 (268)
T 1qop_A 103 ANLVFNNGIDAFYARCEQVGVDSVLVADVP----------------VEESAPFRQAALRHNIAPIF-----ICPP---NA 158 (268)
T ss_dssp HHHHHTTCHHHHHHHHHHHTCCEEEETTCC----------------GGGCHHHHHHHHHTTCEEEC-----EECT---TC
T ss_pred ccHHHHhhHHHHHHHHHHcCCCEEEEcCCC----------------HHHHHHHHHHHHHcCCcEEE-----EECC---CC
Confidence 3 256788889999987764221 12345677888999997632 2222 25
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCCCCCCcH--HHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHH-HHHHHHcCCCEEe
Q 018252 275 PPSKVAYVAKELHDMGCFEISLGDTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPN-ILISLQVSPMHAK 351 (359)
Q Consensus 275 ~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P--~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlAN-alaAv~AGa~~ID 351 (359)
+.+.+.++++..... +..+++..+.|..+| ..+.++++.+++.. +++|.+ +.|...++ +..++.+||+.|=
T Consensus 159 ~~~~i~~i~~~~~g~-v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~v----ggGI~t~e~~~~~~~agAD~vV 232 (268)
T 1qop_A 159 DDDLLRQVASYGRGY-TYLLSRSGVTGAENRGALPLHHLIEKLKEYH-AAPALQ----GFGISSPEQVSAAVRAGAAGAI 232 (268)
T ss_dssp CHHHHHHHHHHCCSC-EEEESSSSCCCSSSCC--CCHHHHHHHHHTT-CCCEEE----ESSCCSHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHhhCCCc-EEEEecCCcCCCccCCCchHHHHHHHHHhcc-CCcEEE----ECCCCCHHHHHHHHHcCCCEEE
Confidence 666666666653322 344556678888554 55778889898865 367777 78888554 5555999999874
Q ss_pred c
Q 018252 352 P 352 (359)
Q Consensus 352 ~ 352 (359)
+
T Consensus 233 V 233 (268)
T 1qop_A 233 S 233 (268)
T ss_dssp E
T ss_pred E
Confidence 3
No 24
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.12 E-value=1e-05 Score=72.56 Aligned_cols=170 Identities=13% Similarity=0.123 Sum_probs=109.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc-CCCeEEE---EeCChHh-HHHHHHcCCCEE
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPV---LTPNLKG-FEAAIAAGAKEV 218 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~-~~~~l~~---l~~n~~g-ie~a~~aGv~~V 218 (359)
..+.++.+++++.|. .|++.||+|.+-+ +....++++.+++. ++..+.+ +.+..+. ++.+.++|++.|
T Consensus 9 ~~~~~~~~~~~~~~~-~~~diie~G~p~~------~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v 81 (211)
T 3f4w_A 9 ELTLPEAMVFMDKVV-DDVDIIEVGTPFL------IREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYV 81 (211)
T ss_dssp SCCHHHHHHHHHHHG-GGCSEEEECHHHH------HHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHhh-cCccEEEeCcHHH------HhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEE
Confidence 356889999999996 6999999997311 11112345666654 5655532 1233443 899999999998
Q ss_pred EEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC
Q 018252 219 AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298 (359)
Q Consensus 219 ~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~D 298 (359)
.+.....+ +.+.++++.++++|+++...+ .+ ..++ .+.++.+.++|+|.|++-
T Consensus 82 ~v~~~~~~---------------~~~~~~~~~~~~~g~~~~v~~----~~----~~t~---~~~~~~~~~~g~d~i~v~- 134 (211)
T 3f4w_A 82 TVLGVTDV---------------LTIQSCIRAAKEAGKQVVVDM----IC----VDDL---PARVRLLEEAGADMLAVH- 134 (211)
T ss_dssp EEETTSCH---------------HHHHHHHHHHHHHTCEEEEEC----TT----CSSH---HHHHHHHHHHTCCEEEEE-
T ss_pred EEeCCCCh---------------hHHHHHHHHHHHcCCeEEEEe----cC----CCCH---HHHHHHHHHcCCCEEEEc-
Confidence 88643211 234577788888898874321 12 2233 456777888999998763
Q ss_pred CCCCC---cHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 299 TIGVG---TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 299 T~G~~---~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
.|.. .+....+.++.+++.++++++.+ +-|....|+..++++||+.|=+
T Consensus 135 -~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~----~gGI~~~~~~~~~~~Gad~vvv 186 (211)
T 3f4w_A 135 -TGTDQQAAGRKPIDDLITMLKVRRKARIAV----AGGISSQTVKDYALLGPDVVIV 186 (211)
T ss_dssp -CCHHHHHTTCCSHHHHHHHHHHCSSCEEEE----ESSCCTTTHHHHHTTCCSEEEE
T ss_pred -CCCcccccCCCCHHHHHHHHHHcCCCcEEE----ECCCCHHHHHHHHHcCCCEEEE
Confidence 2311 11123467778888776677766 4566667888999999998743
No 25
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.98 E-value=0.00016 Score=67.18 Aligned_cols=176 Identities=16% Similarity=0.148 Sum_probs=109.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccC-CCCCc-CCC-----------CCHHH---HHHHhhhcCCCeEEEEeC-Ch---
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFV-SPKWV-PQL-----------ADARD---VMEAVRDLEGARLPVLTP-NL--- 204 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fv-spk~v-Pq~-----------~D~~e---v~~~l~~~~~~~l~~l~~-n~--- 204 (359)
++.+...++++.|.++|++.||+|.+. .|-.- |.. .+..+ +.+.+++..++.+..+.. |.
T Consensus 29 ~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~ 108 (262)
T 1rd5_A 29 PDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMF 108 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCSHHHHS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHH
Confidence 456899999999999999999999743 22100 000 02232 233344444555655542 43
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
.+++.+.++|++.|.+..-. ++.+.++++.++++|++....++ | .++.+.+.++.+
T Consensus 109 ~~~~~a~~aGadgv~v~d~~----------------~~~~~~~~~~~~~~g~~~i~~~a-----~---~t~~e~~~~~~~ 164 (262)
T 1rd5_A 109 RSLAKMKEAGVHGLIVPDLP----------------YVAAHSLWSEAKNNNLELVLLTT-----P---AIPEDRMKEITK 164 (262)
T ss_dssp CCTHHHHHTTCCEEECTTCB----------------TTTHHHHHHHHHHTTCEECEEEC-----T---TSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCC----------------hhhHHHHHHHHHHcCCceEEEEC-----C---CCCHHHHHHHHh
Confidence 36778999999988873211 12345677788999998533222 1 345555444443
Q ss_pred HHHHCCcCEEE---EcCCCCC--CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEEece
Q 018252 285 ELHDMGCFEIS---LGDTIGV--GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHAKPC 353 (359)
Q Consensus 285 ~l~~~Gad~I~---L~DT~G~--~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~ID~t 353 (359)
. +.+-++ +..+.|. ..+....++++.+++..+ ++|.+ +.|.. ..|+.+.+++||+.|-+.
T Consensus 165 ~----~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~-~pI~v----gGGI~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 165 A----SEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTN-KPVAV----GFGISKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp H----CCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCS-SCEEE----ESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred c----CCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcC-CeEEE----ECCcCCHHHHHHHHHcCCCEEEEC
Confidence 2 333333 3444565 335667788999998753 56776 78888 778888888999988654
No 26
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=97.89 E-value=0.00085 Score=64.19 Aligned_cols=194 Identities=16% Similarity=0.079 Sum_probs=126.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC---ChHhHHHHHHcCCCEEE
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP---NLKGFEAAIAAGAKEVA 219 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~---n~~gie~a~~aGv~~V~ 219 (359)
..++.++.++.++.+.+.|++.|-++..-.|.. + ..+..++++.+++. +..+. +.. +.+.++...++|++.+.
T Consensus 82 ~~ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~-~-~~~~~~li~~i~~~-~~~i~-~s~g~l~~e~l~~L~~ag~~~v~ 157 (348)
T 3iix_A 82 YRMTPEEIVERARLAVQFGAKTIVLQSGEDPYX-M-PDVISDIVKEIKKM-GVAVT-LSLGEWPREYYEKWKEAGADRYL 157 (348)
T ss_dssp CBCCHHHHHHHHHHHHHTTCSEEEEEESCCGGG-T-THHHHHHHHHHHTT-SCEEE-EECCCCCHHHHHHHHHHTCCEEE
T ss_pred eeCCHHHHHHHHHHHHHCCCCEEEEEeCCCCCc-c-HHHHHHHHHHHHhc-CceEE-EecCCCCHHHHHHHHHhCCCEEe
Confidence 357999999999999999999998865432211 0 12234444555444 55554 222 45778888999999998
Q ss_pred EecCCc--hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE-
Q 018252 220 IFASAS--EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL- 296 (359)
Q Consensus 220 i~~s~S--~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L- 296 (359)
+.+-.. +.+...+-+.+ .+.+.+.++.+++.|+.+...+. +|.|. -+.+.+.+.++.+.+.|++.+.+
T Consensus 158 i~let~~~~~~~~i~~~~~----~~~~~~~i~~~~~~Gi~v~~~~i--~G~p~---et~e~~~~~~~~l~~l~~~~i~i~ 228 (348)
T 3iix_A 158 LRHETANPVLHRKLRPDTS----FENRLNCLLTLKELGYETGAGSM--VGLPG---QTIDDLVDDLLFLKEHDFDMVGIG 228 (348)
T ss_dssp CCCBCSCHHHHHHHSTTSC----HHHHHHHHHHHHHTTCEEEECBE--ESCTT---CCHHHHHHHHHHHHHHTCSEECCE
T ss_pred eeeeeCCHHHHHHhCCCcC----HHHHHHHHHHHHHhCCeeccceE--EeCCC---CCHHHHHHHHHHHHhcCCCEEeee
Confidence 766444 33333222334 45566777888999998766554 66543 37888888999898888886543
Q ss_pred -----cCCC----CCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCC---cHHHHHHHHHHcCCCEEece
Q 018252 297 -----GDTI----GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG---QSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 297 -----~DT~----G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~G---LAlANalaAv~AGa~~ID~t 353 (359)
++|- ...++.++.++++.++..+|.+.|-. +-+ ++-.....|+.+||+.|-..
T Consensus 229 ~~~p~~gt~l~~~~~~~~~e~~~~~a~~R~~lp~~~i~~----~~~~~~~~~~~~~~~l~~Gan~i~~~ 293 (348)
T 3iix_A 229 PFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPA----TTAMGTIVPGGREITLRCGANVIMPN 293 (348)
T ss_dssp ECCCCTTSTTTTSCCCCHHHHHHHHHHHHHHSTTSBCBC----CHHHHHHSTTHHHHHHTTTCCEECCB
T ss_pred eeecCCCCCcccCCCCCHHHHHHHHHHHHHHCCCCCchh----cchhhhcCHHHHHHHHhcCCcEEeCC
Confidence 3332 23457888899998888888743321 111 11234567899999998633
No 27
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=97.68 E-value=0.0014 Score=63.48 Aligned_cols=203 Identities=14% Similarity=0.128 Sum_probs=134.4
Q ss_pred ccCCCCC--CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHH-HHHHhhhcCCCeEEEEeC---ChHhHHH
Q 018252 136 DGLQNEK--NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARD-VMEAVRDLEGARLPVLTP---NLKGFEA 209 (359)
Q Consensus 136 DG~Q~~~--~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~e-v~~~l~~~~~~~l~~l~~---n~~gie~ 209 (359)
.+.+..+ +....+....++++-.+++-+.|=-.+...-++.+ ...... +...++...++.+..... +.+.+.+
T Consensus 15 ~~~yAV~AfNv~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g-~~~~~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ 93 (323)
T 2isw_A 15 KHKYGVGAFNVNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSD-MIYLKKLCEAALEKHPDIPICIHLDHGDTLESVKM 93 (323)
T ss_dssp HTTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTT-THHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHH
T ss_pred HCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHHhCC-HHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHH
Confidence 3444443 45668999999999999999997443321111100 011112 222222225566666554 5678999
Q ss_pred HHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC-----CCCCHHHHHHHHH
Q 018252 210 AIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE-----GAIPPSKVAYVAK 284 (359)
Q Consensus 210 a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~-----~r~~~e~l~~~a~ 284 (359)
++++|...|.+=.| ..+.+|+++..++++++|+..|+.|.+.|-..-|.+++ -.++|++..++++
T Consensus 94 ai~~GFtSVMiDgS----------~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~ 163 (323)
T 2isw_A 94 AIDLGFSSVMIDAS----------HHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVE 163 (323)
T ss_dssp HHHTTCSEEEECCT----------TSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCCCHHHHHHHHH
T ss_pred HHHcCCCeEEecCC----------CCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccCCHHHHHHHHH
Confidence 99999998877433 23568899999999999999999999888765443432 2489999888887
Q ss_pred HHHHCCcCEEEE--cCCCCCCc-HHHHH-----HHHHHHHHhCCCceEEEEe-------------------CCCCCcHHH
Q 018252 285 ELHDMGCFEISL--GDTIGVGT-PGTVV-----PMLEAVMAVVPVEKLAVHL-------------------HDTYGQSLP 337 (359)
Q Consensus 285 ~l~~~Gad~I~L--~DT~G~~~-P~~v~-----~lv~~l~~~~p~~~L~~H~-------------------HNd~GLAlA 337 (359)
+ .|+|.+.+ .-.=|.-. |.... ++++.+++.++ ++|.+|+ +++.|....
T Consensus 164 ~---TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~-vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e 239 (323)
T 2isw_A 164 L---TGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTG-IPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIE 239 (323)
T ss_dssp H---HCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHC-SCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHH
T ss_pred H---HCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhC-CCeEEECCCCCCHHHHHHHHHhccccccCCCCCHH
Confidence 5 58985433 33334332 22222 67888888875 7999999 458899999
Q ss_pred HHHHHHHcCCCEEece
Q 018252 338 NILISLQVSPMHAKPC 353 (359)
Q Consensus 338 NalaAv~AGa~~ID~t 353 (359)
....|++.|+.-|+..
T Consensus 240 ~i~~ai~~GV~KiNi~ 255 (323)
T 2isw_A 240 SIVHAIGEGVCKINVD 255 (323)
T ss_dssp HHHHHHHTTEEEEEEC
T ss_pred HHHHHHHCCCeEEEEC
Confidence 9999999999888753
No 28
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.56 E-value=0.00095 Score=62.57 Aligned_cols=172 Identities=16% Similarity=0.128 Sum_probs=106.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEecc-CCCCC-cCCCC-----------CHHHHHHHhhhcC-CCeEEEEeC-Ch---Hh
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSF-VSPKW-VPQLA-----------DARDVMEAVRDLE-GARLPVLTP-NL---KG 206 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~f-vspk~-vPq~~-----------D~~ev~~~l~~~~-~~~l~~l~~-n~---~g 206 (359)
-+.+.-+++++.|.++|.|.||+|.| ..|-+ .|... ..+.+++.+++.. .+.+..++= |. .|
T Consensus 25 P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G 104 (252)
T 3tha_A 25 PNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYG 104 (252)
T ss_dssp SCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhh
Confidence 45889999999999999999999985 44421 11111 2245666666543 244444442 42 24
Q ss_pred ----HHHHHHcCCCEEEEec-CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 018252 207 ----FEAAIAAGAKEVAIFA-SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY 281 (359)
Q Consensus 207 ----ie~a~~aGv~~V~i~~-s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~ 281 (359)
++.+.++|++.+-+.. | . +...+..+.++++|+....-++ | .++++.+.+
T Consensus 105 ~e~F~~~~~~aGvdG~IipDLP-------------~----eE~~~~~~~~~~~Gl~~I~lva-----P---~t~~eRi~~ 159 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVPELS-------------F----EESDDLIKECERYNIALITLVS-----V---TTPKERVKK 159 (252)
T ss_dssp HHHHHHHHHHTTEEEEECTTCC-------------G----GGCHHHHHHHHHTTCEECEEEE-----T---TSCHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCCCC-------------H----HHHHHHHHHHHHcCCeEEEEeC-----C---CCcHHHHHH
Confidence 4567789999877642 2 1 2244677888999998633222 1 234555444
Q ss_pred HHHHHHHCCcCEEEE---cCCCCCCcH--HHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEE
Q 018252 282 VAKELHDMGCFEISL---GDTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L---~DT~G~~~P--~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~I 350 (359)
+++ .+-.-|++ .-+.|...+ ..+.++++.+|+... .|+.+ .+|.......+++..+||.|
T Consensus 160 ia~----~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~-~Pv~v----GfGIst~e~a~~~~~~ADGV 224 (252)
T 3tha_A 160 LVK----HAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTN-LPIFV----GFGIQNNQDVKRMRKVADGV 224 (252)
T ss_dssp HHT----TCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCC-SCEEE----ESSCCSHHHHHHHTTTSSEE
T ss_pred HHH----hCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcC-CcEEE----EcCcCCHHHHHHHHhcCCEE
Confidence 443 33333444 456676653 467899999998753 56766 45666677777777777765
No 29
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.43 E-value=0.0024 Score=58.54 Aligned_cols=152 Identities=17% Similarity=0.157 Sum_probs=105.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhh-hcCCCeEE-EEeCChHhHHHHHHcCCCEEEEe
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR-DLEGARLP-VLTPNLKGFEAAIAAGAKEVAIF 221 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~-~~~~~~l~-~l~~n~~gie~a~~aGv~~V~i~ 221 (359)
..+.++-+++++.|.+.|++.||+++- +| ++.+.++.++ +.++..+= +-+-+.++++.++++|.+-|-.
T Consensus 21 ~~~~~~a~~~a~al~~gGi~~iEvt~~-t~-------~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs- 91 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEVTLR-TE-------AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS- 91 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEETT-ST-------THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE-
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCC-Cc-------cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe-
Confidence 356789999999999999999999873 22 4445555555 45665442 2234789999999999987633
Q ss_pred cCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCC------cEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEE
Q 018252 222 ASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI------PVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEIS 295 (359)
Q Consensus 222 ~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~------~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~ 295 (359)
| .+ + .+++++++++|+ .+..- -.+|+++. .+.++|+|.|.
T Consensus 92 -P---~~-------~--------~evi~~~~~~~v~~~~~~~~~PG-----------~~TptE~~----~A~~~Gad~vK 137 (217)
T 3lab_A 92 -P---GL-------T--------PELIEKAKQVKLDGQWQGVFLPG-----------VATASEVM----IAAQAGITQLK 137 (217)
T ss_dssp -S---SC-------C--------HHHHHHHHHHHHHCSCCCEEEEE-----------ECSHHHHH----HHHHTTCCEEE
T ss_pred -C---CC-------c--------HHHHHHHHHcCCCccCCCeEeCC-----------CCCHHHHH----HHHHcCCCEEE
Confidence 2 11 1 166788888888 65322 24666543 35779999997
Q ss_pred EcCCCCCCcHHHH---HHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCE
Q 018252 296 LGDTIGVGTPGTV---VPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMH 349 (359)
Q Consensus 296 L~DT~G~~~P~~v---~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ 349 (359)
+ .|.+. .+++++++.-+|++++-.=+ |....|+-..+++|+..
T Consensus 138 ~-------FPa~~~gG~~~lkal~~p~p~i~~~ptG----GI~~~N~~~~l~aGa~~ 183 (217)
T 3lab_A 138 C-------FPASAIGGAKLLKAWSGPFPDIQFCPTG----GISKDNYKEYLGLPNVI 183 (217)
T ss_dssp E-------TTTTTTTHHHHHHHHHTTCTTCEEEEBS----SCCTTTHHHHHHSTTBC
T ss_pred E-------CccccccCHHHHHHHHhhhcCceEEEeC----CCCHHHHHHHHHCCCEE
Confidence 6 35442 48899999988887776544 34456888889999754
No 30
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=97.42 E-value=0.031 Score=54.08 Aligned_cols=191 Identities=12% Similarity=0.018 Sum_probs=122.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccC-CCCCcCCCCCHHHHHHHhhhc--CCCeEEEEeC---ChHhHHHHHHcCCC
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVPQLADARDVMEAVRDL--EGARLPVLTP---NLKGFEAAIAAGAK 216 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fv-spk~vPq~~D~~ev~~~l~~~--~~~~l~~l~~---n~~gie~a~~aGv~ 216 (359)
..++.++.++.++.+.+.|++.|-++... .|. ..+.+.+.+.++.+ .+.++. +++ +.+.++...++|++
T Consensus 97 ~~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~----~~~~~~l~~ll~~ik~~g~~i~-~t~G~l~~e~l~~L~~aGvd 171 (369)
T 1r30_A 97 RLMEVEQVLESARKAKAAGSTRFCMGAAWKNPH----ERDMPYLEQMVQGVKAMGLEAC-MTLGTLSESQAQRLANAGLD 171 (369)
T ss_dssp CCCCHHHHHHHHHHHHHTTCSEEEEEECCSSCC----TTTHHHHHHHHHHHHHTTSEEE-EECSSCCHHHHHHHHHHCCC
T ss_pred ccCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCC----cCCHHHHHHHHHHHHHcCCeEE-EecCCCCHHHHHHHHHCCCC
Confidence 34789999999999999999998886421 221 12444444444432 355654 344 34678888899999
Q ss_pred EEEEecCCchHHHHhhhc-CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCC--cCE
Q 018252 217 EVAIFASASEAFSKSNIN-CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG--CFE 293 (359)
Q Consensus 217 ~V~i~~s~S~~~~~~n~~-~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~G--ad~ 293 (359)
.+.+-+..++-..+...+ .+. +.+.+.++.+++.|+.+...+. +|. .-+.+.+.+.++.+.+.+ ++.
T Consensus 172 ~v~i~les~~e~~~~i~~~~~~----~~~l~~i~~a~~~Gi~v~~~~I--~Gl----~et~ed~~~~l~~l~~l~~~~~~ 241 (369)
T 1r30_A 172 YYNHNLDTSPEFYGNIITTRTY----QERLDTLEKVRDAGIKVCSGGI--VGL----GETVKDRAGLLLQLANLPTPPES 241 (369)
T ss_dssp EEECCCBSCHHHHHHHCCSSCH----HHHHHHHHHHHHHHCEEECCEE--ECS----SCCHHHHHHHHHHHHSSSSCCSE
T ss_pred EEeecCcCCHHHHHHhCCCCCH----HHHHHHHHHHHHcCCeeeeeeE--eeC----CCCHHHHHHHHHHHHhhcCCCCE
Confidence 999877655443332222 344 4455667778888997765554 553 136788999999999988 777
Q ss_pred EEE------cCC----CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCC-CcHHHHHHHHHHcCCCEE
Q 018252 294 ISL------GDT----IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY-GQSLPNILISLQVSPMHA 350 (359)
Q Consensus 294 I~L------~DT----~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~-GLAlANalaAv~AGa~~I 350 (359)
|.+ ++| ....++.++.++++..+..+|... .|.=.-+ .++-.....++.+||+.+
T Consensus 242 i~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~~~--i~i~~~~~~l~~~~~~~~l~~Gan~~ 307 (369)
T 1r30_A 242 VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSY--VRLSAGREQMNEQTQAMCFMAGANSI 307 (369)
T ss_dssp EEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTSE--EEEESSGGGSCHHHHHHHHHHTCCEE
T ss_pred EEeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCCCc--eEeecchhhcChHHHHHHhhCCCceE
Confidence 654 333 123467888889998888888632 2211100 122334667899999954
No 31
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=97.40 E-value=0.0068 Score=57.81 Aligned_cols=198 Identities=16% Similarity=0.126 Sum_probs=133.7
Q ss_pred cCCCCC--CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHH---HHHhhh--cCCCeEEEEeC---ChHh
Q 018252 137 GLQNEK--NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDV---MEAVRD--LEGARLPVLTP---NLKG 206 (359)
Q Consensus 137 G~Q~~~--~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev---~~~l~~--~~~~~l~~l~~---n~~g 206 (359)
+.+..+ +....+....+++.-.+.+-+.|=-.+...-++ +...+.+ ...+.+ ...+.+..... +.+.
T Consensus 19 ~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~~~~~~---~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~ 95 (288)
T 3q94_A 19 GKYAVGQFNMNNLEWTQAILAAAEEEKSPVILGVSEGAARH---MTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEK 95 (288)
T ss_dssp HTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHH---TSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHH
T ss_pred CCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhhhhh---cCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHH
Confidence 445543 446789999999999999999874333111010 1122222 222223 34555555543 5688
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC------CCCCHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE------GAIPPSKVA 280 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~------~r~~~e~l~ 280 (359)
+.+|+++|...|.+=.|. .+.+|+++..++++++|+..|+.|.+.|-..=|.++. ..++|++..
T Consensus 96 i~~ai~~GFtSVMiDgS~----------~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~ 165 (288)
T 3q94_A 96 CKEAIDAGFTSVMIDASH----------HPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECK 165 (288)
T ss_dssp HHHHHHHTCSEEEECCTT----------SCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHH
T ss_pred HHHHHHcCCCeEEEeCCC----------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHH
Confidence 999999999998884332 3568899999999999999999999888765445443 258999988
Q ss_pred HHHHHHHHCCcCEEEEc--CCCCCC--cHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 281 YVAKELHDMGCFEISLG--DTIGVG--TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 281 ~~a~~l~~~Gad~I~L~--DT~G~~--~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
++++ +.|+|.+.++ -.=|.- .|.-=.++++.+++.+| +||.+|+=. |........|++.|+.-|+..
T Consensus 166 ~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~-vpLVlHGgS--G~~~e~i~~ai~~Gv~KiNi~ 236 (288)
T 3q94_A 166 HLVE---ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTG-VPLVLHGGT--GIPTADIEKAISLGTSKINVN 236 (288)
T ss_dssp HHHH---HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHC-SCEEECCCT--TCCHHHHHHHHHTTEEEEEEC
T ss_pred HHHH---HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcC-CCEEEeCCC--CCCHHHHHHHHHcCCeEEEEC
Confidence 8776 4588854443 222221 13333466777788777 789988754 888899999999999988754
No 32
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=97.39 E-value=0.0056 Score=58.81 Aligned_cols=195 Identities=18% Similarity=0.153 Sum_probs=136.2
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC---ChHhHHHHHHcCCCEEE
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP---NLKGFEAAIAAGAKEVA 219 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~---n~~gie~a~~aGv~~V~ 219 (359)
+....+....++++-.+++-+.|=-.+...-++.+ ......+...+.+ .++.+..... +.+.+.+|+++|...|.
T Consensus 23 Nv~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g-~~~~~~~v~~~a~-~~VPValHlDHg~~~e~~~~ai~~GFtSVM 100 (305)
T 1rvg_A 23 NVNNMEFLQAVLEAAEEQRSPVILALSEGAMKYGG-RALTLMAVELAKE-ARVPVAVHLDHGSSYESVLRALRAGFTSVM 100 (305)
T ss_dssp ECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHH-HHHHHHHHHHHHH-CSSCEEEEEEEECSHHHHHHHHHTTCSEEE
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEECChhHHhhCC-HHHHHHHHHHHHh-CCCcEEEECCCCCCHHHHHHHHHcCCCeee
Confidence 44668899999999999999987444321101000 0011122222234 5566655553 56889999999999988
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC--------CCCCHHHHHHHHHHHHHCCc
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE--------GAIPPSKVAYVAKELHDMGC 291 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~--------~r~~~e~l~~~a~~l~~~Ga 291 (359)
+=.| ..+.+|+++..++++++|+..|+.|.+.|-..=|.++. -.++|++..+++++. |+
T Consensus 101 iDgS----------~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~T---gv 167 (305)
T 1rvg_A 101 IDKS----------HEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERT---GA 167 (305)
T ss_dssp ECCT----------TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHH---CC
T ss_pred eCCC----------CCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHH---CC
Confidence 7433 23568999999999999999999999988865444542 138999988888764 89
Q ss_pred CEEEE--cCCCCCCc----HHHHHHHHHHHHHhCCCceEEEEeCC-------------------CCCcHHHHHHHHHHcC
Q 018252 292 FEISL--GDTIGVGT----PGTVVPMLEAVMAVVPVEKLAVHLHD-------------------TYGQSLPNILISLQVS 346 (359)
Q Consensus 292 d~I~L--~DT~G~~~----P~~v~~lv~~l~~~~p~~~L~~H~HN-------------------d~GLAlANalaAv~AG 346 (359)
|.+.+ .-.=|.-. |.-=.++++.+++.+| ++|.+|+=. ++|........|++.|
T Consensus 168 D~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~-vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~G 246 (305)
T 1rvg_A 168 DYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP-APLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLG 246 (305)
T ss_dssp SEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCC-SCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHHTT
T ss_pred CEEEEecCccccccCCCCCCccCHHHHHHHHHhcC-CCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHHHHHHCC
Confidence 85433 34434433 3333578888999988 799999976 6799999999999999
Q ss_pred CCEEece
Q 018252 347 PMHAKPC 353 (359)
Q Consensus 347 a~~ID~t 353 (359)
+.-|+..
T Consensus 247 V~KiNi~ 253 (305)
T 1rvg_A 247 IAKINTD 253 (305)
T ss_dssp EEEEEEC
T ss_pred CeEEEEC
Confidence 9888753
No 33
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.36 E-value=0.0029 Score=58.59 Aligned_cols=151 Identities=22% Similarity=0.186 Sum_probs=104.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh-cCCCeEE-EEeCChHhHHHHHHcCCCEEEEec
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLP-VLTPNLKGFEAAIAAGAKEVAIFA 222 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~-~~~~~l~-~l~~n~~gie~a~~aGv~~V~i~~ 222 (359)
-+.++-++++++|.+.|++.||+.+- +| ++.+.++.+++ .++..+- +-+.+.++++.++++|.+-|..
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~-t~-------~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvs-- 112 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFR-SD-------AAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVS-- 112 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT-ST-------THHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEEC--
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC-CC-------CHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEe--
Confidence 45678999999999999999999873 22 34555565553 5665442 2234778999999999998753
Q ss_pred CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC
Q 018252 223 SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGV 302 (359)
Q Consensus 223 s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~ 302 (359)
| .+ + .+++++++++|+.+..- -.+|+++. .+.++|+|.|.+
T Consensus 113 P---~~-------~--------~~vi~~~~~~gi~~ipG-----------v~TptEi~----~A~~~Gad~vK~------ 153 (232)
T 4e38_A 113 P---GF-------N--------PNTVRACQEIGIDIVPG-----------VNNPSTVE----AALEMGLTTLKF------ 153 (232)
T ss_dssp S---SC-------C--------HHHHHHHHHHTCEEECE-----------ECSHHHHH----HHHHTTCCEEEE------
T ss_pred C---CC-------C--------HHHHHHHHHcCCCEEcC-----------CCCHHHHH----HHHHcCCCEEEE------
Confidence 2 11 1 25677788889976321 23666543 346799999887
Q ss_pred CcHHHH---HHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCE
Q 018252 303 GTPGTV---VPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMH 349 (359)
Q Consensus 303 ~~P~~v---~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ 349 (359)
.|.+. .+++++++.-+|++++-. +=|....|+-..+++|+..
T Consensus 154 -FPa~~~gG~~~lkal~~p~p~ip~~p----tGGI~~~n~~~~l~aGa~~ 198 (232)
T 4e38_A 154 -FPAEASGGISMVKSLVGPYGDIRLMP----TGGITPSNIDNYLAIPQVL 198 (232)
T ss_dssp -CSTTTTTHHHHHHHHHTTCTTCEEEE----BSSCCTTTHHHHHTSTTBC
T ss_pred -CcCccccCHHHHHHHHHHhcCCCeee----EcCCCHHHHHHHHHCCCeE
Confidence 22211 278888998888777765 4455667899999999764
No 34
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=97.25 E-value=0.027 Score=49.80 Aligned_cols=156 Identities=17% Similarity=0.195 Sum_probs=102.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc-C-CCeEEE-EeCChHhHHHHHHcCCCEEEEe
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-E-GARLPV-LTPNLKGFEAAIAAGAKEVAIF 221 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~-~-~~~l~~-l~~n~~gie~a~~aGv~~V~i~ 221 (359)
.+.++-.++++.+.+.|++.||+..-. + +..+.++.+++. + +..+-+ .+.+...++.++++|+|.| +
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~-~-------~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v- 88 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTV-P-------DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-V- 88 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTS-T-------THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-E-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC-h-------hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-E-
Confidence 567888999999999999999998632 1 334445666543 3 444433 3467888999999999998 3
Q ss_pred cCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCC
Q 018252 222 ASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIG 301 (359)
Q Consensus 222 ~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G 301 (359)
.+. | + .++++.+++.|+.+.. + -.++++ ++.+.++|+|.|.+-.
T Consensus 89 ~~~---~-------~--------~~~~~~~~~~g~~vi~------g-----~~t~~e----~~~a~~~Gad~vk~~~--- 132 (205)
T 1wa3_A 89 SPH---L-------D--------EEISQFCKEKGVFYMP------G-----VMTPTE----LVKAMKLGHTILKLFP--- 132 (205)
T ss_dssp CSS---C-------C--------HHHHHHHHHHTCEEEC------E-----ECSHHH----HHHHHHTTCCEEEETT---
T ss_pred cCC---C-------C--------HHHHHHHHHcCCcEEC------C-----cCCHHH----HHHHHHcCCCEEEEcC---
Confidence 232 1 1 1466778888998732 1 124554 4456789999887632
Q ss_pred CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 302 VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 302 ~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
..+. -.++++.+++.+|++++..=+-=+ ..|+...+++||+.|-+
T Consensus 133 -~~~~-g~~~~~~l~~~~~~~pvia~GGI~----~~~~~~~~~~Ga~~v~v 177 (205)
T 1wa3_A 133 -GEVV-GPQFVKAMKGPFPNVKFVPTGGVN----LDNVCEWFKAGVLAVGV 177 (205)
T ss_dssp -HHHH-HHHHHHHHHTTCTTCEEEEBSSCC----TTTHHHHHHHTCSCEEE
T ss_pred -cccc-CHHHHHHHHHhCCCCcEEEcCCCC----HHHHHHHHHCCCCEEEE
Confidence 1112 235667777777667776654333 35888899999987754
No 35
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=97.21 E-value=0.0085 Score=57.08 Aligned_cols=189 Identities=13% Similarity=0.107 Sum_probs=128.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHh---hhcCCCeEEEEeC---ChHhHHHHHHcCCC
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAV---RDLEGARLPVLTP---NLKGFEAAIAAGAK 216 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l---~~~~~~~l~~l~~---n~~gie~a~~aGv~ 216 (359)
+....+....+++.-.+++-+.|=-.+...-++ ...+.+...+ .+..++.+..... +.+.+.+|+++|..
T Consensus 24 Nv~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y----~g~~~~~~~v~~~a~~~~VPValHlDHg~~~e~i~~ai~~GFt 99 (286)
T 1gvf_A 24 NIHNAETIQAILEVCSEMRSPVILAGTPGTFKH----IALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVR 99 (286)
T ss_dssp ECCSHHHHHHHHHHHHHHTCCCEEEECTTHHHH----SCHHHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHTTCC
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEECChhHHhh----cCHHHHHHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHHHcCCC
Confidence 446688999999999999999874433211111 1222222222 2233455555443 66889999999999
Q ss_pred EEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC--------CCCCHHHHHHHHHHHHH
Q 018252 217 EVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE--------GAIPPSKVAYVAKELHD 288 (359)
Q Consensus 217 ~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~--------~r~~~e~l~~~a~~l~~ 288 (359)
.|.+=.| ..+.+|+++..++++++|+..|+.|.+.|-..=|.++. -.++|++..+++++
T Consensus 100 SVMiDgS----------~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~--- 166 (286)
T 1gvf_A 100 SAMIDGS----------HFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVEL--- 166 (286)
T ss_dssp EEEECCT----------TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHH---
T ss_pred eEEECCC----------CCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHH---
Confidence 8877433 23468899999999999999999999888754333432 13899998888875
Q ss_pred CCcCEEEEcCCCCCC------cHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 289 MGCFEISLGDTIGVG------TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 289 ~Gad~I~L~DT~G~~------~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
.|+|.+- =++|.. .|.-=.++++.+++.++ +||.+|+= -|........|++.|+.-|+..
T Consensus 167 TgvD~LA--vaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~-vpLVlHGg--SG~~~e~i~~ai~~Gv~KiNi~ 232 (286)
T 1gvf_A 167 TGVDSLA--VAIGTAHGLYSKTPKIDFQRLAEIREVVD-VPLVLHGA--SDVPDEFVRRTIELGVTKVNVA 232 (286)
T ss_dssp HCCSEEE--ECSSCCSSCCSSCCCCCHHHHHHHHHHCC-SCEEECCC--TTCCHHHHHHHHHTTEEEEEEC
T ss_pred HCCCEEE--eecCccccCcCCCCccCHHHHHHHHHhcC-CCEEEECC--CCCCHHHHHHHHHCCCeEEEEC
Confidence 5898443 334433 24434567888888877 78988874 4778889999999999888754
No 36
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=97.08 E-value=0.022 Score=54.37 Aligned_cols=201 Identities=16% Similarity=0.166 Sum_probs=111.3
Q ss_pred EEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEec-cCCCCC--cCCCCCHHHHHHHhhhcC--CCeEEE
Q 018252 128 KIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATS-FVSPKW--VPQLADARDVMEAVRDLE--GARLPV 199 (359)
Q Consensus 128 ~I~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~-fvspk~--vPq~~D~~ev~~~l~~~~--~~~l~~ 199 (359)
=|+.+|+ =||.+ .++.+.-++.++.+.+.|.++|++|. ...|.+ ++.-.+.+.+...++.+. ++.++.
T Consensus 33 GIlNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSI 108 (294)
T 2dqw_A 33 GVLNLTPDSFSDGGR----YLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSV 108 (294)
T ss_dssp EEEECCC-----------------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEE
T ss_pred EEEeCCCCCCCCCCC----CCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 4566654 45543 46778888999999999999999997 233322 111122333444444332 666666
Q ss_pred EeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee-cCCCC----CCC
Q 018252 200 LTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV-GCPVE----GAI 274 (359)
Q Consensus 200 l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~f-g~~~~----~r~ 274 (359)
=+.+.+-++.|+++|++.|+= +|-.. . .++++.++++|..+. +++.- |.|.. ..+
T Consensus 109 DT~~~~Va~aAl~aGa~iINd---Vsg~~--------d-------~~m~~v~a~~~~~vV--lmh~~eG~p~tm~~~~~y 168 (294)
T 2dqw_A 109 DTRKPEVAEEALKLGAHLLND---VTGLR--------D-------ERMVALAARHGVAAV--VMHMPVPDPATMMAHARY 168 (294)
T ss_dssp ECSCHHHHHHHHHHTCSEEEC---SSCSC--------C-------HHHHHHHHHHTCEEE--EECCSSSCTTTGGGGCCC
T ss_pred ECCCHHHHHHHHHhCCCEEEE---CCCCC--------C-------hHHHHHHHHhCCCEE--EEcCCCCCCccccccCcc
Confidence 667788899999999886543 22210 0 144556677787653 33221 33221 011
Q ss_pred C------HHHHHHHHHHHHHCCcCEEEEcCCCCCCc-HHHHHHHHHHHHHhC-CCceEEEEeC---------------CC
Q 018252 275 P------PSKVAYVAKELHDMGCFEISLGDTIGVGT-PGTVVPMLEAVMAVV-PVEKLAVHLH---------------DT 331 (359)
Q Consensus 275 ~------~e~l~~~a~~l~~~Gad~I~L~DT~G~~~-P~~v~~lv~~l~~~~-p~~~L~~H~H---------------Nd 331 (359)
+ .+++.+.++.+.++|+..|.|==-+|.+. .++-.++++.+++-. ++.++-+=.- +.
T Consensus 169 ~dv~~ev~~~l~~~i~~a~~~Gi~~IilDPG~Gf~kt~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfig~l~g~p~~~~R 248 (294)
T 2dqw_A 169 RDVVAEVKAFLEAQARRALSAGVPQVVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVEDPAQR 248 (294)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCSCEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHHTCCSGGGC
T ss_pred ccHHHHHHHHHHHHHHHHHHCCCCcEEEcCCCCcccCHHHHHHHHHHHHHHhcCCCCEEEEeccchhhhhhcCCCchhhh
Confidence 1 45777788888899998666543345444 556677777775421 3334333111 22
Q ss_pred CCcHHHHHHHHHHcCCCEEec
Q 018252 332 YGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 332 ~GLAlANalaAv~AGa~~ID~ 352 (359)
.....|-+..|++.|++++.+
T Consensus 249 ~~~t~a~~~~a~~~Ga~IvRv 269 (294)
T 2dqw_A 249 VHGSVAAHLFAVMKGVRLLRV 269 (294)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEc
Confidence 223357778899999998865
No 37
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.06 E-value=0.0099 Score=55.63 Aligned_cols=179 Identities=18% Similarity=0.098 Sum_probs=111.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCe----EEEEe------CCh---HhHHHHHH
Q 018252 146 PTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGAR----LPVLT------PNL---KGFEAAIA 212 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~----l~~l~------~n~---~gie~a~~ 212 (359)
+.++..++.+...+.|++.|-+-.. + .+... ..+.. +...+ ++. ..++.|++
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~~----~----------v~~~~-~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~ 103 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQRG----I----------AEKYY-DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVS 103 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECHH----H----------HHHHC-CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHH
T ss_pred chhhHHHHHHHHHhhCCCEEEECHH----H----------HHHhh-cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHH
Confidence 5677888999999999999876531 1 11111 22222 11111 111 46899999
Q ss_pred cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 213 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
.|++.|.+..-.. ..+.++.++.+.++.+.++++|+++... +..-|.......+++.+.+.++.+.++|+|
T Consensus 104 ~Ga~~v~~~~nig--------~~~~~~~~~~~~~v~~~~~~~~~~vIi~-~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD 174 (263)
T 1w8s_A 104 LGASAVGYTIYPG--------SGFEWKMFEELARIKRDAVKFDLPLVVE-SFPRGGKVVNETAPEIVAYAARIALELGAD 174 (263)
T ss_dssp TTCSEEEEEECTT--------STTHHHHHHHHHHHHHHHHHHTCCEEEE-ECCCSTTCCCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEEEecC--------CcCHHHHHHHHHHHHHHHHHcCCeEEEE-eeCCCCccccCCCHHHHHHHHHHHHHcCCC
Confidence 9999988855111 1234678889999999999999987432 111111011112778888889999999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 293 EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 293 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
-|... +.| +|+.++++.+.. ...|.+.++-=-.+|.-.+++|.-.++++||+.+-+
T Consensus 175 ~vkt~-~~~--~~e~~~~~~~~~-~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsv 230 (263)
T 1w8s_A 175 AMKIK-YTG--DPKTFSWAVKVA-GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAV 230 (263)
T ss_dssp EEEEE-CCS--SHHHHHHHHHHT-TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEc-CCC--CHHHHHHHHHhC-CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 98888 432 566666655443 222422222111127778899999999999985543
No 38
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=97.05 E-value=0.018 Score=56.97 Aligned_cols=183 Identities=11% Similarity=0.066 Sum_probs=120.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEecc-----CCCCC--cC----------------CCCCHHHHHHHhh---hcCCCe
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSF-----VSPKW--VP----------------QLADARDVMEAVR---DLEGAR 196 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~f-----vspk~--vP----------------q~~D~~ev~~~l~---~~~~~~ 196 (359)
..=+.+.-+++++...++|.+.|=.+.| ++|.. +- .+ ..++ +..+. +-.++.
T Consensus 39 H~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l-~~e~-~~~L~~~~~~~Gi~ 116 (385)
T 1vli_A 39 HDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEM-PAEW-ILPLLDYCREKQVI 116 (385)
T ss_dssp TTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSS-CGGG-HHHHHHHHHHTTCE
T ss_pred ccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCC-CHHH-HHHHHHHHHHcCCc
Confidence 3458899999999999999999999864 24432 10 01 1111 11121 223444
Q ss_pred EEEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH
Q 018252 197 LPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 276 (359)
Q Consensus 197 l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~ 276 (359)
+..=.-+...++...+.|++.+.|-.. ...| + ++++++.+.|.+|. |+ .|..+.
T Consensus 117 ~~stpfD~~svd~l~~~~vd~~KIgS~-----~~~N--------~----pLL~~va~~gKPVi--LS-------tGmaTl 170 (385)
T 1vli_A 117 FLSTVCDEGSADLLQSTSPSAFKIASY-----EINH--------L----PLLKYVARLNRPMI--FS-------TAGAEI 170 (385)
T ss_dssp EECBCCSHHHHHHHHTTCCSCEEECGG-----GTTC--------H----HHHHHHHTTCSCEE--EE-------CTTCCH
T ss_pred EEEccCCHHHHHHHHhcCCCEEEECcc-----cccC--------H----HHHHHHHhcCCeEE--EE-------CCCCCH
Confidence 333223668888887788888888421 1122 1 45666666788873 22 235699
Q ss_pred HHHHHHHHHHHHCCcCEEEEcC-CCCCCcHHHHHHH--HHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 277 SKVAYVAKELHDMGCFEISLGD-TIGVGTPGTVVPM--LEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 277 e~l~~~a~~l~~~Gad~I~L~D-T~G~~~P~~v~~l--v~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
+++...++.+.+.|...|.|+- +.++=+|....+| +..+++.+|++++++=-|-. |- .+-++||+.+||++|+.=
T Consensus 171 ~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~-G~-~~~~~AAvAlGA~iIEkH 248 (385)
T 1vli_A 171 SDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSE-HP-TEAPCAAVRLGAKLIEKH 248 (385)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCS-SS-SHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCC-Cc-hHHHHHHHHcCCCEEEeC
Confidence 9999999999999997666642 4445455555555 78889999778999866652 42 778899999999999865
Q ss_pred ee
Q 018252 354 FT 355 (359)
Q Consensus 354 l~ 355 (359)
++
T Consensus 249 ft 250 (385)
T 1vli_A 249 FT 250 (385)
T ss_dssp BC
T ss_pred CC
Confidence 43
No 39
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=97.04 E-value=0.049 Score=49.52 Aligned_cols=175 Identities=15% Similarity=0.143 Sum_probs=102.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEecc-CCCCC----cC-----------CCCCHHHHHHHhhhcCCCeEEEEeC-C---
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSF-VSPKW----VP-----------QLADARDVMEAVRDLEGARLPVLTP-N--- 203 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~f-vspk~----vP-----------q~~D~~ev~~~l~~~~~~~l~~l~~-n--- 203 (359)
..+.+.-.+.++.|.+. ++.||++.+ ..|.. ++ .+....++.+.+++..+..+..++. |
T Consensus 15 ~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~ 93 (248)
T 1geq_A 15 DPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIY 93 (248)
T ss_dssp SSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhh
Confidence 34457889999999999 999999964 33221 00 0001123344444434455555552 4
Q ss_pred ----hHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHH
Q 018252 204 ----LKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKV 279 (359)
Q Consensus 204 ----~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l 279 (359)
.+.++.++++|++.|.+..-.. +....+++.++++|.++...++ + .++.+.+
T Consensus 94 ~~~~~~~~~~~~~~Gad~v~~~~~~~----------------~~~~~~~~~~~~~g~~~~~~i~-----~---~t~~e~~ 149 (248)
T 1geq_A 94 RAGVRNFLAEAKASGVDGILVVDLPV----------------FHAKEFTEIAREEGIKTVFLAA-----P---NTPDERL 149 (248)
T ss_dssp HHCHHHHHHHHHHHTCCEEEETTCCG----------------GGHHHHHHHHHHHTCEEEEEEC-----T---TCCHHHH
T ss_pred hcCHHHHHHHHHHCCCCEEEECCCCh----------------hhHHHHHHHHHHhCCCeEEEEC-----C---CCHHHHH
Confidence 3678899999999999852110 1234667788888988644332 1 1333333
Q ss_pred HHHHHHHHHCCcC-EEEEcCCCCCC-----cHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHH-HHHHHHHHcCCCEEec
Q 018252 280 AYVAKELHDMGCF-EISLGDTIGVG-----TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL-PNILISLQVSPMHAKP 352 (359)
Q Consensus 280 ~~~a~~l~~~Gad-~I~L~DT~G~~-----~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAl-ANalaAv~AGa~~ID~ 352 (359)
..+.+ +++ .|++....|.. .+....++++.+++... ++|.+ .-|... .|+...+++||+.|-+
T Consensus 150 ~~~~~-----~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~-~pi~~----~GGI~~~e~i~~~~~~Gad~viv 219 (248)
T 1geq_A 150 KVIDD-----MTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICR-NKVAV----GFGVSKREHVVSLLKEGANGVVV 219 (248)
T ss_dssp HHHHH-----HCSSEEEEECCC-------CCCHHHHHHHHHHHHHCS-SCEEE----ESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHh-----cCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcC-CCEEE----EeecCCHHHHHHHHHcCCCEEEE
Confidence 33322 245 56555544422 23455678888888653 45544 356666 7888888999998754
Q ss_pred e
Q 018252 353 C 353 (359)
Q Consensus 353 t 353 (359)
.
T Consensus 220 G 220 (248)
T 1geq_A 220 G 220 (248)
T ss_dssp C
T ss_pred c
Confidence 3
No 40
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=97.04 E-value=0.025 Score=56.95 Aligned_cols=148 Identities=14% Similarity=0.006 Sum_probs=98.9
Q ss_pred hHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEE-EEeeeecCCCC-----------
Q 018252 204 LKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRG-YVSCVVGCPVE----------- 271 (359)
Q Consensus 204 ~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~-~is~~fg~~~~----------- 271 (359)
.+.+..++++|...|++=.|..+ ...|+..|.+-..++..+++++|++.+..+.. .+..+.|.++.
T Consensus 114 ~e~i~~aI~AGFtSVMiD~S~~p--~eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtEvpvpGGa~~~~~~ 191 (450)
T 3txv_A 114 EAMITAYAKAGFTKLHLDTSMGC--AGEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTEVPIPGGALEELDT 191 (450)
T ss_dssp HHHHHHHHTTTCCEEEECCCBCC--SSSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC-------------
T ss_pred HHHHHHHHHcCCCEEEECCCCCc--hhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeeecCCCCcccccccc
Confidence 45688999999999998554433 24577888888889999999999986443310 12223444331
Q ss_pred -CCCCHHHHHHHHHH----HHHCCcC-----EEEEcCCCCCCcH-----HHHHHHHHHHHHhCCCce-EEEEeCCCCCcH
Q 018252 272 -GAIPPSKVAYVAKE----LHDMGCF-----EISLGDTIGVGTP-----GTVVPMLEAVMAVVPVEK-LAVHLHDTYGQS 335 (359)
Q Consensus 272 -~r~~~e~l~~~a~~----l~~~Gad-----~I~L~DT~G~~~P-----~~v~~lv~~l~~~~p~~~-L~~H~HNd~GLA 335 (359)
..++|+...++++. +.+.|++ .+.|+=-.|+..- .-=.+.++.|++.+++.| |.+|+|++-|+.
T Consensus 192 ~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~v~~~P~LVlhghStDy~~ 271 (450)
T 3txv_A 192 LEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSATLGQLHGMVFEAHSTDYQT 271 (450)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHGGGTSTTCEEEESCCTTCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHHhccCCCEEEecCCCCCCC
Confidence 25899988777764 4556663 4555555555431 100124445555554456 999999999999
Q ss_pred HHHHHHHHHcCCCEEece
Q 018252 336 LPNILISLQVSPMHAKPC 353 (359)
Q Consensus 336 lANalaAv~AGa~~ID~t 353 (359)
-.+...+++.|+..|.+.
T Consensus 272 ~e~l~~~V~~GiaklNVg 289 (450)
T 3txv_A 272 PDALRELVADGFAILKVG 289 (450)
T ss_dssp HHHHHHHHHTTEEEEEEC
T ss_pred HHHHHHHHHcCCcEEEEC
Confidence 999999999999998864
No 41
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.03 E-value=0.034 Score=51.43 Aligned_cols=178 Identities=11% Similarity=0.090 Sum_probs=117.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe--CC----h----HhHHHHHH
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT--PN----L----KGFEAAIA 212 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~--~n----~----~gie~a~~ 212 (359)
..-+.++..++.+...+.|+..|-+-. .++ ...+.++..+++++.+.+ |. . ..++.|++
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~p----~~v-------~a~~~l~~~~~v~v~tvigFP~G~~~~~~k~~e~~~Av~ 99 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLTP----VYT-------VKISGLAEKLGVKLCSVIGFPLGQAPLEVKLVEAQTVLE 99 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECH----HHH-------HHHHHHHHHHTCCEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEch----HHh-------eeehHhCCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 346889999999999999999886542 111 112223222257777766 41 1 36889999
Q ss_pred cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 213 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
.|+++|.+.+..... .++.++.+..+.+.+.+.|+.+..-+. .+ ..+++++...++.+.++|+|
T Consensus 100 ~GAdEID~vinig~~---------~~~v~~ei~~v~~a~~~~g~~lKvIlE--t~-----~L~~e~i~~a~ria~eaGAD 163 (234)
T 1n7k_A 100 AGATELDVVPHLSLG---------PEAVYREVSGIVKLAKSYGAVVKVILE--AP-----LWDDKTLSLLVDSSRRAGAD 163 (234)
T ss_dssp HTCCEEEECCCGGGC---------HHHHHHHHHHHHHHHHHTTCEEEEECC--GG-----GSCHHHHHHHHHHHHHTTCS
T ss_pred cCCCEEEEeccchHH---------HHHHHHHHHHHHHHHhhcCCeEEEEEe--cc-----CCCHHHHHHHHHHHHHhCCC
Confidence 999999997754332 236788889999999888886643332 21 23678999999999999999
Q ss_pred EEEEcCCC---CCCcHHHHHHHHHHHHHhCCCceEEEE--eCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 293 EISLGDTI---GVGTPGTVVPMLEAVMAVVPVEKLAVH--LHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 293 ~I~L~DT~---G~~~P~~v~~lv~~l~~~~p~~~L~~H--~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
-|--.-.. |-++++++.- +++++.++ +++-.= .+ + ...+++-+++|+++|=+|..
T Consensus 164 fVKTsTG~~~~~gAt~~dv~l--~~m~~~v~-v~VKaaGGir-t----~~~al~~i~aGa~RiG~S~g 223 (234)
T 1n7k_A 164 IVKTSTGVYTKGGDPVTVFRL--ASLAKPLG-MGVKASGGIR-S----GIDAVLAVGAGADIIGTSSA 223 (234)
T ss_dssp EEESCCSSSCCCCSHHHHHHH--HHHHGGGT-CEEEEESSCC-S----HHHHHHHHHTTCSEEEETTH
T ss_pred EEEeCCCCCCCCCCCHHHHHH--HHHHHHHC-CCEEEecCCC-C----HHHHHHHHHcCccccchHHH
Confidence 98765321 4456766554 22444333 333221 12 2 46778888999999877654
No 42
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.02 E-value=0.062 Score=50.42 Aligned_cols=192 Identities=13% Similarity=0.039 Sum_probs=122.7
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe--C---
Q 018252 128 KIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT--P--- 202 (359)
Q Consensus 128 ~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~--~--- 202 (359)
..+|-|+= +...+.++..++.+...+.|+..|-+- |.++| ...+.++ ..++.+.+.+ |
T Consensus 45 ~~IDhTlL------~p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~------~a~~~L~-gs~v~v~tVigFP~G~ 107 (260)
T 3r12_A 45 SAIEHTNL------KPFATPDDIKKLCLEARENRFHGVCVN----PCYVK------LAREELE-GTDVKVVTVVGFPLGA 107 (260)
T ss_dssp HHEEEEEC------CTTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHH------HHHHHHT-TSCCEEEEEESTTTCC
T ss_pred HhcCcccC------CCCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHH------HHHHHhc-CCCCeEEEEecCCCCC
Confidence 35666662 225788899999999999999988663 33332 2223332 3456776655 3
Q ss_pred C--h---HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHH
Q 018252 203 N--L---KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 277 (359)
Q Consensus 203 n--~---~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e 277 (359)
+ . ..++.|++.|+++|.+.+...... ....+...+.+..+.+.+. |..+.+-| +- +..+.+
T Consensus 108 ~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk-----~g~~~~v~~eI~~v~~a~~--~~~lKVIl--Et-----~~Lt~e 173 (260)
T 3r12_A 108 NETRTKAHEAIFAVESGADEIDMVINVGMLK-----AKEWEYVYEDIRSVVESVK--GKVVKVII--ET-----CYLDTE 173 (260)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHTT--TSEEEEEC--CG-----GGCCHH
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEeehhhhc-----cccHHHHHHHHHHHHHhcC--CCcEEEEE--eC-----CCCCHH
Confidence 1 1 357789999999999987643321 1245677788888877764 44443222 21 245788
Q ss_pred HHHHHHHHHHHCCcCEEEEcCC--CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 278 KVAYVAKELHDMGCFEISLGDT--IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT--~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
.+...++.+.++|+|-|--.-- .|.++++++.-+-+.+.. ++++-.----- ....+++-++|||++|=+|-.
T Consensus 174 ei~~A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~~vg~-----~v~VKaAGGIr-t~~~al~mi~aGA~RiGtS~g 247 (260)
T 3r12_A 174 EKIAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIVGD-----EMGVKASGGIR-TFEDAVKMIMYGADRIGTSSG 247 (260)
T ss_dssp HHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHCT-----TSEEEEESSCC-SHHHHHHHHHTTCSEEEESCH
T ss_pred HHHHHHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHHHhCC-----CceEEEeCCCC-CHHHHHHHHHcCCceeecchH
Confidence 9999999999999998876521 245677777666555432 23332211111 236778889999999987754
Q ss_pred e
Q 018252 356 F 356 (359)
Q Consensus 356 ~ 356 (359)
.
T Consensus 248 ~ 248 (260)
T 3r12_A 248 V 248 (260)
T ss_dssp H
T ss_pred H
Confidence 3
No 43
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=97.01 E-value=0.011 Score=56.90 Aligned_cols=193 Identities=16% Similarity=0.099 Sum_probs=129.1
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHH---HHHhhhc-CCCeEEEEeC---ChHhHHHHHHcCC
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDV---MEAVRDL-EGARLPVLTP---NLKGFEAAIAAGA 215 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev---~~~l~~~-~~~~l~~l~~---n~~gie~a~~aGv 215 (359)
+....+....++++-.+.+-+.|=-.+...-++ ...+.+ ...+.+. .++.+..... +.+.+.+|+++|.
T Consensus 23 Nv~n~e~~~avi~AAee~~sPvIlq~s~g~~~y----~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e~~~~ai~~GF 98 (307)
T 3n9r_A 23 NFVNFEMLNAIFEAGNEENSPLFIQASEGAIKY----MGIDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGF 98 (307)
T ss_dssp ECSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHH----HCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHHHHHHHHHHTC
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEEEcChhhhhh----CCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHhCC
Confidence 346788999999999999999874333111010 111222 2222222 5566655553 5688999999999
Q ss_pred CEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC--------CCCCHHHHHHHHHHHH
Q 018252 216 KEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE--------GAIPPSKVAYVAKELH 287 (359)
Q Consensus 216 ~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~--------~r~~~e~l~~~a~~l~ 287 (359)
..|.+=.|. .+.+|+++.-++++++|+..|+.|.+.|-..=|.++. ..++|++..+++++
T Consensus 99 tSVMiDgS~----------~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~-- 166 (307)
T 3n9r_A 99 TSVMIDASH----------HAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKE-- 166 (307)
T ss_dssp SEEEECCTT----------SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHH--
T ss_pred CcEEEECCC----------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHH--
Confidence 988874331 2568899999999999999999999888755444432 24799998888775
Q ss_pred HCCcCEEEEc--CCCCCC----cHHHHHHHHHHHHHhCCCceEEEEe-------------------CCCCCcHHHHHHHH
Q 018252 288 DMGCFEISLG--DTIGVG----TPGTVVPMLEAVMAVVPVEKLAVHL-------------------HDTYGQSLPNILIS 342 (359)
Q Consensus 288 ~~Gad~I~L~--DT~G~~----~P~~v~~lv~~l~~~~p~~~L~~H~-------------------HNd~GLAlANalaA 342 (359)
.|+|.+.++ -.=|.- .|.-=.++++.+++ .+++||.+|+ +++.|........|
T Consensus 167 -TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~-~~~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~a 244 (307)
T 3n9r_A 167 -SQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKR-LTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQES 244 (307)
T ss_dssp -HCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHH-HHCSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHH
T ss_pred -HCCCEEEEecCCcccccCCCCCCccCHHHHHHHHh-cCCCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHH
Confidence 589965443 333332 23323344555544 3457899997 44779999999999
Q ss_pred HHcCCCEEece
Q 018252 343 LQVSPMHAKPC 353 (359)
Q Consensus 343 v~AGa~~ID~t 353 (359)
++.|+.-|+..
T Consensus 245 i~~GV~KiNi~ 255 (307)
T 3n9r_A 245 VKGGINKVNTD 255 (307)
T ss_dssp HHTTEEEEEEC
T ss_pred HHcCceEEEec
Confidence 99999988753
No 44
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=96.97 E-value=0.076 Score=50.53 Aligned_cols=195 Identities=12% Similarity=0.047 Sum_probs=123.1
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe--CC--
Q 018252 128 KIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT--PN-- 203 (359)
Q Consensus 128 ~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~--~n-- 203 (359)
..+|-|+ .+...+.++..++.+...+.|+..|-+- |.++ ..+.+.++ ..++.+.+.+ |.
T Consensus 60 ~~IDhTl------L~p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V------~~a~~~L~-~s~V~V~tVigFP~G~ 122 (288)
T 3oa3_A 60 QIIDHTQ------LSLSATGSQIDVLCAEAKEYGFATVCVR----PDYV------SRAVQYLQ-GTQVGVTCVIGFHEGT 122 (288)
T ss_dssp GGEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEEC----GGGH------HHHHHHTT-TSSCEEEEEESTTTSC
T ss_pred HhcCccc------CCCCCCHHHHHHHHHHHHhcCCcEEEEC----HHHH------HHHHHHcC-CCCCeEEEEeCCCCCC
Confidence 4566666 2245778888899999999999888664 3222 22333332 2356776665 31
Q ss_pred ---h---HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHH
Q 018252 204 ---L---KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 277 (359)
Q Consensus 204 ---~---~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e 277 (359)
. ..++.|++.|+++|.+.+...... ....+...+.+..+.+.+.+..++| ..+- +..+.+
T Consensus 123 ~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk-----~g~~~~v~~eI~~V~~a~~~~~lKV----IlEt-----~~Lt~e 188 (288)
T 3oa3_A 123 YSTDQKVSEAKRAMQNGASELDMVMNYPWLS-----EKRYTDVFQDIRAVRLAAKDAILKV----ILET-----SQLTAD 188 (288)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHTTTSEEEE----ECCG-----GGCCHH
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEEeehhhhc-----CCcHHHHHHHHHHHHHHhcCCCceE----EEEC-----CCCCHH
Confidence 1 367889999999999987643321 2345677888888888776543333 2111 235778
Q ss_pred HHHHHHHHHHHCCcCEEEEcC--CCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 278 KVAYVAKELHDMGCFEISLGD--TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
.+...++.+.++|+|-|--.- +.|.++++++.-+ +.+.+..+. ++.+-.=---- ....+++-+++||++|=+|-.
T Consensus 189 ei~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~lm-r~~v~~~g~-~v~VKAAGGIr-t~edAl~mi~aGA~RiGtS~g 265 (288)
T 3oa3_A 189 EIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLM-SAVCDSLQS-ETRVKASGGIR-TIEDCVKMVRAGAERLGASAG 265 (288)
T ss_dssp HHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHH-HHHHHHSSS-CCEEEEESSCC-SHHHHHHHHHTTCSEEEESCH
T ss_pred HHHHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHH-HHHHHHhCC-CceEEEeCCCC-CHHHHHHHHHcCCceeehhhH
Confidence 899999999999999887662 1246788887544 444443221 23332211111 237888999999999987754
Q ss_pred e
Q 018252 356 F 356 (359)
Q Consensus 356 ~ 356 (359)
.
T Consensus 266 ~ 266 (288)
T 3oa3_A 266 V 266 (288)
T ss_dssp H
T ss_pred H
Confidence 3
No 45
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.93 E-value=0.026 Score=51.17 Aligned_cols=171 Identities=16% Similarity=0.140 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEE--EEeCCh-HhHHHHHHcCCCEEEEecCC
Q 018252 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLP--VLTPNL-KGFEAAIAAGAKEVAIFASA 224 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~--~l~~n~-~gie~a~~aGv~~V~i~~s~ 224 (359)
..-.+.++.+.++|++.|++..--. .++|.+....++.+.+++..+..+. .++-+. +-++.+.++|++.|.+..-.
T Consensus 19 ~~l~~~i~~~~~~Gad~i~l~i~Dg-~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 19 ANLAAEADRMVRLGADWLHMDIMDG-HFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEBS-SSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHHHHcCCCEEEEEEecC-CcCcchhhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEECCCC
Confidence 3455677888999999999874110 0122222223445556554343333 444343 56999999999999886543
Q ss_pred chHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHC--CcCEEEEcCCC--
Q 018252 225 SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDM--GCFEISLGDTI-- 300 (359)
Q Consensus 225 S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~--Gad~I~L~DT~-- 300 (359)
++.. +.+.++.+++.|+++...+ .| .++.+ ..+.+.+. ++|-|.+ +|+
T Consensus 98 ~~~~---------------~~~~~~~i~~~g~~igv~~-----~p---~t~~e----~~~~~~~~~~~~d~vl~-~sv~p 149 (228)
T 1h1y_A 98 SRDN---------------WQELIQSIKAKGMRPGVSL-----RP---GTPVE----EVFPLVEAENPVELVLV-MTVEP 149 (228)
T ss_dssp CTTT---------------HHHHHHHHHHTTCEEEEEE-----CT---TSCGG----GGHHHHHSSSCCSEEEE-ESSCT
T ss_pred cccH---------------HHHHHHHHHHcCCCEEEEE-----eC---CCCHH----HHHHHHhcCCCCCEEEE-EeecC
Confidence 3211 1245666778898875322 11 12322 23445555 8898877 332
Q ss_pred ---CCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 301 ---GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 301 ---G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
|...+....+.++.+++..++.+|.+ +-|....|+-.++++||+.|=
T Consensus 150 g~~g~~~~~~~l~~i~~~~~~~~~~pi~v----~GGI~~~ni~~~~~aGaD~vv 199 (228)
T 1h1y_A 150 GFGGQKFMPEMMEKVRALRKKYPSLDIEV----DGGLGPSTIDVAASAGANCIV 199 (228)
T ss_dssp TCSSCCCCGGGHHHHHHHHHHCTTSEEEE----ESSCSTTTHHHHHHHTCCEEE
T ss_pred CCCcccCCHHHHHHHHHHHHhcCCCCEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 33335566677888888775566665 457777788888999999864
No 46
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=96.90 E-value=0.025 Score=51.74 Aligned_cols=182 Identities=16% Similarity=0.076 Sum_probs=118.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe--CC----h----HhHHHHHH
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT--PN----L----KGFEAAIA 212 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~--~n----~----~gie~a~~ 212 (359)
...+.++..++.+...+.|+..|-+ +|.++| ...+.++ ..++.+.+.+ |. . ..++.|++
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv----~p~~v~------~~~~~l~-~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~ 82 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCI----PPSYVA------WVRARYP-HAPFRLVTVVGFPLGYQEKEVKALEAALACA 82 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEC----CGGGHH------HHHHHCT-TCSSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEE----CHHHHH------HHHHHhC-CCCceEEEEecCCCCCCchHHHHHHHHHHHH
Confidence 3568899999999999999988854 333222 2223332 1246665555 31 1 36789999
Q ss_pred cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 213 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
.|+++|.+.+...... ....++.++.+..+.+.+.+.+++|. + +. ...+++++...++.+.++|+|
T Consensus 83 ~GAdevd~vinig~~~-----~g~~~~v~~ei~~v~~a~~~~~lkvI--l--et-----~~l~~e~i~~a~~ia~eaGAD 148 (220)
T 1ub3_A 83 RGADEVDMVLHLGRAK-----AGDLDYLEAEVRAVREAVPQAVLKVI--L--ET-----GYFSPEEIARLAEAAIRGGAD 148 (220)
T ss_dssp TTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHSTTSEEEEE--C--CG-----GGSCHHHHHHHHHHHHHHTCS
T ss_pred cCCCEEEecccchhhh-----CCCHHHHHHHHHHHHHHHcCCCceEE--E--ec-----CCCCHHHHHHHHHHHHHhCCC
Confidence 9999999987543221 12467788888888888876555552 1 11 134789999999999999999
Q ss_pred EEEEcC--CCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 293 EISLGD--TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 293 ~I~L~D--T~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
-|--.- +.|-++|++++.+.+.+....| ++..-=.+ | ...+++-+++||++|=+|..
T Consensus 149 fVKTsTGf~~~gat~~dv~~m~~~vg~~v~-VkaaGGir-t----~~~al~~i~aGa~RiG~S~g 207 (220)
T 1ub3_A 149 FLKTSTGFGPRGASLEDVALLVRVAQGRAQ-VKAAGGIR-D----RETALRMLKAGASRLGTSSG 207 (220)
T ss_dssp EEECCCSSSSCCCCHHHHHHHHHHHTTSSE-EEEESSCC-S----HHHHHHHHHTTCSEEEETTH
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHhhCCCCe-EEEECCCC-C----HHHHHHHHHCCCcccchhHH
Confidence 887542 2366788888887765522222 22221112 2 36777788899999877644
No 47
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.88 E-value=0.047 Score=52.18 Aligned_cols=138 Identities=11% Similarity=0.012 Sum_probs=94.1
Q ss_pred HhHHHHHHcCCCEEEEecCC-chHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH-HHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASA-SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP-SKVAYV 282 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~-S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~-e~l~~~ 282 (359)
..++.+++.|++-|.+.+-. ++ .+..+.++.+.++++.|++.|+.+.+.+- ..+.......++ +.+.+.
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d--------~~~~~~~~~i~~v~~~~~~~G~p~lv~~~-~~g~~v~~~~~~~~~v~~a 182 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSD--------EDAQQRLNMVKEFNELCHSNGLLSIIEPV-VRPPRCGDKFDREQAIIDA 182 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTT--------SCHHHHHHHHHHHHHHHHTTTCEEEEEEE-ECCCSSCSCCCHHHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEcCCC--------ccHHHHHHHHHHHHHHHHHcCCcEEEEEE-CCCCccccCCChhHHHHHH
Confidence 46899999999987754311 11 11357789999999999999998765542 122222223456 889999
Q ss_pred HHHHHHCCcCEEEEcCC-CCCCcHHHHHHHHHHHHHhCCCce-EEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 283 AKELHDMGCFEISLGDT-IGVGTPGTVVPMLEAVMAVVPVEK-LAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 283 a~~l~~~Gad~I~L~DT-~G~~~P~~v~~lv~~l~~~~p~~~-L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
++++.++|+|.|.+.=+ .|...++.+.++++......+ +| +.+=+=.+.-.-+.+.-.|+++|++.|-+
T Consensus 183 a~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~-~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 183 AKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHIN-MPWVILSSGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp HHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCC-SCEEECCTTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCC-CCeEEEecCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 99999999998877553 233478888888887655433 24 33322225555668888999999987643
No 48
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=96.81 E-value=0.16 Score=47.94 Aligned_cols=201 Identities=13% Similarity=0.099 Sum_probs=116.6
Q ss_pred EEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEec-cCCCCCcCC--CCCHHHHHHHhhhcC--CCeEEEE
Q 018252 129 IVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATS-FVSPKWVPQ--LADARDVMEAVRDLE--GARLPVL 200 (359)
Q Consensus 129 I~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~-fvspk~vPq--~~D~~ev~~~l~~~~--~~~l~~l 200 (359)
|+.+|+ =||. ..++.+.-++.++.+.+.|.++|++|. ...|.+-|. -.+.+.+...++.+. ++.++.=
T Consensus 11 ilN~TpDSFsdgg----~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSID 86 (280)
T 1eye_A 11 VLNVTDDSFSDGG----CYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSID 86 (280)
T ss_dssp EEECSCCTTCSSC----CCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEE
T ss_pred EEeCCCCCcCCCc----ccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEe
Confidence 555555 4564 447899999999999999999999996 233332111 122333444444332 6777777
Q ss_pred eCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-----C-
Q 018252 201 TPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-----I- 274 (359)
Q Consensus 201 ~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r-----~- 274 (359)
+.+.+-++.|+++|++.|+=..... . + .++++.++++|..+. +++.-|.|..-. +
T Consensus 87 T~~~~va~aAl~aGa~iINdvsg~~---------~--d------~~m~~~~a~~~~~vV--lmh~~G~p~tm~~~~~~y~ 147 (280)
T 1eye_A 87 TMRADVARAALQNGAQMVNDVSGGR---------A--D------PAMGPLLAEADVPWV--LMHWRAVSADTPHVPVRYG 147 (280)
T ss_dssp CSCHHHHHHHHHTTCCEEEETTTTS---------S--C------TTHHHHHHHHTCCEE--EECCCCSCTTCTTSCCCCS
T ss_pred CCCHHHHHHHHHcCCCEEEECCCCC---------C--C------HHHHHHHHHhCCeEE--EEcCCCCCcchhhcCcchh
Confidence 7788999999999998776422110 0 0 134556677788763 333233332111 1
Q ss_pred C-----HHHHHHHHHHHHHCCcC--EEEEcCCCCCC-cHHHHHHHHHHHHHh-CCCceEEEEeCC---------------
Q 018252 275 P-----PSKVAYVAKELHDMGCF--EISLGDTIGVG-TPGTVVPMLEAVMAV-VPVEKLAVHLHD--------------- 330 (359)
Q Consensus 275 ~-----~e~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P~~v~~lv~~l~~~-~p~~~L~~H~HN--------------- 330 (359)
+ .+++.+.++.+.++|+. .|.|==-+|.. +.++-.++++.+.+- -++.|+-+=.-|
T Consensus 148 dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfi~~~~~~~~g~~ 227 (280)
T 1eye_A 148 NVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGVM 227 (280)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHTCCSSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHHHHhhcCCCCEEEEecchHHHHhhhccccCCC
Confidence 1 66788888899999987 55543333433 345555666655542 133444332211
Q ss_pred -----CCCcHHHHHHHHHHcCCCEEec
Q 018252 331 -----TYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 331 -----d~GLAlANalaAv~AGa~~ID~ 352 (359)
..+..+|-+..|++.|+++|.+
T Consensus 228 ~~~~~R~~~t~a~~~~a~~~Ga~Ivrv 254 (280)
T 1eye_A 228 RPTDGRDTATAVISALAALHGAWGVRV 254 (280)
T ss_dssp CCGGGGHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCcccchHHHHHHHHHHHHcCCCEEEe
Confidence 1223466777889999998865
No 49
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=96.78 E-value=0.01 Score=54.51 Aligned_cols=165 Identities=15% Similarity=0.118 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHhCCCCEEEE----eccCCCCCcCCCCCHHHHHHHhhhc--CCCeEEE--EeCCh-HhHHHHHHcCCCE
Q 018252 147 TGVKVELIRRLVSSGLPVVEA----TSFVSPKWVPQLADARDVMEAVRDL--EGARLPV--LTPNL-KGFEAAIAAGAKE 217 (359)
Q Consensus 147 ~~~k~~ia~~L~~aGv~~IEv----G~fvspk~vPq~~D~~ev~~~l~~~--~~~~l~~--l~~n~-~gie~a~~aGv~~ 217 (359)
...-.+-++.|.++|.+.+.+ |.|+ |.++--.++.+.+++. ++..+-+ ++-+. +-++.+.++|++.
T Consensus 16 ~~~l~~~i~~l~~~g~d~~h~DVmDg~Fv-----pn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~ 90 (228)
T 3ovp_A 16 LANLGAECLRMLDSGADYLHLDVMDGHFV-----PNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQ 90 (228)
T ss_dssp GGGHHHHHHHHHHTTCSCEEEEEEBSSSS-----SCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSE
T ss_pred chhHHHHHHHHHHcCCCEEEEEecCCCcC-----cccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCE
Confidence 334456677888999996655 5665 3343334456666654 5554433 33344 5688999999999
Q ss_pred EEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE-
Q 018252 218 VAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL- 296 (359)
Q Consensus 218 V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L- 296 (359)
|.+..-+.+ .+.+.++.+|++|+++...+. | .++.+.+.++. + .+|.|.+
T Consensus 91 itvH~Ea~~----------------~~~~~i~~i~~~G~k~gval~-----p---~t~~e~l~~~l----~-~~D~Vl~m 141 (228)
T 3ovp_A 91 YTFHLEATE----------------NPGALIKDIRENGMKVGLAIK-----P---GTSVEYLAPWA----N-QIDMALVM 141 (228)
T ss_dssp EEEEGGGCS----------------CHHHHHHHHHHTTCEEEEEEC-----T---TSCGGGTGGGG----G-GCSEEEEE
T ss_pred EEEccCCch----------------hHHHHHHHHHHcCCCEEEEEc-----C---CCCHHHHHHHh----c-cCCeEEEe
Confidence 998643211 134667788899998755443 2 23433333332 2 3676543
Q ss_pred ---cCCCCCC-cHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEE
Q 018252 297 ---GDTIGVG-TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 297 ---~DT~G~~-~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~I 350 (359)
+-..|.. .|.. .+.++.+++..++.+|.+ |-|....|+-.++++||+.+
T Consensus 142 sv~pGf~Gq~f~~~~-l~ki~~lr~~~~~~~I~V----dGGI~~~t~~~~~~aGAd~~ 194 (228)
T 3ovp_A 142 TVEPGFGGQKFMEDM-MPKVHWLRTQFPSLDIEV----DGGVGPDTVHKCAEAGANMI 194 (228)
T ss_dssp SSCTTTCSCCCCGGG-HHHHHHHHHHCTTCEEEE----ESSCSTTTHHHHHHHTCCEE
T ss_pred eecCCCCCcccCHHH-HHHHHHHHHhcCCCCEEE----eCCcCHHHHHHHHHcCCCEE
Confidence 2222322 2444 455777888777667776 45666789999999999986
No 50
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=96.78 E-value=0.049 Score=51.27 Aligned_cols=196 Identities=10% Similarity=0.044 Sum_probs=115.4
Q ss_pred EEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhh---hcCCCeEEEEeCCh
Q 018252 128 KIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR---DLEGARLPVLTPNL 204 (359)
Q Consensus 128 ~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~---~~~~~~l~~l~~n~ 204 (359)
.|+++| .|-++-.+...+.+.-++.++.+.+.|.+.|++|.-.+.. .+.+.+...++ +..++.++.=+.+.
T Consensus 15 EilN~T-pdsf~dg~~~~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~-----eE~~rv~~vi~~l~~~~~~pisIDT~~~ 88 (271)
T 2yci_X 15 ERINGM-FKDIREAILNKDPRPIQEWARRQAEKGAHYLDVNTGPTAD-----DPVRVMEWLVKTIQEVVDLPCCLDSTNP 88 (271)
T ss_dssp EEEETT-SHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECCSCSS-----CHHHHHHHHHHHHHHHCCCCEEEECSCH
T ss_pred EecCCC-hhhHHHhhhhCCHHHHHHHHHHHHHCCCCEEEEcCCcCch-----hHHHHHHHHHHHHHHhCCCeEEEeCCCH
Confidence 367788 4433333333566889999999999999999999754321 23444444444 33467777777788
Q ss_pred HhHHHHHHc--CCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCC----HHH
Q 018252 205 KGFEAAIAA--GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP----PSK 278 (359)
Q Consensus 205 ~gie~a~~a--Gv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~----~e~ 278 (359)
+-++.|+++ |.+.|+=.... . +++.+++..++++|..+. ++ .+. +.+.+.+ .++
T Consensus 89 ~v~~aal~a~~Ga~iINdvs~~------------~----d~~~~~~~~~a~~~~~vv--~m-~~d-~~G~p~t~~~~~~~ 148 (271)
T 2yci_X 89 DAIEAGLKVHRGHAMINSTSAD------------Q----WKMDIFFPMAKKYEAAII--GL-TMN-EKGVPKDANDRSQL 148 (271)
T ss_dssp HHHHHHHHHCCSCCEEEEECSC------------H----HHHHHHHHHHHHHTCEEE--EE-SCB-TTBCCCSHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEECCCC------------c----cccHHHHHHHHHcCCCEE--EE-ecC-CCCCCCCHHHHHHH
Confidence 889999999 98887632110 0 234456667778888652 22 221 1122345 456
Q ss_pred HHHHHHHHHHCCcC--EEEEcCCCCC--CcHHHHHHHHHHHHH---hC-CCceEEEEeCC-CCCcH------HHHHHHHH
Q 018252 279 VAYVAKELHDMGCF--EISLGDTIGV--GTPGTVVPMLEAVMA---VV-PVEKLAVHLHD-TYGQS------LPNILISL 343 (359)
Q Consensus 279 l~~~a~~l~~~Gad--~I~L~DT~G~--~~P~~v~~lv~~l~~---~~-p~~~L~~H~HN-d~GLA------lANalaAv 343 (359)
+.+..+.+.++|+. .|.|==.+|. -+.++-.++++.++. .. |+.++-+=.+| .+|+. -+-+..|+
T Consensus 149 l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~~~p~~p~l~G~Snksfg~~~r~~l~~t~~~~a~ 228 (271)
T 2yci_X 149 AMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPAPRTVLGLSNVSQKCPDRPLINRTYLVMAM 228 (271)
T ss_dssp HHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHHHHHTTSSSSCCEEEEEGGGGGTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHHHHHHHhCCCCCCEEEeeCccccCCchHHHHHHHHHHHHH
Confidence 66677778889986 3665434443 134555566665553 34 55666554443 33432 22334556
Q ss_pred HcCCCE
Q 018252 344 QVSPMH 349 (359)
Q Consensus 344 ~AGa~~ 349 (359)
.+|++.
T Consensus 229 ~~g~~~ 234 (271)
T 2yci_X 229 TAGLDA 234 (271)
T ss_dssp HHTCCE
T ss_pred HHhCCc
Confidence 666653
No 51
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.76 E-value=0.06 Score=50.48 Aligned_cols=182 Identities=13% Similarity=0.121 Sum_probs=116.0
Q ss_pred CCCHHHHHHHHHHHHhC--CCCEEEEeccCCCCCcCCCCCHHHHHHHhhh-cC-CCeEEEEe--C----Ch----HhHHH
Q 018252 144 TVPTGVKVELIRRLVSS--GLPVVEATSFVSPKWVPQLADARDVMEAVRD-LE-GARLPVLT--P----NL----KGFEA 209 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~a--Gv~~IEvG~fvspk~vPq~~D~~ev~~~l~~-~~-~~~l~~l~--~----n~----~gie~ 209 (359)
..+.++..++.+...+. |+..|- ++|.++| ...+.++. .. ++++.+.+ | +. ..++.
T Consensus 24 ~~t~~~i~~lc~eA~~~~~~~~aVc----V~p~~v~------~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~ 93 (260)
T 1p1x_A 24 DDTDEKVIALCHQAKTPVGNTAAIC----IYPRFIP------IARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRA 93 (260)
T ss_dssp TCCHHHHHHHHHHTEETTEECSEEE----CCGGGHH------HHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCCceEEE----ECHHHHH------HHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHH
Confidence 45788888888887777 777774 3443332 33444542 23 67787666 3 11 36788
Q ss_pred HHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHC
Q 018252 210 AIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDM 289 (359)
Q Consensus 210 a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~ 289 (359)
|++.|+++|.+.+...... ....+...+.+..+.+.+.+.|..+.+-|.+.+ ..+++.+...++.+.++
T Consensus 94 Av~~GAdEIDmVinig~l~-----~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~------L~d~e~i~~a~~ia~ea 162 (260)
T 1p1x_A 94 AIAYGADEVDVVFPYRALM-----AGNEQVGFDLVKACKEACAAANVLLKVIIETGE------LKDEALIRKASEISIKA 162 (260)
T ss_dssp HHHHTCSEEEEECCHHHHH-----TTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHH------HCSHHHHHHHHHHHHHT
T ss_pred HHHcCCCEEEEeccHHhhh-----CCCHHHHHHHHHHHHHHhcccCCeEEEEEeccc------CCcHHHHHHHHHHHHHh
Confidence 9999999999988654321 123467788899999988877776554443221 35666688999999999
Q ss_pred CcCEEEEcCC--CCCCcHHHHHHHHHHHHHhC-CCceEEEEeCCCCCcHHHHHHHHHHcCCC
Q 018252 290 GCFEISLGDT--IGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILISLQVSPM 348 (359)
Q Consensus 290 Gad~I~L~DT--~G~~~P~~v~~lv~~l~~~~-p~~~L~~H~HNd~GLAlANalaAv~AGa~ 348 (359)
|+|-|--.-- .|-++|+++.-+.+.+++.. + .++++..-=-.-. ...+++-+++|++
T Consensus 163 GADfVKTSTGf~~~gAt~e~v~lm~~~I~~~~~g-~~v~VKaaGGIrt-~~~al~~i~aga~ 222 (260)
T 1p1x_A 163 GADFIKTSTGKVAVNATPESARIMMEVIRDMGVE-KTVGFKPAGGVRT-AEDAQKYLAIADE 222 (260)
T ss_dssp TCSEEECCCSCSSCCCCHHHHHHHHHHHHHHTCT-TTCEEECBSSCCS-HHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhcCC-CCceEEEeCCCCC-HHHHHHHHHhhhh
Confidence 9998875422 25569999988887777543 2 1344433221111 4556666666544
No 52
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=96.76 E-value=0.0093 Score=54.58 Aligned_cols=171 Identities=17% Similarity=0.161 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEE--EEeCCh-HhHHHHHHcCCCEEEEecC
Q 018252 147 TGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLP--VLTPNL-KGFEAAIAAGAKEVAIFAS 223 (359)
Q Consensus 147 ~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~--~l~~n~-~gie~a~~aGv~~V~i~~s 223 (359)
...-.+.++.+.+.|++.|+++.-.. .++|.+....++.+.+++..+..+- .++-|. +-++.+.++|++.|.+..-
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi~DG-~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e 94 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDVMDG-RFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVE 94 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBS-SSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECS
T ss_pred HhHHHHHHHHHHHcCCCEEEEEEEec-CCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECcc
Confidence 34556678889999999999976211 2334444434566777765554443 344343 5689999999999988654
Q ss_pred --CchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCC--
Q 018252 224 --ASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT-- 299 (359)
Q Consensus 224 --~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT-- 299 (359)
..+ ...+.++.++++|+++...+. | .++.+.+ +.+.+ ++|-|.+.=.
T Consensus 95 ~~~~~----------------~~~~~~~~i~~~g~~~gv~~~-----p---~t~~e~~----~~~~~-~~D~v~~msv~p 145 (230)
T 1tqj_A 95 HNASP----------------HLHRTLCQIRELGKKAGAVLN-----P---STPLDFL----EYVLP-VCDLILIMSVNP 145 (230)
T ss_dssp TTTCT----------------THHHHHHHHHHTTCEEEEEEC-----T---TCCGGGG----TTTGG-GCSEEEEESSCC
T ss_pred cccch----------------hHHHHHHHHHHcCCcEEEEEe-----C---CCcHHHH----HHHHh-cCCEEEEEEecc
Confidence 322 123567778889998754332 1 1222222 22222 6786643322
Q ss_pred --CCCCcHHHHHHHHHHHHHhCC----CceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 300 --IGVGTPGTVVPMLEAVMAVVP----VEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 300 --~G~~~P~~v~~lv~~l~~~~p----~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
.|...+....+.++.+++..+ +.+|.+ +-|....|+-...++||+.+=
T Consensus 146 g~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v----~GGI~~~~~~~~~~aGad~vv 199 (230)
T 1tqj_A 146 GFGGQSFIPEVLPKIRALRQMCDERGLDPWIEV----DGGLKPNNTWQVLEAGANAIV 199 (230)
T ss_dssp ----CCCCGGGHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTTHHHHHHTCCEEE
T ss_pred ccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 232234455666666776552 467776 678777888899999999863
No 53
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=96.73 E-value=0.17 Score=48.71 Aligned_cols=203 Identities=9% Similarity=0.073 Sum_probs=117.6
Q ss_pred cEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcC---CCCCHHH---HHHHhh---hcCCCe
Q 018252 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSF-VSPKWVP---QLADARD---VMEAVR---DLEGAR 196 (359)
Q Consensus 127 V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~f-vspk~vP---q~~D~~e---v~~~l~---~~~~~~ 196 (359)
+=|+.+|+.-=.. ...+.+..++.++.+.+.|.++|+||.- ..|...+ .....+| +...++ +..++.
T Consensus 31 MGIlNvTpDSFsd---~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vp 107 (314)
T 3tr9_A 31 MGIINVSPNSFYH---PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQL 107 (314)
T ss_dssp EEEEECSTTCSBC---BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSE
T ss_pred EEEEeCCCCchhh---ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCe
Confidence 3466666543333 4568999999999999999999999962 3443210 0111233 223332 234666
Q ss_pred EEEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCC-
Q 018252 197 LPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP- 275 (359)
Q Consensus 197 l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~- 275 (359)
++.=+.+.+-++.|+++|++.|+=.-.. .. .++++.++++|..+. ++..-|.|..-...
T Consensus 108 ISIDT~~~~Va~aAl~aGa~iINDVsg~-----------~~-------~~m~~v~a~~g~~vV--lMh~~G~P~tmq~~~ 167 (314)
T 3tr9_A 108 ISVDTSRPRVMREAVNTGADMINDQRAL-----------QL-------DDALTTVSALKTPVC--LMHFPSETRKPGSTT 167 (314)
T ss_dssp EEEECSCHHHHHHHHHHTCCEEEETTTT-----------CS-------TTHHHHHHHHTCCEE--EECCCCTTCCTTSSC
T ss_pred EEEeCCCHHHHHHHHHcCCCEEEECCCC-----------Cc-------hHHHHHHHHhCCeEE--EECCCCCCccccccc
Confidence 6666677788999999998876642211 10 134455667787763 34333333211111
Q ss_pred --------HHHHHHHHHHHHHCCcC--EEEEcCCCC---C-CcHHHHHHHHHHHHHh-CCCceEEE--------------
Q 018252 276 --------PSKVAYVAKELHDMGCF--EISLGDTIG---V-GTPGTVVPMLEAVMAV-VPVEKLAV-------------- 326 (359)
Q Consensus 276 --------~e~l~~~a~~l~~~Gad--~I~L~DT~G---~-~~P~~v~~lv~~l~~~-~p~~~L~~-------------- 326 (359)
.+++.+.++.+.++|++ .|.|==-+| . -++++-.++++.+..- ..+.|+-+
T Consensus 168 ~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~PvL~G~SRKsfig~~~~~ 247 (314)
T 3tr9_A 168 HFYFLQSVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGWSRKSMIGDVLNQ 247 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCBEECCTTCHHHHHHHTC
T ss_pred ccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHHHHHhcCCCCEEEEechhhhhhhhcCC
Confidence 35677778888899986 455422345 2 2456666666665441 11223222
Q ss_pred EeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 327 HLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 327 H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
-..+..+-.+|-+..|++.||++|-+
T Consensus 248 ~~~~R~~~t~a~~~~a~~~Ga~IvRv 273 (314)
T 3tr9_A 248 PPENRLFGSIAADVLAVYHGASIIRT 273 (314)
T ss_dssp CGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ChHHhHHHHHHHHHHHHHcCCcEEEe
Confidence 12234445566678889999998754
No 54
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.72 E-value=0.025 Score=51.00 Aligned_cols=154 Identities=22% Similarity=0.208 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe-CChHhHHHHHHcCCCEEEEecCCc
Q 018252 147 TGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-PNLKGFEAAIAAGAKEVAIFASAS 225 (359)
Q Consensus 147 ~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~-~n~~gie~a~~aGv~~V~i~~s~S 225 (359)
.++-+++++.|.+.|++.||++.- . .+..+.++.+++ ++..+-+=+ -+...++.|+++|++-++..- .
T Consensus 24 ~~~~~~~~~~l~~gGv~~iel~~k-~-------~~~~~~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~--~ 92 (207)
T 2yw3_A 24 GEDLLGLARVLEEEGVGALEITLR-T-------EKGLEALKALRK-SGLLLGAGTVRSPKEAEAALEAGAAFLVSPG--L 92 (207)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEECS-S-------THHHHHHHHHTT-SSCEEEEESCCSHHHHHHHHHHTCSEEEESS--C
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCC-C-------hHHHHHHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC--C
Confidence 345678999999999999999962 1 133455666666 654443222 245789999999999886431 1
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcH
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTP 305 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P 305 (359)
+ .++++.++.+|+.+.. | -.+++++ ..+.++|+|.|.+ +. ..+
T Consensus 93 d------------------~~v~~~~~~~g~~~i~------G-----~~t~~e~----~~A~~~Gad~v~~---fp-a~~ 135 (207)
T 2yw3_A 93 L------------------EEVAALAQARGVPYLP------G-----VLTPTEV----ERALALGLSALKF---FP-AEP 135 (207)
T ss_dssp C------------------HHHHHHHHHHTCCEEE------E-----ECSHHHH----HHHHHTTCCEEEE---TT-TTT
T ss_pred C------------------HHHHHHHHHhCCCEEe------c-----CCCHHHH----HHHHHCCCCEEEE---ec-Ccc
Confidence 1 1556777788887532 2 1355553 3455689999988 21 111
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 306 GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 306 ~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
..=.++++.+++.+|++++-.= =|....|+-.-+++|++.|=+
T Consensus 136 ~gG~~~lk~l~~~~~~ipvvai----GGI~~~n~~~~l~aGa~~vav 178 (207)
T 2yw3_A 136 FQGVRVLRAYAEVFPEVRFLPT----GGIKEEHLPHYAALPNLLAVG 178 (207)
T ss_dssp TTHHHHHHHHHHHCTTCEEEEB----SSCCGGGHHHHHTCSSBSCEE
T ss_pred ccCHHHHHHHHhhCCCCcEEEe----CCCCHHHHHHHHhCCCcEEEE
Confidence 1012567888888877676543 355567899999999886543
No 55
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=96.71 E-value=0.047 Score=50.64 Aligned_cols=191 Identities=15% Similarity=0.117 Sum_probs=123.6
Q ss_pred EEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe--C--C-
Q 018252 129 IVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT--P--N- 203 (359)
Q Consensus 129 I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~--~--n- 203 (359)
.+|-|+= +...+.++..++.+...+.|+..|-+- |.++| ...+.++ ..++++.+.+ | +
T Consensus 30 ~IDhTlL------~p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~------~a~~~L~-~s~v~v~tVigFP~G~~ 92 (239)
T 3ngj_A 30 YIDHTLL------KADATEEQIRKLCSEAAEYKFASVCVN----PTWVP------LCAELLK-GTGVKVCTVIGFPLGAT 92 (239)
T ss_dssp TEEEEEC------CTTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHH------HHHHHHT-TSSCEEEEEESTTTCCS
T ss_pred hcCcccC------CCCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHH------HHHHHhC-CCCCeEEEEeccCCCCC
Confidence 4666662 235788889999999999999888663 33332 2233332 3456776655 3 1
Q ss_pred --h---HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH
Q 018252 204 --L---KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 278 (359)
Q Consensus 204 --~---~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~ 278 (359)
. ..++.|++.|+++|.+.+...... ....+..++.+..+.+.+.. ..+.+-| +- +..+.+.
T Consensus 93 ~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk-----~g~~~~v~~eI~~v~~a~~~--~~lKVIl--Et-----~~Lt~ee 158 (239)
T 3ngj_A 93 PSEVKAYETKVAVEQGAEEVDMVINIGMVK-----AKKYDDVEKDVKAVVDASGK--ALTKVII--EC-----CYLTNEE 158 (239)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHHTT--SEEEEEC--CG-----GGSCHHH
T ss_pred chHHHHHHHHHHHHcCCCEEEEEeehHHhc-----cccHHHHHHHHHHHHHHhcC--CceEEEE--ec-----CCCCHHH
Confidence 1 367789999999999988754322 23466788888888888864 3332222 22 1357889
Q ss_pred HHHHHHHHHHCCcCEEEEcCC--CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceeee
Q 018252 279 VAYVAKELHDMGCFEISLGDT--IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFTF 356 (359)
Q Consensus 279 l~~~a~~l~~~Gad~I~L~DT--~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~~ 356 (359)
+...++.+.++|+|-|--.-- .|-+++++++-+-+.+...+ ++-.-=--- ....+++-+++||++|=+|-..
T Consensus 159 i~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~~v-----~VKasGGIr-t~~da~~~i~aGA~riGtS~~~ 232 (239)
T 3ngj_A 159 KVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGDKA-----LVKAAGGIR-TFDDAMKMINNGASRIGASAGI 232 (239)
T ss_dssp HHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGGGS-----EEEEESSCC-SHHHHHHHHHTTEEEEEESCHH
T ss_pred HHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCCCc-----eEEEeCCCC-CHHHHHHHHHhcccceecccHH
Confidence 999999999999998875532 45678888777666553332 222211111 2378889999999999776543
No 56
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.70 E-value=0.064 Score=52.40 Aligned_cols=181 Identities=14% Similarity=0.103 Sum_probs=120.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEecc-----CCCCC--c-C-----CC--------CCHHHHHHHhh---hcCCCeEEE
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSF-----VSPKW--V-P-----QL--------ADARDVMEAVR---DLEGARLPV 199 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~f-----vspk~--v-P-----q~--------~D~~ev~~~l~---~~~~~~l~~ 199 (359)
.=+.+.-+++++...++|.+.|=.+.| ++|.. + + +. -..++ +..+. +-.+..+..
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~-~~~L~~~~~~~Gi~~~s 109 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEED-EIKLKEYVESKGMIFIS 109 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHH-HHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHH-HHHHHHHHHHhCCeEEE
Confidence 448899999999999999999999854 23422 1 0 00 01222 23232 235666554
Q ss_pred EeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHH
Q 018252 200 LTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKV 279 (359)
Q Consensus 200 l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l 279 (359)
=.-+..+++...+.|++.+.|-.. ...| + ++++++.+.|.+|. |+ .|..+.+++
T Consensus 110 t~~d~~svd~l~~~~v~~~KI~S~-----~~~n--------~----~LL~~va~~gkPvi--Ls-------tGmat~~Ei 163 (349)
T 2wqp_A 110 TLFSRAAALRLQRMDIPAYKIGSG-----ECNN--------Y----PLIKLVASFGKPII--LS-------TGMNSIESI 163 (349)
T ss_dssp EECSHHHHHHHHHHTCSCEEECGG-----GTTC--------H----HHHHHHHTTCSCEE--EE-------CTTCCHHHH
T ss_pred eeCCHHHHHHHHhcCCCEEEECcc-----cccC--------H----HHHHHHHhcCCeEE--EE-------CCCCCHHHH
Confidence 444778888888888988888422 1122 1 45566666788873 22 235699999
Q ss_pred HHHHHHHHHCCcCEEEEc-CCCCCCcHHHHHHH--HHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 280 AYVAKELHDMGCFEISLG-DTIGVGTPGTVVPM--LEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 280 ~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~l--v~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
...++.+.+.|. .|.|+ =+.++=+|....+| +..+++.+|++++++=-|- .| .+-++||+.+||++|+.=++
T Consensus 164 ~~Ave~i~~~G~-~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt-~G--~~~~~AAvAlGA~iIEkH~t 238 (349)
T 2wqp_A 164 KKSVEIIREAGV-PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHT-LD--NYACLGAVALGGSILERHFT 238 (349)
T ss_dssp HHHHHHHHHHTC-CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCS-SS--SHHHHHHHHHTCCEEEEEBC
T ss_pred HHHHHHHHHcCC-CEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCC-Cc--HHHHHHHHHhCCCEEEeCCC
Confidence 999999999998 45553 24444445555544 7888999977899986554 34 78889999999999986443
No 57
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=96.60 E-value=0.049 Score=52.28 Aligned_cols=199 Identities=12% Similarity=-0.013 Sum_probs=131.8
Q ss_pred cccCCCCC--CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC---ChHhHHH
Q 018252 135 RDGLQNEK--NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP---NLKGFEA 209 (359)
Q Consensus 135 RDG~Q~~~--~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~---n~~gie~ 209 (359)
+.+.+..+ +....+....++++-.+++-+.|=-.+...-++.+. .-...+...+ +..++.+..... +.+.+.+
T Consensus 23 ~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~-~~~~~~~~~A-~~~~VPVaLHlDHg~~~e~i~~ 100 (306)
T 3pm6_A 23 RTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADS-LLVRTAASAC-RAASVPITLHLDHAQDPEIIKR 100 (306)
T ss_dssp HHTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTT-HHHHHHHHHH-HHCSSCEEEEEEEECCHHHHHH
T ss_pred HHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccH-HHHHHHHHHH-HHCCCCEEEEcCCCCCHHHHHH
Confidence 44555553 456789999999999999999874333111011110 0011122222 234565655553 5678999
Q ss_pred HHHc--------CCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC---------C
Q 018252 210 AIAA--------GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE---------G 272 (359)
Q Consensus 210 a~~a--------Gv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~---------~ 272 (359)
|+++ |...|.+=.|. .+.+|+++..++++++|+..|+.|.+.|-..=|.+|. -
T Consensus 101 ai~~~~~~~~~~GFtSVMiDgS~----------~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~ 170 (306)
T 3pm6_A 101 AADLSRSETHEPGFDSIMVDMSH----------FSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGV 170 (306)
T ss_dssp HHHTC------CCCSEEEECCTT----------SCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCB
T ss_pred HHHhhhhccCCCCCCEEEEeCCC----------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccc
Confidence 9999 99888874331 3468899999999999999999998877654344332 2
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCC----c---HHHHHHHHHHHHHhC-CCceEEEEeCCCCCcHHHHHHHHHH
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLGDTIGVG----T---PGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILISLQ 344 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~----~---P~~v~~lv~~l~~~~-p~~~L~~H~HNd~GLAlANalaAv~ 344 (359)
.++|++..+++ +.|+| .|+=++|.. . |.-=.++++.+++.+ ++++|.+|+= -|..-.....|++
T Consensus 171 yT~Peea~~Fv----~TgvD--~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGg--SG~p~e~i~~ai~ 242 (306)
T 3pm6_A 171 LTTPEESEEFV----ATGIN--WLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGA--DPFTKEIFEKCIE 242 (306)
T ss_dssp CCCHHHHHHHH----TTTCS--EECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSC--TTCCHHHHHHHHH
T ss_pred CCCHHHHHHHH----HcCCC--EEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCC--CCCCHHHHHHHHH
Confidence 47999988877 37999 455555533 2 322346677778777 3678888765 5778889999999
Q ss_pred cCCCEEece
Q 018252 345 VSPMHAKPC 353 (359)
Q Consensus 345 AGa~~ID~t 353 (359)
.|+.-|+..
T Consensus 243 ~GV~KiNi~ 251 (306)
T 3pm6_A 243 RGVAKVNVN 251 (306)
T ss_dssp TTEEEEEES
T ss_pred cCCeEEEeC
Confidence 999888753
No 58
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=96.57 E-value=0.071 Score=49.23 Aligned_cols=173 Identities=14% Similarity=0.108 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh-c-CCCeEEEEeC----------C---hHhHHHHH
Q 018252 147 TGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-L-EGARLPVLTP----------N---LKGFEAAI 211 (359)
Q Consensus 147 ~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~-~-~~~~l~~l~~----------n---~~gie~a~ 211 (359)
.++-.++++.+.+.|++.|.+.. . +.+.+.+ . ....+..-.+ . ...++.++
T Consensus 44 ~~~~~~~~~~~~~~g~~~i~~~~----~----------~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~ 109 (273)
T 2qjg_A 44 LIDIRKTVNDVAEGGANAVLLHK----G----------IVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAI 109 (273)
T ss_dssp SSSHHHHHHHHHHHTCSEEEECH----H----------HHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEECSCHHHHH
T ss_pred hhhHHHHHHHHHhcCCCEEEeCH----H----------HHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHHHHHHHHH
Confidence 34556889999999999998632 0 0111111 1 1122211111 1 36789999
Q ss_pred HcCCCEE--EEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHC
Q 018252 212 AAGAKEV--AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDM 289 (359)
Q Consensus 212 ~aGv~~V--~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~ 289 (359)
++|++.| .+..... +.++.++.++++++.+++.|+++.+.+. ..|.......+++.+.++++.+.++
T Consensus 110 ~~Ga~~v~~~l~~~~~----------~~~~~~~~~~~v~~~~~~~g~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~~~ 178 (273)
T 2qjg_A 110 RMGADAVSIHVNVGSD----------EDWEAYRDLGMIAETCEYWGMPLIAMMY-PRGKHIQNERDPELVAHAARLGAEL 178 (273)
T ss_dssp HTTCSEEEEEEEETST----------THHHHHHHHHHHHHHHHHHTCCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHHHT
T ss_pred HcCCCEEEEEEecCCC----------CHHHHHHHHHHHHHHHHHcCCCEEEEeC-CCCcccCCCCCHhHHHHHHHHHHHc
Confidence 9999999 4443321 3456778889999999999998765432 1221111124677777888999999
Q ss_pred CcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCC---CcHHHHHHHHHHcCCCEEec
Q 018252 290 GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY---GQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 290 Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~---GLAlANalaAv~AGa~~ID~ 352 (359)
|+|.|.+.-+ ..+ ++++.+++..+ +++-.|+=-+. -.++.....++++||+.|-+
T Consensus 179 Gad~i~~~~~---~~~----~~l~~i~~~~~-ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 179 GADIVKTSYT---GDI----DSFRDVVKGCP-APVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp TCSEEEECCC---SSH----HHHHHHHHHCS-SCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCCEEEECCC---CCH----HHHHHHHHhCC-CCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 9998888742 223 34555555554 57777763332 12233366777899987754
No 59
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.55 E-value=0.23 Score=45.56 Aligned_cols=185 Identities=14% Similarity=0.047 Sum_probs=117.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe--C----Ch----HhHHHHHH
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT--P----NL----KGFEAAIA 212 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~--~----n~----~gie~a~~ 212 (359)
...+.++..++.+...+.|+..|-+- |.++| ...+. +.++++.+.+ | +. ..++. ++
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~------~a~~~---l~gv~v~tvigFP~G~~~~~~k~~E~~~-i~ 77 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAP------VVRPL---LRKVKLCVVADFPFGALPTASRIALVSR-LA 77 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHH------HHGGG---CSSSEEEEEESTTTCCSCHHHHHHHHHH-HT
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHH------HHHHH---hCCCeEEEEeCCCCCCCchHHHHHHHHH-HH
Confidence 34688999999999999999888654 32221 11112 2236776665 3 11 35778 99
Q ss_pred cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 213 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
.|+++|.+.+...... ....+...+.+..+.+.+++.+++|. | +.+ ..+++.+...++.+.++|+|
T Consensus 78 ~GAdEID~Vinig~~~-----~g~~~~v~~ei~~v~~a~~~~~lKvI--l--Et~-----~Lt~eei~~a~~ia~eaGAD 143 (226)
T 1vcv_A 78 EVADEIDVVAPIGLVK-----SRRWAEVRRDLISVVGAAGGRVVKVI--T--EEP-----YLRDEERYTLYDIIAEAGAH 143 (226)
T ss_dssp TTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHTTTSEEEEE--C--CGG-----GCCHHHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEecchhhhc-----CCCHHHHHHHHHHHHHHHcCCCceEE--E--ecc-----CCCHHHHHHHHHHHHHcCCC
Confidence 9999999988654321 22457778888888888866555552 2 222 23578899999999999999
Q ss_pred EEEEc--CC----------CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHc---CCC----EEece
Q 018252 293 EISLG--DT----------IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQV---SPM----HAKPC 353 (359)
Q Consensus 293 ~I~L~--DT----------~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~A---Ga~----~ID~t 353 (359)
-|--. =+ .|-++|+++.-+-+.+++. +. .+++..-=-.-. ...+++-+++ |++ +|=+|
T Consensus 144 fVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~-g~-~v~vKaaGGirt-~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 144 FIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEK-GY-RLGVKMAGGIRT-REQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp EEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHH-TC-CCEEEEESSCCS-HHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred EEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHh-CC-CceEEEeCCCCC-HHHHHHHHHHHHCCCCcCCceEecC
Confidence 88754 22 3678888887665554443 31 233322111111 4455555556 999 99887
Q ss_pred eeecc
Q 018252 354 FTFAY 358 (359)
Q Consensus 354 l~~~~ 358 (359)
-+.+.
T Consensus 221 ~~~~i 225 (226)
T 1vcv_A 221 TPEAL 225 (226)
T ss_dssp CGGGG
T ss_pred chhhh
Confidence 65543
No 60
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.52 E-value=0.075 Score=46.82 Aligned_cols=165 Identities=18% Similarity=0.133 Sum_probs=96.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc-CCCeEEE--EeCC-hH-hHHHHHHcCCCEEE
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPV--LTPN-LK-GFEAAIAAGAKEVA 219 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~-~~~~l~~--l~~n-~~-gie~a~~aGv~~V~ 219 (359)
.+.++-+++++.+.+ |++.||+|.... .++..++.+.+++. ++..+.+ .+-+ .. -++.+.++|++-|.
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~~------~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~ 82 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPLI------KAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVT 82 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHHH------HHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHHH------HhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEE
Confidence 568899999999999 999999997311 01112344555543 4555543 2335 33 47889999999988
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc--
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG-- 297 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~-- 297 (359)
+.....+ + .+.++++.++++|+.+. ++ . .+..+|+. .++.+.+.|+|.|.+-
T Consensus 83 vh~~~~~------------~---~~~~~~~~~~~~g~~~g--v~--~----~s~~~p~~---~~~~~~~~g~d~v~~~~~ 136 (207)
T 3ajx_A 83 VLGSADD------------S---TIAGAVKAAQAHNKGVV--VD--L----IGIEDKAT---RAQEVRALGAKFVEMHAG 136 (207)
T ss_dssp EETTSCH------------H---HHHHHHHHHHHHTCEEE--EE--C----TTCSSHHH---HHHHHHHTTCSEEEEECC
T ss_pred EeccCCh------------H---HHHHHHHHHHHcCCceE--EE--E----ecCCChHH---HHHHHHHhCCCEEEEEec
Confidence 7543321 1 23356667777788752 22 1 12335555 2344456689987332
Q ss_pred CC---CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 298 DT---IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 298 DT---~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
-+ .|. .|.. +.++.++.. +.++.+= -|-...|+-.++++||+.|=
T Consensus 137 ~~~~~~g~-~~~~--~~i~~~~~~--~~pi~v~----GGI~~~~~~~~~~aGad~vv 184 (207)
T 3ajx_A 137 LDEQAKPG-FDLN--GLLAAGEKA--RVPFSVA----GGVKVATIPAVQKAGAEVAV 184 (207)
T ss_dssp HHHHTSTT-CCTH--HHHHHHHHH--TSCEEEE----SSCCGGGHHHHHHTTCSEEE
T ss_pred ccccccCC-CchH--HHHHHhhCC--CCCEEEE----CCcCHHHHHHHHHcCCCEEE
Confidence 11 232 3444 555555542 2334432 24444588899999999874
No 61
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=96.49 E-value=0.12 Score=48.97 Aligned_cols=205 Identities=15% Similarity=0.118 Sum_probs=118.7
Q ss_pred cEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEec-cCCCCCcCCCC--CHHHHHHHhhhc---CCCeEEEE
Q 018252 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATS-FVSPKWVPQLA--DARDVMEAVRDL---EGARLPVL 200 (359)
Q Consensus 127 V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~-fvspk~vPq~~--D~~ev~~~l~~~---~~~~l~~l 200 (359)
+=|+.+|+. -++--+...+.+.-++.++.+.+.|.++|++|. ...|.+.|... +.+.+...++.+ .++.++.=
T Consensus 18 mGilN~Tpd-SFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSID 96 (282)
T 1aj0_A 18 MGILNVTPD-SFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVD 96 (282)
T ss_dssp EEEEECCTT-TSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred EEEEeCCCC-ccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEe
Confidence 345666652 122223446789999999999999999999997 44454333221 122233333332 36777777
Q ss_pred eCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC--C--CC-
Q 018252 201 TPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG--A--IP- 275 (359)
Q Consensus 201 ~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~--r--~~- 275 (359)
+.+.+-++.|+++|++.|+=... .. ..++++.++++|..+. +++.-|.|..- + ++
T Consensus 97 T~~~~va~aAl~aGa~iINdvsg---~~---------------d~~~~~~~a~~~~~vV--lmh~~G~p~tm~~~~~y~d 156 (282)
T 1aj0_A 97 TSKPEVIRESAKVGAHIINDIRS---LS---------------EPGALEAAAETGLPVC--LMHMQGNPKTMQEAPKYDD 156 (282)
T ss_dssp CCCHHHHHHHHHTTCCEEEETTT---TC---------------STTHHHHHHHHTCCEE--EECCSSCTTCCSCCCCCSC
T ss_pred CCCHHHHHHHHHcCCCEEEECCC---CC---------------CHHHHHHHHHhCCeEE--EEccCCCCccccccCccch
Confidence 77889999999999988764221 10 1134556677788763 23322333210 1 11
Q ss_pred -----HHHHHHHHHHHHHCCcC--EEEEcCCCCCC-cHHHHHHHHHHHHHhC-CCceEEE-E-------------eCCCC
Q 018252 276 -----PSKVAYVAKELHDMGCF--EISLGDTIGVG-TPGTVVPMLEAVMAVV-PVEKLAV-H-------------LHDTY 332 (359)
Q Consensus 276 -----~e~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P~~v~~lv~~l~~~~-p~~~L~~-H-------------~HNd~ 332 (359)
.+++.+.++.+.++|+. .|.|==-+|.+ ++++-.++++.+.+-- ++.|+-+ . ..+-+
T Consensus 157 ~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf~k~~~~n~~ll~~l~~~~~~g~P~l~G~Srksfig~~~g~~~~~rl 236 (282)
T 1aj0_A 157 VFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERL 236 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEECCTTCHHHHHHHTCCGGGCH
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCcccCHHHHHHHHHHHHHHhcCCCCEEEEECccHhHHhhcCCCHHHHH
Confidence 67788888899999987 56543222332 3445555665554311 2223222 1 12222
Q ss_pred CcHHHHHHHHHHcCCCEEec
Q 018252 333 GQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 333 GLAlANalaAv~AGa~~ID~ 352 (359)
+-.++-+..|+..|+++|.+
T Consensus 237 ~~t~a~~~~a~~~ga~Ivrv 256 (282)
T 1aj0_A 237 SGSLACAVIAAMQGAHIIRV 256 (282)
T ss_dssp HHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEe
Confidence 33346777788999999875
No 62
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=96.45 E-value=0.14 Score=47.18 Aligned_cols=194 Identities=18% Similarity=0.131 Sum_probs=122.7
Q ss_pred EEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe--C---C
Q 018252 129 IVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT--P---N 203 (359)
Q Consensus 129 I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~--~---n 203 (359)
.+|-|+ .+...+.++..++.+...+.|+..|-+ +|.++| ... .+ ...++.+...+ | +
T Consensus 16 ~IDhTl------L~p~~t~~~i~~lc~eA~~~~~~aVcV----~p~~v~------~a~-~l-~~~~v~v~tVigFP~G~~ 77 (231)
T 3ndo_A 16 LVDHTL------LKPEATPSDVTALVDEAADLGVFAVCV----SPPLVS------VAA-GV-APSGLAIAAVAGFPSGKH 77 (231)
T ss_dssp TEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEE----CGGGHH------HHH-HH-CCTTCEEEEEESTTTCCS
T ss_pred hcCccc------CCCCCCHHHHHHHHHHHHHhCCcEEEE----CHHHHH------HHH-Hh-cCCCCeEEEEecCCCCCC
Confidence 456665 123577888889999999999988866 343332 122 22 22456666655 3 1
Q ss_pred --h---HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH
Q 018252 204 --L---KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 278 (359)
Q Consensus 204 --~---~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~ 278 (359)
. ..++.|++.|+++|.+.+...... ....+...+.+..+.+.+. |..+..-|. -+. .....+++.
T Consensus 78 ~~~~K~~E~~~Ai~~GAdEIDmVinig~lk-----~g~~~~v~~ei~~v~~a~~--~~~lKvIiE--t~~-L~~~~t~ee 147 (231)
T 3ndo_A 78 VPGIKATEAELAVAAGATEIDMVIDVGAAL-----AGDLDAVSADITAVRKAVR--AATLKVIVE--SAA-LLEFSGEPL 147 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHTT--TSEEEEECC--HHH-HHHHTCHHH
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEeehHhhh-----cccHHHHHHHHHHHHHHcc--CCceEEEEE--Ccc-cCCCCCHHH
Confidence 1 357789999999999987643321 2346777888888888875 444432222 110 001128899
Q ss_pred HHHHHHHHHHCCcCEEEEcC--C-CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 279 VAYVAKELHDMGCFEISLGD--T-IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 279 l~~~a~~l~~~Gad~I~L~D--T-~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
+...++.+.++|+|-|--.- + .|.+++++++-+-+.+...++ ++..-=.+ | ...+++-+++||++|=+|..
T Consensus 148 i~~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~~v~~~v~-VKaaGGIr-t----~~~a~~~i~aGa~RiGtS~g 221 (231)
T 3ndo_A 148 LADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVGERLG-VKASGGIR-T----AEQAAAMLDAGATRLGLSGS 221 (231)
T ss_dssp HHHHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHHHHHHTTTSE-EEEESSCC-S----HHHHHHHHHTTCSEEEESSH
T ss_pred HHHHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHHHhCCCce-EEEeCCCC-C----HHHHHHHHHhcchhcccchH
Confidence 99999999999999887553 2 466788888776665543222 12211112 2 37788889999999987754
Q ss_pred e
Q 018252 356 F 356 (359)
Q Consensus 356 ~ 356 (359)
.
T Consensus 222 ~ 222 (231)
T 3ndo_A 222 R 222 (231)
T ss_dssp H
T ss_pred H
Confidence 3
No 63
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=96.35 E-value=0.041 Score=49.62 Aligned_cols=171 Identities=13% Similarity=0.142 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeE--EEEeCCh-HhHHHHHHcCCCEEEEecC-
Q 018252 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARL--PVLTPNL-KGFEAAIAAGAKEVAIFAS- 223 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l--~~l~~n~-~gie~a~~aGv~~V~i~~s- 223 (359)
+...+.++.+.+.|++.||++.-..+ .+|.+....++.+.+++..+..+ -.++-+. +.++.+.++|++.|++...
T Consensus 23 ~~~~~~i~~~~~~G~d~i~l~~~dg~-f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~ 101 (230)
T 1rpx_A 23 SKLGEQVKAIEQAGCDWIHVDVMDGR-FVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQ 101 (230)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSS-SSSCBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECST
T ss_pred HHHHHHHHHHHHCCCCEEEEeeccCC-cccccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecC
Confidence 36677888999999999999841000 11222222344455554433332 2233333 5789999999999987654
Q ss_pred -CchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCC-
Q 018252 224 -ASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIG- 301 (359)
Q Consensus 224 -~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G- 301 (359)
.++. ..++++.++++|+.+...+. | .++.+.+.++ ..++|.| +.++++
T Consensus 102 ~~~~~----------------~~~~~~~~~~~g~~ig~~~~-----p---~t~~e~~~~~-----~~~~d~v-l~~~~~p 151 (230)
T 1rpx_A 102 SSTIH----------------LHRTINQIKSLGAKAGVVLN-----P---GTPLTAIEYV-----LDAVDLV-LIMSVNP 151 (230)
T ss_dssp TTCSC----------------HHHHHHHHHHTTSEEEEEEC-----T---TCCGGGGTTT-----TTTCSEE-EEESSCT
T ss_pred ccchh----------------HHHHHHHHHHcCCcEEEEeC-----C---CCCHHHHHHH-----HhhCCEE-EEEEEcC
Confidence 2221 22456666778887643332 1 1232222221 2478855 355553
Q ss_pred -C---CcHHHHHHHHHHHHHhCC----CceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 302 -V---GTPGTVVPMLEAVMAVVP----VEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 302 -~---~~P~~v~~lv~~l~~~~p----~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
. ..+....+.++.+++..+ +.++.+ +-|....|+-.++++||+.|.+.
T Consensus 152 g~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v----~GGI~~~n~~~~~~aGad~vvvg 207 (230)
T 1rpx_A 152 GFGGQSFIESQVKKISDLRKICAERGLNPWIEV----DGGVGPKNAYKVIEAGANALVAG 207 (230)
T ss_dssp TCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred CCCCccccHHHHHHHHHHHHHHHhcCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEC
Confidence 2 123344455666666542 455554 44555578888899999998864
No 64
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=96.32 E-value=0.13 Score=46.89 Aligned_cols=160 Identities=19% Similarity=0.166 Sum_probs=103.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHH-HhhhcCCCeEEEEeC-ChHhHHHHHHcCCCEEEEec
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVME-AVRDLEGARLPVLTP-NLKGFEAAIAAGAKEVAIFA 222 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~-~l~~~~~~~l~~l~~-n~~gie~a~~aGv~~V~i~~ 222 (359)
.+.++-+++++.|.+.|++.||++.- . .+..+.++ ..++.++..+-+=+. ...+++.|+++|++-|+..
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k-~-------~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p- 96 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFR-S-------EAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTP- 96 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT-S-------TTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECS-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc-C-------chHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEEC-
Confidence 45667889999999999999999962 1 13344445 444556654433222 4588999999999988542
Q ss_pred CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC
Q 018252 223 SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGV 302 (359)
Q Consensus 223 s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~ 302 (359)
..+ .++++.++++|..+.. | -.+++++ ..+.++|+|.|.+ +-
T Consensus 97 -~~d------------------~~v~~~ar~~g~~~i~------G-----v~t~~e~----~~A~~~Gad~vk~---Fp- 138 (224)
T 1vhc_A 97 -GLN------------------PKIVKLCQDLNFPITP------G-----VNNPMAI----EIALEMGISAVKF---FP- 138 (224)
T ss_dssp -SCC------------------HHHHHHHHHTTCCEEC------E-----ECSHHHH----HHHHHTTCCEEEE---TT-
T ss_pred -CCC------------------HHHHHHHHHhCCCEEe------c-----cCCHHHH----HHHHHCCCCEEEE---ee-
Confidence 111 2567788889987632 2 2355553 4466899999888 11
Q ss_pred CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHc-CCCEEeceee
Q 018252 303 GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQV-SPMHAKPCFT 355 (359)
Q Consensus 303 ~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~A-Ga~~ID~tl~ 355 (359)
..+..=.++++.+++.+|.+++.. .=|....|+-.-+++ |+..|=+|.+
T Consensus 139 a~~~gG~~~lk~l~~~~~~ipvva----iGGI~~~N~~~~l~agga~~v~gS~i 188 (224)
T 1vhc_A 139 AEASGGVKMIKALLGPYAQLQIMP----TGGIGLHNIRDYLAIPNIVACGGSWF 188 (224)
T ss_dssp TTTTTHHHHHHHHHTTTTTCEEEE----BSSCCTTTHHHHHTSTTBCCEEECGG
T ss_pred CccccCHHHHHHHHhhCCCCeEEE----ECCcCHHHHHHHHhcCCCEEEEEchh
Confidence 011101467788888887767644 235556688888888 8777655543
No 65
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.20 E-value=0.14 Score=46.80 Aligned_cols=156 Identities=18% Similarity=0.124 Sum_probs=103.6
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHH-HhhhcCCCeEEEEeC-ChHhHHHHHHcCCCEEEEecC
Q 018252 146 PTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVME-AVRDLEGARLPVLTP-NLKGFEAAIAAGAKEVAIFAS 223 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~-~l~~~~~~~l~~l~~-n~~gie~a~~aGv~~V~i~~s 223 (359)
+.++-+++++.|.+.|++.||++.- .+ +..+.++ ..++.++..+-+=+. +...++.|+++|.+-|+..
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k-~~-------~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p-- 105 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLR-SQ-------HGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTP-- 105 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESS-ST-------HHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECS--
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecC-Cc-------cHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeC--
Confidence 5567789999999999999999952 11 2334444 334556655533232 5588999999999988742
Q ss_pred CchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCC
Q 018252 224 ASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVG 303 (359)
Q Consensus 224 ~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~ 303 (359)
-.+ .++++.++.+|..... | -.+++++ ..+.++|+|.|.+
T Consensus 106 ~~d------------------~~v~~~~~~~g~~~i~------G-----~~t~~e~----~~A~~~Gad~vk~------- 145 (225)
T 1mxs_A 106 GIT------------------EDILEAGVDSEIPLLP------G-----ISTPSEI----MMGYALGYRRFKL------- 145 (225)
T ss_dssp SCC------------------HHHHHHHHHCSSCEEC------E-----ECSHHHH----HHHHTTTCCEEEE-------
T ss_pred CCC------------------HHHHHHHHHhCCCEEE------e-----eCCHHHH----HHHHHCCCCEEEE-------
Confidence 111 2667788889987531 2 2355543 4466899999988
Q ss_pred cHHH-H--HHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHH-cCCCEEeceee
Q 018252 304 TPGT-V--VPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ-VSPMHAKPCFT 355 (359)
Q Consensus 304 ~P~~-v--~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~-AGa~~ID~tl~ 355 (359)
-|.. + .++++.++..+|++++-.= =|....|+-.-++ +|++.|=+|-+
T Consensus 146 FPa~~~~G~~~lk~i~~~~~~ipvvai----GGI~~~N~~~~l~~~Ga~~v~gSai 197 (225)
T 1mxs_A 146 FPAEISGGVAAIKAFGGPFGDIRFCPT----GGVNPANVRNYMALPNVMCVGTTWM 197 (225)
T ss_dssp TTHHHHTHHHHHHHHHTTTTTCEEEEB----SSCCTTTHHHHHHSTTBCCEEECTT
T ss_pred ccCccccCHHHHHHHHhhCCCCeEEEE----CCCCHHHHHHHHhccCCEEEEEchh
Confidence 3332 3 4778888888877776543 3555568888888 68887755443
No 66
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.14 E-value=0.32 Score=44.40 Aligned_cols=170 Identities=15% Similarity=0.077 Sum_probs=104.7
Q ss_pred EEEeCCCcccCCCCC--CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEE------
Q 018252 128 KIVEVGPRDGLQNEK--NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPV------ 199 (359)
Q Consensus 128 ~I~D~TLRDG~Q~~~--~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~------ 199 (359)
.|+-| |... .--++....++++...+.|..-|+++++ ++ ++.+++..+..+.+
T Consensus 20 livsc------q~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~~------------~~-i~~ir~~v~~Pvig~~k~~~ 80 (229)
T 3q58_A 20 LIVSC------QPVPGSPMDKPEIVAAMAQAAASAGAVAVRIEGI------------EN-LRTVRPHLSVPIIGIIKRDL 80 (229)
T ss_dssp EEEEC------CCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEESH------------HH-HHHHGGGCCSCEEEECBCCC
T ss_pred EEEEE------eCCCCCCCCCcchHHHHHHHHHHCCCcEEEECCH------------HH-HHHHHHhcCCCEEEEEeecC
Confidence 56666 4442 2345789999999999999999999751 22 34455433433332
Q ss_pred ------EeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC
Q 018252 200 ------LTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 273 (359)
Q Consensus 200 ------l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r 273 (359)
+.|..++++.++++|++.|.+-...-. +. +.+.+++++++++|+.+.+.+
T Consensus 81 ~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~---------~p----~~l~~~i~~~~~~g~~v~~~v----------- 136 (229)
T 3q58_A 81 TGSPVRITPYLQDVDALAQAGADIIAFDASFRS---------RP----VDIDSLLTRIRLHGLLAMADC----------- 136 (229)
T ss_dssp SSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC---------CS----SCHHHHHHHHHHTTCEEEEEC-----------
T ss_pred CCCceEeCccHHHHHHHHHcCCCEEEECccccC---------Ch----HHHHHHHHHHHHCCCEEEEec-----------
Confidence 224557889999999998876443200 00 124567788888898874322
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEE--cC-CCC--CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCC
Q 018252 274 IPPSKVAYVAKELHDMGCFEISL--GD-TIG--VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSP 347 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L--~D-T~G--~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa 347 (359)
++. +.++++.++|+|.|.. -+ |.+ ...| . .++++.+++. ++++-.=+ |.. ..++..++++||
T Consensus 137 ~t~----eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~-~-~~li~~l~~~--~ipvIA~G----GI~t~~d~~~~~~~Ga 204 (229)
T 3q58_A 137 STV----NEGISCHQKGIEFIGTTLSGYTGPITPVEP-D-LAMVTQLSHA--GCRVIAEG----RYNTPALAANAIEHGA 204 (229)
T ss_dssp SSH----HHHHHHHHTTCSEEECTTTTSSSSCCCSSC-C-HHHHHHHHTT--TCCEEEES----SCCSHHHHHHHHHTTC
T ss_pred CCH----HHHHHHHhCCCCEEEecCccCCCCCcCCCC-C-HHHHHHHHHc--CCCEEEEC----CCCCHHHHHHHHHcCC
Confidence 344 3456778899999953 11 111 1122 2 2566666664 34444332 443 578888999999
Q ss_pred CEEec
Q 018252 348 MHAKP 352 (359)
Q Consensus 348 ~~ID~ 352 (359)
+.|=+
T Consensus 205 dgV~V 209 (229)
T 3q58_A 205 WAVTV 209 (229)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 97743
No 67
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.14 E-value=0.04 Score=50.63 Aligned_cols=166 Identities=13% Similarity=0.070 Sum_probs=99.0
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEE--EEeCCh-HhHHHHHHcCCCEEEEecCC-ch
Q 018252 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLP--VLTPNL-KGFEAAIAAGAKEVAIFASA-SE 226 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~--~l~~n~-~gie~a~~aGv~~V~i~~s~-S~ 226 (359)
.+-++.+ +.|.+.+++..-. -.+||.+.--..+.+.+++..+..+- .++-+. +-++.+.++|++.|.+..-+ ++
T Consensus 16 ~~~i~~~-~~gad~lHvDvmD-G~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~~~ 93 (231)
T 3ctl_A 16 KEQIEFI-DSHADYFHIDIMD-GHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETING 93 (231)
T ss_dssp HHHHHHH-HTTCSCEEEEEEC-SSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGCTT
T ss_pred HHHHHHH-HcCCCEEEEEEEe-CccCccchhcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccCCc
Confidence 3445666 8999987664311 11234444334566777765444343 334454 45889999999998886432 21
Q ss_pred HHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc----CCCCC
Q 018252 227 AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG----DTIGV 302 (359)
Q Consensus 227 ~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~----DT~G~ 302 (359)
.+.++++.+|++|+++...+. | .++.+.+.++. + ++|.|.+. -..|-
T Consensus 94 ----------------~~~~~i~~i~~~G~k~gv~ln-----p---~tp~~~~~~~l----~-~~D~VlvmsV~pGfggQ 144 (231)
T 3ctl_A 94 ----------------QAFRLIDEIRRHDMKVGLILN-----P---ETPVEAMKYYI----H-KADKITVMTVDPGFAGQ 144 (231)
T ss_dssp ----------------THHHHHHHHHHTTCEEEEEEC-----T---TCCGGGGTTTG----G-GCSEEEEESSCTTCSSC
T ss_pred ----------------cHHHHHHHHHHcCCeEEEEEE-----C---CCcHHHHHHHH----h-cCCEEEEeeeccCcCCc
Confidence 133677888999998755442 2 13333333332 2 68877542 12232
Q ss_pred CcHHHHHHHHHHHHHhCC----CceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 303 GTPGTVVPMLEAVMAVVP----VEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 303 ~~P~~v~~lv~~l~~~~p----~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
.-.....+.++.+++..+ +.+|++ |-|....|+-.++++||+.+=
T Consensus 145 ~f~~~~l~kI~~lr~~~~~~~~~~~I~V----dGGI~~~~~~~~~~aGAd~~V 193 (231)
T 3ctl_A 145 PFIPEMLDKLAELKAWREREGLEYEIEV----DGSCNQATYEKLMAAGADVFI 193 (231)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCCEEEE----ESCCSTTTHHHHHHHTCCEEE
T ss_pred cccHHHHHHHHHHHHHHhccCCCceEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 334445555666665442 356776 778888899999999999864
No 68
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.12 E-value=0.36 Score=44.09 Aligned_cols=170 Identities=14% Similarity=0.075 Sum_probs=104.2
Q ss_pred EEEeCCCcccCCCCC--CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEE------
Q 018252 128 KIVEVGPRDGLQNEK--NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPV------ 199 (359)
Q Consensus 128 ~I~D~TLRDG~Q~~~--~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~------ 199 (359)
.|+-| |... .--++....++++...+.|..-|+++++ + .++.+++..+..+.+
T Consensus 20 livsc------q~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~~------------~-~i~~ir~~v~~Pvig~~k~d~ 80 (232)
T 3igs_A 20 LIVSC------QPVPGSPLDKPEIVAAMALAAEQAGAVAVRIEGI------------D-NLRMTRSLVSVPIIGIIKRDL 80 (232)
T ss_dssp EEEEC------CCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEESH------------H-HHHHHHTTCCSCEEEECBCCC
T ss_pred EEEEE------eCCCCCCCCCcchHHHHHHHHHHCCCeEEEECCH------------H-HHHHHHHhcCCCEEEEEeecC
Confidence 56667 4431 2345789999999999999999999751 2 244555443444332
Q ss_pred ------EeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC
Q 018252 200 ------LTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 273 (359)
Q Consensus 200 ------l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r 273 (359)
+.|..++++.++++|++.|.+-...-. +. +.+.++++.++++|+.+.+.+
T Consensus 81 ~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~---------~p----~~l~~~i~~~~~~g~~v~~~v----------- 136 (232)
T 3igs_A 81 DESPVRITPFLDDVDALAQAGAAIIAVDGTARQ---------RP----VAVEALLARIHHHHLLTMADC----------- 136 (232)
T ss_dssp SSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC---------CS----SCHHHHHHHHHHTTCEEEEEC-----------
T ss_pred CCcceEeCccHHHHHHHHHcCCCEEEECccccC---------CH----HHHHHHHHHHHHCCCEEEEeC-----------
Confidence 224556889999999998876543200 00 124567788888898774322
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEE--cC--CCC-CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCC
Q 018252 274 IPPSKVAYVAKELHDMGCFEISL--GD--TIG-VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSP 347 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L--~D--T~G-~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa 347 (359)
++. +.++++.++|+|.|.. -. +.+ ...| -.++++.+++. ++++-.= -|.. ..++..++++||
T Consensus 137 ~t~----eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~--~~~~i~~l~~~--~ipvIA~----GGI~t~~d~~~~~~~Ga 204 (232)
T 3igs_A 137 SSV----DDGLACQRLGADIIGTTMSGYTTPDTPEEP--DLPLVKALHDA--GCRVIAE----GRYNSPALAAEAIRYGA 204 (232)
T ss_dssp CSH----HHHHHHHHTTCSEEECTTTTSSSSSCCSSC--CHHHHHHHHHT--TCCEEEE----SCCCSHHHHHHHHHTTC
T ss_pred CCH----HHHHHHHhCCCCEEEEcCccCCCCCCCCCC--CHHHHHHHHhc--CCcEEEE----CCCCCHHHHHHHHHcCC
Confidence 344 3456788899999853 11 111 1112 12556666654 3444432 3553 678888999999
Q ss_pred CEEec
Q 018252 348 MHAKP 352 (359)
Q Consensus 348 ~~ID~ 352 (359)
+.|=+
T Consensus 205 dgV~V 209 (232)
T 3igs_A 205 WAVTV 209 (232)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 97743
No 69
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=96.09 E-value=0.18 Score=47.93 Aligned_cols=135 Identities=15% Similarity=0.143 Sum_probs=87.2
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCC-CCHHHHHHHhhhcCCCeEEEEeCC---h-HhHHHHHHcCCCE
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQL-ADARDVMEAVRDLEGARLPVLTPN---L-KGFEAAIAAGAKE 217 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~-~D~~ev~~~l~~~~~~~l~~l~~n---~-~gie~a~~aGv~~ 217 (359)
..++.++..++++.+.+.|++.|-++. ..| -+ .|..++++.+++..+..-..++.| . +-++...++|++.
T Consensus 48 ~~ls~e~i~~~i~~~~~~g~~~i~~tG-GEP----ll~~~l~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~~g~~~ 122 (340)
T 1tv8_A 48 ELLTFDEMARIAKVYAELGVKKIRITG-GEP----LMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRR 122 (340)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEES-SCG----GGSTTHHHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEeC-CCc----cchhhHHHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHHCCCCE
Confidence 458999999999999999999988764 222 21 255666666665544323334433 2 3456667789999
Q ss_pred EEEecCCc--hHHHHhhhcC-CHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 218 VAIFASAS--EAFSKSNINC-SIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 218 V~i~~s~S--~~~~~~n~~~-t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
|.+.+... +.|...+-+. + ++.+.+.++.+++.|+.+.+++. +. + ..+.+++.++++.+.+.|++
T Consensus 123 v~iSld~~~~~~~~~i~~~~~~----~~~v~~~i~~l~~~g~~v~i~~v--v~-~---g~n~~ei~~~~~~~~~~g~~ 190 (340)
T 1tv8_A 123 INVSLDAIDDTLFQSINNRNIK----ATTILEQIDYATSIGLNVKVNVV--IQ-K---GINDDQIIPMLEYFKDKHIE 190 (340)
T ss_dssp EEEECCCSSHHHHHHHHSSCCC----HHHHHHHHHHHHHTTCEEEEEEE--EC-T---TTTGGGHHHHHHHHHHTTCC
T ss_pred EEEecCCCCHHHHHHhhCCCCC----HHHHHHHHHHHHHCCCCEEEEEE--Ee-C---CCCHHHHHHHHHHHHhcCCe
Confidence 99987542 3444322112 3 44556677778889997655443 32 1 12456788889989999987
No 70
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=96.09 E-value=0.48 Score=45.05 Aligned_cols=200 Identities=17% Similarity=0.180 Sum_probs=114.1
Q ss_pred EEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEec-cCCCCCcCCCCCHHHH---HHHhhhcC--CCeEE
Q 018252 128 KIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATS-FVSPKWVPQLADARDV---MEAVRDLE--GARLP 198 (359)
Q Consensus 128 ~I~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~-fvspk~vPq~~D~~ev---~~~l~~~~--~~~l~ 198 (359)
=|+.+|+ =||.+ .++.+.-++.++.+.+.|.++|+||. ...|.+-| ....+|+ ...++.+. ++.++
T Consensus 27 gilNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~-v~~~eE~~Rv~pvi~~l~~~~vpiS 101 (294)
T 2y5s_A 27 GILNATPDSFSDGGR----FLARDDALRRAERMIAEGADLLDIGGESTRPGAPP-VPLDEELARVIPLVEALRPLNVPLS 101 (294)
T ss_dssp EEEECCC--------------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCC-CCHHHHHHHHHHHHHHHGGGCSCEE
T ss_pred EEEeCCCCCCCCCCC----cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCC-CCHHHHHHHHHHHHHHHhhCCCeEE
Confidence 4566665 56644 46778899999999999999999997 33443222 2223333 33333332 66666
Q ss_pred EEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC-----C
Q 018252 199 VLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG-----A 273 (359)
Q Consensus 199 ~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~-----r 273 (359)
.=+.+.+-++.|+++|++.|+=.-.. . + .++++.++++|..+. +++.-|.|..- .
T Consensus 102 IDT~~~~Va~aAl~aGa~iINdVsg~-----------~-d------~~m~~~~a~~~~~vV--lmh~~G~p~tm~~~~~~ 161 (294)
T 2y5s_A 102 IDTYKPAVMRAALAAGADLINDIWGF-----------R-Q------PGAIDAVRDGNSGLC--AMHMLGEPQTMQVGEPD 161 (294)
T ss_dssp EECCCHHHHHHHHHHTCSEEEETTTT-----------C-S------TTHHHHHSSSSCEEE--EECCCEETTTTEECCCC
T ss_pred EECCCHHHHHHHHHcCCCEEEECCCC-----------C-c------hHHHHHHHHhCCCEE--EECCCCCCccccccCCc
Confidence 66677788999999999877642211 0 0 144566778888663 33322222210 1
Q ss_pred C-C-----HHHHHHHHHHHHHCCcC--EEEEcCCCCCC-cH-HHHHHHHHHHHHh------CCCceEEEEeCC-------
Q 018252 274 I-P-----PSKVAYVAKELHDMGCF--EISLGDTIGVG-TP-GTVVPMLEAVMAV------VPVEKLAVHLHD------- 330 (359)
Q Consensus 274 ~-~-----~e~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P-~~v~~lv~~l~~~------~p~~~L~~H~HN------- 330 (359)
+ + .+++.+.++.+.++|+. .|.|==-+|.+ ++ ++-.++++.+.+- .++.|+-+=.-|
T Consensus 162 y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~~~n~~ll~~l~~l~~~~~~~~g~Pvl~G~Srksfig~l 241 (294)
T 2y5s_A 162 YGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAV 241 (294)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTTHHHHHHHHTGGGGSCBCTTSSBCCBEEECTTCHHHHTT
T ss_pred cccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCcccccchHHHHHHHHHHHHHHhccccCCCCCEEEEecccHHhhhh
Confidence 1 1 55777788888899987 55543222222 24 5555666665542 234444432222
Q ss_pred ---C-----CCcHHHHHHHHHHcCCCEEec
Q 018252 331 ---T-----YGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 331 ---d-----~GLAlANalaAv~AGa~~ID~ 352 (359)
+ .+.-.|-+..|++.|+++|.+
T Consensus 242 ~g~~~~~~R~~~t~a~~~~a~~~Ga~Ivrv 271 (294)
T 2y5s_A 242 IGGKPPLERVAASVAAALCAVERGAAIVRV 271 (294)
T ss_dssp TTSCCGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCchhhhhHHHHHHHHHHHHcCCcEEEc
Confidence 1 123466777889999999865
No 71
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=95.97 E-value=0.01 Score=55.35 Aligned_cols=166 Identities=17% Similarity=0.131 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHhCCCCEEEE----eccCCCCCcCCCCCHHHHHHHhhhc-CCCeEEE-E-eCCh-HhHHHHHHcCCCEEE
Q 018252 148 GVKVELIRRLVSSGLPVVEA----TSFVSPKWVPQLADARDVMEAVRDL-EGARLPV-L-TPNL-KGFEAAIAAGAKEVA 219 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEv----G~fvspk~vPq~~D~~ev~~~l~~~-~~~~l~~-l-~~n~-~gie~a~~aGv~~V~ 219 (359)
..-.+-++.|.++|.+.+.+ |.|+ |.++--..+.+.+++. ++..+-+ + +-+. +-++.+.++|++.|.
T Consensus 40 ~~L~~~i~~l~~~G~d~lHvDVmDg~FV-----pnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~it 114 (246)
T 3inp_A 40 ARLGDDVKAVLAAGADNIHFDVMDNHYV-----PNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIV 114 (246)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSSSS-----SCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEE
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCCCcC-----cchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEE
Confidence 34456677888899996655 5665 3444434566777754 3555544 2 2333 568889999999999
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE---
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL--- 296 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L--- 296 (359)
+..-+.+ .+.+.++.+|++|+++...+. | .++.+.+.++.. ++|.|.+
T Consensus 115 vH~Ea~~----------------~~~~~i~~ir~~G~k~Gvaln-----p---~Tp~e~l~~~l~-----~vD~VlvMsV 165 (246)
T 3inp_A 115 FHPEASE----------------HIDRSLQLIKSFGIQAGLALN-----P---ATGIDCLKYVES-----NIDRVLIMSV 165 (246)
T ss_dssp ECGGGCS----------------CHHHHHHHHHTTTSEEEEEEC-----T---TCCSGGGTTTGG-----GCSEEEEECS
T ss_pred Eccccch----------------hHHHHHHHHHHcCCeEEEEec-----C---CCCHHHHHHHHh-----cCCEEEEeee
Confidence 8643221 234677788999998865443 2 233333333332 4776654
Q ss_pred -cCCCCCCcHHHHHHHHHHHHHhC----CCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 297 -GDTIGVGTPGTVVPMLEAVMAVV----PVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 297 -~DT~G~~~P~~v~~lv~~l~~~~----p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
+...|..--....+-++.+++.. .+.+|++ |-|....|+-.++++||+.+=
T Consensus 166 ~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~V----DGGI~~~ti~~~~~aGAD~~V 221 (246)
T 3inp_A 166 NPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEI----DGGVNPYNIAEIAVCGVNAFV 221 (246)
T ss_dssp CTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEE----ESSCCTTTHHHHHTTTCCEEE
T ss_pred cCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 23333222222333344555432 3356666 567777889999999999863
No 72
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=95.93 E-value=0.29 Score=44.25 Aligned_cols=160 Identities=19% Similarity=0.150 Sum_probs=102.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHh-hhcCCCeEEE-EeCChHhHHHHHHcCCCEEEEec
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAV-RDLEGARLPV-LTPNLKGFEAAIAAGAKEVAIFA 222 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l-~~~~~~~l~~-l~~n~~gie~a~~aGv~~V~i~~ 222 (359)
.+.++-+++++.|.+.|++.||++.- . .+..+.++.+ ++.++..+-+ .+-+..+++.|+++|.+-|+..
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k-~-------~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p- 95 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLR-T-------ECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISP- 95 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESC-S-------TTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEES-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC-C-------hhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcC-
Confidence 45567789999999999999999962 1 1334445534 4556544322 2234578999999999988742
Q ss_pred CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC
Q 018252 223 SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGV 302 (359)
Q Consensus 223 s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~ 302 (359)
-.+ .++++.++.+|..... | -.+++++ ..+.++|+|.|.+ +-
T Consensus 96 -~~d------------------~~v~~~~~~~g~~~i~------G-----~~t~~e~----~~A~~~Gad~v~~---Fp- 137 (214)
T 1wbh_A 96 -GLT------------------EPLLKAATEGTIPLIP------G-----ISTVSEL----MLGMDYGLKEFKF---FP- 137 (214)
T ss_dssp -SCC------------------HHHHHHHHHSSSCEEE------E-----ESSHHHH----HHHHHTTCCEEEE---TT-
T ss_pred -CCC------------------HHHHHHHHHhCCCEEE------e-----cCCHHHH----HHHHHCCCCEEEE---ec-
Confidence 111 2667888889987632 2 1355553 4456799999888 11
Q ss_pred CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHc-CCCEEeceee
Q 018252 303 GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQV-SPMHAKPCFT 355 (359)
Q Consensus 303 ~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~A-Ga~~ID~tl~ 355 (359)
..+..=.++++.+++.+|++++-.= =|....|+-.-+++ |+..|-+|-+
T Consensus 138 a~~~gG~~~lk~i~~~~~~ipvvai----GGI~~~n~~~~l~agg~~~v~gS~i 187 (214)
T 1wbh_A 138 AEANGGVKALQAIAGPFSQVRFCPT----GGISPANYRDYLALKSVLCIGGSWL 187 (214)
T ss_dssp TTTTTHHHHHHHHHTTCTTCEEEEB----SSCCTTTHHHHHTSTTBSCEEEGGG
T ss_pred CccccCHHHHHHHhhhCCCCeEEEE----CCCCHHHHHHHHhcCCCeEEEeccc
Confidence 0111014677888888877776442 24555688888888 7776655443
No 73
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=95.82 E-value=0.33 Score=45.70 Aligned_cols=142 Identities=13% Similarity=0.128 Sum_probs=91.1
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEecc--CC-CCCcCCCCCHHHHHHHhhhcCCCe-EEEEe--C---ChHhHHHHHHcC
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSF--VS-PKWVPQLADARDVMEAVRDLEGAR-LPVLT--P---NLKGFEAAIAAG 214 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~f--vs-pk~vPq~~D~~ev~~~l~~~~~~~-l~~l~--~---n~~gie~a~~aG 214 (359)
..+.++.++-++.|.+.|++.|-+... .. ..-.|...+..++++.+++.++.. +.... | +.+-++...++|
T Consensus 32 ~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g 111 (304)
T 2qgq_A 32 SRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELD 111 (304)
T ss_dssp BCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGGGCCHHHHHHHHHCT
T ss_pred eeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecccCCHHHHHHHHhCC
Confidence 468899999999999999998866421 10 000011246677888887766653 32222 2 234577777888
Q ss_pred --CCEEEEec-CCchHHHHhhhcC--CHHHHHHHHHHHHHHHHh--CCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHH
Q 018252 215 --AKEVAIFA-SASEAFSKSNINC--SIEDSLVRYRAVAHAAKV--LSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELH 287 (359)
Q Consensus 215 --v~~V~i~~-s~S~~~~~~n~~~--t~~e~l~~i~~~i~~Ak~--~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~ 287 (359)
++.+++.+ +.|+-..+ .+|+ +.+ .+.++++.+++ .|+.+..++. +|.|.+ +.+.+.+.++.+.
T Consensus 112 ~~~~~l~i~lqs~s~~vl~-~m~r~~t~e----~~~~~i~~l~~~~~gi~i~~~~I--vG~PgE---t~ed~~~t~~~l~ 181 (304)
T 2qgq_A 112 KVVKYFDVPVQHGSDKILK-LMGRTKSSE----ELKKMLSSIRERFPDAVLRTSII--VGFPGE---TEEDFEELKQFVE 181 (304)
T ss_dssp TBCCEEECCCBCSCHHHHH-HTTCCSCHH----HHHHHHHHHHHHCTTCEEEEEEE--ECCTTC---CHHHHHHHHHHHH
T ss_pred CCccEEEEecccCCHHHHH-HhCCCCCHH----HHHHHHHHHHhhCCCCEEEEEEE--EeCCCC---CHHHHHHHHHHHH
Confidence 88998866 44554333 3443 444 45566667777 6888777775 666643 6677888888888
Q ss_pred HCCcCEEE
Q 018252 288 DMGCFEIS 295 (359)
Q Consensus 288 ~~Gad~I~ 295 (359)
+.+++.+.
T Consensus 182 ~l~~~~v~ 189 (304)
T 2qgq_A 182 EIQFDKLG 189 (304)
T ss_dssp HHCCSEEE
T ss_pred HcCCCEEE
Confidence 88887654
No 74
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.77 E-value=0.49 Score=41.74 Aligned_cols=157 Identities=13% Similarity=0.079 Sum_probs=96.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcC-CCeEE-EEeCChHhHHHHHHcCCCEEEEec
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLE-GARLP-VLTPNLKGFEAAIAAGAKEVAIFA 222 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~-~~~l~-~l~~n~~gie~a~~aGv~~V~i~~ 222 (359)
.+.++-.++++.+.+.|++.|++.... + ...+.+.+..+..+ ...+- ..+.+...++.++++|++.|++
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~-~------~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~-- 86 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNS-P------QWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVT-- 86 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTS-T------THHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEEC--
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC-h------hHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEe--
Confidence 467788999999999999999997632 1 11233333333322 22221 1234567899999999998863
Q ss_pred CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC
Q 018252 223 SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGV 302 (359)
Q Consensus 223 s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~ 302 (359)
+..+ .++++.++++|.++. .+ ..+++++ ..+.+.|+|.|.+--|.
T Consensus 87 ~~~~------------------~~~~~~~~~~g~~~~------~g-----~~t~~e~----~~a~~~G~d~v~v~~t~-- 131 (212)
T 2v82_A 87 PNIH------------------SEVIRRAVGYGMTVC------PG-----CATATEA----FTALEAGAQALKIFPSS-- 131 (212)
T ss_dssp SSCC------------------HHHHHHHHHTTCEEE------CE-----ECSHHHH----HHHHHTTCSEEEETTHH--
T ss_pred CCCC------------------HHHHHHHHHcCCCEE------ee-----cCCHHHH----HHHHHCCCCEEEEecCC--
Confidence 2110 134567778898752 22 1355553 44567899998873221
Q ss_pred CcHHHHHHHHHHHHHhCC-CceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 303 GTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 303 ~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
+. -.+.++.+++.++ ++++..=+ |....|+...+++||+.|-+
T Consensus 132 --~~-g~~~~~~l~~~~~~~ipvia~G----GI~~~~i~~~~~~Ga~gv~v 175 (212)
T 2v82_A 132 --AF-GPQYIKALKAVLPSDIAVFAVG----GVTPENLAQWIDAGCAGAGL 175 (212)
T ss_dssp --HH-CHHHHHHHHTTSCTTCEEEEES----SCCTTTHHHHHHHTCSEEEE
T ss_pred --CC-CHHHHHHHHHhccCCCeEEEeC----CCCHHHHHHHHHcCCCEEEE
Confidence 21 2356666776666 45665533 44456888888999998864
No 75
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.77 E-value=0.14 Score=50.50 Aligned_cols=177 Identities=15% Similarity=0.091 Sum_probs=112.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccC---CCCCcCCCCCHHHHHHHhh---hcCCCeEEEEeCChHhHHHHHHcCCCEEE
Q 018252 146 PTGVKVELIRRLVSSGLPVVEATSFV---SPKWVPQLADARDVMEAVR---DLEGARLPVLTPNLKGFEAAIAAGAKEVA 219 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aGv~~IEvG~fv---spk~vPq~~D~~ev~~~l~---~~~~~~l~~l~~n~~gie~a~~aGv~~V~ 219 (359)
+.+.-+++++.+.++|.+.|=.+.|- +|...-.+. .+. ++.+. +-.|+.+..=+-+...++.+.+. ++.+.
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~-~eg-l~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~lk 230 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLG-LEG-LKILKRVSDEYGLGVISEIVTPADIEVALDY-VDVIQ 230 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCT-HHH-HHHHHHHHHHHTCEEEEECCSGGGHHHHTTT-CSEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCC-HHH-HHHHHHHHHHcCCEEEEecCCHHHHHHHHhh-CCEEE
Confidence 78999999999999999999888763 221111121 222 23333 23455554444466788887766 78777
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHHCCcCEEEEcC
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAKELHDMGCFEISLGD 298 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r-~~~e~l~~~a~~l~~~Gad~I~L~D 298 (359)
+-.. ...| .++++++.+.|.+|. |+ . |. .+++++...++.+.+.|...|.|+.
T Consensus 231 Igs~-----~~~n------------~~LL~~~a~~gkPVi--lk----~---G~~~t~~e~~~Ave~i~~~Gn~~i~L~~ 284 (385)
T 3nvt_A 231 IGAR-----NMQN------------FELLKAAGRVDKPIL--LK----R---GLSATIEEFIGAAEYIMSQGNGKIILCE 284 (385)
T ss_dssp ECGG-----GTTC------------HHHHHHHHTSSSCEE--EE----C---CTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred ECcc-----cccC------------HHHHHHHHccCCcEE--Ee----c---CCCCCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 7432 1111 155667778899873 22 1 33 7999999999999999998888887
Q ss_pred CCCCCcH----HHHH-HHHHHHHHhCCCce-EEEEeCC--CCCcHHHHHHHHHHcCCC--EEec
Q 018252 299 TIGVGTP----GTVV-PMLEAVMAVVPVEK-LAVHLHD--TYGQSLPNILISLQVSPM--HAKP 352 (359)
Q Consensus 299 T~G~~~P----~~v~-~lv~~l~~~~p~~~-L~~H~HN--d~GLAlANalaAv~AGa~--~ID~ 352 (359)
--....| ..+. ..+..+++.+. .+ +.=|.|. +..+-.+-++||+.+||+ .|+.
T Consensus 285 rG~s~yp~~~~~~ldl~~i~~lk~~~~-lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~ 347 (385)
T 3nvt_A 285 RGIRTYEKATRNTLDISAVPILKKETH-LPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEV 347 (385)
T ss_dssp CCBCCSCCSSSSBCCTTHHHHHHHHBS-SCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEB
T ss_pred CCCCCCCCCCccccCHHHHHHHHHhcC-CCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEe
Confidence 5222222 2221 12455777543 34 4447774 234445678999999999 8876
No 76
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=95.77 E-value=0.85 Score=41.25 Aligned_cols=178 Identities=13% Similarity=0.037 Sum_probs=101.6
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe--C---Ch-----HhHHHHHH
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT--P---NL-----KGFEAAIA 212 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~--~---n~-----~gie~a~~ 212 (359)
...+.++..++.+...+.|+..+-+ +|.++ ....+.+. ++++...+ | +. ..+++|++
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v----~~~~v------~~~~~~l~---~v~v~~v~~~P~g~~~~~~k~~~~~~A~~ 81 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCV----NPYHV------KLASSIAK---KVKVCCVIGFPLGLNKTSVKVKEAVEAVR 81 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEE----CGGGH------HHHHHHCS---SSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEE----CHHHH------HHHHHHhc---CCceeeEecCCCCccchhhhHHHHHHHHH
Confidence 3478899999999999999988753 23221 11222332 56665554 2 11 24568899
Q ss_pred cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 213 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
.|++.|.+.+..+-. + ....+..++.++.+.+.+. ++.+ -+... . ...+++.+.++++.+.++|+|
T Consensus 82 ~Gad~Id~viN~g~~----~-~~~~~~~~~~i~~v~~a~~--pv~v--Kvi~e--~---~~l~~~~~~~~a~~a~eaGad 147 (225)
T 1mzh_A 82 DGAQELDIVWNLSAF----K-SEKYDFVVEELKEIFRETP--SAVH--KVIVE--T---PYLNEEEIKKAVEICIEAGAD 147 (225)
T ss_dssp TTCSEEEEECCHHHH----H-TTCHHHHHHHHHHHHHTCT--TSEE--EEECC--G---GGCCHHHHHHHHHHHHHHTCS
T ss_pred cCCCEEEEEecHHHH----h-cCChHHHHHHHHHHHHHhc--CceE--EEEEe--C---CCCCHHHHHHHHHHHHHhCCC
Confidence 999999986654431 1 1123444444444443332 3333 23211 1 125778899999999999999
Q ss_pred EEEEcCC---CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEecee
Q 018252 293 EISLGDT---IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 293 ~I~L~DT---~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl 354 (359)
-| ...| .|-.+++.++.+.+.+.. .++|-.=+=-. ...-+++.+++||++|-++.
T Consensus 148 ~I-~tstg~~~gga~~~~i~~v~~~v~~---~ipVia~GGI~---t~~da~~~l~aGA~~iG~s~ 205 (225)
T 1mzh_A 148 FI-KTSTGFAPRGTTLEEVRLIKSSAKG---RIKVKASGGIR---DLETAISMIEAGADRIGTSS 205 (225)
T ss_dssp EE-ECCCSCSSSCCCHHHHHHHHHHHTT---SSEEEEESSCC---SHHHHHHHHHTTCSEEEESC
T ss_pred EE-EECCCCCCCCCCHHHHHHHHHHhCC---CCcEEEECCCC---CHHHHHHHHHhCchHHHHcc
Confidence 99 3344 233455555444443322 23333222111 14678888899999886654
No 77
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=95.75 E-value=0.2 Score=48.28 Aligned_cols=199 Identities=17% Similarity=0.154 Sum_probs=102.7
Q ss_pred cEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcCCCCCHHHHHHH---hhh----cCCC
Q 018252 127 VKIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSF-VSPKWVPQLADARDVMEA---VRD----LEGA 195 (359)
Q Consensus 127 V~I~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~f-vspk~vPq~~D~~ev~~~---l~~----~~~~ 195 (359)
+=|+.+|+ =||.+ .++.+.-++.++.+.+.|.++|+||.- ..|. +.....+|+.+. ++. .+++
T Consensus 45 MGIlNvTPDSFsdgg~----~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG--~~v~~~eEl~Rv~pvI~~l~~~~~~v 118 (318)
T 2vp8_A 45 MAIVNRTPDSFYDKGA----TFSDAAARDAVHRAVADGADVIDVGGVKAGPG--ERVDVDTEITRLVPFIEWLRGAYPDQ 118 (318)
T ss_dssp EEEEC------------------CHHHHHHHHHHHHTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHSTTC
T ss_pred EEEEeCCCCcccCCCc----cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCC--CCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 34666655 56644 457788999999999999999999962 2332 112223443222 332 2377
Q ss_pred eEEEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCC--
Q 018252 196 RLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-PVEG-- 272 (359)
Q Consensus 196 ~l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-~~~~-- 272 (359)
.++.=+.+.+-++.|+++|++.|+=.-.. . + .++++.++++|..+. +++.-|. |..-
T Consensus 119 pISIDT~~~~VaeaAl~aGa~iINDVsg~-----------~-d------~~m~~vaa~~g~~vV--lmh~~G~~p~tmq~ 178 (318)
T 2vp8_A 119 LISVDTWRAQVAKAACAAGADLINDTWGG-----------V-D------PAMPEVAAEFGAGLV--CAHTGGALPRTRPF 178 (318)
T ss_dssp EEEEECSCHHHHHHHHHHTCCEEEETTSS-----------S-S------TTHHHHHHHHTCEEE--EECC----------
T ss_pred eEEEeCCCHHHHHHHHHhCCCEEEECCCC-----------C-c------hHHHHHHHHhCCCEE--EECCCCCCcccccc
Confidence 77776777888999999999966542211 0 0 134555667787652 3332222 2110
Q ss_pred C--CC----------HHHHHHHHHHHHHCCcC--EEEEcCCCCCC-cHHHHHHHHHHHHH----hCCCceEEE-------
Q 018252 273 A--IP----------PSKVAYVAKELHDMGCF--EISLGDTIGVG-TPGTVVPMLEAVMA----VVPVEKLAV------- 326 (359)
Q Consensus 273 r--~~----------~e~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P~~v~~lv~~l~~----~~p~~~L~~------- 326 (359)
+ +. .+++.+.++.+.++|+. .|.|==-+|.. +.++-.++++.+.+ .+| +-+++
T Consensus 179 ~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG~GF~Kt~~~nl~ll~~l~~l~~lg~P-vL~G~SrKsfig 257 (318)
T 2vp8_A 179 RVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWP-VLMALSNKDVVG 257 (318)
T ss_dssp ---CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTTTCCTTSHHHHHHHHTHHHHHTTSSC-BEECCC------
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcCCCCcccCHHHHHHHHHHHHHHHhCCCC-EEEEeCcchhhh
Confidence 1 10 15666778888899986 45543333332 34455556655553 123 11111
Q ss_pred -----EeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 327 -----HLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 327 -----H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
-..+-..-.+|-+..|+..||++|.+
T Consensus 258 ~~~g~~~~~r~~~t~a~~~~a~~~Ga~IvRv 288 (318)
T 2vp8_A 258 ETLGVDLTERLEGTLAATALAAAAGARMFRV 288 (318)
T ss_dssp ---------CHHHHHHHHHHHHHTTCCEEEE
T ss_pred hhcCCChHHhHHHHHHHHHHHHHCCCeEEEc
Confidence 12223333456777889999999865
No 78
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=95.69 E-value=0.098 Score=50.25 Aligned_cols=141 Identities=15% Similarity=0.147 Sum_probs=89.0
Q ss_pred cEEEeCCCc---cc--CCCCCCCCCH-HHHHHHHHHHHhCCCCEEEEec-cCCCCCcCCCCCHHHHHHHhh---hcCCCe
Q 018252 127 VKIVEVGPR---DG--LQNEKNTVPT-GVKVELIRRLVSSGLPVVEATS-FVSPKWVPQLADARDVMEAVR---DLEGAR 196 (359)
Q Consensus 127 V~I~D~TLR---DG--~Q~~~~~~~~-~~k~~ia~~L~~aGv~~IEvG~-fvspk~vPq~~D~~ev~~~l~---~~~~~~ 196 (359)
+-|+|+|+= || .+.. +. +.-++.++.+.+.|.+.|.+|. ...|...| -+.++.++.++ +.-++.
T Consensus 51 m~I~n~tpdsf~d~i~~~~~----~~~~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~--vs~eee~~vV~~v~~~~~vp 124 (310)
T 2h9a_B 51 LEVFDTPPTDWPDILVEPFK----DVINDPVAWAKKCVEYGADIVALRLVSAHPDGQN--RSGAELAEVCKAVADAIDVP 124 (310)
T ss_dssp EEEESSCCSSCCHHHHGGGT----TTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTC--CCHHHHHHHHHHHHHHCSSC
T ss_pred EEEeeCCCcccchhhhhhhc----cHHHHHHHHHHHHHHcCCcEEEEeCccCCCCCCC--CCHHHHHHHHHHHHHhCCce
Confidence 468888775 66 3332 22 5778888999999999999997 34454322 23344344443 334666
Q ss_pred EEE-Ee----CChHhHHHHHHcCCC---EEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC
Q 018252 197 LPV-LT----PNLKGFEAAIAAGAK---EVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC 268 (359)
Q Consensus 197 l~~-l~----~n~~gie~a~~aGv~---~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~ 268 (359)
++. =+ .+.+-++.|+++|.+ -|+=. +.. +...++..|+++|..+.+ + .
T Consensus 125 lsI~DT~~~~~~~~V~eaal~aga~~k~iINdv---s~~---------------~~~~~~~~aa~~g~~vv~--m----~ 180 (310)
T 2h9a_B 125 LMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSA---TKD---------------NYKPIVATCMVHGHSVVA--S----A 180 (310)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEE---CTT---------------THHHHHHHHHHHTCEEEE--E----C
T ss_pred EEEECCCCCCCCHHHHHHHHHhCCCCCCEEEEC---CCC---------------ccHHHHHHHHHhCCCEEE--E----C
Confidence 665 44 334568999999886 33321 111 123556677788887632 2 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCc--CEEEEcCCCC
Q 018252 269 PVEGAIPPSKVAYVAKELHDMGC--FEISLGDTIG 301 (359)
Q Consensus 269 ~~~~r~~~e~l~~~a~~l~~~Ga--d~I~L~DT~G 301 (359)
+ -+.+++.+..+.+.++|+ +.|.|==.+|
T Consensus 181 ~----~dv~~l~~~~~~a~~~Gi~~e~IilDPg~g 211 (310)
T 2h9a_B 181 P----LDINLSKQLNIMIMEMNLAPNRIIMDPLIG 211 (310)
T ss_dssp S----SCHHHHHHHHHHHHTTTCCGGGEEEECCCC
T ss_pred h----hHHHHHHHHHHHHHHCCCChhhEEEeCCCc
Confidence 1 157899999999999998 5677655555
No 79
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=95.68 E-value=0.15 Score=48.57 Aligned_cols=125 Identities=12% Similarity=0.062 Sum_probs=83.1
Q ss_pred hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 018252 206 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 285 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~ 285 (359)
.++.|++.|++.|.+.+-.. .....+.++.+.++++.|+++|+++.+. ...|... ..+++.+...++.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~G--------s~~~~~~l~~i~~v~~~a~~~GlpvIie--~~~G~~~--~~d~e~i~~aari 197 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIG--------SEYEHQSIKNIIQLVDAGMKVGMPTMAV--TGVGKDM--VRDQRYFSLATRI 197 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTT--------STTHHHHHHHHHHHHHHHHTTTCCEEEE--ECC------CCSHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEEECC--------CCcHHHHHHHHHHHHHHHHHcCCEEEEE--CCCCCcc--CCCHHHHHHHHHH
Confidence 58999999999987754211 1224567888999999999999987532 1111111 2578888889999
Q ss_pred HHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEe--CCCCCcHHHHHHHHHHcCCCEEec
Q 018252 286 LHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHL--HDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 286 l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~--HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
+.++|+|.|-..=| ++. ++.+.+..+ +++-+=+ +-+.--.+.++-.|+++||+.+-+
T Consensus 198 A~elGAD~VKt~~t-----~e~----~~~vv~~~~-vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~v 256 (295)
T 3glc_A 198 AAEMGAQIIKTYYV-----EKG----FERIVAGCP-VPIVIAGGKKLPEREALEMCWQAIDQGASGVDM 256 (295)
T ss_dssp HHHTTCSEEEEECC-----TTT----HHHHHHTCS-SCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHhCCCEEEeCCC-----HHH----HHHHHHhCC-CcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEe
Confidence 99999999888743 333 344554443 3444433 223345678888999999986643
No 80
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=95.68 E-value=0.43 Score=44.95 Aligned_cols=200 Identities=12% Similarity=0.118 Sum_probs=111.8
Q ss_pred cEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEec-cCCCCCcCCCCCHHHH---HHHhhhc--CCCeE
Q 018252 127 VKIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATS-FVSPKWVPQLADARDV---MEAVRDL--EGARL 197 (359)
Q Consensus 127 V~I~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~-fvspk~vPq~~D~~ev---~~~l~~~--~~~~l 197 (359)
+=|+.+|+ =|| |..++.+.-++-++.|.+.|.++|++|. ...|.+-|. ...+|+ ...++.+ +++.+
T Consensus 10 MGIlNvTPDSFsDG----G~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~v-s~eeE~~Rv~pvi~~l~~~~v~i 84 (270)
T 4hb7_A 10 MGILNVTPDSFSDG----GKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMV-TLEEELNRVLPVVEAIVGFDVKI 84 (270)
T ss_dssp EEEEECC--------------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCC-CHHHHHHHHHHHHHHHTTSSSEE
T ss_pred EEEEeCCCCCCCCC----CCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCC-chHHHHHHHHHHHHHhhcCCCeE
Confidence 34566654 355 4457788999999999999999999996 344543222 222333 3333333 45666
Q ss_pred EEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCC--
Q 018252 198 PVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP-- 275 (359)
Q Consensus 198 ~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~-- 275 (359)
++=+...+=.+.|+++|++.|+=... .+ .+ .++++.+.++|..+ .+++.-+.|.....-
T Consensus 85 SIDT~~~~Va~~al~aGa~iINDVs~---g~--------~d------~~m~~~va~~~~~~--vlMH~~~~p~~~~vv~e 145 (270)
T 4hb7_A 85 SVDTFRSEVAEACLKLGVDMINDQWA---GL--------YD------HRMFQIVAKYDAEI--ILMHNGNGNRDEPVVEE 145 (270)
T ss_dssp EEECSCHHHHHHHHHHTCCEEEETTT---TS--------SC------THHHHHHHHTTCEE--EEECCCSSCCSSCHHHH
T ss_pred EEECCCHHHHHHHHHhccceeccccc---cc--------cc------hhHHHHHHHcCCCe--EEeccccCCccccchhH
Confidence 55556667789999999998774211 00 00 03345556777765 345433433211111
Q ss_pred -HHHHHHHHHHHHHCCcC--EEEEcCCCCCC-cHHHHHHHHHHHHHh----CCCceEEE-------E--eCC-----CCC
Q 018252 276 -PSKVAYVAKELHDMGCF--EISLGDTIGVG-TPGTVVPMLEAVMAV----VPVEKLAV-------H--LHD-----TYG 333 (359)
Q Consensus 276 -~e~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P~~v~~lv~~l~~~----~p~~~L~~-------H--~HN-----d~G 333 (359)
.+++.+.++.+.++|+. .|.|==-+|.+ ++++=.++++.+.+- +| +-+++ + ..+ .+.
T Consensus 146 v~~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~~~~lg~P-vLvG~SRKsfig~~lg~~~~~~~R~~ 224 (270)
T 4hb7_A 146 MLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYP-VLLATSRKRFTKEMMGYDTTPVERDE 224 (270)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHHHHHTTCSC-BEECCTTSHHHHHHHCSCCCSGGGHH
T ss_pred HHHHHHHHHHHHHHcCCCCceEEEeCCCCcccccccHHHHHhhHHHHhcCCCC-EEEEecHHHHHHHHhCCCCChHHhhH
Confidence 23455566778889984 56664456655 466666777666542 34 22221 0 111 122
Q ss_pred cHHHHHHHHHHcCCCEEe
Q 018252 334 QSLPNILISLQVSPMHAK 351 (359)
Q Consensus 334 LAlANalaAv~AGa~~ID 351 (359)
-.+|.+..|+..||++|-
T Consensus 225 gt~a~~~~a~~~Ga~ivR 242 (270)
T 4hb7_A 225 VTAATTAYGIMKGVRAVR 242 (270)
T ss_dssp HHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHCCCCEEE
Confidence 235667778899999874
No 81
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.58 E-value=0.067 Score=48.08 Aligned_cols=167 Identities=15% Similarity=0.096 Sum_probs=94.1
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc-CCCeEEEEe---CCh-HhHHHHHHcCCCEE
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLT---PNL-KGFEAAIAAGAKEV 218 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~-~~~~l~~l~---~n~-~gie~a~~aGv~~V 218 (359)
..+.++-+++++.+ +.|++.+|+|+.-. +....++.+.+++. ++..+..-+ ... .-++.+.++|++.|
T Consensus 15 ~~~~~~~~~~~~~~-~~~vd~ie~g~~~~------~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i 87 (218)
T 3jr2_A 15 QTNLTDAVAVASNV-ASYVDVIEVGTILA------FAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWI 87 (218)
T ss_dssp CSSHHHHHHHHHHH-GGGCSEEEECHHHH------HHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEE
T ss_pred CCCHHHHHHHHHHh-cCCceEEEeCcHHH------HhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEE
Confidence 35688899999997 56999999997311 01112345556554 555443322 222 45788899999998
Q ss_pred EEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc-
Q 018252 219 AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG- 297 (359)
Q Consensus 219 ~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~- 297 (359)
.+..-..+ +.+.++++.++++|+++.+.+ .+ ..+++... .+.+.|+|.+.+.
T Consensus 88 ~vh~~~~~---------------~~~~~~~~~~~~~g~~~~~d~---l~-----~~T~~~~~----~~~~~g~d~v~~~~ 140 (218)
T 3jr2_A 88 TVSAAAHI---------------ATIAACKKVADELNGEIQIEI---YG-----NWTMQDAK----AWVDLGITQAIYHR 140 (218)
T ss_dssp EEETTSCH---------------HHHHHHHHHHHHHTCEEEEEC---CS-----SCCHHHHH----HHHHTTCCEEEEEC
T ss_pred EEecCCCH---------------HHHHHHHHHHHHhCCccceee---ee-----cCCHHHHH----HHHHcCccceeeee
Confidence 88653221 124466777788898763211 11 22454433 3445699976551
Q ss_pred ----CCCCC-CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 298 ----DTIGV-GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 298 ----DT~G~-~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
...|. ..|..+ +.++.++. ++.++.+= -|-...|+-.++++||+.|=
T Consensus 141 ~~~~~~~g~~~~~~~l-~~i~~~~~--~~~pi~v~----GGI~~~~~~~~~~aGAd~vv 192 (218)
T 3jr2_A 141 SRDAELAGIGWTTDDL-DKMRQLSA--LGIELSIT----GGIVPEDIYLFEGIKTKTFI 192 (218)
T ss_dssp CHHHHHHTCCSCHHHH-HHHHHHHH--TTCEEEEE----SSCCGGGGGGGTTSCEEEEE
T ss_pred ccccccCCCcCCHHHH-HHHHHHhC--CCCCEEEE----CCCCHHHHHHHHHcCCCEEE
Confidence 11122 223333 23333332 34455553 34445566789999998864
No 82
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=95.54 E-value=0.27 Score=43.84 Aligned_cols=181 Identities=18% Similarity=0.120 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEE--eCChHhHHHHHHcCCCEEEEecCCc
Q 018252 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL--TPNLKGFEAAIAAGAKEVAIFASAS 225 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l--~~n~~gie~a~~aGv~~V~i~~s~S 225 (359)
++-.++++.+.+.|++.|++.-..... +......+.++.+++..++.+.+- +.+..+++.++++|++.|.+-..
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~--~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~-- 108 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAP--EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTA-- 108 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCT--TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHH--
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccc--cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChH--
Confidence 356889999999999999986432110 111111223344443334444433 34668899999999999988532
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCc-EEEEEeee------ecCCCCCCC-CHHHHHHHHHHHHHCCcCEEEE-
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP-VRGYVSCV------VGCPVEGAI-PPSKVAYVAKELHDMGCFEISL- 296 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~-V~~~is~~------fg~~~~~r~-~~e~l~~~a~~l~~~Gad~I~L- 296 (359)
. +.....+.+.++.+|.+ +...+..- .-....+.. +.....+.++.+.+.|++.|.+
T Consensus 109 -~-------------~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~ 174 (253)
T 1h5y_A 109 -A-------------VRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLT 174 (253)
T ss_dssp -H-------------HHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEE
T ss_pred -H-------------hhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEe
Confidence 1 11111222333445542 32222210 000001110 0012345677888899999887
Q ss_pred -cCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEEec
Q 018252 297 -GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHAKP 352 (359)
Q Consensus 297 -~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~ID~ 352 (359)
.+..|..... -.++++.+++..+ +++-.= -|.. ..++..++++||+.|=+
T Consensus 175 ~~~~~g~~~~~-~~~~i~~l~~~~~-~pvia~----GGi~~~~~~~~~~~~Ga~~v~v 226 (253)
T 1h5y_A 175 SIDRDGTGLGY-DVELIRRVADSVR-IPVIAS----GGAGRVEHFYEAAAAGADAVLA 226 (253)
T ss_dssp ETTTTTTCSCC-CHHHHHHHHHHCS-SCEEEE----SCCCSHHHHHHHHHTTCSEEEE
T ss_pred cccCCCCcCcC-CHHHHHHHHHhcC-CCEEEe----CCCCCHHHHHHHHHcCCcHHHH
Confidence 4443433221 1345566666543 455443 3444 47888888999997643
No 83
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=95.54 E-value=0.47 Score=44.29 Aligned_cols=179 Identities=15% Similarity=0.134 Sum_probs=110.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcC-CCCC-HHHHHHHhhh---cCCCeEEEEeCChHhHHHHHHcCCCEEE
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVP-QLAD-ARDVMEAVRD---LEGARLPVLTPNLKGFEAAIAAGAKEVA 219 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vP-q~~D-~~ev~~~l~~---~~~~~l~~l~~n~~gie~a~~aGv~~V~ 219 (359)
=+.+.-+++++.+.++|.+.|=.++| .|+.-| +... .++-++.+++ -.++.+..=.-+...++.+.+. ++.+.
T Consensus 34 ~~~e~a~~~a~~l~~~Ga~~vk~~~f-kprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~k 111 (262)
T 1zco_A 34 ESREQIMKVAEFLAEVGIKVLRGGAF-KPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDTRHVELVAKY-SDILQ 111 (262)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSS-CCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH-CSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEec-ccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh-CCEEE
Confidence 46999999999999999999988876 222222 1111 0222333332 2345444433366778877777 88887
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCC-CHHHHHHHHHHHHHCCcCEEEEcC
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAI-PPSKVAYVAKELHDMGCFEISLGD 298 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~-~~e~l~~~a~~l~~~Gad~I~L~D 298 (359)
+-... ..| . ++++++.+.|.+|. +.. +.. +++.+...++.+...|...|.|+-
T Consensus 112 Iga~~-----~~n--------~----~ll~~~a~~~kPV~------lk~---G~~~t~~e~~~Av~~i~~~Gn~~i~L~~ 165 (262)
T 1zco_A 112 IGARN-----SQN--------F----ELLKEVGKVENPVL------LKR---GMGNTIQELLYSAEYIMAQGNENVILCE 165 (262)
T ss_dssp ECGGG-----TTC--------H----HHHHHHTTSSSCEE------EEC---CTTCCHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred ECccc-----ccC--------H----HHHHHHHhcCCcEE------Eec---CCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 74321 111 1 33444445788884 222 233 899999999999999988777776
Q ss_pred ----CC-CCCcHHHHH-HHHHHHHHhCCCceE-EEEeCCCCCc---HHHHHHHHHHcCCC--EEecee
Q 018252 299 ----TI-GVGTPGTVV-PMLEAVMAVVPVEKL-AVHLHDTYGQ---SLPNILISLQVSPM--HAKPCF 354 (359)
Q Consensus 299 ----T~-G~~~P~~v~-~lv~~l~~~~p~~~L-~~H~HNd~GL---AlANalaAv~AGa~--~ID~tl 354 (359)
++ ++ .+..+. .-+..+++.+. .++ +.=.|- .|. .-.-+.+|+..||+ .|+.=+
T Consensus 166 RG~~~~~~y-~~~~v~L~ai~~lk~~~~-~pVi~d~sH~-~g~~~~v~~~~~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 166 RGIRTFETA-TRFTLDISAVPVVKELSH-LPIIVDPSHP-AGRRSLVIPLAKAAYAIGADGIMVEVHP 230 (262)
T ss_dssp CCBCCSCCS-SSSBCCTTHHHHHHHHBS-SCEEECSSTT-TCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCCCCCCCc-ChhhcCHHHHHHHHhhhC-CCEEEEcCCC-CCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 54 44 455554 56677777653 354 444443 233 12457779999999 887643
No 84
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=95.50 E-value=0.44 Score=42.94 Aligned_cols=173 Identities=14% Similarity=0.056 Sum_probs=96.6
Q ss_pred HHHHHHHHHHhCCCCEEEEe----ccCCCCCcCCCCCHHHHHHHhhhcCCCeEEE--EeCChHhHHHHHHcCCCEEEEec
Q 018252 149 VKVELIRRLVSSGLPVVEAT----SFVSPKWVPQLADARDVMEAVRDLEGARLPV--LTPNLKGFEAAIAAGAKEVAIFA 222 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG----~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~--l~~n~~gie~a~~aGv~~V~i~~ 222 (359)
+-.++++.+.++|++.|.+- .|.. .... ++++.+++..+..+.+ .+++.++++.++++|++.|.+-.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~-----~~~~--~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~ 105 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGT-----GDNR--ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGT 105 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTS-----CCCH--HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcC-----CChH--HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECc
Confidence 56788899999999999883 3322 1223 4455555444554433 34677889999999999988742
Q ss_pred CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeee---ecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCC
Q 018252 223 SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV---VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299 (359)
Q Consensus 223 s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~---fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT 299 (359)
. . +.....+.+..+.+|..+...+.+- +-.......+. ...++++.+.+.|++.|.+-+.
T Consensus 106 ~---~-------------l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~-~~~e~~~~~~~~G~~~i~~~~~ 168 (244)
T 1vzw_A 106 A---A-------------LETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGG-DLYETLDRLNKEGCARYVVTDI 168 (244)
T ss_dssp H---H-------------HHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCC-BHHHHHHHHHHTTCCCEEEEEC
T ss_pred h---H-------------hhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCC-CHHHHHHHHHhCCCCEEEEecc
Confidence 2 1 1111122333344454444344321 00000001111 3456778888899998877653
Q ss_pred C--CCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHH-HHHHHHHHc---CCCEEe
Q 018252 300 I--GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL-PNILISLQV---SPMHAK 351 (359)
Q Consensus 300 ~--G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAl-ANalaAv~A---Ga~~ID 351 (359)
. |..... -.++++.+++..+ +++-. +=|... .++..++++ ||+.|-
T Consensus 169 ~~~~~~~g~-~~~~~~~i~~~~~-ipvia----~GGI~~~~d~~~~~~~~~~Gadgv~ 220 (244)
T 1vzw_A 169 AKDGTLQGP-NLELLKNVCAATD-RPVVA----SGGVSSLDDLRAIAGLVPAGVEGAI 220 (244)
T ss_dssp -------CC-CHHHHHHHHHTCS-SCEEE----ESCCCSHHHHHHHHTTGGGTEEEEE
T ss_pred CcccccCCC-CHHHHHHHHHhcC-CCEEE----ECCCCCHHHHHHHHhhccCCCceee
Confidence 2 221111 2355666666543 45544 246664 888888888 988654
No 85
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.45 E-value=1.5 Score=41.12 Aligned_cols=186 Identities=9% Similarity=0.030 Sum_probs=105.7
Q ss_pred HHHHHHHHhCCCCEEEEecc-CCCC-CcCC-----------------CCCHHHHHHHhhh----c-CCCeE-EEEe-CCh
Q 018252 151 VELIRRLVSSGLPVVEATSF-VSPK-WVPQ-----------------LADARDVMEAVRD----L-EGARL-PVLT-PNL 204 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~f-vspk-~vPq-----------------~~D~~ev~~~l~~----~-~~~~l-~~l~-~n~ 204 (359)
.+..+.+.+.|+-.|++++. ..|. ..|. ....+.+.+.++. . ++..+ .-+. .+.
T Consensus 26 ~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~~p~~~~i~g~~~ 105 (311)
T 1jub_A 26 IEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSA 105 (311)
T ss_dssp HHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHHTCSSSCCEEEECCSSH
T ss_pred HHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCCH
Confidence 36667889999999998862 2220 0011 1123444444432 1 13222 2222 343
Q ss_pred Hh----HHHHHHcCCC-EEEEec--CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCH
Q 018252 205 KG----FEAAIAAGAK-EVAIFA--SASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPP 276 (359)
Q Consensus 205 ~g----ie~a~~aGv~-~V~i~~--s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~-G~~V~~~is~~fg~~~~~r~~~ 276 (359)
++ ++++.++|++ .|.+-+ |..+ ....++.+.+ .+.++++..++. ++++.+-+. ++ .+.
T Consensus 106 ~~~~~~a~~~~~~g~d~~iein~~~P~~~--g~~~~g~~~e----~~~~iv~~vr~~~~~Pv~vKi~-----~~---~~~ 171 (311)
T 1jub_A 106 AENIAMLKKIQESDFSGITELNLSCPNVP--GEPQLAYDFE----ATEKLLKEVFTFFTKPLGVKLP-----PY---FDL 171 (311)
T ss_dssp HHHHHHHHHHHHSCCCSEEEEESCCCCSS--SCCCGGGCHH----HHHHHHHHHTTTCCSCEEEEEC-----CC---CSH
T ss_pred HHHHHHHHHHHhcCCCeEEEEeccCCCCC--CcccccCCHH----HHHHHHHHHHHhcCCCEEEEEC-----CC---CCH
Confidence 43 4555678999 666643 3321 1112333443 345666666665 566654443 11 377
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCCC----------------------CCcH---HHHHHHHHHHHHhCC-CceEEEEeCC
Q 018252 277 SKVAYVAKELHDMGCFEISLGDTIG----------------------VGTP---GTVVPMLEAVMAVVP-VEKLAVHLHD 330 (359)
Q Consensus 277 e~l~~~a~~l~~~Gad~I~L~DT~G----------------------~~~P---~~v~~lv~~l~~~~p-~~~L~~H~HN 330 (359)
+.+.++++.+.++|+|-|.+.++.+ +..| ....++++.+++.++ +++|-.=+-=
T Consensus 172 ~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI 251 (311)
T 1jub_A 172 VHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGI 251 (311)
T ss_dssp HHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSC
T ss_pred HHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCC
Confidence 7889999999999999999988752 1011 123467888888874 5666654422
Q ss_pred CCCcHHHHHHHHHHcCCCEEece
Q 018252 331 TYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 331 d~GLAlANalaAv~AGa~~ID~t 353 (359)
. .-..+.+++.+||+.|-..
T Consensus 252 ~---~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 252 E---TGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp C---SHHHHHHHHHHTCSEEEEC
T ss_pred C---CHHHHHHHHHcCCCEEEEc
Confidence 2 2246677788999988654
No 86
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=95.42 E-value=0.68 Score=45.27 Aligned_cols=205 Identities=15% Similarity=0.124 Sum_probs=124.3
Q ss_pred cccCCCCC--CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc--CCCCC-------------HHHHHHHhhhcCCCeE
Q 018252 135 RDGLQNEK--NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWV--PQLAD-------------ARDVMEAVRDLEGARL 197 (359)
Q Consensus 135 RDG~Q~~~--~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~v--Pq~~D-------------~~ev~~~l~~~~~~~l 197 (359)
+.+.+..+ +....+....++++-.+++-+.|=-.+...-++. ..+.. .......+.+..++.+
T Consensus 25 ~~~~yAVpAfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A~~~~VPV 104 (358)
T 1dos_A 25 KENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPV 104 (358)
T ss_dssp HHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred HHCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHHHHCCCCE
Confidence 33444443 4567889999999999999998733321000000 01112 1111122222234666
Q ss_pred EEEeCCh-----HhHHHHHHcC-----------CCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEE
Q 018252 198 PVLTPNL-----KGFEAAIAAG-----------AKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGY 261 (359)
Q Consensus 198 ~~l~~n~-----~gie~a~~aG-----------v~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~ 261 (359)
......- ..++.++++| ...|.+=.| ..+.+|+++..++++++|+..|+.|.+.
T Consensus 105 aLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMiDgS----------~~p~eENI~~Tkevv~~ah~~gvsVEaE 174 (358)
T 1dos_A 105 ILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLS----------EESLQENIEICSKYLERMSKIGMTLEIE 174 (358)
T ss_dssp EEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCT----------TSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEECCCCCCccHHHHHHHHHHHHHHHHhcccCCCceEeecCC----------CCCHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 6655421 3466666553 777766333 2356899999999999999999999988
Q ss_pred EeeeecCCCC---------C-CCCHHHHHHHHHHHHHCCcC-EEEEcCCCCCC-----------cHHHHHHHHHHHHHhC
Q 018252 262 VSCVVGCPVE---------G-AIPPSKVAYVAKELHDMGCF-EISLGDTIGVG-----------TPGTVVPMLEAVMAVV 319 (359)
Q Consensus 262 is~~fg~~~~---------~-r~~~e~l~~~a~~l~~~Gad-~I~L~DT~G~~-----------~P~~v~~lv~~l~~~~ 319 (359)
|-..=|.+|. . .++|++..++++++. |+| ...|+=++|.. .|+.+.++=+.+++.+
T Consensus 175 LG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~tt--gvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~ 252 (358)
T 1dos_A 175 LGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELS--KISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKH 252 (358)
T ss_dssp CCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHH--TTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHH
T ss_pred eccccCcCCCccccccccccccCCHHHHHHHHHHhc--CCChhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHHh
Confidence 8765443432 1 389999999998765 343 33444444433 2344444444444332
Q ss_pred --C--CceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 320 --P--VEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 320 --p--~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
| .++|.+|+= -|........|++.|+.-|+..
T Consensus 253 g~~~~~vpLVlHGg--SG~~~e~i~~ai~~GV~KiNi~ 288 (358)
T 1dos_A 253 NLPHNSLNFVFHGG--SGSTAQEIKDSVSYGVVKMNID 288 (358)
T ss_dssp TCCTTCSCEEECSC--TTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCCCCCCcEEEeCC--CCCCHHHHHHHHHCCCeEEEEc
Confidence 2 267887774 4888889999999999888753
No 87
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=95.38 E-value=0.26 Score=48.14 Aligned_cols=134 Identities=10% Similarity=0.075 Sum_probs=92.2
Q ss_pred CCCeEEEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC
Q 018252 193 EGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG 272 (359)
Q Consensus 193 ~~~~l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~ 272 (359)
.++.+..-.-+.+.++...+.|++.+.|-.. +. .| + ++++++.+.|.+|. |+ .|
T Consensus 90 ~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~--~~---~N--------~----pLL~~va~~gKPvi--Ls-------tG 143 (350)
T 3g8r_A 90 NGFKAICTPFDEESVDLIEAHGIEIIKIASC--SF---TD--------W----PLLERIARSDKPVV--AS-------TA 143 (350)
T ss_dssp TTCEEEEEECSHHHHHHHHHTTCCEEEECSS--ST---TC--------H----HHHHHHHTSCSCEE--EE-------CT
T ss_pred cCCcEEeccCCHHHHHHHHHcCCCEEEECcc--cc---cC--------H----HHHHHHHhhCCcEE--EE-------CC
Confidence 4555544444677888888888898888432 11 12 1 45566667888873 22 13
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEE--cCCCCCCcHHHHHH--HHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCC
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISL--GDTIGVGTPGTVVP--MLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPM 348 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L--~DT~G~~~P~~v~~--lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~ 348 (359)
..+.+++...++.+.+.|.+ |.| |= .++=+|....+ .+..+++.+|++++++=-|-.-+ ..+-+++|+.+||+
T Consensus 144 mstl~Ei~~Ave~i~~~g~~-viLlhC~-s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~-~~~~~~AAvAlGA~ 220 (350)
T 3g8r_A 144 GARREDIDKVVSFMLHRGKD-LTIMHCV-AEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPD-LMEPIMLAVAQGAT 220 (350)
T ss_dssp TCCHHHHHHHHHHHHTTTCC-EEEEECC-CCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCCSS-CCHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHcCCC-EEEEecC-CCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCCCC-ccHHHHHHHHcCCC
Confidence 56999999999999988875 666 64 45655554443 46788999988899998887522 23556899999999
Q ss_pred EEeceee
Q 018252 349 HAKPCFT 355 (359)
Q Consensus 349 ~ID~tl~ 355 (359)
+|+.=++
T Consensus 221 vIEkH~t 227 (350)
T 3g8r_A 221 VFEKHVG 227 (350)
T ss_dssp EEEEEBC
T ss_pred EEEEecC
Confidence 9986544
No 88
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=95.35 E-value=0.18 Score=46.42 Aligned_cols=168 Identities=11% Similarity=0.000 Sum_probs=100.6
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCCh-HhHHHHHHcCCCEEEEecCCchHH
Q 018252 150 KVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNL-KGFEAAIAAGAKEVAIFASASEAF 228 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~-~gie~a~~aGv~~V~i~~s~S~~~ 228 (359)
-.+-++.+.++|++.+++..-. -.++|.+..-..+.+.+++..+..+-.++.+. +-++.+.++|++.|.+..-+.+
T Consensus 28 l~~~i~~~~~~gad~lhvDvmD-G~fvpn~t~G~~~v~~lr~~~~~DvhLMv~~p~~~i~~~~~aGAd~itvH~ea~~-- 104 (237)
T 3cu2_A 28 LNEEVTTLLENQINVLHFDIAD-GQFSSLFTVGAIGIKYFPTHCFKDVHLMVRNQLEVAKAVVANGANLVTLQLEQYH-- 104 (237)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEB-SSSSSCBCBCTHHHHTSCTTSEEEEEEECSCHHHHHHHHHHTTCSEEEEETTCTT--
T ss_pred HHHHHHHHHHcCCCEEEEEEec-CccccchhhhHHHHHHHhhhCCCCeEEEEECHHHHHHHHHHcCCCEEEEecCCcc--
Confidence 3445778889999987664311 11234343323445555543222444555565 5689999999999777654332
Q ss_pred HHhhhcCCHHHHHHHHHHHHHHHHhC---------CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE---
Q 018252 229 SKSNINCSIEDSLVRYRAVAHAAKVL---------SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL--- 296 (359)
Q Consensus 229 ~~~n~~~t~~e~l~~i~~~i~~Ak~~---------G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L--- 296 (359)
.+.++++.++++ |.++...+ +| .++.+.+.++.+ ++|.|.+
T Consensus 105 --------------~~~~~i~~i~~~~~~~~~~~~g~~~gv~l-----~p---~Tp~~~l~~~l~-----~~D~vlvMsv 157 (237)
T 3cu2_A 105 --------------DFALTIEWLAKQKTTYANQVYPVLIGACL-----CP---ETPISELEPYLD-----QIDVIQLLTL 157 (237)
T ss_dssp --------------SHHHHHHHHTTCEEEETTEEEECEEEEEE-----CT---TSCGGGGTTTTT-----TCSEEEEESE
T ss_pred --------------cHHHHHHHHHhcccccccccCCceEEEEE-----eC---CChHHHHHHHhh-----cCceeeeeee
Confidence 123667888888 88775444 22 123333332222 6887644
Q ss_pred -cCCCCCCcHHHHHHHHHHHHHhCC----CceEEEEeCCCCCcHHHHHHHHHH--cCCCEEe
Q 018252 297 -GDTIGVGTPGTVVPMLEAVMAVVP----VEKLAVHLHDTYGQSLPNILISLQ--VSPMHAK 351 (359)
Q Consensus 297 -~DT~G~~~P~~v~~lv~~l~~~~p----~~~L~~H~HNd~GLAlANalaAv~--AGa~~ID 351 (359)
+-..|-.-+....+.++.+++..+ ..+|++ |-|....|+-..++ +||+.+=
T Consensus 158 ~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~v----dGGI~~~~~~~~~~~~aGad~~V 215 (237)
T 3cu2_A 158 DPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINI----DGSMTLELAKYFKQGTHQIDWLV 215 (237)
T ss_dssp ETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEE----ESSCCHHHHHHHHHSSSCCCCEE
T ss_pred ccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEE----ECCcCHHHHHHHHHhCCCCcEEE
Confidence 222233334556666677776653 356666 78999999999999 9998763
No 89
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=95.28 E-value=0.45 Score=45.87 Aligned_cols=140 Identities=16% Similarity=0.030 Sum_probs=87.9
Q ss_pred HHHHHHcCCCEEEEecCC--------chHHHH--hhhcCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCC
Q 018252 207 FEAAIAAGAKEVAIFASA--------SEAFSK--SNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIP 275 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~--------S~~~~~--~n~~~t~~e~l~~i~~~i~~Ak~~-G~~V~~~is~~fg~~~~~r~~ 275 (359)
.++|.++|.|.|.+-.+- |+..++ ..+|-+.++-.+.+.++++..|+. ++.|.+-|+..... .+..+
T Consensus 150 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~--~~g~~ 227 (340)
T 3gr7_A 150 ARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYH--PDGLT 227 (340)
T ss_dssp HHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCS--TTSCC
T ss_pred HHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEecccccc--CCCCC
Confidence 346677899988876542 332222 235667776666667777776664 55666666632111 12356
Q ss_pred HHHHHHHHHHHHHCCcCEEEEcCC--CCC---CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-CCE
Q 018252 276 PSKVAYVAKELHDMGCFEISLGDT--IGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS-PMH 349 (359)
Q Consensus 276 ~e~l~~~a~~l~~~Gad~I~L~DT--~G~---~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG-a~~ 349 (359)
.+...++++.+.++|+|-|.+.+. ... ..|....++++.+++.+. ++|..=+-- .....+..+++.| ||.
T Consensus 228 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~-iPVi~~GgI---~s~e~a~~~L~~G~aD~ 303 (340)
T 3gr7_A 228 AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREAD-IPTGAVGLI---TSGWQAEEILQNGRADL 303 (340)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTT-CCEEEESSC---CCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcC-CcEEeeCCC---CCHHHHHHHHHCCCeeE
Confidence 788999999999999999988652 110 123334567888888875 455443211 1356778899999 998
Q ss_pred Eec
Q 018252 350 AKP 352 (359)
Q Consensus 350 ID~ 352 (359)
|-.
T Consensus 304 V~i 306 (340)
T 3gr7_A 304 VFL 306 (340)
T ss_dssp EEE
T ss_pred EEe
Confidence 754
No 90
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=95.25 E-value=0.5 Score=45.02 Aligned_cols=202 Identities=14% Similarity=0.146 Sum_probs=113.7
Q ss_pred cEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEec-cCCCCCcCCCCCHHHH---HHHhhhc---CCCe
Q 018252 127 VKIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATS-FVSPKWVPQLADARDV---MEAVRDL---EGAR 196 (359)
Q Consensus 127 V~I~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~-fvspk~vPq~~D~~ev---~~~l~~~---~~~~ 196 (359)
+=|+++|+ =||.+ .++.+.-++.++.+.+.|.++|++|. ...|.+.+. ...+|+ ...++.+ .++.
T Consensus 43 MgilNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v-~~~eE~~RvvpvI~~l~~~~~vp 117 (297)
T 1tx2_A 43 MGILNVTPDSFSDGGS----YNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKV-SVEEEIKRVVPMIQAVSKEVKLP 117 (297)
T ss_dssp EEECCCCCCTTCSSCB----HHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCC-CHHHHHHHHHHHHHHHHHHSCSC
T ss_pred EEEEeCCCCccccCCc----cCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCC-CHHHHHHHHHHHHHHHHhcCCce
Confidence 34566665 45543 46788999999999999999999996 233433222 222333 3222322 3677
Q ss_pred EEEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCC--
Q 018252 197 LPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAI-- 274 (359)
Q Consensus 197 l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~-- 274 (359)
++.=+.+.+-++.|+++|.+.|+=.... +. + .++++.++++|..+. +++.-|.|.....
T Consensus 118 iSIDT~~~~V~~aAl~aGa~iINdvsg~---------~~--d------~~m~~~aa~~g~~vV--lmh~~G~p~y~d~v~ 178 (297)
T 1tx2_A 118 ISIDTYKAEVAKQAIEAGAHIINDIWGA---------KA--E------PKIAEVAAHYDVPII--LMHNRDNMNYRNLMA 178 (297)
T ss_dssp EEEECSCHHHHHHHHHHTCCEEEETTTT---------SS--C------THHHHHHHHHTCCEE--EECCCSCCCCSSHHH
T ss_pred EEEeCCCHHHHHHHHHcCCCEEEECCCC---------CC--C------HHHHHHHHHhCCcEE--EEeCCCCCCcchHHH
Confidence 7777778889999999998887542210 00 0 144556677787663 2322222210000
Q ss_pred -CHHHHHHHHHHHHHCCcC--EEEEcCCCCCC-cHHHHHHHHHHHHHhC-CCceEEEEeC--------------CCCCcH
Q 018252 275 -PPSKVAYVAKELHDMGCF--EISLGDTIGVG-TPGTVVPMLEAVMAVV-PVEKLAVHLH--------------DTYGQS 335 (359)
Q Consensus 275 -~~e~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P~~v~~lv~~l~~~~-p~~~L~~H~H--------------Nd~GLA 335 (359)
-.+++.+.++.+.++|+. .|.|==.+|.+ +.++-.++++.+..-- .+.|+-+=.+ +..+-.
T Consensus 179 ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk~~~~n~~ll~~l~~l~~lg~Pvl~G~Srksfig~~~g~~~~~r~~~t 258 (297)
T 1tx2_A 179 DMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGT 258 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEEECTTCHHHHHHHTCCGGGCHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCCCHHHHHHHHHHHHHHHhCCCCEEEEeccchhhhhhcCCCHHHhHHHH
Confidence 035677788888899987 55543222322 3444556666555311 1233333222 222334
Q ss_pred HHHHHHHHHcCCCEEec
Q 018252 336 LPNILISLQVSPMHAKP 352 (359)
Q Consensus 336 lANalaAv~AGa~~ID~ 352 (359)
++-+..|+..||++|.+
T Consensus 259 ~a~~~~a~~~ga~Ivrv 275 (297)
T 1tx2_A 259 GATVCLGIEKGCEFVRV 275 (297)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCcEEEe
Confidence 55777888999999875
No 91
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=95.24 E-value=0.083 Score=49.41 Aligned_cols=189 Identities=13% Similarity=0.113 Sum_probs=108.0
Q ss_pred CcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhh---hcCCCeEEEEeCChHhHHHH
Q 018252 134 PRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR---DLEGARLPVLTPNLKGFEAA 210 (359)
Q Consensus 134 LRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~---~~~~~~l~~l~~n~~gie~a 210 (359)
+.||.+ ..+.+.-++.++.+.+.|.++|++|....+ ....+++.+.++ ...++.++.=+.+.+-++.|
T Consensus 15 Fsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIg~g~~~-----v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aA 85 (262)
T 1f6y_A 15 IKRAIQ----ERDPAPVQEWARRQEEGGARALDLNVGPAV-----QDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAG 85 (262)
T ss_dssp HHHHHH----HTCHHHHHHHHHHHHHHTCSEEEEBCC---------CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred HHHhhh----cCCHHHHHHHHHHHHHCCCcEEEECCCCCC-----CChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHH
Confidence 455544 367889999999999999999999974322 123344444444 33466666666777889999
Q ss_pred HHc--CCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee---cCCCCCCCCHHHHHHHHHH
Q 018252 211 IAA--GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV---GCPVEGAIPPSKVAYVAKE 285 (359)
Q Consensus 211 ~~a--Gv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~f---g~~~~~r~~~e~l~~~a~~ 285 (359)
+++ |.+.|+=.-.. + +.+.++++.++++|..+. ++ .+ |.|..-...++++.+.++.
T Consensus 86 l~a~~Ga~iINdvs~~-------------~---d~~~~~~~~~a~~~~~vv--lm-h~~~~G~p~t~~~~~~~~~~~~~~ 146 (262)
T 1f6y_A 86 LKKCKNRAMINSTNAE-------------R---EKVEKLFPLAVEHGAALI--GL-TMNKTGIPKDSDTRLAFAMELVAA 146 (262)
T ss_dssp HHHCSSCEEEEEECSC-------------H---HHHHHHHHHHHHTTCEEE--EE-SCCSSCSCSSHHHHHHHHHHHHHH
T ss_pred HhhCCCCCEEEECCCC-------------c---ccHHHHHHHHHHhCCcEE--EE-cCCCCCCCCCHHHHHHHHHHHHHH
Confidence 998 97776632110 1 233455667788888652 22 22 1111000123566777778
Q ss_pred HHHCCcC--EEEEcCCCC---CC--cHHHHHHHHHHHHHhC-CCceEEEEeCCC-CCcH------HHHHHHHHHcCCCEE
Q 018252 286 LHDMGCF--EISLGDTIG---VG--TPGTVVPMLEAVMAVV-PVEKLAVHLHDT-YGQS------LPNILISLQVSPMHA 350 (359)
Q Consensus 286 l~~~Gad--~I~L~DT~G---~~--~P~~v~~lv~~l~~~~-p~~~L~~H~HNd-~GLA------lANalaAv~AGa~~I 350 (359)
+.++|+. .|.|==.+| .. ...++-+.+..+++.+ |+.|+-+=.+|= +|+. -.-+..|+.+|++.+
T Consensus 147 a~~~Gi~~~~IilDPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg~pvl~G~Srksfg~~~~~~l~~t~~~~a~~~g~~~~ 226 (262)
T 1f6y_A 147 ADEFGLPMEDLYIDPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQNCQNRPLINRTFLAMAMACGLMSA 226 (262)
T ss_dssp HHHHTCCGGGEEEECCCCCTTTCTTHHHHHHHHHHHHHTCCSSCCEEEEEGGGGGTTCSSHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHCCCCcccEEEeCCCCcCCCChHHHHHHHHHHHHHHHHhCCCCCEEEeecCCcCCCCHHHHHHHHHHHHHHHHhCCeE
Confidence 8899985 455432333 22 2234444455555556 566666644432 3432 223455667777543
No 92
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=95.22 E-value=0.97 Score=42.75 Aligned_cols=151 Identities=15% Similarity=0.144 Sum_probs=99.0
Q ss_pred CCCHHHHHHHHHHHHhC--CCCEEEEeccCCCCCcCCCCCHHHHHHHhh--hcC-CCeEEEEe--C----Ch----HhHH
Q 018252 144 TVPTGVKVELIRRLVSS--GLPVVEATSFVSPKWVPQLADARDVMEAVR--DLE-GARLPVLT--P----NL----KGFE 208 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~a--Gv~~IEvG~fvspk~vPq~~D~~ev~~~l~--~~~-~~~l~~l~--~----n~----~gie 208 (359)
.-+.++..++.+...+. |+..|-+- |.++ ....+.++ ..+ ++++.+.+ | +. ..++
T Consensus 44 ~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V------~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~ 113 (281)
T 2a4a_A 44 NGTEDDIRELCNESVKTCPFAAAVCVY----PKFV------KFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTE 113 (281)
T ss_dssp TCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGH------HHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCCccEEEEC----HHHH------HHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHH
Confidence 46888999999999998 89888653 3332 23344454 222 67777666 3 11 3678
Q ss_pred HHHHcCCCEEEEecCCchHHHHhhhcCCHH---HHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 018252 209 AAIAAGAKEVAIFASASEAFSKSNINCSIE---DSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 285 (359)
Q Consensus 209 ~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~---e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~ 285 (359)
.|++.|+++|.+.+........ ..+ +..+.+..+.+.+. +..+.+-|. .+. ..+++.+...++.
T Consensus 114 ~Av~~GAdEIDmVinig~lksg-----~~~~~~~v~~eI~~v~~a~~--~~~lKVIlE--t~~----L~d~e~i~~A~~i 180 (281)
T 2a4a_A 114 KALDDGADEIDLVINYKKIIEN-----TDEGLKEATKLTQSVKKLLT--NKILKVIIE--VGE----LKTEDLIIKTTLA 180 (281)
T ss_dssp HHHHHTCSEEEEECCHHHHHHS-----HHHHHHHHHHHHHHHHTTCT--TSEEEEECC--HHH----HCSHHHHHHHHHH
T ss_pred HHHHcCCCEEEEecchHhhhCC-----ChhHHHHHHHHHHHHHHHhc--CCceEEEEe--ccc----CCcHHHHHHHHHH
Confidence 8999999999998865433211 123 55666666666554 343333332 221 3566668899999
Q ss_pred HHHCCcCEEEEcC--CCCCCcHHHHHHHHHHHHH
Q 018252 286 LHDMGCFEISLGD--TIGVGTPGTVVPMLEAVMA 317 (359)
Q Consensus 286 l~~~Gad~I~L~D--T~G~~~P~~v~~lv~~l~~ 317 (359)
+.++|+|-|--.- +.|-++|+++.-+.+.+++
T Consensus 181 a~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~ 214 (281)
T 2a4a_A 181 VLNGNADFIKTSTGKVQINATPSSVEYIIKAIKE 214 (281)
T ss_dssp HHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHH
T ss_pred HHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999887542 2367899999888887754
No 93
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=95.21 E-value=0.17 Score=50.56 Aligned_cols=84 Identities=13% Similarity=0.156 Sum_probs=61.3
Q ss_pred HhHHHHHHcCCCEEEEec-CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFA-SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYV 282 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~-s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~-V~~~is~~fg~~~~~r~~~e~l~~~ 282 (359)
+-++...++|+.+|.+-+ +.++-. ...+|+. ...+.+.++++.+++.|+. +...++ +|.|.. +.+.+.+.
T Consensus 154 e~l~~L~~~G~~rislGvQS~~~~~-l~~i~R~--~~~~~~~~ai~~~r~~G~~~v~~dlI--~GlPge---t~e~~~~t 225 (457)
T 1olt_A 154 DVLDHLRAEGFNRLSMGVQDFNKEV-QRLVNRE--QDEEFIFALLNHAREIGFTSTNIDLI--YGLPKQ---TPESFAFT 225 (457)
T ss_dssp HHHHHHHHTTCCEEEEEEECCCHHH-HHHHTCC--CCHHHHHHHHHHHHHTTCCSCEEEEE--ESCTTC---CHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeccCCHHH-HHHhCCC--CCHHHHHHHHHHHHHcCCCcEEEEEE--cCCCCC---CHHHHHHH
Confidence 567888889999998866 333332 2345542 1245667888899999997 877776 777754 67888999
Q ss_pred HHHHHHCCcCEEEE
Q 018252 283 AKELHDMGCFEISL 296 (359)
Q Consensus 283 a~~l~~~Gad~I~L 296 (359)
++.+.++|++.|.+
T Consensus 226 l~~~~~l~~~~i~~ 239 (457)
T 1olt_A 226 LKRVAELNPDRLSV 239 (457)
T ss_dssp HHHHHHHCCSEEEE
T ss_pred HHHHHhcCcCEEEe
Confidence 99999999998765
No 94
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=95.18 E-value=1 Score=40.57 Aligned_cols=172 Identities=13% Similarity=0.099 Sum_probs=85.7
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCC-Cc-CCC--CCHHHHHHHhhhcCCCe---EEEEeC--------Ch----------
Q 018252 150 KVELIRRLVSSGLPVVEATSFVSPK-WV-PQL--ADARDVMEAVRDLEGAR---LPVLTP--------NL---------- 204 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~fvspk-~v-Pq~--~D~~ev~~~l~~~~~~~---l~~l~~--------n~---------- 204 (359)
-.+.++.+.++|++.||+.. ..|. +. +.+ .+.+++.+.+++ .+++ +.+..+ +.
T Consensus 14 l~~~l~~~~~~G~~~vEl~~-~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~ 91 (285)
T 1qtw_A 14 LANAAIRAAEIDATAFALFT-KNQRQWRAAPLTTQTIDEFKAACEK-YHYTSAQILPHDSYLINLGHPVTEALEKSRDAF 91 (285)
T ss_dssp HHHHHHHHHHTTCSEEECCS-SCSSCSSCCCCCHHHHHHHHHHHHH-TTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeeC-CCCCcCcCCCCCHHHHHHHHHHHHH-cCCCceeEEecCCcccccCCCCHHHHHHHHHHH
Confidence 34566777889999999932 2222 11 111 123344444442 2333 222221 11
Q ss_pred -HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHH--HHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 018252 205 -KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHA--AKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY 281 (359)
Q Consensus 205 -~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~--Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~ 281 (359)
+.++.|.+.|++.|.+....... ..+.++.++++.+.++. +++.|+.+ .+....+.+..--.+++.+.+
T Consensus 92 ~~~i~~A~~lGa~~v~~~~g~~~~------~~~~~~~~~~~~~~l~~l~a~~~gv~l--~lEn~~~~~~~~~~~~~~~~~ 163 (285)
T 1qtw_A 92 IDEMQRCEQLGLSLLNFHPGSHLM------QISEEDCLARIAESINIALDKTQGVTA--VIENTAGQGSNLGFKFEHLAA 163 (285)
T ss_dssp HHHHHHHHHTTCCEEEECCCBCTT------TSCHHHHHHHHHHHHHHHHHHCSSCEE--EEECCCCCTTBCCSSHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECcCCCCC------CCCHHHHHHHHHHHHHHHHhccCCCEE--EEecCCCCCCcccCCHHHHHH
Confidence 12445556799988775432110 11344444444443333 34456544 444322211111247888888
Q ss_pred HHHHHHHCCcCEEE-EcCC-----CC--CCcHHHHHHHHHHHHHhCC-CceEEEEeCCCCC
Q 018252 282 VAKELHDMGCFEIS-LGDT-----IG--VGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYG 333 (359)
Q Consensus 282 ~a~~l~~~Gad~I~-L~DT-----~G--~~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~G 333 (359)
+++.+. +.+.+. +-|| .| ...|..+.+.++.+.+..+ +....+|.||..+
T Consensus 164 l~~~v~--~~~~~g~~~D~~H~~~~g~~~~~~~~~~~~~~~~~~~~g~~~i~~vH~~D~~~ 222 (285)
T 1qtw_A 164 IIDGVE--DKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKS 222 (285)
T ss_dssp HHHHCS--CGGGEEEEEEHHHHHHHTCCCSSHHHHHHHHHHHHHHTCGGGEEEEEECEESS
T ss_pred HHHhhc--CccceEEEEEhHhHHHcCCCcCChHHHHHHHHHHHHhcCccceeEEEEecCCC
Confidence 877651 222111 2354 23 2345577778888877665 5578899987643
No 95
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=95.16 E-value=0.19 Score=49.00 Aligned_cols=203 Identities=14% Similarity=0.048 Sum_probs=120.8
Q ss_pred ccCCCCC--CCCCHHHHHHHHHHHHhCCCCEEEEec-----cCCCCCcCCCCC----HHHHHHHh---hhcCCCeEEEEe
Q 018252 136 DGLQNEK--NTVPTGVKVELIRRLVSSGLPVVEATS-----FVSPKWVPQLAD----ARDVMEAV---RDLEGARLPVLT 201 (359)
Q Consensus 136 DG~Q~~~--~~~~~~~k~~ia~~L~~aGv~~IEvG~-----fvspk~vPq~~D----~~ev~~~l---~~~~~~~l~~l~ 201 (359)
.+.+..+ +....+....++++-.+++-+.|=-.+ +...+. +.+ ...+...+ .+.-++.+....
T Consensus 18 ~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~g~~---~~~~v~g~~~~a~~v~~~A~~~~VPVaLHl 94 (349)
T 3elf_A 18 QNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLG---VKDMVTGAVALAEFTHVIAAKYPVNVALHT 94 (349)
T ss_dssp HTTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHCTT---TCCHHHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred HcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcCcch---hhhhhhhHHHHHHHHHHHHHHCCCCEEEEC
Confidence 3444443 346788999999999999999873322 111111 111 11122222 222345555555
Q ss_pred CCh--H---------------hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEee
Q 018252 202 PNL--K---------------GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSC 264 (359)
Q Consensus 202 ~n~--~---------------gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~ 264 (359)
..- . .++.++++|...|.+=.| . .+.+|+++..++++++|+..|+.|.+.|-.
T Consensus 95 DHg~~~~ld~~~~~~l~~~~~~i~~~i~~GFtSVMiDgS--~--------lp~eENi~~Tk~vv~~ah~~gvsVEaElG~ 164 (349)
T 3elf_A 95 DHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGS--A--------VPIDENLAIAQELLKAAAAAKIILEIEIGV 164 (349)
T ss_dssp CCCCGGGGGGTHHHHHHHHHHHHHTTCCCSCSEEEECCT--T--------SCHHHHHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCcccchhhhhhHHHHHHHHHHHhhcCCCEEEecCC--C--------CCHHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence 421 1 122333346777776333 2 246889999999999999999999988875
Q ss_pred eecCCCC--------CCCCHHHHHHHHHHHH--HCCcCEEEEc--CCCCCC-------cHHHHHHHHHHHHHhCC-----
Q 018252 265 VVGCPVE--------GAIPPSKVAYVAKELH--DMGCFEISLG--DTIGVG-------TPGTVVPMLEAVMAVVP----- 320 (359)
Q Consensus 265 ~fg~~~~--------~r~~~e~l~~~a~~l~--~~Gad~I~L~--DT~G~~-------~P~~v~~lv~~l~~~~p----- 320 (359)
.=|.++. -.++|++..+++++.- ..|+|.+.++ -.=|.- .|+.+.++=+.+.+.++
T Consensus 165 iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~ 244 (349)
T 3elf_A 165 VGGEEDGVANEINEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADA 244 (349)
T ss_dssp CBC-------------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTC
T ss_pred cccccCCcccccccccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCcccc
Confidence 4344332 2489999999888764 3457754442 222332 24444444444433332
Q ss_pred -CceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 321 -VEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 321 -~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
+++|.+|+= -|........|++.|+.-|+..
T Consensus 245 ~~vpLVlHGg--SG~p~e~i~~ai~~GV~KiNi~ 276 (349)
T 3elf_A 245 KPFDFVFHGG--SGSLKSEIEEALRYGVVKMNVD 276 (349)
T ss_dssp CCCCEEECCC--TTCCHHHHHHHHHTTEEEEEEC
T ss_pred CCCcEEEeCC--CCCCHHHHHHHHHcCCEEEEcc
Confidence 478887775 4888999999999999888754
No 96
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=95.12 E-value=1.2 Score=43.64 Aligned_cols=162 Identities=15% Similarity=0.106 Sum_probs=100.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC-ChHhHHHHHHcCCCEEEEecC
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP-NLKGFEAAIAAGAKEVAIFAS 223 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~-n~~gie~a~~aGv~~V~i~~s 223 (359)
.+.+.-++-+++|.++|.+.|.++.+. ..++ +.+..+++.-++.+++=+- |.+-+..|+++|++.+++-.
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp~-------~~~a-~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRINP- 113 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVPH-------KEDV-EALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRINP- 113 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECCS-------HHHH-HHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEECH-
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCCC-------hHHH-HHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEECC-
Confidence 677888889999999999999999732 2233 3345555544555555442 66777788999999998822
Q ss_pred CchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC------CCCCHHHH----HHHHHHHHHCCcCE
Q 018252 224 ASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE------GAIPPSKV----AYVAKELHDMGCFE 293 (359)
Q Consensus 224 ~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~------~r~~~e~l----~~~a~~l~~~Gad~ 293 (359)
-|+|. -++++++++.|+++|+.+|.-+- +|.-+. +..+|+-+ .+.++.+.+.|.+.
T Consensus 114 -------GNig~-----~~~~~~vv~~ak~~~~piRIGvN--~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~ 179 (366)
T 3noy_A 114 -------GNIGK-----EEIVREIVEEAKRRGVAVRIGVN--SGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTN 179 (366)
T ss_dssp -------HHHSC-----HHHHHHHHHHHHHHTCEEEEEEE--GGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred -------cccCc-----hhHHHHHHHHHHHcCCCEEEecC--CcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCe
Confidence 25653 24678899999999999987664 553211 12345443 34556677888864
Q ss_pred --EEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH
Q 018252 294 --ISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 335 (359)
Q Consensus 294 --I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA 335 (359)
|+++-+ .+..+.+-.+.+.+.. +.||++-.-+- |.+
T Consensus 180 iviS~K~S----~v~~~i~ayr~la~~~-dyPLHlGvTEA-G~~ 217 (366)
T 3noy_A 180 YKVSIKGS----DVLQNVRANLIFAERT-DVPLHIGITEA-GMG 217 (366)
T ss_dssp EEEEEECS----SHHHHHHHHHHHHHHC-CCCEEECCSSC-CSH
T ss_pred EEEeeecC----ChHHHHHHHHHHHhcc-CCCEEEccCCC-CCC
Confidence 444443 3333333333344443 35664443332 544
No 97
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.03 E-value=0.77 Score=41.12 Aligned_cols=158 Identities=8% Similarity=-0.018 Sum_probs=93.3
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe------------CChHhHHHHHHcCCC
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT------------PNLKGFEAAIAAGAK 216 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~------------~n~~gie~a~~aGv~ 216 (359)
+..++++.+.+.|++.|++.. | +..+.+++..+..+..+. +..+.++.++++|++
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~~---~----------~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad 103 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRANS---V----------RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIA 103 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEES---H----------HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCS
T ss_pred hHHHHHHHHHHCCCcEeecCC---H----------HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCC
Confidence 678999999999999999863 1 224555544444443221 234678999999999
Q ss_pred EEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhC--CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEE
Q 018252 217 EVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL--SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEI 294 (359)
Q Consensus 217 ~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~--G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I 294 (359)
.|.+-.....-. .+.. +.++++.+++. +..+.. + ..+++. ++.+.++|+|.|
T Consensus 104 ~V~l~~~~~~~~----~~~~-------~~~~i~~i~~~~~~~~v~~------~-----~~t~~e----a~~a~~~Gad~i 157 (234)
T 1yxy_A 104 VIAMDCTKRDRH----DGLD-------IASFIRQVKEKYPNQLLMA------D-----ISTFDE----GLVAHQAGIDFV 157 (234)
T ss_dssp EEEEECCSSCCT----TCCC-------HHHHHHHHHHHCTTCEEEE------E-----CSSHHH----HHHHHHTTCSEE
T ss_pred EEEEcccccCCC----CCcc-------HHHHHHHHHHhCCCCeEEE------e-----CCCHHH----HHHHHHcCCCEE
Confidence 987754321100 0111 13455566665 555422 1 124443 677888999998
Q ss_pred E--EcCCC-CC--CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEEec
Q 018252 295 S--LGDTI-GV--GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHAKP 352 (359)
Q Consensus 295 ~--L~DT~-G~--~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~ID~ 352 (359)
. +.... |. ..+.. .++++.+++. ++++..= =|.. ..|+...+++||+.|=+
T Consensus 158 ~~~v~g~~~~~~~~~~~~-~~~i~~~~~~--~ipvia~----GGI~s~~~~~~~~~~Gad~v~v 214 (234)
T 1yxy_A 158 GTTLSGYTPYSRQEAGPD-VALIEALCKA--GIAVIAE----GKIHSPEEAKKINDLGVAGIVV 214 (234)
T ss_dssp ECTTTTSSTTSCCSSSCC-HHHHHHHHHT--TCCEEEE----SCCCSHHHHHHHHTTCCSEEEE
T ss_pred eeeccccCCCCcCCCCCC-HHHHHHHHhC--CCCEEEE----CCCCCHHHHHHHHHCCCCEEEE
Confidence 2 22110 11 11222 2556666664 3555543 3776 78999999999998743
No 98
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.02 E-value=1.7 Score=38.32 Aligned_cols=162 Identities=10% Similarity=0.047 Sum_probs=98.2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEE------------eCChHhHHHHHHc
Q 018252 146 PTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL------------TPNLKGFEAAIAA 213 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l------------~~n~~gie~a~~a 213 (359)
..+.-.++++.+.++|.+.|++.. + +.++.+++..+..+... .++.+.++.++++
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~~~---~----------~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~ 87 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRANT---K----------EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIES 87 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEES---H----------HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHCCCeeeccCC---H----------HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhC
Confidence 457889999999999999998753 1 22344444334434321 1345688999999
Q ss_pred CCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhC--CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCc
Q 018252 214 GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL--SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGC 291 (359)
Q Consensus 214 Gv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~--G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Ga 291 (359)
|++.|.+....-. +...+ +.++++.++++ |..+.. + ..++++ ++++.++|+
T Consensus 88 Gad~v~l~~~~~~-----~p~~~-------~~~~i~~~~~~~~~~~v~~------~-----~~t~~e----~~~~~~~G~ 140 (223)
T 1y0e_A 88 QCEVIALDATLQQ-----RPKET-------LDELVSYIRTHAPNVEIMA------D-----IATVEE----AKNAARLGF 140 (223)
T ss_dssp TCSEEEEECSCSC-----CSSSC-------HHHHHHHHHHHCTTSEEEE------E-----CSSHHH----HHHHHHTTC
T ss_pred CCCEEEEeeeccc-----CcccC-------HHHHHHHHHHhCCCceEEe------c-----CCCHHH----HHHHHHcCC
Confidence 9999887543210 00011 23556666776 766521 1 235544 345788999
Q ss_pred CEEEEcCC------CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc-HHHHHHHHHHcCCCEEec
Q 018252 292 FEISLGDT------IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQVSPMHAKP 352 (359)
Q Consensus 292 d~I~L~DT------~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL-AlANalaAv~AGa~~ID~ 352 (359)
|.|.+.-. .+..+...-.++++.+++.+. +++.. +=|. ...|+..++++||+.|=.
T Consensus 141 d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~-ipvia----~GGI~~~~~~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 141 DYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVD-AKVIA----EGNVITPDMYKRVMDLGVHCSVV 203 (223)
T ss_dssp SEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCC-SEEEE----ESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCC-CCEEE----ecCCCCHHHHHHHHHcCCCEEEE
Confidence 98875321 111101222456777777663 45554 3366 678999999999998754
No 99
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=95.01 E-value=0.84 Score=43.74 Aligned_cols=200 Identities=18% Similarity=0.171 Sum_probs=107.3
Q ss_pred EEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEec-cCCCCCcCCCCCHHH---HHHHh---hhcCCCeE
Q 018252 128 KIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATS-FVSPKWVPQLADARD---VMEAV---RDLEGARL 197 (359)
Q Consensus 128 ~I~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~-fvspk~vPq~~D~~e---v~~~l---~~~~~~~l 197 (359)
=|+.+|+ =|| |..++.+.-++.++.+.+.|.++|+||. ...|.+.| ....+| +...+ +...++.+
T Consensus 14 GIlNvTPDSFsdg----g~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~-v~~~eE~~Rv~pvI~~l~~~~~vpi 88 (314)
T 2vef_A 14 GIINVTPDSFSDG----GQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSY-VEIEEEIQRVVPVIKAIRKESDVLI 88 (314)
T ss_dssp EEEECCC-------------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CH-HHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EEEeCCCCCCCCC----CCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCC-CCHHHHHHHHHHHHHHHHhhCCceE
Confidence 3555554 455 4446889999999999999999999997 23342111 111233 23332 22336666
Q ss_pred EEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee--cCCCCC---
Q 018252 198 PVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV--GCPVEG--- 272 (359)
Q Consensus 198 ~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~f--g~~~~~--- 272 (359)
+.=+.+.+-++.|+++|++.|+=.-.. ... + .+++.++++|..+. +++.- |.|...
T Consensus 89 SIDT~~~~Va~aAl~aGa~iINDVsg~---------~~d-~-------~m~~v~a~~~~~vv--lmh~~~~g~p~~~~~~ 149 (314)
T 2vef_A 89 SIDTWKSQVAEAALAAGADLVNDITGL---------MGD-E-------KMPHVVAEARAQVV--IMFNPVMARPQHPSSL 149 (314)
T ss_dssp EEECSCHHHHHHHHHTTCCEEEETTTT---------CSC-T-------THHHHHHHHTCEEE--EECCHHHHCTTSTTTT
T ss_pred EEeCCCHHHHHHHHHcCCCEEEECCCC---------CCC-h-------HHHHHHHHcCCCEE--EEecCCCCCCCCcccc
Confidence 666667788999999999887642210 000 1 23444567787653 23211 112110
Q ss_pred --------C--------------C-C--HHHHHHHHHHHHHCCcC--EEEEcCC-CCCC-cHHHHHHHHHHHHHhC-CCc
Q 018252 273 --------A--------------I-P--PSKVAYVAKELHDMGCF--EISLGDT-IGVG-TPGTVVPMLEAVMAVV-PVE 322 (359)
Q Consensus 273 --------r--------------~-~--~e~l~~~a~~l~~~Gad--~I~L~DT-~G~~-~P~~v~~lv~~l~~~~-p~~ 322 (359)
. . + .+++.+.++.+.++|+. .|.| |. +|.+ +.++-.++++.+++.. ++.
T Consensus 150 ~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~Iil-DPGiGF~kt~~~nl~ll~~l~~l~~~g~ 228 (314)
T 2vef_A 150 IFPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILL-DPGIGFGLTKKENLLLLRDLDKLHQKGY 228 (314)
T ss_dssp TSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEE-ECCTTSSCCHHHHHHHHHTHHHHHTTSS
T ss_pred cccccccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEE-eCCCCcccchHHHHHHHHHHHHhhcCCC
Confidence 0 0 0 13355566777889984 4654 54 4433 3556667777766532 344
Q ss_pred eEEEEeCCC------C---Cc---------------H-HHHHHHHHHcCCCEEec
Q 018252 323 KLAVHLHDT------Y---GQ---------------S-LPNILISLQVSPMHAKP 352 (359)
Q Consensus 323 ~L~~H~HNd------~---GL---------------A-lANalaAv~AGa~~ID~ 352 (359)
|+-+=.-|- + |+ + +|-+..|++.||++|.+
T Consensus 229 PvL~G~SrKsfig~~~~~~g~~~~p~tel~~~~R~~~t~a~~~~a~~~Ga~IvRv 283 (314)
T 2vef_A 229 PIFLGVSRKRFVINILEENGFEVNPETELGFRNRDTASAHVTSIAARQGVEVVRV 283 (314)
T ss_dssp CBEEECSSCHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEeCccHHHhhhhccccccCCcccccchhhhhHHHHHHHHHHHHcCCcEEEe
Confidence 544422220 0 21 2 45566788999998865
No 100
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=94.99 E-value=0.31 Score=47.67 Aligned_cols=206 Identities=17% Similarity=0.124 Sum_probs=123.7
Q ss_pred ccCCCCC--CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCc--CCCCCHH--------HHHHHhhhcCCCeEEEEeCC
Q 018252 136 DGLQNEK--NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWV--PQLADAR--------DVMEAVRDLEGARLPVLTPN 203 (359)
Q Consensus 136 DG~Q~~~--~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~v--Pq~~D~~--------ev~~~l~~~~~~~l~~l~~n 203 (359)
.+.+..+ +....+....++++-.+++-+.|=-.+...-++. ..+.... .....+.+..++.+......
T Consensus 29 ~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~ga~~~a~~v~~~A~~~~VPVaLHlDH 108 (357)
T 3qm3_A 29 AEGFAIPAVNVVGTDSINAVLEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILHTDH 108 (357)
T ss_dssp HHTCCEEEEECCSHHHHHHHHHHHHHHTSCEEEEECHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccCccchhhHHHHHHHHHHHHHHHHHHCCCcEEEECCC
Confidence 3445543 4467889999999999999998733221000000 0111111 01112222234556555542
Q ss_pred -----hHhHHHHHH-----------cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeec
Q 018252 204 -----LKGFEAAIA-----------AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG 267 (359)
Q Consensus 204 -----~~gie~a~~-----------aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg 267 (359)
...++.+++ +|...|.+=.| . .+.+|+++..++++++|+..|+.|.+.|-..=|
T Consensus 109 g~~~~~~~i~~~i~a~~~~~~~~~~~GFtSVMiDgS--~--------lp~eENI~~Tk~vv~~ah~~gvsVEaELG~igG 178 (357)
T 3qm3_A 109 AARKLLPWIDGLIEANAQYKKTHGQALFSSHMLDLS--E--------ESLEENLSTCEVYLQKLDALGVALEIELGCTGG 178 (357)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEECCCT--T--------SCHHHHHHHHHHHHHHHHHHTCEEEEECCCCCC
T ss_pred CCccchHHHHHHHHHhHHHHhhhcCCCCCEEEEeCC--C--------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeecc
Confidence 123455554 46777766333 2 256889999999999999999999988775434
Q ss_pred CCCC----------CCCCHHHHHHHHHHHHHC-CcCEEEE--cCCCCCC-------cHHHHHHHHHHHHHhC--C---Cc
Q 018252 268 CPVE----------GAIPPSKVAYVAKELHDM-GCFEISL--GDTIGVG-------TPGTVVPMLEAVMAVV--P---VE 322 (359)
Q Consensus 268 ~~~~----------~r~~~e~l~~~a~~l~~~-Gad~I~L--~DT~G~~-------~P~~v~~lv~~l~~~~--p---~~ 322 (359)
.++. -.++|++..+++++.-.. |+|.+.+ .-.=|.- .|+.+.++-+.+++.+ | .+
T Consensus 179 ~Edgv~~~~~~~~~~yT~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~v 258 (357)
T 3qm3_A 179 EEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPI 258 (357)
T ss_dssp -----CCSSTTCTTTSCCHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHHHTTCSCSCCS
T ss_pred ccCCccccccccccccCCHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCC
Confidence 4332 138999999999876432 4554333 2222222 3555666666666654 2 36
Q ss_pred eEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 323 KLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 323 ~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
+|.+|+=. |........|++.|+.-|+..
T Consensus 259 pLVlHGgS--G~p~e~i~~ai~~GV~KiNi~ 287 (357)
T 3qm3_A 259 NFVFHGGS--GSELKDIKNAVSYGVIKMNID 287 (357)
T ss_dssp CEEECSCT--TCCHHHHHHHHHTTEEEEEEC
T ss_pred cEEEeCCC--CCCHHHHHHHHHCCceEEEec
Confidence 88887754 888999999999999888753
No 101
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=94.98 E-value=0.86 Score=40.84 Aligned_cols=162 Identities=14% Similarity=0.089 Sum_probs=87.9
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCC-CcCCCCCHHHHHHHhhhcCCCeEEEEe---C-C---h-------HhHHHHHHcCC
Q 018252 151 VELIRRLVSSGLPVVEATSFVSPK-WVPQLADARDVMEAVRDLEGARLPVLT---P-N---L-------KGFEAAIAAGA 215 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~fvspk-~vPq~~D~~ev~~~l~~~~~~~l~~l~---~-n---~-------~gie~a~~aGv 215 (359)
.+.++.+.++|++.||+.... +. ......+.+++.+.+++ .++++.++. + + . +-++.|.+.|+
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~~~~~~~~~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~ 99 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDM-PSGSVTDDLNYNQVRNLAEK-YGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGA 99 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTS-TTSSTTTTCCHHHHHHHHHH-TTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEeeccc-cccccccccCHHHHHHHHHH-cCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCC
Confidence 345566778999999998521 11 00012456666665554 355554432 1 1 1 23455666799
Q ss_pred CEEEEecCCchHHHHhhhcCCHHHH-HHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEE
Q 018252 216 KEVAIFASASEAFSKSNINCSIEDS-LVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEI 294 (359)
Q Consensus 216 ~~V~i~~s~S~~~~~~n~~~t~~e~-l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I 294 (359)
+.|.+...... ....+.. .+.++++.++|+++|+++. +... ..+...-.+++.+.++++.+- -. -.+
T Consensus 100 ~~v~~~~g~~~-------~~~~~~~~~~~l~~l~~~a~~~gv~l~--~E~~-~~~~~~~~~~~~~~~l~~~v~-~~-~g~ 167 (272)
T 2q02_A 100 RALVLCPLNDG-------TIVPPEVTVEAIKRLSDLFARYDIQGL--VEPL-GFRVSSLRSAVWAQQLIREAG-SP-FKV 167 (272)
T ss_dssp SEEEECCCCSS-------BCCCHHHHHHHHHHHHHHHHTTTCEEE--ECCC-CSTTCSCCCHHHHHHHHHHHT-CC-CEE
T ss_pred CEEEEccCCCc-------hhHHHHHHHHHHHHHHHHHHHcCCEEE--EEec-CCCcccccCHHHHHHHHHHhC-cC-eEE
Confidence 99887533211 0334566 7888999999999998753 3211 111112347788888777653 11 123
Q ss_pred EEcCCCCCCc--HHHHHHHHHHHHHhCCCceEEEEeCCC
Q 018252 295 SLGDTIGVGT--PGTVVPMLEAVMAVVPVEKLAVHLHDT 331 (359)
Q Consensus 295 ~L~DT~G~~~--P~~v~~lv~~l~~~~p~~~L~~H~HNd 331 (359)
+ -||.=... -.. .++++.+. .+-...+|.||.
T Consensus 168 ~-~D~~h~~~~~~~~-~~~~~~l~---~~~i~~vH~~D~ 201 (272)
T 2q02_A 168 L-LDTFHHHLYEEAE-KEFASRID---ISAIGLVHLSGV 201 (272)
T ss_dssp E-EEHHHHHHCTTHH-HHHHHHCC---GGGEEEEEECBC
T ss_pred E-EEchHhhccCCCc-hhhhhhCC---HhHEEEEEeCCC
Confidence 3 35532211 011 13444332 234678899884
No 102
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.95 E-value=0.23 Score=47.44 Aligned_cols=195 Identities=11% Similarity=0.079 Sum_probs=109.5
Q ss_pred EEeCC----CcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHH---hhh---cCCCeEE
Q 018252 129 IVEVG----PRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEA---VRD---LEGARLP 198 (359)
Q Consensus 129 I~D~T----LRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~---l~~---~~~~~l~ 198 (359)
.+.+| ++||.+. .+.+.-++.++.+.+.|.++|+||....+ ....+++.+. ++. ..++.++
T Consensus 18 riNvTg~~sf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIg~g~~~-----v~~~eem~rvv~~i~~~~~~~~vpis 88 (300)
T 3k13_A 18 RCNVAGSRKFLRLVNE----KKYDEALSIARQQVEDGALVIDVNMDDGL-----LDARTEMTTFLNLIMSEPEIARVPVM 88 (300)
T ss_dssp EEETTTCHHHHHHHHT----TCHHHHHHHHHHHHHTTCSEEEEECCCTT-----SCHHHHHHHHHHHHHTCHHHHTSCEE
T ss_pred eccCCCCHHHHHHHhc----CCHHHHHHHHHHHHHCCCCEEEECCCCCC-----CCHHHHHHHHHHHHHHhhhcCCCeEE
Confidence 34677 6677554 56799999999999999999999974322 1222333333 332 2356666
Q ss_pred EEeCChHhHHHHHH--cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH
Q 018252 199 VLTPNLKGFEAAIA--AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 276 (359)
Q Consensus 199 ~l~~n~~gie~a~~--aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~ 276 (359)
.=+.+.+-++.+++ +|.+.|+=.-. ...++ ++.+++..++++|..+.+ + .+. +.+...+.
T Consensus 89 IDT~~~~V~eaaL~~~~Ga~iINdIs~-----------~~~d~---~~~~~~~l~a~~ga~vV~--m-h~d-~~G~p~t~ 150 (300)
T 3k13_A 89 IDSSKWEVIEAGLKCLQGKSIVNSISL-----------KEGEE---VFLEHARIIKQYGAATVV--M-AFD-EKGQADTA 150 (300)
T ss_dssp EECSCHHHHHHHHHHCSSCCEEEEECS-----------TTCHH---HHHHHHHHHHHHTCEEEE--E-SEE-TTEECCSH
T ss_pred EeCCCHHHHHHHHHhcCCCCEEEeCCc-----------ccCCh---hHHHHHHHHHHhCCeEEE--E-eeC-CCCCCCCH
Confidence 66667788999999 79876653211 00111 233556677788886632 2 231 11112344
Q ss_pred HHHHHHH----HHH-HHCCc--CEEEEcCC---CCCCcHH------HHHHHHHHHHHhCCCceEEEEeCC-CCCcH----
Q 018252 277 SKVAYVA----KEL-HDMGC--FEISLGDT---IGVGTPG------TVVPMLEAVMAVVPVEKLAVHLHD-TYGQS---- 335 (359)
Q Consensus 277 e~l~~~a----~~l-~~~Ga--d~I~L~DT---~G~~~P~------~v~~lv~~l~~~~p~~~L~~H~HN-d~GLA---- 335 (359)
+.-.+++ +.+ .++|+ +.|.|==- +|....+ ++-+-++.+++.+|+.++-+=..| .+|+-
T Consensus 151 ~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~gk~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~SnkSfglp~~~~ 230 (300)
T 3k13_A 151 ARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSFRGNNY 230 (300)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGGGGGTTCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccCCChHHhhHHHHHHHHHHHHHHHhCCCCCEEEEECcccccCCCCcc
Confidence 4433444 333 67898 34554222 3333222 244445555667877666553333 23441
Q ss_pred ------HHHHHHHHHcCCCEE
Q 018252 336 ------LPNILISLQVSPMHA 350 (359)
Q Consensus 336 ------lANalaAv~AGa~~I 350 (359)
-+-...|+++|.+..
T Consensus 231 ~R~~~n~~fl~~ai~~Gld~~ 251 (300)
T 3k13_A 231 IREAMHAVFLYHAIQQGMDMG 251 (300)
T ss_dssp HHHHHHHHHHHHHHHTTCCEE
T ss_pred hhHHHHHHHHHHHHHcCCCEE
Confidence 223567889998753
No 103
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=94.93 E-value=0.28 Score=46.55 Aligned_cols=180 Identities=13% Similarity=0.068 Sum_probs=107.1
Q ss_pred CHHHHHHHHHHHHhCC----CCEEEEeccCC-CCCcC----CCCCHHHHHHHhh---hcCCCeEEEEeCChHhHHHHHHc
Q 018252 146 PTGVKVELIRRLVSSG----LPVVEATSFVS-PKWVP----QLADARDVMEAVR---DLEGARLPVLTPNLKGFEAAIAA 213 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aG----v~~IEvG~fvs-pk~vP----q~~D~~ev~~~l~---~~~~~~l~~l~~n~~gie~a~~a 213 (359)
+.++.+++++.|.++| +..|=-++|-- |+.-| .+. -++=++.++ +-.+..+..=.-+...++.+.+.
T Consensus 32 ~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g-~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~ 110 (285)
T 3sz8_A 32 SLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVG-LDEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEI 110 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSC-HHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcC-HHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh
Confidence 6889999999999864 66554444431 33222 222 122223333 23455544433466778877666
Q ss_pred CCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHHCCcC
Q 018252 214 GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 214 Gv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r-~~~e~l~~~a~~l~~~Gad 292 (359)
++.+.+-. +.-.|+ ++++++...|.+|. +.. +. .+++++...++.+.+.|.+
T Consensus 111 -vd~lqIgA-----~~~~n~------------~LLr~va~~gkPVi------lK~---G~~~t~~ei~~ave~i~~~Gn~ 163 (285)
T 3sz8_A 111 -ADVLQVPA-----FLARQT------------DLVVAIAKAGKPVN------VKK---PQFMSPTQLKHVVSKCGEVGND 163 (285)
T ss_dssp -CSEEEECG-----GGTTCH------------HHHHHHHHTSSCEE------EEC---CTTSCGGGTHHHHHHHHHTTCC
T ss_pred -CCEEEECc-----cccCCH------------HHHHHHHccCCcEE------EeC---CCCCCHHHHHHHHHHHHHcCCC
Confidence 78777742 111111 24444556788873 222 23 4788888999999999998
Q ss_pred EEEEcCCCCCC-cHHHH--HHHHHHHHHhCCCceEEE-EeCCC----------CC---cHHHHHHHHHHcCCC--EEece
Q 018252 293 EISLGDTIGVG-TPGTV--VPMLEAVMAVVPVEKLAV-HLHDT----------YG---QSLPNILISLQVSPM--HAKPC 353 (359)
Q Consensus 293 ~I~L~DT~G~~-~P~~v--~~lv~~l~~~~p~~~L~~-H~HNd----------~G---LAlANalaAv~AGa~--~ID~t 353 (359)
.|.|+.-.-.. .+..+ -.-+..+++.+++.++++ ..|-- -| +-..-++||+.+||+ .|+.=
T Consensus 164 ~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H 243 (285)
T 3sz8_A 164 RVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAH 243 (285)
T ss_dssp CEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC---------------HHHHHHHHHHHCCSEEEEEEE
T ss_pred cEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEec
Confidence 88887643321 12210 223556788887678988 66642 12 226778999999999 77653
No 104
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=94.93 E-value=1.3 Score=41.48 Aligned_cols=164 Identities=12% Similarity=0.055 Sum_probs=95.3
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEE--EEeCChHhHHHHHHcCCCEEEEecCCch
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLP--VLTPNLKGFEAAIAAGAKEVAIFASASE 226 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~--~l~~n~~gie~a~~aGv~~V~i~~s~S~ 226 (359)
+-.++++...+.|...|.+--- +++ +....+.++.+++..+..+. -++.+...++.|.++|++.|.+..+.-+
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd--~~~---f~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~ 147 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTE--QRR---FQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALE 147 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECC--GGG---HHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSC
T ss_pred CHHHHHHHHHHcCCCEEEEecC--hhh---cCCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEecccCC
Confidence 5578899999999999988420 100 01112233444432222221 1233556799999999999998654211
Q ss_pred HHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHH
Q 018252 227 AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPG 306 (359)
Q Consensus 227 ~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~ 306 (359)
.+.+.++++.++++|+.+.+.+ ++++++ +.+.++|++.|.+--......+.
T Consensus 148 --------------~~~l~~l~~~a~~lGl~~lvev-----------~t~ee~----~~A~~~Gad~IGv~~r~l~~~~~ 198 (272)
T 3qja_A 148 --------------QSVLVSMLDRTESLGMTALVEV-----------HTEQEA----DRALKAGAKVIGVNARDLMTLDV 198 (272)
T ss_dssp --------------HHHHHHHHHHHHHTTCEEEEEE-----------SSHHHH----HHHHHHTCSEEEEESBCTTTCCB
T ss_pred --------------HHHHHHHHHHHHHCCCcEEEEc-----------CCHHHH----HHHHHCCCCEEEECCCccccccc
Confidence 1235677888899999874322 355554 33446799998886322211111
Q ss_pred HHHHHHHHHHHhCC-CceEEEEeCCCCCcH-HHHHHHHHHcCCCEEe
Q 018252 307 TVVPMLEAVMAVVP-VEKLAVHLHDTYGQS-LPNILISLQVSPMHAK 351 (359)
Q Consensus 307 ~v~~lv~~l~~~~p-~~~L~~H~HNd~GLA-lANalaAv~AGa~~ID 351 (359)
.+ +.+..+.+.+| ++++-.= -|.. ..++....++||+.|=
T Consensus 199 dl-~~~~~l~~~v~~~~pvVae----gGI~t~edv~~l~~~Gadgvl 240 (272)
T 3qja_A 199 DR-DCFARIAPGLPSSVIRIAE----SGVRGTADLLAYAGAGADAVL 240 (272)
T ss_dssp CT-THHHHHGGGSCTTSEEEEE----SCCCSHHHHHHHHHTTCSEEE
T ss_pred CH-HHHHHHHHhCcccCEEEEE----CCCCCHHHHHHHHHcCCCEEE
Confidence 22 22344555555 3444432 2444 5788888999998763
No 105
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=94.91 E-value=1.3 Score=41.10 Aligned_cols=176 Identities=11% Similarity=0.084 Sum_probs=111.3
Q ss_pred CCCCccEEEeCCCcccCCCCCC---CCCHHHHHHHHHHHHhCCCCEEEEec--cCCCCCcCCCCCHHHHHHHhh---h-c
Q 018252 122 GIPRFVKIVEVGPRDGLQNEKN---TVPTGVKVELIRRLVSSGLPVVEATS--FVSPKWVPQLADARDVMEAVR---D-L 192 (359)
Q Consensus 122 ~~p~~V~I~D~TLRDG~Q~~~~---~~~~~~k~~ia~~L~~aGv~~IEvG~--fvspk~vPq~~D~~ev~~~l~---~-~ 192 (359)
.|.+.|+|-++++=+|.--.-. .-+.++.++-++.+...|.|.||+=. +.. ..+.+++.+.+. . .
T Consensus 3 ~m~~~v~v~~~~ig~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~------~~~~~~v~~~l~~lr~~~ 76 (258)
T 4h3d_A 3 AMKRKVQVKNITIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFEN------VENIKEVKEVLYELRSYI 76 (258)
T ss_dssp -CCCCEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTT------TTCHHHHHHHHHHHHHHC
T ss_pred CCcceEEEcCEEeCCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccc------cCCHHHHHHHHHHHHHhc
Confidence 3678889999988888543322 23567777888888899999999975 322 234454444443 3 3
Q ss_pred CCCeEEEEeCCh-Hh-------------HHHHHHcC-CCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCc
Q 018252 193 EGARLPVLTPNL-KG-------------FEAAIAAG-AKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP 257 (359)
Q Consensus 193 ~~~~l~~l~~n~-~g-------------ie~a~~aG-v~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~ 257 (359)
.+..+..-+|.. +| ++.+++.| ++.|.+-....+ +.+.++++.+++.|.+
T Consensus 77 ~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~---------------~~~~~l~~~a~~~~~k 141 (258)
T 4h3d_A 77 HDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGD---------------EVIDEVVNFAHKKEVK 141 (258)
T ss_dssp TTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGGCH---------------HHHHHHHHHHHHTTCE
T ss_pred CCCCEEEEEechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhccH---------------HHHHHHHHHHHhCCCE
Confidence 456666666632 11 34555666 788888654322 1234677888888888
Q ss_pred EEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHH---hCCCceEE
Q 018252 258 VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMA---VVPVEKLA 325 (359)
Q Consensus 258 V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~---~~p~~~L~ 325 (359)
+.+.. +.| .+.-+.+.+.+..+++.+.|+|.+-|+=+. -++.++.+++.+..+ ..++.|+-
T Consensus 142 iI~S~-Hdf----~~TP~~~el~~~~~~~~~~gaDIvKia~~~--~~~~D~l~Ll~~~~~~~~~~~~~P~I 205 (258)
T 4h3d_A 142 VIISN-HDF----NKTPKKEEIVSRLCRMQELGADLPKIAVMP--QNEKDVLVLLEATNEMFKIYADRPII 205 (258)
T ss_dssp EEEEE-EES----SCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCSSCBE
T ss_pred EEEEE-ecC----CCCCCHHHHHHHHHHHHHhCCCEEEEEEcc--CCHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 74322 222 122345788899999999999999887554 367888887766543 34444443
No 106
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.82 E-value=1.3 Score=42.42 Aligned_cols=146 Identities=13% Similarity=0.110 Sum_probs=93.4
Q ss_pred CeEEEEeC-ChHhHHHHHHcCCCEEEEec-CCchHHHHhhhc-CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC
Q 018252 195 ARLPVLTP-NLKGFEAAIAAGAKEVAIFA-SASEAFSKSNIN-CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE 271 (359)
Q Consensus 195 ~~l~~l~~-n~~gie~a~~aGv~~V~i~~-s~S~~~~~~n~~-~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~ 271 (359)
-.+..++. +.--...+-++|++-|.+.- +.+-.+-.-..+ .|.++.+..++.+.+.+ .+.|.+.+- || +
T Consensus 29 ~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~---~~pviaD~d--~G--y- 100 (305)
T 3ih1_A 29 EILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRAT---DLPVLVDID--TG--F- 100 (305)
T ss_dssp SCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHH---CCCEEEECT--TC--S-
T ss_pred CcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhc---CCCEEEECC--CC--C-
Confidence 33444443 22334445567999888753 333222221222 47888888888777655 456644442 32 1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC-----------CCcHHHHHHHHHHHHHhCCCceEEEEeCC----CCCcHH
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVVPVEKLAVHLHD----TYGQSL 336 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~p~~~L~~H~HN----d~GLAl 336 (359)
-+++.+.+.++.+.++|+..|.|-|..+ +...+++.+.|+++++.-++..|-.-+-. .+--++
T Consensus 101 --g~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai 178 (305)
T 3ih1_A 101 --GGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAI 178 (305)
T ss_dssp --SSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHH
T ss_pred --CCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHH
Confidence 2578899999999999999999999874 34456788888888887443333333322 133578
Q ss_pred HHHHHHHHcCCCEE
Q 018252 337 PNILISLQVSPMHA 350 (359)
Q Consensus 337 ANalaAv~AGa~~I 350 (359)
.-+.+-.+|||+.|
T Consensus 179 ~Ra~ay~eAGAD~i 192 (305)
T 3ih1_A 179 ERANAYVKAGADAI 192 (305)
T ss_dssp HHHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEE
Confidence 88999999999976
No 107
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=94.79 E-value=2.2 Score=40.65 Aligned_cols=164 Identities=12% Similarity=0.039 Sum_probs=103.5
Q ss_pred EEeCCCcccCCCCCCCCCHHHHHHHHHHHH-hCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc----CCCeEEEEe--
Q 018252 129 IVEVGPRDGLQNEKNTVPTGVKVELIRRLV-SSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL----EGARLPVLT-- 201 (359)
Q Consensus 129 I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~-~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~----~~~~l~~l~-- 201 (359)
.+|-|+ .+...+.++..++.+.-. +-++..|-| +|.+|| ...+.++.. .++++.+.+
T Consensus 29 ~IDhTl------L~p~~T~e~I~~lc~eA~~~~~~aaVCV----~P~~V~------~a~~~L~~~~~~~s~v~V~tVigF 92 (297)
T 4eiv_A 29 FFEVAA------LTDGETNESVAAVCKIAAKDPAIVGVSV----RPAFVR------FIRQELVKSAPEVAGIKVCAAVNF 92 (297)
T ss_dssp TEEEEE------CSTTCCHHHHHHHHHHHHSSSCCSEEEE----CGGGHH------HHHHTGGGTCGGGGGSEEEEEEST
T ss_pred hcCccC------CCCCCCHHHHHHHHHHHHhhcCcEEEEE----CHHHHH------HHHHHhcccCcCCCCCeEEEEecC
Confidence 456665 233577888888888777 677666654 343332 233444432 467777666
Q ss_pred CC----h----HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC
Q 018252 202 PN----L----KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 273 (359)
Q Consensus 202 ~n----~----~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r 273 (359)
|. . ...+.|++.|+++|.+.+....... |.....+...+.+..+.+.+. +..+.+-|. - .--
T Consensus 93 P~G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~--~~~g~~~~V~~eI~~v~~a~~--~~~lKVIlE--t----~~L 162 (297)
T 4eiv_A 93 PEGTGTPDTVSLEAVGALKDGADEIECLIDWRRMNE--NVADGESRIRLLVSEVKKVVG--PKTLKVVLS--G----GEL 162 (297)
T ss_dssp TTCCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHH--CHHHHHHHHHHHHHHHHHHHT--TSEEEEECC--S----SCC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhc--ccCCcHHHHHHHHHHHHHHhc--CCceEEEEe--c----ccC
Confidence 41 1 3567899999999999988655432 111124556677777777774 333332222 1 123
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCC--CCCcHHHHHHHHHHHHHh
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTI--GVGTPGTVVPMLEAVMAV 318 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~--G~~~P~~v~~lv~~l~~~ 318 (359)
.+.+.+...++.+.++|+|-|-=.--. |.++|+++.-+.+.+++.
T Consensus 163 t~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~~~ 209 (297)
T 4eiv_A 163 QGGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALREY 209 (297)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 466667889999999999987654433 468999999999988743
No 108
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.61 E-value=2.3 Score=39.77 Aligned_cols=185 Identities=11% Similarity=0.097 Sum_probs=103.3
Q ss_pred HHHHHHHhCCCCEEEEecc-CCCCC---cC---------------CCCCHHHHHHHhhhc---CCCeEEE-Ee-CChHh-
Q 018252 152 ELIRRLVSSGLPVVEATSF-VSPKW---VP---------------QLADARDVMEAVRDL---EGARLPV-LT-PNLKG- 206 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG~f-vspk~---vP---------------q~~D~~ev~~~l~~~---~~~~l~~-l~-~n~~g- 206 (359)
+.++.+.+.|+-.|++++. ..|.. -| +....+.+.+.++.. ++..+.+ +. .+.++
T Consensus 29 ~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~g~~~~~~ 108 (314)
T 2e6f_A 29 EDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSISGLSVEEN 108 (314)
T ss_dssp HHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEECCSSHHHH
T ss_pred HHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeCCCCHHHH
Confidence 4466789999999998762 22100 01 112244444555432 2333322 22 34344
Q ss_pred ---HHHHHHcCCC---EEEEec--CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCHH
Q 018252 207 ---FEAAIAAGAK---EVAIFA--SASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPPS 277 (359)
Q Consensus 207 ---ie~a~~aGv~---~V~i~~--s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~-G~~V~~~is~~fg~~~~~r~~~e 277 (359)
++++.++|+| .|.+-. |..+ ....++.+.+.. .++++..++. ++++.+-+. + -.+.+
T Consensus 109 ~~~a~~~~~~g~d~~~~iein~~~P~~~--g~~~~g~~~~~~----~~ii~~vr~~~~~Pv~vK~~-----~---~~~~~ 174 (314)
T 2e6f_A 109 VAMVRRLAPVAQEKGVLLELNLSCPNVP--GKPQVAYDFEAM----RTYLQQVSLAYGLPFGVKMP-----P---YFDIA 174 (314)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCCCCST--TCCCGGGSHHHH----HHHHHHHHHHHCSCEEEEEC-----C---CCCHH
T ss_pred HHHHHHHHHhCCCcCceEEEEcCCCCCC--CchhhcCCHHHH----HHHHHHHHHhcCCCEEEEEC-----C---CCCHH
Confidence 4455567878 666543 3321 112234444433 3444444433 566644443 1 13678
Q ss_pred HHHHHHHHHHHCC-cCEEEEcCCCC----------------------CCcH---HHHHHHHHHHHHhCCCceEEEEeCCC
Q 018252 278 KVAYVAKELHDMG-CFEISLGDTIG----------------------VGTP---GTVVPMLEAVMAVVPVEKLAVHLHDT 331 (359)
Q Consensus 278 ~l~~~a~~l~~~G-ad~I~L~DT~G----------------------~~~P---~~v~~lv~~l~~~~p~~~L~~H~HNd 331 (359)
.+.++++.+.++| +|-|.+.++.| ...| ....++++.+++.+|+++|-.=+-=.
T Consensus 175 ~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~ 254 (314)
T 2e6f_A 175 HFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVY 254 (314)
T ss_dssp HHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCC
T ss_pred HHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 8999999999999 99999888763 1111 12347788888887666766544222
Q ss_pred CCcHHHHHHHHHHcCCCEEece
Q 018252 332 YGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 332 ~GLAlANalaAv~AGa~~ID~t 353 (359)
. ...+.+++.+||+.|-..
T Consensus 255 ~---~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 255 S---GEDAFLHILAGASMVQVG 273 (314)
T ss_dssp S---HHHHHHHHHHTCSSEEEC
T ss_pred C---HHHHHHHHHcCCCEEEEc
Confidence 1 346777788999987543
No 109
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=94.60 E-value=0.97 Score=43.56 Aligned_cols=140 Identities=19% Similarity=0.114 Sum_probs=87.9
Q ss_pred HHHHHHcCCCEEEEecCC--------chHHH--HhhhcCCHHHHHHHHHHHHHHHHhC-C--CcEEEEEeeeecCCCCCC
Q 018252 207 FEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-S--IPVRGYVSCVVGCPVEGA 273 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~--------S~~~~--~~n~~~t~~e~l~~i~~~i~~Ak~~-G--~~V~~~is~~fg~~~~~r 273 (359)
.++|.++|.|-|.+-.+- |+..+ ...+|-+.++-.+.+.++++.+|+. | ..|.+-|+.... ..+.
T Consensus 158 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~--~~~g 235 (349)
T 3hgj_A 158 ARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDW--GEGG 235 (349)
T ss_dssp HHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCC--STTS
T ss_pred HHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccc--cCCC
Confidence 456777999987775542 12211 1234667777677777888877765 3 446556663221 1234
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcC--CCCC----CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGD--TIGV----GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS- 346 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~D--T~G~----~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG- 346 (359)
.+++...++++.+.++|+|-|.+.. +... ..|....++++.+++.++ ++|..=+-- .....+..+++.|
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~Ggi---~t~e~a~~~l~~G~ 311 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVG-LRTGAVGLI---TTPEQAETLLQAGS 311 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHC-CEEEECSSC---CCHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcC-ceEEEECCC---CCHHHHHHHHHCCC
Confidence 6788899999999999999888864 2111 113334567788888764 455432210 1357788999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
||.|-.
T Consensus 312 aD~V~i 317 (349)
T 3hgj_A 312 ADLVLL 317 (349)
T ss_dssp CSEEEE
T ss_pred ceEEEe
Confidence 888753
No 110
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=94.51 E-value=1.4 Score=41.50 Aligned_cols=179 Identities=13% Similarity=0.031 Sum_probs=110.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccC---CCCCcCCCCCHHHHHHHhhh---cCCCeEEEEeCChHhHHHHHHcCCCEEE
Q 018252 146 PTGVKVELIRRLVSSGLPVVEATSFV---SPKWVPQLADARDVMEAVRD---LEGARLPVLTPNLKGFEAAIAAGAKEVA 219 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aGv~~IEvG~fv---spk~vPq~~D~~ev~~~l~~---~~~~~l~~l~~n~~gie~a~~aGv~~V~ 219 (359)
+.+.-+++++.+.++|.+.+=.+.|- +|...-.+ . ++-++.+++ -.+..+..=.-+...++.+.+. ++.+.
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~-g-~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~~k 126 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGL-G-LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRY-ADMLQ 126 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCC-T-HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHH-CSEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCC-C-HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHh-CCeEE
Confidence 78999999999999999998777653 22111112 1 222333332 2455544433466778877777 78877
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHHCCcCEEEEcC
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAKELHDMGCFEISLGD 298 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r-~~~e~l~~~a~~l~~~Gad~I~L~D 298 (359)
|-.. ...| . ++++++...|.+|. +.. +. .+++++...++.+...|...|.|+-
T Consensus 127 Igs~-----~~~n--------~----~ll~~~a~~~kPV~------lk~---G~~~t~~ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 127 IGAR-----NMQN--------F----PLLREVGRSGKPVL------LKR---GFGNTVEELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp ECGG-----GTTC--------H----HHHHHHHHHTCCEE------EEC---CTTCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ECcc-----cccC--------H----HHHHHHHccCCeEE------EcC---CCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 7432 1111 1 33444446688873 222 34 4899999999999999998777766
Q ss_pred ----CCCCCcHHHHHHH-HHHHHHhCCCceEE-E--EeCCCCCcHHHHHHHHHHcCCC--EEecee
Q 018252 299 ----TIGVGTPGTVVPM-LEAVMAVVPVEKLA-V--HLHDTYGQSLPNILISLQVSPM--HAKPCF 354 (359)
Q Consensus 299 ----T~G~~~P~~v~~l-v~~l~~~~p~~~L~-~--H~HNd~GLAlANalaAv~AGa~--~ID~tl 354 (359)
|.-...++.+.-. +..+++.+. .++. . |.=...-+...-+++|+.+||+ .|+.=+
T Consensus 181 Rg~~~yp~y~~~~vdl~~i~~lk~~~~-lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 181 RGIRTFEPSTRFTLDVAAVAVLKEATH-LPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp CCBCCSCCSSSSBCBHHHHHHHHHHBS-SCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CCcCCCCCcCcchhCHHHHHHHHHHhC-CCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 2212244444444 667777653 4563 3 4422222336778889999999 887643
No 111
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=94.51 E-value=0.63 Score=45.31 Aligned_cols=137 Identities=14% Similarity=0.017 Sum_probs=83.9
Q ss_pred HHHHHcCCCEEEEecCC--------chHHH--HhhhcCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEee-eecCCCCCCC
Q 018252 208 EAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSC-VVGCPVEGAI 274 (359)
Q Consensus 208 e~a~~aGv~~V~i~~s~--------S~~~~--~~n~~~t~~e~l~~i~~~i~~Ak~~-G~-~V~~~is~-~fg~~~~~r~ 274 (359)
++|.++|.|.|.+-..- |+..+ ....|-+.++-.+.+.++++.+|+. |. .|.+-|+. .+.....+..
T Consensus 168 ~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~ 247 (365)
T 2gou_A 168 LNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDAD 247 (365)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSS
T ss_pred HHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCC
Confidence 45677999998886532 22211 1124556665555666666666553 32 55555553 1111011345
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCCC--C-CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-CCEE
Q 018252 275 PPSKVAYVAKELHDMGCFEISLGDTI--G-VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS-PMHA 350 (359)
Q Consensus 275 ~~e~l~~~a~~l~~~Gad~I~L~DT~--G-~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG-a~~I 350 (359)
+.+...++++.+.++|++-|.+.... | ...|. ++++.+++.++. +|-.=+- . ....+..++++| ||.|
T Consensus 248 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~---~~~~~i~~~~~i-Pvi~~Gg--i--~~~~a~~~l~~g~aD~V 319 (365)
T 2gou_A 248 PILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPV---SFKRALREAYQG-VLIYAGR--Y--NAEKAEQAINDGLADMI 319 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH---HHHHHHHHHCCS-EEEEESS--C--CHHHHHHHHHTTSCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccH---HHHHHHHHHCCC-cEEEeCC--C--CHHHHHHHHHCCCccee
Confidence 77889999999999999988886531 1 11232 567888888763 4443222 2 368889999999 9987
Q ss_pred ec
Q 018252 351 KP 352 (359)
Q Consensus 351 D~ 352 (359)
-.
T Consensus 320 ~i 321 (365)
T 2gou_A 320 GF 321 (365)
T ss_dssp EC
T ss_pred hh
Confidence 54
No 112
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=94.50 E-value=1.1 Score=42.83 Aligned_cols=139 Identities=17% Similarity=-0.013 Sum_probs=87.8
Q ss_pred HHHHHHcCCCEEEEecCC--------chHHH--HhhhcCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCC
Q 018252 207 FEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIP 275 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~--------S~~~~--~~n~~~t~~e~l~~i~~~i~~Ak~~-G~~V~~~is~~fg~~~~~r~~ 275 (359)
.+++.++|.|.|.+-..- |+..+ ....|-+.++-.+.+.++++..++. ++.|.+-|+..-. ..+..+
T Consensus 150 A~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~--~~~g~~ 227 (338)
T 1z41_A 150 AARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDY--TDKGLD 227 (338)
T ss_dssp HHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCC--STTSCC
T ss_pred HHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCccc--CCCCCC
Confidence 356677899988775532 12111 1234566666666667777776654 5666666663211 123467
Q ss_pred HHHHHHHHHHHHHCCcCEEEEcCCCC--C---CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc-HHHHHHHHHHcC-CC
Q 018252 276 PSKVAYVAKELHDMGCFEISLGDTIG--V---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQVS-PM 348 (359)
Q Consensus 276 ~e~l~~~a~~l~~~Gad~I~L~DT~G--~---~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL-AlANalaAv~AG-a~ 348 (359)
.+...++++.+.++|++-|.+.+..- . ..|..-.++++.+++.+. ++|..=+ |. ....+..+++.| ||
T Consensus 228 ~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~G----gi~s~~~a~~~l~~G~aD 302 (338)
T 1z41_A 228 IADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQAD-MATGAVG----MITDGSMAEEILQNGRAD 302 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHC-CEEEECS----SCCSHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCC-CCEEEEC----CCCCHHHHHHHHHcCCce
Confidence 88999999999999999999876421 1 123223567788888764 4554422 22 357888999999 99
Q ss_pred EEec
Q 018252 349 HAKP 352 (359)
Q Consensus 349 ~ID~ 352 (359)
.|-.
T Consensus 303 ~V~i 306 (338)
T 1z41_A 303 LIFI 306 (338)
T ss_dssp EEEE
T ss_pred EEee
Confidence 8754
No 113
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=94.50 E-value=0.7 Score=40.80 Aligned_cols=172 Identities=13% Similarity=0.104 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeE--EEEeCCh-HhHHHHHHcCCCEEEEecC
Q 018252 147 TGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARL--PVLTPNL-KGFEAAIAAGAKEVAIFAS 223 (359)
Q Consensus 147 ~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l--~~l~~n~-~gie~a~~aGv~~V~i~~s 223 (359)
.....+.++.+.++|++.+++.....+ ..+......++.+.+++..+..+ -..+.+. +.++.+.++|++.|.+...
T Consensus 15 ~~~~~~~~~~~~~~G~~~i~~~~~dg~-~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~ 93 (220)
T 2fli_A 15 YANFASELARIEETDAEYVHIDIMDGQ-FVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTE 93 (220)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEEEBSS-SSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeecCC-CCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccC
Confidence 356677888999999999888752211 01222221334455554434333 3334554 4689999999999988654
Q ss_pred CchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCC--
Q 018252 224 ASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIG-- 301 (359)
Q Consensus 224 ~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G-- 301 (359)
..+ ....+++.+++.|.++...+. + .++.+.+ +.+ ..++|.|.+ |+++
T Consensus 94 ~~~----------------~~~~~~~~~~~~g~~i~~~~~-----~---~t~~e~~----~~~-~~~~d~vl~-~~~~~g 143 (220)
T 2fli_A 94 STR----------------HIHGALQKIKAAGMKAGVVIN-----P---GTPATAL----EPL-LDLVDQVLI-MTVNPG 143 (220)
T ss_dssp GCS----------------CHHHHHHHHHHTTSEEEEEEC-----T---TSCGGGG----GGG-TTTCSEEEE-ESSCTT
T ss_pred ccc----------------cHHHHHHHHHHcCCcEEEEEc-----C---CCCHHHH----HHH-HhhCCEEEE-EEECCC
Confidence 221 122445566677877543321 1 1232222 222 245786643 4432
Q ss_pred ---CCcHHHHHHHHHHHHHhCC----CceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 302 ---VGTPGTVVPMLEAVMAVVP----VEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 302 ---~~~P~~v~~lv~~l~~~~p----~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
...+....+.++.+++..+ +.++.+ +-|....|+-.++++|++.|.+.
T Consensus 144 ~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v----~GGI~~~~~~~~~~~Gad~vvvG 198 (220)
T 2fli_A 144 FGGQAFIPECLEKVATVAKWRDEKGLSFDIEV----DGGVDNKTIRACYEAGANVFVAG 198 (220)
T ss_dssp CSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEE----ESSCCTTTHHHHHHHTCCEEEES
T ss_pred CcccccCHHHHHHHHHHHHHHHhcCCCceEEE----ECcCCHHHHHHHHHcCCCEEEEC
Confidence 2222233334455554331 345554 34555578888899999998764
No 114
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=94.50 E-value=0.92 Score=40.91 Aligned_cols=164 Identities=19% Similarity=0.212 Sum_probs=89.4
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCC-CcC-CC--CCHHHHHHHhhhcCCC-eEEEEeC---Ch---------------H
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPK-WVP-QL--ADARDVMEAVRDLEGA-RLPVLTP---NL---------------K 205 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk-~vP-q~--~D~~ev~~~l~~~~~~-~l~~l~~---n~---------------~ 205 (359)
.-.+.++.+.++|++.||+ +...|. +.+ .+ .+.+++.+.+++ .++ .+.+..| |. +
T Consensus 15 ~~~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~ 92 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREA-SGGLPAVIHASYLVNLGAEGELWEKSVASLAD 92 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHH-TTCCCEEEECCTTCCTTCSSTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHH-cCCceEEEecCcccCCCCCHHHHHHHHHHHHH
Confidence 3455667778889999999 333332 111 11 122333333332 344 4444433 11 1
Q ss_pred hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHH-hCCCcEEEEEeeeecCCCCCC--CCHHHHHHH
Q 018252 206 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK-VLSIPVRGYVSCVVGCPVEGA--IPPSKVAYV 282 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak-~~G~~V~~~is~~fg~~~~~r--~~~e~l~~~ 282 (359)
.++.|.+.|++.|.+..... + .+...+.+.+++++|+ +.|+.+ .|....+ ..+. .+++.+.++
T Consensus 93 ~i~~a~~lGa~~vv~h~g~~--------~--~~~~~~~l~~l~~~a~~~~gv~l--~lEn~~~--~~~~~~~~~~~~~~l 158 (270)
T 3aam_A 93 DLEKAALLGVEYVVVHPGSG--------R--PERVKEGALKALRLAGVRSRPVL--LVENTAG--GGEKVGARFEELAWL 158 (270)
T ss_dssp HHHHHHHHTCCEEEECCCBS--------C--HHHHHHHHHHHHHHHTCCSSSEE--EEECCCC--CTTBSCCSHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCCC--------C--HHHHHHHHHHHHHhhcccCCCEE--EEecCCC--CCCccCCCHHHHHHH
Confidence 24455567999887654321 1 1566788888889988 788765 3432211 1122 388888888
Q ss_pred HHHHHHCCcCEEEEcCCC-----CCCcHHHHHHHHHHHHHhCC-CceEEEEeCCCCC
Q 018252 283 AKELHDMGCFEISLGDTI-----GVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYG 333 (359)
Q Consensus 283 a~~l~~~Gad~I~L~DT~-----G~~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~G 333 (359)
++.+ ..| ++ -||. |.-....+.++++.+.+.++ +....+|.||..+
T Consensus 159 ~~~v-~vg---~~-lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~~ 210 (270)
T 3aam_A 159 VADT-PLQ---VC-LDTCHAYAAGYDVAEDPLGVLDALDRAVGLERVPVVHLNDSVG 210 (270)
T ss_dssp HTTS-SCE---EE-EEHHHHHHHTCCTTTCHHHHHHHHHHHTCGGGCCEEECCEESS
T ss_pred HHhC-CEE---EE-EehhhHHhccCCchhhHHHHHHHHHHhcCccceeEEEEecCCC
Confidence 8876 222 22 2543 32111135666776665554 4567899998654
No 115
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=94.41 E-value=0.67 Score=42.31 Aligned_cols=165 Identities=11% Similarity=0.025 Sum_probs=97.4
Q ss_pred HHHHHHHHHHhCCCCEE--EE--eccCCCCCcCCCCCHHHHHHHhhhcC-CCeEEEE--eCChH-hHHHHHHcCCCEEEE
Q 018252 149 VKVELIRRLVSSGLPVV--EA--TSFVSPKWVPQLADARDVMEAVRDLE-GARLPVL--TPNLK-GFEAAIAAGAKEVAI 220 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~I--Ev--G~fvspk~vPq~~D~~ev~~~l~~~~-~~~l~~l--~~n~~-gie~a~~aGv~~V~i 220 (359)
.-.+-++.+.++|++.+ .+ |.|+ |.+.--..+.+.+++.. +..+-+. +-+.. -++...+ ++.+.+
T Consensus 19 ~l~~~i~~~~~~g~d~iHvDvmDg~fv-----pn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~--Ad~itv 91 (227)
T 1tqx_A 19 KLAEETQRMESLGAEWIHLDVMDMHFV-----PNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKT--SNQLTF 91 (227)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSS-----SCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTT--SSEEEE
T ss_pred hHHHHHHHHHHcCCCEEEEEEEeCCcC-----cchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHh--CCEEEE
Confidence 34455677788999975 44 5554 33333235567777653 5555443 33432 3343333 677766
Q ss_pred ecCCchHHHHhhhcCCHHHHHHHHHHHHH---HHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCC-cCEEEE
Q 018252 221 FASASEAFSKSNINCSIEDSLVRYRAVAH---AAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG-CFEISL 296 (359)
Q Consensus 221 ~~s~S~~~~~~n~~~t~~e~l~~i~~~i~---~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~G-ad~I~L 296 (359)
..-+.+.+ +.+.++ .+|++|+++...+ +| .++. +.++.+.++| +|.|.+
T Consensus 92 H~ea~~~~---------------~~~~i~~~~~i~~~G~k~gval-----np---~tp~----~~~~~~l~~g~~D~Vlv 144 (227)
T 1tqx_A 92 HFEALNED---------------TERCIQLAKEIRDNNLWCGISI-----KP---KTDV----QKLVPILDTNLINTVLV 144 (227)
T ss_dssp EGGGGTTC---------------HHHHHHHHHHHHTTTCEEEEEE-----CT---TSCG----GGGHHHHTTTCCSEEEE
T ss_pred eecCCccC---------------HHHHHHHHHHHHHcCCeEEEEe-----CC---CCcH----HHHHHHhhcCCcCEEEE
Confidence 54432211 224555 8899999875544 22 1232 3445566666 887722
Q ss_pred ---cCCC-CCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 297 ---GDTI-GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 297 ---~DT~-G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
-=.+ |-.-+....+.++.+++..++.+|.+ |-|....|+-.++++||+.+=
T Consensus 145 msV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~V----dGGI~~~ti~~~~~aGAd~~V 199 (227)
T 1tqx_A 145 MTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQV----DGGLNIETTEISASHGANIIV 199 (227)
T ss_dssp ESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEE----ESSCCHHHHHHHHHHTCCEEE
T ss_pred eeeccCCCCcccchHHHHHHHHHHHhccCCeEEE----ECCCCHHHHHHHHHcCCCEEE
Confidence 2233 33335566667778888776566665 668888999999999999873
No 116
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=94.30 E-value=0.38 Score=44.91 Aligned_cols=77 Identities=17% Similarity=0.149 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHH-CCcCEEEE--c--------CCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHH
Q 018252 275 PPSKVAYVAKELHD-MGCFEISL--G--------DTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISL 343 (359)
Q Consensus 275 ~~e~l~~~a~~l~~-~Gad~I~L--~--------DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv 343 (359)
+++.+.+.++.+.+ +|+|.|.| . |..| ..|..+.++++++++.+. +++.+..--+..-...-+..+.
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g-~~~~~~~eii~~v~~~~~-~pv~vk~~~~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFG-TDPEVAAALVKACKAVSK-VPLYVKLSPNVTDIVPIAKAVE 186 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGG-GCHHHHHHHHHHHHHHCS-SCEEEEECSCSSCSHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhc-CCHHHHHHHHHHHHHhcC-CCEEEEECCChHHHHHHHHHHH
Confidence 67889999999988 99996655 2 3333 268888999999999874 5777766533332234467788
Q ss_pred HcCCCEEece
Q 018252 344 QVSPMHAKPC 353 (359)
Q Consensus 344 ~AGa~~ID~t 353 (359)
++|++.|+++
T Consensus 187 ~~G~d~i~v~ 196 (311)
T 1ep3_A 187 AAGADGLTMI 196 (311)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEe
Confidence 9999999874
No 117
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=94.25 E-value=2.4 Score=38.94 Aligned_cols=173 Identities=16% Similarity=0.148 Sum_probs=87.8
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCc--CC--CCCHHHHHHHhhhcCCC-eEEEEeC--------C-h-----------
Q 018252 150 KVELIRRLVSSGLPVVEATSFVSPKWV--PQ--LADARDVMEAVRDLEGA-RLPVLTP--------N-L----------- 204 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~fvspk~v--Pq--~~D~~ev~~~l~~~~~~-~l~~l~~--------n-~----------- 204 (359)
-.+.++.+.++|++.||+.. ..|... +. -.+.+++.+.+++. ++ .+.+..+ + .
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~-~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~~~ 97 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYT-GAPQNTKRKSIEELNIEAGRQHMQAH-GIEEIVVHAPYIINIGNTTNLDTFSLGVDFLR 97 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEES-SCTTCCCCCCSGGGCHHHHHHHHHHT-TCCEEEEECCTTCCTTCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcC-CCCCccCCCCCCHHHHHHHHHHHHHc-CCceEEEeccccccCCCCCcHHHHHHHHHHHH
Confidence 34566677889999999942 222211 11 13556666665542 33 3444433 2 1
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
+.++.|.+.|++.|.+.... . .+.+.++.++++.+.++.+.+.-..|+..|....+.+..-..+++.+.++++
T Consensus 98 ~~i~~A~~lGa~~vv~h~g~-~------~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~t~~~~~~li~ 170 (303)
T 3aal_A 98 AEIERTEAIGAKQLVLHPGA-H------VGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFEELAYIID 170 (303)
T ss_dssp HHHHHHHHHTCSEEEECCEE-C------TTSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCc-C------CCCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCCCHHHHHHHHH
Confidence 12344555799988765431 1 1224566666666666554332223444444321111001237788777776
Q ss_pred HHHHCCcCEEEE-cCCC-----CCCcHHHHHHHHHHHHHhCC-CceEEEEeCCCCC
Q 018252 285 ELHDMGCFEISL-GDTI-----GVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYG 333 (359)
Q Consensus 285 ~l~~~Gad~I~L-~DT~-----G~~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~G 333 (359)
.+-. .+.+.+ -||. |.-....+.++++.+.+.++ +-...+|.||..+
T Consensus 171 ~v~~--~~~vg~~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~~ 224 (303)
T 3aal_A 171 GVAY--NDKLSVCFDTCHTHDAGYDIVNDFDGVLEEFDRIIGLGRLKVLHINDSKN 224 (303)
T ss_dssp HCTT--GGGEEEEEEHHHHHHHTCCHHHHHHHHHHHHHHHTCGGGEEEEEECEESS
T ss_pred hcCC--CCCEEEEEEccCHhhhCCChhhhHHHHHHHHHHhcCcccEEEEEeeCCCC
Confidence 5431 122222 2653 32112245666766655554 4578899997654
No 118
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=94.18 E-value=2.3 Score=40.99 Aligned_cols=134 Identities=11% Similarity=0.075 Sum_probs=89.4
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHH-hCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK-VLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 285 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak-~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~ 285 (359)
++.+.+.|+..+-++.. +. ....-|.+.++.++.+.+.++.++ +.|+.++.-++ +. -..+++...+.++.
T Consensus 87 l~~~~~dgV~y~Eir~~--P~-~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~--~~----R~~~~~~a~~~l~~ 157 (343)
T 3rys_A 87 LERAAAGGVRHAEIMMD--PQ-AHTSRGVALETCVNGVANALATSEEDFGVSTLLIAA--FL----RDMSEDSALEVLDQ 157 (343)
T ss_dssp HHHHHHTTEEEEEEEEC--HH-HHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEE--EE----TTSCHHHHHHHHHH
T ss_pred HHHHHHCCCEEEEEEec--HH-HhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEE--eC----CCCCHHHHHHHHHH
Confidence 45556678887666542 22 223457889999998888888765 46877765444 21 12467777777776
Q ss_pred HHHC--CcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHH-cCCCEEece
Q 018252 286 LHDM--GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ-VSPMHAKPC 353 (359)
Q Consensus 286 l~~~--Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~-AGa~~ID~t 353 (359)
+.+. ++..|.|+=.=....|..+.+.++..++. ++++.+|+.-+.+ ..+...|+. .|+++|+=.
T Consensus 158 a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~--gl~~~~HagE~~~--~~~i~~al~~lg~~rIgHg 224 (343)
T 3rys_A 158 LLAMHAPIAGIGLDSAEVGNPPSKFERLYQRAAEA--GLRRIAHAGEEGP--ASYITEALDVLHVERIDHG 224 (343)
T ss_dssp HHHTTCCCCEEEEESCCTTCCGGGGHHHHHHHHHT--TCEEEEEESSSSC--HHHHHHHHHTSCCSEEEEC
T ss_pred HHhCCCCEEEEecCCcccCCCHHHHHHHHHHHHHC--CCeEEEeeCCCCC--HHHHHHHHhcCCcceeeee
Confidence 6654 45556664333345788888888876663 4789999988754 467788997 999998643
No 119
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=94.18 E-value=0.57 Score=42.07 Aligned_cols=173 Identities=13% Similarity=0.045 Sum_probs=94.6
Q ss_pred HHHHHHHHHHhCCCCEEEEe----ccCCCCCcCCCCCHHHHHHHhhhcCCCeEEE--EeCChHhHHHHHHcCCCEEEEec
Q 018252 149 VKVELIRRLVSSGLPVVEAT----SFVSPKWVPQLADARDVMEAVRDLEGARLPV--LTPNLKGFEAAIAAGAKEVAIFA 222 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG----~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~--l~~n~~gie~a~~aGv~~V~i~~ 222 (359)
+-.++++.+.++|++.|.+- .|.. .... ++++.+++..++.+.+ .+++.++++.++++|++.|.+-.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~-----~~~~--~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~ 104 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGR-----GSNH--ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGT 104 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTS-----CCCH--HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccC-----CChH--HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECc
Confidence 56788999999999999883 3432 1122 4455555444444433 34677889999999999988843
Q ss_pred CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeee-------ecCCCCCCCCHHHHHHHHHHHHHCCcCEEE
Q 018252 223 SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-------VGCPVEGAIPPSKVAYVAKELHDMGCFEIS 295 (359)
Q Consensus 223 s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~-------fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~ 295 (359)
. .. . ..+.+.+++ +..|..+...+.+- +-.-.....+. ...+.++.+.++|++.|.
T Consensus 105 ~---~l--~--------~p~~~~~~~---~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~-~~~e~~~~~~~~G~~~i~ 167 (244)
T 2y88_A 105 A---AL--E--------NPQWCARVI---GEHGDQVAVGLDVQIIDGEHRLRGRGWETDGG-DLWDVLERLDSEGCSRFV 167 (244)
T ss_dssp H---HH--H--------CHHHHHHHH---HHHGGGEEEEEEEEEETTEEEEEEGGGTEEEE-EHHHHHHHHHHTTCCCEE
T ss_pred h---Hh--h--------ChHHHHHHH---HHcCCCEEEEEeccccCCCCEEEECCccCCCC-CHHHHHHHHHhCCCCEEE
Confidence 2 11 0 011223333 33343333223211 00000000011 356778888889999887
Q ss_pred EcCCC--CCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHH-HHHHHHHHc---CCCEEe
Q 018252 296 LGDTI--GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL-PNILISLQV---SPMHAK 351 (359)
Q Consensus 296 L~DT~--G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAl-ANalaAv~A---Ga~~ID 351 (359)
+-+.. |...+. -.++++.+++.. .+++-.= =|... .++..++++ ||+.|-
T Consensus 168 ~~~~~~~~~~~g~-~~~~~~~l~~~~-~ipvia~----GGI~~~~d~~~~~~~~~~Gad~v~ 223 (244)
T 2y88_A 168 VTDITKDGTLGGP-NLDLLAGVADRT-DAPVIAS----GGVSSLDDLRAIATLTHRGVEGAI 223 (244)
T ss_dssp EEETTTTTTTSCC-CHHHHHHHHTTC-SSCEEEE----SCCCSHHHHHHHHTTGGGTEEEEE
T ss_pred EEecCCccccCCC-CHHHHHHHHHhC-CCCEEEE----CCCCCHHHHHHHHhhccCCCCEEE
Confidence 75522 222222 234556666654 2455442 35553 788888888 987654
No 120
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=94.13 E-value=1.9 Score=41.96 Aligned_cols=179 Identities=16% Similarity=0.079 Sum_probs=110.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccC---CCCCcCCCCCHHHHHHHhhh---cCCCeEEEEeCChHhHHHHHHcCCCEEE
Q 018252 146 PTGVKVELIRRLVSSGLPVVEATSFV---SPKWVPQLADARDVMEAVRD---LEGARLPVLTPNLKGFEAAIAAGAKEVA 219 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aGv~~IEvG~fv---spk~vPq~~D~~ev~~~l~~---~~~~~l~~l~~n~~gie~a~~aGv~~V~ 219 (359)
+.+.-+++++.+.++|.+.+-.+.|- +|..+-.+. ++-++.+++ -.+..+..=.-+...++.+.+. ++.+.
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg--~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~-vd~lk 194 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLG--EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY-ADIIQ 194 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCT--HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH-CSEEE
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCC--HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh-CCEEE
Confidence 78999999999999999998877653 222111221 232333332 2455554433466788887777 78887
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHHCCcCEEEEcC
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAKELHDMGCFEISLGD 298 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r-~~~e~l~~~a~~l~~~Gad~I~L~D 298 (359)
+-.. ...| . ++++++...|.+|. +.. +. .+++++...++.+...|...|.||.
T Consensus 195 IgAr-----~~~n--------~----~LL~~va~~~kPVi------lk~---G~~~tl~ei~~Ave~i~~~GN~~viLce 248 (350)
T 1vr6_A 195 IGAR-----NAQN--------F----RLLSKAGSYNKPVL------LKR---GFMNTIEEFLLSAEYIANSGNTKIILCE 248 (350)
T ss_dssp ECGG-----GTTC--------H----HHHHHHHTTCSCEE------EEC---CTTCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ECcc-----cccC--------H----HHHHHHHccCCcEE------EcC---CCCCCHHHHHHHHHHHHHCCCCeEEEEe
Confidence 7432 1111 1 33444446788873 222 34 4899999999999999998888885
Q ss_pred CCCCC----cHHHHHH-HHHHHHHhCCCceEEE---EeCCCCCcHHHHHHHHHHcCCC--EEecee
Q 018252 299 TIGVG----TPGTVVP-MLEAVMAVVPVEKLAV---HLHDTYGQSLPNILISLQVSPM--HAKPCF 354 (359)
Q Consensus 299 T~G~~----~P~~v~~-lv~~l~~~~p~~~L~~---H~HNd~GLAlANalaAv~AGa~--~ID~tl 354 (359)
--+.. ++..+.- .+..+++.+. .++.+ |.=...-+...-+++|+.+||+ .|+.=+
T Consensus 249 RG~~typ~~~~~~vdl~ai~~lk~~~~-lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~ 313 (350)
T 1vr6_A 249 RGIRTFEKATRNTLDISAVPIIRKESH-LPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHP 313 (350)
T ss_dssp CCBCCSCCSSSSBCCTTHHHHHHHHBS-SCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCS
T ss_pred CCCCCCCCcChhhhhHHHHHHHHHhhC-CCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecC
Confidence 22211 2333322 3466777653 46655 6533333447778899999999 887643
No 121
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=94.02 E-value=0.61 Score=45.28 Aligned_cols=140 Identities=14% Similarity=0.030 Sum_probs=88.0
Q ss_pred HHHHHHcCCCEEEEecCC--------chHHH--HhhhcCCHHHHHHHHHHHHHHHHhC-C--CcEEEEEeeeecCCCCCC
Q 018252 207 FEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-S--IPVRGYVSCVVGCPVEGA 273 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~--------S~~~~--~~n~~~t~~e~l~~i~~~i~~Ak~~-G--~~V~~~is~~fg~~~~~r 273 (359)
.++|.++|.|-|.+-..- |+..+ ...+|-+.++-.+-+.++++.+|+. | +.|.+-|+.....+ .+.
T Consensus 164 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~-~G~ 242 (363)
T 3l5l_A 164 ARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDG-RDE 242 (363)
T ss_dssp HHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSS-CHH
T ss_pred HHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCC-CCC
Confidence 356677899988876532 22222 1235667777777778888888876 3 34655565321111 112
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCC--CCC----CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc-HHHHHHHHHHcC
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDT--IGV----GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQVS 346 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT--~G~----~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL-AlANalaAv~AG 346 (359)
.+.+...++++.+.++|+|-|.+... .+. ..|....++++.+++.++ ++|..=+ |. ....+..+++.|
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~G----gI~s~e~a~~~l~~G 317 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAK-LPVTSAW----GFGTPQLAEAALQAN 317 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CCEEECS----STTSHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcC-CcEEEeC----CCCCHHHHHHHHHCC
Confidence 56788999999999999998887652 111 123334567778888764 3444321 22 357788999999
Q ss_pred -CCEEec
Q 018252 347 -PMHAKP 352 (359)
Q Consensus 347 -a~~ID~ 352 (359)
||.|-.
T Consensus 318 ~aD~V~i 324 (363)
T 3l5l_A 318 QLDLVSV 324 (363)
T ss_dssp SCSEEEC
T ss_pred CccEEEe
Confidence 998754
No 122
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=93.91 E-value=0.45 Score=43.14 Aligned_cols=161 Identities=12% Similarity=0.022 Sum_probs=86.0
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe-C--C-----------h-----------
Q 018252 150 KVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-P--N-----------L----------- 204 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~-~--n-----------~----------- 204 (359)
-.+.++.+.++|++.||+..+. -.+.+++.+.+++ .++++.++. + + .
T Consensus 25 ~~~~l~~~~~~G~~~vEl~~~~-------~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 96 (269)
T 3ngf_A 25 FLERFRLAAEAGFGGVEFLFPY-------DFDADVIARELKQ-HNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVD 96 (269)
T ss_dssp HHHHHHHHHHTTCSEEECSCCT-------TSCHHHHHHHHHH-TTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCc-------cCCHHHHHHHHHH-cCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHH
Confidence 3456677788999999997631 1356666666654 355555432 2 1 0
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC----CCCCCHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV----EGAIPPSKVA 280 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~----~~r~~~e~l~ 280 (359)
+.++.|.+.|++.|.+... .+.. .......+...+.+.++.++|++.|+++. +. .-++. ..-.+++.+.
T Consensus 97 ~~i~~A~~lGa~~v~~~~g-~~~~--~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE--~~n~~~~~~~~~~~~~~~~ 169 (269)
T 3ngf_A 97 IALHYALALDCRTLHAMSG-ITEG--LDRKACEETFIENFRYAADKLAPHGITVL--VE--PLNTRNMPGYFIVHQLEAV 169 (269)
T ss_dssp HHHHHHHHTTCCEEECCBC-BCTT--SCHHHHHHHHHHHHHHHHHHHGGGTCEEE--EC--CCCTTTSTTBSCCCHHHHH
T ss_pred HHHHHHHHcCCCEEEEccC-CCCC--CCHHHHHHHHHHHHHHHHHHHHHcCCEEE--Ee--eCCcccCccchhcCHHHHH
Confidence 1244555679999887544 1110 00001134556777888899999998763 32 11111 1134777777
Q ss_pred HHHHHHHHCCcCEEEE-cCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCC
Q 018252 281 YVAKELHDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDT 331 (359)
Q Consensus 281 ~~a~~l~~~Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd 331 (359)
++++.+ +.+.+.+ -|+.=...-. .+....+++ +.+-...+|.+|.
T Consensus 170 ~l~~~v---~~~~vg~~~D~~h~~~~g--~d~~~~l~~-~~~~i~~vHl~D~ 215 (269)
T 3ngf_A 170 GLVKRV---NRPNVAVQLDLYHAQIMD--GDLTRLIEK-MNGAFSHVQIASV 215 (269)
T ss_dssp HHHHHH---CCTTEEEEEEHHHHHHHT--CCHHHHHHH-TTTSEEEEEECCT
T ss_pred HHHHHh---CCCCCCeEEEhhhHHhhC--CCHHHHHHH-hhhhEEEEEEecC
Confidence 777765 3332322 3432111100 012233333 3334678999996
No 123
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=93.80 E-value=0.74 Score=45.08 Aligned_cols=140 Identities=16% Similarity=0.027 Sum_probs=83.9
Q ss_pred HHHHHcCCCEEEEecCC--------chHHH--HhhhcCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeee-ecCCCCCCC
Q 018252 208 EAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCV-VGCPVEGAI 274 (359)
Q Consensus 208 e~a~~aGv~~V~i~~s~--------S~~~~--~~n~~~t~~e~l~~i~~~i~~Ak~~-G~-~V~~~is~~-fg~~~~~r~ 274 (359)
++|.++|.|.|.+-..- |+..+ ....|-+.++-.+.+.++++.+|+. |. .|.+-|+.. +.....+..
T Consensus 173 ~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~ 252 (377)
T 2r14_A 173 QRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDE 252 (377)
T ss_dssp HHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSC
T ss_pred HHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCC
Confidence 45567899988885432 22211 1235667776666777777777664 42 565555421 111011235
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCCC-CCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-CCEEec
Q 018252 275 PPSKVAYVAKELHDMGCFEISLGDTI-GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS-PMHAKP 352 (359)
Q Consensus 275 ~~e~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG-a~~ID~ 352 (359)
+.+...++++.+.++|++-|.+.-.. ....|..-.++++.+++.++ ++|..=+ .+ ....+..+++.| ||.|-.
T Consensus 253 ~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~-iPvi~~G--gi--~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 253 PEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFK-GGLIYCG--NY--DAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCC-SEEEEES--SC--CHHHHHHHHHTTSCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCC-CCEEEEC--CC--CHHHHHHHHHCCCceEEee
Confidence 67889999999999999988885411 00011001356778888876 3554432 22 278889999998 988753
No 124
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=93.80 E-value=1.3 Score=42.91 Aligned_cols=117 Identities=10% Similarity=0.077 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC------------CC---C-------------------CCCCH------
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC------------PV---E-------------------GAIPP------ 276 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~------------~~---~-------------------~r~~~------ 276 (359)
.++.++.++.+++.+++.|-++...|.+. |- +. + ...+|
T Consensus 76 ~d~~i~~~~~l~~~vh~~g~~i~~QL~H~-Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~ 154 (364)
T 1vyr_A 76 SPEQIAAWKKITAGVHAEDGRIAVQLWHT-GRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELD 154 (364)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGG
T ss_pred CHHHHHHHHHHHHHHHhcCCeEEEEeccC-CcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHH
Confidence 35667778888888899998887777531 10 00 0 00123
Q ss_pred ------HHHHHHHHHHHHCCcCEEEEc-------------------CCCCCCc---HHHHHHHHHHHHHhCCCceEEE--
Q 018252 277 ------SKVAYVAKELHDMGCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVPVEKLAV-- 326 (359)
Q Consensus 277 ------e~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p~~~L~~-- 326 (359)
+.+.+.|+.+.++|.|.|-|- |-.|... +..+.++++++++.++..+|++
T Consensus 155 eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrl 234 (364)
T 1vyr_A 155 EIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRV 234 (364)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 577788888899999988772 4445443 3447788999999986337777
Q ss_pred ---EeCCC---CCcHH----HHHHHHHHcCCCEEecee
Q 018252 327 ---HLHDT---YGQSL----PNILISLQVSPMHAKPCF 354 (359)
Q Consensus 327 ---H~HNd---~GLAl----ANalaAv~AGa~~ID~tl 354 (359)
..+++ .+... .-+.++-++|+++|+.+.
T Consensus 235 s~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 272 (364)
T 1vyr_A 235 SPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSE 272 (364)
T ss_dssp CCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEec
Confidence 22332 13333 335566689999999875
No 125
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=93.80 E-value=0.46 Score=45.86 Aligned_cols=142 Identities=15% Similarity=0.167 Sum_probs=89.9
Q ss_pred HHHHHHHHHH-hCCCCEEEEec-cCCCCCcCCCCCHHHHHHHhh---hcCCCeEEEE-----eCChHhHHHHHHcCCCEE
Q 018252 149 VKVELIRRLV-SSGLPVVEATS-FVSPKWVPQLADARDVMEAVR---DLEGARLPVL-----TPNLKGFEAAIAAGAKEV 218 (359)
Q Consensus 149 ~k~~ia~~L~-~aGv~~IEvG~-fvspk~vPq~~D~~ev~~~l~---~~~~~~l~~l-----~~n~~gie~a~~aGv~~V 218 (359)
.-.++++.+. +.|.+.|.+|. ...|...+ ...++..++++ ...++.++.- +.+.+-++.++++|.+..
T Consensus 81 ~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~--vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~ 158 (323)
T 4djd_D 81 EPGRWAQKCVAEYGADLIYLKLDGADPEGAN--HSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGEN 158 (323)
T ss_dssp CHHHHHHHHHHTTCCSEEEEECGGGCTTTTC--CCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSC
T ss_pred hHHHHHHHHHHHcCCCEEEEcCccCCCCCCC--CCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCC
Confidence 3678888888 99999999985 34443222 13333334443 3456667766 445567899999886532
Q ss_pred EEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCc--CEEEE
Q 018252 219 AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGC--FEISL 296 (359)
Q Consensus 219 ~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Ga--d~I~L 296 (359)
.+.-+++.- ++..++..|+++|..|.+ + . ..+.+.+.++.+.+.++|+ +.|.|
T Consensus 159 ~lINsv~~~---------------~~~~m~~laa~~g~~vVl--m----h----~~d~~~~~~l~~~a~~~GI~~e~IIl 213 (323)
T 4djd_D 159 LLLGNAEQE---------------NYKSLTAACMVHKHNIIA--R----S----PLDINICKQLNILINEMNLPLDHIVI 213 (323)
T ss_dssp CEEEEEBTT---------------BCHHHHHHHHHHTCEEEE--E----C----SSCHHHHHHHHHHHHTTTCCGGGEEE
T ss_pred CeEEECCcc---------------cHHHHHHHHHHhCCeEEE--E----c----cchHHHHHHHHHHHHHcCCCHHHEEE
Confidence 222222221 123556677788887732 2 1 2256888899999999999 66776
Q ss_pred cCCCC-C-CcHHHHHHHHHHHHH
Q 018252 297 GDTIG-V-GTPGTVVPMLEAVMA 317 (359)
Q Consensus 297 ~DT~G-~-~~P~~v~~lv~~l~~ 317 (359)
==.+| . -+.+...++++.++.
T Consensus 214 DPg~g~fgk~~e~~l~~l~~ir~ 236 (323)
T 4djd_D 214 DPSIGGLGYGIEYSFSIMERIRL 236 (323)
T ss_dssp ECCCCCTTTTHHHHHHHHHHHHH
T ss_pred eCCCccccCCHHHHHHHHHHHHH
Confidence 44444 2 367788888888885
No 126
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=93.54 E-value=1.1 Score=43.60 Aligned_cols=140 Identities=15% Similarity=0.021 Sum_probs=85.2
Q ss_pred HHHHHcCCCEEEEecCC--------chHHH--HhhhcCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeee--ecCCCCCC
Q 018252 208 EAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCV--VGCPVEGA 273 (359)
Q Consensus 208 e~a~~aGv~~V~i~~s~--------S~~~~--~~n~~~t~~e~l~~i~~~i~~Ak~~-G~-~V~~~is~~--fg~~~~~r 273 (359)
++|.++|.|-|.+-..- |+..+ ....|-+.++-.+.+.++++.+|+. |- .|.+-|+.. |.....+.
T Consensus 168 ~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~ 247 (364)
T 1vyr_A 168 ANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGP 247 (364)
T ss_dssp HHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCT
T ss_pred HHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCC
Confidence 45677899988885532 12111 1235566777677777777777764 32 455555532 11000124
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-CCEEec
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS-PMHAKP 352 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG-a~~ID~ 352 (359)
.+.+...++++++.++|++-|.+....-...|..-.++++.+++.++ ++|..=.- + ....+..+++.| ||.|-.
T Consensus 248 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~-iPvi~~Gg--i--t~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 248 NEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFH-GVIIGAGA--Y--TAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCC-SEEEEESS--C--CHHHHHHHHHTTSCSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCC-CCEEEECC--c--CHHHHHHHHHCCCccEEEE
Confidence 57778999999999999999888652100011111356788888876 35444322 2 378889999999 998754
No 127
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=93.47 E-value=0.88 Score=40.25 Aligned_cols=155 Identities=17% Similarity=0.081 Sum_probs=88.1
Q ss_pred HHHHHHHHHhCCCCEEEEeccC-CCCCcCCCCCH---HHHHHHhhhc---CCCeEEEEeCChHhHHHHHHcCCCEEEEec
Q 018252 150 KVELIRRLVSSGLPVVEATSFV-SPKWVPQLADA---RDVMEAVRDL---EGARLPVLTPNLKGFEAAIAAGAKEVAIFA 222 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~fv-spk~vPq~~D~---~ev~~~l~~~---~~~~l~~l~~n~~gie~a~~aGv~~V~i~~ 222 (359)
-.+.++.+.+.|++.|++.... ++ ... .++.+.+++. .++.+.+ | ..++.+.++|++.|++-.
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~------~~~~~~~~~~~~l~~~~~~~~v~v~v---~-~~~~~a~~~gad~v~l~~ 102 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDA------LTGEARIKFAEKAQAACREAGVPFIV---N-DDVELALNLKADGIHIGQ 102 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTC------CCHHHHHHHHHHHHHHHHHHTCCEEE---E-SCHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCH------hHHHHHHHHHHHHHHHHHHcCCeEEE---c-CHHHHHHHcCCCEEEECC
Confidence 5678889999999999998642 22 222 3333333321 2343333 1 457889999999998832
Q ss_pred CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE---cCC
Q 018252 223 SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL---GDT 299 (359)
Q Consensus 223 s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L---~DT 299 (359)
.+. . +. +..+.+|. +...++ ..++++ ++.+.+.|+|.|.+ -||
T Consensus 103 --~~~--------~----~~------~~~~~~g~-~~~~~s---------~~t~~e----~~~a~~~g~d~v~~~~v~~t 148 (227)
T 2tps_A 103 --EDA--------N----AK------EVRAAIGD-MILGVS---------AHTMSE----VKQAEEDGADYVGLGPIYPT 148 (227)
T ss_dssp --TSS--------C----HH------HHHHHHTT-SEEEEE---------ECSHHH----HHHHHHHTCSEEEECCSSCC
T ss_pred --Ccc--------C----HH------HHHHhcCC-cEEEEe---------cCCHHH----HHHHHhCCCCEEEECCCcCC
Confidence 110 0 11 11122454 322232 135544 34456789999886 355
Q ss_pred CCC---CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 300 IGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 300 ~G~---~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
..- ..|.. .++++.+++..+++++..= -|....|+..++++|++.|.+.
T Consensus 149 ~~~~~~~~~~~-~~~l~~~~~~~~~~pvia~----GGI~~~nv~~~~~~Ga~gv~vg 200 (227)
T 2tps_A 149 ETKKDTRAVQG-VSLIEAVRRQGISIPIVGI----GGITIDNAAPVIQAGADGVSMI 200 (227)
T ss_dssp CSSSSCCCCCT-THHHHHHHHTTCCCCEEEE----SSCCTTTSHHHHHTTCSEEEES
T ss_pred CCCCCCCCccC-HHHHHHHHHhCCCCCEEEE----cCCCHHHHHHHHHcCCCEEEEh
Confidence 321 22322 3455666665543455442 4666678888889999998865
No 128
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.45 E-value=0.78 Score=42.45 Aligned_cols=92 Identities=13% Similarity=-0.026 Sum_probs=59.4
Q ss_pred HHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCC-------------------CCc
Q 018252 245 RAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIG-------------------VGT 304 (359)
Q Consensus 245 ~~~i~~Ak~~G~~-V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G-------------------~~~ 304 (359)
.+..+.+|+.|-+ +.+||+ .+.-+.+...++++.+.+.|+|.|-|.=... -.+
T Consensus 5 ~~~f~~~~~~~~~~~i~~i~-------~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~ 77 (262)
T 2ekc_A 5 SDKFTELKEKREKALVSYLM-------VGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIR 77 (262)
T ss_dssp HHHHHHHHHHTBCEEEEEEE-------TTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCceEEEEec-------CCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCC
Confidence 3444444444443 455554 2344778889999999999999877732221 134
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHH----------HHHHHHcCCCEE
Q 018252 305 PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPN----------ILISLQVSPMHA 350 (359)
Q Consensus 305 P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlAN----------alaAv~AGa~~I 350 (359)
...+-++++.+++.+|++|+.+ |+..| +-.+.++|++.+
T Consensus 78 ~~~~~~~v~~ir~~~~~~Pi~~-------m~y~n~v~~~g~~~f~~~~~~aG~dgv 126 (262)
T 2ekc_A 78 FEDVLELSETLRKEFPDIPFLL-------MTYYNPIFRIGLEKFCRLSREKGIDGF 126 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCEEE-------ECCHHHHHHHCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHhhcCCCCEEE-------EecCcHHHHhhHHHHHHHHHHcCCCEE
Confidence 4566788999999886778877 22333 244779999854
No 129
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=93.31 E-value=5.3 Score=39.31 Aligned_cols=158 Identities=9% Similarity=0.060 Sum_probs=96.4
Q ss_pred CCCCHHHHHHHHHHHHh-CCCCEEEEeccCCCCCcCCC-CC--HHHHHHHhhhcCCCeEEEEeCCh----------HhHH
Q 018252 143 NTVPTGVKVELIRRLVS-SGLPVVEATSFVSPKWVPQL-AD--ARDVMEAVRDLEGARLPVLTPNL----------KGFE 208 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~-aGv~~IEvG~fvspk~vPq~-~D--~~ev~~~l~~~~~~~l~~l~~n~----------~gie 208 (359)
..++.++..++++.+.+ .|+..|-++.. .| -+ .| ..++++.+++.++++...+.-|. +-++
T Consensus 143 ~~ls~eei~~~i~~i~~~~gi~~V~ltGG-EP----ll~~d~~L~~il~~l~~~~~v~~i~i~Tng~~~~p~~it~e~l~ 217 (416)
T 2a5h_A 143 DSMPMERIDKAIDYIRNTPQVRDVLLSGG-DA----LLVSDETLEYIIAKLREIPHVEIVRIGSRTPVVLPQRITPELVN 217 (416)
T ss_dssp SBCCHHHHHHHHHHHHTCTTCCEEEEEES-CT----TSSCHHHHHHHHHHHHTSTTCCEEEEECSHHHHCGGGCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCcEEEEECC-CC----CCCCHHHHHHHHHHHHhcCCccEEEEEecccccccccCCHHHHH
Confidence 45889999999999998 79988877542 22 22 23 45666777776665433333322 2344
Q ss_pred HHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHH
Q 018252 209 AAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHD 288 (359)
Q Consensus 209 ~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~ 288 (359)
...++ +.+.+.+..... ..+ + +.+.+.++.+++.|+.+.......-|. ..+.+.+.++++.+.+
T Consensus 218 ~L~~~--~~v~Isl~~~~~---~ei--~-----~~v~~ai~~L~~aGi~v~i~~vll~Gv----Nd~~e~l~~l~~~l~~ 281 (416)
T 2a5h_A 218 MLKKY--HPVWLNTHFNHP---NEI--T-----EESTRACQLLADAGVPLGNQSVLLRGV----NDCVHVMKELVNKLVK 281 (416)
T ss_dssp HHGGG--CSEEEEECCCSG---GGC--C-----HHHHHHHHHHHHTTCCEEEEEECCTTT----TCSHHHHHHHHHHHHH
T ss_pred HHHhc--CcEEEEEecCCH---HHH--h-----HHHHHHHHHHHHcCCEEEEEEEEECCC----CCCHHHHHHHHHHHHH
Confidence 44344 667776654322 112 2 556677788888999775443311111 2467789999999999
Q ss_pred CCcCE--EEEcCCC-CC----CcHHHHHHHHHHHHHhCCC
Q 018252 289 MGCFE--ISLGDTI-GV----GTPGTVVPMLEAVMAVVPV 321 (359)
Q Consensus 289 ~Gad~--I~L~DT~-G~----~~P~~v~~lv~~l~~~~p~ 321 (359)
.|++. +.+.+.. |. ..+.+..++++.+++.+++
T Consensus 282 lgv~~~~i~~~~~~~g~~~~~~~~~~~~eil~~l~~~~~G 321 (416)
T 2a5h_A 282 IRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGHTSG 321 (416)
T ss_dssp TTEEEEEEECCCCBTTCGGGCCCHHHHHHHHHTTBTTBCG
T ss_pred cCCceEEEeecCCCCCcccccCCcccHHHHHHHHHHHCCC
Confidence 99874 4566643 32 2345566777777765543
No 130
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.25 E-value=1.4 Score=41.69 Aligned_cols=138 Identities=14% Similarity=0.110 Sum_probs=82.5
Q ss_pred CCeEEEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHh-CCCcEEEEEeeeecCCCCC
Q 018252 194 GARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV-LSIPVRGYVSCVVGCPVEG 272 (359)
Q Consensus 194 ~~~l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~-~G~~V~~~is~~fg~~~~~ 272 (359)
+..+-+.+-+..++..|.+.|+++|.+..... .=|.|.- . .+++.+++ ..++|. ++. -|..+
T Consensus 39 ~~~lEvc~~s~~~a~~A~~gGAdRIELc~~l~------~GGlTPS--~----g~i~~a~~~~~ipV~--vMI---RPRgG 101 (287)
T 3iwp_A 39 GFLMEVCVDSVESAVNAERGGADRIELCSGLS------EGGTTPS--M----GVLQVVKQSVQIPVF--VMI---RPRGG 101 (287)
T ss_dssp CSEEEEEESSHHHHHHHHHHTCSEEEECBCGG------GTCBCCC--H----HHHHHHHTTCCSCEE--EEC---CSSSS
T ss_pred CceEEEEeCCHHHHHHHHHhCCCEEEECCCCC------CCCCCCC--H----HHHHHHHHhcCCCeE--EEE---ecCCC
Confidence 45555667789999999999999999974411 0122321 1 22333333 346654 331 34443
Q ss_pred --CCCHHHH---HHHHHHHHHCCcCEEEEc--CCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCC-cHHHHHHHHHH
Q 018252 273 --AIPPSKV---AYVAKELHDMGCFEISLG--DTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG-QSLPNILISLQ 344 (359)
Q Consensus 273 --r~~~e~l---~~~a~~l~~~Gad~I~L~--DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~G-LAlANalaAv~ 344 (359)
.++.+++ .+-++.+.++|+|.|.+. +.-|......+.+|++... ..++.||---|.= -.....-..++
T Consensus 102 dF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~----~l~vTFHRAFD~~~d~~~Ale~Li~ 177 (287)
T 3iwp_A 102 DFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR----PLPVTFHRAFDMVHDPMAALETLLT 177 (287)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT----TSCEEECGGGGGCSCHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC----CCcEEEECchhccCCHHHHHHHHHH
Confidence 3565554 445667789999999887 3567778888888887543 2467776553321 13333344445
Q ss_pred cCCCEEec
Q 018252 345 VSPMHAKP 352 (359)
Q Consensus 345 AGa~~ID~ 352 (359)
.|+++|=+
T Consensus 178 lGvdrILT 185 (287)
T 3iwp_A 178 LGFERVLT 185 (287)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEC
Confidence 58888744
No 131
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=93.06 E-value=0.42 Score=44.74 Aligned_cols=171 Identities=16% Similarity=0.114 Sum_probs=87.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCC-CCC-cCCC-----------CCHH---HHHHHhhhcCCCeEEEEeC-Ch----
Q 018252 146 PTGVKVELIRRLVSSGLPVVEATSFVS-PKW-VPQL-----------ADAR---DVMEAVRDLEGARLPVLTP-NL---- 204 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aGv~~IEvG~fvs-pk~-vPq~-----------~D~~---ev~~~l~~~~~~~l~~l~~-n~---- 204 (359)
+.+.-+++++.|.+. +|.||+|.+-+ |-+ .|.. -..+ +..+.+++..++.+..+.- |.
T Consensus 28 ~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~ 106 (271)
T 1ujp_A 28 SREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAW 106 (271)
T ss_dssp CHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHHHH
T ss_pred ChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHh
Confidence 456788899999999 99999997433 311 0100 0111 2233333335566666542 31
Q ss_pred ---HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH
Q 018252 205 ---KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY 281 (359)
Q Consensus 205 ---~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~ 281 (359)
+.++.+.++|++-+-+..-. . +.+.+.++.++++|+.... + -.| .++.+.+.+
T Consensus 107 g~~~f~~~~~~aG~dGviv~Dl~------------~----ee~~~~~~~~~~~gl~~i~-l----iap---~s~~eri~~ 162 (271)
T 1ujp_A 107 GPERFFGLFKQAGATGVILPDLP------------P----DEDPGLVRLAQEIGLETVF-L----LAP---TSTDARIAT 162 (271)
T ss_dssp CHHHHHHHHHHHTCCEEECTTCC------------G----GGCHHHHHHHHHHTCEEEC-E----ECT---TCCHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEecCCC------------H----HHHHHHHHHHHHcCCceEE-E----eCC---CCCHHHHHH
Confidence 34667888999965553211 1 2344667788889986432 1 111 245554444
Q ss_pred HHHHHHHCCcCEEEEc---CCCCCCc--HHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 282 VAKELHDMGCFEISLG---DTIGVGT--PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L~---DT~G~~~--P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
+++. +..-+++. -+.|..+ +..+.++++.+++.. ++++.+= .|.....-.+.+ +||+.|=
T Consensus 163 ia~~----~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~vG----fGI~t~e~a~~~-~~ADgVI 227 (271)
T 1ujp_A 163 VVRH----ATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART-ALPVAVG----FGVSGKATAAQA-AVADGVV 227 (271)
T ss_dssp HHTT----CCSCEEEECC------------CCHHHHHHHHTTC-CSCEEEE----SCCCSHHHHHHH-TTSSEEE
T ss_pred HHHh----CCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CCCEEEE----cCCCCHHHHHHh-cCCCEEE
Confidence 4443 33333332 2344433 344568888888865 3444432 233323333345 8887653
No 132
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=93.01 E-value=2 Score=41.45 Aligned_cols=136 Identities=15% Similarity=0.122 Sum_probs=78.3
Q ss_pred HHHHHHcCCCEEEEec--CCchHHHHhhhcCCHHHHHHHHHHHHHHHHh-CCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFA--SASEAFSKSNINCSIEDSLVRYRAVAHAAKV-LSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 283 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~--s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~-~G~~V~~~is~~fg~~~~~r~~~e~l~~~a 283 (359)
.+++.++|+|.|.+-. |.+... ....|.+...-.+.+.++++..++ .++.|..-+.. |.. ...+.+...+++
T Consensus 76 A~~a~~~G~D~IeIn~gcP~~~~~-~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~--g~~--~~~~~~~~~~~a 150 (350)
T 3b0p_A 76 ARIGEAFGYDEINLNLGCPSEKAQ-EGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRL--GLE--GKETYRGLAQSV 150 (350)
T ss_dssp HHHHHHTTCSEEEEEECCCSHHHH-HTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEES--CBT--TCCCHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCcCCCCcCc-CCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEec--CcC--ccccHHHHHHHH
Confidence 4556678999877754 332221 223444433334455555555555 36766544432 211 124567889999
Q ss_pred HHHHHCCcCEEEEcCCC---CCCcH------HHHHHHHHHHHHhCCCceEEEEeCCCCCc-HHHHHHHHHHcCCCEEec
Q 018252 284 KELHDMGCFEISLGDTI---GVGTP------GTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQVSPMHAKP 352 (359)
Q Consensus 284 ~~l~~~Gad~I~L~DT~---G~~~P------~~v~~lv~~l~~~~p~~~L~~H~HNd~GL-AlANalaAv~AGa~~ID~ 352 (359)
+.+.++|++.|.+-.-. |...+ ..-.+++..+++.+|.++|-.=+ |. ....+..+++ ||+.|-.
T Consensus 151 ~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianG----gI~s~eda~~~l~-GaD~V~i 224 (350)
T 3b0p_A 151 EAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNG----GIRSLEEALFHLK-RVDGVML 224 (350)
T ss_dssp HHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEES----SCCSHHHHHHHHT-TSSEEEE
T ss_pred HHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEEC----CcCCHHHHHHHHh-CCCEEEE
Confidence 99999999999886532 22111 11357788899888667776544 32 2344555555 9887743
No 133
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=92.93 E-value=0.85 Score=40.64 Aligned_cols=156 Identities=11% Similarity=-0.012 Sum_probs=81.0
Q ss_pred HHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe-C-------------Ch-----------HhH
Q 018252 153 LIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-P-------------NL-----------KGF 207 (359)
Q Consensus 153 ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~-~-------------n~-----------~gi 207 (359)
.++.+.++|++.||+..+. -.+.+++.+.+++ .++++.++. + +. +.+
T Consensus 20 ~l~~~~~~G~~~vEl~~~~-------~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 1k77_A 20 RFAAARKAGFDAVEFLFPY-------NYSTLQIQKQLEQ-NHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLAL 91 (260)
T ss_dssp HHHHHHHHTCSEEECSCCT-------TSCHHHHHHHHHH-TTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEecCCC-------CCCHHHHHHHHHH-cCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHH
Confidence 3455667899999998631 1355666665553 345554332 1 10 124
Q ss_pred HHHHHcCCCEEEEecCCchHHHHhhhcCC----HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC----CCCCCHHHH
Q 018252 208 EAAIAAGAKEVAIFASASEAFSKSNINCS----IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV----EGAIPPSKV 279 (359)
Q Consensus 208 e~a~~aGv~~V~i~~s~S~~~~~~n~~~t----~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~----~~r~~~e~l 279 (359)
+.|.+.|++.|.+.....+ -+.+ .+...+.+.++.++|++.|+++ .+. .-.+. ..-.+++.+
T Consensus 92 ~~a~~lG~~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l--~~E--~~~~~~~~~~~~~~~~~~ 161 (260)
T 1k77_A 92 EYALALNCEQVHVMAGVVP------AGEDAERYRAVFIDNIRYAADRFAPHGKRI--LVE--ALSPGVKPHYLFSSQYQA 161 (260)
T ss_dssp HHHHHTTCSEEECCCCBCC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCEE--EEC--CCCTTTSTTBSCCSHHHH
T ss_pred HHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCEE--EEE--eCCccCCCcCccCCHHHH
Confidence 4556679998877533211 0112 2445677788888899999865 232 21111 113577777
Q ss_pred HHHHHHHHHCCcCEEE-EcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCC
Q 018252 280 AYVAKELHDMGCFEIS-LGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY 332 (359)
Q Consensus 280 ~~~a~~l~~~Gad~I~-L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~ 332 (359)
.++++.+ +...+. .-|+. .+.-.. .+....+++ +.+-...+|.||..
T Consensus 162 ~~l~~~~---~~~~~g~~~D~~-h~~~~~-~d~~~~l~~-~~~~i~~vH~~D~~ 209 (260)
T 1k77_A 162 LAIVEEV---ARDNVFIQLDTF-HAQKVD-GNLTHLIRD-YAGKYAHVQIAGLP 209 (260)
T ss_dssp HHHHHHH---CCTTEEEEEEHH-HHHHHT-CCHHHHHHH-TTTSEEEEEECCTT
T ss_pred HHHHHHh---CCCCEEEEeeHH-HHHhhC-CCHHHHHHH-hhhheeEEEECCCC
Confidence 7777655 322222 23442 111000 012223333 33346788998753
No 134
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=92.90 E-value=1.9 Score=42.02 Aligned_cols=117 Identities=10% Similarity=0.066 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC---------------CC----------C-----CCCCH----------
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC---------------PV----------E-----GAIPP---------- 276 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~---------------~~----------~-----~r~~~---------- 276 (359)
.++.++.++.+++..+++|-++...|.+. |- |- . ....|
T Consensus 86 ~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ 164 (376)
T 1icp_A 86 TKEQVEAWKPIVDAVHAKGGIFFCQIWHV-GRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQ 164 (376)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEECC-TTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCeEEEEeecC-CCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHH
Confidence 35667788888888899998887777641 10 00 0 00122
Q ss_pred --HHHHHHHHHHHHCCcCEEEEc-------------------CCCCCCc---HHHHHHHHHHHHHhCCCceEEEEeCCC-
Q 018252 277 --SKVAYVAKELHDMGCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVPVEKLAVHLHDT- 331 (359)
Q Consensus 277 --e~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p~~~L~~H~HNd- 331 (359)
+.+.+.++.+.++|.|.|.|- |-.|... +..+.++++++++.++..+|++-.+-+
T Consensus 165 ~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~ 244 (376)
T 1icp_A 165 IVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFA 244 (376)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEecccc
Confidence 577788888999999977762 4445433 444788899999988633777766622
Q ss_pred ------CCc----HHHHHHHHHHcCCCEEecee
Q 018252 332 ------YGQ----SLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 332 ------~GL----AlANalaAv~AGa~~ID~tl 354 (359)
.+. ++.-+.+.-++|+++|+.+.
T Consensus 245 ~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 277 (376)
T 1icp_A 245 HYNEAGDTNPTALGLYMVESLNKYDLAYCHVVE 277 (376)
T ss_dssp CTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEEC
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 123 34444555678999999864
No 135
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=92.73 E-value=2.6 Score=40.76 Aligned_cols=137 Identities=9% Similarity=0.019 Sum_probs=84.6
Q ss_pred hHHHHHHcCCCEEEEe--cCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCC-------H
Q 018252 206 GFEAAIAAGAKEVAIF--ASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP-------P 276 (359)
Q Consensus 206 gie~a~~aGv~~V~i~--~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~-------~ 276 (359)
.++++++.|.|-|.+. ....+.. .. .++.++.+.++.+.|++.|+++-+-+.. +........+ |
T Consensus 115 sve~a~~~GADAVk~lv~~g~d~~~-e~-----~~~q~~~l~rv~~ec~~~GiPlllEil~-y~~~~~~~~~~~~a~~~p 187 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYDVDGDP-QV-----NVQKQAYIERIGSECQAEDIPFFLEILT-YDETISNNSSVEFAKVKV 187 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEECTTSCH-HH-----HHHHHHHHHHHHHHHHHHTCCEEEEEEE-CBTTBSCTTSHHHHTTHH
T ss_pred CHHHHHHcCCCEEEEEEEcCCCchH-HH-----HHHHHHHHHHHHHHHHHcCCceEEEEec-cCCCCCCCcchhhhccCH
Confidence 4899999999976654 3211110 00 1357888999999999999998654432 2221123444 4
Q ss_pred HHHHHHHHHH--HHCCcCEEEEcCCC------CCC------cHHHHHHHHHHHHHhCCCceEEE-EeCCCCCcHHHHHHH
Q 018252 277 SKVAYVAKEL--HDMGCFEISLGDTI------GVG------TPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILI 341 (359)
Q Consensus 277 e~l~~~a~~l--~~~Gad~I~L~DT~------G~~------~P~~v~~lv~~l~~~~p~~~L~~-H~HNd~GLAlANala 341 (359)
+.+...++.+ .++|+|.+-+.=|. |.. +-.+..+.++.+.+..| +|+-+ =+=-+.-.-+-....
T Consensus 188 ~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~-~P~v~lsgG~~~~~fl~~v~~ 266 (332)
T 3iv3_A 188 HKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTD-LPYIYLSAGVSAELFQETLVF 266 (332)
T ss_dssp HHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCS-SCEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCC-CCEEEECCCCCHHHHHHHHHH
Confidence 4599999999 67899998876333 211 33555566766666544 45432 222233344556678
Q ss_pred HHHcCC--CEE
Q 018252 342 SLQVSP--MHA 350 (359)
Q Consensus 342 Av~AGa--~~I 350 (359)
|+++|| .-|
T Consensus 267 A~~aGa~f~Gv 277 (332)
T 3iv3_A 267 AHKAGAKFNGV 277 (332)
T ss_dssp HHHHTCCCCEE
T ss_pred HHHcCCCcceE
Confidence 999999 544
No 136
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=92.70 E-value=1.3 Score=42.31 Aligned_cols=115 Identities=13% Similarity=0.081 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEeeeecC----------CC-----CC-C----CC-------HHHHHHHHHHHHHCC
Q 018252 238 EDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC----------PV-----EG-A----IP-------PSKVAYVAKELHDMG 290 (359)
Q Consensus 238 ~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~----------~~-----~~-r----~~-------~e~l~~~a~~l~~~G 290 (359)
++.++.++.+++..++.|-++...|.+. |- |- .. . .+ .+.+.+.++.+.++|
T Consensus 79 d~~~~~~~~~~~~vh~~g~~i~~QL~h~-Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aG 157 (338)
T 1z41_A 79 DEHIEGFAKLTEQVKEQGSKIGIQLAHA-GRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAG 157 (338)
T ss_dssp THHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCC-CcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3456667788888889998887777532 10 00 00 0 11 246677788888999
Q ss_pred cCEEEEc-------------------CCCCCCc---HHHHHHHHHHHHHhCCCceEEEEeCC----CCCc----HHHHHH
Q 018252 291 CFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVPVEKLAVHLHD----TYGQ----SLPNIL 340 (359)
Q Consensus 291 ad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p~~~L~~H~HN----d~GL----AlANal 340 (359)
.|.|.|- |-.|... +..+.++++++++.+ +.+|.+-.-- +-|. ++.-+.
T Consensus 158 fDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~~g~~~~~~~~~a~ 236 (338)
T 1z41_A 158 FDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTDKGLDIADHIGFAK 236 (338)
T ss_dssp CSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCSTTSCCHHHHHHHHH
T ss_pred CCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCCCCCCHHHHHHHHH
Confidence 9977653 3333332 455788999999988 4567765321 1133 334455
Q ss_pred HHHHcCCCEEecee
Q 018252 341 ISLQVSPMHAKPCF 354 (359)
Q Consensus 341 aAv~AGa~~ID~tl 354 (359)
+..++|+++|+++-
T Consensus 237 ~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 237 WMKEQGVDLIDCSS 250 (338)
T ss_dssp HHHHTTCCEEEEEC
T ss_pred HHHHcCCCEEEEec
Confidence 56689999999864
No 137
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=92.68 E-value=2.4 Score=41.39 Aligned_cols=116 Identities=14% Similarity=0.079 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEeeeecC---------------C----CC----------------CCCCH------
Q 018252 238 EDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC---------------P----VE----------------GAIPP------ 276 (359)
Q Consensus 238 ~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~---------------~----~~----------------~r~~~------ 276 (359)
++.++.++.+++..+++|-++...|.+. |- | .. ....|
T Consensus 81 d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~ 159 (377)
T 2r14_A 81 DAQEAGWKGVVEAVHAKGGRIALQLWHV-GRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETD 159 (377)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGG
T ss_pred HHHHHHHHHHHHHHhhcCCeEEEEccCC-ccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHH
Confidence 4566777888888899998887777542 10 0 00 00123
Q ss_pred ------HHHHHHHHHHHHCCcCEEEE-------------------cCCCCCCc---HHHHHHHHHHHHHhCCCceEEEEe
Q 018252 277 ------SKVAYVAKELHDMGCFEISL-------------------GDTIGVGT---PGTVVPMLEAVMAVVPVEKLAVHL 328 (359)
Q Consensus 277 ------e~l~~~a~~l~~~Gad~I~L-------------------~DT~G~~~---P~~v~~lv~~l~~~~p~~~L~~H~ 328 (359)
+.+.+.|+.+.++|.|.|-| .|-.|... +..+.++++++++.++..+|++-.
T Consensus 160 eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrl 239 (377)
T 2r14_A 160 EIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRL 239 (377)
T ss_dssp GHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEe
Confidence 57778888889999998777 25555543 344778899999988633777764
Q ss_pred CC--CC-----Cc----HHHHHHHHHHcCCCEEecee
Q 018252 329 HD--TY-----GQ----SLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 329 HN--d~-----GL----AlANalaAv~AGa~~ID~tl 354 (359)
.- .+ |. ++.-+.+.-++|+++|+++-
T Consensus 240 s~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 240 TPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp CTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 32 11 33 33335566689999999864
No 138
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=92.63 E-value=2.4 Score=41.20 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC--------------C----C-C---------------CCCCH------
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC--------------P----V-E---------------GAIPP------ 276 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~--------------~----~-~---------------~r~~~------ 276 (359)
.++.++.++.+++.+++.|-++...|.+. |- | . . ....|
T Consensus 76 ~d~~i~~~~~l~~~vh~~g~~i~~QL~H~-Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~ 154 (365)
T 2gou_A 76 TPEQIAGWRIVTEAVHAKGCAIFAQLWHV-GRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKA 154 (365)
T ss_dssp SHHHHHHHHHHHHHHHHHSCEEEEEEECC-TTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHH
T ss_pred CHHHHHHHHHHHHHHHhcCCeEEEEeecC-CCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHH
Confidence 35667777888888888898877777531 10 0 0 0 00223
Q ss_pred ------HHHHHHHHHHHHCCcCEEEE-------------------cCCCCCCc---HHHHHHHHHHHHHhCCCceEEEEe
Q 018252 277 ------SKVAYVAKELHDMGCFEISL-------------------GDTIGVGT---PGTVVPMLEAVMAVVPVEKLAVHL 328 (359)
Q Consensus 277 ------e~l~~~a~~l~~~Gad~I~L-------------------~DT~G~~~---P~~v~~lv~~l~~~~p~~~L~~H~ 328 (359)
+.+.+.++.+.++|.|.|-| .|-.|... +..+.++++++++.++..+|++-.
T Consensus 155 eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vri 234 (365)
T 2gou_A 155 DIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRL 234 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 57778888889999998887 33444332 345778899999988632777744
Q ss_pred CC--C-----CCcH----HHHHHHHHHcCCCEEecee
Q 018252 329 HD--T-----YGQS----LPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 329 HN--d-----~GLA----lANalaAv~AGa~~ID~tl 354 (359)
.- . -|.. +.-+.++.++|+++|+++-
T Consensus 235 s~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~ 271 (365)
T 2gou_A 235 APLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAE 271 (365)
T ss_dssp CSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 32 1 1233 3335666789999999874
No 139
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=92.57 E-value=5.1 Score=37.49 Aligned_cols=157 Identities=12% Similarity=0.043 Sum_probs=92.6
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe----CChHhHHHHHHcCCCEEEEecCC
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT----PNLKGFEAAIAAGAKEVAIFASA 224 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~----~n~~gie~a~~aGv~~V~i~~s~ 224 (359)
+-.++++...+.|...|-+-- .+++.. ...+. +..+++.-+ +.++. ....++..+.++|++.|.+....
T Consensus 80 dp~~~A~~y~~~GA~~IsVlt--d~~~f~--Gs~~~-L~~ir~~v~--lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~ 152 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLT--DTPSFQ--GAPEF-LTAARQACS--LPALRKDFLFDPYQVYEARSWGADCILIIMAS 152 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEEC--CSTTTC--CCHHH-HHHHHHTSS--SCEEEESCCCSTHHHHHHHHTTCSEEEEETTT
T ss_pred CHHHHHHHHHHCCCCEEEEec--cccccC--CCHHH-HHHHHHhcC--CCEEECCccCCHHHHHHHHHcCCCEEEEcccc
Confidence 456789999999999997731 111110 12233 344443322 23333 34567999999999999987652
Q ss_pred chHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC----CC
Q 018252 225 SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD----TI 300 (359)
Q Consensus 225 S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~D----T~ 300 (359)
= + -+.+.+++++|+++|+.+-+.+ ++.++ ++++.++|++.|.+-- |.
T Consensus 153 L----------~----~~~l~~l~~~a~~lGl~~lvev-----------h~~eE----l~~A~~~ga~iIGinnr~l~t~ 203 (272)
T 3tsm_A 153 V----------D----DDLAKELEDTAFALGMDALIEV-----------HDEAE----MERALKLSSRLLGVNNRNLRSF 203 (272)
T ss_dssp S----------C----HHHHHHHHHHHHHTTCEEEEEE-----------CSHHH----HHHHTTSCCSEEEEECBCTTTC
T ss_pred c----------C----HHHHHHHHHHHHHcCCeEEEEe-----------CCHHH----HHHHHhcCCCEEEECCCCCccC
Confidence 1 1 1346788889999999874433 35444 3556689999877652 22
Q ss_pred CCCcHHHHHHHHHHHHHhCC-CceEEEEeCCCCCc-HHHHHHHHHHcCCCEE
Q 018252 301 GVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQ-SLPNILISLQVSPMHA 350 (359)
Q Consensus 301 G~~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~GL-AlANalaAv~AGa~~I 350 (359)
++ .+..+.+++ +.+| ++++-.= -|. ....+..+.++||+.|
T Consensus 204 ~~-dl~~~~~L~----~~ip~~~~vIae----sGI~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 204 EV-NLAVSERLA----KMAPSDRLLVGE----SGIFTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp CB-CTHHHHHHH----HHSCTTSEEEEE----SSCCSHHHHHHHHTTTCCEE
T ss_pred CC-ChHHHHHHH----HhCCCCCcEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 22 234444444 4444 2333221 122 3467777888998876
No 140
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=92.53 E-value=1.4 Score=40.82 Aligned_cols=174 Identities=16% Similarity=0.066 Sum_probs=88.4
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcCCC---CCHHHHHHHhhhcCCCeEEEEeC-------------Ch-----------
Q 018252 152 ELIRRLVSSGLPVVEATSFVSPKWVPQL---ADARDVMEAVRDLEGARLPVLTP-------------NL----------- 204 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG~fvspk~vPq~---~D~~ev~~~l~~~~~~~l~~l~~-------------n~----------- 204 (359)
.+.+.+.++|++.||+.......+.|.- .+.+++.+.+++ .++++.++.. +.
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gl~i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~ 117 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRK-AGLTIESTFGGLASYTYNHFLAPTLELQSLGYQHLK 117 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHH-TTCEEEEEECCHHHHTSCBTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHH-cCCeEEEeeccccccccccCCCCCHHHHHHHHHHHH
Confidence 4566778999999999863211111110 023333333332 4666654321 11
Q ss_pred HhHHHHHHcCCCEEEEecCC-c-hHHHH-hhhcCCHHHHHHHHHHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASA-S-EAFSK-SNINCSIEDSLVRYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVA 280 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~-S-~~~~~-~n~~~t~~e~l~~i~~~i~~Ak~~G~~-V~~~is~~fg~~~~~r~~~e~l~ 280 (359)
+.++.|.+.|++.|.+.... + ..+.. .......+...+.+.++.++|++.|++ +. +...-.. .....+++.+.
T Consensus 118 ~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~--lE~~~~~-~~~~~t~~~~~ 194 (316)
T 3qxb_A 118 RAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLY--VEPVPLA-TEFPSSAADAA 194 (316)
T ss_dssp HHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEE--ECCCSCT-TBSSCSHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEE--EEecCCc-cccCCCHHHHH
Confidence 12445566799988653321 1 11100 000011345677788899999999987 52 3210011 11235788888
Q ss_pred HHHHHHHHCCcCEEEE-cCCCCCCc------HHHHHHHHHHHHHhCCCceEEEEeCCCCC
Q 018252 281 YVAKELHDMGCFEISL-GDTIGVGT------PGTVVPMLEAVMAVVPVEKLAVHLHDTYG 333 (359)
Q Consensus 281 ~~a~~l~~~Gad~I~L-~DT~G~~~------P~~v~~lv~~l~~~~p~~~L~~H~HNd~G 333 (359)
++++.+.+.+.+.|.+ -||.=... -....+.++.+. + -...+|.+|..+
T Consensus 195 ~l~~~v~~~~~~~vg~~lD~~H~~~~~~~~~~~d~~~~l~~~~---~-~i~~vHlkD~~~ 250 (316)
T 3qxb_A 195 RLMADLDGRTEIPVRLLVDWGHALFEPLFGPEADMDHWMDLCQ---P-WIAAYHIQQTDG 250 (316)
T ss_dssp HHHHHHTTTSSSCEEEEEEHHHHTCHHHHGGGCSHHHHHHHHG---G-GEEEEEECBCCS
T ss_pred HHHHHHhccCCCCEEEEEEccchheecccccccCHHHHHHHHH---h-hheEEeeecCCC
Confidence 8888875545444443 45522211 012333333332 2 356899998654
No 141
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.50 E-value=1.3 Score=42.70 Aligned_cols=115 Identities=15% Similarity=0.095 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEeeeecC----------C----C----CC--CCCH-------HHHHHHHHHHHHCC
Q 018252 238 EDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC----------P----V----EG--AIPP-------SKVAYVAKELHDMG 290 (359)
Q Consensus 238 ~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~----------~----~----~~--r~~~-------e~l~~~a~~l~~~G 290 (359)
++.++.++++++.++++|-++...|.+. |- | . .. ..+. +.+.+.++.+.++|
T Consensus 79 d~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aG 157 (340)
T 3gr7_A 79 DDHIAGLRELVGLVKEHGAAIGIQLAHA-GRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAG 157 (340)
T ss_dssp TTHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccC-CCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3456778888889999999887777642 10 0 0 00 0232 34556666777889
Q ss_pred cCEEEEc-------------------CCCCCCc---HHHHHHHHHHHHHhCCCceEEEEeCC--------CCCcHHHHHH
Q 018252 291 CFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVPVEKLAVHLHD--------TYGQSLPNIL 340 (359)
Q Consensus 291 ad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p~~~L~~H~HN--------d~GLAlANal 340 (359)
.|.|.|- |-.|... +..+.++++++++.+ +.+|++-..- +....+.-+.
T Consensus 158 fDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~~g~~~~~~~~la~ 236 (340)
T 3gr7_A 158 FDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHPDGLTAKDYVPYAK 236 (340)
T ss_dssp CSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCSTTSCCGGGHHHHHH
T ss_pred CCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccCCCCCHHHHHHHHH
Confidence 9966653 4445432 344678999999988 4567765542 2334455566
Q ss_pred HHHHcCCCEEecee
Q 018252 341 ISLQVSPMHAKPCF 354 (359)
Q Consensus 341 aAv~AGa~~ID~tl 354 (359)
...++|+++|+++-
T Consensus 237 ~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 237 RMKEQGVDLVDVSS 250 (340)
T ss_dssp HHHHTTCCEEEEEC
T ss_pred HHHHcCCCEEEEec
Confidence 66789999999873
No 142
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=92.49 E-value=3.3 Score=40.04 Aligned_cols=136 Identities=14% Similarity=0.012 Sum_probs=80.3
Q ss_pred hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHH-hC--CCcEEEEEeeeecCCCCCCCCHHHHHHH
Q 018252 206 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK-VL--SIPVRGYVSCVVGCPVEGAIPPSKVAYV 282 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak-~~--G~~V~~~is~~fg~~~~~r~~~e~l~~~ 282 (359)
.++.+++.|+..+.++.. +.+.....|.+.++.++.+.+.++.++ +. |+.++.-++ |... .+.-....+++.
T Consensus 120 ~l~e~~~~GV~y~E~r~d--p~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~--~~r~-~~~~~~~~~~~~ 194 (371)
T 2pgf_A 120 AVFNKYKEGVVLMEFRYS--PTFVAFKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCI--GDTG-HEAANIKASADF 194 (371)
T ss_dssp HHHHHHHHTEEEEEEEEC--HHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEE--EEES-STTCCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEEEC--cccccccCCCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEE--ecCC-CCHHHHHHHHHH
Confidence 456667789887776552 333123456788888887777777654 46 776654443 3211 111223333443
Q ss_pred HHHHHHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCC-CcHH-HHHHHHHHc-CCCEEece
Q 018252 283 AKELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY-GQSL-PNILISLQV-SPMHAKPC 353 (359)
Q Consensus 283 a~~l~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~-GLAl-ANalaAv~A-Ga~~ID~t 353 (359)
+.. ..-++..|.++ +-.+ |..+.+.++..++. ++++.+|++-+. | +. .+...|+.. |+++|.=+
T Consensus 195 a~~-~~~~vvg~dl~g~e~~---~~~~~~~~~~A~~~--gl~~~~HagE~~~~-~~~~~i~~al~~lg~~ri~Hg 262 (371)
T 2pgf_A 195 CLK-HKADFVGFDHGGHEVD---LKEYKEIFDYVRES--GVPLSVHAGEDVTL-PNLNTLYSAIQVLKVERIGHG 262 (371)
T ss_dssp HHH-TTTTEEEEEEEESCCC---GGGGHHHHHHHHHT--TCCBEEEESCCTTS-SSSHHHHHHHHTSCCSEEEEC
T ss_pred HHh-CCCCEEEEecCCCccc---HHHHHHHHHHHHHc--CCcEEEeeCCCCCC-CchHHHHHHHhccCCCEEecc
Confidence 333 22233344443 2222 88888888877764 478999999773 3 23 567788886 99887543
No 143
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=92.48 E-value=5 Score=38.21 Aligned_cols=135 Identities=15% Similarity=0.210 Sum_probs=82.4
Q ss_pred HHHHHHcCCCEEEEe-cCCchH-HHHhhh-cCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIF-ASASEA-FSKSNI-NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 283 (359)
Q Consensus 207 ie~a~~aGv~~V~i~-~s~S~~-~~~~n~-~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a 283 (359)
...+-++|++-+.+. .+.+-. +-.-.. ..|.++.+..++.+.+.+. .+.|.+.+- +| + -+++.+.+.+
T Consensus 31 A~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~--~~PviaD~d--~G--y---g~~~~v~~tv 101 (302)
T 3fa4_A 31 ARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISP--STPVIADAD--TG--Y---GGPIMVARTT 101 (302)
T ss_dssp HHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTST--TSCEEEECT--TT--T---SSHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhcc--CCCEEEECC--CC--C---CCHHHHHHHH
Confidence 344455799988773 222222 111112 2467787777665543222 466654442 32 1 2678899999
Q ss_pred HHHHHCCcCEEEEcCCCC-----------CCcHHHHHHHHHHHHHhC----CCceEEEEeCC----CCCcHHHHHHHHHH
Q 018252 284 KELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVV----PVEKLAVHLHD----TYGQSLPNILISLQ 344 (359)
Q Consensus 284 ~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~----p~~~L~~H~HN----d~GLAlANalaAv~ 344 (359)
+.+.++|+..|.|-|.++ +...++..+-|++.++.. ++.-|-.-+-. .+--|+.-+.+-.+
T Consensus 102 ~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~e 181 (302)
T 3fa4_A 102 EQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAARD 181 (302)
T ss_dssp HHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHHHH
Confidence 999999999999999985 234566666666666532 44333333321 22336778888999
Q ss_pred cCCCEE
Q 018252 345 VSPMHA 350 (359)
Q Consensus 345 AGa~~I 350 (359)
||||.|
T Consensus 182 AGAD~i 187 (302)
T 3fa4_A 182 AGADVG 187 (302)
T ss_dssp TTCSEE
T ss_pred cCCCEE
Confidence 999986
No 144
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=92.47 E-value=1.7 Score=42.37 Aligned_cols=133 Identities=17% Similarity=0.070 Sum_probs=81.9
Q ss_pred HHHHHHcCCCEEEEecCC--------chHHHH--hhhcCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeeeecCCCC--C
Q 018252 207 FEAAIAAGAKEVAIFASA--------SEAFSK--SNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCVVGCPVE--G 272 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~--------S~~~~~--~n~~~t~~e~l~~i~~~i~~Ak~~-G~-~V~~~is~~fg~~~~--~ 272 (359)
.++|.++|.|-|.+-.+- |+..++ ..+|-+.++-.+.+.++++..|+. |. .|.+-++. +..... .
T Consensus 159 A~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~-~~~~~g~~~ 237 (362)
T 4ab4_A 159 AENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAP-RADAHDMGD 237 (362)
T ss_dssp HHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT-TCCSSSCCC
T ss_pred HHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeec-cccccccCC
Confidence 346677999998886553 233222 234667776666677777777664 32 45555552 110000 1
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-CCEEe
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS-PMHAK 351 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG-a~~ID 351 (359)
..+.+...++++.+.++|+|-|.+.... ..| ++++.+++.++. ++-.=+ |.....+..+++.| ||.|-
T Consensus 238 ~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~i-Pvi~~G----git~e~a~~~l~~g~aD~V~ 306 (362)
T 4ab4_A 238 ADRAETFTYVARELGKRGIAFICSRERE--ADD----SIGPLIKEAFGG-PYIVNE----RFDKASANAALASGKADAVA 306 (362)
T ss_dssp TTHHHHHHHHHHHHHHTTCSEEEEECCC--CTT----CCHHHHHHHHCS-CEEEES----SCCHHHHHHHHHTTSCSEEE
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEECCCC--CCH----HHHHHHHHHCCC-CEEEeC----CCCHHHHHHHHHcCCccEEE
Confidence 1235678999999999999988876532 112 467778887764 333222 22467888999998 88774
No 145
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=92.47 E-value=3.7 Score=38.84 Aligned_cols=171 Identities=11% Similarity=0.002 Sum_probs=99.3
Q ss_pred HHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCCh---------------HhHHHHHHcCCCEE
Q 018252 154 IRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNL---------------KGFEAAIAAGAKEV 218 (359)
Q Consensus 154 a~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~---------------~gie~a~~aGv~~V 218 (359)
+....+.|.+.||+-.- -.++.++-...+++.+++..++.+.+++|.. ++++.+.++|++.|
T Consensus 52 a~~A~~gGAdRIELc~~---l~~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGv 128 (287)
T 3iwp_A 52 AVNAERGGADRIELCSG---LSEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGL 128 (287)
T ss_dssp HHHHHHHTCSEEEECBC---GGGTCBCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhCCCEEEECCC---CCCCCCCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEE
Confidence 44567789999999641 0122333334566777766678888888622 36788899999998
Q ss_pred EEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC
Q 018252 219 AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298 (359)
Q Consensus 219 ~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~D 298 (359)
.+-+=..+.. .. +++++++++.++. +.+.+ -.+|.. -.+|. +..+.+.++|+++|--.
T Consensus 129 VfG~L~~dg~------iD----~~~~~~Li~~a~~--l~vTF--HRAFD~----~~d~~---~Ale~Li~lGvdrILTS- 186 (287)
T 3iwp_A 129 VFGALTEDGH------ID----KELCMSLMAICRP--LPVTF--HRAFDM----VHDPM---AALETLLTLGFERVLTS- 186 (287)
T ss_dssp EECCBCTTSC------BC----HHHHHHHHHHHTT--SCEEE--CGGGGG----CSCHH---HHHHHHHHHTCSEEEEC-
T ss_pred EEeeeCCCCC------cC----HHHHHHHHHHcCC--CcEEE--ECchhc----cCCHH---HHHHHHHHcCCCEEECC-
Confidence 8854222210 11 3456677777764 44422 123321 12443 46677778899988752
Q ss_pred CCCCCcHHHHHHHHHHHHHhC-CCceEEEEeCCCCCcHHHHHHHHHH-cCCCEEecee
Q 018252 299 TIGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILISLQ-VSPMHAKPCF 354 (359)
Q Consensus 299 T~G~~~P~~v~~lv~~l~~~~-p~~~L~~H~HNd~GLAlANalaAv~-AGa~~ID~tl 354 (359)
-|..+..+=.+.++.+.+.. +.++|-. .=|.-..|+-.-++ +|++.+|.|-
T Consensus 187 -G~~~~a~~Gl~~Lk~Lv~~a~~rI~Ima----GGGV~~~Ni~~l~~~tG~~~~H~S~ 239 (287)
T 3iwp_A 187 -GCDSSALEGLPLIKRLIEQAKGRIVVMP----GGGITDRNLQRILEGSGATEFHCSA 239 (287)
T ss_dssp -TTSSSTTTTHHHHHHHHHHHTTSSEEEE----CTTCCTTTHHHHHHHHCCSEEEECC
T ss_pred -CCCCChHHhHHHHHHHHHHhCCCCEEEE----CCCcCHHHHHHHHHhhCCCEEeECc
Confidence 22222223233444444433 2244443 34566677777666 9999999874
No 146
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=92.43 E-value=2.4 Score=38.04 Aligned_cols=178 Identities=16% Similarity=0.093 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEE--EeCChHhHHHHHHcCCCEEEEecCCc
Q 018252 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPV--LTPNLKGFEAAIAAGAKEVAIFASAS 225 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~--l~~n~~gie~a~~aGv~~V~i~~s~S 225 (359)
.+-.++++.+.++|++.|.+--..... .......+.++.+++..++.+.+ .+.+.++++.++++|++.|.+-..
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~--~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~-- 105 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASV--EKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTA-- 105 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSS--SHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHH--
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhh--cCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChH--
Confidence 356888999999999998875321110 00011122334444433444433 335678899999999999877321
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCC-cEEEEEee---------eecCCCCCCCCHHHHHHHHHHHHHCCcCEEE
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVLSI-PVRGYVSC---------VVGCPVEGAIPPSKVAYVAKELHDMGCFEIS 295 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~-~V~~~is~---------~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~ 295 (359)
... + .+.+.++++ ..|. .+...+.+ .+-... ..+.....+.++.+.++|++.|.
T Consensus 106 -~l~--~--------p~~~~~~~~---~~g~~~i~~~~~~~~~~g~~~v~~~g~~--~~~~~~~~e~~~~~~~~G~~~i~ 169 (253)
T 1thf_D 106 -AVE--N--------PSLITQIAQ---TFGSQAVVVAIDAKRVDGEFMVFTYSGK--KNTGILLRDWVVEVEKRGAGEIL 169 (253)
T ss_dssp -HHH--C--------THHHHHHHH---HHCGGGEEEEEEEEEETTEEEEEETTTT--EEEEEEHHHHHHHHHHTTCSEEE
T ss_pred -HHh--C--------hHHHHHHHH---HcCCCcEEEEEEEEccCCcEEEEECCCc--cccCCCHHHHHHHHHHCCCCEEE
Confidence 110 0 111223332 3332 12222221 010000 00001245677888889999888
Q ss_pred EcCC--CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEEe
Q 018252 296 LGDT--IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHAK 351 (359)
Q Consensus 296 L~DT--~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~ID 351 (359)
+-++ .|...... .++++.+++..+ +++-.= -|.. ..++..+.++||+.|=
T Consensus 170 ~~~~~~~g~~~g~~-~~~~~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~Gadgv~ 222 (253)
T 1thf_D 170 LTSIDRDGTKSGYD-TEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGADAAL 222 (253)
T ss_dssp EEETTTTTSCSCCC-HHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHTTCSEEE
T ss_pred EEeccCCCCCCCCC-HHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCChHHH
Confidence 7643 24332222 345666666543 444442 4555 4788888899998764
No 147
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=92.43 E-value=0.85 Score=44.58 Aligned_cols=71 Identities=10% Similarity=0.005 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEE-EeCCCCCcHHHHHHHHHHcCCCEEecee
Q 018252 277 SKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 277 e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H~HNd~GLAlANalaAv~AGa~~ID~tl 354 (359)
+...+.++++.++|+|.|.+-=+.| .+..+.+.++.+++.+|+++|.. -. .....+..++++|||.|.+++
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G--~~~~~~e~I~~ir~~~~~~~Vi~G~V-----~T~e~A~~a~~aGaD~I~Vg~ 170 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHA--HAKYVGKTLKSLRQLLGSRCIMAGNV-----ATYAGADYLASCGADIIKAGI 170 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCC--SSHHHHHHHHHHHHHHTTCEEEEEEE-----CSHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCC--CcHhHHHHHHHHHHhcCCCeEEEcCc-----CCHHHHHHHHHcCCCEEEEcC
Confidence 5677889999999999776622334 46677889999999988766665 22 345778999999999999753
No 148
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=92.38 E-value=2.3 Score=40.67 Aligned_cols=134 Identities=11% Similarity=0.041 Sum_probs=86.5
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHH-hCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK-VLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 285 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak-~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~ 285 (359)
++.+.+.|+..+-++.. +.. ...-|.+.++.++.+.+.++.++ +.|+.++.-++ +. -..+++...+.++.
T Consensus 84 ~~~~~~dgV~y~Eir~~--P~~-~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~--~~----R~~~~~~a~~~~~~ 154 (326)
T 3pao_A 84 LQKCKAQNVVHVEPFFD--PQT-HTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILS--FL----RHLSEEQAQKTLDQ 154 (326)
T ss_dssp HHHHHHTTEEEECCEEC--HHH-HHTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEE--EE----TTSCHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEEEEC--hHH-hccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEE--eC----CCCCHHHHHHHHHH
Confidence 34555667776555432 222 23457889999998888888775 46876654443 21 12467776666666
Q ss_pred HHHC--CcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHH-cCCCEEece
Q 018252 286 LHDM--GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ-VSPMHAKPC 353 (359)
Q Consensus 286 l~~~--Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~-AGa~~ID~t 353 (359)
+.++ ++..|.|+=.=....|..+.+.++..++. ++++.+|+.-+.+ ..+...|+. .|+++|+=.
T Consensus 155 a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~--gl~~~~HagE~~~--~~~i~~al~~lg~~rigHg 221 (326)
T 3pao_A 155 ALPFRDAFIAVGLDSSEVGHPPSKFQRVFDRARSE--GFLTVAHAGEEGP--PEYIWEALDLLKVERIDHG 221 (326)
T ss_dssp HGGGGGGCSEEEEESCCTTCCGGGGHHHHHHHHHT--TCEECEEESSSSC--HHHHHHHHHTTCCSSEEEC
T ss_pred HhhccccceeeCCCCCCCCCCHHHHHHHHHHHHHc--CCceeeecCCCCC--HHHHHHHHhcCCCceeeee
Confidence 6543 45566663222345688888888877663 4788899987754 467788995 899887533
No 149
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=92.33 E-value=3.3 Score=39.31 Aligned_cols=133 Identities=14% Similarity=0.209 Sum_probs=83.0
Q ss_pred HHHHHcCCCEEEEec-CCc-hHHHHhhhc-CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 208 EAAIAAGAKEVAIFA-SAS-EAFSKSNIN-CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 208 e~a~~aGv~~V~i~~-s~S-~~~~~~n~~-~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
..+-++|++-|.+.- +.+ -.+-.-..+ .|.++.+..++.+.+. ..+.|.+.+- || . -+++.+.+.++
T Consensus 36 ~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~---~~~PviaD~d--~G----y-g~~~~v~~~v~ 105 (298)
T 3eoo_A 36 KMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNA---TNLPLLVDID--TG----W-GGAFNIARTIR 105 (298)
T ss_dssp HHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHH---CCSCEEEECT--TC----S-SSHHHHHHHHH
T ss_pred HHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhh---cCCeEEEECC--CC----C-CCHHHHHHHHH
Confidence 344457999887742 222 111111112 4788888877777654 3466644332 22 1 27889999999
Q ss_pred HHHHCCcCEEEEcCCCC-----------CCcHHHHHHHHHHHHHhC--CCceEEEEeCCC----CCcHHHHHHHHHHcCC
Q 018252 285 ELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVV--PVEKLAVHLHDT----YGQSLPNILISLQVSP 347 (359)
Q Consensus 285 ~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~--p~~~L~~H~HNd----~GLAlANalaAv~AGa 347 (359)
.+.++|+..|.|-|.++ +...++..+.|++.++.. ++.-|-.-+-.- +--++.-+.+-.+|||
T Consensus 106 ~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGA 185 (298)
T 3eoo_A 106 SFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGA 185 (298)
T ss_dssp HHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCC
Confidence 99999999999999886 334556666666666654 333333333221 1226778888999999
Q ss_pred CEE
Q 018252 348 MHA 350 (359)
Q Consensus 348 ~~I 350 (359)
|.|
T Consensus 186 D~i 188 (298)
T 3eoo_A 186 DMI 188 (298)
T ss_dssp SEE
T ss_pred CEE
Confidence 976
No 150
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=92.30 E-value=1.5 Score=42.79 Aligned_cols=132 Identities=19% Similarity=0.128 Sum_probs=80.4
Q ss_pred HHHHHcCCCEEEEecCC--------chHHHH--hhhcCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeeeecCCCC--CC
Q 018252 208 EAAIAAGAKEVAIFASA--------SEAFSK--SNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCVVGCPVE--GA 273 (359)
Q Consensus 208 e~a~~aGv~~V~i~~s~--------S~~~~~--~n~~~t~~e~l~~i~~~i~~Ak~~-G~-~V~~~is~~fg~~~~--~r 273 (359)
++|.++|.|.|.+-.+- |+..++ ..+|-+.++-.+.+.++++..|+. |. .|.+-|+. +..... ..
T Consensus 168 ~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~-~~~~~g~~~~ 246 (361)
T 3gka_A 168 ENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAP-RGDAHTMGDS 246 (361)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECT-TCCSSSCCCS
T ss_pred HHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEeccc-ccccCCCCCC
Confidence 46677899998886543 232222 124566666666666666666654 32 45555552 111000 11
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-CCEEe
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS-PMHAK 351 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG-a~~ID 351 (359)
.+.+...++++.+.++|+|-|.+.... ..| ++++.+++.++. ++-.=. |.....+..+++.| ||.|-
T Consensus 247 ~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~i-Pvi~~G----git~e~a~~~l~~G~aD~V~ 314 (361)
T 3gka_A 247 DPAATFGHVARELGRRRIAFLFARESF--GGD----AIGQQLKAAFGG-PFIVNE----NFTLDSAQAALDAGQADAVA 314 (361)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC--STT----CCHHHHHHHHCS-CEEEES----SCCHHHHHHHHHTTSCSEEE
T ss_pred CcHHHHHHHHHHHHHcCCCEEEECCCC--CCH----HHHHHHHHHcCC-CEEEeC----CCCHHHHHHHHHcCCccEEE
Confidence 235678999999999999988886532 122 567778887764 333222 22467888999998 88774
No 151
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=92.24 E-value=4.4 Score=35.16 Aligned_cols=156 Identities=14% Similarity=0.063 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh---cCCCeEEEEeCChHhHHHHHHcCCCEEEEecCCc
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD---LEGARLPVLTPNLKGFEAAIAAGAKEVAIFASAS 225 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~---~~~~~l~~l~~n~~gie~a~~aGv~~V~i~~s~S 225 (359)
+-.+.++.+.+.|++.|++..+... ..+..+..+.+++ ..++.+.+ . ..++.+.++|++.|++....-
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~~~-----~~~~~~~~~~l~~~~~~~~v~v~v--~--~~~~~a~~~gad~v~l~~~~~ 97 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKNAP-----TREMYEIGKTLRQLTREYDALFFV--D--DRVDVALAVDADGVQLGPEDM 97 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCSCC-----HHHHHHHHHHHHHHHHHTTCEEEE--E--SCHHHHHHHTCSEEEECTTSC
T ss_pred hHHHHHHHHHHCCCCEEEECCCCCC-----HHHHHHHHHHHHHHHHHcCCeEEE--c--ChHHHHHHcCCCEEEECCccC
Confidence 4567888999999999999853211 0111222222222 12343333 1 567889999999998742110
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE---cCCCCC
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL---GDTIGV 302 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L---~DT~G~ 302 (359)
.. +.++. .+ .++.+. ++ ..+++++ +.+.+.|+|.|.+ -+|.+.
T Consensus 98 ----------~~----~~~~~----~~-~~~~~~--v~---------~~t~~e~----~~~~~~g~d~i~~~~~~~~~~~ 143 (215)
T 1xi3_A 98 ----------PI----EVAKE----IA-PNLIIG--AS---------VYSLEEA----LEAEKKGADYLGAGSVFPTKTK 143 (215)
T ss_dssp ----------CH----HHHHH----HC-TTSEEE--EE---------ESSHHHH----HHHHHHTCSEEEEECSSCC---
T ss_pred ----------CH----HHHHH----hC-CCCEEE--Ee---------cCCHHHH----HHHHhcCCCEEEEcCCccCCCC
Confidence 11 11111 12 344332 22 1255443 3356679998875 233211
Q ss_pred --CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 303 --GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 303 --~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
..|.. .+.++.+++..+ +++.. .-|....|+..++++|++.|.+.
T Consensus 144 ~~~~~~~-~~~l~~l~~~~~-~pvia----~GGI~~~nv~~~~~~Ga~gv~vg 190 (215)
T 1xi3_A 144 EDARVIG-LEGLRKIVESVK-IPVVA----IGGINKDNAREVLKTGVDGIAVI 190 (215)
T ss_dssp -CCCCCH-HHHHHHHHHHCS-SCEEE----ESSCCTTTHHHHHTTTCSEEEES
T ss_pred CCCCCcC-HHHHHHHHHhCC-CCEEE----ECCcCHHHHHHHHHcCCCEEEEh
Confidence 12222 345566666542 45544 34677778888899999999865
No 152
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=92.21 E-value=2 Score=40.41 Aligned_cols=120 Identities=14% Similarity=0.095 Sum_probs=74.1
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 30 v~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~A 94 (294)
T 3b4u_A 30 ARRCLSNGCDSVTLFGTTGEGC-----SVGSRERQAILSSFIAAGIA-PSRIVTGV---------LVDSIEDAADQSAEA 94 (294)
T ss_dssp HHHHHHTTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHTTCC-GGGEEEEE---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCccHHHHHHHHHHH
Confidence 5556678888888877777754 34566655555555544331 24453322 234667788888888
Q ss_pred HHCCcCEEEEcCCCC-C-CcHHHHHHHHHHHHHhCC--CceEEE-E----eCCCCCcHHHHHHH
Q 018252 287 HDMGCFEISLGDTIG-V-GTPGTVVPMLEAVMAVVP--VEKLAV-H----LHDTYGQSLPNILI 341 (359)
Q Consensus 287 ~~~Gad~I~L~DT~G-~-~~P~~v~~lv~~l~~~~p--~~~L~~-H----~HNd~GLAlANala 341 (359)
.++|+|.+-+.=..= - .+++.+.+.++++.+..| ++||-+ | .+.++...+---|+
T Consensus 95 ~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 95 LNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp HHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 888988766543322 2 367888888888888774 456555 3 35555555444443
No 153
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=92.21 E-value=0.82 Score=46.69 Aligned_cols=141 Identities=16% Similarity=-0.004 Sum_probs=87.4
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhC-C--CcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-S--IPVRGYVSCVVGCPVEGAIPPSKVAYVA 283 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~-G--~~V~~~is~~fg~~~~~r~~~e~l~~~a 283 (359)
++.+.+-|+..+-+...-++.+....-+.+.++.++.+.+.++.+++. | +.++.-++ +. -..+++...+.+
T Consensus 206 l~d~a~dgV~Y~ElR~~f~p~~~~~g~~l~~~~vv~~v~~~~~~~~~~~~~fI~~rlI~~--~~----R~~~~e~a~e~l 279 (508)
T 3lgd_A 206 MQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKFVETHPEFIGIKIIYS--DH----RSKDVAVIAESI 279 (508)
T ss_dssp HHHHHHTTEEEEEEEECCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHCTTCCEEEEEEE--EE----TTSCHHHHHHHH
T ss_pred HHHHHHcCceEEEEeecCchHhhccCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEEE--ec----CCCCHHHHHHHH
Confidence 455556788866664322233322223468899999999988887754 4 55554333 21 124677666666
Q ss_pred HHHHHC------CcCEEEEcCC--CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH---HHHHHHHHHcCCCEEec
Q 018252 284 KELHDM------GCFEISLGDT--IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS---LPNILISLQVSPMHAKP 352 (359)
Q Consensus 284 ~~l~~~------Gad~I~L~DT--~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA---lANalaAv~AGa~~ID~ 352 (359)
+.+.++ ++--|.|+-. .|. .|..+.+.+...++.-.++++.+|+--..+.| ..|...|+..|+++|+=
T Consensus 280 ~~a~~~~~~~~~~VvG~DLaG~E~~g~-p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~Al~Lga~RIgH 358 (508)
T 3lgd_A 280 RMAMGLRIKFPTVVAGFDLVGHEDTGH-SLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDALMLNTTRIGH 358 (508)
T ss_dssp HHHHHHHHHCTTTEEEEEEESCTTTSC-CTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHHHHHTTCSSEEE
T ss_pred HHHHHHHhhCCCceEEeccCCCCCCCC-CHHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHHHHhcCCceeee
Confidence 555443 3456666433 233 46678888776444445688999998876555 45888888999999864
Q ss_pred ee
Q 018252 353 CF 354 (359)
Q Consensus 353 tl 354 (359)
.+
T Consensus 359 Gv 360 (508)
T 3lgd_A 359 GF 360 (508)
T ss_dssp CT
T ss_pred eE
Confidence 43
No 154
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=92.16 E-value=1.9 Score=40.87 Aligned_cols=118 Identities=12% Similarity=0.053 Sum_probs=73.9
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-|.+.-++.|.+ ..|.+|-.+-++.+++.+ ..++|.+.+ +..+.++.+++++.+
T Consensus 35 v~~li~~Gv~Gl~v~GtTGE~~-----~Lt~~Er~~v~~~~v~~~--grvpViaGv---------g~~~t~~ai~la~~A 98 (313)
T 3dz1_A 35 TDFYAEVGCEGVTVLGILGEAP-----KLDAAEAEAVATRFIKRA--KSMQVIVGV---------SAPGFAAMRRLARLS 98 (313)
T ss_dssp HHHHHHTTCSEEEESTGGGTGG-----GSCHHHHHHHHHHHHHHC--TTSEEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEeCccCcChh-----hCCHHHHHHHHHHHHHHc--CCCcEEEec---------CCCCHHHHHHHHHHH
Confidence 4556678888887777766654 345666666666666655 234443211 234667888888888
Q ss_pred HHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCC-CceEEE-E----eCCCCCcHHHHHH
Q 018252 287 HDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAV-H----LHDTYGQSLPNIL 340 (359)
Q Consensus 287 ~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~~L~~-H----~HNd~GLAlANal 340 (359)
.++|+|.+-+.=..-..+++.+.+.++++.+..+ ++||-+ | .+.++...+-.-|
T Consensus 99 ~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~L 158 (313)
T 3dz1_A 99 MDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQI 158 (313)
T ss_dssp HHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHH
T ss_pred HHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHH
Confidence 8888887666544445677888888888887765 345544 3 3445554443333
No 155
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=92.10 E-value=4 Score=36.90 Aligned_cols=178 Identities=10% Similarity=-0.006 Sum_probs=92.6
Q ss_pred CCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC-
Q 018252 124 PRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP- 202 (359)
Q Consensus 124 p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~- 202 (359)
+-++-+...++++ .+ -.+.++.+.++|++.||+..... ..+.+++.+.+++ .++++.++..
T Consensus 25 ~mklg~~~~~~~~--------~~---~~~~l~~~~~~G~~~vEl~~~~~------~~~~~~~~~~l~~-~gl~v~~~~~~ 86 (287)
T 3kws_A 25 ELKLSFQEGIAPG--------ES---LNEKLDFMEKLGVVGFEPGGGGL------AGRVNEIKQALNG-RNIKVSAICAG 86 (287)
T ss_dssp CCEEEEETTSSCC--------SS---HHHHHHHHHHTTCCEEECBSTTC------GGGHHHHHHHHTT-SSCEECEEECC
T ss_pred eeeEEEEecccCC--------CC---HHHHHHHHHHcCCCEEEecCCch------HHHHHHHHHHHHH-cCCeEEEEecC
Confidence 3345555666654 23 34567777889999999987421 1345555555543 3555544321
Q ss_pred --------Ch-----------HhHHHHHHcCCCEEEEecCCchHHHHh--hhcCCHHHHHHHHHHHHHHHHhCCCcEEEE
Q 018252 203 --------NL-----------KGFEAAIAAGAKEVAIFASASEAFSKS--NINCSIEDSLVRYRAVAHAAKVLSIPVRGY 261 (359)
Q Consensus 203 --------n~-----------~gie~a~~aGv~~V~i~~s~S~~~~~~--n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~ 261 (359)
+. +.++.|.+.|++.|.+...... +... ......+...+.+..+.++|+++|+++.
T Consensus 87 ~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~-~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~-- 163 (287)
T 3kws_A 87 FKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNG-QVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVI-- 163 (287)
T ss_dssp CCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTT-CCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEE--
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCC-cCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE--
Confidence 11 1244555679998887532110 0000 0001235567778889999999998763
Q ss_pred EeeeecCCCCC--CCCHHHHHHHHHHHHHCCcCEEE-EcCCCCCCc-HHHHHHHHHHHHHhCCCceEEEEeCCC
Q 018252 262 VSCVVGCPVEG--AIPPSKVAYVAKELHDMGCFEIS-LGDTIGVGT-PGTVVPMLEAVMAVVPVEKLAVHLHDT 331 (359)
Q Consensus 262 is~~fg~~~~~--r~~~e~l~~~a~~l~~~Gad~I~-L~DT~G~~~-P~~v~~lv~~l~~~~p~~~L~~H~HNd 331 (359)
+. .-+++.+ -.+++.+.++++.+ +.+.+. .-||.=... -.+..+. +++..+ -...+|++|.
T Consensus 164 lE--~~~~~~~~~~~~~~~~~~ll~~v---~~~~vg~~~D~~h~~~~g~d~~~~---l~~~~~-~i~~vHlkD~ 228 (287)
T 3kws_A 164 FE--PLNRKECFYLRQVADAASLCRDI---NNPGVRCMGDFWHMTWEETSDMGA---FISGGE-YLQHVHVASR 228 (287)
T ss_dssp EC--CCCTTTCSSCCCHHHHHHHHHHH---CCTTEEEEEEHHHHHHHCSCHHHH---HHHHGG-GEEEEEECCT
T ss_pred EE--ecCcccCcccCCHHHHHHHHHHc---CCCCeeEEeehHHHHhcCCCHHHH---HHHhhh-hEEEEEeCCC
Confidence 22 1121112 24777777777765 322222 234321110 0112222 333223 3578899987
No 156
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=92.08 E-value=3.9 Score=39.84 Aligned_cols=110 Identities=8% Similarity=0.079 Sum_probs=70.1
Q ss_pred cCCHHHHHHHHHHHHHHHHh-CCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHH---CCcCEEEEcCCCCCCcH---H
Q 018252 234 NCSIEDSLVRYRAVAHAAKV-LSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHD---MGCFEISLGDTIGVGTP---G 306 (359)
Q Consensus 234 ~~t~~e~l~~i~~~i~~Ak~-~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~---~Gad~I~L~DT~G~~~P---~ 306 (359)
|.+.++.++.+.+.++.+++ .|+.++.-+++. |..++...+.++.+.+ -|+--|.|+=.=....| .
T Consensus 120 gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~~-------R~~~~~a~e~~~la~~~~~~~vvG~dL~g~E~~~~~~~~~ 192 (367)
T 3iar_A 120 DLTPDEVVALVGQGLQEGERDFGVKARSILCCM-------RHQPNWSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLP 192 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE-------TTCGGGHHHHHHHHHHTTTTTEEEEEEESCTTSTTGGGCH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEeC-------CCCCHHHHHHHHHHHhhCCCCEEEEcCCCcccCCCcchHH
Confidence 67899999988888887754 588876555421 2222223344444443 35555666432223344 6
Q ss_pred HHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHH-cCCCEEecee
Q 018252 307 TVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ-VSPMHAKPCF 354 (359)
Q Consensus 307 ~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~-AGa~~ID~tl 354 (359)
.+.+.++..++. ++++.+|+.-+.+. .+...|+. .|+++|+=.+
T Consensus 193 ~f~~~f~~A~~~--gl~~~~HagE~~~~--~~i~~al~~lg~~RIgHgv 237 (367)
T 3iar_A 193 GHVQAYQEAVKS--GIHRTVHAGEVGSA--EVVKEAVDILKTERLGHGY 237 (367)
T ss_dssp HHHHHHHHHHHH--TCEEEEEESSSSCH--HHHHHHHHTSCCSEEEECG
T ss_pred HHHHHHHHHHHc--CCeeEEecCCcCCh--HHHHHHHHccCCceeeeee
Confidence 778888766654 47899999887663 57778894 8999986443
No 157
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=92.07 E-value=1.4 Score=45.47 Aligned_cols=188 Identities=13% Similarity=0.072 Sum_probs=109.5
Q ss_pred EeCC----CcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhh---hcCCCeEEEEeC
Q 018252 130 VEVG----PRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR---DLEGARLPVLTP 202 (359)
Q Consensus 130 ~D~T----LRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~---~~~~~~l~~l~~ 202 (359)
+.+| ++||.+. .+.+.-++.++.+.+.|.++|++|.... .....+++.+.+. ...++.++.=+.
T Consensus 322 ~N~Tg~dsf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIgpg~~-----~v~~~ee~~rvv~~i~~~~~vpisIDT~ 392 (566)
T 1q7z_A 322 INPAGRKKLWAEMQK----GNEEIVIKEAKTQVEKGAEVLDVNFGIE-----SQIDVRYVEKIVQTLPYVSNVPLSLDIQ 392 (566)
T ss_dssp ECCTTCHHHHHHHHT----TCCHHHHHHHHHHHHTTCSEEEEECSSG-----GGSCHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred ecCCCChhHHHHhhc----CCHHHHHHHHHHHHHCCCCEEEECCCCC-----CCCHHHHHHHHHHHHHhhCCceEEEeCC
Confidence 4466 6777544 4568899999999999999999994221 1234455444443 334666766677
Q ss_pred ChHhHHHHHHc--CCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCC----H
Q 018252 203 NLKGFEAAIAA--GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP----P 276 (359)
Q Consensus 203 n~~gie~a~~a--Gv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~----~ 276 (359)
+.+-++.++++ |.+.|+=.-.. + +++.++++.++++|..+. ++ .+.. . ...+ .
T Consensus 393 ~~~v~eaal~~~~G~~iINdis~~--------------~--~~~~~~~~~~~~~g~~vV--~m-~~~~-~-~p~t~~~~~ 451 (566)
T 1q7z_A 393 NVDLTERALRAYPGRSLFNSAKVD--------------E--EELEMKINLLKKYGGTLI--VL-LMGK-D-VPKSFEERK 451 (566)
T ss_dssp CHHHHHHHHHHCSSCCEEEEEESC--------------H--HHHHHHHHHHHHHCCEEE--EE-SCSS-S-CCCSHHHHH
T ss_pred CHHHHHHHHHhcCCCCEEEECCcc--------------h--hhHHHHHHHHHHhCCeEE--EE-eCCC-C-CcCCHHHHH
Confidence 88889999998 98876543221 0 234466777788888652 22 2211 0 1112 4
Q ss_pred HHHHHHHHHHHHCCc-CEEEE---cCCCCCCcHHHHHHHHHHHHHh--CCCceEEEEeCC-CC------CcHHHHHHHHH
Q 018252 277 SKVAYVAKELHDMGC-FEISL---GDTIGVGTPGTVVPMLEAVMAV--VPVEKLAVHLHD-TY------GQSLPNILISL 343 (359)
Q Consensus 277 e~l~~~a~~l~~~Ga-d~I~L---~DT~G~~~P~~v~~lv~~l~~~--~p~~~L~~H~HN-d~------GLAlANalaAv 343 (359)
+++.+.++.+.++|+ +.|.| ..++|.+. .-.++++.++.- . +.++-+=..| .+ .+.-.-+..|+
T Consensus 452 ~~l~~~~~~a~~~Gi~~~IilDPg~~~igfgk--~~~~~l~~~~~~~~~-g~p~l~G~Snksf~~~~~~~l~~t~a~~a~ 528 (566)
T 1q7z_A 452 EYFEKALKILERHDFSDRVIFDPGVLPLGAEG--KPVEVLKTIEFISSK-GFNTTVGLSNLSFGLPDRSYYNTAFLVLGI 528 (566)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEECCCCCTTTTC--CHHHHHHHHHHHHHT-TCEECCBGGGGSTTSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCcEEEeCCCCcccCcH--HHHHHHHHHHHHHhC-CCCEEEEeCcccccCCHHHHHHHHHHHHHH
Confidence 466667778889999 55554 23446666 444444444421 1 2232221111 12 22223336678
Q ss_pred HcCCCEE
Q 018252 344 QVSPMHA 350 (359)
Q Consensus 344 ~AGa~~I 350 (359)
++|++.+
T Consensus 529 ~~G~~i~ 535 (566)
T 1q7z_A 529 SKGLSSA 535 (566)
T ss_dssp HTTCCEE
T ss_pred HcCCCEE
Confidence 9999876
No 158
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=91.99 E-value=4.2 Score=40.42 Aligned_cols=80 Identities=6% Similarity=-0.049 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCC--------------CcH---HHHHHHHHHHHHhCC-CceEEEEeCCCCCcH
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGV--------------GTP---GTVVPMLEAVMAVVP-VEKLAVHLHDTYGQS 335 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~--------------~~P---~~v~~lv~~l~~~~p-~~~L~~H~HNd~GLA 335 (359)
.+.+.+.++++.+.++|+|-|.+-.|.+. .-| ....+++..+++.++ .++|-.=+==. .
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~---s 356 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIF---S 356 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCC---S
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCC---C
Confidence 36678999999999999999999987642 111 223477888888774 34544322111 1
Q ss_pred HHHHHHHHHcCCCEEeceeee
Q 018252 336 LPNILISLQVSPMHAKPCFTF 356 (359)
Q Consensus 336 lANalaAv~AGa~~ID~tl~~ 356 (359)
-.-+++++.+||+.|-..-.+
T Consensus 357 ~eDa~e~l~aGAd~VqIgra~ 377 (415)
T 3i65_A 357 GLDALEKIEAGASVCQLYSCL 377 (415)
T ss_dssp HHHHHHHHHHTEEEEEESHHH
T ss_pred HHHHHHHHHcCCCEEEEcHHH
Confidence 357788889999988765433
No 159
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=91.95 E-value=0.69 Score=43.87 Aligned_cols=81 Identities=20% Similarity=0.233 Sum_probs=69.8
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhC-CCceEEEEe-CCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVV-PVEKLAVHL-HDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~L~~H~-HNd~GLAlANalaAv~AG 346 (359)
+..|.+-+.++++.+.+.|++-|.++-|.|= ++.++-.++++.+.+.. +.+++-+|. +|+..-++..+..|-++|
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 110 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEG 110 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999999996 46888888888888865 346777776 788899999999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.|=.
T Consensus 111 adavlv 116 (304)
T 3l21_A 111 AHGLLV 116 (304)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 988754
No 160
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=91.94 E-value=3.4 Score=38.86 Aligned_cols=120 Identities=13% Similarity=0.040 Sum_probs=81.1
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+....++|.+.+ +..+.++.+++++.+
T Consensus 34 v~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ai~la~~a 99 (301)
T 3m5v_A 34 IKRQIENGIDAVVPVGTTGESA-----TLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHEAVGLAKFA 99 (301)
T ss_dssp HHHHHHTTCCEEECSSTTTTGG-----GSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHHHHHHHHHH
Confidence 5566778999988887777764 34677777777777776654235553222 245678889999999
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE-E----eCCCCCcHHHHHHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV-H----LHDTYGQSLPNILI 341 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H----~HNd~GLAlANala 341 (359)
.++|+|.+-+. =-.--.+++.+.+.++++.+..+ +||-+ | .+.++...+-.-|+
T Consensus 100 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P~~tg~~l~~~~~~~La 159 (301)
T 3m5v_A 100 KEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVD-IPVLLYNVPGRTGCEISTDTIIKLF 159 (301)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCHHHHHHHH
Confidence 99999975554 33344577889999998888874 45554 3 35666665554444
No 161
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=91.88 E-value=3.3 Score=39.89 Aligned_cols=138 Identities=20% Similarity=0.057 Sum_probs=86.3
Q ss_pred HHHHHHcCCCEEEEecC--------CchHHH--HhhhcCCHHHHHHHHHHHHHHHHhC---CCcEEEEEeeeecCCCCCC
Q 018252 207 FEAAIAAGAKEVAIFAS--------ASEAFS--KSNINCSIEDSLVRYRAVAHAAKVL---SIPVRGYVSCVVGCPVEGA 273 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s--------~S~~~~--~~n~~~t~~e~l~~i~~~i~~Ak~~---G~~V~~~is~~fg~~~~~r 273 (359)
.++|.++|.|-|.+-.. .|+..+ ...+|-+.++-.+.+.++++.+|+. ++.|.+-|+.. .. ..+.
T Consensus 149 A~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~-~~-~~~g 226 (343)
T 3kru_A 149 AKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSAD-DY-MEGG 226 (343)
T ss_dssp HHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECC-CS-STTS
T ss_pred HhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeech-hh-hccC
Confidence 35667789998777532 122221 2235667777777778888888876 34566666642 11 1234
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEc--CCCCC---CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-C
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLG--DTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS-P 347 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~--DT~G~---~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG-a 347 (359)
.+.+...++++.+.++ +|-|.+. .+... ..|....++++.+++.++ ++|..=+-- .....+..+++.| |
T Consensus 227 ~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~-iPVi~~Ggi---~t~e~Ae~~l~~G~a 301 (343)
T 3kru_A 227 INIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCN-IKTSAVGLI---TTQELAEEILSNERA 301 (343)
T ss_dssp CCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHT-CEEEEESSC---CCHHHHHHHHHTTSC
T ss_pred ccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcC-cccceeeee---eHHHHHHHHHhchhh
Confidence 6789999999999999 9988873 22110 123334567788888775 455432211 1246677889998 8
Q ss_pred CEEe
Q 018252 348 MHAK 351 (359)
Q Consensus 348 ~~ID 351 (359)
|.|-
T Consensus 302 D~V~ 305 (343)
T 3kru_A 302 DLVA 305 (343)
T ss_dssp SEEE
T ss_pred HHHH
Confidence 8774
No 162
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=91.86 E-value=3.1 Score=37.35 Aligned_cols=168 Identities=12% Similarity=0.089 Sum_probs=83.2
Q ss_pred HHHHHHHhCCCCEEEEeccCCCC-Cc-CCC--CCHHHHHHHhhhcCCCe---EEEEeC--------Ch-----------H
Q 018252 152 ELIRRLVSSGLPVVEATSFVSPK-WV-PQL--ADARDVMEAVRDLEGAR---LPVLTP--------NL-----------K 205 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG~fvspk-~v-Pq~--~D~~ev~~~l~~~~~~~---l~~l~~--------n~-----------~ 205 (359)
+.++.+.++|++.||+.. ..|. +. +.+ .+.+++.+.+++ .+++ +.+..+ +. +
T Consensus 16 ~~l~~~~~~G~~~iEl~~-~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~~ 93 (287)
T 2x7v_A 16 RVPQDTVNIGGNSFQIFP-HNARSWSAKLPSDEAATKFKREMKK-HGIDWENAFCHSGYLINLASPKDDIWQKSVELLKK 93 (287)
T ss_dssp GHHHHHHHTTCSEEEECS-CCCSSSCCCCCCHHHHHHHHHHHHH-HTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeC-CCcccccccCCCHHHHHHHHHHHHH-cCCCcceeEEecccccccCCCCHHHHHHHHHHHHH
Confidence 456677789999999953 2221 11 111 123344444442 2333 333322 11 1
Q ss_pred hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHh--CCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 018252 206 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV--LSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 283 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~--~G~~V~~~is~~fg~~~~~r~~~e~l~~~a 283 (359)
.++.|.+.|++.|.+..... .+.+.++.++++.+.++.+.+ .|++ ..+....+.+..--.+++.+.+++
T Consensus 94 ~i~~A~~lG~~~v~~~~g~~-------~~~~~~~~~~~~~~~l~~l~~~~~gv~--l~lEn~~~~~~~~~~~~~~~~~l~ 164 (287)
T 2x7v_A 94 EVEICRKLGIRYLNIHPGSH-------LGTGEEEGIDRIVRGLNEVLNNTEGVV--ILLENVSQKGGNIGYKLEQLKKIR 164 (287)
T ss_dssp HHHHHHHHTCCEEEECCEEC-------TTSCHHHHHHHHHHHHHHHHTTCCSCE--EEEECCCCCTTEECSSHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEecCCC-------CCCCHHHHHHHHHHHHHHHHcccCCCE--EEEeCCCCCCCccCCCHHHHHHHH
Confidence 23455567999887753311 122455566665555554433 4554 344422111000014777777777
Q ss_pred HHHHHCCcCEEEE-cCC-----CCC--CcHHHHHHHHHHHHHhCC-CceEEEEeCCCC
Q 018252 284 KELHDMGCFEISL-GDT-----IGV--GTPGTVVPMLEAVMAVVP-VEKLAVHLHDTY 332 (359)
Q Consensus 284 ~~l~~~Gad~I~L-~DT-----~G~--~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~ 332 (359)
+.+-. .+.+.+ -|| .|. ..|..+.++++.+.+.++ +-...+|.||..
T Consensus 165 ~~~~~--~~~vg~~~D~~h~~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~vH~~D~~ 220 (287)
T 2x7v_A 165 DLVDQ--RDRVAITYDTCHGFDSGYDITKKEGVEALLNEIESLFGLERLKMIHLNDSK 220 (287)
T ss_dssp HHCSC--GGGEEEEEEHHHHHHTTCCTTSHHHHHHHHHHHHHHTCGGGEEEEEECEES
T ss_pred HhcCC--CCCeEEEEEhhhHHHcCCCCCchHHHHHHHHHHHHhcCccceeEEEEecCC
Confidence 65421 022222 254 221 234567788877776654 556888998754
No 163
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=91.85 E-value=0.48 Score=45.62 Aligned_cols=78 Identities=14% Similarity=0.140 Sum_probs=52.3
Q ss_pred CCCCC-CHHHHHHHHHHHHHCCcCEEEEcC-C----CCCCcHHHHHHH---HHHHHHhCCCceEEEEeCCCCCcHHHHHH
Q 018252 270 VEGAI-PPSKVAYVAKELHDMGCFEISLGD-T----IGVGTPGTVVPM---LEAVMAVVPVEKLAVHLHDTYGQSLPNIL 340 (359)
Q Consensus 270 ~~~r~-~~e~l~~~a~~l~~~Gad~I~L~D-T----~G~~~P~~v~~l---v~~l~~~~p~~~L~~H~HNd~GLAlANal 340 (359)
|+|++ +++..++.++++.+.|||.|-++= + ..+...+++.++ ++++++.+|+++|.+ |++--.+ +.
T Consensus 57 dgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI---DT~~~~V--ae 131 (318)
T 2vp8_A 57 DKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISV---DTWRAQV--AK 131 (318)
T ss_dssp -------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEE---ECSCHHH--HH
T ss_pred CCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEE---eCCCHHH--HH
Confidence 45554 778999999999999999998872 2 224445555555 677777777789988 5555444 56
Q ss_pred HHHHcCCCEEec
Q 018252 341 ISLQVSPMHAKP 352 (359)
Q Consensus 341 aAv~AGa~~ID~ 352 (359)
+|+++|+++|+-
T Consensus 132 aAl~aGa~iIND 143 (318)
T 2vp8_A 132 AACAAGADLIND 143 (318)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHhCCCEEEE
Confidence 889999999963
No 164
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=91.81 E-value=0.67 Score=44.37 Aligned_cols=173 Identities=12% Similarity=0.024 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEE-EeC---------Ch----H-hHHHHH
Q 018252 147 TGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPV-LTP---------NL----K-GFEAAI 211 (359)
Q Consensus 147 ~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~-l~~---------n~----~-gie~a~ 211 (359)
.+...+++..+.+-|++-+=..-. +. ++ +.++-.+.+..+.+ +.| +. - .+|.|+
T Consensus 70 ~~~l~~~~~~~~~~Gvdavl~~~g--------i~--~d-~~Li~~L~~~tv~gs~~~ggl~g~~~~~d~~~~~~sVe~Av 138 (307)
T 3fok_A 70 YELLERMAIALSRPGVDGVLGTPD--------II--DD-LAALGLLDDKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMV 138 (307)
T ss_dssp HHHHHHHHHHHHSTTCCEEEECHH--------HH--HH-HHHTTCCTTCEEEEECCCCSCTTCTTTTSCCCCSCCHHHHH
T ss_pred HHHHHHHHHHHhccCCCEEEECcc--------hh--hc-ccceEEecCcccccccCccccccCCCCccccccccCHHHHH
Confidence 556677777889999999865421 11 22 24444455544333 444 11 2 689999
Q ss_pred HcCCCEEEEe--c-CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEE--Eeeee-cCCCCCCCCHHHHHHHHHH
Q 018252 212 AAGAKEVAIF--A-SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGY--VSCVV-GCPVEGAIPPSKVAYVAKE 285 (359)
Q Consensus 212 ~aGv~~V~i~--~-s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~--is~~f-g~~~~~r~~~e~l~~~a~~ 285 (359)
+.|.+-+.+. + +-|+ ...+.++.+.++++.|+++|+.+.+- +. -. +.......+|+.+...++.
T Consensus 139 rlGADaV~~l~~i~~Gs~---------~e~~~l~~la~vv~ea~~~GlP~~~ep~~y-~r~gg~v~~~~dp~~Va~aaRi 208 (307)
T 3fok_A 139 DRGVDFAKTLVRINLSDA---------GTAPTLEATAHAVNEAAAAQLPIMLEPFMS-NWVNGKVVNDLSTDAVIQSVAI 208 (307)
T ss_dssp HHTCCEEEEEEEECTTCT---------THHHHHHHHHHHHHHHHHTTCCEEEEEEEE-EEETTEEEECCSHHHHHHHHHH
T ss_pred HCCCCEEEEEEEECCCCh---------hHHHHHHHHHHHHHHHHHcCCcEEEEeecc-ccCCCCcCCCCCHHHHHHHHHH
Confidence 9999987632 2 1122 13577899999999999999987543 22 11 2111224799999999999
Q ss_pred HHHCCcC----EEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEe---CCCCCcHHHHHHHHHH-cCCCEEe
Q 018252 286 LHDMGCF----EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHL---HDTYGQSLPNILISLQ-VSPMHAK 351 (359)
Q Consensus 286 l~~~Gad----~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~---HNd~GLAlANalaAv~-AGa~~ID 351 (359)
+.++|+| .|-+.=| +. ++.+.+..+ +|+-+=+ =+|.--.+.....|++ +|+.-+.
T Consensus 209 AaELGADs~~tivK~~y~------e~----f~~Vv~a~~-vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~ 271 (307)
T 3fok_A 209 AAGLGNDSSYTWMKLPVV------EE----MERVMESTT-MPTLLLGGEGGNDPDATFASWEHALTLPGVRGLT 271 (307)
T ss_dssp HHTCSSCCSSEEEEEECC------TT----HHHHGGGCS-SCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEE
T ss_pred HHHhCCCcCCCEEEeCCc------HH----HHHHHHhCC-CCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEe
Confidence 9999999 8776433 23 344444443 3443322 2244566777778888 7876553
No 165
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=91.68 E-value=2.1 Score=43.29 Aligned_cols=131 Identities=17% Similarity=0.153 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh-cCCCeEEE-EeCChHhHHHHHHcCCCEEEEe-cCCc
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLPV-LTPNLKGFEAAIAAGAKEVAIF-ASAS 225 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~-~~~~~l~~-l~~n~~gie~a~~aGv~~V~i~-~s~S 225 (359)
+-.+.++.|.++|++.|++..- .+. .....+.++.+++ .++..+.+ -+.+.++.+.+.++|++.|.+- .+.+
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a-~g~----~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs 305 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSS-HGH----SEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGS 305 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECS-CTT----SHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCT
T ss_pred chHHHHHHHHhccCceEEeccc-ccc----chHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCc
Confidence 4467788999999999999863 221 1122233444443 45665544 3567788999999999998874 2222
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~D 298 (359)
....+...+... ..+..+.++++.+++.+++|.+ +++-.+++.+.+. .++||+.+.++=
T Consensus 306 ~~~tr~~~g~g~-p~~~~i~~v~~~~~~~~iPVIa---------~GGI~~~~di~ka----la~GAd~V~iGs 364 (496)
T 4fxs_A 306 ICTTRIVTGVGV-PQITAIADAAGVANEYGIPVIA---------DGGIRFSGDISKA----IAAGASCVMVGS 364 (496)
T ss_dssp TBCHHHHHCCCC-CHHHHHHHHHHHHGGGTCCEEE---------ESCCCSHHHHHHH----HHTTCSEEEEST
T ss_pred CcccccccCCCc-cHHHHHHHHHHHhccCCCeEEE---------eCCCCCHHHHHHH----HHcCCCeEEecH
Confidence 211111122211 1345566777778788888732 3455677765543 347999888763
No 166
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=91.59 E-value=0.63 Score=43.05 Aligned_cols=117 Identities=18% Similarity=0.296 Sum_probs=72.8
Q ss_pred HHHHHHhhh--cCCCeEEEEe-CChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEE
Q 018252 183 RDVMEAVRD--LEGARLPVLT-PNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVR 259 (359)
Q Consensus 183 ~ev~~~l~~--~~~~~l~~l~-~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~ 259 (359)
+.+...+++ ..+++++.++ |+.++++.|.+.|++.|-+++. .+....-....++.++++...+++|+++|+.|.
T Consensus 114 ~~l~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~GA~~IELhTG---~Ya~a~~~~~~~~el~~i~~aa~~A~~lGL~Vn 190 (243)
T 1m5w_A 114 DKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTG---CYADAKTDAEQAQELARIAKAATFAASLGLKVN 190 (243)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHTTCSEEEEECH---HHHHCCSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEEech---hhhcCCCchhHHHHHHHHHHHHHHHHHcCCEEe
Confidence 344444443 3577777777 5778999999999999999864 233221111234678999999999999999984
Q ss_pred EEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc-----CCCCCCcHHHHHHHHHHH
Q 018252 260 GYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG-----DTIGVGTPGTVVPMLEAV 315 (359)
Q Consensus 260 ~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~-----DT~G~~~P~~v~~lv~~l 315 (359)
+ | .-.+.+.+..++ .+ -+..++++. +.+=++.+..|+++.+.+
T Consensus 191 A------G----HgL~y~Nv~~ia-~i--p~i~ElnIGHaiia~Al~~Gl~~aV~~m~~~~ 238 (243)
T 1m5w_A 191 A------G----HGLTYHNVKAIA-AI--PEMHELNIGHAIIGRAVMTGLKDAVAEMKRLM 238 (243)
T ss_dssp E------E----SSCCTTTHHHHH-TC--TTEEEEEECHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred c------C----CCCCHHHHHHHh-hC--CCCeEEccCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3 1 123334444443 11 245677653 444455566666666555
No 167
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=91.49 E-value=1.1 Score=42.45 Aligned_cols=177 Identities=10% Similarity=0.063 Sum_probs=100.2
Q ss_pred CHHHHHHHHHHHHhC----CCCEEEEeccCC-CCCcCC-CC--CHHHHHHHhh---hcCCCeEEEEeCChHhHHHHHHcC
Q 018252 146 PTGVKVELIRRLVSS----GLPVVEATSFVS-PKWVPQ-LA--DARDVMEAVR---DLEGARLPVLTPNLKGFEAAIAAG 214 (359)
Q Consensus 146 ~~~~k~~ia~~L~~a----Gv~~IEvG~fvs-pk~vPq-~~--D~~ev~~~l~---~~~~~~l~~l~~n~~gie~a~~aG 214 (359)
+.++.+++++.|.++ |+..|=-++|-- |+.-|. +. .-++=++.++ +-.+..+..=.-+...++.+.+.
T Consensus 29 ~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~- 107 (288)
T 3tml_A 29 SEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV- 107 (288)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh-
Confidence 688999999999986 877764344421 332221 11 1112122333 22345444333466777777666
Q ss_pred CCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHHCCc--
Q 018252 215 AKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAKELHDMGC-- 291 (359)
Q Consensus 215 v~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r-~~~e~l~~~a~~l~~~Ga-- 291 (359)
++.+.+-. +...| . ++++++...|.+|. +.. +. .+++++...++.+.+.|.
T Consensus 108 vd~lkIgA-----~~~~n----~--------~LLr~~a~~gkPVi------lK~---G~~~t~~e~~~ave~i~~~Gn~~ 161 (288)
T 3tml_A 108 VDVLQTPA-----FLCRQ----T--------DFIHACARSGKPVN------IKK---GQFLAPHDMKNVIDKARDAAREA 161 (288)
T ss_dssp CSEEEECG-----GGTTC----H--------HHHHHHHTSSSCEE------EEC---CTTCCTTHHHHHHHHHHHHHHTT
T ss_pred CCEEEECc-----ccccC----H--------HHHHHHHccCCcEE------EeC---CCCCCHHHHHHHHHHHHHcCCCc
Confidence 78777742 21111 1 23445557788873 222 23 477888888888888887
Q ss_pred ----CEEEEcCCCCCCcHH----HHHHHHHHHHHhCCCceEEE-EeCC-------------CCCcHHHHHHHHHHcCCC-
Q 018252 292 ----FEISLGDTIGVGTPG----TVVPMLEAVMAVVPVEKLAV-HLHD-------------TYGQSLPNILISLQVSPM- 348 (359)
Q Consensus 292 ----d~I~L~DT~G~~~P~----~v~~lv~~l~~~~p~~~L~~-H~HN-------------d~GLAlANalaAv~AGa~- 348 (359)
+.|.|+.-.=...+. .+.. +..+++ + +.++.+ +.|- ++.+-..-++||+.+||+
T Consensus 162 ~~~~~~i~L~erg~~y~~~~~~vdl~~-i~~lk~-~-~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadG 238 (288)
T 3tml_A 162 GLSEDRFMACERGVSFGYNNLVSDMRS-LAIMRE-T-NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAG 238 (288)
T ss_dssp TCCSCCEEEEECCEECSSSCEECCHHH-HHHGGG-G-SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSE
T ss_pred cCCCCcEEEEeCCCCCCCCcCcCCHHH-HHHHHh-c-CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCE
Confidence 778877632211222 2333 444665 5 578888 6674 122226778999999999
Q ss_pred -EEec
Q 018252 349 -HAKP 352 (359)
Q Consensus 349 -~ID~ 352 (359)
.|+.
T Consensus 239 l~iE~ 243 (288)
T 3tml_A 239 LFMET 243 (288)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 7765
No 168
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=91.47 E-value=5.1 Score=37.58 Aligned_cols=114 Identities=11% Similarity=0.085 Sum_probs=78.4
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 34 v~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~a 98 (297)
T 3flu_A 34 IDWHIENGTDGIVAVGTTGESA-----TLSVEEHTAVIEAVVKHVAK-RVPVIAGT---------GANNTVEAIALSQAA 98 (297)
T ss_dssp HHHHHHTTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCccccCcc-----cCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHHHHH
Confidence 5566778999998888887764 35677777777777777653 25553222 245778899999999
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEEE-----eCCCCCcHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVH-----LHDTYGQSL 336 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H-----~HNd~GLAl 336 (359)
.++|+|.+-+. =..-..+++.+.+.++++.+..+ +||-++ .+.++...+
T Consensus 99 ~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiilYn~P~~tg~~l~~~~ 153 (297)
T 3flu_A 99 EKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATS-IPMIIYNVPGRTVVSMTNDT 153 (297)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEECHHHHSSCCCHHH
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEECCchhccCCCHHH
Confidence 99999975543 34445577888999999888874 455543 345555444
No 169
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=91.47 E-value=3.3 Score=37.15 Aligned_cols=178 Identities=18% Similarity=0.101 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEE--eCChHhHHHHHHcCCCEEEEecCCc
Q 018252 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL--TPNLKGFEAAIAAGAKEVAIFASAS 225 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l--~~n~~gie~a~~aGv~~V~i~~s~S 225 (359)
++-.++++.+.+.|++.|.+--..... .......+..+.+++..++.+.+. +.+.++++.++++|++.|.+-..
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~--~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~-- 106 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATH--EERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSA-- 106 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSST--TCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHH--
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccc--cCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChH--
Confidence 467889999999999998775221100 000111122334443334444433 34678999999999999988422
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCC-cEEEEEee---------eecCCCCCCCCHHHHHHHHHHHHHCCcCEEE
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVLSI-PVRGYVSC---------VVGCPVEGAIPPSKVAYVAKELHDMGCFEIS 295 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~-~V~~~is~---------~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~ 295 (359)
.+.. .+.+.++.+. .|. .+...+++ ..-.+. ..+.....+.++++.+.|++.|.
T Consensus 107 -~l~~----------p~~~~~~~~~---~~~~~i~~~~~~~~~~g~~~v~~~g~~--~~~~~~~~e~~~~~~~~G~~~i~ 170 (252)
T 1ka9_F 107 -AVRR----------PELIRELADH---FGAQAVVLAIDARWRGDFPEVHVAGGR--VPTGLHAVEWAVKGVELGAGEIL 170 (252)
T ss_dssp -HHHC----------THHHHHHHHH---HCGGGEEEEEEEEEETTEEEEEETTTT--EEEEEEHHHHHHHHHHHTCCEEE
T ss_pred -HHhC----------cHHHHHHHHH---cCCCcEEEEEEEecCCCCEEEEECCCc--cccCCcHHHHHHHHHHcCCCEEE
Confidence 1100 0112233332 231 12222221 010000 00111245667777888999887
Q ss_pred EcCC--CCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEEe
Q 018252 296 LGDT--IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHAK 351 (359)
Q Consensus 296 L~DT--~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~ID 351 (359)
+.++ .|...... .++++.+++..+ +|+-.- -|.. ..++..+.++||+.|=
T Consensus 171 ~~~~~~~g~~~g~~-~~~i~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~Gadgv~ 223 (252)
T 1ka9_F 171 LTSMDRDGTKEGYD-LRLTRMVAEAVG-VPVIAS----GGAGRMEHFLEAFQAGAEAAL 223 (252)
T ss_dssp EEETTTTTTCSCCC-HHHHHHHHHHCS-SCEEEE----SCCCSHHHHHHHHHTTCSEEE
T ss_pred EecccCCCCcCCCC-HHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHCCCHHHH
Confidence 7643 34432212 456677777653 344432 3444 3788888889998764
No 170
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=91.37 E-value=3.3 Score=39.03 Aligned_cols=119 Identities=18% Similarity=0.078 Sum_probs=75.7
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.+..+++++.+
T Consensus 38 v~~li~~Gv~Gl~v~GtTGE~~-----~Ls~eEr~~v~~~~~~~~~g-rvpViaGv---------g~~~t~~ai~la~~A 102 (303)
T 2wkj_A 38 VQFNIQQGIDGLYVGGSTGEAF-----VQSLSEREQVLEIVAEEAKG-KIKLIAHV---------GCVSTAESQQLAASA 102 (303)
T ss_dssp HHHHHHTTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-TSEEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECeeccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHH
Confidence 4556678999888887777754 34667766666666666543 34553222 234667888899999
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE-E----eCCCCCcHHHHHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV-H----LHDTYGQSLPNIL 340 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H----~HNd~GLAlANal 340 (359)
.++|+|.+-+. =..--.+++.+.+.++++.+..+++||-+ + .+.++...+-.-|
T Consensus 103 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~L 162 (303)
T 2wkj_A 103 KRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTL 162 (303)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHH
T ss_pred HhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHH
Confidence 99999865543 33333577888888888888766345444 3 3455554443333
No 171
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=91.37 E-value=1.1 Score=42.65 Aligned_cols=177 Identities=14% Similarity=0.053 Sum_probs=101.8
Q ss_pred CCHHHHHHHHHHHHhC----CCCEEEEeccCC-CCCcCC----CCCHHHHHHHhh---hcCCCeEEEEeCChHhHHHHHH
Q 018252 145 VPTGVKVELIRRLVSS----GLPVVEATSFVS-PKWVPQ----LADARDVMEAVR---DLEGARLPVLTPNLKGFEAAIA 212 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~a----Gv~~IEvG~fvs-pk~vPq----~~D~~ev~~~l~---~~~~~~l~~l~~n~~gie~a~~ 212 (359)
=+.++.+++++.|.++ |+..|=-++|-- |+.-|. +. -++=++.++ +-.+..+..=.-+...++.+.+
T Consensus 52 es~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg-~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~ 130 (298)
T 3fs2_A 52 ETRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIG-LEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAP 130 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CC-HHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcC-HHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHh
Confidence 3688999999999976 465554444431 332221 11 112123333 2235554443346677777666
Q ss_pred cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHHCCc
Q 018252 213 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAKELHDMGC 291 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r-~~~e~l~~~a~~l~~~Ga 291 (359)
. ++.+.+-. +.-.| . ++++++...|.+|. +.. +. .+++++...++.+.+.|.
T Consensus 131 ~-vd~lkIgA-----~~~~n----~--------~LLr~va~~gkPVi------lK~---Gms~t~~ei~~ave~i~~~Gn 183 (298)
T 3fs2_A 131 V-VDVLQIPA-----FLCRQ----T--------DLLIAAARTGRVVN------VKK---GQFLAPWDMKNVLAKITESGN 183 (298)
T ss_dssp T-CSEEEECG-----GGTTC----H--------HHHHHHHHTTSEEE------EEC---CTTCCGGGHHHHHHHHHTTTC
T ss_pred h-CCEEEECc-----cccCC----H--------HHHHHHHccCCcEE------EeC---CCCCCHHHHHHHHHHHHHcCC
Confidence 5 77777632 11111 1 23444556788772 222 23 488888999999999999
Q ss_pred CEEEEcCCCCCC-cHH---HHHHHHHHHHHhCCCceEEE-EeCC-------------CCCcHHHHHHHHHHcCCC--EEe
Q 018252 292 FEISLGDTIGVG-TPG---TVVPMLEAVMAVVPVEKLAV-HLHD-------------TYGQSLPNILISLQVSPM--HAK 351 (359)
Q Consensus 292 d~I~L~DT~G~~-~P~---~v~~lv~~l~~~~p~~~L~~-H~HN-------------d~GLAlANalaAv~AGa~--~ID 351 (359)
+.|.|+.-.-.. .+. ++.. +..+++ + +.++++ ..|- .+.+-..-++||+.+||+ .|+
T Consensus 184 ~~iiL~erg~~y~~~~~~vdl~~-i~~lk~-~-~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE 260 (298)
T 3fs2_A 184 PNVLATERGVSFGYNTLVSDMRA-LPIMAG-L-GAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIE 260 (298)
T ss_dssp CCEEEEECCEECSSSCEECCTTH-HHHHHT-T-TSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEE
T ss_pred CeEEEEECCCCCCCCCCccCHHH-HHHHHH-c-CCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEE
Confidence 888887643211 111 2222 455676 6 578888 6664 112337778999999999 776
Q ss_pred c
Q 018252 352 P 352 (359)
Q Consensus 352 ~ 352 (359)
.
T Consensus 261 ~ 261 (298)
T 3fs2_A 261 T 261 (298)
T ss_dssp E
T ss_pred e
Confidence 5
No 172
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=91.35 E-value=0.86 Score=43.36 Aligned_cols=81 Identities=9% Similarity=0.114 Sum_probs=70.9
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCCCceEEEEe-CCCCCcHHHHHHHHHHcCC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHL-HDTYGQSLPNILISLQVSP 347 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~L~~H~-HNd~GLAlANalaAv~AGa 347 (359)
+..|.+.+.++++.+.+.|++-|.++=|.|= ++.++-.++++.+.+..+.+++-++. +|+..-++..+..|-++||
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999996 67888889999888877557777766 7899999999999999999
Q ss_pred CEEec
Q 018252 348 MHAKP 352 (359)
Q Consensus 348 ~~ID~ 352 (359)
+.+=+
T Consensus 104 davlv 108 (313)
T 3dz1_A 104 AGVMI 108 (313)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98744
No 173
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=91.30 E-value=2.3 Score=39.80 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=67.3
Q ss_pred HHHHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCC-------------------CC
Q 018252 243 RYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI-------------------GV 302 (359)
Q Consensus 243 ~i~~~i~~Ak~~G~~-V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~-------------------G~ 302 (359)
++.+..+.+|+.|-+ +..|++ -|. =+++...++++.+.+.|+|.|.|.=-. .-
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~--aGd-----P~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G 78 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVT--IGD-----PNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAK 78 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEE--TTS-----SCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCeEEEEEe--CCC-----CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC
Confidence 355666666666654 556665 333 377889999999999999976665222 12
Q ss_pred CcHHHHHHHHHHHHHhCCCceEEEEeCCC----CCcHHHHHHHHHHcCCCEE
Q 018252 303 GTPGTVVPMLEAVMAVVPVEKLAVHLHDT----YGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 303 ~~P~~v~~lv~~l~~~~p~~~L~~H~HNd----~GLAlANalaAv~AGa~~I 350 (359)
.+..++-++++.+|+..+.+||.+-..-| +|.. .-+..+.++|++.+
T Consensus 79 ~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~-~f~~~~~~aGvdGv 129 (271)
T 3nav_A 79 TTPDICFELIAQIRARNPETPIGLLMYANLVYARGID-DFYQRCQKAGVDSV 129 (271)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHH-HHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHH-HHHHHHHHCCCCEE
Confidence 34456667888898876667888765543 3442 35667889999874
No 174
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=91.29 E-value=1.8 Score=39.35 Aligned_cols=105 Identities=10% Similarity=0.019 Sum_probs=57.5
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++.|.+.|++.|.+.....+.. .....+...+.++++.++|+++|+++. +... ..+++.+.++++.+
T Consensus 108 i~~a~~lG~~~v~~~~G~~~~~----~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE~~-------~~~~~~~~~l~~~~ 174 (290)
T 3tva_A 108 SDFASWVGCPAIGLHIGFVPES----SSPDYSELVRVTQDLLTHAANHGQAVH--LETG-------QESADHLLEFIEDV 174 (290)
T ss_dssp HHHHHHHTCSEEEECCCCCCCT----TSHHHHHHHHHHHHHHHHHHTTTCEEE--EECC-------SSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCccc----chHHHHHHHHHHHHHHHHHHHcCCEEE--EecC-------CCCHHHHHHHHHhc
Confidence 4555667999988864321110 111245667888899999999998762 2211 24677777777665
Q ss_pred HHCCcCEEE-EcCCCCCCc-H-HHHHHHHHHHHHhCCCceEEEEeCCC
Q 018252 287 HDMGCFEIS-LGDTIGVGT-P-GTVVPMLEAVMAVVPVEKLAVHLHDT 331 (359)
Q Consensus 287 ~~~Gad~I~-L~DT~G~~~-P-~~v~~lv~~l~~~~p~~~L~~H~HNd 331 (359)
- ...+. .-||.=... - .+..+.++.+. + -...+|.||.
T Consensus 175 ~---~~~~g~~~D~~h~~~~g~~d~~~~l~~~~---~-~i~~vHl~D~ 215 (290)
T 3tva_A 175 N---RPNLGINFDPANMILYGTGNPIEALRKVA---R-YVRSIHCKDA 215 (290)
T ss_dssp C---CTTEEEEECHHHHHHTTCSCHHHHHHHHG---G-GEEEEEECEE
T ss_pred C---CCCEEEEeccHHHHHhCCCCHHHHHHHHH---h-hheEEEeccc
Confidence 3 23222 235422111 0 12233333332 3 4678899986
No 175
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=91.26 E-value=3.5 Score=39.00 Aligned_cols=182 Identities=10% Similarity=0.053 Sum_probs=103.4
Q ss_pred CCHHHHHHHHHHHHhCC----CCEEEEeccCC-CCCcC-CCC--CHHHHHHHhhh---cCCCeEEEEeCChHhHHHHHHc
Q 018252 145 VPTGVKVELIRRLVSSG----LPVVEATSFVS-PKWVP-QLA--DARDVMEAVRD---LEGARLPVLTPNLKGFEAAIAA 213 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aG----v~~IEvG~fvs-pk~vP-q~~--D~~ev~~~l~~---~~~~~l~~l~~n~~gie~a~~a 213 (359)
=+.+.-+++++.|.++| ...+=-.+|.- |+.-| .+. +.++-++.+++ -.++.+..=.-+...++-+.+
T Consensus 29 ~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~sf~g~~l~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~- 107 (292)
T 1o60_A 29 ESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKDTFGVKIITDVHEIYQCQPVAD- 107 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHT-
T ss_pred cCHHHHHHHHHHHHHHhhhhCEeEEEhhhcccCCCCChHHhhhhhHHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHh-
Confidence 37889999999999875 44332233321 22211 111 12222333332 234544443346677777666
Q ss_pred CCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHHCCcC
Q 018252 214 GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 214 Gv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r-~~~e~l~~~a~~l~~~Gad 292 (359)
.++.+.+-.. .-.| . ++++++...|.+|. +.. +. .+++++...++.+...|..
T Consensus 108 ~vd~~kIgA~-----~~~n----~--------~Ll~~~a~~~kPV~------lk~---G~~~t~~ei~~Av~~i~~~Gn~ 161 (292)
T 1o60_A 108 VVDIIQLPAF-----LARQ----T--------DLVEAMAKTGAVIN------VKK---PQFLSPSQMGNIVEKIEECGND 161 (292)
T ss_dssp TCSEEEECGG-----GTTC----H--------HHHHHHHHTTCEEE------EEC---CTTSCGGGHHHHHHHHHHTTCC
T ss_pred cCCEEEECcc-----cccC----H--------HHHHHHHcCCCcEE------EeC---CCCCCHHHHHHHHHHHHHcCCC
Confidence 6777777431 1111 1 24444446788873 322 23 3777888889999999987
Q ss_pred EEEEcCCCCCC-cHH---HHHHHHHHHHHhCCCceEEE---Ee-----------CCCCCcHHHHHHHHHHcCCC--EEec
Q 018252 293 EISLGDTIGVG-TPG---TVVPMLEAVMAVVPVEKLAV---HL-----------HDTYGQSLPNILISLQVSPM--HAKP 352 (359)
Q Consensus 293 ~I~L~DT~G~~-~P~---~v~~lv~~l~~~~p~~~L~~---H~-----------HNd~GLAlANalaAv~AGa~--~ID~ 352 (359)
.|.|+--.+.. .+. .+..+ ..+++.+++.++++ |. -....+...-+.+|+.+||+ .|+.
T Consensus 162 ~i~L~~rg~~~~y~~~~~dl~~i-~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~ 240 (292)
T 1o60_A 162 KIILCDRGTNFGYDNLIVDMLGF-SVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEA 240 (292)
T ss_dssp CEEEEECCEECSTTCEECCTTHH-HHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEE
T ss_pred eEEEEECCCCCCCCccccCHHHH-HHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEe
Confidence 66666643322 221 33333 46888876678999 66 23333446777799999999 7775
Q ss_pred ee
Q 018252 353 CF 354 (359)
Q Consensus 353 tl 354 (359)
=+
T Consensus 241 H~ 242 (292)
T 1o60_A 241 HP 242 (292)
T ss_dssp ES
T ss_pred cC
Confidence 43
No 176
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=91.21 E-value=0.97 Score=42.62 Aligned_cols=81 Identities=12% Similarity=-0.013 Sum_probs=68.9
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhC-CCceEEEE-eCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVV-PVEKLAVH-LHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~L~~H-~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.|= +++++-.++++.+.+.. +.+++-+| ++|+.--++..+..|-++|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 102 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAG 102 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999999995 57888888888888765 34666665 4688999999999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.+=.
T Consensus 103 adavlv 108 (297)
T 3flu_A 103 ADYTLS 108 (297)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 988744
No 177
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=91.19 E-value=4.9 Score=41.01 Aligned_cols=160 Identities=16% Similarity=0.154 Sum_probs=104.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc-CCCeEEEEeCChHhHH---HHHHcCCCEEE
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKGFE---AAIAAGAKEVA 219 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~-~~~~l~~l~~n~~gie---~a~~aGv~~V~ 219 (359)
.++..++..|.+.-.+.|+|.|-+.| +.. -.|..++.+.+.+. ..+.+.+-+.+.++++ ..++. .|.|.
T Consensus 204 ~lTekD~~Dl~~f~~~~~vD~Ia~SF-Vr~-----a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~-sDgim 276 (511)
T 3gg8_A 204 VIGEKDKHDILNFGIPMGCNFIAASF-VQS-----ADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAE-ADGIM 276 (511)
T ss_dssp SSCHHHHHHHHHTTTTTTCCEEEETT-CCS-----HHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHH-CSCEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcC-CCC-----HHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHh-CCeEE
Confidence 46677777776778889999987765 331 14566666666543 4678888887776654 44443 35555
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCCCCCHHHHHHHHHHHHHCCcCEEEE-c
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-PVEGAIPPSKVAYVAKELHDMGCFEISL-G 297 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-~~~~r~~~e~l~~~a~~l~~~Gad~I~L-~ 297 (359)
+- -.|.- .-...++.....+.+++.|+.+|..|... +...-. -...+-+..++.+++.++.+ |+|.|.| +
T Consensus 277 Va--RGDLg----vei~~e~v~~~qk~ii~~~~~~gkpvi~A-TQmLeSMi~~p~PTRAEvsDVAnAV~d-GaDavMLSg 348 (511)
T 3gg8_A 277 IA--RGDLG----MEIPPEKVFLAQKMMIAKCNVVGKPVITA-TQMLESMIKNPRPTRAEAADVANAVLD-GTDCVMLSG 348 (511)
T ss_dssp EE--HHHHH----HHSCHHHHHHHHHHHHHHHHHTTCCEEEE-SSSSGGGGTCSSCCHHHHHHHHHHHHH-TCSEEEESH
T ss_pred Ee--cchhc----CcCCHHHHHHHHHHHHHHHHHcCCCeEEe-hHHHHHhhcCCCccHHHHHHHHHHHHh-CCCEEEecc
Confidence 42 11221 12345677777789999999999987321 110100 01124577789999998887 9999999 5
Q ss_pred CCCCCCcHHHHHHHHHHHHHh
Q 018252 298 DTIGVGTPGTVVPMLEAVMAV 318 (359)
Q Consensus 298 DT~G~~~P~~v~~lv~~l~~~ 318 (359)
.|+---.|.+..+.+..+...
T Consensus 349 ETA~G~yPveaV~~M~~I~~~ 369 (511)
T 3gg8_A 349 ETANGEFPVITVETMARICYE 369 (511)
T ss_dssp HHHTCSCHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHH
Confidence 677777898888887777654
No 178
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=91.10 E-value=4.7 Score=38.28 Aligned_cols=118 Identities=14% Similarity=0.090 Sum_probs=80.7
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+... ++|.+.+ +..+.++.+++++.+
T Consensus 50 v~~li~~Gv~Gl~v~GtTGE~~-----~Ls~~Er~~v~~~~v~~~~gr-vpViaGv---------g~~st~eai~la~~A 114 (314)
T 3qze_A 50 VDFHLQEGTNAIVAVGTTGESA-----TLDVEEHIQVIRRVVDQVKGR-IPVIAGT---------GANSTREAVALTEAA 114 (314)
T ss_dssp HHHHHHHTCCEEEESSGGGTGG-----GCCHHHHHHHHHHHHHHHTTS-SCEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCCC-CcEEEeC---------CCcCHHHHHHHHHHH
Confidence 4556778999998887777764 356777777777777776532 5553222 245778899999999
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEEE-----eCCCCCcHHHHHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVH-----LHDTYGQSLPNIL 340 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H-----~HNd~GLAlANal 340 (359)
.++|+|.+-+. =..-..+++.+.+.++++.+..+ +||-+. ...++...+..-|
T Consensus 115 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P~~tg~~l~~~~~~~L 173 (314)
T 3qze_A 115 KSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVA-IPQILYNVPGRTSCDMLPETVERL 173 (314)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSC-SCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCccccCCCCCHHHHHHH
Confidence 99999975554 34445677889999999988874 455553 3455555544433
No 179
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=91.07 E-value=9.5 Score=36.31 Aligned_cols=159 Identities=13% Similarity=0.104 Sum_probs=90.5
Q ss_pred HHHHHHhhhcCCCeEEEEeC-ChHhHHHHHHcCCCEEEEe-cCCchH-HHHhhh-cCCHHHHHHHHHHHHHHHHhCCCcE
Q 018252 183 RDVMEAVRDLEGARLPVLTP-NLKGFEAAIAAGAKEVAIF-ASASEA-FSKSNI-NCSIEDSLVRYRAVAHAAKVLSIPV 258 (359)
Q Consensus 183 ~ev~~~l~~~~~~~l~~l~~-n~~gie~a~~aGv~~V~i~-~s~S~~-~~~~n~-~~t~~e~l~~i~~~i~~Ak~~G~~V 258 (359)
..+++.+.. ++..+..+.. +.--...+-++|++-|.+. .+.+-. +-.-.. -.|.++.+..++.+.+.+ ...+.|
T Consensus 14 ~~lr~ll~~-~~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~-~~~~Pv 91 (307)
T 3lye_A 14 KKLRHLLEN-TDELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLD-PFGPPL 91 (307)
T ss_dssp HHHHHHHHH-CCCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSS-TTSCCE
T ss_pred HHHHHHHhC-CCCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccC-CCCCcE
Confidence 334444443 3333434333 3333444556799988873 222222 111111 246777776665554321 113566
Q ss_pred EEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCC-----------CCcHHHHHHHHHHHHHhC----CCce
Q 018252 259 RGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVV----PVEK 323 (359)
Q Consensus 259 ~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~----p~~~ 323 (359)
.+.+- || + -+++.+.+.++.+.++|+..|.|-|.++ +...++..+.|++.++.. ++.-
T Consensus 92 iaD~d--~G--y---g~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~ 164 (307)
T 3lye_A 92 IADMD--TG--Y---GGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFV 164 (307)
T ss_dssp EEECT--TC--S---SSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred EEECC--CC--C---CCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeE
Confidence 44442 32 1 2688899999999999999999999986 334456666666666532 3333
Q ss_pred EEEEeCC----CCCcHHHHHHHHHHcCCCEE
Q 018252 324 LAVHLHD----TYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 324 L~~H~HN----d~GLAlANalaAv~AGa~~I 350 (359)
|-.-+-. .+--++.-+.+-.+||||.|
T Consensus 165 I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~i 195 (307)
T 3lye_A 165 LIARTDALQSLGYEECIERLRAARDEGADVG 195 (307)
T ss_dssp EEEEECCHHHHCHHHHHHHHHHHHHTTCSEE
T ss_pred EEEechhhhccCHHHHHHHHHHHHHCCCCEE
Confidence 3333322 22247778888999999986
No 180
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=91.05 E-value=0.78 Score=43.11 Aligned_cols=81 Identities=9% Similarity=0.017 Sum_probs=69.0
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhC-CCceEEEEe-CCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVV-PVEKLAVHL-HDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~L~~H~-HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.|= ++.++-.++++.+.+.. +.+++-+|. +|+..-++..+..|-++|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLG 96 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 5799999999999999999999999999995 57888888888888765 346666664 688888999999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.|=+
T Consensus 97 adavlv 102 (291)
T 3tak_A 97 ADAALL 102 (291)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998743
No 181
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=90.99 E-value=0.7 Score=43.48 Aligned_cols=121 Identities=20% Similarity=0.280 Sum_probs=79.8
Q ss_pred CHHHHHHHhhh--cCCCeEEEEe-CChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCc
Q 018252 181 DARDVMEAVRD--LEGARLPVLT-PNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP 257 (359)
Q Consensus 181 D~~ev~~~l~~--~~~~~l~~l~-~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~ 257 (359)
+.+.+...+++ ..+++++.++ |..++++.|.+.|++.|-++.. .+.........++.++++..++++|+++|+.
T Consensus 140 ~~~~L~~~i~~L~~~GIrVSLFIDpd~~qI~aA~~~GAd~IELhTG---~YA~a~~~~~~~~el~rl~~aA~~A~~lGL~ 216 (278)
T 3gk0_A 140 HFDAVRAACKQLADAGVRVSLFIDPDEAQIRAAHETGAPVIELHTG---RYADAHDAAEQQREFERIATGVDAGIALGLK 216 (278)
T ss_dssp THHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHTCSEEEECCH---HHHTCSSHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEEecc---hhhccCCchhHHHHHHHHHHHHHHHHHcCCE
Confidence 34455555554 3689999888 5779999999999999999753 2221100012456799999999999999999
Q ss_pred EEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE-----cCCCCCCcHHHHHHHHHHHHH
Q 018252 258 VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL-----GDTIGVGTPGTVVPMLEAVMA 317 (359)
Q Consensus 258 V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L-----~DT~G~~~P~~v~~lv~~l~~ 317 (359)
|.+ | .-.+.+.+..+++ + -+..++++ ++.+=++....|+++.+.+++
T Consensus 217 VnA------G----HGL~y~Nv~~ia~-i--p~i~ElnIGHaiIa~Al~~Gl~~AVr~mk~lm~~ 268 (278)
T 3gk0_A 217 VNA------G----HGLHYTNVQAIAA-L--PGIAELNIGHAIVAHAVFVGWDNAVREMKAIMVA 268 (278)
T ss_dssp EEE------C----TTCCTTTHHHHHT-C--TTEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred Eec------C----CCCCHHHHHHHHh-C--CCCeEEecCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 842 1 1233344444432 1 25677776 455666677777777776664
No 182
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=90.98 E-value=0.84 Score=43.09 Aligned_cols=77 Identities=19% Similarity=0.173 Sum_probs=55.3
Q ss_pred CCCCC-CHHHHHHHHHHHHHCCcCEEEEcC-CC--C---CCc---HHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHH
Q 018252 270 VEGAI-PPSKVAYVAKELHDMGCFEISLGD-TI--G---VGT---PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNI 339 (359)
Q Consensus 270 ~~~r~-~~e~l~~~a~~l~~~Gad~I~L~D-T~--G---~~~---P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANa 339 (359)
+++++ +++...+.++++.+.|||.|-+.= +. | +.. ..++..+++.+++.+ +++|.++..+ ..-+
T Consensus 30 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT~~-----~~va 103 (282)
T 1aj0_A 30 DGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDTSK-----PEVI 103 (282)
T ss_dssp CCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEECCC-----HHHH
T ss_pred cccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeCCC-----HHHH
Confidence 45554 788999999999999999988875 33 2 111 333555666666665 5799998766 3556
Q ss_pred HHHHHcCCCEEec
Q 018252 340 LISLQVSPMHAKP 352 (359)
Q Consensus 340 laAv~AGa~~ID~ 352 (359)
.+|+++|+++|+-
T Consensus 104 ~aAl~aGa~iINd 116 (282)
T 1aj0_A 104 RESAKVGAHIIND 116 (282)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 6899999999963
No 183
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=90.97 E-value=2.5 Score=40.57 Aligned_cols=135 Identities=13% Similarity=0.061 Sum_probs=87.5
Q ss_pred HHHHHHcCCCEEEEec-CCc-hHHHHhhh-cCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFA-SAS-EAFSKSNI-NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 283 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~-s~S-~~~~~~n~-~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a 283 (359)
...+-++|++-|.+.- +.+ -.+-.-.. -.|.++.+..++.+.+.++ .+.|.+.+- || + - +++.+.+.+
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~--~~PviaD~d--~G--y--g-~~~~v~~tv 122 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP--NLCVVVDGD--TG--G--G-GPLNVQRFI 122 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS--SSEEEEECT--TC--S--S-SHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc--CCCEEEeCC--CC--C--C-CHHHHHHHH
Confidence 4445568999988753 222 11111111 2578888888887776543 466654442 33 2 2 889999999
Q ss_pred HHHHHCCcCEEEEcCCCC-----------CCcHHHHHHHHHHHHHhC--CCceEEEEeCCCC----CcHHHHHHHHHHcC
Q 018252 284 KELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVV--PVEKLAVHLHDTY----GQSLPNILISLQVS 346 (359)
Q Consensus 284 ~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~--p~~~L~~H~HNd~----GLAlANalaAv~AG 346 (359)
+++.++|+..|.|-|..+ +....+..+.|+++++.. ++..|-.-.-... --++.-+.+-.+||
T Consensus 123 ~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAG 202 (318)
T 1zlp_A 123 RELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAG 202 (318)
T ss_dssp HHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcC
Confidence 999999999999999974 333456667787777764 4444444432211 14677888999999
Q ss_pred CCEE
Q 018252 347 PMHA 350 (359)
Q Consensus 347 a~~I 350 (359)
|+.|
T Consensus 203 Ad~i 206 (318)
T 1zlp_A 203 ADAT 206 (318)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 9976
No 184
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=90.96 E-value=1.4 Score=40.32 Aligned_cols=95 Identities=15% Similarity=0.027 Sum_probs=60.6
Q ss_pred HHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCC-------------------CCCc
Q 018252 245 RAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI-------------------GVGT 304 (359)
Q Consensus 245 ~~~i~~Ak~~G~~-V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~-------------------G~~~ 304 (359)
.+..+.+|+.|-+ +..|+. - +..+.+...+.++.+.+.|+|.|-|.... +-++
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~--~-----g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~ 78 (262)
T 1rd5_A 6 SDTMAALMAKGKTAFIPYIT--A-----GDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTT 78 (262)
T ss_dssp HHHHHHHHHTTCCEEEEEEE--T-----TSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHhcCCceEEEEee--C-----CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCC
Confidence 3444455555544 455664 1 23356889999999999999988885432 3357
Q ss_pred HHHHHHHHHHHHHhCCCceEEEEeCCC----CCcHHHHHHHHHHcCCCEEec
Q 018252 305 PGTVVPMLEAVMAVVPVEKLAVHLHDT----YGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 305 P~~v~~lv~~l~~~~p~~~L~~H~HNd----~GLAlANalaAv~AGa~~ID~ 352 (359)
+....++++.+++.. ++|+.+=...+ +|+. .+.++||+.|..
T Consensus 79 ~~~~~~~i~~ir~~~-~~Pv~~m~~~~~~~~~~~~-----~a~~aGadgv~v 124 (262)
T 1rd5_A 79 MDAVLEMLREVTPEL-SCPVVLLSYYKPIMFRSLA-----KMKEAGVHGLIV 124 (262)
T ss_dssp HHHHHHHHHHHGGGC-SSCEEEECCSHHHHSCCTH-----HHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHhcC-CCCEEEEecCcHHHHHHHH-----HHHHcCCCEEEE
Confidence 888889999999874 35654311111 1221 288999997754
No 185
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=90.83 E-value=4 Score=37.61 Aligned_cols=126 Identities=20% Similarity=0.180 Sum_probs=74.6
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
.+.|.+.|+..|-+.. .|.. .+.+..+..++++ +.+.+.|. +..+.+.-+.-++.+
T Consensus 49 c~eA~~~~~~aVcV~p----~~v~---------------~a~~~L~~s~v~v----~tVigFP~-G~~~~~~Kv~Ea~~A 104 (239)
T 3ngj_A 49 CSEAAEYKFASVCVNP----TWVP---------------LCAELLKGTGVKV----CTVIGFPL-GATPSEVKAYETKVA 104 (239)
T ss_dssp HHHHHHHTCSEEEECG----GGHH---------------HHHHHHTTSSCEE----EEEESTTT-CCSCHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEECH----HHHH---------------HHHHHhCCCCCeE----EEEeccCC-CCCchHHHHHHHHHH
Confidence 3455667888777732 2211 2222233445554 33456664 455566666667778
Q ss_pred HHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHH----HHHHHHHHcCCCEEeceeeec
Q 018252 287 HDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL----PNILISLQVSPMHAKPCFTFA 357 (359)
Q Consensus 287 ~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAl----ANalaAv~AGa~~ID~tl~~~ 357 (359)
.+.|||+|.+.=-+|. ..-..+.+-++++++..++..+=+=.=..+ |.- .-+..|+++|||+|.++.-|.
T Consensus 105 i~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~-Lt~eei~~a~~ia~~aGADfVKTSTGf~ 181 (239)
T 3ngj_A 105 VEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCY-LTNEEKVEVCKRCVAAGAEYVKTSTGFG 181 (239)
T ss_dssp HHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred HHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCC-CCHHHHHHHHHHHHHHCcCEEECCCCCC
Confidence 8889999998888886 445667777777777654322221111111 222 234456899999999997664
No 186
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=90.83 E-value=1.4 Score=41.79 Aligned_cols=146 Identities=13% Similarity=0.161 Sum_probs=89.1
Q ss_pred eEEEEeC-ChHhHHHHHHcCCCEEEEecC-Cch-HHHHhh-hcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC
Q 018252 196 RLPVLTP-NLKGFEAAIAAGAKEVAIFAS-ASE-AFSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE 271 (359)
Q Consensus 196 ~l~~l~~-n~~gie~a~~aGv~~V~i~~s-~S~-~~~~~n-~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~ 271 (359)
.+..++. +.-....+-++|++-|.+.-+ .+- .+-.-. .-.|.++.+..++.+.+.+ ...|.+.+ |++
T Consensus 18 ~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~---~~PviaD~------d~G 88 (295)
T 1xg4_A 18 PLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC---SLPLLVDA------DIG 88 (295)
T ss_dssp SEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC---CSCEEEEC------TTC
T ss_pred cEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC---CCCEEecC------Ccc
Confidence 3444443 323344455679998877432 111 111111 1247888888877776543 35554333 232
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC-----------CCcHHHHHHHHHHHHHhC--CCceEEEEeCC----CCCc
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVV--PVEKLAVHLHD----TYGQ 334 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~--p~~~L~~H~HN----d~GL 334 (359)
.-.+++.+.+.++++.++|+..|.|-|..+ +....+..+.|+++++.. ++..|-.-.-. .+--
T Consensus 89 yg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ 168 (295)
T 1xg4_A 89 FGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDA 168 (295)
T ss_dssp SSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHH
Confidence 234789999999999999999999999974 333455667777777654 33333333311 1134
Q ss_pred HHHHHHHHHHcCCCEE
Q 018252 335 SLPNILISLQVSPMHA 350 (359)
Q Consensus 335 AlANalaAv~AGa~~I 350 (359)
++.-+.+..+|||+.|
T Consensus 169 ai~ra~ay~eAGAd~i 184 (295)
T 1xg4_A 169 AIERAQAYVEAGAEML 184 (295)
T ss_dssp HHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHcCCCEE
Confidence 6788899999999976
No 187
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.80 E-value=5 Score=37.47 Aligned_cols=114 Identities=18% Similarity=0.153 Sum_probs=75.6
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+... ++|.+.+ +..+.++.+++++.+
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~gr-~pviaGv---------g~~~t~~ai~la~~a 92 (291)
T 3tak_A 28 VEWHIEQGTNSIVAVGTTGEAS-----TLSMEEHTQVIKEIIRVANKR-IPIIAGT---------GANSTREAIELTKAA 92 (291)
T ss_dssp HHHHHHHTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTTS-SCEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEECccccccc-----cCCHHHHHHHHHHHHHHhCCC-CeEEEeC---------CCCCHHHHHHHHHHH
Confidence 5566778999988877777754 346677777777777766532 5553222 234678888999999
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEEE-----eCCCCCcHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVH-----LHDTYGQSL 336 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H-----~HNd~GLAl 336 (359)
.++|+|.+-+. =..--.+++.+.+.++++.+..+ +||-++ .+.++...+
T Consensus 93 ~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~-lPiilYn~P~~tg~~l~~~~ 147 (291)
T 3tak_A 93 KDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVE-LPLILYNVPGRTGVDLSNDT 147 (291)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEECHHHHSCCCCHHH
T ss_pred HhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEecccccCCCCCHHH
Confidence 99999975543 33344567888888888888764 455543 344554444
No 188
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=90.78 E-value=4.1 Score=36.88 Aligned_cols=181 Identities=15% Similarity=0.057 Sum_probs=95.0
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEE--eCChHhHHHHHHcCCCEEEEecCCch
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL--TPNLKGFEAAIAAGAKEVAIFASASE 226 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l--~~n~~gie~a~~aGv~~V~i~~s~S~ 226 (359)
.-.++++.+.+.|++.|++.-....... .-.+.+. ++.+++..++.+.+. +.+..+++.++++|++.|.+-...-+
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~-~g~~~~~-i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~ 108 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYDTEM-IRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFHF 108 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCS-SCCCHHH-HHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC--
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCC-CcccHHH-HHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHHh
Confidence 5678999999999999999643211100 1123443 344444344444432 35668899999999998887533210
Q ss_pred HHHHhhhcCCHHHHHHHHHHHHHHHHhCC--C-cEEEEEee--------eecCCCCCC-CCHHHHHHHHHHHHHCCcCEE
Q 018252 227 AFSKSNINCSIEDSLVRYRAVAHAAKVLS--I-PVRGYVSC--------VVGCPVEGA-IPPSKVAYVAKELHDMGCFEI 294 (359)
Q Consensus 227 ~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G--~-~V~~~is~--------~fg~~~~~r-~~~e~l~~~a~~l~~~Gad~I 294 (359)
... ..+.++++ ++..| . .+...+.+ +.. .... .+.....++++.+.++|++.|
T Consensus 109 --~~~--------~~~~~~~~---~~~~g~~~~~i~~~~d~~~~~g~~~v~~--~g~~~~~~~~~~e~~~~~~~~G~~~i 173 (266)
T 2w6r_A 109 --REI--------DMRELKEY---LKKHGGSGQAVVVAIDAKRVDGEFMVFT--HSGKKNTGILLRDWVVEVEKRGAGEI 173 (266)
T ss_dssp --------------CHHHHHH---CC----CCCEEEEEEEEEEETTEEEEEE--TTTTEEEEEEHHHHHHHHHHTTCSEE
T ss_pred --CCC--------CHHHHHHH---HHHcCCCCCEEEEEEEEEecCCCEEEEE--CCCceecchhHHHHHHHHHHcCCCEE
Confidence 000 11222232 23334 2 22222221 000 0000 000124567778888999999
Q ss_pred EEcC--CCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEEec
Q 018252 295 SLGD--TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHAKP 352 (359)
Q Consensus 295 ~L~D--T~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~ID~ 352 (359)
.+-+ ..|...... .++++.+++..+ +|+-.= -|.. ..++..++++||+.|=+
T Consensus 174 ~~t~~~~~g~~~g~~-~~~i~~l~~~~~-ipvia~----GGI~~~ed~~~~~~~Gadgv~v 228 (266)
T 2w6r_A 174 LLTSIDRDGTKSGYD-TEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGADAALA 228 (266)
T ss_dssp EEEETTTTTTCSCCC-HHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHHTCSEEEE
T ss_pred EEEeecCCCCcCCCC-HHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHcCCHHHHc
Confidence 9854 335433222 456667777543 344432 3555 36777888889987643
No 189
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=90.77 E-value=13 Score=36.27 Aligned_cols=136 Identities=12% Similarity=0.055 Sum_probs=89.1
Q ss_pred HHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHH-hCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 208 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK-VLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 208 e~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak-~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
+.+.+-|+..+-+.. ++.+....-|.+.++.++.+.+.++.++ +.|+.++.-++ +. -..+++...+.++.+
T Consensus 103 ed~a~dgV~Y~Eirf--~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~--~~----R~~~~e~a~~~~~~a 174 (380)
T 4gxw_A 103 EDAAAHNVRHAEFFW--NPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPS--ID----REQDPDEAVAIVDWM 174 (380)
T ss_dssp HHHHTTTEEEEEEEE--CHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEE--EE----TTSCHHHHHHHHHHH
T ss_pred HHHHHCCCeEEEEEc--CHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEe--ec----CCCCHHHHHHHHHHH
Confidence 344455777665543 3333322357889999998888777664 46888776554 21 124788888888777
Q ss_pred HHC---CcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHH-cCCCEEecee
Q 018252 287 HDM---GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ-VSPMHAKPCF 354 (359)
Q Consensus 287 ~~~---Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~-AGa~~ID~tl 354 (359)
.+. |+--|.|+=.=....|..+.+.++..++. ++++.+|+=-. |....|...|++ .|+++|+=.+
T Consensus 175 ~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~--Gl~~t~HAGE~-~~p~~~i~~al~~lga~RIgHG~ 243 (380)
T 4gxw_A 175 KANRADEVAGIGIDYRENDRPPELFWKAYRDARAA--GFRTTAHAGEF-GMPWRNVETAVDLLHVDRVDHGY 243 (380)
T ss_dssp HHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHT--TCEEEEEESCT-TCCHHHHHHHHHTSCCSEEEECG
T ss_pred HHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHc--CCCeeeecccc-CCchHHHHHHHHHcCCcccccce
Confidence 655 45556664332345678888888887774 47899999764 333458888885 7999997443
No 190
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=90.77 E-value=4.3 Score=42.08 Aligned_cols=139 Identities=14% Similarity=0.028 Sum_probs=86.0
Q ss_pred HHHHHHcCCCEEEEecCC--------chHHH--HhhhcCCHHHHHHHHHHHHHHHHhC---CCcEEEEEeeeecCCCCCC
Q 018252 207 FEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL---SIPVRGYVSCVVGCPVEGA 273 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~--------S~~~~--~~n~~~t~~e~l~~i~~~i~~Ak~~---G~~V~~~is~~fg~~~~~r 273 (359)
.++|.++|.|.|.+..+- |+..+ ...+|-+.++-.+.+.++++.+|+. ++.+..-|+..- . ..+.
T Consensus 147 A~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~-~-~~~g 224 (671)
T 1ps9_A 147 AQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD-L-VEDG 224 (671)
T ss_dssp HHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC-C-STTC
T ss_pred HHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccc-c-CCCC
Confidence 456678999988875432 12111 1234666776677777777777764 344444555321 1 1234
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEc----CC----CCC-CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc-HHHHHHHHH
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLG----DT----IGV-GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISL 343 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~----DT----~G~-~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL-AlANalaAv 343 (359)
.+++...++++.+.++|+|-|.+. +. ... ..+....++++.+++.+. +++..= -|. ...++..++
T Consensus 225 ~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-iPvi~~----Ggi~~~~~a~~~l 299 (671)
T 1ps9_A 225 GTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVS-LPLVTT----NRINDPQVADDIL 299 (671)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCS-SCEEEC----SSCCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcC-ceEEEe----CCCCCHHHHHHHH
Confidence 678889999999999999988873 11 011 112233567788888764 455442 233 467888999
Q ss_pred HcC-CCEEec
Q 018252 344 QVS-PMHAKP 352 (359)
Q Consensus 344 ~AG-a~~ID~ 352 (359)
+.| ||.|-.
T Consensus 300 ~~g~aD~V~~ 309 (671)
T 1ps9_A 300 SRGDADMVSM 309 (671)
T ss_dssp HTTSCSEEEE
T ss_pred HcCCCCEEEe
Confidence 999 888753
No 191
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=90.66 E-value=7.5 Score=39.14 Aligned_cols=190 Identities=11% Similarity=0.063 Sum_probs=113.3
Q ss_pred CCCHHHHHHHHH-HHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc-CCCeEEEEeCChHhHH---HHHHcCCCEE
Q 018252 144 TVPTGVKVELIR-RLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKGFE---AAIAAGAKEV 218 (359)
Q Consensus 144 ~~~~~~k~~ia~-~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~-~~~~l~~l~~n~~gie---~a~~aGv~~V 218 (359)
.++..++..|.. ...+.|++.|-+.|.-++ .|..++.+.+.+. ..+.+.+-+.+.++++ ..+++ .|.|
T Consensus 178 ~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a------~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~-sDgI 250 (461)
T 3qtg_A 178 TPAEEDVEALKAISPIRDNIDYVAISLAKSC------KDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQC-SDYV 250 (461)
T ss_dssp SSCHHHHHHHHHHGGGGGGCCEEEECSCCSH------HHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHT-CSEE
T ss_pred CCCHHHHHHHHHHHHhhcCCCEEEecCCCCH------HHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHh-cccE
Confidence 355666666542 667889999877653222 4566666666543 4577777777776654 44444 5666
Q ss_pred EEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCC-CCCCCCHHHHHHHHHHHHHCCcCEEEEc
Q 018252 219 AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP-VEGAIPPSKVAYVAKELHDMGCFEISLG 297 (359)
Q Consensus 219 ~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~-~~~r~~~e~l~~~a~~l~~~Gad~I~L~ 297 (359)
.+- -.|. -.-...++.....+.+++.|+.+|..|... ++..-.- ...+-+..++.+++..+.+ |+|.|.|.
T Consensus 251 mVa--RGDL----gvei~~e~v~~~Qk~ii~~~~~~gkpvi~A-TQMLeSMi~~p~PTRAEvsDVanAV~d-GaDavMLS 322 (461)
T 3qtg_A 251 VVA--RGDL----GLHYGLDALPIVQRRIVHTSLKYGKPIAVA-TQLLDSMQSSPIPTRAEINDVFTTASM-GVDSLWLT 322 (461)
T ss_dssp EEE--HHHH----TTTSCTTTHHHHHHHHHHHHHHTTCCEEEE-SSSSGGGGTCSSCCHHHHHHHHHHHHT-TCSEEEEC
T ss_pred EEc--cccc----cccCCHHHHHHHHHHHHHHHHHhCCCEEEe-ccchHhhccCCCccHHHHHHHHHHHHh-CCcEEEEc
Confidence 552 1111 111234455666689999999999987321 1111000 1124567788899997776 99999997
Q ss_pred -CCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCC--cHHHHHHHHHHcCCC
Q 018252 298 -DTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG--QSLPNILISLQVSPM 348 (359)
Q Consensus 298 -DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~G--LAlANalaAv~AGa~ 348 (359)
.|.---.|.+..+.+..+.+......-.++...+.. .|.|...+|-..+|.
T Consensus 323 gETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~aia~aa~~~a~~~~a~ 376 (461)
T 3qtg_A 323 NETASGKYPLAAVSWLSRILMNVEYQIPQSPLLQNSRDRFAKGLVELAQDLGAN 376 (461)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHTCCCCCCCCCCCCSHHHHHHHHHHHHHHHHTCE
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHhhhhhccCCCCHHHHHHHHHHHHHHhcCCC
Confidence 677778999999998888876532111111111211 233444556667777
No 192
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=90.66 E-value=6 Score=37.22 Aligned_cols=104 Identities=14% Similarity=0.204 Sum_probs=68.6
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~-----~Ls~eEr~~v~~~~~~~~~g-rvpViaGv---------g~~~t~~ai~la~~A 103 (301)
T 1xky_A 39 VNYLIDNGTTAIVVGGTTGESP-----TLTSEEKVALYRHVVSVVDK-RVPVIAGT---------GSNNTHASIDLTKKA 103 (301)
T ss_dssp HHHHHHTTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CceEEeCC---------CCCCHHHHHHHHHHH
Confidence 4556678898888877777754 34667766666666666543 35553222 234667888889999
Q ss_pred HHCCcCEEEE-cCCCCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+ +=..-..+++.+.+.++++.+..+ +||-+
T Consensus 104 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiil 143 (301)
T 1xky_A 104 TEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTP-LPVML 143 (301)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCS-SCEEE
T ss_pred HhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 9999986544 333334577888888888887764 45444
No 193
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=90.62 E-value=6.4 Score=38.70 Aligned_cols=140 Identities=12% Similarity=0.008 Sum_probs=84.5
Q ss_pred HHHHHcCCCEEEEecCC--------chHHH--HhhhcCCHHHHHHHHHHHHHHHHhC-C-CcEEEEEeee-ecCCCCCCC
Q 018252 208 EAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-S-IPVRGYVSCV-VGCPVEGAI 274 (359)
Q Consensus 208 e~a~~aGv~~V~i~~s~--------S~~~~--~~n~~~t~~e~l~~i~~~i~~Ak~~-G-~~V~~~is~~-fg~~~~~r~ 274 (359)
++|.++|.|-|.|-..- |+..+ ...+|-+.++-.+.+.++++.+|+. | ..|.+-|+.. +........
T Consensus 178 ~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~ 257 (402)
T 2hsa_B 178 LNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSN 257 (402)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSC
T ss_pred HHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCC
Confidence 45677899988886532 23222 2235667776666677777777664 3 2555555532 110011234
Q ss_pred CHHHHHHHHHHHHHCC------cCEEEEcCCC--C-CCcH-------HHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHH
Q 018252 275 PPSKVAYVAKELHDMG------CFEISLGDTI--G-VGTP-------GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPN 338 (359)
Q Consensus 275 ~~e~l~~~a~~l~~~G------ad~I~L~DT~--G-~~~P-------~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlAN 338 (359)
+.+...++++.+.++| ++-|.+..-. + ...| ..-.++++.+++.++. +|-.=+ ++ ....
T Consensus 258 ~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~i-Pvi~~G--~i--~~~~ 332 (402)
T 2hsa_B 258 PLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQG-TFICSG--GY--TREL 332 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSS-CEEEES--SC--CHHH
T ss_pred CHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCC-CEEEeC--CC--CHHH
Confidence 5678899999999999 9988874311 0 0012 1235677888888763 444322 22 3577
Q ss_pred HHHHHHcC-CCEEec
Q 018252 339 ILISLQVS-PMHAKP 352 (359)
Q Consensus 339 alaAv~AG-a~~ID~ 352 (359)
+..+++.| ||.|-.
T Consensus 333 a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 333 GIEAVAQGDADLVSY 347 (402)
T ss_dssp HHHHHHTTSCSEEEE
T ss_pred HHHHHHCCCCceeee
Confidence 78899998 888754
No 194
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=90.60 E-value=8.7 Score=39.06 Aligned_cols=158 Identities=18% Similarity=0.194 Sum_probs=101.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh-cCCCeEEEEeCChHhHH---HHHHcCCCEEEE
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLPVLTPNLKGFE---AAIAAGAKEVAI 220 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~-~~~~~l~~l~~n~~gie---~a~~aGv~~V~i 220 (359)
++..++..| +...+.|++.|=+.|.-++ .|..++.+.+.+ ..++.+.+-+.+.++++ ..+++ .|.|.+
T Consensus 190 ltekD~~dl-~~~~~~~vD~i~~sfVr~a------~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~-sDgImV 261 (499)
T 3hqn_D 190 VSAKDRVDL-QFGVEQGVDMIFASFIRSA------EQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEE-SDGIMV 261 (499)
T ss_dssp SCHHHHHHH-HHHHHTTCSEEEETTCCSH------HHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHH-SSEEEE
T ss_pred CCHHHHHHH-HHHHHcCCCEEEecCCCCH------HHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHh-CCcEEE
Confidence 455666555 7778899999877653221 455666666653 35678888887776654 33443 465555
Q ss_pred ecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCCCCCHHHHHHHHHHHHHCCcCEEEE-cC
Q 018252 221 FASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-PVEGAIPPSKVAYVAKELHDMGCFEISL-GD 298 (359)
Q Consensus 221 ~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-~~~~r~~~e~l~~~a~~l~~~Gad~I~L-~D 298 (359)
- --|+- .-...++.....+.++..|+.+|..|... ++..-. -...+-+..++.+++.++.+ |+|.|.| +.
T Consensus 262 a--RGDLg----vEi~~e~vp~~Qk~iI~~c~~agkpVi~A-TQmLeSMi~~p~PTRAEvsDVanaV~d-G~DavMLSgE 333 (499)
T 3hqn_D 262 A--RGDLG----VEIPAEKVVVAQKILISKCNVAGKPVICA-TQMLESMTYNPRPTRAEVSDVANAVFN-GADCVMLSGE 333 (499)
T ss_dssp E--HHHHH----HHSCHHHHHHHHHHHHHHHHHHTCCEEEE-SSSSGGGGTSSSCCHHHHHHHHHHHHH-TCSEEEESHH
T ss_pred c--ccccc----CcCCHHHHHHHHHHHHHHHHHcCCCeEEe-ehhHHHhccCCCccHHHHHHHHHHHHc-CCcEEEEecc
Confidence 2 22221 12345666777789999999999987321 100000 01224577888999998887 9999999 56
Q ss_pred CCCCCcHHHHHHHHHHHHHh
Q 018252 299 TIGVGTPGTVVPMLEAVMAV 318 (359)
Q Consensus 299 T~G~~~P~~v~~lv~~l~~~ 318 (359)
|.---.|.+..+.+..+.+.
T Consensus 334 TA~G~yPveaV~~m~~I~~~ 353 (499)
T 3hqn_D 334 TAKGKYPNEVVQYMARICLE 353 (499)
T ss_dssp HHTCSCHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHH
Confidence 77777898888877766643
No 195
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=90.57 E-value=3.5 Score=40.27 Aligned_cols=137 Identities=12% Similarity=-0.011 Sum_probs=84.3
Q ss_pred HHHHH-HcCCCEEEEecCC--------chHHHH---hhhcC-CHHHHHHHHHHHHHHHHhC-CC-cEEEEEee-eecCCC
Q 018252 207 FEAAI-AAGAKEVAIFASA--------SEAFSK---SNINC-SIEDSLVRYRAVAHAAKVL-SI-PVRGYVSC-VVGCPV 270 (359)
Q Consensus 207 ie~a~-~aGv~~V~i~~s~--------S~~~~~---~n~~~-t~~e~l~~i~~~i~~Ak~~-G~-~V~~~is~-~fg~~~ 270 (359)
.++|. ++|.|.|.+-..- |+..++ ..+|- +.++-.+.+.++++.+|+. |- .|.+-|+. .+....
T Consensus 180 A~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~~ 259 (379)
T 3aty_A 180 AKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHGM 259 (379)
T ss_dssp HHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGC
T ss_pred HHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcccccccC
Confidence 45678 8999988876542 222111 23454 7776677777777777664 42 35444442 110001
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEcCCC--CCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-C
Q 018252 271 EGAIPPSKVAYVAKELHDMGCFEISLGDTI--GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS-P 347 (359)
Q Consensus 271 ~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~--G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG-a 347 (359)
.+..+.+...++++.+.++|++-|.+.-.. +...|. + ++.+++.++ ++|..=.- + ....+..+++.| |
T Consensus 260 ~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~---~-~~~ir~~~~-iPvi~~G~--i--t~~~a~~~l~~g~a 330 (379)
T 3aty_A 260 IDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD---V-VAWVRGSYS-GVKISNLR--Y--DFEEADQQIREGKV 330 (379)
T ss_dssp CCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC---H-HHHHHTTCC-SCEEEESS--C--CHHHHHHHHHTTSC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH---H-HHHHHHHCC-CcEEEECC--C--CHHHHHHHHHcCCC
Confidence 234577889999999999999988886521 111233 5 778888875 35444222 2 367888999998 8
Q ss_pred CEEec
Q 018252 348 MHAKP 352 (359)
Q Consensus 348 ~~ID~ 352 (359)
|.|-.
T Consensus 331 D~V~i 335 (379)
T 3aty_A 331 DAVAF 335 (379)
T ss_dssp SEEEE
T ss_pred eEEEe
Confidence 88753
No 196
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=90.54 E-value=4.7 Score=38.26 Aligned_cols=158 Identities=12% Similarity=0.117 Sum_probs=89.5
Q ss_pred HHHHHHHHhCCC-CEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCC--eEEEEe--CCh-HhHHHHHHcCCCEEEEecCC
Q 018252 151 VELIRRLVSSGL-PVVEATSFVSPKWVPQLADARDVMEAVRDLEGA--RLPVLT--PNL-KGFEAAIAAGAKEVAIFASA 224 (359)
Q Consensus 151 ~~ia~~L~~aGv-~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~--~l~~l~--~n~-~gie~a~~aGv~~V~i~~s~ 224 (359)
.+++..+.++|. ..|..++ .++ ....+..+.+++..+. -+..++ +.. +.++.++++|++.|.+....
T Consensus 26 ~~la~av~~aG~lG~i~~~~-~~~------~~~~~~i~~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~ 98 (332)
T 2z6i_A 26 GDLAGAVSKAGGLGIIGGGN-APK------EVVKANIDKIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN 98 (332)
T ss_dssp HHHHHHHHHHTSBEEEECTT-CCH------HHHHHHHHHHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHhCCCcEEeCCCC-CCH------HHHHHHHHHHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC
Confidence 456777888885 5554432 111 1112223333333222 222333 333 55888999999999875431
Q ss_pred chHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC--CCCC
Q 018252 225 SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD--TIGV 302 (359)
Q Consensus 225 S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~D--T~G~ 302 (359)
. .++++.+++.|+++...+ .++ +.++.+.+.|+|.|.+-. +-|.
T Consensus 99 p-------------------~~~i~~l~~~g~~v~~~v-----------~~~----~~a~~~~~~GaD~i~v~g~~~GG~ 144 (332)
T 2z6i_A 99 P-------------------SKYMERFHEAGIIVIPVV-----------PSV----ALAKRMEKIGADAVIAEGMEAGGH 144 (332)
T ss_dssp G-------------------GGTHHHHHHTTCEEEEEE-----------SSH----HHHHHHHHTTCSCEEEECTTSSEE
T ss_pred h-------------------HHHHHHHHHcCCeEEEEe-----------CCH----HHHHHHHHcCCCEEEEECCCCCCC
Confidence 1 123455566788774332 233 346677889999988832 2222
Q ss_pred -CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEEeceee
Q 018252 303 -GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 303 -~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~ID~tl~ 355 (359)
..+. ..+++..+++.+. +|+-.= -|.. -.|+.+++.+||+.|...-.
T Consensus 145 ~g~~~-~~~ll~~i~~~~~-iPViaa----GGI~~~~~~~~al~~GAdgV~vGs~ 193 (332)
T 2z6i_A 145 IGKLT-TMTLVRQVATAIS-IPVIAA----GGIADGEGAAAGFMLGAEAVQVGTR 193 (332)
T ss_dssp CCSSC-HHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CCCcc-HHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCCCEEEecHH
Confidence 1222 3377788887654 455443 3444 46888889999999986533
No 197
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=90.49 E-value=4.2 Score=41.60 Aligned_cols=160 Identities=14% Similarity=0.191 Sum_probs=102.0
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc-CCCeEEEEeCChHhHHH---HHHcCCCEEE
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKGFEA---AIAAGAKEVA 219 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~-~~~~l~~l~~n~~gie~---a~~aGv~~V~ 219 (359)
.++..++..|.+.-.+.|+|.|=+.| +.. -.|..++.+.+.+. ..+.+.+-+.+.+++++ .+++ .|.|.
T Consensus 213 ~lTekD~~dl~~f~~~~~vD~Ia~SF-Vr~-----a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~-sDGIM 285 (520)
T 3khd_A 213 IISEKDKNDILNFAIPMGCNFIAASF-IQS-----ADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAE-SDGIM 285 (520)
T ss_dssp SSCHHHHHHHHHTHHHHTCCEEEETT-CCS-----HHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHH-SSCEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECC-CCC-----HHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHh-CCcEE
Confidence 46777888887888889999987765 331 14556666666543 46778888877766543 3433 35454
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCCCCCHHHHHHHHHHHHHCCcCEEEE-c
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-PVEGAIPPSKVAYVAKELHDMGCFEISL-G 297 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-~~~~r~~~e~l~~~a~~l~~~Gad~I~L-~ 297 (359)
+- --|. -.-...++....-+.++..|+++|..|... ++..-. -...+-+..++.+++.++.+ |+|.|.| +
T Consensus 286 VA--RGDL----gvEi~~e~vp~~Qk~iI~~c~~aGKPVi~A-TQMLeSMi~~p~PTRAEvsDVanAVld-GaDavMLSg 357 (520)
T 3khd_A 286 IA--RGDL----GMEISPEKVFLAQKLMISKCNLQGKPIITA-TQMLESMTKNPRPTRAEVTDVANAVLD-GTDCVMLSG 357 (520)
T ss_dssp EC--HHHH----TTTSCGGGHHHHHHHHHHHHHHHTCCEEEC-CCCCGGGGTCSSCCHHHHHHHHHHHHH-TCSEEEESH
T ss_pred Ec--cccc----cccCCHHHHHHHHHHHHHHHHHcCCCeEEe-ehhhHHHhcCCCccHHHHHHHHHHHHh-CCCEEEecc
Confidence 42 1111 111233455555688999999999987311 100000 01224577888999998887 9999999 4
Q ss_pred CCCCCCcHHHHHHHHHHHHHh
Q 018252 298 DTIGVGTPGTVVPMLEAVMAV 318 (359)
Q Consensus 298 DT~G~~~P~~v~~lv~~l~~~ 318 (359)
.|+---.|.+..+.+..+...
T Consensus 358 ETA~G~yPveaV~~M~~I~~~ 378 (520)
T 3khd_A 358 ETAGGKFPVEAVTIMSKICLE 378 (520)
T ss_dssp HHHSCSCHHHHHHHHHHHHHH
T ss_pred cccCCcCHHHHHHHHHHHHHH
Confidence 677777898888888777654
No 198
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=90.46 E-value=1.6 Score=41.74 Aligned_cols=91 Identities=11% Similarity=0.038 Sum_probs=61.7
Q ss_pred HHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCC--cCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCce
Q 018252 246 AVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG--CFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEK 323 (359)
Q Consensus 246 ~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~G--ad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~ 323 (359)
+.++.+++.|+.+.+. ++ ..++. .+.++.+.++| ++.|.+ |+ +...|....+.++.+++.++..+
T Consensus 85 ~~i~~~~~~g~~v~v~----~g------~~~~~-~~~a~~~~~~g~~~~~i~i-~~-~~G~~~~~~~~i~~lr~~~~~~~ 151 (336)
T 1ypf_A 85 SFIRDMQSRGLIASIS----VG------VKEDE-YEFVQQLAAEHLTPEYITI-DI-AHGHSNAVINMIQHIKKHLPESF 151 (336)
T ss_dssp HHHHHHHHTTCCCEEE----EC------CSHHH-HHHHHHHHHTTCCCSEEEE-EC-SSCCSHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHhcCCeEEEe----CC------CCHHH-HHHHHHHHhcCCCCCEEEE-EC-CCCCcHHHHHHHHHHHHhCCCCE
Confidence 3355566677755332 22 23443 35678889999 888766 33 22378889999999999987544
Q ss_pred EEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 324 LAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 324 L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
+. .. ..+....+..|+++||+.|.++
T Consensus 152 vi-~G---~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 152 VI-AG---NVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp EE-EE---EECSHHHHHHHHHHTCSEEEEC
T ss_pred EE-EC---CcCCHHHHHHHHHcCCCEEEEe
Confidence 44 22 1245688999999999999884
No 199
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=90.44 E-value=2 Score=40.39 Aligned_cols=76 Identities=11% Similarity=0.063 Sum_probs=50.9
Q ss_pred CCCCC-CHHHHHHHHHHHHHCCcCEEEEcC-CC--C---CCcHHHHHHHH---HHHHHhCCCceEEEEeCCCCCcHHHHH
Q 018252 270 VEGAI-PPSKVAYVAKELHDMGCFEISLGD-TI--G---VGTPGTVVPML---EAVMAVVPVEKLAVHLHDTYGQSLPNI 339 (359)
Q Consensus 270 ~~~r~-~~e~l~~~a~~l~~~Gad~I~L~D-T~--G---~~~P~~v~~lv---~~l~~~~p~~~L~~H~HNd~GLAlANa 339 (359)
+++++ +++...+.++++.+.|||.|-++= +. | +...+++.+++ +.+++. +++|.++..+ ..-+
T Consensus 21 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT~~-----~~va 93 (280)
T 1eye_A 21 DGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDTMR-----ADVA 93 (280)
T ss_dssp SSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEECSC-----HHHH
T ss_pred CCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeCCC-----HHHH
Confidence 45664 899999999999999999988872 21 1 22234555554 444443 5789998765 3556
Q ss_pred HHHHHcCCCEEec
Q 018252 340 LISLQVSPMHAKP 352 (359)
Q Consensus 340 laAv~AGa~~ID~ 352 (359)
.+|+++|+++|+-
T Consensus 94 ~aAl~aGa~iINd 106 (280)
T 1eye_A 94 RAALQNGAQMVND 106 (280)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 6899999999963
No 200
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=90.41 E-value=4.3 Score=38.45 Aligned_cols=125 Identities=15% Similarity=0.086 Sum_probs=77.6
Q ss_pred HHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHH
Q 018252 208 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELH 287 (359)
Q Consensus 208 e~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~ 287 (359)
+.|.+.|+..|.+. +.|.. .+.+..+..+++| +.+.+.|. +..+.+--+.-++.+.
T Consensus 81 ~eA~~~g~aaVCV~----P~~V~---------------~a~~~L~~s~V~V----~tVigFP~-G~~~~~~Kv~Ea~~Ai 136 (288)
T 3oa3_A 81 AEAKEYGFATVCVR----PDYVS---------------RAVQYLQGTQVGV----TCVIGFHE-GTYSTDQKVSEAKRAM 136 (288)
T ss_dssp HHHHHHTCSEEEEC----GGGHH---------------HHHHHTTTSSCEE----EEEESTTT-SCSCHHHHHHHHHHHH
T ss_pred HHHHhcCCcEEEEC----HHHHH---------------HHHHHcCCCCCeE----EEEeCCCC-CCCcHHHHHHHHHHHH
Confidence 45566788887774 22211 2222223345555 33455665 4555566666677888
Q ss_pred HCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCCC--c--eEEEEeCCCCCcHHHHHHHHHHcCCCEEeceeeec
Q 018252 288 DMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPV--E--KLAVHLHDTYGQSLPNILISLQVSPMHAKPCFTFA 357 (359)
Q Consensus 288 ~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~--~--~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~~~ 357 (359)
+.|||+|.+.=-+|. ..-..+.+-++++++..+. + .|+--..++--.. .-+..|+++|||+|-++--|.
T Consensus 137 ~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~-~A~~ia~eaGADfVKTSTGf~ 212 (288)
T 3oa3_A 137 QNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEII-AGCVLSSLAGADYVKTSTGFN 212 (288)
T ss_dssp HTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHH-HHHHHHHHTTCSEEECCCSSS
T ss_pred HcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHH-HHHHHHHHcCCCEEEcCCCCC
Confidence 899999998877887 4557788888888887532 2 2333333333333 237788999999999995553
No 201
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=90.38 E-value=1.2 Score=41.64 Aligned_cols=67 Identities=18% Similarity=0.255 Sum_probs=44.6
Q ss_pred CCCeEEEEe-CChHhHHHHHHcCCCEEEEecC-CchHHHH--hhh----------cC-------CHHHHHHHHHHHHHHH
Q 018252 193 EGARLPVLT-PNLKGFEAAIAAGAKEVAIFAS-ASEAFSK--SNI----------NC-------SIEDSLVRYRAVAHAA 251 (359)
Q Consensus 193 ~~~~l~~l~-~n~~gie~a~~aGv~~V~i~~s-~S~~~~~--~n~----------~~-------t~~e~l~~i~~~i~~A 251 (359)
.+++++.++ |..++++.|.+.|++.|-+.+. -.+.+.. .|+ .. ..++.++++..++++|
T Consensus 123 ~GIrVSLFIDpd~~qi~aA~~~GAd~IELhTG~YA~a~~~~~sn~~~~~~~~~~l~~~~~~~~~~~~~el~~l~~aA~~A 202 (260)
T 3o6c_A 123 ANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYANLHNALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKG 202 (260)
T ss_dssp TTCEEEEEECSCHHHHHHHHHTTCSEEEECCHHHHHHHHHHHSSGGGSTTCCGGGCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHhCCCEEEEechHhhhhhhccccccccccccccccccccchhhHHHHHHHHHHHHHHHHH
Confidence 455555555 4567899999999999999753 1122210 111 11 1345788999999999
Q ss_pred HhCCCcEE
Q 018252 252 KVLSIPVR 259 (359)
Q Consensus 252 k~~G~~V~ 259 (359)
+++|+.|.
T Consensus 203 ~~lGL~Vn 210 (260)
T 3o6c_A 203 LELGLKVA 210 (260)
T ss_dssp HHTTCEEE
T ss_pred HHcCCEEe
Confidence 99999984
No 202
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=90.38 E-value=0.85 Score=43.34 Aligned_cols=81 Identities=11% Similarity=0.023 Sum_probs=70.0
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhC-CCceEEEE-eCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVV-PVEKLAVH-LHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~L~~H-~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++=|.|= +++++-.++++.+.+.. +.+++-+| ++|+.--++..+..|-++|
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 103 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLG 103 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999999995 57888888888888865 44778877 6788999999999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.+=+
T Consensus 104 adavlv 109 (309)
T 3fkr_A 104 AAMVMA 109 (309)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 988754
No 203
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=90.36 E-value=6.5 Score=36.74 Aligned_cols=118 Identities=11% Similarity=0.048 Sum_probs=68.6
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~A 91 (294)
T 2ehh_A 27 IEFHVDNGTDAILVCGTTGESP-----TLTFEEHEKVIEFAVKRAAG-RIKVIAGT---------GGNATHEAVHLTAHA 91 (294)
T ss_dssp HHHHHTTTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHH
Confidence 4555667888877777666654 34566666666666655542 24442211 234567778888888
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE-E----eCCCCCcHHHHHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV-H----LHDTYGQSLPNIL 340 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H----~HNd~GLAlANal 340 (359)
.++|+|.+-+. =..-..+++.+.+.++++.+..+ +||-+ | .+.++...+-.-|
T Consensus 92 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P~~tg~~l~~~~~~~L 150 (294)
T 2ehh_A 92 KEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVD-IPIIIYNIPSRTCVEISVDTMFKL 150 (294)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCCcccCcCCCHHHHHHH
Confidence 88888865443 22333466777777777777654 34443 3 2444544443333
No 204
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=90.36 E-value=0.89 Score=42.97 Aligned_cols=81 Identities=11% Similarity=-0.002 Sum_probs=69.2
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCC--CceEEEEe-CCCCCcHHHHHHHHHHc
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP--VEKLAVHL-HDTYGQSLPNILISLQV 345 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p--~~~L~~H~-HNd~GLAlANalaAv~A 345 (359)
+..|.+.+.++++.+.+.|++-|.++-|.|= ++.++-.++++.+.+... .+++-+|. +|+.--++..+..|-++
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~ 102 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEH 102 (301)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999995 578888888988888764 36777764 68888899999999999
Q ss_pred CCCEEec
Q 018252 346 SPMHAKP 352 (359)
Q Consensus 346 Ga~~ID~ 352 (359)
||+.|=.
T Consensus 103 Gadavlv 109 (301)
T 3m5v_A 103 GADGILS 109 (301)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9987744
No 205
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=90.31 E-value=4.2 Score=38.62 Aligned_cols=118 Identities=14% Similarity=0.018 Sum_probs=79.1
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-|-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 51 v~~li~~Gv~Gi~v~GtTGE~~-----~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~~t~~ai~la~~A 115 (315)
T 3na8_A 51 IERLIDGGVHAIAPLGSTGEGA-----YLSDPEWDEVVDFTLKTVAH-RVPTIVSV---------SDLTTAKTVRRAQFA 115 (315)
T ss_dssp HHHHHHTTCSEEECSSGGGTGG-----GSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHH
Confidence 4566778999988877777754 35677777777777776653 25553222 244678899999999
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE-E----eCCCCCcHHHHHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV-H----LHDTYGQSLPNIL 340 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H----~HNd~GLAlANal 340 (359)
.++|+|.+-+. =..--.+++.+.+.++++.+..+ +||-+ | .+.++...+-.-|
T Consensus 116 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 116 ESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIG-VPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp HHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CcEEEEeCcchhCcCCCHHHHHHH
Confidence 99999976554 33345578889999999988875 45544 3 3455554444433
No 206
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=90.28 E-value=2.2 Score=42.54 Aligned_cols=142 Identities=18% Similarity=0.063 Sum_probs=86.7
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHH--HHHHHHHHHHHhCCCc--EEEEEeeeecCC---------CC
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL--VRYRAVAHAAKVLSIP--VRGYVSCVVGCP---------VE 271 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l--~~i~~~i~~Ak~~G~~--V~~~is~~fg~~---------~~ 271 (359)
+.+..++++|...|++=.|.+.. . .+...++.+ ++.++++++|++. .. +.+.|..+.|.+ ..
T Consensus 108 e~i~~aI~aGFtSVMiD~S~~~~--~--~~~pl~eNi~~~rt~elv~~Ah~~-~~~~~eaElG~vgG~Ev~v~~~~~~~~ 182 (420)
T 2fiq_A 108 ELVKAYVRAGFSKIHLDASMSCA--G--DPIPLAPETVAERAAVLCFAAESV-ATDCQREQLSYVIGTEVPVPGGEASAI 182 (420)
T ss_dssp HHHHHHHHTTCCEEEECCCSCCB--T--CCSSCCHHHHHHHHHHHHHHHHHH-CCHHHHHHCEEEEECSSCC--------
T ss_pred HHHHHHHHhCCCEEEECCCCCCC--C--CCCCccHHHHHHHHHHHHHHHHHH-cccCCcccceEEeeeecCCCCCccccc
Confidence 45888999999999985443100 0 012223333 3467888888876 32 111111112222 01
Q ss_pred -C--CCCHHHHHHHHH----HHHHCCcCE-----EEEcCCCCCC-----cHHHHHHHHHHHHHhCCCce-EEEEeCCCCC
Q 018252 272 -G--AIPPSKVAYVAK----ELHDMGCFE-----ISLGDTIGVG-----TPGTVVPMLEAVMAVVPVEK-LAVHLHDTYG 333 (359)
Q Consensus 272 -~--r~~~e~l~~~a~----~l~~~Gad~-----I~L~DT~G~~-----~P~~v~~lv~~l~~~~p~~~-L~~H~HNd~G 333 (359)
+ .++|+...++++ .+.+.|+|. |.|+=.+|.. .|.-=.+.++.|++.++. + |.+-.|.+-|
T Consensus 183 ~~~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~I~~~v~~-P~LVle~HGgSg 261 (420)
T 2fiq_A 183 QSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQALAQWIEN-TRMVYEAHSTDY 261 (420)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECCCGGGGHHHHHHHTT-SSCEEEESCCTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCcCHHHHHHHHHhcCC-CCEEEecCCCCC
Confidence 2 589999999998 777889875 4365444431 222222344455555442 5 7877799999
Q ss_pred cHHHHHHHHHHcCCCEEec
Q 018252 334 QSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 334 LAlANalaAv~AGa~~ID~ 352 (359)
+.-.+...+++.|+..|.+
T Consensus 262 ~~~e~l~~~v~~Gi~kiNV 280 (420)
T 2fiq_A 262 QTRTAYWELVRDHFAILKV 280 (420)
T ss_dssp CCHHHHHHHHHTTEEEEEE
T ss_pred CCHHHHHHHHHcCCCEEEE
Confidence 9999999999999999873
No 207
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=90.24 E-value=12 Score=34.96 Aligned_cols=197 Identities=11% Similarity=0.066 Sum_probs=118.1
Q ss_pred CccEEEeCCCcccCCCCCCCC---CHHHHHHHHHHHHhCCCCEEEEec--cCCCCCcCCCCCHHHHHHH---hhhc-CCC
Q 018252 125 RFVKIVEVGPRDGLQNEKNTV---PTGVKVELIRRLVSSGLPVVEATS--FVSPKWVPQLADARDVMEA---VRDL-EGA 195 (359)
Q Consensus 125 ~~V~I~D~TLRDG~Q~~~~~~---~~~~k~~ia~~L~~aGv~~IEvG~--fvspk~vPq~~D~~ev~~~---l~~~-~~~ 195 (359)
+.|+|-++++=.|.-..-..+ +.++.++.++.+...|.|.||+=. +..+ .+.+++.+. ++.. .+.
T Consensus 26 ~~v~v~~~~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~------~~~~~v~~~l~~lr~~~~~~ 99 (276)
T 3o1n_A 26 KTVTVRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANV------TTAESVLEAAGAIREIITDK 99 (276)
T ss_dssp CCEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTT------TCHHHHHHHHHHHHHHCCSS
T ss_pred eEEEECCEEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEecccccc------CcHHHHHHHHHHHHHhcCCC
Confidence 457888888888754443222 356667777777789999999964 3221 233444444 4433 356
Q ss_pred eEEEEeCCh-H-------------hHHHHHHcC-CCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEE
Q 018252 196 RLPVLTPNL-K-------------GFEAAIAAG-AKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRG 260 (359)
Q Consensus 196 ~l~~l~~n~-~-------------gie~a~~aG-v~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~ 260 (359)
.+..-+|.. + -++.+++.| ++.|.+-....+ +.+.++++.|++.|.++.+
T Consensus 100 PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~---------------~~~~~l~~~a~~~~~kvI~ 164 (276)
T 3o1n_A 100 PLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGD---------------DEVKATVGYAHQHNVAVIM 164 (276)
T ss_dssp CEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGGCH---------------HHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcCCH---------------HHHHHHHHHHHhCCCEEEE
Confidence 666655521 1 245677788 898888543221 2345677888888988854
Q ss_pred EEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHH---hCCCceEEEEeCCCCCcHHH
Q 018252 261 YVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMA---VVPVEKLAVHLHDTYGQSLP 337 (359)
Q Consensus 261 ~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~---~~p~~~L~~H~HNd~GLAlA 337 (359)
.. +.|. . .-+.+.+.+..+++.+.|||.+-|+=+. -++.++..++.+..+ ..+..|+-.-. .=.+|.-
T Consensus 165 S~-Hdf~---~-tP~~~el~~~~~~~~~~GaDIvKia~~a--~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~--MG~~G~~ 235 (276)
T 3o1n_A 165 SN-HDFH---K-TPAAEEIVQRLRKMQELGADIPKIAVMP--QTKADVLTLLTATVEMQERYADRPIITMS--MSKTGVI 235 (276)
T ss_dssp EE-EESS---C-CCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCCSCCEEEE--CSGGGTH
T ss_pred Ee-ecCC---C-CcCHHHHHHHHHHHHHcCCCEEEEEecC--CChHHHHHHHHHHHHHHhcCCCCCEEEEE--CCCchhh
Confidence 33 2232 1 2246789999999999999999988553 467788888776543 23444444322 2223333
Q ss_pred HHHHHHHcCCCEEe
Q 018252 338 NILISLQVSPMHAK 351 (359)
Q Consensus 338 NalaAv~AGa~~ID 351 (359)
.-+.+-..|--...
T Consensus 236 SRi~~~~~GS~vTf 249 (276)
T 3o1n_A 236 SRLAGEVFGSAATF 249 (276)
T ss_dssp HHHCHHHHTCCEEE
T ss_pred HHHHHHHhCCceEe
Confidence 33444444444333
No 208
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=90.24 E-value=2.2 Score=42.14 Aligned_cols=125 Identities=13% Similarity=0.190 Sum_probs=73.4
Q ss_pred HHHHHHHHhCCCCEEEEec-cCCCCCcCCCCCHHHHHHHhhhcCCCeEEE-EeCChHhHHHHHHcCCCEEEEecCCchHH
Q 018252 151 VELIRRLVSSGLPVVEATS-FVSPKWVPQLADARDVMEAVRDLEGARLPV-LTPNLKGFEAAIAAGAKEVAIFASASEAF 228 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~-fvspk~vPq~~D~~ev~~~l~~~~~~~l~~-l~~n~~gie~a~~aGv~~V~i~~s~S~~~ 228 (359)
.+.++.|.++|++.|++.+ +..| ....+.++.+++.-++.+.+ -+.+.+..+.+.++|+|-|.+....-..+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~------~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~ 219 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHS------LNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSIC 219 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSB------HHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTTCSEEEECC------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCc------ccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcCCCEEEEeCCCCcCc
Confidence 6889999999999999854 2222 11223344444433566653 56678899999999999988732110111
Q ss_pred HHh---hhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc
Q 018252 229 SKS---NINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG 297 (359)
Q Consensus 229 ~~~---n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~ 297 (359)
... ..+.. .+..+.++.+.+++.+++|.+ +++-.+++.+.+ +.++||+.|.+.
T Consensus 220 ~tr~~~g~g~p---~~~al~~v~~~~~~~~IPVIA---------~GGI~~~~di~k----alalGAd~V~vG 275 (400)
T 3ffs_A 220 TTRIVAGVGVP---QITAIEKCSSVASKFGIPIIA---------DGGIRYSGDIGK----ALAVGASSVMIG 275 (400)
T ss_dssp ---CCSCBCCC---HHHHHHHHHHHHTTTTCCEEE---------ESCCCSHHHHHH----HHTTTCSEEEEC
T ss_pred ccccccccchh---HHHHHHHHHHHHHhcCCCEEe---------cCCCCCHHHHHH----HHHcCCCEEEEC
Confidence 111 11222 245556666666667787732 345567766444 345799888765
No 209
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=90.14 E-value=1.1 Score=42.54 Aligned_cols=77 Identities=16% Similarity=0.162 Sum_probs=55.2
Q ss_pred CCCCC-CHHHHHHHHHHHHHCCcCEEEEcC-C-----CCCCcHHHHHHHH---HHHHHhCCCceEEEEeCCCCCcHHHHH
Q 018252 270 VEGAI-PPSKVAYVAKELHDMGCFEISLGD-T-----IGVGTPGTVVPML---EAVMAVVPVEKLAVHLHDTYGQSLPNI 339 (359)
Q Consensus 270 ~~~r~-~~e~l~~~a~~l~~~Gad~I~L~D-T-----~G~~~P~~v~~lv---~~l~~~~p~~~L~~H~HNd~GLAlANa 339 (359)
+++++ +++...+.++++.+.|||.|-+.= + ..+...+++.+++ +++++.+ +++|.+...+ ..-+
T Consensus 55 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT~~-----~~V~ 128 (297)
T 1tx2_A 55 DGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDTYK-----AEVA 128 (297)
T ss_dssp SSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEECSC-----HHHH
T ss_pred cCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeCCC-----HHHH
Confidence 34553 678899999999999999988873 2 2233456666555 6666665 4789997763 3556
Q ss_pred HHHHHcCCCEEec
Q 018252 340 LISLQVSPMHAKP 352 (359)
Q Consensus 340 laAv~AGa~~ID~ 352 (359)
.+|+++|+++|+-
T Consensus 129 ~aAl~aGa~iINd 141 (297)
T 1tx2_A 129 KQAIEAGAHIIND 141 (297)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 6888999999963
No 210
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=90.10 E-value=2 Score=40.31 Aligned_cols=135 Identities=14% Similarity=0.130 Sum_probs=86.9
Q ss_pred HHHHHHcCCCEEEEe-cCCchHHHHhhh-cCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIF-ASASEAFSKSNI-NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 207 ie~a~~aGv~~V~i~-~s~S~~~~~~n~-~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
...+-++|++-|.+. .+.+-.+-.-.. -.|.++.+..++.+.+.+ .+.|.+.+ |++.-.+++.+.+.++
T Consensus 29 A~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~---~~pviaD~------d~Gyg~~~~~~~~~v~ 99 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAV---AIPVNADI------EAGYGHAPEDVRRTVE 99 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHC---SSCEEEEC------TTCSSSSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhc---CCCEEeec------CCCCCCCHHHHHHHHH
Confidence 334445799988775 233322111111 257888888887776554 35664433 3322347899999999
Q ss_pred HHHHCCcCEEEEcCCCC-----CCcHHHHHHHHHHHHHhCC--CceEEEEeCCCC-------------CcHHHHHHHHHH
Q 018252 285 ELHDMGCFEISLGDTIG-----VGTPGTVVPMLEAVMAVVP--VEKLAVHLHDTY-------------GQSLPNILISLQ 344 (359)
Q Consensus 285 ~l~~~Gad~I~L~DT~G-----~~~P~~v~~lv~~l~~~~p--~~~L~~H~HNd~-------------GLAlANalaAv~ 344 (359)
++.++|+..|.|-|..+ +..++++.+.|+++++... ++++-+-.-.|- --++.-+.+-.+
T Consensus 100 ~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~e 179 (275)
T 2ze3_A 100 HFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYAD 179 (275)
T ss_dssp HHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHH
Confidence 99999999999999974 4556778888888887621 223333333332 235667778899
Q ss_pred cCCCEE
Q 018252 345 VSPMHA 350 (359)
Q Consensus 345 AGa~~I 350 (359)
|||+.|
T Consensus 180 AGAd~i 185 (275)
T 2ze3_A 180 AGADGI 185 (275)
T ss_dssp TTCSEE
T ss_pred CCCCEE
Confidence 999976
No 211
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=90.04 E-value=4.5 Score=40.81 Aligned_cols=130 Identities=16% Similarity=0.144 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh-cCCCeEEEE-eCChHhHHHHHHcCCCEEEEec-CC
Q 018252 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLPVL-TPNLKGFEAAIAAGAKEVAIFA-SA 224 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~-~~~~~l~~l-~~n~~gie~a~~aGv~~V~i~~-s~ 224 (359)
.+-.+.++.|.++|++.|++..- .+. .....+.++.+++ .++..+.+- +.+.++.+.+.++|++.|.+-. +.
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a-~g~----~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~G 302 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTA-HGH----SKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPG 302 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECS-CCS----BHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCS
T ss_pred cchHHHHHHHhhcccceEEeccc-CCc----chhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCC
Confidence 35577788999999999999852 111 1122334444443 456655443 5677889999999999988732 22
Q ss_pred ch--HHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC
Q 018252 225 SE--AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298 (359)
Q Consensus 225 S~--~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~D 298 (359)
+. .......+.. .+..+.++.+.+++.+++|.+ +++-.+++.+.+.. ++||+.+.+.=
T Consensus 303 s~~~t~~~~g~g~p---~~~~l~~v~~~~~~~~iPVIa---------~GGI~~~~di~kal----~~GAd~V~vGs 362 (490)
T 4avf_A 303 SICTTRIVAGVGVP---QISAIANVAAALEGTGVPLIA---------DGGIRFSGDLAKAM----VAGAYCVMMGS 362 (490)
T ss_dssp TTCHHHHHTCBCCC---HHHHHHHHHHHHTTTTCCEEE---------ESCCCSHHHHHHHH----HHTCSEEEECT
T ss_pred cCCCccccCCCCcc---HHHHHHHHHHHhccCCCcEEE---------eCCCCCHHHHHHHH----HcCCCeeeecH
Confidence 21 1111122222 345566777777777888732 34556777655543 46998887763
No 212
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=89.87 E-value=1.3 Score=42.01 Aligned_cols=81 Identities=12% Similarity=0.043 Sum_probs=70.0
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCC-CceEEEEe-CCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~L~~H~-HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++=|.|= ++.++-.++++.+.+... .+++-+|. +|+.--++..+..|-++|
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 109 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVG 109 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999996 678888999999888763 46766664 688888999999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.+=+
T Consensus 110 adavlv 115 (307)
T 3s5o_A 110 ADAAMV 115 (307)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 988754
No 213
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=89.86 E-value=1 Score=40.38 Aligned_cols=167 Identities=16% Similarity=0.092 Sum_probs=85.5
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe-------CCh-----------HhHHHHHHc
Q 018252 152 ELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-------PNL-----------KGFEAAIAA 213 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~-------~n~-----------~gie~a~~a 213 (359)
+.++.+.++|++.||+.... +.-.+.+++.+.+++. ++++.++. ++. +.++.|.+.
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~-----~~~~~~~~~~~~l~~~-gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~l 95 (275)
T 3qc0_A 22 EAVDICLKHGITAIAPWRDQ-----VAAIGLGEAGRIVRAN-GLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAEL 95 (275)
T ss_dssp HHHHHHHHTTCCEEECBHHH-----HHHHCHHHHHHHHHHH-TCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEecccc-----ccccCHHHHHHHHHHc-CCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 45566778999999997621 0013456666666532 33333222 121 124455667
Q ss_pred CCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee-cCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 214 GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV-GCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 214 Gv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~f-g~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
|++.|.+.....+.. ........+...+.+.++.++|++.|+++...-..-+ ..+...-.+++.+.++++.+-. .+
T Consensus 96 G~~~v~~~~g~~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~v- 172 (275)
T 3qc0_A 96 GADCLVLVAGGLPGG-SKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQALDICETLGP-GV- 172 (275)
T ss_dssp TCSCEEEECBCCCTT-CCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHHHHHHHHCT-TE-
T ss_pred CCCEEEEeeCCCCCC-CcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHHHHHHHHHHhCc-cc-
Confidence 999888865321100 0000011345667778888999999997632110000 0011123478888888877643 21
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHhCC-CceEEEEeCCC
Q 018252 293 EISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDT 331 (359)
Q Consensus 293 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd 331 (359)
=..-|+.=...-. +..+.+++..| +-...+|.+|.
T Consensus 173 -g~~~D~~h~~~~~---d~~~~l~~~~~~~~i~~vH~~D~ 208 (275)
T 3qc0_A 173 -GVAIDVYHVWWDP---DLANQIARAGKMKAILAHHICDW 208 (275)
T ss_dssp -EEEEEHHHHTTCT---THHHHHHHHHHTTCEEEEEECBC
T ss_pred -EEEEEhhhheeCC---CHHHHHHHcCccceEEEEEecCC
Confidence 1123433222212 23344444333 44678999993
No 214
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=89.84 E-value=6.7 Score=36.56 Aligned_cols=118 Identities=11% Similarity=0.039 Sum_probs=70.1
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a 91 (289)
T 2yxg_A 27 INFLIENGVSGIVAVGTTGESP-----TLSHEEHKKVIEKVVDVVNG-RVQVIAGA---------GSNCTEEAIELSVFA 91 (289)
T ss_dssp HHHHHHTTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHHHH
Confidence 4556677888887777766654 34566666666666665543 24442211 234567778888888
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE-E----eCCCCCcHHHHHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV-H----LHDTYGQSLPNIL 340 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H----~HNd~GLAlANal 340 (359)
.++|+|.+-+. =..-..+++.+.+.++++.+..+ +||-+ | .+.++...+-.-|
T Consensus 92 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~P~~tg~~l~~~~~~~L 150 (289)
T 2yxg_A 92 EDVGADAVLSITPYYNKPTQEGLRKHFGKVAESIN-LPIVLYNVPSRTAVNLEPKTVKLL 150 (289)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCccccCcCCCHHHHHHH
Confidence 88888865443 33333467778888887777654 45444 3 2445554443333
No 215
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=89.81 E-value=13 Score=37.48 Aligned_cols=160 Identities=13% Similarity=0.139 Sum_probs=93.5
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc--CCCeEEEEeCChHhHHH---HHHcCCCEE
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL--EGARLPVLTPNLKGFEA---AIAAGAKEV 218 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~--~~~~l~~l~~n~~gie~---a~~aGv~~V 218 (359)
.++..++..| +...+.|++.|=+-+ +.. .+|..++.+.+++. ..+.+.+.+.+.+++++ .+++ .|.|
T Consensus 169 ~ltekD~~Di-~~~l~~gvD~I~lsf-V~s-----aeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~-sDgI 240 (470)
T 1e0t_A 169 ALAEKDKQDL-IFGCEQGVDFVAASF-IRK-----RSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEA-SDGI 240 (470)
T ss_dssp SSCHHHHHHH-HHHHHHTCSEEEESS-CCS-----HHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHH-SSEE
T ss_pred CCCcCCHHHH-HHHHHcCCCEEEECC-CCC-----HHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHH-CCEE
Confidence 3556666665 566678999986654 321 14555566666543 35777777777766543 3333 4544
Q ss_pred EEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE-c
Q 018252 219 AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL-G 297 (359)
Q Consensus 219 ~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L-~ 297 (359)
.+ ...|+-.. ...++.....+.++..|+++|..+...=-+-=+--...+-+..++.+++.++.+ |+|.|.| +
T Consensus 241 mV--argDLgve----ig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~d-G~DavMLSg 313 (470)
T 1e0t_A 241 MV--ARGDLGVE----IPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILD-GTDAVMLSG 313 (470)
T ss_dssp EE--EHHHHHHH----SCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHH-TCSEEEECC
T ss_pred EE--CchHhhhh----cCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhc-CccEEEecc
Confidence 43 33333222 234566666788999999999987321100000001124467788999998887 9999999 5
Q ss_pred CCCCCCcHHHHHHHHHHHHHh
Q 018252 298 DTIGVGTPGTVVPMLEAVMAV 318 (359)
Q Consensus 298 DT~G~~~P~~v~~lv~~l~~~ 318 (359)
.|.---.|.+..+.+..+..+
T Consensus 314 ETA~G~yPveaV~~m~~I~~~ 334 (470)
T 1e0t_A 314 ESAKGKYPLEAVSIMATICER 334 (470)
T ss_dssp C------CHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHH
Confidence 677777898888887776654
No 216
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=89.76 E-value=5.4 Score=37.19 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=67.7
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+. | |. .|. +..+.++.+++++.+
T Consensus 25 v~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~~--g--vi------~Gv---g~~~t~~ai~la~~A 86 (286)
T 2r91_A 25 VKNITSKGVDVVFVAGTTGLGP-----ALSLQEKMELTDAATSAAR--R--VI------VQV---ASLNADEAIALAKYA 86 (286)
T ss_dssp HHHHHHTTCCEEEETSTTTTGG-----GSCHHHHHHHHHHHHHHCS--S--EE------EEC---CCSSHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhC--C--EE------Eee---CCCCHHHHHHHHHHH
Confidence 5666778999988887777754 3456666665555555543 3 32 221 245678888999999
Q ss_pred HHCCcCEEEEcCCC-CC-CcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLGDTI-GV-GTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~DT~-G~-~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+.=.. -- .+++.+.+.++++.+..+ +||-+
T Consensus 87 ~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPiil 127 (286)
T 2r91_A 87 ESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVS-IPVFL 127 (286)
T ss_dssp HHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCS-SCEEE
T ss_pred HhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 99999976664333 22 477888888888888764 45444
No 217
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=89.58 E-value=6.5 Score=37.14 Aligned_cols=99 Identities=15% Similarity=0.142 Sum_probs=57.8
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-+-+.-++.|.+ -.|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 35 v~~li~~Gv~gl~v~GtTGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~A 99 (309)
T 3fkr_A 35 VDFMIDAGSDGLCILANFSEQF-----AITDDERDVLTRTILEHVAG-RVPVIVTT---------SHYSTQVCAARSLRA 99 (309)
T ss_dssp HHHHHHTTCSCEEESSGGGTGG-----GSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccCcc-----cCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCchHHHHHHHHHHH
Confidence 4455667777777766665543 24556665555555555532 24442221 234556777777777
Q ss_pred HHCCcCEEEEcCCCC----CCcHHHHHHHHHHHHHhCC
Q 018252 287 HDMGCFEISLGDTIG----VGTPGTVVPMLEAVMAVVP 320 (359)
Q Consensus 287 ~~~Gad~I~L~DT~G----~~~P~~v~~lv~~l~~~~p 320 (359)
.++|+|.+-+.=..= -.+++.+.+.++++.+..+
T Consensus 100 ~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~ 137 (309)
T 3fkr_A 100 QQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIA 137 (309)
T ss_dssp HHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCS
T ss_pred HHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 777777665543331 2356777777777777653
No 218
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=89.53 E-value=6.3 Score=37.13 Aligned_cols=119 Identities=12% Similarity=0.040 Sum_probs=81.2
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-|-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 42 v~~li~~Gv~gi~v~GttGE~~-----~Lt~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~a 106 (304)
T 3l21_A 42 ANHLVDQGCDGLVVSGTTGESP-----TTTDGEKIELLRAVLEAVGD-RARVIAGA---------GTYDTAHSIRLAKAC 106 (304)
T ss_dssp HHHHHHTTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-TSEEEEEC---------CCSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCccccchh-----hCCHHHHHHHHHHHHHHhCC-CCeEEEeC---------CCCCHHHHHHHHHHH
Confidence 5566778999998888887765 35677777777777766643 35553222 245678899999999
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEEE-----eCCCCCcHHHHHHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVH-----LHDTYGQSLPNILI 341 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H-----~HNd~GLAlANala 341 (359)
.++|+|.+-+. =..-..+++.+.+.++++.+..+ +||-+. .+.++...+-.-|+
T Consensus 107 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P~~tg~~l~~~~~~~La 166 (304)
T 3l21_A 107 AAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATE-LPMLLYDIPGRSAVPIEPDTIRALA 166 (304)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCS-SCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCccccCCCCCHHHHHHHh
Confidence 99999975554 33344578889999999888774 565553 35666655544443
No 219
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=89.46 E-value=3.2 Score=41.60 Aligned_cols=196 Identities=14% Similarity=0.084 Sum_probs=101.0
Q ss_pred cEEEeCCC---cccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEec-cCCCCCcCCCCCHHHHHH---Hhh---h----c
Q 018252 127 VKIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATS-FVSPKWVPQLADARDVME---AVR---D----L 192 (359)
Q Consensus 127 V~I~D~TL---RDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~-fvspk~vPq~~D~~ev~~---~l~---~----~ 192 (359)
+=|+.+|+ =||. ++.+..++.++.+.+.|.++|+||. ...|.+.+ ....+|+.+ .++ . .
T Consensus 194 MGIlNvTPDSFsDgg------~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~-Vs~~EE~~Rv~pvI~~l~~~~~~~ 266 (442)
T 3mcm_A 194 MGIVNLSNQSFSDGN------FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKP-ISIEEEFNKLNEFLEYFKSQLANL 266 (442)
T ss_dssp EEEEECSSCC-CCCS------SCCCHHHHHHHHHHHHTCSEEEEECCCCCC-----CCHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEEEeCCCCCCCCCC------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-CCHHHHHHHHHHHHHHHHhhcccc
Confidence 34666665 3554 6778889999999999999999996 23343211 122233322 232 2 1
Q ss_pred C-CCeEEEEeCChHhHHHHHH--cCCCE-EEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC
Q 018252 193 E-GARLPVLTPNLKGFEAAIA--AGAKE-VAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC 268 (359)
Q Consensus 193 ~-~~~l~~l~~n~~gie~a~~--aGv~~-V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~ 268 (359)
+ ++.+++=+.+.+-++.|++ +|++. |+=.-. . .+ .++++.++++|..+. ++..-|.
T Consensus 267 ~~~vpISIDT~~~~VaeaAL~~~aGa~i~INDVsg---~---------~d------~~m~~v~a~~g~~vV--lMh~~G~ 326 (442)
T 3mcm_A 267 IYKPLVSIDTRKLEVMQKILAKHHDIIWMINDVEC---N---------NI------EQKAQLIAKYNKKYV--IIHNLGI 326 (442)
T ss_dssp SSCCEEEEECCCHHHHHHHHHHHGGGCCEEEECCC---T---------TH------HHHHHHHHHHTCEEE--EECC---
T ss_pred CCCCeEEEeCCCHHHHHHHHhhCCCCCEEEEcCCC---C---------CC------hHHHHHHHHhCCeEE--EECCCCC
Confidence 1 4555555567788999999 99887 654221 0 01 245566667787664 3433333
Q ss_pred CCCCC-------C--CHHHHHHHHHHHHHCCc--CEEEEcCC-CCCCc-HHHHHHHHHH---HHHhCCCceEEEEeC---
Q 018252 269 PVEGA-------I--PPSKVAYVAKELHDMGC--FEISLGDT-IGVGT-PGTVVPMLEA---VMAVVPVEKLAVHLH--- 329 (359)
Q Consensus 269 ~~~~r-------~--~~e~l~~~a~~l~~~Ga--d~I~L~DT-~G~~~-P~~v~~lv~~---l~~~~p~~~L~~H~H--- 329 (359)
|..-. . =.+++.+.++.+.++|+ +.|.| |- +|.+. +++-.++++. +++.+. .++-+=.-
T Consensus 327 P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~Iil-DPGiGF~Kt~~~nl~lL~~l~~l~~~lg-~PvLvG~SRKs 404 (442)
T 3mcm_A 327 TDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYF-DIGFGFGKKSDTARYLLENIIEIKRRLE-LKALVGHSRKP 404 (442)
T ss_dssp -------------CTHHHHHHHHHHHHHHHTCCGGGEEE-ECCCC------------CCHHHHHHHHT-SEEEECCTTCT
T ss_pred CccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEE-eCCCCCCCCHHHHHHHHHHHHHHHhhCC-CcEEEEechHH
Confidence 21100 0 14567788888999999 45654 43 45432 3333444433 333121 12221111
Q ss_pred ---CCCC---------cHHHHHHHHHHcCCCEEe
Q 018252 330 ---DTYG---------QSLPNILISLQVSPMHAK 351 (359)
Q Consensus 330 ---Nd~G---------LAlANalaAv~AGa~~ID 351 (359)
.-+| =.+|.+..|+..||++|-
T Consensus 405 fig~~~~~~~~~~R~~gt~a~~~~a~~~Ga~ivR 438 (442)
T 3mcm_A 405 SVLGLTKDSNLATLDRATRELSRKLEKLDIDIIR 438 (442)
T ss_dssp TTTTCCTTCCHHHHHHHHHHHHHHHTTTTCSEEE
T ss_pred HHHHHcCCCChHHhhHHHHHHHHHHHHCCCCEEe
Confidence 1111 124556778899999874
No 220
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=89.41 E-value=1.6 Score=42.60 Aligned_cols=81 Identities=10% Similarity=0.028 Sum_probs=68.0
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCC-CceEEEEe-CCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~L~~H~-HNd~GLAlANalaAv~AG 346 (359)
+..|.+-+.++++.+.+.|++-|.++=|.|= ++.++-.++++.+.+... .+++-++. +|+.--++..+..|-++|
T Consensus 75 g~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 154 (360)
T 4dpp_A 75 GRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVG 154 (360)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999999994 578888888888887653 36666654 688888888999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.+=+
T Consensus 155 adavlv 160 (360)
T 4dpp_A 155 MHAALH 160 (360)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 988744
No 221
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=89.39 E-value=2.7 Score=40.40 Aligned_cols=116 Identities=21% Similarity=0.113 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEeeeec---C-----------------CCC-----C-----CCCH-------HHHH
Q 018252 238 EDSLVRYRAVAHAAKVLSIPVRGYVSCVVG---C-----------------PVE-----G-----AIPP-------SKVA 280 (359)
Q Consensus 238 ~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg---~-----------------~~~-----~-----r~~~-------e~l~ 280 (359)
++.++.++++++.++++|-++...|.+. | . |-+ + ..+. +.+.
T Consensus 77 d~~i~~~~~~~~~vh~~G~~i~~Ql~H~-Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~ 155 (349)
T 3hgj_A 77 EDHLPGLKELARRIREAGAVPGIQLAHA-GRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFV 155 (349)
T ss_dssp GGGHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccC-CccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHH
Confidence 3456777888888899998887777642 1 0 000 0 0222 3455
Q ss_pred HHHHHHHHCCcCEEEEc-------------------CCCCCCc---HHHHHHHHHHHHHhCC-CceEEEEeCCC----CC
Q 018252 281 YVAKELHDMGCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVP-VEKLAVHLHDT----YG 333 (359)
Q Consensus 281 ~~a~~l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p-~~~L~~H~HNd----~G 333 (359)
+.++++.++|.|.|.|- |-.|... +..+.++++++++.++ +.+|++-.+-+ -|
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 66677788999977663 3334322 3346788999999985 45677755532 24
Q ss_pred cHH----HHHHHHHHcCCCEEecee
Q 018252 334 QSL----PNILISLQVSPMHAKPCF 354 (359)
Q Consensus 334 LAl----ANalaAv~AGa~~ID~tl 354 (359)
... .-+...-++|+++|+++.
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec
Confidence 333 334455678999999874
No 222
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=89.37 E-value=7.3 Score=37.94 Aligned_cols=126 Identities=17% Similarity=0.157 Sum_probs=74.8
Q ss_pred HHHHHHHHHhCCCCEEEEecc-CCCCCcCCCCCHHHHHHHhh-hcCCCeEEE-EeCChHhHHHHHHcCCCEEEEec-CCc
Q 018252 150 KVELIRRLVSSGLPVVEATSF-VSPKWVPQLADARDVMEAVR-DLEGARLPV-LTPNLKGFEAAIAAGAKEVAIFA-SAS 225 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~f-vspk~vPq~~D~~ev~~~l~-~~~~~~l~~-l~~n~~gie~a~~aGv~~V~i~~-s~S 225 (359)
-.+.++.|.++|++.|++-.. ..+ ....+.++.++ ..+++.+.+ -+.+.+..+.+.++|+|-|.+-. +.+
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~------~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs 182 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHS------EGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGS 182 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTS------HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCST
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCC------HHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCC
Confidence 356688899999999998532 221 11222233344 346766543 46678899999999999988821 111
Q ss_pred h--HHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc
Q 018252 226 E--AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG 297 (359)
Q Consensus 226 ~--~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~ 297 (359)
. .......+.. .+..+.++.+.++..+++|.+ +++-.++..+.+ +..+||+.|.+.
T Consensus 183 ~~~tr~~~g~g~p---~~~~l~~v~~~~~~~~iPVIA---------~GGI~~~~di~k----ala~GAd~V~vG 240 (366)
T 4fo4_A 183 ICTTRIVTGVGVP---QITAIADAAGVANEYGIPVIA---------DGGIRFSGDISK----AIAAGASCVMVG 240 (366)
T ss_dssp TBCHHHHHCCCCC---HHHHHHHHHHHHGGGTCCEEE---------ESCCCSHHHHHH----HHHTTCSEEEES
T ss_pred CCCcccccCcccc---hHHHHHHHHHHHhhcCCeEEE---------eCCCCCHHHHHH----HHHcCCCEEEEC
Confidence 1 1111122322 244556666667777888732 334557766433 445799988775
No 223
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=89.36 E-value=5.8 Score=37.07 Aligned_cols=118 Identities=11% Similarity=0.061 Sum_probs=74.7
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~a 92 (292)
T 2ojp_A 28 IDYHVASGTSAIVSVGTTGESA-----TLNHDEHADVVMMTLDLADG-RIPVIAGT---------GANATAEAISLTQRF 92 (292)
T ss_dssp HHHHHHHTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECccccchh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCccHHHHHHHHHHH
Confidence 5566678999888877777754 34667766666666666543 35553222 234667888889988
Q ss_pred HHCCcCEEEE-cCCCCCCcHHHHHHHHHHHHHhCCCceEEE-E----eCCCCCcHHHHHH
Q 018252 287 HDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-H----LHDTYGQSLPNIL 340 (359)
Q Consensus 287 ~~~Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H----~HNd~GLAlANal 340 (359)
.++|+|.+-+ +=..-..+++.+.+.++++.+..+ +||-+ | .+.++...+-.-|
T Consensus 93 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~P~~tg~~l~~~~~~~L 151 (292)
T 2ojp_A 93 NDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTD-LPQILYNVPSRTGCDLLPETVGRL 151 (292)
T ss_dssp TTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS-SCEEEECCHHHHSCCCCHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCcchhccCCCHHHHHHH
Confidence 8999986544 333334577888888888887764 45544 3 3445544443333
No 224
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=89.22 E-value=7.1 Score=37.04 Aligned_cols=118 Identities=12% Similarity=0.064 Sum_probs=78.3
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 49 i~~li~~Gv~Gl~v~GtTGE~~-----~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~~ai~la~~A 113 (315)
T 3si9_A 49 VEWQITQGINGVSPVGTTGESP-----TLTHEEHKRIIELCVEQVAK-RVPVVAGA---------GSNSTSEAVELAKHA 113 (315)
T ss_dssp HHHHHHTTCSEEECSSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCccccCcc-----ccCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHHHH
Confidence 4556678999988877777764 34677777777777776653 35553222 245678889999999
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEEE-----eCCCCCcHHHHHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVH-----LHDTYGQSLPNIL 340 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H-----~HNd~GLAlANal 340 (359)
.++|+|.+-+. =..-..+++.+.+.++++.+..+ +||-+. .+.++...+..-|
T Consensus 114 ~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiilYn~P~~tg~~l~~~~~~~L 172 (315)
T 3si9_A 114 EKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAIS-IPIIIYNIPSRSVIDMAVETMRDL 172 (315)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCC-CCEEEEeCchhhCCCCCHHHHHHH
Confidence 99999975543 33344577888888888888764 455543 3555555544333
No 225
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=89.22 E-value=9.8 Score=35.76 Aligned_cols=114 Identities=10% Similarity=0.056 Sum_probs=74.8
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-+-+.-++.|.+ -.|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 43 v~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~st~~ai~la~~A 107 (304)
T 3cpr_A 43 AAYLVDKGLDSLVLAGTTGESP-----TTTAAEKLELLKAVREEVGD-RAKLIAGV---------GTNNTRTSVELAEAA 107 (304)
T ss_dssp HHHHHHTTCCEEEESSTTTTTT-----TSCHHHHHHHHHHHHHHHTT-TSEEEEEC---------CCSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEecC---------CCCCHHHHHHHHHHH
Confidence 4556678999988887777754 35667777666666666543 24553222 245678888999999
Q ss_pred HHCCcCEEEE-cCCCCCCcHHHHHHHHHHHHHhCCCceEEE-E----eCCCCCcHH
Q 018252 287 HDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-H----LHDTYGQSL 336 (359)
Q Consensus 287 ~~~Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H----~HNd~GLAl 336 (359)
.++|+|.+-+ +=...-.+++.+.+.++++.+..+ +||-+ | .+.++...+
T Consensus 108 ~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~-lPiilYn~P~~tg~~l~~~~ 162 (304)
T 3cpr_A 108 ASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATE-VPICLYDIPGRSGIPIESDT 162 (304)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC-SCEEEEECHHHHSSCCCHHH
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEEeCccccCcCCCHHH
Confidence 9999996544 333444577888888888888764 45444 4 345555444
No 226
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=89.13 E-value=6.7 Score=37.52 Aligned_cols=104 Identities=18% Similarity=0.119 Sum_probs=60.6
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.|.+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 61 v~~li~~Gv~Gl~v~GtTGE~~-----~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---------g~~st~eai~la~~A 125 (332)
T 2r8w_A 61 IARLDAAEVDSVGILGSTGIYM-----YLTREERRRAIEAAATILRG-RRTLMAGI---------GALRTDEAVALAKDA 125 (332)
T ss_dssp HHHHHHHTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSEEEEEE---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHH
Confidence 4555667777777766666653 34556666555555555542 24443222 233556777777777
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+. =..--.+++.+.+.++++.+..+ +||-+
T Consensus 126 ~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~-lPiil 165 (332)
T 2r8w_A 126 EAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATA-LPLAI 165 (332)
T ss_dssp HHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS-SCEEE
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 77788765443 22333466777777777776654 34443
No 227
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=89.09 E-value=1.4 Score=41.31 Aligned_cols=80 Identities=15% Similarity=0.083 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPM 348 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~ 348 (359)
+..|.+-+.++++.+.+.|++-|.++-|.|= +++++-.++++.+.+...+ -|.--++|+.--++..+..|-++||+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~~~Gad 93 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSNEMDIL 93 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHHTSCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHHhcCCC
Confidence 5799999999999999999999999999996 6788888888888887766 34445778888889999999999999
Q ss_pred EEec
Q 018252 349 HAKP 352 (359)
Q Consensus 349 ~ID~ 352 (359)
.+=.
T Consensus 94 avlv 97 (288)
T 2nuw_A 94 GVSS 97 (288)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8744
No 228
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=89.04 E-value=1.5 Score=41.73 Aligned_cols=81 Identities=12% Similarity=-0.015 Sum_probs=67.9
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhC-CCceEEEE-eCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVV-PVEKLAVH-LHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~L~~H-~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.|= ++.++-.++++.+.+.. +.+++-+| ++|+.--++..+..|-++|
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~G 117 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAG 117 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 5799999999999999999999999999996 46788888888888765 34566665 4688888999999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.|=+
T Consensus 118 adavlv 123 (315)
T 3si9_A 118 ADAVLV 123 (315)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 988743
No 229
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=89.03 E-value=6.1 Score=38.37 Aligned_cols=117 Identities=12% Similarity=0.021 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC--------------CC-----------------CC--CCCHH------
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC--------------PV-----------------EG--AIPPS------ 277 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~--------------~~-----------------~~--r~~~e------ 277 (359)
.++.++.++++++.++++|-++...|.+. |- |- .. ..+.+
T Consensus 74 ~d~~i~~~k~l~~avH~~G~~i~~QL~H~-Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii 152 (362)
T 4ab4_A 74 NDEQVRGWNNVTKAVHAAGGRIFLQLWHV-GRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIV 152 (362)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEeccC-cccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHH
Confidence 35667888899999999999887777641 10 00 00 02223
Q ss_pred -HHHHHHHHHHHCCcCEEEEcCCC-------------------CCCc---HHHHHHHHHHHHHhCCCceEEEEeCCC--C
Q 018252 278 -KVAYVAKELHDMGCFEISLGDTI-------------------GVGT---PGTVVPMLEAVMAVVPVEKLAVHLHDT--Y 332 (359)
Q Consensus 278 -~l~~~a~~l~~~Gad~I~L~DT~-------------------G~~~---P~~v~~lv~~l~~~~p~~~L~~H~HNd--~ 332 (359)
.+.+.++++.++|.|.|.|-=.- |... +..+.++++++++.++..+|++-.+-+ +
T Consensus 153 ~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~ 232 (362)
T 4ab4_A 153 EAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADA 232 (362)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCS
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccc
Confidence 45555667788999987774333 3322 445678899999988643777766532 1
Q ss_pred -Cc--------HHHHHHHHHHcCCCEEecee
Q 018252 333 -GQ--------SLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 333 -GL--------AlANalaAv~AGa~~ID~tl 354 (359)
|+ ++.-+.+.-++|+++|+++-
T Consensus 233 ~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~ 263 (362)
T 4ab4_A 233 HDMGDADRAETFTYVARELGKRGIAFICSRE 263 (362)
T ss_dssp SSCCCTTHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cccCCCCcHHHHHHHHHHHHHhCCCEEEECC
Confidence 11 23345555678999999763
No 230
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.99 E-value=6.3 Score=36.85 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=65.1
Q ss_pred HHHHHH-cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 018252 207 FEAAIA-AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 285 (359)
Q Consensus 207 ie~a~~-aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~ 285 (359)
++..++ .|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.
T Consensus 30 v~~li~~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~ 94 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVGGSTGENF-----MLSTEEKKEIFRIAKDEAKD-QIALIAQV---------GSVNLKEAVELGKY 94 (293)
T ss_dssp HHHHHHTSCCSEEEESSGGGTGG-----GSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeCccccchh-----hCCHHHHHHHHHHHHHHhCC-CCeEEEec---------CCCCHHHHHHHHHH
Confidence 556677 8888887777666654 34566666666666666543 24442211 23466778888888
Q ss_pred HHHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 286 LHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 286 l~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
+.++|+|.+-+. =..--.+++.+.+.++++.+..+ +||-+
T Consensus 95 a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiil 135 (293)
T 1f6k_A 95 ATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG-SNMIV 135 (293)
T ss_dssp HHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC-CCEEE
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEE
Confidence 888888865443 33333467778888888777655 34443
No 231
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=88.97 E-value=1.1 Score=42.68 Aligned_cols=81 Identities=11% Similarity=-0.035 Sum_probs=69.1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhC-CCceEEEEe-CCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVV-PVEKLAVHL-HDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~L~~H~-HNd~GLAlANalaAv~AG 346 (359)
+..|.+-+.++++.+.+.|++-|.++=|.|= ++.++-.++++.+.+.. +.+++-+|. +|+.--++..+..|-++|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 106 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAG 106 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999995 77888888998888865 345666654 788888999999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.+=+
T Consensus 107 adavlv 112 (318)
T 3qfe_A 107 ANYVLV 112 (318)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998744
No 232
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=88.94 E-value=4.9 Score=40.74 Aligned_cols=132 Identities=17% Similarity=0.157 Sum_probs=77.9
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh-cCCCeEEE-EeCChHhHHHHHHcCCCEEEEecCCch
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLPV-LTPNLKGFEAAIAAGAKEVAIFASASE 226 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~-~~~~~l~~-l~~n~~gie~a~~aGv~~V~i~~s~S~ 226 (359)
+..+.++.|.++|++.|++... .+. .....+.++.+++ .++..+.+ -+.+.++.+.+.++|++.|.+-...-.
T Consensus 256 d~~era~aLveaGvd~I~Id~a-~g~----~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gs 330 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTA-HGH----SQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGS 330 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECS-CTT----SHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCST
T ss_pred chHHHHHHHHhhccceEEeccc-ccc----hhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCcc
Confidence 4567788999999999999863 221 1222333444443 45555543 345778899999999999886221111
Q ss_pred HHH-HhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCC
Q 018252 227 AFS-KSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299 (359)
Q Consensus 227 ~~~-~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT 299 (359)
.+. +...|... ..+..+.++.+.+++.+++|.+ ++|-.++..+.+. .++||+.+.++=.
T Consensus 331 i~~~~~~~g~g~-p~~~~l~~v~~~~~~~~iPVIa---------~GGI~~~~di~ka----la~GA~~V~vGs~ 390 (511)
T 3usb_A 331 ICTTRVVAGVGV-PQLTAVYDCATEARKHGIPVIA---------DGGIKYSGDMVKA----LAAGAHVVMLGSM 390 (511)
T ss_dssp TCCHHHHHCCCC-CHHHHHHHHHHHHHTTTCCEEE---------ESCCCSHHHHHHH----HHTTCSEEEESTT
T ss_pred ccccccccCCCC-CcHHHHHHHHHHHHhCCCcEEE---------eCCCCCHHHHHHH----HHhCchhheecHH
Confidence 110 11112211 1245566677777878888732 2355677665443 4579998887743
No 233
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=88.91 E-value=2.2 Score=40.12 Aligned_cols=81 Identities=15% Similarity=0.131 Sum_probs=68.4
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCC-CceEEE-EeCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAV-HLHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~L~~-H~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.|= +++++-.++++.+.+... .+++-+ -++|+.--++..+..|-++|
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 98 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAG 98 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999986 678888899998888764 355555 46678888899999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.|=+
T Consensus 99 adavlv 104 (294)
T 3b4u_A 99 ARNILL 104 (294)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998744
No 234
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=88.89 E-value=1.4 Score=45.79 Aligned_cols=115 Identities=15% Similarity=0.093 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeeeecC---------CC-----CCCCCH------------HHHHHHHHHHHHCCcC
Q 018252 239 DSLVRYRAVAHAAKVLSIPVRGYVSCVVGC---------PV-----EGAIPP------------SKVAYVAKELHDMGCF 292 (359)
Q Consensus 239 e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~---------~~-----~~r~~~------------e~l~~~a~~l~~~Gad 292 (359)
+.++.++.+++..+++|-++...|.+. |- |- .....| +.+.+.++.+.++|.|
T Consensus 78 ~~~~~~~~~~~~vh~~g~~i~~Ql~h~-Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd 156 (671)
T 1ps9_A 78 SQIPHHRTITEAVHQEGGKIALQILHT-GRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYD 156 (671)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEEECCC-GGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeccC-CcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 445667788888889998887777542 10 00 001122 5677778888899999
Q ss_pred EEEEc-------------------CCCCCCc---HHHHHHHHHHHHHhCC-CceEEEEe------CC--CCCcHHHHHHH
Q 018252 293 EISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVP-VEKLAVHL------HD--TYGQSLPNILI 341 (359)
Q Consensus 293 ~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p-~~~L~~H~------HN--d~GLAlANala 341 (359)
.|.|- |-.|... +..+.++++++++.++ +.+|.+-. |. +...++.-+.+
T Consensus 157 ~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~ 236 (671)
T 1ps9_A 157 GVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQA 236 (671)
T ss_dssp EEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHH
T ss_pred EEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHH
Confidence 88773 3334332 4557889999999874 45555411 21 11223334455
Q ss_pred HHHcCCCEEecee
Q 018252 342 SLQVSPMHAKPCF 354 (359)
Q Consensus 342 Av~AGa~~ID~tl 354 (359)
.-++|+++|+++.
T Consensus 237 l~~~g~d~i~v~~ 249 (671)
T 1ps9_A 237 IEAAGATIINTGI 249 (671)
T ss_dssp HHHHTCSEEEEEE
T ss_pred HHhcCCCEEEcCC
Confidence 5679999998753
No 235
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=88.88 E-value=3.2 Score=38.66 Aligned_cols=100 Identities=20% Similarity=0.205 Sum_probs=65.2
Q ss_pred HHHHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc----CCC---------------CC
Q 018252 243 RYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG----DTI---------------GV 302 (359)
Q Consensus 243 ~i~~~i~~Ak~~G~~-V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~----DT~---------------G~ 302 (359)
++.+..+.+|+.|-+ +..||+ -| --+++...++++.+.+.|+|.|-|. |.+ .-
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~--aG-----dP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G 76 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVT--IG-----DPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAG 76 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEE--TT-----SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCeEEEEEe--CC-----CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC
Confidence 345556666665544 556665 22 3367899999999999999966655 111 22
Q ss_pred CcHHHHHHHHHHHHHhCCCceEEEEeCCC----CCcHHHHHHHHHHcCCCEE
Q 018252 303 GTPGTVVPMLEAVMAVVPVEKLAVHLHDT----YGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 303 ~~P~~v~~lv~~l~~~~p~~~L~~H~HNd----~GLAlANalaAv~AGa~~I 350 (359)
.+...+-++++.+|+..+.+|+.+-..-| +|.. .-+..+.++|++.+
T Consensus 77 ~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e-~f~~~~~~aGvdgv 127 (267)
T 3vnd_A 77 TTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID-EFYTKAQAAGVDSV 127 (267)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH-HHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH-HHHHHHHHcCCCEE
Confidence 44556778899998875567777765522 2432 34667789999875
No 236
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=88.87 E-value=6.7 Score=36.95 Aligned_cols=104 Identities=11% Similarity=0.084 Sum_probs=63.5
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~-----~Ls~eEr~~vi~~~~~~~~g-rvpViaGv---------g~~st~~ai~la~~A 103 (306)
T 1o5k_A 39 VRYQLENGVNALIVLGTTGESP-----TVNEDEREKLVSRTLEIVDG-KIPVIVGA---------GTNSTEKTLKLVKQA 103 (306)
T ss_dssp HHHHHHTTCCEEEESSGGGTGG-----GCCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCccccchh-----hCCHHHHHHHHHHHHHHhCC-CCeEEEcC---------CCccHHHHHHHHHHH
Confidence 4555667888877776666653 34566666666666665543 24453222 234667778888888
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+. =..-..+++.+.+.++++.+..+ +||-+
T Consensus 104 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiil 143 (306)
T 1o5k_A 104 EKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTD-LGIVV 143 (306)
T ss_dssp HHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS-SCEEE
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEE
Confidence 88888865443 33333466777777777777654 44444
No 237
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=88.84 E-value=1.6 Score=40.78 Aligned_cols=80 Identities=10% Similarity=0.061 Sum_probs=68.7
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPM 348 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~ 348 (359)
+..|.+-+.++++.+.+.|++-|.++-|.|= +++++-.++++.+.+...+ -|.--++|+.--++..+..|-++||+
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~~Gad 92 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRGAE 92 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999986 6788889999999988776 34445778888889999999999999
Q ss_pred EEec
Q 018252 349 HAKP 352 (359)
Q Consensus 349 ~ID~ 352 (359)
.+=+
T Consensus 93 avlv 96 (286)
T 2r91_A 93 AVAS 96 (286)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7743
No 238
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=88.84 E-value=4.4 Score=36.49 Aligned_cols=166 Identities=9% Similarity=0.043 Sum_probs=84.7
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcCCC--CCHHHHHHHhhhcCCCeEEEEeCC--------h--------HhHHHHHHc
Q 018252 152 ELIRRLVSSGLPVVEATSFVSPKWVPQL--ADARDVMEAVRDLEGARLPVLTPN--------L--------KGFEAAIAA 213 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG~fvspk~vPq~--~D~~ev~~~l~~~~~~~l~~l~~n--------~--------~gie~a~~a 213 (359)
+.++.+.++|++.||+.....+ .++.. .+.+++.+.+++ .++++.++.+. . +.++.|.+.
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~-~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~l 96 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQ-NLYMQEYETTERELNCLKD-KTLEITMISDYLDISLSADFEKTIEKCEQLAILANWF 96 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHH-HHHHHCHHHHHHHHHHTGG-GTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEcccccc-cccccCHHHHHHHHHHHHH-cCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 4566777899999999642100 00000 123334343332 35666665431 1 124555667
Q ss_pred CCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCE
Q 018252 214 GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFE 293 (359)
Q Consensus 214 Gv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~ 293 (359)
|++.|.++........ ......+...+.+..+.++|+++|+++. +.. .+...-.+++.+.++++.+- ...
T Consensus 97 G~~~v~~~~g~~~~~~--~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE~---~~~~~~~~~~~~~~l~~~~~---~~~ 166 (286)
T 3dx5_A 97 KTNKIRTFAGQKGSAD--FSQQERQEYVNRIRMICELFAQHNMYVL--LET---HPNTLTDTLPSTLELLGEVD---HPN 166 (286)
T ss_dssp TCCEEEECSCSSCGGG--SCHHHHHHHHHHHHHHHHHHHHTTCEEE--EEC---CTTSTTSSHHHHHHHHHHHC---CTT
T ss_pred CCCEEEEcCCCCCccc--CcHHHHHHHHHHHHHHHHHHHHhCCEEE--Eec---CCCcCcCCHHHHHHHHHhcC---CCC
Confidence 9999988654321100 0001135567788889999999998763 321 11112347777777777653 222
Q ss_pred EE-EcCCCCCCcH-HHHHHHHHHHHHhCCCceEEEEeCCCCC
Q 018252 294 IS-LGDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTYG 333 (359)
Q Consensus 294 I~-L~DT~G~~~P-~~v~~lv~~l~~~~p~~~L~~H~HNd~G 333 (359)
+. .-|+.=.... ....+.++.+. + -...+|.+|..+
T Consensus 167 vg~~~D~~h~~~~g~d~~~~l~~~~---~-~i~~vHl~D~~~ 204 (286)
T 3dx5_A 167 LKINLDFLHIWESGADPVDSFQQLR---P-WIQHYHFKNISS 204 (286)
T ss_dssp EEEEEEHHHHHHTTCCHHHHHHHHG---G-GEEEEEECEESC
T ss_pred eEEEeccccHhhcCCCHHHHHHHHH---h-HheEEEecCCcc
Confidence 22 2343211110 12223333332 3 457889988765
No 239
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=88.83 E-value=6.4 Score=37.86 Aligned_cols=104 Identities=14% Similarity=0.112 Sum_probs=62.0
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-|.+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 58 v~~li~~Gv~Gl~v~GtTGE~~-----~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---------g~~st~eai~la~~A 122 (343)
T 2v9d_A 58 IDDLIKAGVDGLFFLGSGGEFS-----QLGAEERKAIARFAIDHVDR-RVPVLIGT---------GGTNARETIELSQHA 122 (343)
T ss_dssp HHHHHHTTCSCEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CSSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHHH
Confidence 4455667888777776666654 34566666666666655543 24443222 234566777888888
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+. =..--.+++.+.+.++++.+..+ +||-+
T Consensus 123 ~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~-lPiil 162 (343)
T 2v9d_A 123 QQAGADGIVVINPYYWKVSEANLIRYFEQVADSVT-LPVML 162 (343)
T ss_dssp HHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCS-SCEEE
T ss_pred HhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 88888865443 23333466777777777777654 34443
No 240
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=88.82 E-value=1.6 Score=42.70 Aligned_cols=68 Identities=13% Similarity=0.050 Sum_probs=51.6
Q ss_pred HHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 279 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 279 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
..+.++.+.++|++.|.| ||.. ..|..+.+.++.+++.+|++++.... .....-+..++++|||.|.+
T Consensus 109 ~~~~~~~lieaGvd~I~i-dta~-G~~~~~~~~I~~ik~~~p~v~Vi~G~----v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLI-DSSH-GHSEGVLQRIRETRAAYPHLEIIGGN----VATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp CHHHHHHHHHTTCSEEEE-ECSC-TTSHHHHHHHHHHHHHCTTCEEEEEE----ECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCCCEEEE-eCCC-CCCHHHHHHHHHHHHhcCCCceEeee----eCCHHHHHHHHHcCCCEEEE
Confidence 456788899999998876 4443 24678888999999999887765531 13456778899999999987
No 241
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.80 E-value=7.5 Score=36.32 Aligned_cols=119 Identities=14% Similarity=0.139 Sum_probs=79.5
Q ss_pred hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 018252 206 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 285 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~ 285 (359)
-++..++.|++.+.+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.
T Consensus 28 lv~~li~~Gv~gl~v~GttGE~~-----~Lt~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~ 92 (292)
T 3daq_A 28 HVNFLLENNAQAIIVNGTTAESP-----TLTTDEKELILKTVIDLVDK-RVPVIAGT---------GTNDTEKSIQASIQ 92 (292)
T ss_dssp HHHHHHHTTCCEEEESSGGGTGG-----GSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECccccccc-----cCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CcccHHHHHHHHHH
Confidence 35666778999998887777764 34677777777777776643 35553322 23467889999999
Q ss_pred HHHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE-E----eCCCCCcHHHHHH
Q 018252 286 LHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV-H----LHDTYGQSLPNIL 340 (359)
Q Consensus 286 l~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H----~HNd~GLAlANal 340 (359)
+.++|+|.+-+. =..-..+++.+.+.++++.+..+ +||-+ | .+.++...+-.-|
T Consensus 93 a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~-lPiilYn~P~~tg~~l~~~~~~~L 152 (292)
T 3daq_A 93 AKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVK-LPVVLYNVPSRTNMTIEPETVEIL 152 (292)
T ss_dssp HHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC-SCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEecccccCCCCCHHHHHHH
Confidence 999999975554 33445577888889988888764 45444 3 3555555554433
No 242
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=88.77 E-value=6.3 Score=37.43 Aligned_cols=104 Identities=16% Similarity=0.187 Sum_probs=69.8
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-+-+.-++.|.+ -.|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 38 v~~li~~Gv~gl~v~GtTGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~a 102 (318)
T 3qfe_A 38 YAYLARSGLTGLVILGTNAEAF-----LLTREERAQLIATARKAVGP-DFPIMAGV---------GAHSTRQVLEHINDA 102 (318)
T ss_dssp HHHHHTTTCSEEEESSGGGTGG-----GSCHHHHHHHHHHHHHHHCT-TSCEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHHHH
Confidence 4556678999888877777754 34667766666666666532 35553222 245678888999999
Q ss_pred HHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+.=..=. .+++.+.+.++++.+..+ +||-+
T Consensus 103 ~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~-lPiil 144 (318)
T 3qfe_A 103 SVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSP-LPVVI 144 (318)
T ss_dssp HHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCS-SCEEE
T ss_pred HHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCC-CCEEE
Confidence 9999997776554222 467888888888888765 45444
No 243
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=88.76 E-value=5.1 Score=38.21 Aligned_cols=184 Identities=13% Similarity=0.070 Sum_probs=106.1
Q ss_pred HHHHHHhCCCCEEEEe-cc------CCCCCcCCCCCHHHHHHHhhhc---CCCeEEEEe--C----Ch----HhHHHHHH
Q 018252 153 LIRRLVSSGLPVVEAT-SF------VSPKWVPQLADARDVMEAVRDL---EGARLPVLT--P----NL----KGFEAAIA 212 (359)
Q Consensus 153 ia~~L~~aGv~~IEvG-~f------vspk~vPq~~D~~ev~~~l~~~---~~~~l~~l~--~----n~----~gie~a~~ 212 (359)
-++.+.++|++.|=++ .. -.|+.. .-..++++..++.+ .++.+.+++ + +. +-+++..+
T Consensus 37 sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~--~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~ 114 (307)
T 3lye_A 37 SARTAMELGFKSLYMTGAGTTASRLGQPDLA--IAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVEHYIR 114 (307)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHCCCSSS--CSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeccHHHHHHhcCCCCCC--CCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHHHHHH
Confidence 3557788999999884 21 123321 23456666666543 221244444 3 11 23455567
Q ss_pred cCCCEEEEecCCchH---HHHhhhcCCHHHHHHHHHHHHHHHHhCCCc--EEEEEeeeecCCCCCCCCHHHHHHHHHHHH
Q 018252 213 AGAKEVAIFASASEA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIP--VRGYVSCVVGCPVEGAIPPSKVAYVAKELH 287 (359)
Q Consensus 213 aGv~~V~i~~s~S~~---~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~--V~~~is~~fg~~~~~r~~~e~l~~~a~~l~ 287 (359)
+|+.-|++-....+- |...+.=.+.++..++++.+.+.+++.|.. +.+-.- ++. ....++.++-++...
T Consensus 115 aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTD-a~~-----~~gldeAi~Ra~ay~ 188 (307)
T 3lye_A 115 SGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTD-ALQ-----SLGYEECIERLRAAR 188 (307)
T ss_dssp TTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC-CHH-----HHCHHHHHHHHHHHH
T ss_pred cCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEech-hhh-----ccCHHHHHHHHHHHH
Confidence 899999997665432 111111136789999999888887766644 322111 111 124567788888889
Q ss_pred HCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCC-CCCcHHHHHHHHHHcCCCEEec
Q 018252 288 DMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHD-TYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 288 ~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HN-d~GLAlANalaAv~AGa~~ID~ 352 (359)
++|||.|.+. |.-+++++.++.+.+. .+|- .+-.-... +..+. .-.--++|+++|-.
T Consensus 189 eAGAD~ifi~---~~~~~~~~~~i~~~~~-~~Pv-~~n~~~~g~~p~~t---~~eL~~lGv~~v~~ 246 (307)
T 3lye_A 189 DEGADVGLLE---GFRSKEQAAAAVAALA-PWPL-LLNSVENGHSPLIT---VEEAKAMGFRIMIF 246 (307)
T ss_dssp HTTCSEEEEC---CCSCHHHHHHHHHHHT-TSCB-EEEEETTSSSCCCC---HHHHHHHTCSEEEE
T ss_pred HCCCCEEEec---CCCCHHHHHHHHHHcc-CCce-eEEeecCCCCCCCC---HHHHHHcCCeEEEE
Confidence 9999999886 6778999999888875 2342 22222111 11222 23455668888743
No 244
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=88.71 E-value=1.8 Score=40.92 Aligned_cols=81 Identities=21% Similarity=0.140 Sum_probs=67.3
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEEE-eCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVH-LHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~H-~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.| .+++++-.++++.+.+... .+++-++ ++|+.--++..+..|-++|
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 107 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVG 107 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999988 4668888888888887653 3555553 5678888889999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.+=+
T Consensus 108 adavlv 113 (301)
T 1xky_A 108 VDAVML 113 (301)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998744
No 245
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=88.70 E-value=18 Score=34.95 Aligned_cols=186 Identities=10% Similarity=0.011 Sum_probs=104.2
Q ss_pred HHHHHHHHhCCCCEEEEecc-C-----CCC--C--cCC---------CCCHHHHHHHhhhc---CCCeE-EEE-eCChHh
Q 018252 151 VELIRRLVSSGLPVVEATSF-V-----SPK--W--VPQ---------LADARDVMEAVRDL---EGARL-PVL-TPNLKG 206 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~f-v-----spk--~--vPq---------~~D~~ev~~~l~~~---~~~~l-~~l-~~n~~g 206 (359)
.+.++.|.++|+-.||++.. . +|+ . .|. ....+.+++.+++. ++..+ .-+ ..+.++
T Consensus 61 ~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~G~~~~d 140 (354)
T 4ef8_A 61 TEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMSGLSMRE 140 (354)
T ss_dssp HHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEECCSSHHH
T ss_pred HHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeccCCHHH
Confidence 46678899999999999962 1 111 1 010 12356666666543 23222 222 335544
Q ss_pred HH----HHH---HcCCCEEE--EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCH
Q 018252 207 FE----AAI---AAGAKEVA--IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPP 276 (359)
Q Consensus 207 ie----~a~---~aGv~~V~--i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~-G~~V~~~is~~fg~~~~~r~~~ 276 (359)
+. .+. +.|++.|. +..|..+- ...++... +.+.++++..++. .++|.+-+. |+ .+.
T Consensus 141 ~~~~a~~l~~~~~~g~d~ielNisCPn~~g--g~~l~~~~----e~~~~il~av~~~~~~PV~vKi~-----p~---~d~ 206 (354)
T 4ef8_A 141 NVEMCKRLAAVATEKGVILELNLSCPNVPG--KPQVAYDF----DAMRQCLTAVSEVYPHSFGVKMP-----PY---FDF 206 (354)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECSSCCSTT--SCCGGGSH----HHHHHHHHHHHHHCCSCEEEEEC-----CC---CSH
T ss_pred HHHHHHHHhhhhhcCCCEEEEeCCCCCCCC--chhhccCH----HHHHHHHHHHHHhhCCCeEEEec-----CC---CCH
Confidence 33 332 35788655 45444321 11222232 2334444444443 567766554 22 367
Q ss_pred HHHHHHHHHHHHCC-cCEEEEcCCCC---------------------CCc----HHHHHHHHHHHHHhCCCceEEEEeCC
Q 018252 277 SKVAYVAKELHDMG-CFEISLGDTIG---------------------VGT----PGTVVPMLEAVMAVVPVEKLAVHLHD 330 (359)
Q Consensus 277 e~l~~~a~~l~~~G-ad~I~L~DT~G---------------------~~~----P~~v~~lv~~l~~~~p~~~L~~H~HN 330 (359)
+.+.++++.+.++| +|.|.+-.|.| ... +..-.+++..+++..+.++|-.=+==
T Consensus 207 ~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI 286 (354)
T 4ef8_A 207 AHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGV 286 (354)
T ss_dssp HHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCC
T ss_pred HHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCc
Confidence 78899999999998 99998755542 011 12345778888887766666543322
Q ss_pred CCCcHHHHHHHHHHcCCCEEece
Q 018252 331 TYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 331 d~GLAlANalaAv~AGa~~ID~t 353 (359)
.. ..-++.++.+||+.|-..
T Consensus 287 ~s---~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 287 YT---GEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp CS---HHHHHHHHHHTEEEEEEC
T ss_pred CC---HHHHHHHHHcCCCEEEEh
Confidence 22 356777888999988654
No 246
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=88.61 E-value=1.5 Score=41.24 Aligned_cols=80 Identities=16% Similarity=0.091 Sum_probs=68.4
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPM 348 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~ 348 (359)
+..|.+.+.++++.+.+.|++-|.++-|.|= +++++-.++++.+.+...+ -|.--++|+.--++..+..|-++||+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~~Gad 93 (293)
T 1w3i_A 15 NRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDFDIV 93 (293)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGGSCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999986 6788888999988888766 34445778888889999999999999
Q ss_pred EEec
Q 018252 349 HAKP 352 (359)
Q Consensus 349 ~ID~ 352 (359)
.+=+
T Consensus 94 avlv 97 (293)
T 1w3i_A 94 GIAS 97 (293)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8744
No 247
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.56 E-value=5.2 Score=43.89 Aligned_cols=79 Identities=10% Similarity=0.045 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEE----cCC-----CCC---CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHH
Q 018252 274 IPPSKVAYVAKELHDMGCFEISL----GDT-----IGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILI 341 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L----~DT-----~G~---~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANala 341 (359)
.+++.+.++++.+.++|+|.|.| +-+ .|. ..|..+.++++++++.++ ++|.+-.--+.--...-+.+
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~-~Pv~vK~~~~~~~~~~~a~~ 723 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ-IPFFAKLTPNVTDIVSIARA 723 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS-SCEEEEECSCSSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC-CceEEEeCCChHHHHHHHHH
Confidence 47899999999999999997777 111 222 468889999999999874 56777555455445666888
Q ss_pred HHHcCCCEEece
Q 018252 342 SLQVSPMHAKPC 353 (359)
Q Consensus 342 Av~AGa~~ID~t 353 (359)
+.++|++.|.++
T Consensus 724 ~~~~G~d~i~v~ 735 (1025)
T 1gte_A 724 AKEGGADGVTAT 735 (1025)
T ss_dssp HHHHTCSEEEEC
T ss_pred HHHcCCCEEEEe
Confidence 899999999984
No 248
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.46 E-value=1.5 Score=48.17 Aligned_cols=135 Identities=13% Similarity=0.161 Sum_probs=76.6
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhC-CCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 285 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~-G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~ 285 (359)
++++.++|++.|.+-++.........+|.+..+..+.+.++++.+++. +++|.+-++ + +.+.+.++++.
T Consensus 654 a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~-----~-----~~~~~~~~a~~ 723 (1025)
T 1gte_A 654 SRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLT-----P-----NVTDIVSIARA 723 (1025)
T ss_dssp HHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEEC-----S-----CSSCHHHHHHH
T ss_pred HHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeC-----C-----ChHHHHHHHHH
Confidence 445556899987765431111111223333222344555666666654 677655443 2 11247788999
Q ss_pred HHHCCcCEEEEcCCC-------------------------CCCcHHH---HHHHHHHHHHhCCCceEEEEeCCCCCcHHH
Q 018252 286 LHDMGCFEISLGDTI-------------------------GVGTPGT---VVPMLEAVMAVVPVEKLAVHLHDTYGQSLP 337 (359)
Q Consensus 286 l~~~Gad~I~L~DT~-------------------------G~~~P~~---v~~lv~~l~~~~p~~~L~~H~HNd~GLAlA 337 (359)
+.++|+|.|.+..|. |...|.. ..+++..+++.++.++|-.=+-=..+ .
T Consensus 724 ~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~---~ 800 (1025)
T 1gte_A 724 AKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSA---E 800 (1025)
T ss_dssp HHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSH---H
T ss_pred HHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCH---H
Confidence 999999999984321 2222222 13678888888866776665444433 4
Q ss_pred HHHHHHHcCCCEEecee
Q 018252 338 NILISLQVSPMHAKPCF 354 (359)
Q Consensus 338 NalaAv~AGa~~ID~tl 354 (359)
.+.+++.+||+.|-..-
T Consensus 801 da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 801 SGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp HHHHHHHTTCSEEEESH
T ss_pred HHHHHHHcCCCEEEEee
Confidence 55566678999886543
No 249
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=88.44 E-value=4.9 Score=37.93 Aligned_cols=134 Identities=13% Similarity=0.100 Sum_probs=86.4
Q ss_pred HHHHHHcCCCEEEEecC-CchH-HHHhh-hcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFAS-ASEA-FSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 283 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s-~S~~-~~~~n-~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a 283 (359)
...+-++|++-+.+.-+ .+-. +-.-. .-.|.++.+..++.+.+. ..+.|.+.+- || + - +++.+.+.+
T Consensus 34 A~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~---~~~PviaD~d--~G--y--g-~~~~~~~~v 103 (287)
T 3b8i_A 34 ARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRV---ARLPVIADAD--HG--Y--G-NALNVMRTV 103 (287)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTT---CSSCEEEECT--TC--S--S-SHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhc---CCCCEEEECC--CC--C--C-CHHHHHHHH
Confidence 34444578888877433 2211 11111 125788888777666543 3455543332 32 2 2 889999999
Q ss_pred HHHHHCCcCEEEEcCCCC----------CCcHHHHHHHHHHHHHhC--CCceEEEEeCC---CCCcHHHHHHHHHHcCCC
Q 018252 284 KELHDMGCFEISLGDTIG----------VGTPGTVVPMLEAVMAVV--PVEKLAVHLHD---TYGQSLPNILISLQVSPM 348 (359)
Q Consensus 284 ~~l~~~Gad~I~L~DT~G----------~~~P~~v~~lv~~l~~~~--p~~~L~~H~HN---d~GLAlANalaAv~AGa~ 348 (359)
+++.++|+..|.|-|..+ +..++++.+.|+++++.- ++..|-.-.-. .+--++.-+.+-.+|||+
T Consensus 104 ~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd 183 (287)
T 3b8i_A 104 VELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGAD 183 (287)
T ss_dssp HHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHHcCCC
Confidence 999999999999999874 345667888888888763 44444444433 111378888899999999
Q ss_pred EE
Q 018252 349 HA 350 (359)
Q Consensus 349 ~I 350 (359)
.|
T Consensus 184 ~i 185 (287)
T 3b8i_A 184 GI 185 (287)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 250
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=88.42 E-value=3.3 Score=41.58 Aligned_cols=109 Identities=11% Similarity=0.083 Sum_probs=71.6
Q ss_pred EEEecCCchHHHHhhhcCC-HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE
Q 018252 218 VAIFASASEAFSKSNINCS-IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL 296 (359)
Q Consensus 218 V~i~~s~S~~~~~~n~~~t-~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L 296 (359)
..++.|..|.+.+.+.+.. .++-++.++++++.|++.|+++...|+.-+.--+.+.-+.+.+..-.+.+.++||+.+.|
T Consensus 33 tYiYAPKDDpyhr~~WRe~Yp~eel~~l~eLv~~a~~~~V~Fv~aisPG~di~~s~~~d~~~L~~K~~ql~~lGVr~FaI 112 (447)
T 2xsa_A 33 TYIYGPKDDVHVRARWRVPYDAAGLARLTELRDAAAARGMVFYVSLAPCLDVTYSDPQDRAALLARVDQLARAGLRNLVL 112 (447)
T ss_dssp EEEECCTTCTTTTTTTTSCCCHHHHHHHHHHHHHHHTTTCEEEEEECCCSSCCTTCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEccCCChHHHHhhcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 4678898888777766643 356678999999999999999888887533221222223345666667788999997655
Q ss_pred -cCCCC-CCcH----------HHHHHHHHHHHHhCCCc-eEEE
Q 018252 297 -GDTIG-VGTP----------GTVVPMLEAVMAVVPVE-KLAV 326 (359)
Q Consensus 297 -~DT~G-~~~P----------~~v~~lv~~l~~~~p~~-~L~~ 326 (359)
.|=++ ...+ ..-.+++..+.+.+... +|.|
T Consensus 113 lfDDI~~~~~~~d~~~f~s~a~aQ~~l~N~v~~~l~~~~~l~~ 155 (447)
T 2xsa_A 113 LFDDIPSVLPEADRHRFDSFAEAQADLSNMVLRHLRGAGHVVF 155 (447)
T ss_dssp ECSSCCSSCCTTTTTTCSSHHHHHHHHHHHHHHHTTTSSEEEE
T ss_pred eccCCCCccchhhhhhhhhHHHHHHHHHHHHHHHhCCCCceEE
Confidence 34444 3322 22457778887777643 4554
No 251
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=88.39 E-value=12 Score=34.16 Aligned_cols=167 Identities=15% Similarity=0.019 Sum_probs=83.1
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCChHhHHHHHHcCCCEEEEe-cCCch--H
Q 018252 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIF-ASASE--A 227 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~~gie~a~~aGv~~V~i~-~s~S~--~ 227 (359)
.++++.|.++|.|.||+|.-..- ...+..++++.+++ .++.+..+.-....+ ++|++.+-+. ++.++ .
T Consensus 23 ~~~~~~l~~~GaD~ielG~S~Gv----t~~~~~~~v~~ir~-~~~Pivlm~y~~n~i----~~G~dg~iiPdLp~ee~~~ 93 (240)
T 1viz_A 23 DEQLEILCESGTDAVIIGGSDGV----TEDNVLRMMSKVRR-FLVPCVLEVSAIEAI----VPGFDLYFIPSVLNSKNAD 93 (240)
T ss_dssp HHHHHHHHTSCCSEEEECC--------CHHHHHHHHHHHTT-SSSCEEEECSCGGGC----CSCCSEEEEEEETTBSSGG
T ss_pred HHHHHHHHHcCCCEEEECCCCCC----CHHHHHHHHHHhhC-cCCCEEEecCccccc----cCCCCEEEEcccCcccChh
Confidence 45589999999999999972110 01123334444444 344444433232223 6788876553 23322 2
Q ss_pred HHHhhhcCCHHHHHHHHHHHHHHHHhCC-----CcEE--EEEeeeecCCCCC--C-------CCHHHHHHHHHHHHHCCc
Q 018252 228 FSKSNINCSIEDSLVRYRAVAHAAKVLS-----IPVR--GYVSCVVGCPVEG--A-------IPPSKVAYVAKELHDMGC 291 (359)
Q Consensus 228 ~~~~n~~~t~~e~l~~i~~~i~~Ak~~G-----~~V~--~~is~~fg~~~~~--r-------~~~e~l~~~a~~l~~~Ga 291 (359)
+. . ..-++.++++| +.+. +|+. -.|... + .+++.+..+++...-.+-
T Consensus 94 ~~---~-----------g~~~~a~~~~g~~~~~l~~i~~gy~l---~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~ 156 (240)
T 1viz_A 94 WI---V-----------GMHQKAMKEYGELMSMEEIVAEGYCI---ANPDCKAAALTEADADLNMDDIVAYARVSELLQL 156 (240)
T ss_dssp GT---T-----------HHHHHHHHHCHHHHHHSCEEEEEEEE---CCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTC
T ss_pred hh---c-----------chhHHHHHHcCCCCcceeeeecccEE---ECCCCceEEeeccCCCCCHHHHHHHHHhCcccCC
Confidence 21 0 01123466777 6653 3443 123221 0 245544444443332333
Q ss_pred CEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 292 FEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 292 d~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
.-|++.- .|.. ...++++.+++..+.+++.+= .|....--...+..||+.|=
T Consensus 157 ~~VYl~s-~G~~---~~~~~i~~i~~~~~~~Pv~vG----gGI~t~e~a~~~~~gAd~VI 208 (240)
T 1viz_A 157 PIFYLEY-SGVL---GDIEAVKKTKAVLETSTLFYG----GGIKDAETAKQYAEHADVIV 208 (240)
T ss_dssp SEEEEEC-TTSC---CCHHHHHHHHHTCSSSEEEEE----SSCCSHHHHHHHHTTCSEEE
T ss_pred CEEEEeC-CCcc---ChHHHHHHHHHhcCCCCEEEE----eccCCHHHHHHHHhCCCEEE
Confidence 5565544 6752 357788888887633454442 23333333344444998864
No 252
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=88.35 E-value=6.9 Score=36.54 Aligned_cols=118 Identities=12% Similarity=0.057 Sum_probs=67.2
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.+..+++++.+
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~A 91 (292)
T 2vc6_A 27 VEWQIEEGSFGLVPCGTTGESP-----TLSKSEHEQVVEITIKTANG-RVPVIAGA---------GSNSTAEAIAFVRHA 91 (292)
T ss_dssp HHHHHHTTCSEEETTSGGGTGG-----GSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCccHHHHHHHHHHH
Confidence 4556667887777666655543 34566666666666655543 24442211 233556777788888
Q ss_pred HHCCcCEEEE-cCCCCCCcHHHHHHHHHHHHHhCCCceEEE-E----eCCCCCcHHHHHH
Q 018252 287 HDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-H----LHDTYGQSLPNIL 340 (359)
Q Consensus 287 ~~~Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H----~HNd~GLAlANal 340 (359)
.++|+|.+-+ +=..-..+++.+.+.++++.+..+ +||-+ | .+.++...+---|
T Consensus 92 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiilYn~P~~tg~~l~~~~~~~L 150 (292)
T 2vc6_A 92 QNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAST-IPIIVYNIPGRSAIEIHVETLARI 150 (292)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeCccccCcCCCHHHHHHH
Confidence 8888875443 333333466777777777777654 44444 3 3445554443333
No 253
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=88.27 E-value=3.6 Score=40.07 Aligned_cols=141 Identities=13% Similarity=-0.008 Sum_probs=82.1
Q ss_pred HHHHHHcCCCEEEEecCC--------chHHH--HhhhcCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeee-ecCCCCCC
Q 018252 207 FEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCV-VGCPVEGA 273 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~--------S~~~~--~~n~~~t~~e~l~~i~~~i~~Ak~~-G~-~V~~~is~~-fg~~~~~r 273 (359)
.++|.++|.|-|.+-..- |+..+ ....|-+.++-.+.+.++++.+|+. |. .|.+-++.. +.......
T Consensus 173 A~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~ 252 (376)
T 1icp_A 173 ARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDT 252 (376)
T ss_dssp HHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCS
T ss_pred HHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCC
Confidence 346677999988876542 12211 1234556766666677777777664 32 555555521 10000124
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCC-CCCcHH-HHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-CCEE
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTI-GVGTPG-TVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS-PMHA 350 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~-~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG-a~~I 350 (359)
.+.+...++++.+.++|++-|.+..-. ....|. ...++++.+++.++. +|..=.- + ....+..+++.| ||.|
T Consensus 253 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~i-Pvi~~G~--i--~~~~a~~~l~~g~aD~V 327 (376)
T 1icp_A 253 NPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKG-TFIVAGG--Y--DREDGNRALIEDRADLV 327 (376)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCS-CEEEESS--C--CHHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCC-CEEEeCC--C--CHHHHHHHHHCCCCcEE
Confidence 467788999999999999988875311 001121 112456778888763 5544322 2 256778899998 8887
Q ss_pred ec
Q 018252 351 KP 352 (359)
Q Consensus 351 D~ 352 (359)
-.
T Consensus 328 ~~ 329 (376)
T 1icp_A 328 AY 329 (376)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 254
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=88.27 E-value=14 Score=34.18 Aligned_cols=184 Identities=15% Similarity=0.112 Sum_probs=105.1
Q ss_pred HHHHHHHHhCCCCEEEEecc------CCCCCcCCCCCHHHHHHHhhhc---CCCeEEEEeCC------hHhHHHHHHcCC
Q 018252 151 VELIRRLVSSGLPVVEATSF------VSPKWVPQLADARDVMEAVRDL---EGARLPVLTPN------LKGFEAAIAAGA 215 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~f------vspk~vPq~~D~~ev~~~l~~~---~~~~l~~l~~n------~~gie~a~~aGv 215 (359)
---++.++++|++.|=+|.. -.|+.. .-..++++..++.+ .+.-+++=.+. .+-+.+.+++|+
T Consensus 30 ~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~--~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~~~~~~~l~~aGa 107 (255)
T 2qiw_A 30 TWSAGLVEEAGFSGLTIGSHPVADATGSSDGE--NMNFADYMAVVKKITSAVSIPVSVDVESGYGLSPADLIAQILEAGA 107 (255)
T ss_dssp HHHHHHHHHTTCSCEEECHHHHHHHTTCCTTT--CSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEChHHHHHhCCCCCCC--CcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHHHHHHHHHHHcCC
Confidence 34566788899999999852 122211 13456666666532 22322222231 233555667899
Q ss_pred CEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCc--EEEEEeeeecCCCCCCC----CHHHHHHHHHHHHHC
Q 018252 216 KEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP--VRGYVSCVVGCPVEGAI----PPSKVAYVAKELHDM 289 (359)
Q Consensus 216 ~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~--V~~~is~~fg~~~~~r~----~~e~l~~~a~~l~~~ 289 (359)
.-|++-... |...+.=.+.++..++++.+++.+++.|++ |.+..-. +. .++. ..+.+++-++.+.++
T Consensus 108 ~gv~iEd~~---~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~-~~---~g~~~~~~~~~~ai~ra~a~~eA 180 (255)
T 2qiw_A 108 VGINVEDVV---HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDA-VK---LGADVFEDPMVEAIKRIKLMEQA 180 (255)
T ss_dssp CEEEECSEE---GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECH-HH---HCTTTSSSHHHHHHHHHHHHHHH
T ss_pred cEEEECCCC---CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEech-hh---ccCCcchHHHHHHHHHHHHHHHc
Confidence 999996553 221111136788899999998888887887 4443321 10 0111 257888888899999
Q ss_pred CcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCC-cHHHHHHHHHHcCCCEEec
Q 018252 290 GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG-QSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 290 Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~G-LAlANalaAv~AGa~~ID~ 352 (359)
|||.|.+. |+-+++.+.++.+. ++ +|+-+-.... + .-.-..-.--++|+++|-.
T Consensus 181 GAd~i~~e---~~~~~~~~~~i~~~----~~-~P~n~~~~~~-~~~p~~~~~eL~~lGv~~v~~ 235 (255)
T 2qiw_A 181 GARSVYPV---GLSTAEQVERLVDA----VS-VPVNITAHPV-DGHGAGDLATLAGLGVRRVTF 235 (255)
T ss_dssp TCSEEEEC---CCCSHHHHHHHHTT----CS-SCBEEECBTT-TBBTTBCHHHHHHTTCCEEEC
T ss_pred CCcEEEEc---CCCCHHHHHHHHHh----CC-CCEEEEecCC-CCCCCCCHHHHHHcCCCEEEE
Confidence 99999984 34344555555444 43 3444443322 2 0112233566778887743
No 255
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=88.27 E-value=11 Score=33.72 Aligned_cols=19 Identities=16% Similarity=-0.064 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHCCcCEEEE
Q 018252 278 KVAYVAKELHDMGCFEISL 296 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L 296 (359)
.+.+.++.+.++|+..|.+
T Consensus 85 ~~~~~i~~A~~lG~~~v~~ 103 (286)
T 3dx5_A 85 KCEQLAILANWFKTNKIRT 103 (286)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHhCCCEEEE
Confidence 4444555555556665544
No 256
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=88.26 E-value=2.1 Score=41.82 Aligned_cols=67 Identities=13% Similarity=0.106 Sum_probs=52.3
Q ss_pred HHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEE-EeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 280 AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 280 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
.+.++.+.++|++.|.| + .+...|..+.++++.+++.+|++++.+ ..+ ...-+..+.++||+.|.++
T Consensus 155 ~~~a~~~~~~G~d~i~i-~-~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~-----~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 155 IERVEELVKAHVDILVI-D-SAHGHSTRIIELIKKIKTKYPNLDLIAGNIV-----TKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHTTCSEEEE-C-CSCCSSHHHHHHHHHHHHHCTTCEEEEEEEC-----SHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEE-e-CCCCChHHHHHHHHHHHHHCCCCeEEEcCCC-----cHHHHHHHHhcCCCEEEEC
Confidence 45677788999999988 3 233578889999999999997778776 333 3567788999999999874
No 257
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=88.21 E-value=2 Score=38.85 Aligned_cols=71 Identities=18% Similarity=0.114 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEE--EeCChHhHHHHHHcCCCEEEEe
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPV--LTPNLKGFEAAIAAGAKEVAIF 221 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~--l~~n~~gie~a~~aGv~~V~i~ 221 (359)
.-+++++.+.++|++.|-+........ ..-.+.+. .+.+++.-++.+.+ -+++.++++.++++|++.|.+-
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~-~~~~~~~~-i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEM-IRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTC-SSCCCHHH-HHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCS
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccC-CCcccHHH-HHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehh
Confidence 457899999999999998764321110 11124443 34444433444433 3457789999999999988773
No 258
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=88.19 E-value=1.6 Score=38.83 Aligned_cols=128 Identities=18% Similarity=0.169 Sum_probs=70.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC----Ch----------------
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP----NL---------------- 204 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~----n~---------------- 204 (359)
++...-.+.++.+.++|++ ||+... .+ .+....++.+..+...+ .+.+..+ |.
T Consensus 7 ~p~~~l~~~l~~~~~~G~~-vEl~~~-~~----~~~~~~~~~~~~~~~~~-~~~~h~~~~~~~l~~~~~~~r~~~~~~~~ 79 (254)
T 3ayv_A 7 FPLSRAEEALPRLQALGLG-AEVYLD-PA----LLEEDALFQSLRRRFSG-KLSVHLPFWNLDLLSPDPEVRGLTLRRLL 79 (254)
T ss_dssp EEGGGHHHHHHHHHHHTCE-EEEECC-GG----GTTCHHHHHHHHHHCCS-CEEEECCCTTCCTTCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC-EEEecc-cc----ccCcHHHHHHHHHHhCC-CeEEecCccCCCCCCCCHHHHHHHHHHHH
Confidence 3444556778888899999 999532 11 12222234344333324 5555543 11
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
+.++.|.+.|++.|.+.................+...+.+..+.++|++.|+++. +... ...+++.+.++++
T Consensus 80 ~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lEn~------~~~~~~~~~~l~~ 151 (254)
T 3ayv_A 80 FGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLL--LENS------HEPHPEALRPVLE 151 (254)
T ss_dssp HHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEE--EECS------SCSSGGGTHHHHH
T ss_pred HHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEE--EcCC------CCCCHHHHHHHHH
Confidence 1234455679999887644221100000011245667778889999999998752 3211 1236677777777
Q ss_pred HHH
Q 018252 285 ELH 287 (359)
Q Consensus 285 ~l~ 287 (359)
.+-
T Consensus 152 ~v~ 154 (254)
T 3ayv_A 152 AHA 154 (254)
T ss_dssp HHT
T ss_pred hcC
Confidence 654
No 259
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=88.17 E-value=2.2 Score=40.31 Aligned_cols=82 Identities=15% Similarity=0.064 Sum_probs=67.8
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEEEe-CCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~H~-HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.| .+++++-.++++.+.+... .+++-++. +|+.--++..+..|-++|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 106 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYG 106 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCC
Confidence 579999999999999999999999999998 4678888888988887653 46666654 557777888899999999
Q ss_pred CCEEece
Q 018252 347 PMHAKPC 353 (359)
Q Consensus 347 a~~ID~t 353 (359)
|+.|=+.
T Consensus 107 adavlv~ 113 (303)
T 2wkj_A 107 FDAVSAV 113 (303)
T ss_dssp CSEEEEE
T ss_pred CCEEEec
Confidence 9987443
No 260
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=88.14 E-value=2.2 Score=40.26 Aligned_cols=82 Identities=22% Similarity=0.098 Sum_probs=68.0
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEE-EeCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAV-HLHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~-H~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++=|.| .+++++-.++++.+.+... .+++-+ -++|+.--++..+..|-++|
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~G 111 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAG 111 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999988 4678888888888887653 355555 45678888899999999999
Q ss_pred CCEEece
Q 018252 347 PMHAKPC 353 (359)
Q Consensus 347 a~~ID~t 353 (359)
|+.+=+.
T Consensus 112 adavlv~ 118 (304)
T 3cpr_A 112 ADGLLVV 118 (304)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9987443
No 261
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=88.10 E-value=1.8 Score=41.55 Aligned_cols=81 Identities=9% Similarity=-0.043 Sum_probs=67.7
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEE-EeCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAV-HLHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~-H~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.| .+++++-.++++.+.+... .+++-+ -++|+..-++..+..|-++|
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 129 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAG 129 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999998 4678888888888887654 356555 45678888889999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.|=+
T Consensus 130 adavlv 135 (332)
T 2r8w_A 130 ADALLL 135 (332)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998743
No 262
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=88.03 E-value=11 Score=38.84 Aligned_cols=158 Identities=15% Similarity=0.125 Sum_probs=98.2
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc-CCCeEEEEeCChHhHH---HHHHcCCCEEEE
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKGFE---AAIAAGAKEVAI 220 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~-~~~~l~~l~~n~~gie---~a~~aGv~~V~i 220 (359)
++..++..| +.-.+.|++.|=+.| +.. -.|..++.+.+.+. .++.+.+-+.+.++++ ..+++ .|.|.+
T Consensus 240 lTekD~~dl-~f~~~~~vD~ia~Sf-Vr~-----a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~-sDgImV 311 (550)
T 3gr4_A 240 VSEKDIQDL-KFGVEQDVDMVFASF-IRK-----ASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEA-SDGIMV 311 (550)
T ss_dssp SCHHHHHHH-HHHHHTTCSEEEETT-CCS-----HHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHH-SSEEEE
T ss_pred CCHHHHHHH-HHHHHcCCCEEEecC-CCC-----HHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHh-CCEEEE
Confidence 445555554 677889999997754 331 14556666666543 4577888887776654 33433 465554
Q ss_pred ecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCCCCCHHHHHHHHHHHHHCCcCEEEE-cC
Q 018252 221 FASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-PVEGAIPPSKVAYVAKELHDMGCFEISL-GD 298 (359)
Q Consensus 221 ~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-~~~~r~~~e~l~~~a~~l~~~Gad~I~L-~D 298 (359)
- -.|+-.. ...++.....+.++..|+++|..|... +...-. -...+-+..++.+++..+.+ |+|.|.| +.
T Consensus 312 a--RGDLgve----i~~e~vp~~Qk~iI~~c~~agkpVi~A-TQMLeSMi~~p~PTRAEvsDVanAvld-G~DavMLSgE 383 (550)
T 3gr4_A 312 A--RGDLGIE----IPAEKVFLAQKMMIGRCNRAGKPVICA-TQMLESMIKKPRPTRAEGSDVANAVLD-GADCIMLSGE 383 (550)
T ss_dssp E--HHHHHHH----SCGGGHHHHHHHHHHHHHHHTCCEEEE-SSTTGGGGTCSSCCHHHHHHHHHHHHH-TCSEEEESHH
T ss_pred c--cchhccc----CCHHHHHHHHHHHHHHHHHhCCCEEEE-ehhhHHhhcCCCccHHHHHHHHHHHHc-CCcEEEEecC
Confidence 2 2222111 223445555688999999999987321 110000 01224577888999998887 9999999 56
Q ss_pred CCCCCcHHHHHHHHHHHHHh
Q 018252 299 TIGVGTPGTVVPMLEAVMAV 318 (359)
Q Consensus 299 T~G~~~P~~v~~lv~~l~~~ 318 (359)
|.---.|.+..+.+..+.+.
T Consensus 384 TA~G~yPveaV~~M~~I~~~ 403 (550)
T 3gr4_A 384 TAKGDYPLEAVRMQHLIARE 403 (550)
T ss_dssp HHTCSCHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHH
Confidence 77777898888777776643
No 263
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=88.02 E-value=7 Score=37.94 Aligned_cols=117 Identities=12% Similarity=0.007 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC--------------CCC-----------------C-C-CC-------H
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC--------------PVE-----------------G-A-IP-------P 276 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~--------------~~~-----------------~-r-~~-------~ 276 (359)
.++.++.++++++.++++|-++...|.+. |- |-+ . + .+ .
T Consensus 82 ~d~~i~~~k~l~~avH~~G~~i~~QL~H~-Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii 160 (361)
T 3gka_A 82 SPEQVDGWRLVTDAVHAAGGRIFLQLWHV-GRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVV 160 (361)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCeEEEeeccC-CccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHH
Confidence 35667888899999999999887777641 10 000 0 0 11 2
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCC-------------------CCCc---HHHHHHHHHHHHHhCCCceEEEEeCCCC--
Q 018252 277 SKVAYVAKELHDMGCFEISLGDTI-------------------GVGT---PGTVVPMLEAVMAVVPVEKLAVHLHDTY-- 332 (359)
Q Consensus 277 e~l~~~a~~l~~~Gad~I~L~DT~-------------------G~~~---P~~v~~lv~~l~~~~p~~~L~~H~HNd~-- 332 (359)
+.+.+.++++.++|.|.|.|-=.- |-.. +..+.++++++++.++..+|++-.+-+-
T Consensus 161 ~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~ 240 (361)
T 3gka_A 161 AAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDA 240 (361)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCS
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEeccccccc
Confidence 345666777889999987774333 3321 3457789999999886437777665321
Q ss_pred -Cc--------HHHHHHHHHHcCCCEEecee
Q 018252 333 -GQ--------SLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 333 -GL--------AlANalaAv~AGa~~ID~tl 354 (359)
|+ ++.-+.+.-++|+++|+++-
T Consensus 241 ~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~ 271 (361)
T 3gka_A 241 HTMGDSDPAATFGHVARELGRRRIAFLFARE 271 (361)
T ss_dssp SSCCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCCcHHHHHHHHHHHHHcCCCEEEECC
Confidence 21 33444555678999999764
No 264
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=87.98 E-value=2.9 Score=40.19 Aligned_cols=92 Identities=16% Similarity=0.111 Sum_probs=63.8
Q ss_pred HhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc----------CCCCCC---cHHHHHHHHHHHHHh
Q 018252 252 KVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG----------DTIGVG---TPGTVVPMLEAVMAV 318 (359)
Q Consensus 252 k~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~----------DT~G~~---~P~~v~~lv~~l~~~ 318 (359)
+..|.++.++|. | .+|+.+.+.++.+.++|+|.|.|- |-.|.. .|..+.++++++++.
T Consensus 54 ~~~~~p~~vQL~---g------~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~ 124 (350)
T 3b0p_A 54 RPEEHPIALQLA---G------SDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA 124 (350)
T ss_dssp CGGGCSEEEEEE---C------SCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEeC---C------CCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHH
Confidence 344666666653 3 268899999999999999976653 445554 488899999999988
Q ss_pred CCCceEEEEe---CCCCC---cHHHHHHHHHHcCCCEEece
Q 018252 319 VPVEKLAVHL---HDTYG---QSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 319 ~p~~~L~~H~---HNd~G---LAlANalaAv~AGa~~ID~t 353 (359)
+. +++.+-. -++.. ..+.-+..+.++|++.|.++
T Consensus 125 v~-~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 125 VR-VPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp CS-SCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hC-CceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEe
Confidence 73 5666622 23322 23455667778999999875
No 265
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=87.98 E-value=2.2 Score=40.99 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=52.2
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEc--CCCCCCc------HHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHH
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLG--DTIGVGT------PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ 344 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~--DT~G~~~------P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~ 344 (359)
+.+.+...++++.+.++|++.|-+. |-.+..+ .....++++.+++..|+++|.+.+.-.+|. ......|.+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~-~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGS-VHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBC-HHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCccc-HHHHHHHHh
Confidence 5678888888888888888888874 3222221 123455677777777777777764222222 456777888
Q ss_pred cCCCEEece
Q 018252 345 VSPMHAKPC 353 (359)
Q Consensus 345 AGa~~ID~t 353 (359)
+|++.|...
T Consensus 105 aGvd~v~I~ 113 (345)
T 1nvm_A 105 AGARVVRVA 113 (345)
T ss_dssp HTCCEEEEE
T ss_pred CCcCEEEEE
Confidence 888887654
No 266
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=87.96 E-value=8.5 Score=35.48 Aligned_cols=114 Identities=9% Similarity=0.018 Sum_probs=65.2
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee-----cCCCC------C-
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV-----GCPVE------G- 272 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~f-----g~~~~------~- 272 (359)
+-++.+.++|.+.|.++...... -.+.+ ..++.+.++++|+++.. +...+ ..|+. .
T Consensus 33 ~~l~~~a~~G~~~VEl~~~~~~~----~~~~~-------~~~~~~~l~~~GL~v~~-~~~~~~~~~~~~p~~~~~~~~~~ 100 (303)
T 3l23_A 33 ANLRKVKDMGYSKLELAGYGKGA----IGGVP-------MMDFKKMAEDAGLKIIS-SHVNPVDTSISDPFKAMIFKYSK 100 (303)
T ss_dssp HHHHHHHHTTCCEEEECCEETTE----ETTEE-------HHHHHHHHHHTTCEEEE-EECCCBCTTCSSTTTTBCCSCCT
T ss_pred HHHHHHHHcCCCEEEeccccCcc----cCCCC-------HHHHHHHHHHcCCeEEE-EecccccccccCcccccccccch
Confidence 34677788999999886421000 01112 23555667789998742 21111 01111 0
Q ss_pred ---CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHh---C--CCce--EEEEeCC
Q 018252 273 ---AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAV---V--PVEK--LAVHLHD 330 (359)
Q Consensus 273 ---r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~---~--p~~~--L~~H~HN 330 (359)
....+++.+.++.+.++|+..|.+.-.....++.....+++.+++. . -++. |.+|.|+
T Consensus 101 ~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 101 EVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 0114567778888889999999885221123556666666555542 1 2578 9999997
No 267
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=87.91 E-value=1.2 Score=42.37 Aligned_cols=81 Identities=7% Similarity=-0.099 Sum_probs=67.3
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCC-CceEEEEeCCCCCcHHHHHHHHHHcCC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQVSP 347 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~GLAlANalaAv~AGa 347 (359)
+..|.+-+.++++.+.+.|++-|.++-|.|= ++.++-.++++.+.+... .+++-++.-++.--++..+..|-++||
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Ga 107 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGA 107 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999999986 567888888888887653 467777765577777888889999999
Q ss_pred CEEec
Q 018252 348 MHAKP 352 (359)
Q Consensus 348 ~~ID~ 352 (359)
+.|=+
T Consensus 108 davlv 112 (316)
T 3e96_A 108 DAVMI 112 (316)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 88754
No 268
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.90 E-value=1.6 Score=41.49 Aligned_cols=81 Identities=10% Similarity=-0.050 Sum_probs=68.1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhC-CCceEEEE-eCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVV-PVEKLAVH-LHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~L~~H-~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.|= ++.++-.++++.+.+.. +.+++-+| ++|+.--++..+..|-++|
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~G 118 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGG 118 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999999996 56888888888888765 34566665 4678888999999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.|=+
T Consensus 119 adavlv 124 (314)
T 3qze_A 119 ADACLL 124 (314)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 987744
No 269
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=87.87 E-value=7 Score=37.87 Aligned_cols=67 Identities=15% Similarity=0.027 Sum_probs=49.8
Q ss_pred HHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 280 AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 280 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
.+.++.+.++|+|.|.|- + +...|..+.+.++.+++.++ +++.+..= ....-+..++++||+.|.++
T Consensus 107 ~e~a~~l~eaGad~I~ld-~-a~G~~~~~~~~i~~i~~~~~-~~Vivg~v----~t~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLD-S-AHGHSLNIIRTLKEIKSKMN-IDVIVGNV----VTEEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHHTTCSEEEEC-C-SCCSBHHHHHHHHHHHHHCC-CEEEEEEE----CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCcCeEEEe-C-CCCCcHHHHHHHHHHHHhcC-CcEEEccC----CCHHHHHHHHHcCcCEEEEe
Confidence 577888999999988763 2 23467888899999999884 56655221 23566788999999999874
No 270
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=87.83 E-value=7.5 Score=36.16 Aligned_cols=79 Identities=13% Similarity=0.069 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHHHHHCCcC-EEEE--c--CCCC---C-CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc--HHHHHHHH
Q 018252 274 IPPSKVAYVAKELHDMGCF-EISL--G--DTIG---V-GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ--SLPNILIS 342 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad-~I~L--~--DT~G---~-~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL--AlANalaA 342 (359)
.+++.+.+.++.+.++|+| .|.| . -+-| . ..|+.+.++++++++..+ +++.+-.--++.. ...-+..+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~-~Pv~vKi~~~~~~~~~~~~a~~~ 181 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFT-KPLGVKLPPYFDLVHFDIMAEIL 181 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCC-SCEEEEECCCCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcC-CCEEEEECCCCCHHHHHHHHHHH
Confidence 4789999999999999999 6655 2 1111 1 378899999999998763 5676655433321 12226677
Q ss_pred HHcCCCEEece
Q 018252 343 LQVSPMHAKPC 353 (359)
Q Consensus 343 v~AGa~~ID~t 353 (359)
.++|++.|.++
T Consensus 182 ~~~G~d~i~v~ 192 (311)
T 1jub_A 182 NQFPLTYVNSV 192 (311)
T ss_dssp TTSCCCEEEEC
T ss_pred HHcCCcEEEec
Confidence 88999998764
No 271
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=87.81 E-value=1.4 Score=40.03 Aligned_cols=62 Identities=11% Similarity=-0.031 Sum_probs=49.0
Q ss_pred HHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 282 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
-++++.++|+|.|.| |+.....|..+.++++.+++. ++.+..-+|+ ...+..|.++|+++|=
T Consensus 93 ~i~~~~~aGad~I~l-~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig 154 (229)
T 3q58_A 93 DVDALAQAGADIIAF-DASFRSRPVDIDSLLTRIRLH--GLLAMADCST-----VNEGISCHQKGIEFIG 154 (229)
T ss_dssp HHHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--TCEEEEECSS-----HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEE-CccccCChHHHHHHHHHHHHC--CCEEEEecCC-----HHHHHHHHhCCCCEEE
Confidence 356678899998854 777777899999999999874 4566666664 6778899999999993
No 272
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=87.77 E-value=2 Score=40.79 Aligned_cols=81 Identities=10% Similarity=-0.062 Sum_probs=66.1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEEEeCCCCCcHHHHHHHHHHcCC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQVSP 347 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~GLAlANalaAv~AGa 347 (359)
+..|.+.+.++++.+.+.|++-|.++-|.| .+++++-.++++.+.+... .+++-++.=.+.--++..+..|-++||
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Ga 107 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGA 107 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999988 4678888888888887653 466666554355567788888999999
Q ss_pred CEEec
Q 018252 348 MHAKP 352 (359)
Q Consensus 348 ~~ID~ 352 (359)
+.|=.
T Consensus 108 davlv 112 (314)
T 3d0c_A 108 DCVMI 112 (314)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 97744
No 273
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=87.74 E-value=5.1 Score=36.40 Aligned_cols=131 Identities=17% Similarity=0.086 Sum_probs=77.3
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCChHhHHHHHHcCCCEEEEecCCchHHHH
Q 018252 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSK 230 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~ 230 (359)
.+.++.|.++|++.|=+++-... ++-.......+.+.+++..++.+.. ....-++.+...|+++|.+..+-...
T Consensus 56 ~~aa~~L~~ag~d~i~~aCtsas-~~~G~~~~~~~~~~l~~~~~iPv~~--~~~A~~~al~~~g~~rvglltpy~~~--- 129 (240)
T 3ixl_A 56 VDHARRLQKQGAAVVSLMCTSLS-FYRGAAFNAALTVAMREATGLPCTT--MSTAVLNGLRALGVRRVALATAYIDD--- 129 (240)
T ss_dssp HHHHHHHHHTTEEEEEECCHHHH-HTTCHHHHHHHHHHHHHHHSSCEEE--HHHHHHHHHHHTTCSEEEEEESSCHH---
T ss_pred HHHHHHhccCCCCEEEECCcHHH-HhcccchHHHHHHHHHhccCCCEEC--HHHHHHHHHHHhCCCEEEEEeCChHH---
Confidence 44478899999999998752100 0000011124556666544544433 22233455556799999998763221
Q ss_pred hhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC---CCCCCHHHHHHHHHH-H-HHCCcCEEEEcCCCC
Q 018252 231 SNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV---EGAIPPSKVAYVAKE-L-HDMGCFEISLGDTIG 301 (359)
Q Consensus 231 ~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~---~~r~~~e~l~~~a~~-l-~~~Gad~I~L~DT~G 301 (359)
.-+ .+.++.++.|++|..--+ ++..+ .++.+++.+.+++++ + .+-|+|.|.|.-|.=
T Consensus 130 ---------~~~---~~~~~l~~~Giev~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~adaivL~CT~l 191 (240)
T 3ixl_A 130 ---------VNE---RLAAFLAEESLVPTGCRS--LGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLSSGGL 191 (240)
T ss_dssp ---------HHH---HHHHHHHHTTCEEEEEEE--CCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEECTTS
T ss_pred ---------HHH---HHHHHHHHCCCEEecccc--CCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCEEEEeCCCC
Confidence 111 233445567998754332 33332 246789999999999 7 677999999996653
No 274
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=87.69 E-value=5.1 Score=37.43 Aligned_cols=104 Identities=15% Similarity=0.132 Sum_probs=64.9
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-r~pvi~Gv---------g~~~t~~ai~la~~a 92 (291)
T 3a5f_A 28 IEWHIKSKTDAIIVCGTTGEAT-----TMTETERKETIKFVIDKVNK-RIPVIAGT---------GSNNTAASIAMSKWA 92 (291)
T ss_dssp HHHHHHTTCCEEEESSGGGTGG-----GSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CcccHHHHHHHHHHH
Confidence 5566778888888777666654 34566666666666666543 25553222 234667788888888
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+. =..-..+++.+.+.++++.+..+ +||-+
T Consensus 93 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~-lPiil 132 (291)
T 3a5f_A 93 ESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVS-TPIII 132 (291)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCC-SCEEE
T ss_pred HhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 88888865443 33333466777777777776654 45444
No 275
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=87.67 E-value=9.4 Score=37.48 Aligned_cols=117 Identities=10% Similarity=0.090 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC---------------CC----C-------------CCCCH--------
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC---------------PV----E-------------GAIPP-------- 276 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~---------------~~----~-------------~r~~~-------- 276 (359)
.++.++.++.+++.+++.|-++...|.+. |- |- . ....|
T Consensus 88 ~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI 166 (402)
T 2hsa_B 88 TKEQVREWKKIVDVVHAKGAVIFCQLWHV-GRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEI 166 (402)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEECC-TTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGH
T ss_pred CHHHHHHHHHHHHHHHhcCCeEEEEeccC-CcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHH
Confidence 35567778888888899998887777531 10 00 0 00123
Q ss_pred ----HHHHHHHHHHHHCCcCEEEEc-------------------CCCCCCc---HHHHHHHHHHHHHhCCCceEEEEeCC
Q 018252 277 ----SKVAYVAKELHDMGCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVPVEKLAVHLHD 330 (359)
Q Consensus 277 ----e~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p~~~L~~H~HN 330 (359)
+.+.+.++.+.++|.|.|.|- |-.|... +..+.++++++++.++..+|++-..-
T Consensus 167 ~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~ 246 (402)
T 2hsa_B 167 SQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSP 246 (402)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECS
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEecc
Confidence 577788888899999977652 3344333 55588999999999864478876543
Q ss_pred C-------CCc----HHHHHHHHHHcC------CCEEecee
Q 018252 331 T-------YGQ----SLPNILISLQVS------PMHAKPCF 354 (359)
Q Consensus 331 d-------~GL----AlANalaAv~AG------a~~ID~tl 354 (359)
+ .|. ++.-+.+.-++| +++|+++-
T Consensus 247 ~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~ 287 (402)
T 2hsa_B 247 AIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQ 287 (402)
T ss_dssp SCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEec
Confidence 2 223 333444555788 99999863
No 276
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=87.64 E-value=1.8 Score=40.67 Aligned_cols=80 Identities=10% Similarity=0.008 Sum_probs=68.2
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhC-CCceEEEEe-CCCCCcHHHHHHHHHHcCC
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVV-PVEKLAVHL-HDTYGQSLPNILISLQVSP 347 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~L~~H~-HNd~GLAlANalaAv~AGa 347 (359)
..|.+.+.++++.+.+.|++-|.++=|.|= ++.++-.++++.+.+.. +.+++-+|. +|+.--++..+..|-++||
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCC
Confidence 789999999999999999999999999986 45788888888888765 446777776 7888999999999999999
Q ss_pred CEEec
Q 018252 348 MHAKP 352 (359)
Q Consensus 348 ~~ID~ 352 (359)
+.|=.
T Consensus 99 davlv 103 (292)
T 3daq_A 99 DAIML 103 (292)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98754
No 277
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=87.61 E-value=1.8 Score=41.19 Aligned_cols=81 Identities=16% Similarity=0.080 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEEEe-CCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~H~-HNd~GLAlANalaAv~AG 346 (359)
+..|.+-+.++++.+.+.|++-|.++-|.| .++.++-.++++.+.+... .+++-+|. +|+..-++..+..|-++|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 102 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFG 102 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999 4778888999999888763 46666664 678888888999999999
Q ss_pred C-CEEec
Q 018252 347 P-MHAKP 352 (359)
Q Consensus 347 a-~~ID~ 352 (359)
+ +.|=.
T Consensus 103 a~davlv 109 (311)
T 3h5d_A 103 GFAAGLA 109 (311)
T ss_dssp CCSEEEE
T ss_pred CCcEEEE
Confidence 7 87643
No 278
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=87.60 E-value=0.47 Score=44.74 Aligned_cols=126 Identities=14% Similarity=0.017 Sum_probs=83.9
Q ss_pred HhHHHHHH---cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCCCCCHHHHH
Q 018252 205 KGFEAAIA---AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-PVEGAIPPSKVA 280 (359)
Q Consensus 205 ~gie~a~~---aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-~~~~r~~~e~l~ 280 (359)
+.++..++ .=+|-+.+--.++-++ .++++.++.++++|+.|. +|. ..+--.....+.
T Consensus 53 ~~~~DlLe~ag~yID~lKfg~GTs~l~-------------~~l~ekI~l~~~~gV~v~------~GGTlfE~~l~qg~~~ 113 (276)
T 1u83_A 53 QFFKDAIAGASDYIDFVKFGWGTSLLT-------------KDLEEKISTLKEHDITFF------FGGTLFEKYVSQKKVN 113 (276)
T ss_dssp HHHHHHHHHHGGGCCEEEECTTGGGGC-------------TTHHHHHHHHHHTTCEEE------ECHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhhhhcceEEecCcchhhh-------------HHHHHHHHHHHHcCCeEe------CCcHHHHHHHHcCcHH
Confidence 44444444 2367777755544332 116788999999999872 332 111011112566
Q ss_pred HHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEE-------EEeCCCCCcHHHHHHHHHHcCCCEE
Q 018252 281 YVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLA-------VHLHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 281 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~-------~H~HNd~GLAlANalaAv~AGa~~I 350 (359)
++.+.+.+.|.+.|-+.|..--+.+.+-.++|+.+++.+. +.-+ ...=-+...-+..+...++|||+.|
T Consensus 114 ~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~f~-Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~V 189 (276)
T 1u83_A 114 EFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDEFL-VLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKV 189 (276)
T ss_dssp HHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTTSE-EEEECSCCC------CCSTHHHHHHHHHHHHTEEEE
T ss_pred HHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhhcE-EeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEE
Confidence 7888888999999999999999999999999998877652 1111 1333566777888999999999986
No 279
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=87.59 E-value=12 Score=33.43 Aligned_cols=18 Identities=11% Similarity=0.209 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHhCCCc
Q 018252 240 SLVRYRAVAHAAKVLSIP 257 (359)
Q Consensus 240 ~l~~i~~~i~~Ak~~G~~ 257 (359)
.++.++..++.|+++|.+
T Consensus 86 ~~~~~~~~i~~a~~lG~~ 103 (290)
T 2qul_A 86 GTEYVKRLLDDCHLLGAP 103 (290)
T ss_dssp HHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 344444444444444444
No 280
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=87.59 E-value=4.4 Score=38.29 Aligned_cols=144 Identities=15% Similarity=0.053 Sum_probs=89.2
Q ss_pred EEEEeC-ChHhHHHHHHcCCCEEEEec-CCchHHHHhhh-cCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC
Q 018252 197 LPVLTP-NLKGFEAAIAAGAKEVAIFA-SASEAFSKSNI-NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 273 (359)
Q Consensus 197 l~~l~~-n~~gie~a~~aGv~~V~i~~-s~S~~~~~~n~-~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r 273 (359)
+..++. +.-....+-++|++-|.+.- +.+-.+-.-.. -.|.++.+..++.+.+.+ .+.|.+.+ |++.-
T Consensus 17 i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~---~~PviaD~------d~Gyg 87 (290)
T 2hjp_A 17 FTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTV---SIPLIADI------DTGFG 87 (290)
T ss_dssp EEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTC---SSCEEEEC------TTTTS
T ss_pred EEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEEEC------CCCCC
Confidence 444443 22333444557999888752 23222211111 257888887777665433 45554333 22222
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCC------------CCcH-HHHHHHHHHHHHhC--CCceEEEEeCCC-----CC
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIG------------VGTP-GTVVPMLEAVMAVV--PVEKLAVHLHDT-----YG 333 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G------------~~~P-~~v~~lv~~l~~~~--p~~~L~~H~HNd-----~G 333 (359)
+++.+.+.++++.++|+..|.|-|..+ ...| +++.+.|+++++.. ++..|-.-.-.. +-
T Consensus 88 -~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~ 166 (290)
T 2hjp_A 88 -NAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQ 166 (290)
T ss_dssp -SHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHH
T ss_pred -CHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHH
Confidence 889999999999999999999999973 1344 46677787777763 444455544333 23
Q ss_pred cHHHHHHHHHHcCCCEE
Q 018252 334 QSLPNILISLQVSPMHA 350 (359)
Q Consensus 334 LAlANalaAv~AGa~~I 350 (359)
-++.-+.+-.+|||+.|
T Consensus 167 ~ai~Ra~ay~eAGAd~i 183 (290)
T 2hjp_A 167 EAVRRGQAYEEAGADAI 183 (290)
T ss_dssp HHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHcCCcEE
Confidence 46778889999999976
No 281
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=87.57 E-value=1.6 Score=40.93 Aligned_cols=82 Identities=13% Similarity=-0.010 Sum_probs=67.6
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEEE-eCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVH-LHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~H-~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.| .+++++-.++++.+.+... .+++-+| ++|+.--++..+..|-++|
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 95 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVG 95 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999988 4668888888888887654 3565554 5677888888999999999
Q ss_pred CCEEece
Q 018252 347 PMHAKPC 353 (359)
Q Consensus 347 a~~ID~t 353 (359)
|+.|=+.
T Consensus 96 adavlv~ 102 (294)
T 2ehh_A 96 ADGALVV 102 (294)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9987443
No 282
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=87.52 E-value=5.5 Score=37.20 Aligned_cols=101 Identities=10% Similarity=0.081 Sum_probs=67.4
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+. | |. .|. +..+.++.+++++.+
T Consensus 26 v~~li~~Gv~gl~v~GtTGE~~-----~Ls~eEr~~v~~~~~~~~~--g--Vi------aGv---g~~~t~~ai~la~~A 87 (288)
T 2nuw_A 26 AKNLLEKGIDAIFVNGTTGLGP-----ALSKDEKRQNLNALYDVTH--K--LI------FQV---GSLNLNDVMELVKFS 87 (288)
T ss_dssp HHHHHHTTCCEEEETSTTTTGG-----GSCHHHHHHHHHHHTTTCS--C--EE------EEC---CCSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhC--C--eE------Eee---CCCCHHHHHHHHHHH
Confidence 5666778999988887777764 3456665544444444332 3 32 221 345778899999999
Q ss_pred HHCCcCEEEEcCCC-CC-CcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLGDTI-GV-GTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~DT~-G~-~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+.=.. -. .+++.+.+.++++.+..+ +||-+
T Consensus 88 ~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPiil 128 (288)
T 2nuw_A 88 NEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISS-HSLYI 128 (288)
T ss_dssp HTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCC-SCEEE
T ss_pred HhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 99999977664333 23 477889999999888765 45544
No 283
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=87.47 E-value=4.9 Score=39.10 Aligned_cols=106 Identities=9% Similarity=0.005 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHh-----CCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCC------------
Q 018252 239 DSLVRYRAVAHAAKV-----LSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIG------------ 301 (359)
Q Consensus 239 e~l~~i~~~i~~Ak~-----~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G------------ 301 (359)
+.+.++...+..+++ ..++|.+-++ | ..+.+++.++++.+.++|+|.|.+-.|.-
T Consensus 199 ~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~-----p---~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~ 270 (367)
T 3zwt_A 199 AELRRLLTKVLQERDGLRRVHRPAVLVKIA-----P---DLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRS 270 (367)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGCCEEEEEEC-----S---CCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTT
T ss_pred HHHHHHHHHHHHHHhhccccCCceEEEEeC-----C---CCCHHHHHHHHHHHHHcCCCEEEEeCCCccccccccccccc
Confidence 444555444444432 3566655554 2 24668899999999999999999887751
Q ss_pred ---CCc----HHHHHHHHHHHHHhCC-CceEEEEeCCCCCcHHHHHHHHHHcCCCEEeceee
Q 018252 302 ---VGT----PGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 302 ---~~~----P~~v~~lv~~l~~~~p-~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~ 355 (359)
... +....+++..+++.++ .++|-.=+-=. ...-+++++++||+.|-..-.
T Consensus 271 ~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~---s~~da~~~l~~GAd~V~vgra 329 (367)
T 3zwt_A 271 ETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS---SGQDALEKIRAGASLVQLYTA 329 (367)
T ss_dssp SSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC---SHHHHHHHHHHTCSEEEESHH
T ss_pred ccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC---CHHHHHHHHHcCCCEEEECHH
Confidence 111 2224578888888885 45554433222 236677888899998876543
No 284
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=87.44 E-value=5.7 Score=37.48 Aligned_cols=104 Identities=9% Similarity=-0.008 Sum_probs=63.8
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-+.+.-++.|.+ -.|.+|-.+-++.+++.+. ..+.|.+.+ +..+.++.+++++.+
T Consensus 41 v~~li~~Gv~Gl~v~GtTGE~~-----~Ls~~Er~~v~~~~~~~~~-gr~pviaGv---------g~~~t~~ai~la~~A 105 (307)
T 3s5o_A 41 LHKLGTFPFRGFVVQGSNGEFP-----FLTSSERLEVVSRVRQAMP-KNRLLLAGS---------GCESTQATVEMTVSM 105 (307)
T ss_dssp HHHHTTSCCSEEEESSGGGTGG-----GSCHHHHHHHHHHHHHTSC-TTSEEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccchh-----hCCHHHHHHHHHHHHHHcC-CCCcEEEec---------CCCCHHHHHHHHHHH
Confidence 4455567888888877776654 3455665555554444432 123442211 234667788888888
Q ss_pred HHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+.=..=. .+++.+.+.++++.+..+ +||-+
T Consensus 106 ~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~-lPiil 147 (307)
T 3s5o_A 106 AQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSP-IPVVL 147 (307)
T ss_dssp HHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCS-SCEEE
T ss_pred HHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcC-CCEEE
Confidence 8889887666433222 477788888888887764 34443
No 285
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=87.41 E-value=13 Score=36.67 Aligned_cols=124 Identities=12% Similarity=0.057 Sum_probs=68.8
Q ss_pred hHHHHHHcCCCEEEEecCCchHHHHh-hh--cCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC---------
Q 018252 206 GFEAAIAAGAKEVAIFASASEAFSKS-NI--NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA--------- 273 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S~~~~~~-n~--~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r--------- 273 (359)
.++...++|+..|++-+-+.+.-..- -. |. ..++.+..+++.|+++|++|...+- ++...+.+
T Consensus 53 ~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~---~d~~~~~~~a~~Ak~~GLkVlldfH--ysD~WadPg~Q~~P~aW 127 (399)
T 1ur4_A 53 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGN---NDLEKAIQIGKRATANGMKLLADFH--YSDFWADPAKQKAPKAW 127 (399)
T ss_dssp HHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTC---CCHHHHHHHHHHHHHTTCEEEEEEC--SSSSCCSSSCCCCCGGG
T ss_pred HHHHHHHCCCCEEEEeeecCCcccccCccCCCC---CCHHHHHHHHHHHHHCCCEEEEEec--cCCccCCcccccCcccc
Confidence 45666678999888744322210000 00 11 1256778899999999999876542 22111111
Q ss_pred --CCH--------HHHHHHHHHHHHCCc--CEEEEcC-C-CCC---CcHHHHHHHH----HHHHHhCCCceEEEEeCCCC
Q 018252 274 --IPP--------SKVAYVAKELHDMGC--FEISLGD-T-IGV---GTPGTVVPML----EAVMAVVPVEKLAVHLHDTY 332 (359)
Q Consensus 274 --~~~--------e~l~~~a~~l~~~Ga--d~I~L~D-T-~G~---~~P~~v~~lv----~~l~~~~p~~~L~~H~HNd~ 332 (359)
.+. ++..++++.+.+.|+ +.|.+.- + .|. .....+.+++ +++|+..|+.+|-+|..+-.
T Consensus 128 ~~~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~ 207 (399)
T 1ur4_A 128 ANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPE 207 (399)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTT
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCc
Confidence 122 244456667777775 4554433 2 122 2245555554 67777889888888887654
Q ss_pred Cc
Q 018252 333 GQ 334 (359)
Q Consensus 333 GL 334 (359)
..
T Consensus 208 ~~ 209 (399)
T 1ur4_A 208 TS 209 (399)
T ss_dssp ST
T ss_pred ch
Confidence 43
No 286
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=87.35 E-value=2.1 Score=39.68 Aligned_cols=131 Identities=18% Similarity=0.207 Sum_probs=83.3
Q ss_pred HHHHHcCCCEEEEec-CCchHHHHhh-hcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHH
Q 018252 208 EAAIAAGAKEVAIFA-SASEAFSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 285 (359)
Q Consensus 208 e~a~~aGv~~V~i~~-s~S~~~~~~n-~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~ 285 (359)
..+-++|++-|.+.- +.+-.+-... ...|.++.+..++.+.+.+ .+.|.+.+. || ...++ .+.+++
T Consensus 34 ~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~---~~pviaD~~--~G----yg~~~---~~~~~~ 101 (255)
T 2qiw_A 34 GLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAV---SIPVSVDVE--SG----YGLSP---ADLIAQ 101 (255)
T ss_dssp HHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHC---SSCEEEECT--TC----TTCCH---HHHHHH
T ss_pred HHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcC---CCCEEeccC--CC----cCcHH---HHHHHH
Confidence 344457999887752 3332221111 1357888888877766554 366654443 33 22244 678888
Q ss_pred HHHCCcCEEEEcCCC-----CCCcHHHHHHHHHHHHHhCC--CceEEEEeCCC------------CCcHHHHHHHHHHcC
Q 018252 286 LHDMGCFEISLGDTI-----GVGTPGTVVPMLEAVMAVVP--VEKLAVHLHDT------------YGQSLPNILISLQVS 346 (359)
Q Consensus 286 l~~~Gad~I~L~DT~-----G~~~P~~v~~lv~~l~~~~p--~~~L~~H~HNd------------~GLAlANalaAv~AG 346 (359)
+.++|+..|.|-|.. .+..++++.+.|+++++... ++++-+=.|-| .--++.-+.+-.+||
T Consensus 102 l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAG 181 (255)
T 2qiw_A 102 ILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAG 181 (255)
T ss_dssp HHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHT
T ss_pred HHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcC
Confidence 889999999999986 23455778888888887622 23434444433 234677888999999
Q ss_pred CCEE
Q 018252 347 PMHA 350 (359)
Q Consensus 347 a~~I 350 (359)
|+.|
T Consensus 182 Ad~i 185 (255)
T 2qiw_A 182 ARSV 185 (255)
T ss_dssp CSEE
T ss_pred CcEE
Confidence 9976
No 287
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=87.34 E-value=8.9 Score=37.73 Aligned_cols=135 Identities=14% Similarity=0.125 Sum_probs=77.7
Q ss_pred HHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCChHhHHHHHH----cCCCEEEEecCCch---
Q 018252 154 IRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIA----AGAKEVAIFASASE--- 226 (359)
Q Consensus 154 a~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~~gie~a~~----aGv~~V~i~~s~S~--- 226 (359)
++.|.+.|++.+-||++- +.+..-+.+..+..+.+-+..=.-+.++++.|++ .|.+.|.+.-.+|.
T Consensus 127 vd~l~~~~vd~~KIgS~~-------~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPt 199 (385)
T 1vli_A 127 ADLLQSTSPSAFKIASYE-------INHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPA 199 (385)
T ss_dssp HHHHHTTCCSCEEECGGG-------TTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSC
T ss_pred HHHHHhcCCCEEEECccc-------ccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCC
Confidence 455667788888888742 3454433333333333333211126788887776 47766655322222
Q ss_pred HHHHhhhcCCHHHHHHHHHHHHHHHHh-C-CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEE--------E
Q 018252 227 AFSKSNINCSIEDSLVRYRAVAHAAKV-L-SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEIS--------L 296 (359)
Q Consensus 227 ~~~~~n~~~t~~e~l~~i~~~i~~Ak~-~-G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~--------L 296 (359)
.....|+ . ++...|+ . ++.| ++-++.. ++ ..++.++..+||+.|- +
T Consensus 200 p~~~~nL--~----------aI~~Lk~~f~~lpV-G~SdHt~-----G~------~~~~~AAvAlGA~iIEkHftldra~ 255 (385)
T 1vli_A 200 PPEYSNL--S----------VIPMLAAAFPEAVI-GFSDHSE-----HP------TEAPCAAVRLGAKLIEKHFTIDKNL 255 (385)
T ss_dssp CGGGCCT--T----------HHHHHHHHSTTSEE-EEEECCS-----SS------SHHHHHHHHTTCSEEEEEBCSCTTS
T ss_pred ChhhcCH--H----------HHHHHHHHcCCCCE-EeCCCCC-----Cc------hHHHHHHHHcCCCEEEeCCCccccC
Confidence 1222232 2 1222233 3 5666 4433322 22 4688888899999664 4
Q ss_pred --cCCCCCCcHHHHHHHHHHHHHhC
Q 018252 297 --GDTIGVGTPGTVVPMLEAVMAVV 319 (359)
Q Consensus 297 --~DT~G~~~P~~v~~lv~~l~~~~ 319 (359)
+|..=.++|.++.+|++.++...
T Consensus 256 ~G~D~~~SL~P~ef~~lv~~ir~i~ 280 (385)
T 1vli_A 256 PGADHSFALNPDELKEMVDGIRKTE 280 (385)
T ss_dssp SCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred CCCchhhhCCHHHHHHHHHHHHHHH
Confidence 78888999999999999998643
No 288
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=87.34 E-value=6.7 Score=37.16 Aligned_cols=103 Identities=13% Similarity=0.093 Sum_probs=56.8
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +. +.+..+++++.+
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~-----~Ls~eEr~~vi~~~~~~~~g-rvpViaGv---------g~-st~~ai~la~~A 102 (314)
T 3d0c_A 39 VEFLLQNGIEVIVPNGNTGEFY-----ALTIEEAKQVATRVTELVNG-RATVVAGI---------GY-SVDTAIELGKSA 102 (314)
T ss_dssp HHHHHHTTCSEECTTSGGGTGG-----GSCHHHHHHHHHHHHHHHTT-SSEEEEEE---------CS-SHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcccCChh-----hCCHHHHHHHHHHHHHHhCC-CCeEEecC---------Cc-CHHHHHHHHHHH
Confidence 4455566777766555555543 24556655555555555432 24443222 23 556677777777
Q ss_pred HHCCcCEEEEcCC-CCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLGDT-IGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~DT-~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+.=. .-..+++.+.+.++++.+..+ +||-+
T Consensus 103 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiil 142 (314)
T 3d0c_A 103 IDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALD-APSII 142 (314)
T ss_dssp HHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSS-SCEEE
T ss_pred HHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC-CCEEE
Confidence 7777776554322 223456667777777776654 34433
No 289
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=87.31 E-value=2 Score=38.69 Aligned_cols=169 Identities=14% Similarity=0.099 Sum_probs=81.2
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe--C--------Ch-------H----hHHH
Q 018252 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT--P--------NL-------K----GFEA 209 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~--~--------n~-------~----gie~ 209 (359)
.+.++.+.++|++.||+........ + -.+.+++.+.+++ .++++.+.. + +. + .++.
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~~~~-~-~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 96 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLGEFHNL-S-DAKKRELKAVADD-LGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDD 96 (290)
T ss_dssp HHHHHHHHHTTCSEEEEESTTGGGS-C-HHHHHHHHHHHHH-HTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecCCcccc-c-hhhHHHHHHHHHH-cCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4456667789999999986321000 0 0223344444432 345554432 1 11 1 2344
Q ss_pred HHHcCCCEEEEec----CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC--CCCHHHHHHHH
Q 018252 210 AIAAGAKEVAIFA----SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG--AIPPSKVAYVA 283 (359)
Q Consensus 210 a~~aGv~~V~i~~----s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~--r~~~e~l~~~a 283 (359)
|.+.|++.|.+.. ...............+...+.+.++.++|+++|+++. +. .-.++.+ -.+++.+.+++
T Consensus 97 a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lE--n~~~~~~~~~~~~~~~~~l~ 172 (290)
T 2qul_A 97 CHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYA--LE--VVNRFEQWLCNDAKEAIAFA 172 (290)
T ss_dssp HHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEE--EE--CCCTTTCSSCCSHHHHHHHH
T ss_pred HHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEE--EE--eCccccccccCCHHHHHHHH
Confidence 5557999887532 1100000000001134566777888889999998763 32 1111111 24778888877
Q ss_pred HHHHHCCcCEEE-EcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCC
Q 018252 284 KELHDMGCFEIS-LGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY 332 (359)
Q Consensus 284 ~~l~~~Gad~I~-L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~ 332 (359)
+.+- ...+. .-|+.=...-. .+....+++ +.+-...+|.||..
T Consensus 173 ~~~~---~~~~g~~~D~~h~~~~g--~d~~~~l~~-~~~~i~~vH~~D~~ 216 (290)
T 2qul_A 173 DAVD---SPACKVQLDTFHMNIEE--TSFRDAILA-CKGKMGHFHLGEAN 216 (290)
T ss_dssp HHHC---CTTEEEEEEHHHHHHHC--SCHHHHHHH-TTTTEEEEEECCTT
T ss_pred HHcC---CCCEEEEEEchhhhhcC--CCHHHHHHH-HHhheeEEEEccCC
Confidence 6553 22222 23542111100 012233333 33346789999863
No 290
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=87.30 E-value=3.1 Score=40.27 Aligned_cols=117 Identities=16% Similarity=0.073 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeec---C-----------------------C---------CCC--CCCHH--
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG---C-----------------------P---------VEG--AIPPS-- 277 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg---~-----------------------~---------~~~--r~~~e-- 277 (359)
.++.++.++++++.++++|-++...|.+. | . | ... ..+.+
T Consensus 75 ~d~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~eI 153 (363)
T 3l5l_A 75 SDAHAQAFVPVVQAIKAAGSVPGIQIAHA-GRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLDDI 153 (363)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEeccC-CccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCHHHH
Confidence 35667888899999999998887777642 1 0 0 000 02333
Q ss_pred -----HHHHHHHHHHHCCcCEEEEc-------------------CCCCCCc---HHHHHHHHHHHHHhCC-CceEEEEeC
Q 018252 278 -----KVAYVAKELHDMGCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVP-VEKLAVHLH 329 (359)
Q Consensus 278 -----~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p-~~~L~~H~H 329 (359)
.+.+.++.+.++|.|.|.|- |-.|... +..+.++++++++.++ +.+|++-..
T Consensus 154 ~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis 233 (363)
T 3l5l_A 154 ARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFG 233 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEec
Confidence 44555667778899977664 4444332 2346788899999885 445665433
Q ss_pred --C--CCC-cH----HHHHHHHHHcCCCEEecee
Q 018252 330 --D--TYG-QS----LPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 330 --N--d~G-LA----lANalaAv~AGa~~ID~tl 354 (359)
+ +-| .. +.-+...-++|+++|+++.
T Consensus 234 ~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 234 VLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp EECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred chhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 1 113 22 3334455678999999875
No 291
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=87.26 E-value=1.9 Score=41.08 Aligned_cols=81 Identities=11% Similarity=0.051 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhC-CCceEEEEe-CCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVV-PVEKLAVHL-HDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~-p~~~L~~H~-HNd~GLAlANalaAv~AG 346 (359)
+..|.+-+.++++.+.+.|++-|.++-|.|= ++.++-.++++.+.+.. +.+++-+|. +|+.--++..+..|-++|
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 119 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLG 119 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 5799999999999999999999999999996 46788888888888765 346666664 688888899999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.|=+
T Consensus 120 adavlv 125 (315)
T 3na8_A 120 AEAVMV 125 (315)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 987644
No 292
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=87.26 E-value=1.6 Score=42.69 Aligned_cols=68 Identities=16% Similarity=0.182 Sum_probs=55.5
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEE
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~I 350 (359)
..|.+..++-++++.++|||.|.++ +-+ .+-++-+..+++..+ +||..-.|-|+-+|+ +|+++|++-+
T Consensus 42 T~D~~atv~Qi~~l~~aG~diVRva----vp~-~~~a~al~~I~~~~~-vPlvaDiHf~~~lal----~a~e~G~dkl 109 (366)
T 3noy_A 42 THDVEATLNQIKRLYEAGCEIVRVA----VPH-KEDVEALEEIVKKSP-MPVIADIHFAPSYAF----LSMEKGVHGI 109 (366)
T ss_dssp TTCHHHHHHHHHHHHHTTCCEEEEE----CCS-HHHHHHHHHHHHHCS-SCEEEECCSCHHHHH----HHHHTTCSEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeC----CCC-hHHHHHHHHHHhcCC-CCEEEeCCCCHHHHH----HHHHhCCCeE
Confidence 3688899999999999999998883 223 345788888999887 799999999998877 4899999864
No 293
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=87.21 E-value=4.6 Score=40.01 Aligned_cols=57 Identities=9% Similarity=0.091 Sum_probs=30.5
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh-cCCCeEEEEeC--ChHhHHHHHHcCCCEEEE
Q 018252 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLPVLTP--NLKGFEAAIAAGAKEVAI 220 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~-~~~~~l~~l~~--n~~gie~a~~aGv~~V~i 220 (359)
..+++.|.+.|. .+++.+. .|+....+. .+..++...-+ ...+++.|++.|+..+.+
T Consensus 90 ~~v~~~l~~~G~-g~dvaS~------------~E~~~~~~~G~~~~~I~~~g~~k~~~ei~~a~~~gv~~~~v 149 (441)
T 3n2b_A 90 LGVLNTLARLGS-GFDIVSV------------GELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNV 149 (441)
T ss_dssp HHHHHHHHHTTC-EEEESSH------------HHHHHHHHTTCCGGGEEECCTTCCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCC-cEEEeCH------------HHHHHHHHcCCCcccEEEcCCCCCHHHHHHHHHCCCCEEEE
Confidence 677788888886 5555541 333333332 22233322223 346788888877654433
No 294
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=87.18 E-value=5.9 Score=37.07 Aligned_cols=101 Identities=16% Similarity=0.148 Sum_probs=61.5
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+. | |. .|. +..+.++.+++++.+
T Consensus 26 v~~li~~Gv~gl~~~GttGE~~-----~Ls~eEr~~v~~~~~~~~~--g--vi------aGv---g~~~t~~ai~la~~A 87 (293)
T 1w3i_A 26 AENLIRKGIDKLFVNGTTGLGP-----SLSPEEKLENLKAVYDVTN--K--II------FQV---GGLNLDDAIRLAKLS 87 (293)
T ss_dssp HHHHHHTTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHTTCS--C--EE------EEC---CCSCHHHHHHHHHHG
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHcC--C--EE------Eec---CCCCHHHHHHHHHHH
Confidence 5556677888888877776654 2455555544444443322 3 32 221 234667788888888
Q ss_pred HHCCcCEEEEcCC-CCC-CcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLGDT-IGV-GTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~DT-~G~-~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+.=. .-- .+++.+.+.++++.+..+ +||-+
T Consensus 88 ~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~-lPiil 128 (293)
T 1w3i_A 88 KDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSP-HPVYL 128 (293)
T ss_dssp GGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCS-SCEEE
T ss_pred HhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCC-CCEEE
Confidence 8888886555432 222 467888888888887764 44443
No 295
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=87.17 E-value=7.5 Score=37.65 Aligned_cols=125 Identities=14% Similarity=0.177 Sum_probs=72.4
Q ss_pred HHHHHHHHhCCCCEEEEeccC-CCCCcCCCCCHHHHHHHhhhcCCCeEEE-EeCChHhHHHHHHcCCCEEEEec-CCc--
Q 018252 151 VELIRRLVSSGLPVVEATSFV-SPKWVPQLADARDVMEAVRDLEGARLPV-LTPNLKGFEAAIAAGAKEVAIFA-SAS-- 225 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~fv-spk~vPq~~D~~ev~~~l~~~~~~~l~~-l~~n~~gie~a~~aGv~~V~i~~-s~S-- 225 (359)
.+.++.+.++|++.|++.... .+ ....+.++.+++.-+..+.+ -+.+.+.++.+.++|+|.|.+.. +.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~------~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~ 180 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHS------LNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSIC 180 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSB------HHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCc------HHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCC
Confidence 678889999999999986421 11 11122333333322555553 55677889999999999998832 111
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG 297 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~ 297 (359)
........+... +..+.++.+.++..+++|.+ +++-.+++.+.+. .++||+.|.+.
T Consensus 181 ~tr~~~g~g~p~---~~~i~~v~~~~~~~~iPVIA---------~GGI~~~~di~ka----la~GAd~V~vG 236 (361)
T 3khj_A 181 TTRIVAGVGVPQ---ITAIEKCSSVASKFGIPIIA---------DGGIRYSGDIGKA----LAVGASSVMIG 236 (361)
T ss_dssp CHHHHTCBCCCH---HHHHHHHHHHHHHHTCCEEE---------ESCCCSHHHHHHH----HHHTCSEEEES
T ss_pred CcccccCCCCCc---HHHHHHHHHHHhhcCCeEEE---------ECCCCCHHHHHHH----HHcCCCEEEEC
Confidence 111111122222 34455555556666787732 2345577664443 34699888765
No 296
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=87.14 E-value=2 Score=40.25 Aligned_cols=80 Identities=11% Similarity=-0.051 Sum_probs=66.3
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEE-EeCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAV-HLHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~-H~HNd~GLAlANalaAv~AG 346 (359)
+ .|.+.+.++++.+.+.|++-|.++-|.| .+++++-.++++.+.+... .+++-+ -++|+.--++..+..|-++|
T Consensus 18 g-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~G 96 (291)
T 3a5f_A 18 G-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIG 96 (291)
T ss_dssp S-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred C-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcC
Confidence 5 9999999999999999999999999988 4668888888888887653 355555 45678888889999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.+=.
T Consensus 97 adavlv 102 (291)
T 3a5f_A 97 VDGLLV 102 (291)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998744
No 297
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=87.02 E-value=2.3 Score=41.02 Aligned_cols=82 Identities=9% Similarity=-0.053 Sum_probs=68.3
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCC-CceEEEE-eCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVH-LHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~L~~H-~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.|= ++.++-.++++.+.+... .+++-++ ++|+.--++..+..|-++|
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 126 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAG 126 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 5799999999999999999999999999986 678888888888887653 4566554 4578888888999999999
Q ss_pred CCEEece
Q 018252 347 PMHAKPC 353 (359)
Q Consensus 347 a~~ID~t 353 (359)
|+.|=+.
T Consensus 127 adavlv~ 133 (343)
T 2v9d_A 127 ADGIVVI 133 (343)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9987443
No 298
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=86.98 E-value=3.3 Score=38.64 Aligned_cols=126 Identities=19% Similarity=0.118 Sum_probs=78.5
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
.+.|.+.|+..|-+. +.+.. .+.+..+..++++ +.+.|.|.+ ..+.+--+.-++.+
T Consensus 65 c~eA~~~~~aaVCV~----p~~V~---------------~a~~~L~gs~v~v----~tVigFP~G-~~~~~~Kv~Ea~~A 120 (260)
T 3r12_A 65 CLEARENRFHGVCVN----PCYVK---------------LAREELEGTDVKV----VTVVGFPLG-ANETRTKAHEAIFA 120 (260)
T ss_dssp HHHHHHTTCSEEEEC----GGGHH---------------HHHHHHTTSCCEE----EEEESTTTC-CSCHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEEC----HHHHH---------------HHHHHhcCCCCeE----EEEecCCCC-CCcHHHHHHHHHHH
Confidence 345566788877773 22211 2222333445554 334566754 55556556666778
Q ss_pred HHCCcCEEEEcCCCCCC---cHHHHHHHHHHHHHhCCCc----eEEEEeCCCCCcHHHHHHHHHHcCCCEEeceeeec
Q 018252 287 HDMGCFEISLGDTIGVG---TPGTVVPMLEAVMAVVPVE----KLAVHLHDTYGQSLPNILISLQVSPMHAKPCFTFA 357 (359)
Q Consensus 287 ~~~Gad~I~L~DT~G~~---~P~~v~~lv~~l~~~~p~~----~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl~~~ 357 (359)
.+.|||+|.+.=-+|.. .-..+.+-++++++..++. .|+--..++--. ..-+..|+++|||+|-++.-|.
T Consensus 121 i~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei-~~A~~ia~eaGADfVKTSTGf~ 197 (260)
T 3r12_A 121 VESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEK-IAACVISKLAGAHFVKTSTGFG 197 (260)
T ss_dssp HHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHH-HHHHHHHHHTTCSEEECCCSSS
T ss_pred HHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHH-HHHHHHHHHhCcCEEEcCCCCC
Confidence 88899999998888874 5567777788888765432 233333344333 3456778999999999997664
No 299
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=86.95 E-value=4.8 Score=37.88 Aligned_cols=104 Identities=17% Similarity=0.128 Sum_probs=59.1
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+. ..+.++.+++++.+
T Consensus 31 v~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---------~~~t~~ai~la~~a 95 (300)
T 3eb2_A 31 CDDLIQAGVHGLTPLGSTGEFA-----YLGTAQREAVVRATIEAAQR-RVPVVAGVA---------STSVADAVAQAKLY 95 (300)
T ss_dssp HHHHHHTTCSCBBTTSGGGTGG-----GCCHHHHHHHHHHHHHHHTT-SSCBEEEEE---------ESSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccCcc-----ccCHHHHHHHHHHHHHHhCC-CCcEEEeCC---------CCCHHHHHHHHHHH
Confidence 4455567777766655555543 34556666555555555542 244433222 23556777777777
Q ss_pred HHCCcCEEEE-cCCCCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+ +=..-..+++.+.+.++++.+..+ +||-+
T Consensus 96 ~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~-lPiil 135 (300)
T 3eb2_A 96 EKLGADGILAILEAYFPLKDAQIESYFRAIADAVE-IPVVI 135 (300)
T ss_dssp HHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCS-SCEEE
T ss_pred HHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCC-CCEEE
Confidence 7777775433 233333566777777777777665 34433
No 300
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=86.88 E-value=8.1 Score=36.24 Aligned_cols=104 Identities=15% Similarity=0.122 Sum_probs=62.7
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 27 v~~li~~Gv~gi~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~A 91 (297)
T 2rfg_A 27 VDWQIKHGAHGLVPVGTTGESP-----TLTEEEHKRVVALVAEQAQG-RVPVIAGA---------GSNNPVEAVRYAQHA 91 (297)
T ss_dssp HHHHHHTTCSEEECSSGGGTGG-----GSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccchh-----hCCHHHHHHHHHHHHHHhCC-CCeEEEcc---------CCCCHHHHHHHHHHH
Confidence 4556667888877766665653 34566666666666665543 24442222 234567777888888
Q ss_pred HHCCcCEEEEcC-CCCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 287 HDMGCFEISLGD-TIGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 287 ~~~Gad~I~L~D-T~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
.++|+|.+-+.= ..-..+++.+.+.++++.+..+ +||-+
T Consensus 92 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiil 131 (297)
T 2rfg_A 92 QQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAID-IPIIV 131 (297)
T ss_dssp HHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCS-SCEEE
T ss_pred HhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEE
Confidence 888888655542 2223466777777777777654 34443
No 301
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=86.81 E-value=1.9 Score=40.30 Aligned_cols=82 Identities=12% Similarity=0.015 Sum_probs=67.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCC-CceEEEE-eCCCCCcHHHHHHHHHHc
Q 018252 271 EGAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVH-LHDTYGQSLPNILISLQV 345 (359)
Q Consensus 271 ~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~L~~H-~HNd~GLAlANalaAv~A 345 (359)
.+..|.+.+.++++.+.+.|++-|.++-|.|= +++++-.++++.+.+... .+++-+| ++|+.--++..+..|-++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~ 94 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDV 94 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 35789999999999999999999999999885 668888888888887654 3565554 567888889999999999
Q ss_pred CCCEEec
Q 018252 346 SPMHAKP 352 (359)
Q Consensus 346 Ga~~ID~ 352 (359)
||+.+=.
T Consensus 95 Gadavlv 101 (289)
T 2yxg_A 95 GADAVLS 101 (289)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998744
No 302
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=86.80 E-value=1.6 Score=43.72 Aligned_cols=71 Identities=14% Similarity=0.064 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEecee
Q 018252 278 KVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl 354 (359)
...+.++.+.++|++.|.+.=+.| .|....+.++.+++.+|++++.+- .++...-+..+.++|++.|.++.
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~~pvi~g----~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPDLPVVAG----NVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTTSCEEEE----EECSHHHHHHHHHTTCSEEEECS
T ss_pred hHHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCCceEEeC----CcCCHHHHHHHHHcCCCEEEEcC
Confidence 345688889999999999843334 677888999999999987777663 24556677899999999998743
No 303
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=86.80 E-value=7.2 Score=37.09 Aligned_cols=155 Identities=10% Similarity=0.030 Sum_probs=92.4
Q ss_pred HHHHHHHhCCCCEEEEe-cc------CCCCCcCCCCCHHHHHHHhhhc----CCCeEEEEeCC----h----HhHHHHHH
Q 018252 152 ELIRRLVSSGLPVVEAT-SF------VSPKWVPQLADARDVMEAVRDL----EGARLPVLTPN----L----KGFEAAIA 212 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG-~f------vspk~vPq~~D~~ev~~~l~~~----~~~~l~~l~~n----~----~gie~a~~ 212 (359)
--++.+.++|++.|=++ .. -.|+.. .-..++++..++.+ +++-+.+=.+. . +-+++..+
T Consensus 29 ~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~--~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~ 106 (302)
T 3fa4_A 29 LSARVALSAGFDALYMTGAGTAASVHGQADLG--ICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSR 106 (302)
T ss_dssp HHHHHHHTTTCSCEEECHHHHHHHHHSCCSSS--CCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCC--cCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHHHHHH
Confidence 34567788999999884 21 123321 23456666665543 23333333332 1 22445567
Q ss_pred cCCCEEEEecCCchHHHHhhhc---CCHHHHHHHHHHHHHHHHhCCCcEEEEE-eeeecCCCCCCCCHHHHHHHHHHHHH
Q 018252 213 AGAKEVAIFASASEAFSKSNIN---CSIEDSLVRYRAVAHAAKVLSIPVRGYV-SCVVGCPVEGAIPPSKVAYVAKELHD 288 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~---~t~~e~l~~i~~~i~~Ak~~G~~V~~~i-s~~fg~~~~~r~~~e~l~~~a~~l~~ 288 (359)
+|+.-|++-..+.+-..-+.-| .+.++..++++.+.+.+++.|..+...- +.++. ....++.++-++...+
T Consensus 107 aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~-----~~gldeAi~Ra~ay~e 181 (302)
T 3fa4_A 107 SGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQ-----THGYEESVARLRAARD 181 (302)
T ss_dssp TTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHH-----HHCHHHHHHHHHHHHT
T ss_pred cCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccc-----cCCHHHHHHHHHHHHH
Confidence 8999999976654321111112 3689999999988888776665432111 11111 1246777888888899
Q ss_pred CCcCEEEEcCCCCCCcHHHHHHHHHHHH
Q 018252 289 MGCFEISLGDTIGVGTPGTVVPMLEAVM 316 (359)
Q Consensus 289 ~Gad~I~L~DT~G~~~P~~v~~lv~~l~ 316 (359)
+|||.|.+. |.-+++++.++++.+.
T Consensus 182 AGAD~ifi~---g~~~~~ei~~~~~~~~ 206 (302)
T 3fa4_A 182 AGADVGFLE---GITSREMARQVIQDLA 206 (302)
T ss_dssp TTCSEEEET---TCCCHHHHHHHHHHTT
T ss_pred cCCCEEeec---CCCCHHHHHHHHHHhc
Confidence 999999875 4568888888777664
No 304
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=86.78 E-value=20 Score=33.80 Aligned_cols=113 Identities=13% Similarity=0.021 Sum_probs=69.9
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
+.++.+++.|++.|.+.... . . ++++.+++.|+++...+ .+++ .++
T Consensus 93 ~~~~~~~~~g~d~V~l~~g~-----------p-~-------~~~~~l~~~g~~v~~~v-----------~s~~----~a~ 138 (326)
T 3bo9_A 93 DLVKVCIEEKVPVVTFGAGN-----------P-T-------KYIRELKENGTKVIPVV-----------ASDS----LAR 138 (326)
T ss_dssp HHHHHHHHTTCSEEEEESSC-----------C-H-------HHHHHHHHTTCEEEEEE-----------SSHH----HHH
T ss_pred HHHHHHHHCCCCEEEECCCC-----------c-H-------HHHHHHHHcCCcEEEEc-----------CCHH----HHH
Confidence 56788889999998874431 1 1 23455667788774322 2333 456
Q ss_pred HHHHCCcCEEEEcC--CCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEEeceeee
Q 018252 285 ELHDMGCFEISLGD--TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHAKPCFTF 356 (359)
Q Consensus 285 ~l~~~Gad~I~L~D--T~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~ID~tl~~ 356 (359)
.+.++|+|.|.+-. .-|..-+...-+++..+++.+. +++-.= =|.. -.|+.+++.+||+.|...-.|
T Consensus 139 ~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~-iPviaa----GGI~~~~dv~~al~~GA~gV~vGs~~ 208 (326)
T 3bo9_A 139 MVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVN-IPVIAA----GGIADGRGMAAAFALGAEAVQMGTRF 208 (326)
T ss_dssp HHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred HHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcC-CCEEEE----CCCCCHHHHHHHHHhCCCEEEechHH
Confidence 67789999988733 1222111123366677776653 455443 3665 678888899999999876444
No 305
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=86.78 E-value=1.9 Score=41.76 Aligned_cols=68 Identities=10% Similarity=-0.036 Sum_probs=50.0
Q ss_pred HHHHHHHHC--CcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEecee
Q 018252 281 YVAKELHDM--GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 281 ~~a~~l~~~--Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl 354 (359)
+.++.+.+. |++.|.+-=+.| .|..+.+.++.+++.+|++++.+.. .+...-+..|+++|||.|+++.
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g--~~~~~~~~i~~lr~~~~~~~vi~g~----v~t~e~A~~a~~aGaD~I~v~~ 190 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG--YSEHFVEFVKDVRKRFPQHTIMAGN----VVTGEMVEELILSGADIIKVGI 190 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT--TBHHHHHHHHHHHHHCTTSEEEEEE----ECSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHhccCCCCEEEEEecCC--CcHHHHHHHHHHHHhcCCCeEEEEe----CCCHHHHHHHHHhCCCEEEECC
Confidence 445556665 888776532334 5677889999999999777777653 4556788999999999998764
No 306
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=86.75 E-value=12 Score=38.65 Aligned_cols=192 Identities=12% Similarity=0.117 Sum_probs=113.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc--CCCeEEEEeCChHhH---HHHHHcCCCEE
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL--EGARLPVLTPNLKGF---EAAIAAGAKEV 218 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~--~~~~l~~l~~n~~gi---e~a~~aGv~~V 218 (359)
.++..++..| +...+.|++.|=+-| +.. -.|..++.+.+++. .++.+.+-+.+.+++ +..++. .|.|
T Consensus 170 ~ltekD~~di-~~~l~~g~d~v~~sf-V~~-----a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~-~DgI 241 (587)
T 2e28_A 170 GITEKDRADI-LFGIRQGIDFIAASF-VRR-----ASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEA-ADGL 241 (587)
T ss_dssp SCCHHHHHHH-HHHHHHTCSEEEESS-CCS-----HHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHH-SSEE
T ss_pred CCCcccHHHH-HHHHHcCCCEEEECC-CCC-----HHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHh-CCEE
Confidence 3555666555 667778999997765 321 24566666666643 357777777776554 444444 3655
Q ss_pred EEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE-c
Q 018252 219 AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL-G 297 (359)
Q Consensus 219 ~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L-~ 297 (359)
.+- -.|+-.. ...++.....+.+++.|+++|..|...=-+-=+--...+-+..++.+++.++.+ |+|.|.| +
T Consensus 242 mVa--rgDLgve----i~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~d-G~DavMLSg 314 (587)
T 2e28_A 242 MVA--RGDLGVE----IPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFD-GTDAVMLSG 314 (587)
T ss_dssp EEE--HHHHHHH----SCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHH-TCSEEEESH
T ss_pred EEc--Cchhhhh----cCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhh-Ccceeeecc
Confidence 552 1222111 123555566688999999999987431100000001124467788999998887 9999999 5
Q ss_pred CCCCCCcHHHHHHHHHHHHHhCCC-ceE--EEE--eCCC-----CCcHHHHHHHHHHcCCCEE
Q 018252 298 DTIGVGTPGTVVPMLEAVMAVVPV-EKL--AVH--LHDT-----YGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 298 DT~G~~~P~~v~~lv~~l~~~~p~-~~L--~~H--~HNd-----~GLAlANalaAv~AGa~~I 350 (359)
.|.---.|.+..+.+..+..+... ..- .++ .+.. -..|.|-..+|...+|..|
T Consensus 315 ETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~a~aI 377 (587)
T 2e28_A 315 ETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTITDAIGQSVAHTALNLDVAAI 377 (587)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCSEE
T ss_pred cccCCCCHHHHHHHHHHHHHHHhhhhhhhhHhhhhhcccccchHHHHHHHHHHHHHhCCCCEE
Confidence 677777898888887777654321 110 011 1111 1244555567777787754
No 307
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=86.74 E-value=8.6 Score=36.33 Aligned_cols=156 Identities=13% Similarity=0.082 Sum_probs=95.1
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCC---------cCCCCCHHHHHHHhhh--cCCCeEEEEeCChHhHHHHHHcCCCEEEE
Q 018252 152 ELIRRLVSSGLPVVEATSFVSPKW---------VPQLADARDVMEAVRD--LEGARLPVLTPNLKGFEAAIAAGAKEVAI 220 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG~fvspk~---------vPq~~D~~ev~~~l~~--~~~~~l~~l~~n~~gie~a~~aGv~~V~i 220 (359)
.+++.|.++|+.-+ +=++..--. ...|. .++..+.++. -.+..-.+++.|.++.+.+.++|+|.|.+
T Consensus 112 ~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~-~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~ 189 (286)
T 2p10_A 112 TFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMS-YAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILVC 189 (286)
T ss_dssp HHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCC-HHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCC-HHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEEE
Confidence 34499999999999 655310000 00011 1223344432 35666677888999999999999999888
Q ss_pred ecCCchH-HHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCC
Q 018252 221 FASASEA-FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299 (359)
Q Consensus 221 ~~s~S~~-~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT 299 (359)
..+.... ..-.....+.+++.+.+.++++.+++..-++. -++ -+. +-.+|+++.++.+.. .|++-+..+=+
T Consensus 190 h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvi-vLc--~gG---pIstpeDv~~~l~~t--~G~~G~~gASs 261 (286)
T 2p10_A 190 HMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDII-ILS--HGG---PIANPEDARFILDSC--QGCHGFYGASS 261 (286)
T ss_dssp ECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCE-EEE--EST---TCCSHHHHHHHHHHC--TTCCEEEESHH
T ss_pred CCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcE-EEe--cCC---CCCCHHHHHHHHhcC--CCccEEEeehh
Confidence 7763321 11123345788888999999999998876652 122 221 346888877766431 27888888777
Q ss_pred CCCCcHHH-HHHHHHHHHH
Q 018252 300 IGVGTPGT-VVPMLEAVMA 317 (359)
Q Consensus 300 ~G~~~P~~-v~~lv~~l~~ 317 (359)
+--+.|++ +.++++.+|.
T Consensus 262 ier~p~e~ai~~~~~~fk~ 280 (286)
T 2p10_A 262 MERLPAEEAIRSQTLAFKA 280 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred hhcCCHHHHHHHHHHHHHh
Confidence 66665543 4455555554
No 308
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=86.72 E-value=2.3 Score=40.63 Aligned_cols=71 Identities=11% Similarity=0.103 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHH----HHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEE
Q 018252 278 KVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPML----EAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv----~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~I 350 (359)
.+.+.++...++|++.|.+.|+.|. +.|..+.+++ +.+.+.+...+ -+|+.-+.+. ..-.-.+.|++.+
T Consensus 191 ~~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~-iih~~g~~~~---~l~~~~~~g~d~i 266 (348)
T 4ay7_A 191 ASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSVT-VLHICGNVNP---ILSDMADCGFEGL 266 (348)
T ss_dssp HHHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEE-EEECCSCCHH---HHHHHHTSCCSEE
T ss_pred HHHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCCc-EEEecCCcHH---HHHHHHHhccccc
Confidence 4455666777899999999999875 8899988875 34444556544 3677643322 2223347899987
Q ss_pred ec
Q 018252 351 KP 352 (359)
Q Consensus 351 D~ 352 (359)
..
T Consensus 267 ~~ 268 (348)
T 4ay7_A 267 SV 268 (348)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 309
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=86.69 E-value=1.5 Score=41.25 Aligned_cols=81 Identities=6% Similarity=-0.054 Sum_probs=66.6
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEE-EeCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAV-HLHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~-H~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.| .+++++-.++++.+.+... .+++-+ -++|+.--++..+..|-++|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSG 96 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999998 4668888888888887653 355555 45677788888889999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.|=+
T Consensus 97 adavlv 102 (292)
T 2ojp_A 97 IVGCLT 102 (292)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998743
No 310
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=86.60 E-value=1.8 Score=39.36 Aligned_cols=62 Identities=13% Similarity=0.057 Sum_probs=48.8
Q ss_pred HHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 282 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
-++++.++|+|.|.| |+.....|..+.++++.+++. ++.+..-+|+ ...+..|.++|+++|=
T Consensus 93 ~i~~~~~~Gad~V~l-~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig 154 (232)
T 3igs_A 93 DVDALAQAGAAIIAV-DGTARQRPVAVEALLARIHHH--HLLTMADCSS-----VDDGLACQRLGADIIG 154 (232)
T ss_dssp HHHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--TCEEEEECCS-----HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEE-CccccCCHHHHHHHHHHHHHC--CCEEEEeCCC-----HHHHHHHHhCCCCEEE
Confidence 356678899998854 777777899999999999874 4566666664 5778899999999993
No 311
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=86.54 E-value=2.9 Score=38.29 Aligned_cols=70 Identities=10% Similarity=0.036 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
.+++...++++++.+.|++.|.+.-+ +|. -.+.++.+++.+|+..++.- +. +-..-+..|+++||+.|..
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~~-a~e~I~~l~~~~~~~~iGaG---TV-lt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFR----SDA-AVEAIRLLRQAQPEMLIGAG---TI-LNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT----STT-HHHHHHHHHHHCTTCEEEEE---CC-CSHHHHHHHHHHTCSEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC----CCC-HHHHHHHHHHhCCCCEEeEC---Cc-CCHHHHHHHHHcCCCEEEe
Confidence 47889999999999999998888544 343 35788889999998777654 32 4478899999999999864
No 312
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=86.53 E-value=5.6 Score=36.62 Aligned_cols=100 Identities=15% Similarity=0.161 Sum_probs=56.6
Q ss_pred HHHHHHHHHhCCCc-EEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCC--CCC-----------------
Q 018252 244 YRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI--GVG----------------- 303 (359)
Q Consensus 244 i~~~i~~Ak~~G~~-V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~--G~~----------------- 303 (359)
+.+..+.+|+.|-+ +..+|. .+..+.+...++++.+.+.|+|.|-|.=.. -.+
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~-------~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~ 76 (268)
T 1qop_A 4 YENLFAQLNDRREGAFVPFVT-------LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGV 76 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE-------TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCceEEEEee-------CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCC
Confidence 33444555555544 445553 123466889999999999999976652211 111
Q ss_pred cHHHHHHHHHHHHHhCCCceEEEEe-CCC-CCcHH-HHHHHHHHcCCCEE
Q 018252 304 TPGTVVPMLEAVMAVVPVEKLAVHL-HDT-YGQSL-PNILISLQVSPMHA 350 (359)
Q Consensus 304 ~P~~v~~lv~~l~~~~p~~~L~~H~-HNd-~GLAl-ANalaAv~AGa~~I 350 (359)
+...+.++++.+++.++.+|+.+=. -|. +-.++ .-+-.+.++|++.|
T Consensus 77 ~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgi 126 (268)
T 1qop_A 77 TPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSV 126 (268)
T ss_dssp CHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEE
Confidence 2234457889999885446654411 111 11111 23445788999854
No 313
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=86.47 E-value=2.3 Score=40.36 Aligned_cols=69 Identities=7% Similarity=-0.054 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCCC-CCcHHHHHHH--------HHHHHHhCCCceEEEEeCCCCCcHHHHHHHH-HHcCC
Q 018252 278 KVAYVAKELHDMGCFEISLGDTIG-VGTPGTVVPM--------LEAVMAVVPVEKLAVHLHDTYGQSLPNILIS-LQVSP 347 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT~G-~~~P~~v~~l--------v~~l~~~~p~~~L~~H~HNd~GLAlANalaA-v~AGa 347 (359)
.+.+.++...++|++.|.+.|+.| .+.|..+.++ ++.+++. |++++-.|+..+ .+.+.. .+.|+
T Consensus 180 ~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i~~~~g~-----~~~l~~l~~~g~ 253 (338)
T 2eja_A 180 TVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVIYFFRGS-----SSFIDLAVDYRA 253 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEEEEESSH-----HHHHHHHTTSCC
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEEEEcCCc-----HHHHHHHHHcCC
Confidence 344555666789999999999765 4678876655 4455544 567888888654 223333 46788
Q ss_pred CEEec
Q 018252 348 MHAKP 352 (359)
Q Consensus 348 ~~ID~ 352 (359)
+.+..
T Consensus 254 d~~~~ 258 (338)
T 2eja_A 254 DALSV 258 (338)
T ss_dssp SEEEC
T ss_pred CEEEe
Confidence 88754
No 314
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=86.45 E-value=16 Score=33.49 Aligned_cols=166 Identities=13% Similarity=0.046 Sum_probs=89.4
Q ss_pred HHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCChHhHHHHHHcCCCEEEEe-cC--CchHHH
Q 018252 153 LIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIF-AS--ASEAFS 229 (359)
Q Consensus 153 ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~~gie~a~~aGv~~V~i~-~s--~S~~~~ 229 (359)
.++.+.+.|.|.||+|.-..- ...+..++++.+++ .++.+..+.-|...+ ..|+|-+-+. +. .++.|.
T Consensus 28 ~l~~~~~~GtDaI~vGgs~gv----t~~~~~~~v~~ik~-~~~Piil~p~~~~~~----~~gaD~il~pslln~~~~~~i 98 (235)
T 3w01_A 28 DLDAICMSQTDAIMIGGTDDV----TEDNVIHLMSKIRR-YPLPLVLEISNIESV----MPGFDFYFVPTVLNSTDVAFH 98 (235)
T ss_dssp HHHHHHTSSCSEEEECCSSCC----CHHHHHHHHHHHTT-SCSCEEEECCCSTTC----CTTCSEEEEEEETTBSSGGGT
T ss_pred HHHHHHHcCCCEEEECCcCCc----CHHHHHHHHHHhcC-cCCCEEEecCCHHHh----hcCCCEEEEccccCCCCcchh
Confidence 445578999999999973211 01233445555555 444444444455333 4588876653 22 223331
Q ss_pred HhhhcCCHHHHHHHHHHHHHHHHhCCC-----cE--EEEEeeeecCCCCCCC---------CHHHHHHHHHHHHH-CCcC
Q 018252 230 KSNINCSIEDSLVRYRAVAHAAKVLSI-----PV--RGYVSCVVGCPVEGAI---------PPSKVAYVAKELHD-MGCF 292 (359)
Q Consensus 230 ~~n~~~t~~e~l~~i~~~i~~Ak~~G~-----~V--~~~is~~fg~~~~~r~---------~~e~l~~~a~~l~~-~Gad 292 (359)
. . .-++.++++|+ ++ .+||. + .|..+.. +++.+...+..+.+ +|-.
T Consensus 99 ~-------g-------~~~~a~~~~gl~~~~~e~i~~gYiv--v-~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~ 161 (235)
T 3w01_A 99 N-------G-------TLLEALKTYGHSIDFEEVIFEGYVV--C-NADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLP 161 (235)
T ss_dssp T-------H-------HHHHHHHHHGGGCCGGGEEEEEEEE--C-CSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCS
T ss_pred h-------h-------HHHHHHHHcCCCCcccceeeeeEEE--E-CCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCC
Confidence 1 0 11223566787 54 45664 2 3332111 46677666663333 4777
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 293 EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 293 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
-||+.- .|.-- -.++++.+++..+++++.+=+ |....--.+.+..||+.|=+
T Consensus 162 ~vY~e~-sG~~g---~~~~v~~ir~~~~~~pv~vGf----GI~~~e~a~~~~~gAD~VVV 213 (235)
T 3w01_A 162 VMYIEY-SGIYG---DVSKVQAVSEHLTETQLFYGG----GISSEQQATEMAAIADTIIV 213 (235)
T ss_dssp EEEEEC-TTSCC---CHHHHHHHHTTCSSSEEEEES----CCCSHHHHHHHHTTSSEEEE
T ss_pred EEEEec-CCCcC---CHHHHHHHHHhcCCCCEEEEC----CcCCHHHHHHHHcCCCEEEE
Confidence 888855 67633 367888888877444554432 33333333444458887643
No 315
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=86.42 E-value=2.8 Score=37.95 Aligned_cols=70 Identities=6% Similarity=-0.048 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
.+++.+.++++++.+.|++.|-+-.. +| ...+.++.+++.+|++.++... . +-.-.+-.|+++||+.|+.
T Consensus 35 ~~~~~~~~~~~al~~gGv~~iel~~k----~~-~~~~~i~~l~~~~~~~~igagt---v-l~~d~~~~A~~aGAd~v~~ 104 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRTLEVTLR----SQ-HGLKAIQVLREQRPELCVGAGT---V-LDRSMFAAVEAAGAQFVVT 104 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEESS----ST-HHHHHHHHHHHHCTTSEEEEEC---C-CSHHHHHHHHHHTCSSEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecC----Cc-cHHHHHHHHHHhCcccEEeeCe---E-eeHHHHHHHHHCCCCEEEe
Confidence 47788899999999999998888754 33 3456788889999887766653 2 3447889999999999975
No 316
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=86.40 E-value=8.7 Score=35.11 Aligned_cols=172 Identities=12% Similarity=0.017 Sum_probs=83.9
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc--CCCeEEEEeCChHhHHHHHHcCCCEEEEe-cCCchH
Q 018252 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL--EGARLPVLTPNLKGFEAAIAAGAKEVAIF-ASASEA 227 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~--~~~~l~~l~~n~~gie~a~~aGv~~V~i~-~s~S~~ 227 (359)
.++++.|.++|.|.||+|.... ...+.+++.++++ .++.+..+.-+...+ ++|+|-+-+. ++.++.
T Consensus 23 ~~~~~~l~~~GaD~IelG~S~g-------~t~~~~~~~v~~ir~~~~Pivl~~y~~n~i----~~gvDg~iipdLp~ee~ 91 (234)
T 2f6u_A 23 DEIIKAVADSGTDAVMISGTQN-------VTYEKARTLIEKVSQYGLPIVVEPSDPSNV----VYDVDYLFVPTVLNSAD 91 (234)
T ss_dssp HHHHHHHHTTTCSEEEECCCTT-------CCHHHHHHHHHHHTTSCCCEEECCSSCCCC----CCCSSEEEEEEETTBSB
T ss_pred HHHHHHHHHcCCCEEEECCCCC-------CCHHHHHHHHHHhcCCCCCEEEecCCcchh----hcCCCEEEEcccCCCCC
Confidence 4457999999999999997211 1234444444433 344443333221223 6799976654 333332
Q ss_pred HHHhhhcCCHHHHHHHHHHHHHHHHhCC-----CcEE--EEEeeeecCCCC---------CCCCHHHHHHHHHHHHH-CC
Q 018252 228 FSKSNINCSIEDSLVRYRAVAHAAKVLS-----IPVR--GYVSCVVGCPVE---------GAIPPSKVAYVAKELHD-MG 290 (359)
Q Consensus 228 ~~~~n~~~t~~e~l~~i~~~i~~Ak~~G-----~~V~--~~is~~fg~~~~---------~r~~~e~l~~~a~~l~~-~G 290 (359)
-... . ....+.+..+.+.++++| +++. +|+.. .|.. ...+|+.+..+++...+ +|
T Consensus 92 ~~~~-~----g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~---~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~ 163 (234)
T 2f6u_A 92 GDWI-T----GKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVL---NPDSAVARVTKALCNIDKELAASYALVGEKLFN 163 (234)
T ss_dssp GGGT-T----HHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEEC---CTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHH-h----hhHHHHHHhhhhhHHHcCCcccceeeeecceEEE---CCCCceEEeecCCCCCCHHHHHHHHHhhhhhcC
Confidence 1110 0 011111111102225566 6543 44432 3332 11256555556555442 33
Q ss_pred cCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEE--EeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 291 CFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV--HLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 291 ad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~--H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
-.-|++.- .|.. ...++++.+++..+++++.+ -.++ ...+..+++ ||+.|=
T Consensus 164 ~~~Vyl~~-~G~~---~~~~~i~~i~~~~~~~Pv~vGgGI~s-----~e~a~~~~~-gAd~VI 216 (234)
T 2f6u_A 164 LPIIYIEY-SGTY---GNPELVAEVKKVLDKARLFYGGGIDS-----REKAREMLR-YADTII 216 (234)
T ss_dssp CSEEEEEC-TTSC---CCHHHHHHHHHHCSSSEEEEESCCCS-----HHHHHHHHH-HSSEEE
T ss_pred CCEEEEeC-CCCc---chHHHHHHHHHhCCCCCEEEEecCCC-----HHHHHHHHh-CCCEEE
Confidence 35666544 6752 35678888888763344444 3332 123333444 888764
No 317
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=86.38 E-value=3.3 Score=37.02 Aligned_cols=170 Identities=16% Similarity=0.057 Sum_probs=84.8
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC--Ch---------------HhHHHHHHc
Q 018252 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP--NL---------------KGFEAAIAA 213 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~--n~---------------~gie~a~~a 213 (359)
.+.++.+.++|++.||+..... ...+.-.+.+++.+.+++ .++++.++.. +. +.++.|.+.
T Consensus 19 ~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~l 96 (281)
T 3u0h_A 19 VLYLDLARETGYRYVDVPFHWL-EAEAERHGDAAVEAMFQR-RGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARL 96 (281)
T ss_dssp HHHHHHHHHTTCSEECCCHHHH-HHHHHHHCHHHHHHHHHT-TTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEecHHHH-HHHhcccCHHHHHHHHHH-cCCceEEecccccccCCCHHHHHHHHHHHHHHHHHHHc
Confidence 3456677789999999986311 000011244555555543 3444443321 11 123455567
Q ss_pred CCCEEEEec-CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeee---ecCCCCCCCCHHHHHHHHHHHHHC
Q 018252 214 GAKEVAIFA-SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV---VGCPVEGAIPPSKVAYVAKELHDM 289 (359)
Q Consensus 214 Gv~~V~i~~-s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~---fg~~~~~r~~~e~l~~~a~~l~~~ 289 (359)
|++.|.+.. +....... ...+...+.+.++.++|++.|+++...-..- +..+...-.+++.+.++++.+
T Consensus 97 G~~~v~~~~~p~~~~~~~----~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~~~l~~~v--- 169 (281)
T 3u0h_A 97 GARSVTAFLWPSMDEEPV----RYISQLARRIRQVAVELLPLGMRVGLEYVGPHHLRHRRYPFVQSLADLKTFWEAI--- 169 (281)
T ss_dssp TCCEEEEECCSEESSCHH----HHHHHHHHHHHHHHHHHGGGTCEEEEECCCCGGGCCSSEECCCSHHHHHHHHHHH---
T ss_pred CCCEEEEeecCCCCCcch----hhHHHHHHHHHHHHHHHHHcCCEEEEEeccccccccccccccCCHHHHHHHHHHc---
Confidence 999887542 21111000 1235667888899999999998763221100 000111134777777777665
Q ss_pred CcCEEEE-cCCCCCCc-HHHHHHHHHHHHHhCCCceEEEEeCCCCC
Q 018252 290 GCFEISL-GDTIGVGT-PGTVVPMLEAVMAVVPVEKLAVHLHDTYG 333 (359)
Q Consensus 290 Gad~I~L-~DT~G~~~-P~~v~~lv~~l~~~~p~~~L~~H~HNd~G 333 (359)
+...+.+ -||.=... .....+ +.+.+.+....+|.+|..+
T Consensus 170 ~~~~vg~~~D~~h~~~~g~~~~~----~~~~~~~~i~~vHl~D~~~ 211 (281)
T 3u0h_A 170 GAPNVGALVDSYHWYTAGEHEDD----LAQLPPEKVVYVHINDTRD 211 (281)
T ss_dssp CCTTEEEEEEHHHHHHTTCCHHH----HHTSCGGGEEEEEECBCSS
T ss_pred CCCCeeEEeehhHHHHcCCCHHH----HHhcCcccEEEEEecCCCC
Confidence 3332222 24321110 011122 2333444567899998665
No 318
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=86.35 E-value=2.6 Score=39.56 Aligned_cols=82 Identities=9% Similarity=-0.012 Sum_probs=68.3
Q ss_pred CCCCHHHHHHHHHHHHH-CCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCC-CceEEE-EeCCCCCcHHHHHHHHHHc
Q 018252 272 GAIPPSKVAYVAKELHD-MGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAV-HLHDTYGQSLPNILISLQV 345 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~-~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~L~~-H~HNd~GLAlANalaAv~A 345 (359)
+..|.+.+.++++.+.+ .|++-|.++-|.|= +++++-.++++.+.+... .+++-+ -++|+.--++..+..|-++
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATEL 98 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhc
Confidence 57999999999999999 99999999999986 678888888988887653 355555 4667888888899999999
Q ss_pred CCCEEece
Q 018252 346 SPMHAKPC 353 (359)
Q Consensus 346 Ga~~ID~t 353 (359)
||+.+=+.
T Consensus 99 Gadavlv~ 106 (293)
T 1f6k_A 99 GYDCLSAV 106 (293)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEC
Confidence 99987543
No 319
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=86.28 E-value=4 Score=40.47 Aligned_cols=138 Identities=12% Similarity=-0.050 Sum_probs=79.0
Q ss_pred HHHHHcCCCEEEEecCC--------chHHHH--hhhcCCH-HHHHHHHHHHHHHHHhC-------CCcEEEEEeeeecCC
Q 018252 208 EAAIAAGAKEVAIFASA--------SEAFSK--SNINCSI-EDSLVRYRAVAHAAKVL-------SIPVRGYVSCVVGCP 269 (359)
Q Consensus 208 e~a~~aGv~~V~i~~s~--------S~~~~~--~n~~~t~-~e~l~~i~~~i~~Ak~~-------G~~V~~~is~~fg~~ 269 (359)
++|.++|.|.|.|...- |+..++ ..+|-+. ++-.+-+.++++..++. .+.|.+-|+..-.
T Consensus 177 ~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~-- 254 (419)
T 3l5a_A 177 LRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEET-- 254 (419)
T ss_dssp HHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEE--
T ss_pred HHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccc--
Confidence 45677899998886542 333222 2345565 55555556666655543 3345445542110
Q ss_pred CCC--CCCHHHHHHHHHHHHH-CCcCEEEEcCCCC----CC----cHHHHHHHHHHHHHhCC-CceEEEEeCCCCCcHHH
Q 018252 270 VEG--AIPPSKVAYVAKELHD-MGCFEISLGDTIG----VG----TPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLP 337 (359)
Q Consensus 270 ~~~--r~~~e~l~~~a~~l~~-~Gad~I~L~DT~G----~~----~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~GLAlA 337 (359)
..+ -.+.++..++++.+.+ +|+|-|.+..... .. .+..-.++++.+++.++ .++|..=+-- ....
T Consensus 255 ~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI---~t~e 331 (419)
T 3l5a_A 255 RGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGI---NSPE 331 (419)
T ss_dssp ETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSC---CSHH
T ss_pred cCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCC---CCHH
Confidence 111 2467899999999999 9999988876432 11 11112346677777764 3555442210 1346
Q ss_pred HHHHHHHcCCCEEe
Q 018252 338 NILISLQVSPMHAK 351 (359)
Q Consensus 338 NalaAv~AGa~~ID 351 (359)
.+..+++. ||.|-
T Consensus 332 ~Ae~~L~~-aDlVa 344 (419)
T 3l5a_A 332 SALDALQH-ADMVG 344 (419)
T ss_dssp HHHHHGGG-CSEEE
T ss_pred HHHHHHHh-CCcHH
Confidence 67777877 77664
No 320
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=86.26 E-value=7.6 Score=35.01 Aligned_cols=113 Identities=13% Similarity=0.081 Sum_probs=54.2
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee-cCC--------------
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV-GCP-------------- 269 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~f-g~~-------------- 269 (359)
+-++.+.++|.+.|.+....... .+ + +.+.++.+.++++|+++... ...| +.+
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~-------~~-~---~~~~~~~~~l~~~gl~~~~~-~~~~~g~~~~~~~~~~~~~~~~ 92 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPHT-------RT-R---EHAQAFRAKCDAAGIQVTVI-FGGFDGESYADIPTTARTVGLV 92 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGGG-------CS-H---HHHHHHHHHHHHTTCEEEEE-ECCCTTCCCSSHHHHHHHSSSC
T ss_pred HHHHHHHHcCCCEEEecCCCCCc-------CC-H---HHHHHHHHHHHHcCCEEEEE-eeccCCcccccccccccccCCC
Confidence 45677777777777776532110 11 1 23445555666777776432 1111 110
Q ss_pred CCC--CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCC---cHHHHHHHHHHHHHh---C--CCceEEEEeCCC
Q 018252 270 VEG--AIPPSKVAYVAKELHDMGCFEISLGDTIGVG---TPGTVVPMLEAVMAV---V--PVEKLAVHLHDT 331 (359)
Q Consensus 270 ~~~--r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~---~P~~v~~lv~~l~~~---~--p~~~L~~H~HNd 331 (359)
+.. ....+.+.+.++.+.++|+..|.+. .|.. .......+++.+++. . -++.|.+|.|.+
T Consensus 93 ~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~--~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~ 162 (290)
T 3tva_A 93 PLETRASRVAEMKEISDFASWVGCPAIGLH--IGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQE 162 (290)
T ss_dssp STTTHHHHHHHHHHHHHHHHHHTCSEEEEC--CCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEc--CCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCCC
Confidence 100 0123456666666677777777663 1211 233333333333321 1 246777777753
No 321
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=86.20 E-value=3.3 Score=37.14 Aligned_cols=174 Identities=12% Similarity=0.066 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEE--EeCChHhHHHHHHcCCCEEEEecCCc
Q 018252 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPV--LTPNLKGFEAAIAAGAKEVAIFASAS 225 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~--l~~n~~gie~a~~aGv~~V~i~~s~S 225 (359)
.+-+++++.+.+.|++.|++.-...... ....+.+. .+.++ ..++.+.+ -+++..+++.++++|++.|.+-..
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~-i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~-- 104 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHVVDLSNAIE-NSGENLPV-LEKLS-EFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSK-- 104 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEEEEHHHHHH-CCCTTHHH-HHHGG-GGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHH--
T ss_pred cCHHHHHHHHHHcCCCEEEEeccccccc-CCchhHHH-HHHHH-hcCCcEEEECCCCCHHHHHHHHHCCCCEEEECch--
Confidence 3568899999999999999853111000 00123333 33333 23344433 335678999999999998877321
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeee-----ecCCC-CCCCCHHHHHHHHHHHHHCCcCEEEEcCC
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-----VGCPV-EGAIPPSKVAYVAKELHDMGCFEISLGDT 299 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~-----fg~~~-~~r~~~e~l~~~a~~l~~~Gad~I~L~DT 299 (359)
.. ++-..+.+. +..|-.+...+.+- .-.+. .+..+ ..++++.+.++|++.|.+-++
T Consensus 105 -~l-------------~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~---~~e~~~~~~~~G~~~i~~t~~ 166 (241)
T 1qo2_A 105 -VL-------------EDPSFLKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEID---PVSLLKRLKEYGLEEIVHTEI 166 (241)
T ss_dssp -HH-------------HCTTHHHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCC---HHHHHHHHHTTTCCEEEEEET
T ss_pred -Hh-------------hChHHHHHH-HHcCCcEEEEEEecCCEEEECCceecCCCC---HHHHHHHHHhCCCCEEEEEee
Confidence 11 100012222 44553333333320 00000 01123 346777788899999998764
Q ss_pred C--CCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHc-----C-CCEE
Q 018252 300 I--GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQV-----S-PMHA 350 (359)
Q Consensus 300 ~--G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~A-----G-a~~I 350 (359)
. |...... .++++.+++..+ +|+-.- -|.. ..++....++ | |+-|
T Consensus 167 ~~~g~~~g~~-~~~i~~l~~~~~-iPvia~----GGI~~~~d~~~~~~~~~~~~G~adgv 220 (241)
T 1qo2_A 167 EKDGTLQEHD-FSLTKKIAIEAE-VKVLAA----GGISSENSLKTAQKVHTETNGLLKGV 220 (241)
T ss_dssp THHHHTCCCC-HHHHHHHHHHHT-CEEEEE----SSCCSHHHHHHHHHHHHHTTTSEEEE
T ss_pred cccccCCcCC-HHHHHHHHHhcC-CcEEEE----CCCCCHHHHHHHHhcccccCCeEeEE
Confidence 2 2211111 455566666543 344432 3555 3677777777 8 7644
No 322
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=86.16 E-value=2.3 Score=40.16 Aligned_cols=71 Identities=17% Similarity=0.146 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCC-----------CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHH
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILIS 342 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaA 342 (359)
.+++.+.+.++++.+.|++.|.+.-+-| ..+++++.++++..++. ++++.+|+|.+. ....+
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~~-----~i~~~ 236 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA--GIKVAAHAHGAS-----GIREA 236 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT--TCEEEEEECSHH-----HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEeCCHH-----HHHHH
Confidence 4678888899999999999888765433 46788888888877764 468999998764 35677
Q ss_pred HHcCCCEEe
Q 018252 343 LQVSPMHAK 351 (359)
Q Consensus 343 v~AGa~~ID 351 (359)
+++|++.|.
T Consensus 237 ~~~g~~~i~ 245 (403)
T 3gnh_A 237 VRAGVDTIE 245 (403)
T ss_dssp HHTTCSEEE
T ss_pred HHhCCCEEe
Confidence 889988764
No 323
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=86.05 E-value=15 Score=32.93 Aligned_cols=18 Identities=17% Similarity=0.082 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHCCcCEEE
Q 018252 278 KVAYVAKELHDMGCFEIS 295 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~ 295 (359)
++.+.++.+.++|+..|.
T Consensus 89 ~~~~~i~~a~~lG~~~v~ 106 (294)
T 3vni_A 89 FYTDLLKRLYKLDVHLIG 106 (294)
T ss_dssp HHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhCCCeee
Confidence 455556666667777665
No 324
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=86.03 E-value=12 Score=35.47 Aligned_cols=113 Identities=12% Similarity=0.115 Sum_probs=75.5
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-|-+.-++.|.+ -.|.+|-.+-++.+++.+.. .++|.+.+ +. +.++.+++++.+
T Consensus 39 v~~li~~Gv~Gl~v~GtTGE~~-----~Ls~eEr~~v~~~~v~~~~g-rvpViaGv---------g~-~t~~ai~la~~A 102 (316)
T 3e96_A 39 VDRIVDNGIDVIVPCGNTSEFY-----ALSLEEAKEEVRRTVEYVHG-RALVVAGI---------GY-ATSTAIELGNAA 102 (316)
T ss_dssp HHHHHTTTCCEECTTSGGGTGG-----GSCHHHHHHHHHHHHHHHTT-SSEEEEEE---------CS-SHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCccccCcc-----cCCHHHHHHHHHHHHHHhCC-CCcEEEEe---------Cc-CHHHHHHHHHHH
Confidence 4556678999888777766654 34677777767777776643 24553222 22 678889999999
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEE-EeCCCCCcHH
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSL 336 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~-H~HNd~GLAl 336 (359)
.++|+|.+-+. =-.-..+++.+.+.++++.+..+ +||-+ +...++...+
T Consensus 103 ~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~g~~l~~~~ 153 (316)
T 3e96_A 103 KAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALD-FPSLVYFKDPEISDRV 153 (316)
T ss_dssp HHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHT-SCEEEEECCTTSCTHH
T ss_pred HhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeCCCCCCHHH
Confidence 99999987664 23334578899999999988875 45444 4444444443
No 325
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=86.01 E-value=18 Score=32.22 Aligned_cols=154 Identities=11% Similarity=-0.059 Sum_probs=84.3
Q ss_pred HHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe------C--Ch-----HhHHHHHHcCCCE
Q 018252 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT------P--NL-----KGFEAAIAAGAKE 217 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~------~--n~-----~gie~a~~aGv~~ 217 (359)
.+.++.+.++|++.||+...... |.- +.+++.+.+++ .++++.... + .. +.++.|.+.|++.
T Consensus 26 ~~~l~~a~~~G~~~vEl~~~~~~---~~~-~~~~~~~~l~~-~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~ 100 (264)
T 1yx1_A 26 ASFLPLLAMAGAQRVELREELFA---GPP-DTEALTAAIQL-QGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGW 100 (264)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGCS---SCC-CHHHHHHHHHH-TTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEEHHhcC---CCH-HHHHHHHHHHH-cCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCCE
Confidence 35677788999999999753111 111 56666666654 234443321 1 11 3466777789999
Q ss_pred EEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc
Q 018252 218 VAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG 297 (359)
Q Consensus 218 V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~ 297 (359)
|.+....... . ..+..+.+.|++.|+++ .+.... ...-.+++.+.++++.+.+.+...=.+-
T Consensus 101 v~~~~g~~~~-------~------~~l~~l~~~a~~~Gv~l--~lEn~~---~~~~~~~~~~~~ll~~v~~~~~~vg~~~ 162 (264)
T 1yx1_A 101 LKVSLGLLPE-------Q------PDLAALGRRLARHGLQL--LVENDQ---TPQGGRIEVLERFFRLAERQQLDLAMTF 162 (264)
T ss_dssp EEEEEECCCS-------S------CCHHHHHHHHTTSSCEE--EEECCS---SHHHHCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEecCCCCc-------H------HHHHHHHHHHHhcCCEE--EEecCC---CCCCCCHHHHHHHHHHHHhcCCCeEEEE
Confidence 8886432110 0 04567778888889865 332110 0001356777888887766555522335
Q ss_pred CCCCCC-cHHHHHHHHHHHHHhCCCceEEEEeCCC
Q 018252 298 DTIGVG-TPGTVVPMLEAVMAVVPVEKLAVHLHDT 331 (359)
Q Consensus 298 DT~G~~-~P~~v~~lv~~l~~~~p~~~L~~H~HNd 331 (359)
||.-.. ......+.++.+. + -...+|.+|.
T Consensus 163 D~g~~~~~~~d~~~~~~~~~---~-~i~~vHlkD~ 193 (264)
T 1yx1_A 163 DIGNWRWQEQAADEAALRLG---R-YVGYVHCKAV 193 (264)
T ss_dssp ETTGGGGGTCCHHHHHHHHG---G-GEEEEEECEE
T ss_pred ehhhhhhcCCCHHHHHHHhh---h-hEEEEEeecc
Confidence 883222 1233334444333 3 3567888763
No 326
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=85.78 E-value=15 Score=34.73 Aligned_cols=186 Identities=15% Similarity=0.071 Sum_probs=101.0
Q ss_pred HHHHHhCCCCEEEEecc-CC--CCCcCC--CCCHHHHHHHhhhc---CCCeEEEEeC----Ch----HhHHHHHHcCCCE
Q 018252 154 IRRLVSSGLPVVEATSF-VS--PKWVPQ--LADARDVMEAVRDL---EGARLPVLTP----NL----KGFEAAIAAGAKE 217 (359)
Q Consensus 154 a~~L~~aGv~~IEvG~f-vs--pk~vPq--~~D~~ev~~~l~~~---~~~~l~~l~~----n~----~gie~a~~aGv~~ 217 (359)
++.+.++|++.|=+|.+ ++ ..-.|. .-..+++...++.+ .+..+.+=.+ +. +-+++..++|+.-
T Consensus 35 A~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaag 114 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIKAGVGA 114 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHHhCCeE
Confidence 44567889999999852 11 111222 13456666666532 2332332223 21 2345556789999
Q ss_pred EEEecCCchHHHHhhhc---CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEE
Q 018252 218 VAIFASASEAFSKSNIN---CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEI 294 (359)
Q Consensus 218 V~i~~s~S~~~~~~n~~---~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I 294 (359)
|++-....+-..-+.-| .+.++..++++.+++.++.-++.+.+-.- ++. ....+..++-++...++|||.|
T Consensus 115 v~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTD-a~~-----~~gldeai~Ra~ay~~AGAD~i 188 (298)
T 3eoo_A 115 VHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTD-AAA-----AEGIDAAIERAIAYVEAGADMI 188 (298)
T ss_dssp EEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEEC-THH-----HHHHHHHHHHHHHHHHTTCSEE
T ss_pred EEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeeh-hhh-----hcCHHHHHHHHHhhHhcCCCEE
Confidence 99976654211111111 36788898888777655433343322111 111 1134566677777889999999
Q ss_pred EEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 295 SLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 295 ~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
.+. |.-+++++.++.+.+. .|- .+-.-..+.. ..-+.-.--++|+++|-..
T Consensus 189 f~~---~~~~~ee~~~~~~~~~--~Pl-~~n~~~~g~t--p~~~~~eL~~lGv~~v~~~ 239 (298)
T 3eoo_A 189 FPE---AMKTLDDYRRFKEAVK--VPI-LANLTEFGST--PLFTLDELKGANVDIALYC 239 (298)
T ss_dssp EEC---CCCSHHHHHHHHHHHC--SCB-EEECCTTSSS--CCCCHHHHHHTTCCEEEEC
T ss_pred EeC---CCCCHHHHHHHHHHcC--CCe-EEEeccCCCC--CCCCHHHHHHcCCeEEEEc
Confidence 875 3457888888888774 342 1111111111 1123455667788887543
No 327
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=85.72 E-value=4.7 Score=40.44 Aligned_cols=169 Identities=14% Similarity=0.168 Sum_probs=99.7
Q ss_pred CCHHHHHHHHHH-----HHhCC----CCEEEEeccCCCCCcCCCCCHHHHHHHhh---hcCCCeEEEEeCChHhHHHHHH
Q 018252 145 VPTGVKVELIRR-----LVSSG----LPVVEATSFVSPKWVPQLADARDVMEAVR---DLEGARLPVLTPNLKGFEAAIA 212 (359)
Q Consensus 145 ~~~~~k~~ia~~-----L~~aG----v~~IEvG~fvspk~vPq~~D~~ev~~~l~---~~~~~~l~~l~~n~~gie~a~~ 212 (359)
++.+.-.+.++. ..+.| ++.|-+++. + .|.+.+...++ +.-++.++.. .+.+-++.+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~~-~-------~dpe~~~~~Vk~V~e~~dvPlsID-~dp~vleaale 172 (445)
T 2h9a_A 102 LSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGS-S-------QDAATFAKAVATAREVTDLPFILI-GTPEQLAAALE 172 (445)
T ss_dssp SCHHHHHHHHHHHHTCEEEETTEEEECCEEEEECT-T-------CCHHHHHHHHHHHHHHCCSCEEEE-SCHHHHHHHHH
T ss_pred CChHhHHHHHHHhhhHHHHhhcccccCcEEEEeCC-C-------CCHHHHHHHHHHHHHhcCCCEEEE-CCHHHHHHHHH
Confidence 444555555554 34466 899999872 2 34555444444 4446667666 88889999999
Q ss_pred cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 213 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
.+.++=-+..+++.. ++.++...|+++|..+.+ .+ + +.+.+.++.+.+.++|++
T Consensus 173 ~~~d~~pLIns~t~e---------------n~~~~~~la~~y~~~vV~-----~~-~-----~l~~l~~lv~~a~~~Gi~ 226 (445)
T 2h9a_A 173 TEGANNPLLYAATAD---------------NYEQMVELAKKYNVPLTV-----SA-K-----GLDALAELVQKITALGYK 226 (445)
T ss_dssp HHGGGCCEEEEECTT---------------THHHHHHHHHHHTCCEEE-----EC-S-----SHHHHHHHHHHHHHTTCC
T ss_pred hcCCCCCEEEECCHH---------------HHHHHHHHHHHhCCeEEE-----Ec-C-----CHHHHHHHHHHHHHCCCC
Confidence 876511111222211 234667777888888743 22 1 678899999999999998
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHhC---CCc-----eEEEEeC-CCCCcHHHHHHHHHHcCCCEEe
Q 018252 293 EISLGDTIGVGTPGTVVPMLEAVMAVV---PVE-----KLAVHLH-DTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 293 ~I~L~DT~G~~~P~~v~~lv~~l~~~~---p~~-----~L~~H~H-Nd~GLAlANalaAv~AGa~~ID 351 (359)
.|. -|..... -....+-+..+|+.. ++. .|..-.. +.+ +-..-|..+++.||+++=
T Consensus 227 ~Ii-LDP~~~~-~~~sl~~~~~IR~~al~~~d~~lg~P~i~~vs~~d~~-~ea~lA~~~~~~GasIl~ 291 (445)
T 2h9a_A 227 NLI-LDPQPEN-ISEGLFYQTQIRRLAIKKLFRPFGYPTIAFALDENPY-QAVMEASVYIAKYAGIIV 291 (445)
T ss_dssp CEE-EECCCSS-HHHHHHHHHHHHHHHHHSCCGGGCSCBEEECCCSSHH-HHHHHHHHHHHTTCSEEE
T ss_pred cEE-EcCCchh-HHHHHHHHHHHHHhhhcCCCcccCCCeeecCCchhHH-HHHHHHHHHHHcCCeEEE
Confidence 777 4544322 333444555555541 221 1333322 333 555556666999999874
No 328
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=85.65 E-value=15 Score=32.41 Aligned_cols=124 Identities=11% Similarity=0.029 Sum_probs=67.5
Q ss_pred HHHHHHHhCCCCEEEEe-ccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe-------CCh-------H----hHHHHHH
Q 018252 152 ELIRRLVSSGLPVVEAT-SFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-------PNL-------K----GFEAAIA 212 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG-~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~-------~n~-------~----gie~a~~ 212 (359)
+.++.+.++|++.||+. ...... .+.-.+.+++.+.+++ .++++.++. ++. + .++.|.+
T Consensus 18 ~~l~~~~~~G~~~vEl~~~~~~~~-~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 95 (278)
T 1i60_A 18 LDLELCEKHGYDYIEIRTMDKLPE-YLKDHSLDDLAEYFQT-HHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKT 95 (278)
T ss_dssp HHHHHHHHTTCSEEEEETTTHHHH-HTTSSCHHHHHHHHHT-SSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEccHHHHHH-HhccCCHHHHHHHHHH-cCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45556678899999998 521100 0111455666555553 345544321 121 1 2344556
Q ss_pred cCCCEEEEecCCchHHHHhhhcCC----HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 213 AGAKEVAIFASASEAFSKSNINCS----IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t----~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
.|++.|.+....... +.+ .+...+.++.+.+.|+++|+++. +....... ..-.+++.+.++++.+
T Consensus 96 lG~~~v~~~~g~~~~------~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lEn~~~~~-~~~~~~~~~~~l~~~~ 164 (278)
T 1i60_A 96 LGVKYVVAVPLVTEQ------KIVKEEIKKSSVDVLTELSDIAEPYGVKIA--LEFVGHPQ-CTVNTFEQAYEIVNTV 164 (278)
T ss_dssp HTCCEEEEECCBCSS------CCCHHHHHHHHHHHHHHHHHHHGGGTCEEE--EECCCCTT-BSSCSHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCCC------CCCHHHHHHHHHHHHHHHHHHHHhcCCEEE--EEecCCcc-chhcCHHHHHHHHHHh
Confidence 799998875332110 112 34556777888888999998653 32111100 0134778877777765
No 329
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=85.63 E-value=2.4 Score=36.93 Aligned_cols=68 Identities=7% Similarity=0.014 Sum_probs=51.0
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCC-CceEEEEeCCCCCcHHHHHHHHHHcCCCEE
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~GLAlANalaAv~AGa~~I 350 (359)
.+++...++++.+.+.|++.|.+.=. +| ...+.++.+|+.+| +..|++....| ..-+..|+++|||+|
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~----~~-~~~~~i~~ir~~~~~~~~ig~~~v~~----~~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFT----VP-DADTVIKELSFLKEKGAIIGAGTVTS----VEQCRKAVESGAEFI 87 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHTHHHHHTTCEEEEESCCS----HHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC----Ch-hHHHHHHHHHHHCCCCcEEEecccCC----HHHHHHHHHcCCCEE
Confidence 58899999999999999998876422 33 33556888888876 56788755223 345788999999999
No 330
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=85.47 E-value=28 Score=33.81 Aligned_cols=134 Identities=12% Similarity=0.079 Sum_probs=74.6
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh-cCCCeEEEEe-C--ChHhHHHHHHcCCCEEEEecCCc
Q 018252 150 KVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLPVLT-P--NLKGFEAAIAAGAKEVAIFASAS 225 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~-~~~~~l~~l~-~--n~~gie~a~~aGv~~V~i~~s~S 225 (359)
-..+++.|.++|+ .+++.+. .|+....+. .+. ....+. + ...+++.+++.|+..+.+ .+
T Consensus 70 ~~~v~~~l~~~G~-g~~vas~------------~E~~~~~~~G~~~-~~i~~~g~~k~~~~i~~a~~~gv~~i~v-ds-- 132 (425)
T 2qgh_A 70 NLSILSLLAHLES-GADCVSI------------GEIQRALKAGIKP-YRIVFSGVGKSAFEIEQALKLNILFLNV-ES-- 132 (425)
T ss_dssp CHHHHHHHHHTTC-EEEESSH------------HHHHHHHHTTCCG-GGEEECCTTCCHHHHHHHHHTTCSEEEE-CS--
T ss_pred CHHHHHHHHHcCC-eEEEeCH------------HHHHHHHHcCCCh-hHEEEcCCCCCHHHHHHHHHCCCCEEEe-CC--
Confidence 4578888889997 7777541 344343333 222 233443 3 347899999988765544 11
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeec-----------CCCCCC--CCHHHHHHHHHHHHHC-Cc
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG-----------CPVEGA--IPPSKVAYVAKELHDM-GC 291 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg-----------~~~~~r--~~~e~l~~~a~~l~~~-Ga 291 (359)
++.++.+.+.|++.|..+.+.|-..-+ +...+| .+++.+.++++.+.+. +.
T Consensus 133 ---------------~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~~~~~~~~l 197 (425)
T 2qgh_A 133 ---------------FMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFL 197 (425)
T ss_dssp ---------------HHHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHHHCSSE
T ss_pred ---------------HHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHHhCCCc
Confidence 222333444555556554443432111 001234 5788888888888887 66
Q ss_pred CEEEEcCCCCCC--cHHHHHHHHHHH
Q 018252 292 FEISLGDTIGVG--TPGTVVPMLEAV 315 (359)
Q Consensus 292 d~I~L~DT~G~~--~P~~v~~lv~~l 315 (359)
+...|-=.+|.. .|..+.+.++.+
T Consensus 198 ~l~Gl~~H~gs~~~~~~~~~~~~~~~ 223 (425)
T 2qgh_A 198 EPVSVHFHIGSQLLDLEPIIEASQKV 223 (425)
T ss_dssp EEEEEECCCBSSBCCHHHHHHHHHHH
T ss_pred cEEEEEEECCCCCCCHHHHHHHHHHH
Confidence 666666666654 455554444333
No 331
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=85.45 E-value=2.7 Score=37.09 Aligned_cols=66 Identities=12% Similarity=0.107 Sum_probs=48.7
Q ss_pred HHHHHHHCCcCEEEEcCCCCCCcH-HHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 282 VAKELHDMGCFEISLGDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L~DT~G~~~P-~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
.++.+.++|++.|.+. +.-...| ..+.++++.+++.+|+.++.+-.|+ ...+..+.++|+++|-++
T Consensus 80 ~i~~~~~~Gad~v~l~-~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t-----~~e~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 80 EVDELIESQCEVIALD-ATLQQRPKETLDELVSYIRTHAPNVEIMADIAT-----VEEAKNAARLGFDYIGTT 146 (223)
T ss_dssp HHHHHHHHTCSEEEEE-CSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSS-----HHHHHHHHHTTCSEEECT
T ss_pred HHHHHHhCCCCEEEEe-eecccCcccCHHHHHHHHHHhCCCceEEecCCC-----HHHHHHHHHcCCCEEEeC
Confidence 3556778899988774 3223345 5778999999999888778776664 556778999999998643
No 332
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=85.42 E-value=24 Score=33.01 Aligned_cols=153 Identities=14% Similarity=0.069 Sum_probs=87.1
Q ss_pred CCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC--ChHhHHHHHHcC--CCEEEEecCCc--hHHHHhhhcC
Q 018252 162 LPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP--NLKGFEAAIAAG--AKEVAIFASAS--EAFSKSNINC 235 (359)
Q Consensus 162 v~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~--n~~gie~a~~aG--v~~V~i~~s~S--~~~~~~n~~~ 235 (359)
++.|-+.....|-..| +..++++.+++. +.++...+- ..+-++...++| ++.+.+.+... +.+.+.. +.
T Consensus 142 ~~~v~~sggGEPll~~---~l~~ll~~~~~~-g~~i~l~TNG~~~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~-~~ 216 (342)
T 2yx0_A 142 PTHAAISLSGEPMLYP---YMGDLVEEFHKR-GFTTFIVTNGTIPERLEEMIKEDKLPTQLYVSITAPDIETYNSVN-IP 216 (342)
T ss_dssp CCEEEECSSSCGGGST---THHHHHHHHHHT-TCEEEEEECSCCHHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHH-CB
T ss_pred CCEEEEcCCCcccchh---hHHHHHHHHHHC-CCcEEEEcCCCcHHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHh-CC
Confidence 4667773222332111 455566666553 555544442 223477777777 88888877553 3443322 11
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc------CC------CCCC
Q 018252 236 SIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG------DT------IGVG 303 (359)
Q Consensus 236 t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~------DT------~G~~ 303 (359)
.....++.+.+.++.+++.|+.+.+.+. +. +.....+ +.++++.+.+.|++.|.+. .+ ....
T Consensus 217 ~~~~~~~~~~~~i~~l~~~g~~v~i~~~--l~-~g~n~~~---~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~ 290 (342)
T 2yx0_A 217 MIPDGWERILRFLELMRDLPTRTVVRLT--LV-KGENMHS---PEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMP 290 (342)
T ss_dssp SSSCHHHHHHHHHHHHTTCSSEEEEEEE--EC-TTTTCCC---HHHHHHHHHHHCCSEEEEEECC------CCCCGGGSC
T ss_pred CcccHHHHHHHHHHHHHhCCCCEEEEEE--EE-CCccHHH---HHHHHHHHHHcCCCEEEEEeeeecCCCcccccccCCC
Confidence 1123456667777888888987765554 32 2122223 5566666667888876641 11 2245
Q ss_pred cHHHHHHHHHHHHHhCCCceEE
Q 018252 304 TPGTVVPMLEAVMAVVPVEKLA 325 (359)
Q Consensus 304 ~P~~v~~lv~~l~~~~p~~~L~ 325 (359)
+++++.++.+.+++.+|+..|.
T Consensus 291 ~~e~~~~~~~~l~~~l~~~~I~ 312 (342)
T 2yx0_A 291 SHQDIREFAEALVKHLPGYHIE 312 (342)
T ss_dssp CHHHHHHHHHHHHTTCTTEEEE
T ss_pred CHHHHHHHHHHHHHhccCCcee
Confidence 6788999999999888765553
No 333
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=85.35 E-value=6.8 Score=35.37 Aligned_cols=167 Identities=13% Similarity=0.094 Sum_probs=83.5
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCcCCC--CCHHHHHHHhhhcCCCeEEE-EeC---------Ch-----------Hh
Q 018252 150 KVELIRRLVSSGLPVVEATSFVSPKWVPQL--ADARDVMEAVRDLEGARLPV-LTP---------NL-----------KG 206 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~fvspk~vPq~--~D~~ev~~~l~~~~~~~l~~-l~~---------n~-----------~g 206 (359)
-.+.++.+.++|++.||+.... +|.+ .+.+++.+.++ ..++++.+ ..+ +. +.
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~~~~~l~-~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 93 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASP----LPFYSDIQINELKACAH-GNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDL 93 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTT----GGGCCHHHHHHHHHHHH-HTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCcc----cCCcCHHHHHHHHHHHH-HcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 3456667788999999998531 1222 12334444333 24666665 322 11 12
Q ss_pred HHHHHHcCCCEEEEec-CCch-HHH-HhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC--CCCHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFA-SASE-AFS-KSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG--AIPPSKVAY 281 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~-s~S~-~~~-~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~--r~~~e~l~~ 281 (359)
++.|.+.|++.|.+.. +... .+. ........+...+.+.++.+.|++.|+++. +. .-.++.+ -.+++.+.+
T Consensus 94 i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE--n~~~~~~~~~~~~~~~~~ 169 (294)
T 3vni_A 94 LKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFC--LE--VLNRFENYLINTAQEGVD 169 (294)
T ss_dssp HHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEE--EE--CCCTTTCSSCCSHHHHHH
T ss_pred HHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE--EE--ecCcccCcccCCHHHHHH
Confidence 4455567999987532 2111 010 000001134566777888899999998753 32 1111111 247788887
Q ss_pred HHHHHHHCCcCEEEE-cCCCCCCcH-HHHHHHHHHHHHhCCCceEEEEeCCCC
Q 018252 282 VAKELHDMGCFEISL-GDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTY 332 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L-~DT~G~~~P-~~v~~lv~~l~~~~p~~~L~~H~HNd~ 332 (359)
+++.+- ...+.+ -||.=...- ....+.++.+ .+ -...+|.+|..
T Consensus 170 l~~~v~---~~~vg~~~D~~h~~~~g~d~~~~l~~~---~~-~i~~vHl~D~~ 215 (294)
T 3vni_A 170 FVKQVD---HNNVKVMLDTFHMNIEEDSIGGAIRTA---GS-YLGHLHTGECN 215 (294)
T ss_dssp HHHHHC---CTTEEEEEEHHHHHHHCSCHHHHHHHH---GG-GEEEEEECCTT
T ss_pred HHHHcC---CCCEEEEEEhhhhHHcCCCHHHHHHHh---hh-hEeEEEeCCCC
Confidence 777653 222222 343211110 1222333332 23 35778998853
No 334
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=85.35 E-value=19 Score=31.91 Aligned_cols=102 Identities=12% Similarity=-0.021 Sum_probs=66.4
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
+-++.+.++|.+.|.+...- . ....+. +.+.++.+.++++|+++.. +.. +. ....+.+.+.++
T Consensus 34 ~~l~~~~~~G~~~vEl~~~~----~--~~~~~~----~~~~~~~~~l~~~gl~i~~-~~~-~~-----~~~~~~~~~~i~ 96 (257)
T 3lmz_A 34 TTLKTLERLDIHYLCIKDFH----L--PLNSTD----EQIRAFHDKCAAHKVTGYA-VGP-IY-----MKSEEEIDRAFD 96 (257)
T ss_dssp HHHHHHHHTTCCEEEECTTT----S--CTTCCH----HHHHHHHHHHHHTTCEEEE-EEE-EE-----ECSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEeccc----C--CCCCCH----HHHHHHHHHHHHcCCeEEE-Eec-cc-----cCCHHHHHHHHH
Confidence 34777888999999987541 0 112222 2345666777889998742 221 11 146788999999
Q ss_pred HHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCC
Q 018252 285 ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHD 330 (359)
Q Consensus 285 ~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HN 330 (359)
.+.++|+..|.+. .| .+.+.++.+...+ . ++.|.+|.|+
T Consensus 97 ~A~~lGa~~v~~~--p~---~~~l~~l~~~a~~-~-gv~l~lEn~~ 135 (257)
T 3lmz_A 97 YAKRVGVKLIVGV--PN---YELLPYVDKKVKE-Y-DFHYAIHLHG 135 (257)
T ss_dssp HHHHHTCSEEEEE--EC---GGGHHHHHHHHHH-H-TCEEEEECCC
T ss_pred HHHHhCCCEEEec--CC---HHHHHHHHHHHHH-c-CCEEEEecCC
Confidence 9999999988873 12 3555555554443 3 4789999996
No 335
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=85.32 E-value=9.4 Score=34.41 Aligned_cols=111 Identities=9% Similarity=-0.006 Sum_probs=63.7
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCH-------H
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP-------S 277 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~-------e 277 (359)
+-++.+.++|.+.|.+..... . ..+.++.+.++++|+++.. +...+.... ...++ +
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~------------~---~~~~~~~~~l~~~gl~v~~-~~~~~~~~l-~~~d~~~r~~~~~ 104 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGL------------A---GRVNEIKQALNGRNIKVSA-ICAGFKGFI-LSTDPAIRKECMD 104 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTC------------G---GGHHHHHHHHTTSSCEECE-EECCCCSCT-TBSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCch------------H---HHHHHHHHHHHHcCCeEEE-EecCCCCcC-CCCCHHHHHHHHH
Confidence 346777889999999876511 0 1244566677889998732 111110000 11233 4
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCCCC------CcHHHHHHHHHHHHHh---C--CCceEEEEeCCCC
Q 018252 278 KVAYVAKELHDMGCFEISLGDTIGV------GTPGTVVPMLEAVMAV---V--PVEKLAVHLHDTY 332 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT~G~------~~P~~v~~lv~~l~~~---~--p~~~L~~H~HNd~ 332 (359)
.+.+.++.+.++|+..|.+.-..|. ..+.....+++.+++. . -++.|.+|.||.+
T Consensus 105 ~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~ 170 (287)
T 3kws_A 105 TMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRK 170 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 6677778888999998887533222 2334444444444321 1 2478999999743
No 336
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=85.29 E-value=0.65 Score=43.23 Aligned_cols=128 Identities=14% Similarity=-0.020 Sum_probs=84.4
Q ss_pred HhHHHHHH---cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCC-CCCCCCHHHHH
Q 018252 205 KGFEAAIA---AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP-VEGAIPPSKVA 280 (359)
Q Consensus 205 ~gie~a~~---aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~-~~~r~~~e~l~ 280 (359)
+.++..++ .=+|-+.+--.++-.+.+ +.+++.++.++++|+.|. +|.. .+--.....+.
T Consensus 26 ~~~~d~Le~~g~yID~lKfg~Gt~~l~~~-----------~~l~eki~l~~~~gV~v~------~GGTl~E~~~~qg~~~ 88 (251)
T 1qwg_A 26 KFVEDYLKVCGDYIDFVKFGWGTSAVIDR-----------DVVKEKINYYKDWGIKVY------PGGTLFEYAYSKGKFD 88 (251)
T ss_dssp HHHHHHHHHHGGGCSEEEECTTGGGGSCH-----------HHHHHHHHHHHTTTCEEE------ECHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhhhhcceEEecCceeeecCH-----------HHHHHHHHHHHHcCCeEE------CCcHHHHHHHHcCcHH
Confidence 44444444 236777776555544322 236788999999999872 3321 11001112566
Q ss_pred HHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHh-CCCceEEEEeC-------CCCCcHHHHHHHHHHcCCCEE
Q 018252 281 YVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAV-VPVEKLAVHLH-------DTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 281 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~-~p~~~L~~H~H-------Nd~GLAlANalaAv~AGa~~I 350 (359)
++.+.+.+.|.+.|-+.|..-.+.+.+-.++|+.+++. +. +.-++.-- -+...-+-.+...++|||+.|
T Consensus 89 ~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~-v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~V 165 (251)
T 1qwg_A 89 EFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFM-VLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYV 165 (251)
T ss_dssp HHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCE-EEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCE-EeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEE
Confidence 67778888999999999999999999999999999886 42 23333221 233444667888999999987
No 337
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=85.29 E-value=11 Score=34.89 Aligned_cols=57 Identities=21% Similarity=0.124 Sum_probs=43.2
Q ss_pred CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC--EEE--------EcCCCCCCcHHHHHHHHHHHHHh
Q 018252 255 SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF--EIS--------LGDTIGVGTPGTVVPMLEAVMAV 318 (359)
Q Consensus 255 G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad--~I~--------L~DT~G~~~P~~v~~lv~~l~~~ 318 (359)
|++|.++. +.+.-..+++..+++.+..+|++ .|. ++|..=.++|.++.++++.+++.
T Consensus 192 ~~pVi~d~-------sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 192 HLPIIVDP-------SHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEAL 258 (262)
T ss_dssp SSCEEECS-------STTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHHT
T ss_pred CCCEEEEc-------CCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHHH
Confidence 77764433 33333445677888889999999 554 67999999999999999999874
No 338
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=85.25 E-value=1.4 Score=41.62 Aligned_cols=81 Identities=6% Similarity=0.072 Sum_probs=68.4
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCC-CceEEEE-eCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVH-LHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p-~~~L~~H-~HNd~GLAlANalaAv~AG 346 (359)
+..|.+-+.++++.+.+.|++-|.++-|.|= ++.++-.++++.+.+... .+++-+| ++|+.--++..+..|-++|
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 99 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLG 99 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999999996 678888889988887653 3455554 5788889999999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.|=+
T Consensus 100 adavlv 105 (300)
T 3eb2_A 100 ADGILA 105 (300)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 988754
No 339
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=85.20 E-value=7.5 Score=36.27 Aligned_cols=62 Identities=18% Similarity=0.041 Sum_probs=43.6
Q ss_pred ChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEee
Q 018252 203 NLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSC 264 (359)
Q Consensus 203 n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~ 264 (359)
+.++++...+.|+..|++.+.-.......+.+.-.+..++.+.++++.|+++|+.|.+.+-.
T Consensus 30 ~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 30 TEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp CHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 45788888899999999976532211111112222567899999999999999999877754
No 340
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=85.19 E-value=23 Score=36.84 Aligned_cols=158 Identities=12% Similarity=0.135 Sum_probs=98.0
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc-CCCeEEEEeCChHhHH---HHHHcCCCEEE
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKGFE---AAIAAGAKEVA 219 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~-~~~~l~~l~~n~~gie---~a~~aGv~~V~ 219 (359)
.++..++..| +.-.+.|+|.|-+.| +.. -.|..++.+.+... .++.+.+-+.+.++++ ..+++ .|.|.
T Consensus 190 ~ltekD~~dl-~f~~~~~vD~Ia~SF-Vr~-----a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~-sDGIm 261 (606)
T 3t05_A 190 GITEKDAEDI-RFGIKENVDFIAASF-VRR-----PSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEV-SDGLM 261 (606)
T ss_dssp SSCHHHHHHH-HHHHHTTCSEEEETT-CCS-----HHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHH-CSCEE
T ss_pred CCChhHHHHH-HHHHHcCCCEEEECC-CCC-----HHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHh-CCEEE
Confidence 3556666665 566789999987665 331 24666666666543 4677777777776554 44444 45555
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCCCCCHHHHHHHHHHHHHCCcCEEEEc-
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-PVEGAIPPSKVAYVAKELHDMGCFEISLG- 297 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-~~~~r~~~e~l~~~a~~l~~~Gad~I~L~- 297 (359)
+- -.|+-. -...++.....+.+++.|+++|..|... ++..-. -...+-+..++.+++.++.+ |+|.|.|.
T Consensus 262 VA--RGDLgv----ei~~e~vp~~Qk~ii~~~~~~gkpvi~A-TQMLeSMi~~p~PTRAEvsDVanAv~d-GaDavMLSg 333 (606)
T 3t05_A 262 VA--RGDMGV----EIPPEKVPMVQKDLIRQCNKLGKPVITA-TQMLDSMQRNPRATRAEASDVANAIYD-GTDAVMLSG 333 (606)
T ss_dssp EE--HHHHHH----HSCGGGHHHHHHHHHHHHHHHTCCEEEE-SSSSGGGTTCSSCCHHHHHHHHHHHHH-TCSEEEECH
T ss_pred Ec--cccccC----cCCHHHHHHHHHHHHHHHHHcCCCeEEe-hHHHHHhhcCCCccHHHHHHHHHHHHc-CCCEEEecc
Confidence 52 112111 1223455555688999999999987321 100000 01224577788999998887 99999996
Q ss_pred CCCCCCcHHHHHHHHHHHHH
Q 018252 298 DTIGVGTPGTVVPMLEAVMA 317 (359)
Q Consensus 298 DT~G~~~P~~v~~lv~~l~~ 317 (359)
.|+---.|.+..+.+..+.+
T Consensus 334 ETA~G~yPveaV~~m~~I~~ 353 (606)
T 3t05_A 334 ETAAGLYPEEAVKTMRNIAV 353 (606)
T ss_dssp HHHSCSCSHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHH
Confidence 57667788887777766654
No 341
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=85.06 E-value=14 Score=34.91 Aligned_cols=118 Identities=12% Similarity=0.073 Sum_probs=74.5
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++.+-+.-++.|.+ ..|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 34 v~~li~~Gv~Gl~v~GtTGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpViaGv---------g~~~t~~ai~la~~A 98 (311)
T 3h5d_A 34 IEHLLAHHTDGILLAGTTAESP-----TLTHDEELELFAAVQKVVNG-RVPLIAGV---------GTNDTRDSIEFVKEV 98 (311)
T ss_dssp HHHHHHTTCCCEEESSTTTTGG-----GSCHHHHHHHHHHHHHHSCS-SSCEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHHHHH
Confidence 5566778999888887777764 34566666666666555432 24553222 234667888899999
Q ss_pred HHCCc-CEEEEc-CCCCCCcHHHHHHHHHHHHHhCCCceEEEE-----eCCCCCcHHHHHH
Q 018252 287 HDMGC-FEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVH-----LHDTYGQSLPNIL 340 (359)
Q Consensus 287 ~~~Ga-d~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H-----~HNd~GLAlANal 340 (359)
.++|+ |.+-+. =..-..+++.+.+.++++.+..+ +||-++ .+.++...+-.-|
T Consensus 99 ~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P~~tg~~l~~~~~~~L 158 (311)
T 3h5d_A 99 AEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASD-LPIIIYNIPGRVVVELTPETMLRL 158 (311)
T ss_dssp HHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCS-SCEEEEECHHHHSSCCCHHHHHHH
T ss_pred HhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEecccccCCCCCHHHHHHH
Confidence 99886 865443 33444567888888888888764 455543 3455555544333
No 342
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=85.03 E-value=2.1 Score=40.46 Aligned_cols=82 Identities=9% Similarity=0.049 Sum_probs=67.1
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEE-EeCCCCCcHHHHHHHHHHc
Q 018252 271 EGAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAV-HLHDTYGQSLPNILISLQV 345 (359)
Q Consensus 271 ~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~-H~HNd~GLAlANalaAv~A 345 (359)
.+..|.+.+.++++.+.+.|++-|.++-|.| .+++++-.++++.+.+... .+++-+ -++|+.--++..+..|-++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~ 106 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKL 106 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhc
Confidence 3578999999999999999999999999988 4668888888888887653 355544 3567778888899999999
Q ss_pred CCCEEec
Q 018252 346 SPMHAKP 352 (359)
Q Consensus 346 Ga~~ID~ 352 (359)
||+.+=+
T Consensus 107 Gadavlv 113 (306)
T 1o5k_A 107 GANGVLV 113 (306)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998744
No 343
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=85.01 E-value=1.8 Score=40.68 Aligned_cols=81 Identities=7% Similarity=0.007 Sum_probs=66.5
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEE-EeCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAV-HLHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~-H~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.| .+++++-.++++.+.+... .+++-+ -++|+.--++..+..|-++|
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 95 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAG 95 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999988 4678888888888887653 345444 45677788888999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.|=+
T Consensus 96 adavlv 101 (292)
T 2vc6_A 96 ADGVLI 101 (292)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998743
No 344
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=84.97 E-value=4.4 Score=37.76 Aligned_cols=61 Identities=13% Similarity=-0.088 Sum_probs=49.3
Q ss_pred HHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 285 ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 285 ~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
++.++|+|.|.| |+ +.|+.+.+.++.++..+|+++|..=+ |.-..|+.+-.++||+.|-+.
T Consensus 197 ~A~~aGaD~I~l-d~---~~~~~l~~~v~~l~~~~~~~~i~AsG----GI~~~ni~~~~~aGaD~i~vG 257 (273)
T 2b7n_A 197 NAMNAGADIVMC-DN---LSVLETKEIAAYRDAHYPFVLLEASG----NISLESINAYAKSGVDAISVG 257 (273)
T ss_dssp HHHHHTCSEEEE-ET---CCHHHHHHHHHHHHHHCTTCEEEEES----SCCTTTHHHHHTTTCSEEECT
T ss_pred HHHHcCCCEEEE-CC---CCHHHHHHHHHHhhccCCCcEEEEEC----CCCHHHHHHHHHcCCcEEEEc
Confidence 344579999997 66 56999999999888888888888766 566778888899999998764
No 345
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=84.88 E-value=2.6 Score=38.28 Aligned_cols=68 Identities=12% Similarity=0.048 Sum_probs=54.5
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEE
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~I 350 (359)
.+++...++++.+.+.|++.|.+.=+ +| .-.+.|+.+++++|+..|+.-.=- -...+..|+++||+.|
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~-~a~~~I~~l~~~~p~~~IGAGTVl----t~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLR----TE-AGLAAISAIKKAVPEAIVGAGTVC----TADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHHHHHCTTSEEEEECCC----SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC----Cc-cHHHHHHHHHHHCCCCeEeecccc----CHHHHHHHHHcCCCEE
Confidence 48899999999999999998888422 33 345778889999998888885433 3678889999999988
No 346
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=84.75 E-value=25 Score=32.68 Aligned_cols=129 Identities=12% Similarity=0.029 Sum_probs=79.7
Q ss_pred HHHHHHHHhCCC-CEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCChHhHHHHHHcCCC---EEEEecCCch
Q 018252 151 VELIRRLVSSGL-PVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAK---EVAIFASASE 226 (359)
Q Consensus 151 ~~ia~~L~~aGv-~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~~gie~a~~aGv~---~V~i~~s~S~ 226 (359)
..+++.+.+.|. +.+-+.+| +.+.+...-+..|.+.+..++.+..+++.....|++ .+.+..+.
T Consensus 145 ~~v~~~l~~~~~~~~vii~Sf----------~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~-- 212 (292)
T 3mz2_A 145 ERTAQLITDMQAEPYVMITVH----------DGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPK-- 212 (292)
T ss_dssp HHHHHHHHHTTCTTTEEEEES----------SHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESS--
T ss_pred HHHHHHHHHcCCCCCEEEEEC----------CHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeeccc--
Confidence 356677777775 45666665 333443333456788888888888888888777865 23332221
Q ss_pred HHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC--CCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCc
Q 018252 227 AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC--PVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGT 304 (359)
Q Consensus 227 ~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~--~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~ 304 (359)
.+. .-.+.++.|+++|+.|.+ |.. ++ .......-.+..+.+.++|||.|. .| .
T Consensus 213 --------~~~-----~~~~~V~~ah~~G~~V~v-----WTv~t~d-~~~~~~~~~~~~~~L~~~GVDgIi-TD-----~ 267 (292)
T 3mz2_A 213 --------ITP-----EVREVIDMLHERGVMCMI-----STAPSDD-KLSTPESRAEAYRMIIRQGVDIIE-SD-----R 267 (292)
T ss_dssp --------CCH-----HHHHHHHHHHHTTBCEEE-----ECTTTGG-GSSSHHHHHHHHHHHHHTTCCEEE-ES-----C
T ss_pred --------ccc-----cCHHHHHHHHHCCCEEEE-----EeCCCcc-hhhhccccHHHHHHHHHcCCCEEE-eC-----C
Confidence 111 114678999999999853 432 11 111222334577889999999886 55 6
Q ss_pred HHHHHHHHHHHH
Q 018252 305 PGTVVPMLEAVM 316 (359)
Q Consensus 305 P~~v~~lv~~l~ 316 (359)
|..+.++++..+
T Consensus 268 P~~l~~~L~~~~ 279 (292)
T 3mz2_A 268 PIEVAEAISSLI 279 (292)
T ss_dssp HHHHHHHHGGGS
T ss_pred HHHHHHHHHHhc
Confidence 888888776544
No 347
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=84.71 E-value=4.9 Score=37.02 Aligned_cols=165 Identities=13% Similarity=0.036 Sum_probs=80.8
Q ss_pred HHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEE---EeCChH----hHHHHHHcCC-CEEEEecCCc
Q 018252 154 IRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPV---LTPNLK----GFEAAIAAGA-KEVAIFASAS 225 (359)
Q Consensus 154 a~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~---l~~n~~----gie~a~~aGv-~~V~i~~s~S 225 (359)
.+.|.+.|.+.||+|.+-+ + |+-...+.+++.+++.+ ..+.. .+.+.+ -++.+.++|. +.|.+.+...
T Consensus 29 ~~~l~~~Gad~ielg~pr~-~--~~g~~~~~~~~~l~~~~-~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d 104 (264)
T 1xm3_A 29 KEAVAVSESDILTFAVRRM-N--IFEASQPNFLEQLDLSK-YTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVIGC 104 (264)
T ss_dssp HHHHHHHTCSEEEEETTSS-T--TC-------CTTCCGGG-SEEEEECTTCSSHHHHHHHHHHHHHTTCCSSEEECCBCC
T ss_pred HHHHHHcCCeEEEEccccc-c--cCCCCHHHHHHHHHhcC-CeEcCCccccCCHHHHHHHHHHHHHcCCCCeEEEeecCC
Confidence 4689999999999997422 1 21112233444444321 11110 112322 2344555543 4455433211
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhC---CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE-cCCCC
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVL---SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL-GDTIG 301 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~---G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L-~DT~G 301 (359)
... .++...+.++.++++ |+.+.... . .+++ .++++.+.|++-|.- .-.+|
T Consensus 105 ~~~-----------~~~e~~~~~~~a~~~~~~g~~vi~~~-----~-----~~~~----~a~~~~~~gad~v~~~~~~~G 159 (264)
T 1xm3_A 105 SRS-----------LLPDPVETLKASEQLLEEGFIVLPYT-----S-----DDVV----LARKLEELGVHAIMPGASPIG 159 (264)
T ss_dssp TTT-----------CCBCHHHHHHHHHHHHHTTCCEEEEE-----C-----SCHH----HHHHHHHHTCSCBEECSSSTT
T ss_pred Ccc-----------cccchHHHHHHHHHHHCCCeEEEEEc-----C-----CCHH----HHHHHHHhCCCEEEECCcccC
Confidence 110 011233555666666 88873211 1 1333 466677788886522 22233
Q ss_pred CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEEec
Q 018252 302 VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHAKP 352 (359)
Q Consensus 302 ~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~ID~ 352 (359)
......-.+.++.+++.. ++++.+- .|.. -.++..++++||+.|=+
T Consensus 160 t~~~~~~~~~l~~i~~~~-~iPviv~----gGI~t~eda~~~~~~GAdgViV 206 (264)
T 1xm3_A 160 SGQGILNPLNLSFIIEQA-KVPVIVD----AGIGSPKDAAYAMELGADGVLL 206 (264)
T ss_dssp CCCCCSCHHHHHHHHHHC-SSCBEEE----SCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCHHHHHHHHhcC-CCCEEEE----eCCCCHHHHHHHHHcCCCEEEE
Confidence 221111134666666643 4566554 3775 57888999999998744
No 348
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=84.62 E-value=2.2 Score=41.02 Aligned_cols=70 Identities=10% Similarity=-0.074 Sum_probs=45.5
Q ss_pred HHHHHHHHHHCCcCEEEEcCCCC-CCcHHHHHHH--------HHHHH-HhCC----CceEEEEeCCCCCcHHHHHHHHHH
Q 018252 279 VAYVAKELHDMGCFEISLGDTIG-VGTPGTVVPM--------LEAVM-AVVP----VEKLAVHLHDTYGQSLPNILISLQ 344 (359)
Q Consensus 279 l~~~a~~l~~~Gad~I~L~DT~G-~~~P~~v~~l--------v~~l~-~~~p----~~~L~~H~HNd~GLAlANalaAv~ 344 (359)
+.++++...++|++.|.+.|+.| .+.|..+.++ ++.++ +..| ++++-+|+.++ +.-+. .-.+
T Consensus 199 ~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~~~l~---~l~~ 274 (367)
T 1r3s_A 199 LVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-HFALE---ELAQ 274 (367)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-GGGHH---HHTT
T ss_pred HHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-HHHHH---HHHh
Confidence 34455566688999999998654 5577766544 55555 4433 57888888876 43332 3346
Q ss_pred cCCCEEec
Q 018252 345 VSPMHAKP 352 (359)
Q Consensus 345 AGa~~ID~ 352 (359)
.|++.+..
T Consensus 275 ~g~d~i~~ 282 (367)
T 1r3s_A 275 AGYEVVGL 282 (367)
T ss_dssp SSCSEEEC
T ss_pred cCCCEEEe
Confidence 89888764
No 349
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=84.61 E-value=1.8 Score=40.77 Aligned_cols=81 Identities=10% Similarity=-0.049 Sum_probs=66.6
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCC-CceEEE-EeCCCCCcHHHHHHHHHHcC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAV-HLHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p-~~~L~~-H~HNd~GLAlANalaAv~AG 346 (359)
+..|.+.+.++++.+.+.|++-|.++-|.| .+++++-.++++.+.+... .+++-+ -++|+..-++..+..|-++|
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 95 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAG 95 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999988 4678888888888887653 345544 35678888888999999999
Q ss_pred CCEEec
Q 018252 347 PMHAKP 352 (359)
Q Consensus 347 a~~ID~ 352 (359)
|+.+=+
T Consensus 96 adavlv 101 (297)
T 2rfg_A 96 ADAVLC 101 (297)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998744
No 350
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=84.59 E-value=12 Score=35.60 Aligned_cols=118 Identities=14% Similarity=0.054 Sum_probs=66.8
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEee--eecCCC------CCC-CC
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSC--VVGCPV------EGA-IP 275 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~--~fg~~~------~~r-~~ 275 (359)
+.++.+.+.|+..|++-+-+.+. -+. ..++.+.++++.|+++|++|...+-. .|..|- +-. .+
T Consensus 31 ~~~~ilk~~G~n~vRlri~v~P~-----~g~---~d~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~q~~p~~W~~~~ 102 (334)
T 1fob_A 31 ALETILADAGINSIRQRVWVNPS-----DGS---YDLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTD 102 (334)
T ss_dssp CHHHHHHHHTCCEEEEEECSCCT-----TCT---TCHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSCSSC
T ss_pred hHHHHHHHcCCCEEEEEEEECCC-----CCc---cCHHHHHHHHHHHHHCCCEEEEEeccCCCCCCcccccCccccccCC
Confidence 34666777899987774322221 011 12667889999999999998765521 122221 000 12
Q ss_pred H--------HHHHHHHHHHHHCC--cCEEEEcC--CCCCC-------cHHHHHHHH----HHHHHhC--CCceEEEEeCC
Q 018252 276 P--------SKVAYVAKELHDMG--CFEISLGD--TIGVG-------TPGTVVPML----EAVMAVV--PVEKLAVHLHD 330 (359)
Q Consensus 276 ~--------e~l~~~a~~l~~~G--ad~I~L~D--T~G~~-------~P~~v~~lv----~~l~~~~--p~~~L~~H~HN 330 (359)
. +|..++++++.+.| ++.+.+.- +.|.+ ....+.+++ +++|+.. |..++.+|+.+
T Consensus 103 ~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~~~ 182 (334)
T 1fob_A 103 LGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDD 182 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEEEEcCC
Confidence 2 23345666677766 45665443 23443 234454444 3466666 77789999987
No 351
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=84.51 E-value=12 Score=38.22 Aligned_cols=192 Identities=13% Similarity=0.084 Sum_probs=114.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc--------CCCeEEEEeCChHhHH---HHHH
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL--------EGARLPVLTPNLKGFE---AAIA 212 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~--------~~~~l~~l~~n~~gie---~a~~ 212 (359)
.++..++..+++.-.+.|+|.|-+.| +.. -.|-.++.+.+.+. .++.+.+=+.+.++++ ..++
T Consensus 212 ~lTekD~~D~l~fa~~~~vD~ialSF-Vr~-----~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~ 285 (526)
T 4drs_A 212 IIGDKDRHDIVDFALKYNLDFIALSF-VQN-----GADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICS 285 (526)
T ss_dssp SSCHHHHHHHHHTTTTTTCSEEEETT-CCS-----HHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHH
T ss_pred cccchhHHHHHHHHHHhccCeeeecc-cCc-----hhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHh
Confidence 45667788888888899999987765 332 14666677777642 2455666666766554 3333
Q ss_pred cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-CCCCCCCHHHHHHHHHHHHHCCc
Q 018252 213 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-PVEGAIPPSKVAYVAKELHDMGC 291 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-~~~~r~~~e~l~~~a~~l~~~Ga 291 (359)
. .|.|.+- --|+-.+ ...++....-+.+++.|+.+|.+|...= ...-. -...+-+..++.+++.++.+ |+
T Consensus 286 ~-sDgIMVA--RGDLgvE----ip~e~vp~~QK~II~~c~~~gKPVI~AT-QmLeSMi~np~PTRAEvsDVAnAV~D-Ga 356 (526)
T 4drs_A 286 E-SDGIMVA--RGDLGME----IPPEKIFVAQKCMISKCNVAGKPVVTAT-QMLESMIKSNRPTRAEMTDVANAVLD-GS 356 (526)
T ss_dssp H-SSEEEEE--CTTHHHH----SCGGGHHHHHHHHHHHHHHHTCCEEEES-CTTGGGGSSSSCCHHHHHHHHHHHHH-TC
T ss_pred h-ccEEEEE--CCccccc----CCHHHHHHHHHHHHHHHHHcCCeEEEhh-hhhHHHhhCCCCCCchHHHHHHHHHh-CC
Confidence 2 3555552 1121111 2233344444788999999999884211 00000 01224577889999998887 99
Q ss_pred CEEEEc-CCCCCCcHHHHHHHHHHHHHhCC---CceEEEE---eCCC------CCcHHHHHHHHHHcCCCEE
Q 018252 292 FEISLG-DTIGVGTPGTVVPMLEAVMAVVP---VEKLAVH---LHDT------YGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 292 d~I~L~-DT~G~~~P~~v~~lv~~l~~~~p---~~~L~~H---~HNd------~GLAlANalaAv~AGa~~I 350 (359)
|.|.|. .|+=.-.|.+..+.+..+.+... .....+| .+.. -..|.|...+|...+|..|
T Consensus 357 DavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aI 428 (526)
T 4drs_A 357 DCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIHSSVPKPVAVPEAIACSAVESAHDVNAKLI 428 (526)
T ss_dssp SEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHTTCSEE
T ss_pred ceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhhhccCCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 999997 67777789988888877765431 1111111 1111 1245566677788888765
No 352
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=84.45 E-value=9.1 Score=36.41 Aligned_cols=182 Identities=12% Similarity=0.030 Sum_probs=95.8
Q ss_pred HHHHHHhCCCCEEEEecc------CCCCCcCCCCCHHHHHHHhhhc---CCCeEEEEeC----Ch----HhHHHHHHcCC
Q 018252 153 LIRRLVSSGLPVVEATSF------VSPKWVPQLADARDVMEAVRDL---EGARLPVLTP----NL----KGFEAAIAAGA 215 (359)
Q Consensus 153 ia~~L~~aGv~~IEvG~f------vspk~vPq~~D~~ev~~~l~~~---~~~~l~~l~~----n~----~gie~a~~aGv 215 (359)
-++.+.++|++.|=+|.+ ..|+.. .-..++++..++.+ .+.-+++=.+ +. +-++...++|+
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~~~G~pD~~--~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGa 118 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTASKGLPDLG--IVTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKV 118 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHTCCSSS--CSCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCC--cCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 355778899999999851 223321 13456666555532 2222222223 21 23445567899
Q ss_pred CEEEEecCCchHHHHhhhc---CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 216 KEVAIFASASEAFSKSNIN---CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 216 ~~V~i~~s~S~~~~~~n~~---~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
.-|++-....+--.-+.-| .+.++..++++.+++. .-++.+.+--- ++. ....+..++-++...++|||
T Consensus 119 agv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A--~~~~~I~ARtd-a~~-----~~g~~~ai~Ra~ay~eAGAD 190 (305)
T 3ih1_A 119 AAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV--APSLYIVARTD-ARG-----VEGLDEAIERANAYVKAGAD 190 (305)
T ss_dssp SEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH--CTTSEEEEEEC-CHH-----HHCHHHHHHHHHHHHHHTCS
T ss_pred cEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc--CCCeEEEEeec-ccc-----ccCHHHHHHHHHHHHHcCCC
Confidence 9999976543211100011 2567777777666554 22333322111 010 11367888888999999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc-HHHHHHHHHHcCCCEEece
Q 018252 293 EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 293 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL-AlANalaAv~AGa~~ID~t 353 (359)
.|.+. |.-+++++.++.+.+ + +|+-+-.- .+|. ..-+.-.--++|+++|-..
T Consensus 191 ~i~~e---~~~~~~~~~~i~~~~----~-~P~~~n~~-~~g~tp~~~~~eL~~lGv~~v~~~ 243 (305)
T 3ih1_A 191 AIFPE---ALQSEEEFRLFNSKV----N-APLLANMT-EFGKTPYYSAEEFANMGFQMVIYP 243 (305)
T ss_dssp EEEET---TCCSHHHHHHHHHHS----C-SCBEEECC-TTSSSCCCCHHHHHHTTCSEEEEC
T ss_pred EEEEc---CCCCHHHHHHHHHHc----C-CCEEEeec-CCCCCCCCCHHHHHHcCCCEEEEc
Confidence 99885 234556655555544 3 24422110 0111 0123455667788887544
No 353
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=84.27 E-value=7.6 Score=37.36 Aligned_cols=115 Identities=11% Similarity=0.093 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-----------C----CC----C--CCCH-------HHHHHHHHHHHH
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-----------P----VE----G--AIPP-------SKVAYVAKELHD 288 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-----------~----~~----~--r~~~-------e~l~~~a~~l~~ 288 (359)
.++.++.++++++.+++.|-++...|.+. |- | .. . ..+. +.+.+.++.+.+
T Consensus 76 ~d~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~ 154 (343)
T 3kru_A 76 NDEQVKELKKIVDICKANGAVMGIQLAHA-GRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANL 154 (343)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCceEeeehhhc-cCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccc
Confidence 35677888899999999999887777642 10 0 00 0 0222 345556667778
Q ss_pred CCcCEEEEc-------------------CCCCCCc---HHHHHHHHHHHHHhCC-CceEEEEeCCC----CCcHHHH---
Q 018252 289 MGCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVP-VEKLAVHLHDT----YGQSLPN--- 338 (359)
Q Consensus 289 ~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p-~~~L~~H~HNd----~GLAlAN--- 338 (359)
+|.|.|.|- |-.|... +..+.++++++++.++ +.+|++-..-+ -|..+..
T Consensus 155 aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~ 234 (343)
T 3kru_A 155 AGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVE 234 (343)
T ss_dssp HTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHH
T ss_pred cCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHH
Confidence 899977764 5556433 4556889999999885 45677754432 2333332
Q ss_pred -HHHHHHcCCCEEece
Q 018252 339 -ILISLQVSPMHAKPC 353 (359)
Q Consensus 339 -alaAv~AGa~~ID~t 353 (359)
+...-++ +++|+++
T Consensus 235 ~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 235 YINMIKDK-VDLIDVS 249 (343)
T ss_dssp HHHHHTTT-CSEEEEE
T ss_pred HHHHhhcc-ccEEecc
Confidence 2333345 9999886
No 354
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=84.27 E-value=24 Score=35.17 Aligned_cols=146 Identities=16% Similarity=-0.007 Sum_probs=87.6
Q ss_pred hHHHHHHcCCCEEEEecCCc-hHHHHhhhc---CCHHHHHHHHHHHHHHHHhCCCcEEE-EEeeeec-------------
Q 018252 206 GFEAAIAAGAKEVAIFASAS-EAFSKSNIN---CSIEDSLVRYRAVAHAAKVLSIPVRG-YVSCVVG------------- 267 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S-~~~~~~n~~---~t~~e~l~~i~~~i~~Ak~~G~~V~~-~is~~fg------------- 267 (359)
-++..+++|+--|+|-..+. +-..-+.-| .+.++.+++++.+...+...|.++.+ .=+.+..
T Consensus 165 tVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d~rd~ 244 (433)
T 3eol_A 165 IMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDIDERDQ 244 (433)
T ss_dssp HHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCSTTTG
T ss_pred HHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCcccccc
Confidence 35667789999999987654 221111112 36899999999888887766654311 1111110
Q ss_pred ---CCCCC---------CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc-
Q 018252 268 ---CPVEG---------AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ- 334 (359)
Q Consensus 268 ---~~~~~---------r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL- 334 (359)
..+.. +...+..++-+++..+ |||.|.+ .+ |.-+++++.++.+.++..+|...+.+-+--.+..
T Consensus 245 ~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~-e~-~~~~~eei~~f~~~v~~~~P~~~L~~~~sPsfnw~ 321 (433)
T 3eol_A 245 PFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWM-ET-SKPDLAQARRFAEAVHKAHPGKLLAYNCSPSFNWK 321 (433)
T ss_dssp GGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEE-CC-SSCCHHHHHHHHHHHHHHSTTCCEEEECCSSSCHH
T ss_pred cceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEE-eC-CCCCHHHHHHHHHHhcccCCCcccccCCCCCCccc
Confidence 00000 1346778888887788 9999986 22 4568999999999999888875666533222321
Q ss_pred ---H---HHH-HHHHHHcCCCEEecee
Q 018252 335 ---S---LPN-ILISLQVSPMHAKPCF 354 (359)
Q Consensus 335 ---A---lAN-alaAv~AGa~~ID~tl 354 (359)
. +.+ .-.--++|+.+|=.++
T Consensus 322 ~~~~~~~~~~f~~eLa~lGv~~v~~~~ 348 (433)
T 3eol_A 322 KNLDDATIAKFQRELGAMGYKFQFITL 348 (433)
T ss_dssp HHSCHHHHHHHHHHHHHHTEEEEEETT
T ss_pred ccCChhHHhHHHHHHHHcCCeEEEeCc
Confidence 1 111 2344467888875543
No 355
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=84.11 E-value=1.8 Score=40.20 Aligned_cols=147 Identities=16% Similarity=0.039 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh--cCCCeEEE--------EeCCh--HhHHHHHH
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD--LEGARLPV--------LTPNL--KGFEAAIA 212 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~--~~~~~l~~--------l~~n~--~gie~a~~ 212 (359)
++...-..+++...+ =||.+=+|+..+. +.+.+.+.+.+.. .-++.+.. +..+. +-++.+.+
T Consensus 23 lg~~~~~d~Le~~g~-yID~lKfg~Gt~~-----l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~ 96 (251)
T 1qwg_A 23 LPPKFVEDYLKVCGD-YIDFVKFGWGTSA-----VIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEK 96 (251)
T ss_dssp CCHHHHHHHHHHHGG-GCSEEEECTTGGG-----GSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhh-hcceEEecCceee-----ecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHH
Confidence 555555555443322 2677777764321 1232334444442 23333321 11222 23677778
Q ss_pred cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC---CCCCHHHHHHHHHHHHHC
Q 018252 213 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE---GAIPPSKVAYVAKELHDM 289 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~---~r~~~e~l~~~a~~l~~~ 289 (359)
.|.+.|-+....-+. + .+.-.++|+.+++.|++|.. ++|.-+. ...+|+.+.+.+++..++
T Consensus 97 lGf~~iEiS~G~i~l--------~----~~~~~~~I~~~~~~G~~v~~----EvG~k~~~~~~~~~~~~~I~~~~~~LeA 160 (251)
T 1qwg_A 97 LGFEAVEISDGSSDI--------S----LEERNNAIKRAKDNGFMVLT----EVGKKMPDKDKQLTIDDRIKLINFDLDA 160 (251)
T ss_dssp HTCCEEEECCSSSCC--------C----HHHHHHHHHHHHHTTCEEEE----EECCSSHHHHTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEECCCcccC--------C----HHHHHHHHHHHHHCCCEEee----eccccCCcccCCCCHHHHHHHHHHHHHC
Confidence 899999996543222 2 23345788999999999843 4454332 467999999999999999
Q ss_pred CcCEEE-----------EcCCCCCCcHHHHHHHHH
Q 018252 290 GCFEIS-----------LGDTIGVGTPGTVVPMLE 313 (359)
Q Consensus 290 Gad~I~-----------L~DT~G~~~P~~v~~lv~ 313 (359)
||+.|. |+|..|-.....+.++++
T Consensus 161 GA~~ViiEarEsG~~iGi~~~~g~~r~d~v~~i~~ 195 (251)
T 1qwg_A 161 GADYVIIEGRESGKGKGLFDKEGKVKENELDVLAK 195 (251)
T ss_dssp TCSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHT
T ss_pred CCcEEEEeeecccCCcccCCCCCCCcHHHHHHHHH
Confidence 998654 444556666666665544
No 356
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=83.91 E-value=29 Score=32.74 Aligned_cols=147 Identities=16% Similarity=0.138 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHhCCCCEEEEec-cCCCCCcCCCCCHHH-HHHH----hhhcCCCeEEEEeCCh-HhHHHHHHcCCCEEE
Q 018252 147 TGVKVELIRRLVSSGLPVVEATS-FVSPKWVPQLADARD-VMEA----VRDLEGARLPVLTPNL-KGFEAAIAAGAKEVA 219 (359)
Q Consensus 147 ~~~k~~ia~~L~~aGv~~IEvG~-fvspk~vPq~~D~~e-v~~~----l~~~~~~~l~~l~~n~-~gie~a~~aGv~~V~ 219 (359)
++..+++++...++|++.|-+.- .++...++ -.+.++ ++.. +..+.+..+..++.+. .-++...++|++.+.
T Consensus 189 ~~~~~~~~~~qi~aGad~i~i~D~~a~~~~ls-p~~f~~f~~p~~k~i~~~~~~~~iih~~g~~~~~l~~~~~~g~d~i~ 267 (348)
T 4ay7_A 189 TEASIIYANAMVEAGADVIAIADPVASPDLMS-PDSFRQFLKSRLQKFASSVNSVTVLHICGNVNPILSDMADCGFEGLS 267 (348)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECGGGSTTTSC-HHHHHHHHHHHHHHHHHHSSSEEEEECCSCCHHHHHHHHTSCCSEEE
T ss_pred HHHHHHHHHHHHhcCCCcceeeccccccccCC-HHHHHHHhhHHHHHHHhhccCCcEEEecCCcHHHHHHHHHhcccccc
Confidence 34455677778889999998862 12211110 012222 2222 2334555555666654 567888889999876
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHh-CC--CcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV-LS--IPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL 296 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~-~G--~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L 296 (359)
+--.+.+ + +.+|+ .| +.++|+|...... -.-+++.+.+-++++.+-|-+.+++
T Consensus 268 ~d~~~~~--------------~-------~~~k~~~g~~~~l~Gnldp~~~l---~~g~~e~i~~~v~~~l~~~g~I~~~ 323 (348)
T 4ay7_A 268 VEEKIGS--------------A-------KKGKEVIGTRARLVGNVSSPFTL---LPGPVDKIKAEAKEALEGGIDVLAP 323 (348)
T ss_dssp CCGGGCC--------------H-------HHHHHHHTTSSEEEEEECCCCCC---TTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ccchhhH--------------H-------HHHHHHhCCCEEEEcCCCChHhh---cCCCHHHHHHHHHHHHhCCCCEEeC
Confidence 5221111 1 11222 23 4567777421111 1237899999999999988899988
Q ss_pred cCCCCCC-cHHHHHHHHHHHHHh
Q 018252 297 GDTIGVG-TPGTVVPMLEAVMAV 318 (359)
Q Consensus 297 ~DT~G~~-~P~~v~~lv~~l~~~ 318 (359)
.=.+-.- .|+.+..+++++++.
T Consensus 324 Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 324 GCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp SSSCCTTCCHHHHHHHHHHHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHh
Confidence 6443333 457799999988874
No 357
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=83.89 E-value=4.8 Score=37.27 Aligned_cols=149 Identities=14% Similarity=0.065 Sum_probs=83.0
Q ss_pred ccEEEeCCCcccCCCCCCCCCHHH-------HHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc-----C
Q 018252 126 FVKIVEVGPRDGLQNEKNTVPTGV-------KVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-----E 193 (359)
Q Consensus 126 ~V~I~D~TLRDG~Q~~~~~~~~~~-------k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~-----~ 193 (359)
.+.+.-..++.| ..+.++ -.+.++.|.++|++.|=+++.....+. .+.-...+.+.+++. +
T Consensus 54 ~~~~~~ar~~~~------~v~~~~l~~~~~~l~~aa~~L~~~g~d~IviaCnta~~~~-G~~~~~~~~~~l~~~~~~~~~ 126 (273)
T 2xed_A 54 EFSFHSTRMRMH------TVSPEGLAAMNAQRERCVLEIADAAPEVILYACLVAVMVG-GPGEHHRVESAVAEQLATGGS 126 (273)
T ss_dssp CEEEEEEEECCC------BCSHHHHHHHHTTHHHHHHHHHTTCCSEEEECCHHHHHTT-CTTHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEeCCccC------CCCHHHHHHHHHHHHHHHHHHhhcCCCEEEECCChHHHhc-ccchhHHHHHHHHHHhhccCC
Confidence 355555556666 123333 244678899999999999864321000 001112233444432 2
Q ss_pred CCeEEEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCC---
Q 018252 194 GARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV--- 270 (359)
Q Consensus 194 ~~~l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~--- 270 (359)
++.+.... ..-++.+...|.++|.+..+....- -+ ...++.++.|++|....+ .+..+
T Consensus 127 ~iPv~~~~--~A~~~al~~~g~~rvgvltp~~~~~------------~~---~~~~~l~~~Gi~v~~~~~--~~~~~~~~ 187 (273)
T 2xed_A 127 QALVRSSA--GALVEGLRALDAQRVALVTPYMRPL------------AE---KVVAYLEAEGFTISDWRA--LEVADNTE 187 (273)
T ss_dssp CCEEEEHH--HHHHHHHHHTTCCEEEEEECSCHHH------------HH---HHHHHHHHTTCEEEEEEE--CCCCBHHH
T ss_pred CCCEecHH--HHHHHHHHHcCCCeEEEEcCChhhh------------HH---HHHHHHHHCCCEEecccc--CCCccchh
Confidence 55554432 2223444456889999987643221 11 223444567998743332 22221
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEc-CCC
Q 018252 271 EGAIPPSKVAYVAKELHDMGCFEISLG-DTI 300 (359)
Q Consensus 271 ~~r~~~e~l~~~a~~l~~~Gad~I~L~-DT~ 300 (359)
.++.+++.+.++++++.+.|+|.|.|. -|-
T Consensus 188 ~g~~~~~~l~~~~~~l~~~gadaIvLg~CT~ 218 (273)
T 2xed_A 188 VGCIPGEQVMAAARSLDLSEVDALVISCAVQ 218 (273)
T ss_dssp HHTCCHHHHHHHHHHSCCTTCSEEEEESSSS
T ss_pred hcccCHHHHHHHHHHHhhCCCCEEEEcCCCC
Confidence 235678889999999877899999998 543
No 358
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=83.89 E-value=5.6 Score=35.34 Aligned_cols=17 Identities=6% Similarity=0.077 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHhCCCc
Q 018252 241 LVRYRAVAHAAKVLSIP 257 (359)
Q Consensus 241 l~~i~~~i~~Ak~~G~~ 257 (359)
++.+++.++.|+++|.+
T Consensus 84 ~~~~~~~i~~a~~lG~~ 100 (272)
T 2q02_A 84 VKKTEGLLRDAQGVGAR 100 (272)
T ss_dssp HHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 34444444555555444
No 359
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=83.85 E-value=15 Score=33.52 Aligned_cols=91 Identities=22% Similarity=0.172 Sum_probs=61.7
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCCCceEEE--E--e----CCCCC
Q 018252 265 VVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAV--H--L----HDTYG 333 (359)
Q Consensus 265 ~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~L~~--H--~----HNd~G 333 (359)
+.+.|. +..+.+--+.-++.+.+.|||+|-+.=-+|. ..-..+.+-+.++++..++.++=+ - . |++--
T Consensus 69 VigFP~-G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~ee 147 (231)
T 3ndo_A 69 VAGFPS-GKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPL 147 (231)
T ss_dssp EESTTT-CCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHH
T ss_pred EecCCC-CCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHH
Confidence 356664 4555666666677788899999999888887 566777888888887765432221 1 1 12222
Q ss_pred cHHHHHHHHHHcCCCEEeceeeec
Q 018252 334 QSLPNILISLQVSPMHAKPCFTFA 357 (359)
Q Consensus 334 LAlANalaAv~AGa~~ID~tl~~~ 357 (359)
. ..-+..|+++|||+|-++.-|.
T Consensus 148 i-~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 148 L-ADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp H-HHHHHHHHHTTCSEEECCCSCC
T ss_pred H-HHHHHHHHHHCcCEEEcCCCCC
Confidence 2 2455778899999999997664
No 360
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=83.79 E-value=20 Score=32.66 Aligned_cols=166 Identities=14% Similarity=0.008 Sum_probs=89.3
Q ss_pred HHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCChHhHHHHHHcCCCEEEEe---cCCchHHH
Q 018252 153 LIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIF---ASASEAFS 229 (359)
Q Consensus 153 ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~~gie~a~~aGv~~V~i~---~s~S~~~~ 229 (359)
.++.+.++|.|.|++|.-..- ...+..++++.+++ .++.+..+.-+...+ ..|+|-+-+. .+.++.|.
T Consensus 23 ~~~~~~~~GtD~i~vGGs~gv----t~~~~~~~v~~ik~-~~~Pvvlfp~~~~~v----~~gaD~~l~pslln~~~~~~i 93 (228)
T 3vzx_A 23 QLEILCESGTDAVIIGGSDGV----TEDNVLRMMSKVRR-FLVPCVLEVSAIEAI----VPGFDLYFIPSVLNSKNADWI 93 (228)
T ss_dssp HHHHHHTSSCSEEEECCCSCC----CHHHHHHHHHHHTT-SSSCEEEECSCGGGC----CSCCSEEEEEEETTBSSGGGT
T ss_pred HHHHHHHcCCCEEEECCcCCC----CHHHHHHHHHHhhc-cCCCEEEeCCCHHHc----cccCCEEEEeeecCCCCcchh
Confidence 455678999999999973211 01223334444444 344444444455433 3688876653 22233331
Q ss_pred HhhhcCCHHHHHHHHHHHHHHHHhCCC-----cE--EEEEeeeecCCCCC---------CCCHHHHHHHHHHHHHCCcCE
Q 018252 230 KSNINCSIEDSLVRYRAVAHAAKVLSI-----PV--RGYVSCVVGCPVEG---------AIPPSKVAYVAKELHDMGCFE 293 (359)
Q Consensus 230 ~~n~~~t~~e~l~~i~~~i~~Ak~~G~-----~V--~~~is~~fg~~~~~---------r~~~e~l~~~a~~l~~~Gad~ 293 (359)
. | .-++.+++.|+ ++ .+|+.. .|... ..+++.+...+..+.-+|-.-
T Consensus 94 ~---g-----------~~~~a~~~~g~~~~~~e~i~~gYivv---~p~s~~~~~~~a~~~~~~e~~~~~a~~a~~~g~~~ 156 (228)
T 3vzx_A 94 V---G-----------MHQKAMKEYGELMSMEEIVAEGYCIA---NPDCKAAALTEADADLNMDDIVAYARVSELLQLPI 156 (228)
T ss_dssp T---H-----------HHHHHHHHHHHHHHHSCEEEEEEEEC---CSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSE
T ss_pred h---h-----------HHHHHHHHcCCCCcccceeeeEEEEE---CCCCcceeeecccCCCCHHHHHHHHHHHHHcCCCE
Confidence 1 1 11122355564 43 466642 23221 125688888888888888888
Q ss_pred EEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 294 ISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 294 I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
|+|-= .|.-. -.++++.+++..+++++.+=+ |.-..--...+.+||+.|=+
T Consensus 157 VYld~-sG~~~---~~~~i~~i~~~~~~~Pv~vGG----GI~t~e~a~~~~~gAD~VVV 207 (228)
T 3vzx_A 157 FYLEY-SGVLG---DIEAVKKTKAVLETSTLFYGG----GIKDAETAKQYAEHADVIVV 207 (228)
T ss_dssp EEEEC-TTSCC---CHHHHHHHHHHCSSSEEEEES----SCCSHHHHHHHHTTCSEEEE
T ss_pred EEecC-CCCcC---CHHHHHHHHHhcCCCCEEEeC----CCCCHHHHHHHHhCCCEEEE
Confidence 88765 56532 367788888876334444422 22222222333479987744
No 361
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=83.59 E-value=14 Score=34.41 Aligned_cols=76 Identities=12% Similarity=0.034 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCC-CCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTI-GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
.+++.+.+.++.+.+.|+..|.|..-- -...+..+.++++.+++. + +.++.++. .+--.....-.++|++.+..
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~--~--~~i~~s~g-~l~~e~l~~L~~ag~~~v~i 158 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM--G--VAVTLSLG-EWPREYYEKWKEAGADRYLL 158 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT--S--CEEEEECC-CCCHHHHHHHHHHTCCEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc--C--ceEEEecC-CCCHHHHHHHHHhCCCEEee
Confidence 478888888888888898888885322 112336778888888765 3 33444332 23344444555678888765
Q ss_pred ee
Q 018252 353 CF 354 (359)
Q Consensus 353 tl 354 (359)
++
T Consensus 159 ~l 160 (348)
T 3iix_A 159 RH 160 (348)
T ss_dssp CC
T ss_pred ee
Confidence 43
No 362
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=83.39 E-value=11 Score=35.19 Aligned_cols=180 Identities=10% Similarity=0.049 Sum_probs=99.5
Q ss_pred CHHHHHHHHHHHHhCC----CCEEEEeccCC-CCCcCC-CC--CHHHHHHHhhh---cCCCeEEEEeCChHhHHHHHHcC
Q 018252 146 PTGVKVELIRRLVSSG----LPVVEATSFVS-PKWVPQ-LA--DARDVMEAVRD---LEGARLPVLTPNLKGFEAAIAAG 214 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aG----v~~IEvG~fvs-pk~vPq-~~--D~~ev~~~l~~---~~~~~l~~l~~n~~gie~a~~aG 214 (359)
+.+.-+++++.|.++| +..+=-.+|-- |+.-|. +. +.++-++.+++ -.+..+..=.-+...++-+.+.
T Consensus 27 ~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~~~~g~~l~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~- 105 (280)
T 2qkf_A 27 SLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEV- 105 (280)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhhhhcceeEEEeeeeecCCCCChHHhhccchHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhh-
Confidence 7889999999999975 44222222321 222111 11 22222333332 2344444433356677766666
Q ss_pred CCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHHCCcCE
Q 018252 215 AKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAKELHDMGCFE 293 (359)
Q Consensus 215 v~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r-~~~e~l~~~a~~l~~~Gad~ 293 (359)
++.+.+-.. .-.| . ++++++...|.+|. |.. +. .+++.+...++.+...|...
T Consensus 106 ~d~~kIga~-----~~~n----~--------~ll~~~a~~~kPV~------lk~---G~~~t~~e~~~A~~~i~~~Gn~~ 159 (280)
T 2qkf_A 106 CDVIQLPAF-----LARQ----T--------DLVVAMAKTGNVVN------IKK---PQFLSPSQMKNIVEKFHEAGNGK 159 (280)
T ss_dssp CSEEEECGG-----GTTB----H--------HHHHHHHHTCCEEE------EEC---CTTSCGGGHHHHHHHHHHTTCCC
T ss_pred CCEEEECcc-----cccC----H--------HHHHHHHcCCCcEE------EEC---CCCCCHHHHHHHHHHHHHcCCCe
Confidence 777776421 1111 1 23444446788873 322 23 37778888899999999876
Q ss_pred EEEcCCCCCCcHH----HHHHHHHHHHHhCCCceEEE-EeCCC----------CC---cHHHHHHHHHHcCCC--EEece
Q 018252 294 ISLGDTIGVGTPG----TVVPMLEAVMAVVPVEKLAV-HLHDT----------YG---QSLPNILISLQVSPM--HAKPC 353 (359)
Q Consensus 294 I~L~DT~G~~~P~----~v~~lv~~l~~~~p~~~L~~-H~HNd----------~G---LAlANalaAv~AGa~--~ID~t 353 (359)
+.|+--.+...+. .+. -+..+++.+++.++++ =.|-+ .| +...-+.+|+.+||+ .|+.=
T Consensus 160 i~L~~rg~~~~~~~~~~dl~-~i~~lk~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H 238 (280)
T 2qkf_A 160 LILCERGSSFGYDNLVVDML-GFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESH 238 (280)
T ss_dssp EEEEECCEECSTTCEECCTT-HHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC-
T ss_pred EEEEECCCCCCCCccccCHH-HHHHHHHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeec
Confidence 6666644422221 222 4556888876678998 23332 44 225567899999996 66643
No 363
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=83.24 E-value=5.6 Score=35.60 Aligned_cols=71 Identities=11% Similarity=-0.002 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCCCCCc-HHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 278 KVAYVAKELHDMGCFEISLGDTIGVGT-PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT~G~~~-P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
...++++.+.++|++.|.+.|..+... .....++++.+++.++ +||-+|+--+. ...+..++++||+.|..
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~ggI~~---~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID-IPFTVGGGIHD---FETASELILRGADKVSI 102 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC-SCEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC-CCEEEeCCCCC---HHHHHHHHHcCCCEEEE
Confidence 456678899999999999988776532 2334567778887654 67888754432 35677888999998854
No 364
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=83.18 E-value=14 Score=31.42 Aligned_cols=96 Identities=23% Similarity=0.271 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCChHhHHHHHHcCCCEEEEecCCchHH
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAF 228 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~ 228 (359)
-+.-++..|...|++++-.|.++++ +++ ++.+.+.+++.|.++.....
T Consensus 34 G~~~va~~l~~~G~eVi~lG~~~p~---------e~l---------------------v~aa~~~~~diV~lS~~~~~-- 81 (161)
T 2yxb_A 34 GAKVVARALRDAGFEVVYTGLRQTP---------EQV---------------------AMAAVQEDVDVIGVSILNGA-- 81 (161)
T ss_dssp HHHHHHHHHHHTTCEEECCCSBCCH---------HHH---------------------HHHHHHTTCSEEEEEESSSC--
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCH---------HHH---------------------HHHHHhcCCCEEEEEeechh--
Confidence 4566677788889988888865432 333 34445556666666543221
Q ss_pred HHhhhcCCHHHHHHHHHHHHHHHHhCCC-cEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCC
Q 018252 229 SKSNINCSIEDSLVRYRAVAHAAKVLSI-PVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT 299 (359)
Q Consensus 229 ~~~n~~~t~~e~l~~i~~~i~~Ak~~G~-~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT 299 (359)
.++.+.++++..++.|. .+.. .+| |....+.+ +.+.+.|+|.+...|+
T Consensus 82 -----------~~~~~~~~i~~L~~~g~~~i~v----~vG----G~~~~~~~----~~l~~~G~d~v~~~~~ 130 (161)
T 2yxb_A 82 -----------HLHLMKRLMAKLRELGADDIPV----VLG----GTIPIPDL----EPLRSLGIREIFLPGT 130 (161)
T ss_dssp -----------HHHHHHHHHHHHHHTTCTTSCE----EEE----ECCCHHHH----HHHHHTTCCEEECTTC
T ss_pred -----------hHHHHHHHHHHHHhcCCCCCEE----EEe----CCCchhcH----HHHHHCCCcEEECCCC
Confidence 13445667777777764 2221 122 23333332 3467899998887775
No 365
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=83.18 E-value=4.8 Score=38.81 Aligned_cols=177 Identities=14% Similarity=0.065 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCEEEEe----ccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCCh----------------------
Q 018252 151 VELIRRLVSSGLPVVEAT----SFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNL---------------------- 204 (359)
Q Consensus 151 ~~ia~~L~~aGv~~IEvG----~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~---------------------- 204 (359)
.+.++.+.++|++.||+. ++........-.+.+++.+.+++ .++++..+.++.
T Consensus 36 ~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~-~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~ 114 (387)
T 1bxb_A 36 VYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDE-TGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYA 114 (387)
T ss_dssp HHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHH-HTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHH-hCCEEEEEecCCCCCccccCCCCCCCCHHHHHHH
Q ss_pred -----HhHHHHHHcCCCEEEEecC--CchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCC--CCCCCC
Q 018252 205 -----KGFEAAIAAGAKEVAIFAS--ASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP--VEGAIP 275 (359)
Q Consensus 205 -----~gie~a~~aGv~~V~i~~s--~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~--~~~r~~ 275 (359)
+.++.|.+.|++.|.+..+ ..+...........+...+.+..+.++|++.|..++..|..--..+ ...-.+
T Consensus 115 i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~lE~~~~~~~~~~~~~t 194 (387)
T 1bxb_A 115 LRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFAT 194 (387)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCS
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCCCccCCC
Q ss_pred HHHHHHHHHHHHHCCcCE-EEEcCCCCCCcH--HHHHHHHHHHHHhCCCceEEEEeCCCCC
Q 018252 276 PSKVAYVAKELHDMGCFE-ISLGDTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYG 333 (359)
Q Consensus 276 ~e~l~~~a~~l~~~Gad~-I~L~DT~G~~~P--~~v~~lv~~l~~~~p~~~L~~H~HNd~G 333 (359)
++.+.+++ .+.+... +.++==+|.+.. ..+.+.++.+.. .+....+|.+|..+
T Consensus 195 ~~~~~~ll---~~v~~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~--~~~i~~vHl~D~~~ 250 (387)
T 1bxb_A 195 VGSMLAFI---HTLDRPERFGLNPEFAHETMAGLNFVHAVAQALD--AGKLFHIDLNDQRM 250 (387)
T ss_dssp HHHHHHHH---TTSSSGGGEEECCBHHHHHHTTCCHHHHHHHHHH--TTCBCCEECCBCCS
T ss_pred HHHHHHHH---HHcCCccceEEEEecCcccccCCCHHHHHHHhcc--CCcEEEEEeCCCCC
No 366
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=83.03 E-value=4 Score=36.29 Aligned_cols=65 Identities=12% Similarity=0.085 Sum_probs=48.0
Q ss_pred HHHHHHHHCCcCEEEEcCCCCCCcH--HHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 281 YVAKELHDMGCFEISLGDTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 281 ~~a~~l~~~Gad~I~L~DT~G~~~P--~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
+.++.+.++|++.|.|-=.. ...| ..+.++++.+++.+|+.++.+-.|+ ...+..+.++|+++|.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~-~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t-----~~ea~~a~~~Gad~i~ 158 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTK-RDRHDGLDIASFIRQVKEKYPNQLLMADIST-----FDEGLVAHQAGIDFVG 158 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCS-SCCTTCCCHHHHHHHHHHHCTTCEEEEECSS-----HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcccc-cCCCCCccHHHHHHHHHHhCCCCeEEEeCCC-----HHHHHHHHHcCCCEEe
Confidence 45677889999988764322 2234 3568899999998887788877764 3458899999999993
No 367
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=83.02 E-value=24 Score=31.12 Aligned_cols=128 Identities=15% Similarity=0.100 Sum_probs=75.4
Q ss_pred HhHHHHHHcCCCEEEEecCCc--hHHHHh--hhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASAS--EAFSKS--NINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVA 280 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S--~~~~~~--n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~ 280 (359)
+-++.+.++|.+.|.++.... ..|... ....+. +.+.++.+.++++|+++.. +. .+. ....+.+.
T Consensus 26 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gl~i~~-~~-~~~-----~~~~~~~~ 94 (262)
T 3p6l_A 26 EALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDA----QTQKEIKELAASKGIKIVG-TG-VYV-----AEKSSDWE 94 (262)
T ss_dssp HHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCH----HHHHHHHHHHHHTTCEEEE-EE-EEC-----CSSTTHHH
T ss_pred HHHHHHHHcCCCEEeecCCcccccccccccccccCCH----HHHHHHHHHHHHcCCeEEE-Ee-ccC-----CccHHHHH
Confidence 457788889999999875321 011000 011222 2345666777889998743 22 121 12456788
Q ss_pred HHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc--HHHHHHHHHHcCCCEE
Q 018252 281 YVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ--SLPNILISLQVSPMHA 350 (359)
Q Consensus 281 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL--AlANalaAv~AGa~~I 350 (359)
+.++.+.++|+..|.+.- | ++.+.++.+...+ .+ +.|.+|.|...-. .....+..++.+...+
T Consensus 95 ~~i~~A~~lGa~~v~~~~--~---~~~~~~l~~~a~~-~g-v~l~~En~~~~~~~~~~~~~~~ll~~~~~~~ 159 (262)
T 3p6l_A 95 KMFKFAKAMDLEFITCEP--A---LSDWDLVEKLSKQ-YN-IKISVHNHPQPSDYWKPENLLKAISGRSQSL 159 (262)
T ss_dssp HHHHHHHHTTCSEEEECC--C---GGGHHHHHHHHHH-HT-CEEEEECCSSSSSSSSHHHHHHHHTTSCTTE
T ss_pred HHHHHHHHcCCCEEEecC--C---HHHHHHHHHHHHH-hC-CEEEEEeCCCccccCCHHHHHHHHHhCCCce
Confidence 899999999999999862 2 4556665554433 34 7899999976432 2344455555443333
No 368
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=82.93 E-value=19 Score=37.01 Aligned_cols=128 Identities=20% Similarity=0.162 Sum_probs=79.5
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhh----hcCCCeEEEE-eCChHhHHHHHHcCCCEEEEec-
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR----DLEGARLPVL-TPNLKGFEAAIAAGAKEVAIFA- 222 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~----~~~~~~l~~l-~~n~~gie~a~~aGv~~V~i~~- 222 (359)
+-.+-++.|.++|++.|-+=.- + ...+.+++.++ ..|++.+.+- +-+.++.+..+++|+|-|.+-+
T Consensus 281 d~~eR~~aLv~AGvD~iviD~a-h-------Ghs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiG 352 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSS-Q-------GNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMG 352 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCS-C-------CCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSS
T ss_pred cHHHHHHHHHhcCCcEEEEecc-c-------cccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCC
Confidence 4577889999999999977431 1 11122333333 3467666443 3466888889999999998854
Q ss_pred CCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC
Q 018252 223 SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298 (359)
Q Consensus 223 s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~D 298 (359)
|-|---.+...|..+. .+..+.++.++|++.|+.|.+ |++-..+-+ +++ +..+||+.|.|.-
T Consensus 353 pGSiCtTr~v~GvG~P-Q~tAi~~~a~~a~~~~vpvIA---------DGGI~~sGD---i~K-AlaaGAd~VMlGs 414 (556)
T 4af0_A 353 SGSICITQEVMAVGRP-QGTAVYAVAEFASRFGIPCIA---------DGGIGNIGH---IAK-ALALGASAVMMGG 414 (556)
T ss_dssp CSTTBCCTTTCCSCCC-HHHHHHHHHHHHGGGTCCEEE---------ESCCCSHHH---HHH-HHHTTCSEEEEST
T ss_pred CCcccccccccCCCCc-HHHHHHHHHHHHHHcCCCEEe---------cCCcCcchH---HHH-HhhcCCCEEEEch
Confidence 2211111222333333 356778888999999998732 455544444 555 4458999998865
No 369
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=82.89 E-value=2.5 Score=40.23 Aligned_cols=94 Identities=14% Similarity=-0.013 Sum_probs=61.8
Q ss_pred eeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcH------HHHHHHHHHHHHhCCCc----eEEEEeCCCC
Q 018252 263 SCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTP------GTVVPMLEAVMAVVPVE----KLAVHLHDTY 332 (359)
Q Consensus 263 s~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P------~~v~~lv~~l~~~~p~~----~L~~H~HNd~ 332 (359)
+++.|.|.+ ..+.+.-+.-++.+.+.||++|-+.=-.|.+.- ..+.+-++++++..++. +|+.-.=++.
T Consensus 87 ~tVigFP~G-~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~~ 165 (297)
T 4eiv_A 87 CAAVNFPEG-TGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGG 165 (297)
T ss_dssp EEEESTTTC-CCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCCH
T ss_pred EEEecCCCC-CCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCcH
Confidence 445677754 555665555666777889999999888887554 45566666777665432 2222222333
Q ss_pred CcHHHHHHHHHHcCCCEEeceeeec
Q 018252 333 GQSLPNILISLQVSPMHAKPCFTFA 357 (359)
Q Consensus 333 GLAlANalaAv~AGa~~ID~tl~~~ 357 (359)
-+=..-+..|+++|||.|-+|--|.
T Consensus 166 e~i~~A~~ia~~AGADFVKTSTGf~ 190 (297)
T 4eiv_A 166 DIISRAAVAALEGGADFLQTSSGLG 190 (297)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSS
T ss_pred HHHHHHHHHHHHhCCCEEEcCCCCC
Confidence 3223567889999999999998775
No 370
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=82.87 E-value=11 Score=34.66 Aligned_cols=120 Identities=9% Similarity=0.003 Sum_probs=70.3
Q ss_pred CccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEe-CC
Q 018252 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-PN 203 (359)
Q Consensus 125 ~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~-~n 203 (359)
.++=|.=-|+||-.+. .+ -.+.++.+.++|++.||+......+ +.-.+.+++.+.+++ .++++.++. +.
T Consensus 13 ~~~g~~~~s~~~~~~~----~~---~~~~l~~~a~~G~~~VEl~~~~~~~--~~~~~~~~~~~~l~~-~GL~v~~~~~~~ 82 (303)
T 3l23_A 13 KEIGLQIYSLSQELYK----GD---VAANLRKVKDMGYSKLELAGYGKGA--IGGVPMMDFKKMAED-AGLKIISSHVNP 82 (303)
T ss_dssp CCCEEEGGGGGGGGGS----SC---HHHHHHHHHHTTCCEEEECCEETTE--ETTEEHHHHHHHHHH-TTCEEEEEECCC
T ss_pred CceEEEEEEchhhhcc----CC---HHHHHHHHHHcCCCEEEeccccCcc--cCCCCHHHHHHHHHH-cCCeEEEEeccc
Confidence 3456666678875432 23 3456777888999999997532110 111356777666654 455554332 11
Q ss_pred ---------------------h---H----hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCC
Q 018252 204 ---------------------L---K----GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS 255 (359)
Q Consensus 204 ---------------------~---~----gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G 255 (359)
. + -++.|.+.|++.|.+... ...... ...+...+.+.++.++|+++|
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~-~~~~~~----~~~~~~~~~l~~l~~~a~~~G 157 (303)
T 3l23_A 83 VDTSISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMM-PTITTH----DEAKLVCDIFNQASDVIKAEG 157 (303)
T ss_dssp BCTTCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEECSC-CCCCSH----HHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccCcccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEECCC-CCCCCH----HHHHHHHHHHHHHHHHHHHCC
Confidence 1 1 234455679999887421 110000 113456778899999999999
Q ss_pred Cc--EE
Q 018252 256 IP--VR 259 (359)
Q Consensus 256 ~~--V~ 259 (359)
++ +.
T Consensus 158 v~~~l~ 163 (303)
T 3l23_A 158 IATGFG 163 (303)
T ss_dssp CTTCEE
T ss_pred CcceEE
Confidence 98 74
No 371
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=82.77 E-value=3.8 Score=38.78 Aligned_cols=62 Identities=16% Similarity=0.067 Sum_probs=49.6
Q ss_pred HHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 284 KELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 284 ~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
+++.++|+|.|.| |+ +.|+.+.++++.++..+|.++|..=+ |.-..|+.+-.++||+.|-++
T Consensus 211 ~~A~~aGaD~I~l-d~---~~~~~l~~~v~~l~~~~~~~~I~ASG----GIt~~ni~~~~~aGaD~i~vG 272 (299)
T 2jbm_A 211 VQAAEAGADLVLL-DN---FKPEELHPTATVLKAQFPSVAVEASG----GITLDNLPQFCGPHIDVISMG 272 (299)
T ss_dssp HHHHHTTCSEEEE-ES---CCHHHHHHHHHHHHHHCTTSEEEEES----SCCTTTHHHHCCTTCCEEECT
T ss_pred HHHHHcCCCEEEE-CC---CCHHHHHHHHHHhhccCCCeeEEEEC----CCCHHHHHHHHHCCCCEEEEC
Confidence 3444689999997 76 56999999999888888888887765 566678888889999998764
No 372
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=82.69 E-value=4.1 Score=41.03 Aligned_cols=70 Identities=11% Similarity=0.014 Sum_probs=52.7
Q ss_pred HHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEecee
Q 018252 279 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 279 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl 354 (359)
..+.++.+.++|++.|.|-=+. ..|....++++.+++.+|++++....= ....-+..+.++||+.|+++.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~--G~~~~~~~~i~~i~~~~~~~pvi~~~v----~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQ--GNSVYQIAMVHYIKQKYPHLQVIGGNV----VTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC--CCSHHHHHHHHHHHHHCTTCEEEEEEE----CSHHHHHHHHHHTCSEEEECS
T ss_pred hHHHHHHHHHcCCCEEEeeccC--CcchhHHHHHHHHHHhCCCCceEeccc----chHHHHHHHHHcCCCEEEECC
Confidence 4567788899999999883333 356777899999999997777765311 335668889999999998743
No 373
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=82.67 E-value=23 Score=32.75 Aligned_cols=80 Identities=8% Similarity=-0.040 Sum_probs=46.9
Q ss_pred hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCc---EEEEEeeeecCCCCCC--CCH----
Q 018252 206 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP---VRGYVSCVVGCPVEGA--IPP---- 276 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~---V~~~is~~fg~~~~~r--~~~---- 276 (359)
-++.+.++|.+.|.+.......+. .+..-..+.++.+.++++|++ +.. +. .+ .+.... .++
T Consensus 36 ~l~~~~~~G~~~vEl~~~~~~~~~-------~~~~~~~~~~l~~~l~~~gL~~~~i~~-~~-~~-~~~~~l~~~d~~~r~ 105 (335)
T 2qw5_A 36 HIKKLQRFGYSGFEFPIAPGLPEN-------YAQDLENYTNLRHYLDSEGLENVKIST-NV-GA-TRTFDPSSNYPEQRQ 105 (335)
T ss_dssp HHHHHHHTTCCEEEEECCCCCGGG-------HHHHHHHHHHHHHHHHHTTCTTCEEEE-EC-CC-CSSSCTTCSSHHHHH
T ss_pred HHHHHHHhCCCEEEEecCCCcccc-------cccchHHHHHHHHHHHHCCCCcceeEE-Ee-cc-CCCCCCCCCCHHHHH
Confidence 467777889999988754222110 111123455667778889999 743 11 11 111111 122
Q ss_pred ---HHHHHHHHHHHHCCcCEEE
Q 018252 277 ---SKVAYVAKELHDMGCFEIS 295 (359)
Q Consensus 277 ---e~l~~~a~~l~~~Gad~I~ 295 (359)
+++.+.++.+.++|++.|.
T Consensus 106 ~~~~~~~~~i~~A~~lG~~~v~ 127 (335)
T 2qw5_A 106 EALEYLKSRVDITAALGGEIMM 127 (335)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEe
Confidence 5677788888899999884
No 374
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=82.61 E-value=3.9 Score=41.26 Aligned_cols=68 Identities=10% Similarity=-0.027 Sum_probs=51.9
Q ss_pred HHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 279 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 279 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
..+.++++.++|+|.|.|-=+. ..+..+.++++.+++.+|++++..-. .....-+..++++||+.|.+
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~--g~~~~~~~~v~~i~~~~p~~~Vi~g~----v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAH--GHSKGVIERVRWVKQTFPDVQVIGGN----IATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSC--CSBHHHHHHHHHHHHHCTTSEEEEEE----ECSHHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHhhcccceEEecccC--CcchhHHHHHHHHHHHCCCceEEEee----eCcHHHHHHHHHcCCCEEEE
Confidence 4567888999999998875333 34678889999999999877766621 23446688999999999985
No 375
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=82.43 E-value=17 Score=35.05 Aligned_cols=102 Identities=12% Similarity=0.042 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC-E--EEEc--CCCCC----CcHHH
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF-E--ISLG--DTIGV----GTPGT 307 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad-~--I~L~--DT~G~----~~P~~ 307 (359)
.+..++++++..+ +..+..+.++|. | .+++.+.+.++.+.++|++ . |++. -+-|. ..|+.
T Consensus 112 ~~~~~~~l~~~~~--~~~~~pvivsI~---g------~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~ 180 (345)
T 3oix_A 112 INYYLDYVTELQK--QPDSKNHFLSLV---G------MSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFET 180 (345)
T ss_dssp HHHHHHHHHHHHH--STTCCCCEEEEC---C------SSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHH
T ss_pred HHHHHHHHHHHhh--ccCCCCEEEEec---C------CCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHH
Confidence 4555555544321 234556655552 2 4789999999999988876 4 4443 23232 36899
Q ss_pred HHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 308 VVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 308 v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
+.++++++++... +||.+-.--++ --..-+.++-.+|++.|+
T Consensus 181 l~~il~av~~~~~-~PV~vKi~p~~-~~~~~a~~~~~aga~~i~ 222 (345)
T 3oix_A 181 TDQILSEVFTYFT-KPLGIKLPPYF-DIVHFDQAAAIFNXYPLT 222 (345)
T ss_dssp HHHHHHHHTTTCC-SCEEEEECCCC-CHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHhC-CCeEEEECCCC-CHHHHHHHHHHhCCCceE
Confidence 9999999998764 56766555443 123334455566666554
No 376
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=82.26 E-value=19 Score=33.02 Aligned_cols=162 Identities=15% Similarity=0.038 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeE--EEEeCChHhHHHHHHcCCCEEEEecCCc
Q 018252 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARL--PVLTPNLKGFEAAIAAGAKEVAIFASAS 225 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l--~~l~~n~~gie~a~~aGv~~V~i~~s~S 225 (359)
.+-.++++...+.|...|-+-- .++++. ...+. +..+++.-++.+ --++.+..+++.+.++|++.|.+....
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt--~~~~f~--G~~~~-l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~- 138 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLT--EPHRFG--GSLLD-LKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVAL- 138 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEC--CCSSSC--CCHHH-HHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHH-
T ss_pred CCHHHHHHHHHHcCCCEEEEec--chhhhc--cCHHH-HHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccc-
Confidence 4667899999999999998721 111111 12232 344443222222 123446668899999999999996531
Q ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC----CCC
Q 018252 226 EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD----TIG 301 (359)
Q Consensus 226 ~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~D----T~G 301 (359)
. + +.++++++.++.+|+.+.+.+ ++.+++ +.+.++|++.|.+.- |.+
T Consensus 139 --l----------~--~~l~~l~~~a~~lGl~~lvev-----------~~~~E~----~~a~~~gad~IGvn~~~l~~~~ 189 (254)
T 1vc4_A 139 --L----------G--ELTGAYLEEARRLGLEALVEV-----------HTEREL----EIALEAGAEVLGINNRDLATLH 189 (254)
T ss_dssp --H----------G--GGHHHHHHHHHHHTCEEEEEE-----------CSHHHH----HHHHHHTCSEEEEESBCTTTCC
T ss_pred --h----------H--HHHHHHHHHHHHCCCeEEEEE-----------CCHHHH----HHHHHcCCCEEEEccccCcCCC
Confidence 0 1 346678888889999874322 245543 356667888766532 222
Q ss_pred CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEE
Q 018252 302 VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHA 350 (359)
Q Consensus 302 ~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~I 350 (359)
. .++.+.++...+....+++++-. --|.. ..++....+ |++.|
T Consensus 190 ~-dl~~~~~L~~~i~~~~~~~~vIA----egGI~s~~dv~~l~~-Ga~gv 233 (254)
T 1vc4_A 190 I-NLETAPRLGRLARKRGFGGVLVA----ESGYSRKEELKALEG-LFDAV 233 (254)
T ss_dssp B-CTTHHHHHHHHHHHTTCCSEEEE----ESCCCSHHHHHTTTT-TCSEE
T ss_pred C-CHHHHHHHHHhCccccCCCeEEE----EcCCCCHHHHHHHHc-CCCEE
Confidence 2 23455555555543111222222 23554 566666666 87765
No 377
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=82.26 E-value=19 Score=32.70 Aligned_cols=161 Identities=14% Similarity=0.109 Sum_probs=0.0
Q ss_pred hCCCCEEEEec-----cCCCCCcCCCCCHHHHHHHhh---hcCCCeEEEEeCChH---------------hHHHHHHcCC
Q 018252 159 SSGLPVVEATS-----FVSPKWVPQLADARDVMEAVR---DLEGARLPVLTPNLK---------------GFEAAIAAGA 215 (359)
Q Consensus 159 ~aGv~~IEvG~-----fvspk~vPq~~D~~ev~~~l~---~~~~~~l~~l~~n~~---------------gie~a~~aGv 215 (359)
+.|.++||+-. ...|. ..+++.++ +..++.+.+++|... |++.+.++|+
T Consensus 19 ~~GAdRIELc~~L~~GGlTPS--------~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~Ga 90 (224)
T 2bdq_A 19 KAIISRVELCDNLAVGGTTPS--------YGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELES 90 (224)
T ss_dssp TTTCCEEEEEBCGGGTCBCCC--------HHHHHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HcCCCEEEEcCCcccCCcCCC--------HHHHHHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCC
Q ss_pred CEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEE
Q 018252 216 KEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEIS 295 (359)
Q Consensus 216 ~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~ 295 (359)
+.|-+-+=..+-... .+.++++++.|+ |+.+.+.-. |. ........+..+.+.++|+++|-
T Consensus 91 dGvV~G~Lt~dg~iD----------~~~~~~Li~~a~--~~~vTFHRA--FD-----~~~~~d~~~ale~L~~lGv~rIL 151 (224)
T 2bdq_A 91 DALVLGILTSNNHID----------TEAIEQLLPATQ--GLPLVFHMA--FD-----VIPKSDQKKSIDQLVALGFTRIL 151 (224)
T ss_dssp SEEEECCBCTTSSBC----------HHHHHHHHHHHT--TCCEEECGG--GG-----GSCTTTHHHHHHHHHHTTCCEEE
T ss_pred CEEEEeeECCCCCcC----------HHHHHHHHHHhC--CCeEEEECc--hh-----ccCCcCHHHHHHHHHHcCCCEEE
Q ss_pred EcCCCCCCcH---HHHHHHHHHHHHhC-CCceEEEEeCCCCCcHHHHHHHHH-HcCCCEEece
Q 018252 296 LGDTIGVGTP---GTVVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILISL-QVSPMHAKPC 353 (359)
Q Consensus 296 L~DT~G~~~P---~~v~~lv~~l~~~~-p~~~L~~H~HNd~GLAlANalaAv-~AGa~~ID~t 353 (359)
|.|.... .+=.+.++.+.+.. +.+.|-.=+ |.-..|+-.-+ +.|++.+|+|
T Consensus 152 ---TSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~Gg----GV~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 152 ---LHGSSNGEPIIENIKHIKALVEYANNRIEIMVGG----GVTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp ---ECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEECS----SCCTTTHHHHHHHHTCCEEEET
T ss_pred ---CCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeCC----CCCHHHHHHHHHhhCCCEEccc
No 378
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=82.25 E-value=18 Score=31.62 Aligned_cols=114 Identities=14% Similarity=0.020 Sum_probs=66.1
Q ss_pred CeEEEEeCC------hHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC
Q 018252 195 ARLPVLTPN------LKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC 268 (359)
Q Consensus 195 ~~l~~l~~n------~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~ 268 (359)
.++..+++. ..+++.+++.|++.|++-.. +.+.++.. ++++..++.+.... .+. + .
T Consensus 17 ~~l~~It~~~~~~~~l~~~~~~~~~G~~~v~lr~~----------~~~~~~~~----~~~~~l~~~~~~~~-~l~--v-~ 78 (221)
T 1yad_A 17 MELHAITDDSKPVEELARIIITIQNEVDFIHIRER----------SKSAADIL----KLLDLIFEGGIDKR-KLV--M-N 78 (221)
T ss_dssp CEEEEECCSCSCHHHHHHHHHHHGGGCSEEEECCT----------TSCHHHHH----HHHHHHHHTTCCGG-GEE--E-E
T ss_pred ccEEEEECCCcCcchHHHHHHHHHCCCCEEEEccC----------CCCHHHHH----HHHHHHHHhcCcCC-eEE--E-e
Confidence 456666663 24577788889998877321 23344333 34444444443211 111 1 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCC
Q 018252 269 PVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPM 348 (359)
Q Consensus 269 ~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~ 348 (359)
+.++.+.++|+|.|.|.... ..+.. +++..++..+++-+|+ ...+..|.++|+|
T Consensus 79 ------------~~~~~a~~~gad~v~l~~~~--~~~~~-------~~~~~~~~~ig~sv~t-----~~~~~~a~~~gaD 132 (221)
T 1yad_A 79 ------------GRVDIALFSTIHRVQLPSGS--FSPKQ-------IRARFPHLHIGRSVHS-----LEEAVQAEKEDAD 132 (221)
T ss_dssp ------------SCHHHHHTTTCCEEEECTTS--CCHHH-------HHHHCTTCEEEEEECS-----HHHHHHHHHTTCS
T ss_pred ------------ChHHHHHHcCCCEEEeCCCc--cCHHH-------HHHHCCCCEEEEEcCC-----HHHHHHHHhCCCC
Confidence 11255778999999996432 23322 3333345678887774 4567889999999
Q ss_pred EEec
Q 018252 349 HAKP 352 (359)
Q Consensus 349 ~ID~ 352 (359)
+|=.
T Consensus 133 ~i~~ 136 (221)
T 1yad_A 133 YVLF 136 (221)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9854
No 379
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=82.25 E-value=4.2 Score=38.83 Aligned_cols=76 Identities=14% Similarity=0.215 Sum_probs=49.0
Q ss_pred CCCCC-CHHHHHHHHHHHHHCCcCEEEEcC-CC--CCCc---HHHHH---HHHHHHHHhCCCceEEEEeCCCCCcHHHHH
Q 018252 270 VEGAI-PPSKVAYVAKELHDMGCFEISLGD-TI--GVGT---PGTVV---PMLEAVMAVVPVEKLAVHLHDTYGQSLPNI 339 (359)
Q Consensus 270 ~~~r~-~~e~l~~~a~~l~~~Gad~I~L~D-T~--G~~~---P~~v~---~lv~~l~~~~p~~~L~~H~HNd~GLAlANa 339 (359)
|+|++ +++..++.++++.+.||+.|-+.= +. |... -+++. .+|+++++.. +++|.+ ||+--.+ +
T Consensus 25 dgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~vpiSI---DT~~~~V--a 98 (314)
T 2vef_A 25 DGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-DVLISI---DTWKSQV--A 98 (314)
T ss_dssp -----CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-CCEEEE---ECSCHHH--H
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CceEEE---eCCCHHH--H
Confidence 45665 789999999999999999988764 32 2211 14444 4455566665 468887 5555444 5
Q ss_pred HHHHHcCCCEEe
Q 018252 340 LISLQVSPMHAK 351 (359)
Q Consensus 340 laAv~AGa~~ID 351 (359)
.+|+++|+++|+
T Consensus 99 ~aAl~aGa~iIN 110 (314)
T 2vef_A 99 EAALAAGADLVN 110 (314)
T ss_dssp HHHHHTTCCEEE
T ss_pred HHHHHcCCCEEE
Confidence 689999999996
No 380
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=82.21 E-value=8.8 Score=36.52 Aligned_cols=117 Identities=19% Similarity=0.127 Sum_probs=66.9
Q ss_pred hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEee--eecCCC------CCCCC--
Q 018252 206 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSC--VVGCPV------EGAIP-- 275 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~--~fg~~~------~~r~~-- 275 (359)
.++...++|+..|++.+-..+. -+. ..++.+.++++.|+++|++|...+=. .|..|- +-..+
T Consensus 32 ~~~ilk~~G~N~VRi~~w~~P~-----~g~---~~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~~ 103 (332)
T 1hjs_A 32 LENILAANGVNTVRQRVWVNPA-----DGN---YNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDID 103 (332)
T ss_dssp HHHHHHHTTCCEEEEEECSSCT-----TCT---TSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHH
T ss_pred HHHHHHHCCCCEEEEeeeeCCC-----CCc---CCHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccchH
Confidence 4555667899988886533332 011 12567788999999999998665410 111110 00011
Q ss_pred ------HHHHHHHHHHHHHCCc--CEEEEcC--CCCCC-------cHHHHHHHHH----HHHHhC--CCceEEEEeCC
Q 018252 276 ------PSKVAYVAKELHDMGC--FEISLGD--TIGVG-------TPGTVVPMLE----AVMAVV--PVEKLAVHLHD 330 (359)
Q Consensus 276 ------~e~l~~~a~~l~~~Ga--d~I~L~D--T~G~~-------~P~~v~~lv~----~l~~~~--p~~~L~~H~HN 330 (359)
.++..++++++.+.|+ +.|.+.- +.|.+ ....+.++++ ++|+.. |..++-+|..+
T Consensus 104 ~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~ 181 (332)
T 1hjs_A 104 NLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDN 181 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCC
Confidence 3455667777777774 5554432 12222 3355555554 466666 77788888876
No 381
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=82.17 E-value=11 Score=34.50 Aligned_cols=114 Identities=15% Similarity=0.059 Sum_probs=73.1
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhc-CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNIN-CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 283 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~-~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a 283 (359)
+-++++++.|++.|++-.+..+.- ...| .+..+.++.++.+.+.++++|..+.. + + +. ++
T Consensus 47 ~~~~~al~~Gv~~vqlR~K~~~~~--~~~~~l~~~~~~~~a~~l~~l~~~~~~~liI-------n-d----~~----~l- 107 (243)
T 3o63_A 47 QFAEAALAGGVDIIQLRDKGSPGE--LRFGPLQARDELAACEILADAAHRYGALFAV-------N-D----RA----DI- 107 (243)
T ss_dssp HHHHHHHHTTCSEEEECCTTCHHH--HHHCSCCHHHHHHHHHHHHHHHHHTTCEEEE-------E-S----CH----HH-
T ss_pred HHHHHHHHCCCCEEEEccCCCCcc--ccccCCCHHHHHHHHHHHHHHHHhhCCEEEE-------e-C----HH----HH-
Confidence 457889999999999965532200 0001 34567777888899999999887521 1 0 11 12
Q ss_pred HHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhC-CCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 284 KELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 284 ~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~-p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
+.++|+|-|-|.... +.+.+ +++.+ ++..|++=+|+- .-+..|.+.|+|+|=..
T Consensus 108 --A~~~gAdGVHLg~~d--l~~~~-------~r~~~~~~~~iG~S~ht~-----~Ea~~A~~~GaDyI~vg 162 (243)
T 3o63_A 108 --ARAAGADVLHLGQRD--LPVNV-------ARQILAPDTLIGRSTHDP-----DQVAAAAAGDADYFCVG 162 (243)
T ss_dssp --HHHHTCSEEEECTTS--SCHHH-------HHHHSCTTCEEEEEECSH-----HHHHHHHHSSCSEEEEC
T ss_pred --HHHhCCCEEEecCCc--CCHHH-------HHHhhCCCCEEEEeCCCH-----HHHHHHhhCCCCEEEEc
Confidence 445689988886542 22333 33433 466889988873 45678889999999654
No 382
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=82.07 E-value=11 Score=31.13 Aligned_cols=100 Identities=17% Similarity=0.200 Sum_probs=56.0
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCChHhHHHHHHcCCCEEEEecCCchHHH
Q 018252 150 KVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFS 229 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~ 229 (359)
+.-+...|...|++.|..|.++++ +++ ++.+.+.+++.|.++......
T Consensus 20 ~~~v~~~l~~~G~~Vi~lG~~~p~---------e~~---------------------v~~a~~~~~d~v~lS~~~~~~-- 67 (137)
T 1ccw_A 20 NKILDHAFTNAGFNVVNIGVLSPQ---------ELF---------------------IKAAIETKADAILVSSLYGQG-- 67 (137)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEECH---------HHH---------------------HHHHHHHTCSEEEEEECSSTH--
T ss_pred HHHHHHHHHHCCCEEEECCCCCCH---------HHH---------------------HHHHHhcCCCEEEEEecCcCc--
Confidence 556667788899999988876543 344 344555566666665543221
Q ss_pred HhhhcCCHHHHHHHHHHHHHHHHhCCC-cEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC
Q 018252 230 KSNINCSIEDSLVRYRAVAHAAKVLSI-PVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD 298 (359)
Q Consensus 230 ~~n~~~t~~e~l~~i~~~i~~Ak~~G~-~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~D 298 (359)
+..+.++++..++.|. .+...+. |.+. ++++.+.+..+.+.++|+|.+.-..
T Consensus 68 -----------~~~~~~~i~~l~~~g~~~i~v~vG---G~~~---~~~~~~~~~~~~~~~~G~d~~~~~g 120 (137)
T 1ccw_A 68 -----------EIDCKGLRQKCDEAGLEGILLYVG---GNIV---VGKQHWPDVEKRFKDMGYDRVYAPG 120 (137)
T ss_dssp -----------HHHHTTHHHHHHHTTCTTCEEEEE---ESCS---SSSCCHHHHHHHHHHTTCSEECCTT
T ss_pred -----------HHHHHHHHHHHHhcCCCCCEEEEE---CCCc---CchHhhhhhHHHHHHCCCCEEECCC
Confidence 2234455666666665 2332221 2211 2223344456678889998876433
No 383
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=82.07 E-value=8.7 Score=37.27 Aligned_cols=39 Identities=15% Similarity=0.156 Sum_probs=31.9
Q ss_pred HHHHHHHHHCCcCEEE--------E--cCCCCCCcHHHHHHHHHHHHHh
Q 018252 280 AYVAKELHDMGCFEIS--------L--GDTIGVGTPGTVVPMLEAVMAV 318 (359)
Q Consensus 280 ~~~a~~l~~~Gad~I~--------L--~DT~G~~~P~~v~~lv~~l~~~ 318 (359)
..++.++..+||+.|- + +|..=.++|.++.+|++.++..
T Consensus 219 ~~~~~AAvAlGA~iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~ 267 (349)
T 2wqp_A 219 NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHAL 267 (349)
T ss_dssp SHHHHHHHHHTCCEEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHH
Confidence 4677888889998664 4 7888889999999999999863
No 384
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=82.01 E-value=17 Score=34.35 Aligned_cols=134 Identities=13% Similarity=0.050 Sum_probs=79.5
Q ss_pred HHHHHHcCCCEEEEe-cCCchHHHHhhh-cCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIF-ASASEAFSKSNI-NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 207 ie~a~~aGv~~V~i~-~s~S~~~~~~n~-~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
...+-++|++-|.+. .+.+-.+-.-.. -.|.++.+..++.+.+. ..+.|.+.+- || ++ +++.+.+.++
T Consensus 32 A~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~---~~~PviaD~d--~G--yg---~~~~v~~~v~ 101 (295)
T 1s2w_A 32 ARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDA---SDVPILLDAD--TG--YG---NFNNARRLVR 101 (295)
T ss_dssp HHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHT---CSSCEEEECC--SS--CS---SHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhc---CCCCEEecCC--CC--CC---CHHHHHHHHH
Confidence 334445688888775 222211111111 13566666666655543 3456644443 33 22 5788999999
Q ss_pred HHHHCCcCEEEEcCCC--------C----CCcH-HHHHHHHHHHHHhC--CCceEEEEeCCC-C----CcHHHHHHHHHH
Q 018252 285 ELHDMGCFEISLGDTI--------G----VGTP-GTVVPMLEAVMAVV--PVEKLAVHLHDT-Y----GQSLPNILISLQ 344 (359)
Q Consensus 285 ~l~~~Gad~I~L~DT~--------G----~~~P-~~v~~lv~~l~~~~--p~~~L~~H~HNd-~----GLAlANalaAv~ 344 (359)
++.++|+..|.|-|.. | ...| .+..+.|+++++.. ++..|-.-.-.. . --++.-+.+-.+
T Consensus 102 ~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~e 181 (295)
T 1s2w_A 102 KLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRN 181 (295)
T ss_dssp HHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHHHHHH
Confidence 9999999999999997 3 2344 45667777777654 444444444332 1 246778889999
Q ss_pred cCCCEE
Q 018252 345 VSPMHA 350 (359)
Q Consensus 345 AGa~~I 350 (359)
|||+.|
T Consensus 182 AGAd~i 187 (295)
T 1s2w_A 182 AGADAI 187 (295)
T ss_dssp TTCSEE
T ss_pred cCCCEE
Confidence 999976
No 385
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=81.99 E-value=3.6 Score=39.30 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=65.1
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCE-EEEcC-CCCCCcHHHHHHHHHHHHHhCCC
Q 018252 244 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFE-ISLGD-TIGVGTPGTVVPMLEAVMAVVPV 321 (359)
Q Consensus 244 i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~-I~L~D-T~G~~~P~~v~~lv~~l~~~~p~ 321 (359)
.+++++.|++.|+-|- +|.+ .+.+.+..+++.+.+.+... |.+.- +..++...-+..++..+.+....
T Consensus 5 ~~~ll~~A~~~~yAV~-----AfNv-----~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~ 74 (307)
T 3n9r_A 5 GNEILLKAHKEGYGVG-----AFNF-----VNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPH 74 (307)
T ss_dssp HHHHHHHHHHHTCCEE-----EEEC-----SSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCceEE-----EEee-----CCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCC
Confidence 4678889999999773 3432 47788999999998888664 44432 22333345566777777666455
Q ss_pred ceEEEEeCCCCCcHHHHHHHHHHcCCCE
Q 018252 322 EKLAVHLHDTYGQSLPNILISLQVSPMH 349 (359)
Q Consensus 322 ~~L~~H~HNd~GLAlANalaAv~AGa~~ 349 (359)
+|+.+|. |-|....-+..|+++|.+-
T Consensus 75 VPValHL--DHg~~~e~~~~ai~~GFtS 100 (307)
T 3n9r_A 75 IPVALHL--DHGTTFESCEKAVKAGFTS 100 (307)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHHTCSE
T ss_pred CcEEEEC--CCCCCHHHHHHHHHhCCCc
Confidence 7777765 4455678999999999864
No 386
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=81.97 E-value=4.6 Score=38.63 Aligned_cols=71 Identities=11% Similarity=0.050 Sum_probs=51.4
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCC-----------CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHH
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILIS 342 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaA 342 (359)
..++.+.+.+++..+.|++.|.+.-+-| ..+|+++.++++..++. ++++.+|++.+ .....|
T Consensus 172 ~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~-----~~i~~a 244 (426)
T 2r8c_A 172 DGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGR--GTYVLAHAYTP-----AAIARA 244 (426)
T ss_dssp CSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHT--TCCEEEEECSH-----HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHc--CCEEEEEeCCh-----HHHHHH
Confidence 3567777888888888888776654433 56788888888877764 36788898843 456778
Q ss_pred HHcCCCEEe
Q 018252 343 LQVSPMHAK 351 (359)
Q Consensus 343 v~AGa~~ID 351 (359)
+++|++.|+
T Consensus 245 l~~G~~~i~ 253 (426)
T 2r8c_A 245 VRCGVRTIE 253 (426)
T ss_dssp HHTTCSEEE
T ss_pred HHcCCCEEe
Confidence 889998765
No 387
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=81.78 E-value=26 Score=32.85 Aligned_cols=183 Identities=16% Similarity=0.119 Sum_probs=104.1
Q ss_pred HHHHHHHhCCCCEEEEecc-CC--CCCcCC--CCCHHHHHHHhhhc-CCCeEEEEe--C----Ch----HhHHHHHHcCC
Q 018252 152 ELIRRLVSSGLPVVEATSF-VS--PKWVPQ--LADARDVMEAVRDL-EGARLPVLT--P----NL----KGFEAAIAAGA 215 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG~f-vs--pk~vPq--~~D~~ev~~~l~~~-~~~~l~~l~--~----n~----~gie~a~~aGv 215 (359)
--++.+.++|++.|=+|.. ++ ..-.|. .-..++++..++.+ ..+.+.+++ + +. +-+.+..++|+
T Consensus 32 ~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa 111 (287)
T 3b8i_A 32 MSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGI 111 (287)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 3456778899999999853 11 011122 23567777766643 233333343 3 21 22445566899
Q ss_pred CEEEEecCCch---HHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 216 KEVAIFASASE---AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 216 ~~V~i~~s~S~---~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
.-|++-....+ .|...+ =.+.++..++++.+++....-|+.+.+--- +.....+..++-++++.++|||
T Consensus 112 ~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRtd-------aa~~gl~~ai~Ra~ay~eAGAd 183 (287)
T 3b8i_A 112 AALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARVDPALTIIARTN-------AELIDVDAVIQRTLAYQEAGAD 183 (287)
T ss_dssp SEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEEE-------TTTSCHHHHHHHHHHHHHTTCS
T ss_pred eEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEech-------hhhcCHHHHHHHHHHHHHcCCC
Confidence 99999765432 111112 236677777777776665544555544332 1123568899999999999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 293 EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 293 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
.|.+. |+-+++.+.++.+.+. .|- -+--... -..-+.-.--++|+++|-.
T Consensus 184 ~i~~e---~~~~~~~~~~i~~~~~--~P~---ii~~~g~--~~~~~~~eL~~lGv~~v~~ 233 (287)
T 3b8i_A 184 GICLV---GVRDFAHLEAIAEHLH--IPL---MLVTYGN--PQLRDDARLARLGVRVVVN 233 (287)
T ss_dssp EEEEE---CCCSHHHHHHHHTTCC--SCE---EEECTTC--GGGCCHHHHHHTTEEEEEC
T ss_pred EEEec---CCCCHHHHHHHHHhCC--CCE---EEeCCCC--CCCCCHHHHHHcCCcEEEE
Confidence 99987 4445666666655442 342 2322111 1122344566777777644
No 388
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=81.76 E-value=4.1 Score=37.43 Aligned_cols=150 Identities=20% Similarity=0.181 Sum_probs=96.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh---------------------cCCCeEEEEe
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD---------------------LEGARLPVLT 201 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~---------------------~~~~~l~~l~ 201 (359)
..-+.++-++-.+...+.....|-+|..... | ..+.-|.+..+. ..++-+-+|+
T Consensus 46 ny~tve~av~~mk~y~~~~~~avSVGLGaGD---p--~Q~~~Va~Ia~~~~P~HVNQvFtgag~t~~~L~~~~T~VNaLv 120 (249)
T 3m0z_A 46 NYPDVASAVVDMRDYAKLIDNALSVGLGAGD---P--NQSAMVSEISRQVQPQHVNQVFTGVATSRALLGQNETVVNGLV 120 (249)
T ss_dssp GSSSHHHHHHHHHHHHHHTTTCEEEECSSSC---G--GGHHHHHHHHHHHCCSEECCBGGGHHHHHHHHTSSCSEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCceEEecCCCC---H--HHHHHHHHHHHhcCCCcccccccchHHHHHhccCCCeEEEEEE
Confidence 3456788888888888888878999874321 1 111112222111 1124444554
Q ss_pred -CCh--------------------HhHHHHH----HcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCC
Q 018252 202 -PNL--------------------KGFEAAI----AAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI 256 (359)
Q Consensus 202 -~n~--------------------~gie~a~----~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~ 256 (359)
|.- -.++.|+ +.|...|.+|-=. |. ..+++++.+++.|.++|+
T Consensus 121 sPTG~~G~VkIsTGp~Ss~~~~~~V~vetAiaml~dmG~~SvKffPm~---------Gl---~~l~E~~avAka~a~~g~ 188 (249)
T 3m0z_A 121 SPTGTPGMVKISTGPLSSGAADGIVPLETAIALLKDMGGSSIKYFPMG---------GL---KHRAEFEAVAKACAAHDF 188 (249)
T ss_dssp BCCSSTTEEECCCSTTGGGSSCCEEEHHHHHHHHHHTTCCEEEECCCT---------TT---TTHHHHHHHHHHHHHTTC
T ss_pred cCCCccceEEeccCccccCCCCceeeHHHHHHHHHHcCCCeeeEeecC---------Cc---ccHHHHHHHHHHHHHcCc
Confidence 210 1245554 4799999987411 11 236677888899999998
Q ss_pred cEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEE-------EcCCCCCCcHHHHHHHHHHHHHhC
Q 018252 257 PVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEIS-------LGDTIGVGTPGTVVPMLEAVMAVV 319 (359)
Q Consensus 257 ~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~-------L~DT~G~~~P~~v~~lv~~l~~~~ 319 (359)
- +. -.|-.+.+.+.++.+.+.++|+..|. +--..|...|++|++++..+++.+
T Consensus 189 ~----lE------PTGGIdl~N~~~I~~i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 189 W----LE------PTGGIDLENYSEILKIALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEMTKQLV 248 (249)
T ss_dssp E----EE------EBSSCCTTTHHHHHHHHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHHHHHHHC
T ss_pred e----EC------CCCCccHhhHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHhh
Confidence 2 22 24568889999999999999987431 334679999999999999988754
No 389
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=81.74 E-value=3.2 Score=38.68 Aligned_cols=74 Identities=9% Similarity=0.094 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEc--CCCCCCcH--HHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCE
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLG--DTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMH 349 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~--DT~G~~~P--~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ 349 (359)
.+.+...++++.+.++|++.|-+. .+ +-..| ....++++.+++. +++++..|.-| ...+..|+++|++.
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~-~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n-----~~~i~~a~~~G~~~ 95 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVS-PKWVPQLADSREVMAGIRRA-DGVRYSVLVPN-----MKGYEAAAAAHADE 95 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSC-TTTCGGGTTHHHHHHHSCCC-SSSEEEEECSS-----HHHHHHHHHTTCSE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcC-ccccccccCHHHHHHHHHhC-CCCEEEEEeCC-----HHHHHHHHHCCCCE
Confidence 678899999999999999977664 21 22224 1455666666554 67889888833 57778899999998
Q ss_pred Eecee
Q 018252 350 AKPCF 354 (359)
Q Consensus 350 ID~tl 354 (359)
|...+
T Consensus 96 V~i~~ 100 (295)
T 1ydn_A 96 IAVFI 100 (295)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87654
No 390
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=81.72 E-value=4.8 Score=36.42 Aligned_cols=70 Identities=9% Similarity=0.016 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
.+++.+.++++++.+.|++.|-+-.. +| ...+.++.+++.+|++.++... -+ -.-.+-.|+++||+.|++
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k----~~-~~~~~i~~l~~~~~~l~vgaGt--vl--~~d~~~~A~~aGAd~v~~ 95 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFR----SE-AAADAIRLLRANRPDFLIAAGT--VL--TAEQVVLAKSSGADFVVT 95 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHHHHHCTTCEEEEES--CC--SHHHHHHHHHHTCSEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc----Cc-hHHHHHHHHHHhCcCcEEeeCc--Ee--eHHHHHHHHHCCCCEEEE
Confidence 47788899999999999998888754 23 2356888889999876666643 22 237888999999999975
No 391
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=81.70 E-value=3.2 Score=40.57 Aligned_cols=25 Identities=32% Similarity=0.395 Sum_probs=16.0
Q ss_pred CCH-HHHHHHHHHHHhCCCCEEEEec
Q 018252 145 VPT-GVKVELIRRLVSSGLPVVEATS 169 (359)
Q Consensus 145 ~~~-~~k~~ia~~L~~aGv~~IEvG~ 169 (359)
+++ +.-+++......+|+=+.|...
T Consensus 38 ~pt~~~~~~yY~~rA~~GLIite~~~ 63 (379)
T 3aty_A 38 VPRTESMLKYYEDRASAGLIIAEATM 63 (379)
T ss_dssp CBCHHHHHHHHHTTTTSSEEEEEEEE
T ss_pred ccCHHHHHHHHHHHhCCCeEEECcee
Confidence 455 7777777776666665556654
No 392
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=81.66 E-value=27 Score=33.76 Aligned_cols=96 Identities=8% Similarity=-0.026 Sum_probs=61.1
Q ss_pred hCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE----cCCCCC---CcHHHHHHHHHHHHHh---C---
Q 018252 253 VLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL----GDTIGV---GTPGTVVPMLEAVMAV---V--- 319 (359)
Q Consensus 253 ~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L----~DT~G~---~~P~~v~~lv~~l~~~---~--- 319 (359)
..+..+.++|. ++.+ +..+++++.+.++.+.+ ++|.|.| +-+-|. ..|+.+.++++++++. +
T Consensus 144 ~~~~pv~vnig---gn~~-t~~~~~dy~~~~~~~~~-~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~ 218 (367)
T 3zwt_A 144 EDGLPLGVNLG---KNKT-SVDAAEDYAEGVRVLGP-LADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRV 218 (367)
T ss_dssp HTTCCEEEEEC---CCTT-CSCHHHHHHHHHHHHGG-GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGG
T ss_pred cCCceEEEEEe---cCCC-CCcCHHHHHHHHHHHhh-hCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhcccc
Confidence 34666766552 3222 23467888888888875 4664443 234443 3488899999999864 1
Q ss_pred CCceEEEEeCCCCC--cHHHHHHHHHHcCCCEEece
Q 018252 320 PVEKLAVHLHDTYG--QSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 320 p~~~L~~H~HNd~G--LAlANalaAv~AGa~~ID~t 353 (359)
..+||.+-..-++. -...-+.++.++||+.|.++
T Consensus 219 ~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 219 HRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp GCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 23677777765554 33455677789999988754
No 393
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=81.47 E-value=2 Score=38.37 Aligned_cols=70 Identities=13% Similarity=-0.017 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCCCCCcHH-HHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 278 KVAYVAKELHDMGCFEISLGDTIGVGTPG-TVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~-~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
...++++.+.+.|++.|.+.|.-|...+. .. ++++.+++.+. +++.+|.--.. ...+..++++||+.|..
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~-ipv~v~ggi~~---~~~~~~~l~~Gad~V~l 102 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLD-VQVELSGGIRD---DESLAAALATGCARVNV 102 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCS-SEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcC-CcEEEECCCCC---HHHHHHHHHcCCCEEEE
Confidence 35667888999999999998754433222 22 88888888764 68888754332 34577888999998864
No 394
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=81.38 E-value=3.2 Score=42.02 Aligned_cols=68 Identities=12% Similarity=0.036 Sum_probs=51.3
Q ss_pred HHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 280 AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 280 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
.+.++++.++|+|.|.|-=+.| .+..+.++++.+++.+|+++|.+-. .....-+..++++||+.|.+.
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g--~~~~~~~~i~~ir~~~p~~~Vi~g~----v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG--HSEGVLQRIRETRAAYPHLEIIGGN----VATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTCCEEEEE----ECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhccCceEEeccccc--cchHHHHHHHHHHHHCCCceEEEcc----cCcHHHHHHHHHhCCCEEEEC
Confidence 5678888899999887754433 4577889999999999887776621 233466788999999999853
No 395
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=81.37 E-value=14 Score=36.88 Aligned_cols=145 Identities=12% Similarity=0.005 Sum_probs=88.4
Q ss_pred HHHHHHcCCCEEEEecCCch----HHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEE-eeeecC------CC-----
Q 018252 207 FEAAIAAGAKEVAIFASASE----AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYV-SCVVGC------PV----- 270 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~----~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~i-s~~fg~------~~----- 270 (359)
++..+++|+--|+|-..+.. .|...+.=.+.++.+++++.+...++..|.++.+.- +.+... .|
T Consensus 173 vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d~~d~~ 252 (439)
T 3i4e_A 173 MKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDIDDNDKP 252 (439)
T ss_dssp HHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCTTTGG
T ss_pred HHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccccccccch
Confidence 56677899999999876532 111111113688999999988888877776532111 111110 00
Q ss_pred ------------CCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCC----c
Q 018252 271 ------------EGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG----Q 334 (359)
Q Consensus 271 ------------~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~G----L 334 (359)
..+...+..++-+++..+ |||.|.+- .|.-+++++.++.++++..+|...+.+-+--.+. +
T Consensus 253 fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E--~~~~~~eei~~f~~~v~~~~P~~~l~~~~sPsfnw~~~~ 329 (439)
T 3i4e_A 253 YLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCE--TGKPDLEYAKKFAEAIHKQFPGKLLSYNCSPSFNWKKNL 329 (439)
T ss_dssp GEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEEC--CSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHS
T ss_pred hhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEec--CCCCCHHHHHHHHHHhcccCCceEEeeCCCCCCcCcccC
Confidence 002346777777887777 99999871 2567899999999999988897556543322222 1
Q ss_pred H---HHH-HHHHHHcCCCEEecee
Q 018252 335 S---LPN-ILISLQVSPMHAKPCF 354 (359)
Q Consensus 335 A---lAN-alaAv~AGa~~ID~tl 354 (359)
. +++ .-.--++|+.++=.++
T Consensus 330 ~~~~~~~f~~eL~~lGv~~v~~~l 353 (439)
T 3i4e_A 330 DDATIAKFQKELGAMGYKFQFITL 353 (439)
T ss_dssp CHHHHHTHHHHHHHHTCCEEEETT
T ss_pred CHHHHHHHHHHHHHcCCeEEEeCh
Confidence 1 111 2244457888875544
No 396
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=81.16 E-value=36 Score=31.87 Aligned_cols=77 Identities=5% Similarity=-0.117 Sum_probs=50.7
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCC----------------CCcH---HHHHHHHHHHHHhCC-CceEEEEeCCCCC
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIG----------------VGTP---GTVVPMLEAVMAVVP-VEKLAVHLHDTYG 333 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G----------------~~~P---~~v~~lv~~l~~~~p-~~~L~~H~HNd~G 333 (359)
.+.+.+.++++.+.++|+|-|.+..|.. ...| ....++++.+++.++ +++|-.=+--..
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~- 300 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDS- 300 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCS-
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCC-
Confidence 4677889999999999999999887631 1111 123367777887764 455544332222
Q ss_pred cHHHHHHHHHHcCCCEEece
Q 018252 334 QSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 334 LAlANalaAv~AGa~~ID~t 353 (359)
-.-+.+++++||+.|-..
T Consensus 301 --~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 301 --VIAAREKIAAGASLVQIY 318 (336)
T ss_dssp --HHHHHHHHHHTCSEEEES
T ss_pred --HHHHHHHHHCCCCEEEee
Confidence 245667777899998654
No 397
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=81.04 E-value=17 Score=35.28 Aligned_cols=99 Identities=15% Similarity=0.150 Sum_probs=65.3
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-+-+.-++.|.+ -.|.+|-.+-++.+++.+.. .++|.+.+ +..+.++.+++++.+
T Consensus 86 v~~li~~Gv~Gl~v~GTTGE~~-----~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---------g~~st~eai~la~~A 150 (360)
T 4dpp_A 86 VNIQIQNGAEGVIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFGG-SIKVIGNT---------GSNSTREAIHATEQG 150 (360)
T ss_dssp HHHHHHTTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-TSEEEEEC---------CCSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEecccccChh-----hCCHHHHHHHHHHHHHHhCC-CCeEEEec---------CCCCHHHHHHHHHHH
Confidence 4556678999988887777754 34667766666666666542 24543222 234677888899999
Q ss_pred HHCCcCEEEEc-CCCCCCcHHHHHHHHHHHHHhCC
Q 018252 287 HDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVP 320 (359)
Q Consensus 287 ~~~Gad~I~L~-DT~G~~~P~~v~~lv~~l~~~~p 320 (359)
.++|+|.+-+. =-..-.+++.+.+.++++.+..|
T Consensus 151 ~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a~P 185 (360)
T 4dpp_A 151 FAVGMHAALHINPYYGKTSIEGLIAHFQSVLHMGP 185 (360)
T ss_dssp HHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGGSC
T ss_pred HHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99999865443 34445567777777777776654
No 398
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=81.00 E-value=39 Score=32.18 Aligned_cols=183 Identities=12% Similarity=0.029 Sum_probs=101.4
Q ss_pred HHHHHhCCCCEEEEecc-C------CCCCcCCCCCHHHHHHHhhhc----CCCeEEEEeCC----h----HhHHHHHHcC
Q 018252 154 IRRLVSSGLPVVEATSF-V------SPKWVPQLADARDVMEAVRDL----EGARLPVLTPN----L----KGFEAAIAAG 214 (359)
Q Consensus 154 a~~L~~aGv~~IEvG~f-v------spk~vPq~~D~~ev~~~l~~~----~~~~l~~l~~n----~----~gie~a~~aG 214 (359)
++.+.++|++.|=+|.. + .|+.. .-..++++..++.+ +++-+++=.+. . +-+.+.+++|
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD~~--~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aG 129 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPDFG--LLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAG 129 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCSSS--CSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCCCC--CCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHcC
Confidence 45777899999999862 1 23211 23556666666542 24444433332 1 2345566789
Q ss_pred CCEEEEecCCchHHHHhhhc---CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCc
Q 018252 215 AKEVAIFASASEAFSKSNIN---CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGC 291 (359)
Q Consensus 215 v~~V~i~~s~S~~~~~~n~~---~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Ga 291 (359)
+.-|++-....+.-.-+.-| .+.++..++++.+++...+-++.+.+--- ++. ....+..++-++++.++||
T Consensus 130 aagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtd-a~a-----~~gl~~ai~Ra~Ay~eAGA 203 (318)
T 1zlp_A 130 AKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTD-ARA-----PHGLEEGIRRANLYKEAGA 203 (318)
T ss_dssp CCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEEC-THH-----HHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeH-Hhh-----hcCHHHHHHHHHHHHHcCC
Confidence 99999976543110000001 35678888888887777655666643221 000 0123577888888899999
Q ss_pred CEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc-HHHHHHHHHHcCCCEEece
Q 018252 292 FEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 292 d~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL-AlANalaAv~AGa~~ID~t 353 (359)
|.|.+. |+-+++++.++.+.+ + +|+-+-.-. +|. ..-..-.--++|+++|-..
T Consensus 204 d~i~~e---~~~~~e~~~~i~~~l----~-~P~lan~~~-~g~~~~~~~~eL~~lGv~~v~~~ 257 (318)
T 1zlp_A 204 DATFVE---APANVDELKEVSAKT----K-GLRIANMIE-GGKTPLHTPEEFKEMGFHLIAHS 257 (318)
T ss_dssp SEEEEC---CCCSHHHHHHHHHHS----C-SEEEEEECT-TSSSCCCCHHHHHHHTCCEEEEC
T ss_pred CEEEEc---CCCCHHHHHHHHHhc----C-CCEEEEecc-CCCCCCCCHHHHHHcCCeEEEEc
Confidence 999986 344556666665554 3 354332221 111 1112345566787777543
No 399
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=80.92 E-value=20 Score=32.52 Aligned_cols=139 Identities=11% Similarity=0.043 Sum_probs=76.5
Q ss_pred cCCCCccEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEE
Q 018252 121 KGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL 200 (359)
Q Consensus 121 ~~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l 200 (359)
.+++.++-|.-.++++ ..+.+ +.++.+.++|++.||+.......+.+.-.+.+++.+.+++ .++++.++
T Consensus 19 ~~~~~klgi~~~~~~~-------~~~~~---~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~ 87 (296)
T 2g0w_A 19 NLKKCPITISSYTLGT-------EVSFP---KRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDE-HNMKVTEV 87 (296)
T ss_dssp ---CCCEEECGGGGTT-------TSCHH---HHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHH-TTCEEEEE
T ss_pred CcCCCCceeechhcCC-------CCCHH---HHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHH-cCCceEee
Confidence 3455667777777765 13444 4556677899999999862100000111355666665553 34555443
Q ss_pred eC-------Ch----------HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEe
Q 018252 201 TP-------NL----------KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVS 263 (359)
Q Consensus 201 ~~-------n~----------~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is 263 (359)
.+ +. +.++.|.+.|++.|.+. +.. +.+.+...+.+.++.++| .|+++ .+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~g-~~~--------~~~~~~~~~~l~~l~~~a--~Gv~l--~lE 154 (296)
T 2g0w_A 88 EYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCG-LLE--------KIPEEQIIVALGELCDRA--EELII--GLE 154 (296)
T ss_dssp ECBCCCSSTTTCCHHHHHHHHHHHHHHHHHTCCEEEEC-CCS--------CCCHHHHHHHHHHHHHHH--TTSEE--EEE
T ss_pred hhhhccccCChHHHHHHHHHHHHHHHHHHcCCCEEEEc-CCC--------CCCHHHHHHHHHHHHHHh--cCCEE--EEE
Confidence 32 11 23445566799988762 211 113567778888888888 77755 333
Q ss_pred eeecCCCCCCCCHHHHHHHHHHH
Q 018252 264 CVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 264 ~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
.. +...-.+++.+.++++++
T Consensus 155 ~~---~~~~~~~~~~~~~l~~~v 174 (296)
T 2g0w_A 155 FM---PYSGVADLQAAWRVAEAC 174 (296)
T ss_dssp CC---TTSSSCSHHHHHHHHHHH
T ss_pred ec---CCCCCCCHHHHHHHHHHh
Confidence 11 111235677777777665
No 400
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=80.91 E-value=7.7 Score=34.15 Aligned_cols=72 Identities=15% Similarity=0.077 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCCCCCc-HHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 278 KVAYVAKELHDMGCFEISLGDTIGVGT-PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT~G~~~-P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
...++++.+.+.|++.|.+.|..+... .....++++.+++.+. +++.+|.--. ....+..++++||+.|...
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~g~i~---~~~~~~~~~~~Gad~V~i~ 106 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS-IPVLVGGGVR---SLEDATTLFRAGADKVSVN 106 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS-SCEEEESSCC---SHHHHHHHHHHTCSEEEES
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC-CCEEEECCCC---CHHHHHHHHHcCCCEEEEC
Confidence 567788899999999888887765432 2234567788888764 5777654221 1345678888999998743
No 401
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=80.80 E-value=34 Score=31.28 Aligned_cols=75 Identities=16% Similarity=0.072 Sum_probs=40.2
Q ss_pred HHHHHHcCCCEEEEecCCchHHH--------HhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFS--------KSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 278 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~--------~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~ 278 (359)
++.|.+.|++.|.+......... ........+...+.++++.+.|++.|+++. +... +.....+++.
T Consensus 117 i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lEn~---~~~~~~~~~~ 191 (340)
T 2zds_A 117 ARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFA--HEVH---PSEIAYDYWT 191 (340)
T ss_dssp HHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEE--EECC---TTSSCCSHHH
T ss_pred HHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEE--EEcC---CCcccCCHHH
Confidence 44555679999888643211000 000001134556677888889999998653 3321 1112347777
Q ss_pred HHHHHHHH
Q 018252 279 VAYVAKEL 286 (359)
Q Consensus 279 l~~~a~~l 286 (359)
+.++++.+
T Consensus 192 ~~~ll~~v 199 (340)
T 2zds_A 192 THRALEAV 199 (340)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 66666544
No 402
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=80.80 E-value=37 Score=31.77 Aligned_cols=137 Identities=15% Similarity=0.067 Sum_probs=83.3
Q ss_pred CCeEEEEeC-ChHhHHHHHHcCCCEEEEecCCchHHHHhhh------cCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeee
Q 018252 194 GARLPVLTP-NLKGFEAAIAAGAKEVAIFASASEAFSKSNI------NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV 266 (359)
Q Consensus 194 ~~~l~~l~~-n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~------~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~f 266 (359)
+-.++.++. +.--...+-++|++.|.+-.+. . ...+ ..|.++.+...+.+.+.++. ..|.+.
T Consensus 16 g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl--~--~~~lG~~dt~~vTldemi~h~~aV~r~~~~--~~vvaD----- 84 (275)
T 1o66_A 16 GEKIAMLTAYESSFAALMDDAGVEMLLVGDSL--G--MAVQGRKSTLPVSLRDMCYHTECVARGAKN--AMIVSD----- 84 (275)
T ss_dssp TCCEEEEECCSHHHHHHHHHTTCCEEEECTTH--H--HHTTCCSSSTTCCHHHHHHHHHHHHHHCSS--SEEEEE-----
T ss_pred CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHH--H--HHHcCCCCCCCCCHHHHHHHHHHHHhhCCC--CeEEEE-----
Confidence 344555555 3333445556899987542222 1 1222 34688887777666554321 123222
Q ss_pred cCCCCCC-CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeC------CCC-------
Q 018252 267 GCPVEGA-IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLH------DTY------- 332 (359)
Q Consensus 267 g~~~~~r-~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~H------Nd~------- 332 (359)
.|+.+- .+++...+-+.++.++|++.|.|-|. .++.+.|+++.++ ++|+--|.= |.+
T Consensus 85 -~pfgsy~~s~~~a~~na~rl~kaGa~aVklEdg------~e~~~~I~al~~a--gIpV~gHiGLtPQs~~~~ggf~v~g 155 (275)
T 1o66_A 85 -LPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGG------VWMAETTEFLQMR--GIPVCAHIGLTPQSVFAFGGYKVQG 155 (275)
T ss_dssp -CCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECS------GGGHHHHHHHHHT--TCCEEEEEESCGGGTTC--------
T ss_pred -CCCCCccCCHHHHHHHHHHHHHcCCcEEEECCc------HHHHHHHHHHHHc--CCCeEeeeccCceeecccCCeEEEe
Confidence 344333 57999999999999999999999997 3677777777764 234443332 211
Q ss_pred -----CcHHHHHHHHHHcCCCEE
Q 018252 333 -----GQSLPNILISLQVSPMHA 350 (359)
Q Consensus 333 -----GLAlANalaAv~AGa~~I 350 (359)
--++.-+.+-.+|||+.|
T Consensus 156 rt~~a~~~i~rA~a~~eAGA~~i 178 (275)
T 1o66_A 156 RGGKAQALLNDAKAHDDAGAAVV 178 (275)
T ss_dssp ---CHHHHHHHHHHHHHTTCSEE
T ss_pred ChHHHHHHHHHHHHHHHcCCcEE
Confidence 235667888889999876
No 403
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=80.79 E-value=3.9 Score=38.00 Aligned_cols=155 Identities=14% Similarity=0.142 Sum_probs=96.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEeccCC-C---------------CCcCCC-CCHHHHHHHhhhcCCCeEEEEe-CC-
Q 018252 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVS-P---------------KWVPQL-ADARDVMEAVRDLEGARLPVLT-PN- 203 (359)
Q Consensus 143 ~~~~~~~k~~ia~~L~~aGv~~IEvG~fvs-p---------------k~vPq~-~D~~ev~~~l~~~~~~~l~~l~-~n- 203 (359)
..-+.++-++-.+...+.....|-||.... | ..|.|. .-+..-+.++. ...+-+-+|+ |.
T Consensus 68 ny~tve~AV~~mk~y~~~~~~avSVGLGaGDP~Q~~~Va~IA~~~~P~HVNQVFtgag~trg~L~-~~~T~VNaLVSPTG 146 (275)
T 3m6y_A 68 DYPTVEEAVTAMKAYGKEIDDAVSIGLGAGDNRQAAVVAEIAKHYPGSHINQVFPSVGATRANLG-EKDSWINSLVSPTG 146 (275)
T ss_dssp GSSSHHHHHHHHHHHHHHTTTCEEEECCTTCGGGHHHHHHHTTTCCCSEECCBGGGHHHHHHHHT-TCCCEEEEEEBCCS
T ss_pred CCCCHHHHHHHHHHHHHhCCCceEEecCCCCHHHHHHHHHHHHhcCCCcccccccchHHHHhhcC-CCccEEEEEEcCCC
Confidence 445678888888888888877799986331 1 111111 11111111221 1123334443 21
Q ss_pred --------------------hHhHHHHH----HcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEE
Q 018252 204 --------------------LKGFEAAI----AAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVR 259 (359)
Q Consensus 204 --------------------~~gie~a~----~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~ 259 (359)
.-.+|.|+ +.|...|.+|.=. |. ..+++++.+++.|.+.|+-
T Consensus 147 ~~G~VkISTGp~Sas~~~~~~V~vetAiaml~dmG~~SvKffPM~---------Gl---~~leEl~avAkAca~~g~~-- 212 (275)
T 3m6y_A 147 KVGYVNISTGPISAAGEEKAIVPIKTAIALVRDMGGNSLKYFPMK---------GL---AHEEEYRAVAKACAEEGFA-- 212 (275)
T ss_dssp STTEEECCCSTTGGGSSSCCEEEHHHHHHHHHHHTCCEEEECCCT---------TT---TTHHHHHHHHHHHHHHTCE--
T ss_pred CcceEEeccCCCccccCCCceeeHHHHHHHHHHcCCCeeeEeecC---------Cc---ccHHHHHHHHHHHHHcCce--
Confidence 01245544 4699999987411 11 2356778888888889982
Q ss_pred EEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEE----E---EcCCCCCCcHHHHHHHHHHHHHhCC
Q 018252 260 GYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEI----S---LGDTIGVGTPGTVVPMLEAVMAVVP 320 (359)
Q Consensus 260 ~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I----~---L~DT~G~~~P~~v~~lv~~l~~~~p 320 (359)
+. -.|-++.+.+.++.+.+.++|+..| + +--..|...|++|++++..+++.+.
T Consensus 213 --lE------PTGGIdl~Nf~~I~~i~l~aGv~~viPHIYsSIIDk~TG~TrpedV~~ll~~~K~l~~ 272 (275)
T 3m6y_A 213 --LE------PTGGIDKENFETIVRIALEANVEQVIPHVYSSIIDKETGNTKVEAVRELLAVVKKLVD 272 (275)
T ss_dssp --EE------EBSSCCTTTHHHHHHHHHHTTCSCBCCEECGGGBCTTTCCBCHHHHHHHHHHHHHHHT
T ss_pred --EC------CCCCccHhHHHHHHHHHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 22 2456888999999999999998743 2 3346799999999999999987653
No 404
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=80.74 E-value=8.3 Score=34.77 Aligned_cols=166 Identities=14% Similarity=0.106 Sum_probs=82.5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEec--cCCCCCcCCCCCHHHHHHHhhhcCCCeEEE---E--eCCh--HhHHHHHHcCC
Q 018252 145 VPTGVKVELIRRLVSSGLPVVEATS--FVSPKWVPQLADARDVMEAVRDLEGARLPV---L--TPNL--KGFEAAIAAGA 215 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~aGv~~IEvG~--fvspk~vPq~~D~~ev~~~l~~~~~~~l~~---l--~~n~--~gie~a~~aGv 215 (359)
.+.++-+++++.+.. .++.+++|. |.+ . . .++++.+++..+..+.. + +||. ..++.+.++|+
T Consensus 22 ~~~~~a~~~v~~~~~-~v~~~Kvg~~lf~~--~-----G-~~~v~~l~~~~g~~v~lD~Kl~DipnTv~~~~~~~~~~ga 92 (228)
T 3m47_A 22 MNRDDALRVTGEVRE-YIDTVKIGYPLVLS--E-----G-MDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGA 92 (228)
T ss_dssp CSHHHHHHHHHTTTT-TCSEEEEEHHHHHH--H-----C-THHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCC-cccEEEEcHHHHHh--c-----C-HHHHHHHHhcCCCeEEEEEeecccHhHHHHHHHHHHhCCC
Confidence 345555555554321 278999985 321 0 1 12344444422332211 1 2332 35677788999
Q ss_pred CEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEE
Q 018252 216 KEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEIS 295 (359)
Q Consensus 216 ~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~ 295 (359)
+.|.+...... +.++.+++.+++.|..| .+-+..+++.....-.+.+..+++...+.|++-+.
T Consensus 93 d~vtvh~~~G~---------------~~l~~~~~~~~~~g~~v--~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV 155 (228)
T 3m47_A 93 DAIIVHGFPGA---------------DSVRACLNVAEEMGREV--FLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYV 155 (228)
T ss_dssp SEEEEESTTCH---------------HHHHHHHHHHHHHTCEE--EEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEeccCCH---------------HHHHHHHHHHHhcCCCe--EEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 99888653211 23445666667767654 22223444322111124566788888899998765
Q ss_pred EcCCCCCCcHHHHHHHHHHHHHhCCC-ceEEEEeCCCCC--cHHHHHHHHHHcCCCEE
Q 018252 296 LGDTIGVGTPGTVVPMLEAVMAVVPV-EKLAVHLHDTYG--QSLPNILISLQVSPMHA 350 (359)
Q Consensus 296 L~DT~G~~~P~~v~~lv~~l~~~~p~-~~L~~H~HNd~G--LAlANalaAv~AGa~~I 350 (359)
. |...|+++.+ +++..|. ..+ + +-| ..-++. .++++|++++
T Consensus 156 ~----~at~~~e~~~----ir~~~~~~~~i-v----~PGI~~~g~~p-~~~~aGad~i 199 (228)
T 3m47_A 156 G----PSTRPERLSR----LREIIGQDSFL-I----SPGVGAQGGDP-GETLRFADAI 199 (228)
T ss_dssp C----CSSCHHHHHH----HHHHHCSSSEE-E----ECC----------CGGGTCSEE
T ss_pred E----CCCChHHHHH----HHHhcCCCCEE-E----ecCcCcCCCCH-hHHHcCCCEE
Confidence 3 3335666654 4443332 111 0 011 111245 8899999975
No 405
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=80.46 E-value=7.9 Score=36.75 Aligned_cols=142 Identities=14% Similarity=0.096 Sum_probs=70.0
Q ss_pred HHHHHHHHHhCCCCEEEEec----cCCCCCcCCCC--CHHHHHHHhhhc-CCCeEEEEeCCh-HhHHHHHHcCCCEEEEe
Q 018252 150 KVELIRRLVSSGLPVVEATS----FVSPKWVPQLA--DARDVMEAVRDL-EGARLPVLTPNL-KGFEAAIAAGAKEVAIF 221 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~----fvspk~vPq~~--D~~ev~~~l~~~-~~~~l~~l~~n~-~gie~a~~aGv~~V~i~ 221 (359)
.+++++.+.++|++.|-+.= +.+|+....+. -...+++.++.. +++.+..+|.+. .-++...++|++.+.+-
T Consensus 195 ~~~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~c~g~~~~l~~l~~~g~d~~~~d 274 (353)
T 1j93_A 195 MAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSGGLLERLPLTGVDVVSLD 274 (353)
T ss_dssp HHHHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEECSSCTTTGGGGGGGCCSEEECC
T ss_pred HHHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEECCChHHHHHHHHhcCCCEEEeC
Confidence 34566677789999987752 23332100000 001223333322 256566666532 34555567888877652
Q ss_pred cCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCC--cEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHC-CcCEEEEcC
Q 018252 222 ASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI--PVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDM-GCFEISLGD 298 (359)
Q Consensus 222 ~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~--~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~-Gad~I~L~D 298 (359)
- +.+.+++ .+..|- .+.|+|... .. ..+++.+.+-++++.+. |...+.+.-
T Consensus 275 ~-----------~~d~~~~----------~~~~g~~~~l~Gnldp~--~l---~~~~e~i~~~v~~~l~~~~~~g~I~~~ 328 (353)
T 1j93_A 275 W-----------TVDMADG----------RRRLGPNVAIQGNVDPG--VL---FGSKEFITNRINDTVKKAGKGKHILNL 328 (353)
T ss_dssp T-----------TSCHHHH----------HHHTCSSSEEECCBCGG--GG---GSCHHHHHHHHHHHHHHHCSSSEEBCB
T ss_pred C-----------CCCHHHH----------HHHcCCCeEEEecCCHH--HH---cCCHHHHHHHHHHHHHHhCCCCEEEeC
Confidence 1 1112111 111333 344444321 11 23778888777777654 554455544
Q ss_pred CCCC---CcHHHHHHHHHHHHH
Q 018252 299 TIGV---GTPGTVVPMLEAVMA 317 (359)
Q Consensus 299 T~G~---~~P~~v~~lv~~l~~ 317 (359)
.-|+ ..|+.+..+++++++
T Consensus 329 g~gi~~~~~~enl~a~ve~v~~ 350 (353)
T 1j93_A 329 GHGIKVGTPEENFAHFFEIAKG 350 (353)
T ss_dssp SSCCCTTCCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHHHH
Confidence 4444 345666777776654
No 406
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=80.38 E-value=27 Score=33.41 Aligned_cols=112 Identities=12% Similarity=0.038 Sum_probs=69.4
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
+.++.+++.|++.|.+...... . +.++..++.|+.+...+ .+++ .++
T Consensus 113 ~~~~~~~~~g~~~V~~~~g~~~-----------~-------~~i~~~~~~g~~v~~~v-----------~t~~----~a~ 159 (369)
T 3bw2_A 113 AKLAVLLDDPVPVVSFHFGVPD-----------R-------EVIARLRRAGTLTLVTA-----------TTPE----EAR 159 (369)
T ss_dssp HHHHHHHHSCCSEEEEESSCCC-----------H-------HHHHHHHHTTCEEEEEE-----------SSHH----HHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCc-----------H-------HHHHHHHHCCCeEEEEC-----------CCHH----HHH
Confidence 4578888899998888543211 1 33445566788764322 2443 356
Q ss_pred HHHHCCcCEEEEcC-C----CCCCcH--------HHHHHHHHHHHHhCCCceEEEEeCCCCCc-HHHHHHHHHHcCCCEE
Q 018252 285 ELHDMGCFEISLGD-T----IGVGTP--------GTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQVSPMHA 350 (359)
Q Consensus 285 ~l~~~Gad~I~L~D-T----~G~~~P--------~~v~~lv~~l~~~~p~~~L~~H~HNd~GL-AlANalaAv~AGa~~I 350 (359)
.+.++|+|.|.+-- . .|...| ....+++..+++.+. +++-.= =|. .-.|+.+++.+||+.|
T Consensus 160 ~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~-iPViaa----GGI~~~~~~~~~l~~GAd~V 234 (369)
T 3bw2_A 160 AVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVD-IPVVAA----GGIMRGGQIAAVLAAGADAA 234 (369)
T ss_dssp HHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcC-ceEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 77889999998822 1 132211 234577788877653 454432 355 4578889999999998
Q ss_pred ecee
Q 018252 351 KPCF 354 (359)
Q Consensus 351 D~tl 354 (359)
...-
T Consensus 235 ~vGs 238 (369)
T 3bw2_A 235 QLGT 238 (369)
T ss_dssp EESH
T ss_pred EECh
Confidence 8653
No 407
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=80.38 E-value=5.8 Score=37.91 Aligned_cols=70 Identities=9% Similarity=-0.020 Sum_probs=44.0
Q ss_pred HHHHHHHHHHCCcCEEEEcCCCC-CCcHHHHHHHH----HHHHHhCC--CceEEEEeCCCCCcHHHHHHHHHHcCCCEEe
Q 018252 279 VAYVAKELHDMGCFEISLGDTIG-VGTPGTVVPML----EAVMAVVP--VEKLAVHLHDTYGQSLPNILISLQVSPMHAK 351 (359)
Q Consensus 279 l~~~a~~l~~~Gad~I~L~DT~G-~~~P~~v~~lv----~~l~~~~p--~~~L~~H~HNd~GLAlANalaAv~AGa~~ID 351 (359)
+.+.++...++|++.|.+.|+.| .+.|..+.+++ +.+.+.++ ++++-+|+..+ +. +.-.+ .+.|++.+.
T Consensus 195 ~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~-~~-~l~~l--~~~g~d~~~ 270 (359)
T 2inf_A 195 IIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGA-SH-LAGDW--HDLPLDVVG 270 (359)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTC-GG-GHHHH--HTSSCSEEE
T ss_pred HHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCc-HH-HHHHH--HHhCCCEEE
Confidence 44555666789999999999765 55677766653 22222332 36777787766 32 22222 378999876
Q ss_pred c
Q 018252 352 P 352 (359)
Q Consensus 352 ~ 352 (359)
.
T Consensus 271 ~ 271 (359)
T 2inf_A 271 L 271 (359)
T ss_dssp C
T ss_pred e
Confidence 4
No 408
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=80.00 E-value=40 Score=31.68 Aligned_cols=185 Identities=16% Similarity=0.113 Sum_probs=101.5
Q ss_pred HHHHHhCCCCEEEEecc-CC--CCCcCC--CCCHHHHHHHhhhc---CCCeEEEEeC-----Ch----HhHHHHHHcCCC
Q 018252 154 IRRLVSSGLPVVEATSF-VS--PKWVPQ--LADARDVMEAVRDL---EGARLPVLTP-----NL----KGFEAAIAAGAK 216 (359)
Q Consensus 154 a~~L~~aGv~~IEvG~f-vs--pk~vPq--~~D~~ev~~~l~~~---~~~~l~~l~~-----n~----~gie~a~~aGv~ 216 (359)
++.+.++|++.|=+|.. ++ ..-.|. .-..++++..++.+ .+..+.+=.+ +. +-+++..++|+.
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~ 109 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAA 109 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHHHcCCe
Confidence 56778899999999864 11 112232 23556666666542 2222333222 11 224455678999
Q ss_pred EEEEecCCchHHHHhhhc---CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCE
Q 018252 217 EVAIFASASEAFSKSNIN---CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFE 293 (359)
Q Consensus 217 ~V~i~~s~S~~~~~~n~~---~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~ 293 (359)
-|++-....+--.-+.-| .+.++..++++.+++.+..-++.+.+--- ++. ....+..++-++++.++|||.
T Consensus 110 gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtd-a~~-----~~gl~~ai~ra~ay~eAGAd~ 183 (295)
T 1xg4_A 110 GLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTD-ALA-----VEGLDAAIERAQAYVEAGAEM 183 (295)
T ss_dssp EEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEEC-CHH-----HHCHHHHHHHHHHHHHTTCSE
T ss_pred EEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecH-Hhh-----hcCHHHHHHHHHHHHHcCCCE
Confidence 999976543211100001 24667778887777665544555543221 000 113478888999999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc-HHHHHHHHHHcCCCEEece
Q 018252 294 ISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 294 I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL-AlANalaAv~AGa~~ID~t 353 (359)
|.+. |.-+++.+.++.+.+. .| +-+-.-. +|. ..-+.-.--+.|+++|-..
T Consensus 184 i~~e---~~~~~~~~~~i~~~~~--iP---~~~N~~~-~g~~p~~~~~eL~~~G~~~v~~~ 235 (295)
T 1xg4_A 184 LFPE---AITELAMYRQFADAVQ--VP---ILANITE-FGATPLFTTDELRSAHVAMALYP 235 (295)
T ss_dssp EEET---TCCSHHHHHHHHHHHC--SC---BEEECCS-SSSSCCCCHHHHHHTTCSEEEES
T ss_pred EEEe---CCCCHHHHHHHHHHcC--CC---EEEEecc-cCCCCCCCHHHHHHcCCCEEEEC
Confidence 9986 3445677777766663 34 3221110 111 1122345667788877543
No 409
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=79.97 E-value=4.5 Score=36.28 Aligned_cols=70 Identities=13% Similarity=0.033 Sum_probs=53.2
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
.+++.+.++++++.+.|++.|-+-... |. ..+.++.+++.+|+..++... . +-.-.+-.|+++||+.|++
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k~----~~-~~~~i~~l~~~~~~~~vgagt---v-i~~d~~~~A~~aGAd~v~~ 94 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLRT----EC-AVDAIRAIAKEVPEAIVGAGT---V-LNPQQLAEVTEAGAQFAIS 94 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESCS----TT-HHHHHHHHHHHCTTSEEEEES---C-CSHHHHHHHHHHTCSCEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC----hh-HHHHHHHHHHHCcCCEEeeCE---E-EEHHHHHHHHHcCCCEEEc
Confidence 477889999999999999988887652 32 356888888889876555532 2 3337888999999999975
No 410
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=79.89 E-value=2.5 Score=39.85 Aligned_cols=94 Identities=17% Similarity=0.084 Sum_probs=60.3
Q ss_pred eeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCc---HH---HHHHHHHHHHHhCCCce----EEEEeCCCC
Q 018252 263 SCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGT---PG---TVVPMLEAVMAVVPVEK----LAVHLHDTY 332 (359)
Q Consensus 263 s~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~---P~---~v~~lv~~l~~~~p~~~----L~~H~HNd~ 332 (359)
+.+.|.|.+ ..+.+--+.-++.+.+.||++|-+.=-+|... -. .+.+-+.++++..++.+ |+.-.=+|.
T Consensus 93 ~tVigFP~G-~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d~ 171 (281)
T 2a4a_A 93 ACVINFPYG-TDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTE 171 (281)
T ss_dssp EEEESTTTC-CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCSH
T ss_pred EEEeCCCCC-CCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCcH
Confidence 334566654 45666555666778888999999988888544 44 56677777777654322 222111333
Q ss_pred CcHHHHHHHHHHcCCCEEeceeeec
Q 018252 333 GQSLPNILISLQVSPMHAKPCFTFA 357 (359)
Q Consensus 333 GLAlANalaAv~AGa~~ID~tl~~~ 357 (359)
-.=..-+..|+++|||+|-++.-|.
T Consensus 172 e~i~~A~~ia~eaGADfVKTSTGf~ 196 (281)
T 2a4a_A 172 DLIIKTTLAVLNGNADFIKTSTGKV 196 (281)
T ss_dssp HHHHHHHHHHHTTTCSEEECCCSCS
T ss_pred HHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 2223567789999999999996553
No 411
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=79.87 E-value=6 Score=35.11 Aligned_cols=20 Identities=5% Similarity=0.066 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHCCcCEEEE
Q 018252 277 SKVAYVAKELHDMGCFEISL 296 (359)
Q Consensus 277 e~l~~~a~~l~~~Gad~I~L 296 (359)
+.+.+.++.+.++|+..|.+
T Consensus 84 ~~~~~~i~~a~~lG~~~v~~ 103 (278)
T 1i60_A 84 TEFKGMMETCKTLGVKYVVA 103 (278)
T ss_dssp HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEE
Confidence 34555555556666666655
No 412
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=79.83 E-value=11 Score=37.32 Aligned_cols=77 Identities=12% Similarity=0.066 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHCCcCEEEEc-------------------CCCCCCc----HHHHHHHHHHHHHhC-----CCceEEEEeC
Q 018252 278 KVAYVAKELHDMGCFEISLG-------------------DTIGVGT----PGTVVPMLEAVMAVV-----PVEKLAVHLH 329 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~----P~~v~~lv~~l~~~~-----p~~~L~~H~H 329 (359)
.+.+.++++.++|.|.|.|= |-.|-.. +..+.++++++++.+ ++.+|++-.-
T Consensus 171 ~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis 250 (419)
T 3l5a_A 171 QYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRAT 250 (419)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecc
Confidence 44555667778999987772 3344433 455678888888876 2456776543
Q ss_pred CC------CCcHHH----HHHHHHH-cCCCEEecee
Q 018252 330 DT------YGQSLP----NILISLQ-VSPMHAKPCF 354 (359)
Q Consensus 330 Nd------~GLAlA----NalaAv~-AGa~~ID~tl 354 (359)
-+ .|+-.. -+....+ +|+++|+++-
T Consensus 251 ~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~ 286 (419)
T 3l5a_A 251 PEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIAS 286 (419)
T ss_dssp SCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECC
T ss_pred cccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEee
Confidence 21 144333 3333445 8999999875
No 413
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=79.66 E-value=58 Score=33.35 Aligned_cols=89 Identities=13% Similarity=0.221 Sum_probs=57.4
Q ss_pred cEEEeCCC---cccCCCCCCCC-CHHHHHHHHHHHHhCC-----CCEEEEec-cCCCCCcCCCCCHHHHH---HHhhhc-
Q 018252 127 VKIVEVGP---RDGLQNEKNTV-PTGVKVELIRRLVSSG-----LPVVEATS-FVSPKWVPQLADARDVM---EAVRDL- 192 (359)
Q Consensus 127 V~I~D~TL---RDG~Q~~~~~~-~~~~k~~ia~~L~~aG-----v~~IEvG~-fvspk~vPq~~D~~ev~---~~l~~~- 192 (359)
+=|+.+|+ =||++. + +.+..++.++.+.+.| .++|+||. ...|.+.+ ....+|+. ..++.+
T Consensus 228 MGIlNvTPDSFsDGG~~----~~~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~-vs~eEEl~RvvpvI~~i~ 302 (545)
T 2bmb_A 228 MAIFNATPDSFSDGGEH----FADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQ-ASEEEEIRRSIPLIKAIR 302 (545)
T ss_dssp EEEEECSCSSTTTTTTT----TTCHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCC-CCHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCcCCCcC----cCCHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 34777776 566543 4 7899999999999999 99999996 23343322 22233432 333322
Q ss_pred -------CCCeEEEEeCChHhHHHHHHcCCCEEEE
Q 018252 193 -------EGARLPVLTPNLKGFEAAIAAGAKEVAI 220 (359)
Q Consensus 193 -------~~~~l~~l~~n~~gie~a~~aGv~~V~i 220 (359)
.++.+++=+...+-++.|+++|++.|+=
T Consensus 303 ~~~~~~~~~vpISIDT~~a~VaeaAl~aGadIIND 337 (545)
T 2bmb_A 303 ESTELPQDKVILSIDTYRSNVAKEAIKVGVDIIND 337 (545)
T ss_dssp HCSSSCGGGEEEEEECCCHHHHHHHHHTTCCEEEE
T ss_pred hhccccCCCCeEEEeCCcHHHHHHHHHcCCCEEEe
Confidence 1333333334567799999999998874
No 414
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=79.60 E-value=37 Score=31.06 Aligned_cols=155 Identities=7% Similarity=-0.059 Sum_probs=82.1
Q ss_pred CCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeCChHhHHHHHHcCCCEEEEecCCc--hHHHHhhhcCCHHH
Q 018252 162 LPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASAS--EAFSKSNINCSIED 239 (359)
Q Consensus 162 v~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~n~~gie~a~~aGv~~V~i~~s~S--~~~~~~n~~~t~~e 239 (359)
++.|-+.+...|-.. .+..++++.+++. +..+...+ |.--.+.+.+.|.+.+.+.+... +.|.+ ++.....
T Consensus 128 ~~~i~~s~gGEPll~---~~l~~li~~~~~~-g~~~~l~T-NG~~~~~l~~L~~~~v~isld~~~~~~~~~--i~~~~~~ 200 (311)
T 2z2u_A 128 PKHVAISLSGEPTLY---PYLDELIKIFHKN-GFTTFVVS-NGILTDVIEKIEPTQLYISLDAYDLDSYRR--ICGGKKE 200 (311)
T ss_dssp CCEEEECSSSCGGGS---TTHHHHHHHHHHT-TCEEEEEE-CSCCHHHHHHCCCSEEEEECCCSSTTTC------CCCHH
T ss_pred CCEEEEeCCcCccch---hhHHHHHHHHHHC-CCcEEEEC-CCCCHHHHHhCCCCEEEEEeecCCHHHHHH--HhCCccc
Confidence 456666532333211 2455666666554 55443333 32112444455888888876542 33332 2222235
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc------CCC------CCCcHHH
Q 018252 240 SLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG------DTI------GVGTPGT 307 (359)
Q Consensus 240 ~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~------DT~------G~~~P~~ 307 (359)
.++.+.+.++.+++.| .+...+. +. +.... + +.++++.+.+.|++.|.|- .+- ...+|++
T Consensus 201 ~~~~v~~~i~~l~~~g-~v~i~~~--~~-~g~n~-~---~~~~~~~~~~~~~~~i~l~~~~p~g~~~~~~~~~~~~~~~e 272 (311)
T 2z2u_A 201 YWESILNTLDILKEKK-RTCIRTT--LI-RGYND-D---ILKFVELYERADVHFIELKSYMHVGYSQKRLKKEDMLQHDE 272 (311)
T ss_dssp HHHHHHHHHHHHTTSS-SEEEEEE--EC-TTTTC-C---GGGTHHHHHHHTCSEEEEEECC------------CCCCHHH
T ss_pred hHHHHHHHHHHHHhcC-CEEEEEE--EE-CCcch-h---HHHHHHHHHHcCCCEEEEEeeEEccccccccccccCCCHHH
Confidence 6778888888888888 6654443 22 21112 3 4445555556788877641 111 3456788
Q ss_pred HHHHHHHHHHhCCCceEEEEeCCC
Q 018252 308 VVPMLEAVMAVVPVEKLAVHLHDT 331 (359)
Q Consensus 308 v~~lv~~l~~~~p~~~L~~H~HNd 331 (359)
+.++++.+.+..+-..++-|.|..
T Consensus 273 ~~~~~~~l~~~~g~~~~~~~~~~~ 296 (311)
T 2z2u_A 273 ILKLAKMLDENSSYKLIDDSEDSR 296 (311)
T ss_dssp HHHHHHHHHTSSSEEEEEEEGGGT
T ss_pred HHHHHHHHHHhcCceEEeccCcce
Confidence 899888888754322335565543
No 415
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=79.55 E-value=30 Score=36.22 Aligned_cols=117 Identities=13% Similarity=-0.031 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-------------CCC------CCCC------------HHHHHHHHHHH
Q 018252 238 EDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-------------PVE------GAIP------------PSKVAYVAKEL 286 (359)
Q Consensus 238 ~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-------------~~~------~r~~------------~e~l~~~a~~l 286 (359)
++.++.++.+++..+++|-++...|.+. |- |-+ .... .+.+.+.|+.+
T Consensus 80 ~~~~~~~~~~~~~vh~~g~~i~~Ql~h~-Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a 158 (729)
T 1o94_A 80 EGDVRNLKAMTDEVHKYGALAGVELWYG-GAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRS 158 (729)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECC-GGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHhCCCeEEEEecCC-CccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 3456667788888889999887777642 00 000 0011 35677788888
Q ss_pred HHCCcCEEEEc-------------------CCCCCCc---HHHHHHHHHHHHHhCC-CceEEEEeC-----CCCCcH---
Q 018252 287 HDMGCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVP-VEKLAVHLH-----DTYGQS--- 335 (359)
Q Consensus 287 ~~~Gad~I~L~-------------------DT~G~~~---P~~v~~lv~~l~~~~p-~~~L~~H~H-----Nd~GLA--- 335 (359)
.++|.|.|.|- |-.|... +..+.++++++++.++ +.+|++-.- +.-|+.
T Consensus 159 ~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~ 238 (729)
T 1o94_A 159 RDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEV 238 (729)
T ss_dssp HHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTT
T ss_pred HHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchH
Confidence 89999987773 3344332 4457788999999884 455666441 122332
Q ss_pred -HHHHHHHHHcCCCEEeceee
Q 018252 336 -LPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 336 -lANalaAv~AGa~~ID~tl~ 355 (359)
..-...+++.|++.++++..
T Consensus 239 ~~~~~~~~l~~~~d~~~v~~g 259 (729)
T 1o94_A 239 DGQKFVEMADSLVDMWDITIG 259 (729)
T ss_dssp HHHHHHHHHGGGCSEEEEEEC
T ss_pred HHHHHHHHHHhhcCEEEEeee
Confidence 12233455668999887653
No 416
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=79.55 E-value=23 Score=31.51 Aligned_cols=119 Identities=8% Similarity=0.003 Sum_probs=55.6
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcE---EEEEeeeecCCCCCCCC------
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPV---RGYVSCVVGCPVEGAIP------ 275 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V---~~~is~~fg~~~~~r~~------ 275 (359)
+-++.+.++|++.|.++......+. ....+. +.+.++.+.++++|+++ ..... +.....+ .+
T Consensus 16 ~~l~~~~~~G~~~iEl~~~~~~~~~--~~~~~~----~~~~~~~~~l~~~gl~~~~~~~h~~--~~~~~~~-~~~~~r~~ 86 (287)
T 2x7v_A 16 RVPQDTVNIGGNSFQIFPHNARSWS--AKLPSD----EAATKFKREMKKHGIDWENAFCHSG--YLINLAS-PKDDIWQK 86 (287)
T ss_dssp GHHHHHHHTTCSEEEECSCCCSSSC--CCCCCH----HHHHHHHHHHHHHTCCGGGEEEECC--TTCCTTC-SSHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCccccc--ccCCCH----HHHHHHHHHHHHcCCCcceeEEecc--cccccCC-CCHHHHHH
Confidence 3467777788888877542110000 001111 22345555666778873 21111 1100111 12
Q ss_pred -HHHHHHHHHHHHHCCcCEEEEc--CCCCCCcHHHHHHHHHHHHH---hCCCceEEEEeCCCC
Q 018252 276 -PSKVAYVAKELHDMGCFEISLG--DTIGVGTPGTVVPMLEAVMA---VVPVEKLAVHLHDTY 332 (359)
Q Consensus 276 -~e~l~~~a~~l~~~Gad~I~L~--DT~G~~~P~~v~~lv~~l~~---~~p~~~L~~H~HNd~ 332 (359)
.+.+.+.++.+.++|+..|.+. ...+.........+++.+++ ...++.|.+|.|+..
T Consensus 87 ~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~ 149 (287)
T 2x7v_A 87 SVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQK 149 (287)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCC
Confidence 2355666677777788877662 11111122223333333332 324577888888653
No 417
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=79.53 E-value=2.2 Score=38.27 Aligned_cols=69 Identities=10% Similarity=-0.059 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCCCCC--cHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 278 KVAYVAKELHDMGCFEISLGDTIGVG--TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT~G~~--~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
...++++.+.++|++.|.+.|--|.. .+.. ++++.+++.++ +++.+|.--.. ...+..++++||+.|..
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~~-ipv~v~ggI~~---~~~~~~~l~~Gad~V~l 103 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAMD-IKVELSGGIRD---DDTLAAALATGCTRVNL 103 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHCS-SEEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhcC-CcEEEECCcCC---HHHHHHHHHcCCCEEEE
Confidence 45667888999999999998754432 2222 78888888764 68888754332 34577888999998764
No 418
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=79.40 E-value=11 Score=34.41 Aligned_cols=96 Identities=15% Similarity=0.145 Sum_probs=61.5
Q ss_pred CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCC--Cce----EEEEe
Q 018252 255 SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP--VEK----LAVHL 328 (359)
Q Consensus 255 G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p--~~~----L~~H~ 328 (359)
++++.. +.+.|.+ ..+.+..+.-++.+.+.|||+|.+.=-.|...- .+.+-+.++++..+ +.+ |+.-.
T Consensus 71 ~v~v~t----vigFP~G-~~~~~~k~~e~~~Av~~GAdEID~vinig~~~~-~v~~ei~~v~~a~~~~g~~lKvIlEt~~ 144 (234)
T 1n7k_A 71 GVKLCS----VIGFPLG-QAPLEVKLVEAQTVLEAGATELDVVPHLSLGPE-AVYREVSGIVKLAKSYGAVVKVILEAPL 144 (234)
T ss_dssp TCCEEE----EESTTTC-CSCHHHHHHHHHHHHHHTCCEEEECCCGGGCHH-HHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CceEEE----EeCCCCC-CCcHHHHHHHHHHHHHcCCCEEEEeccchHHHH-HHHHHHHHHHHHHhhcCCeEEEEEeccC
Confidence 565533 3345543 456676667778888899999998888887766 77777777776431 123 22222
Q ss_pred CCCCCcHHHHHHHHHHcCCCEEeceeeec
Q 018252 329 HDTYGQSLPNILISLQVSPMHAKPCFTFA 357 (359)
Q Consensus 329 HNd~GLAlANalaAv~AGa~~ID~tl~~~ 357 (359)
.++--. .-.+..|+++|||+|-++..|.
T Consensus 145 L~~e~i-~~a~ria~eaGADfVKTsTG~~ 172 (234)
T 1n7k_A 145 WDDKTL-SLLVDSSRRAGADIVKTSTGVY 172 (234)
T ss_dssp SCHHHH-HHHHHHHHHTTCSEEESCCSSS
T ss_pred CCHHHH-HHHHHHHHHhCCCEEEeCCCCC
Confidence 222222 2356778999999999996553
No 419
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=79.38 E-value=20 Score=32.49 Aligned_cols=93 Identities=17% Similarity=0.073 Sum_probs=60.4
Q ss_pred EeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCC---CCcHHHHHHHHHHHHHhCCC--ce--EEEEeCCCCCc
Q 018252 262 VSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVPV--EK--LAVHLHDTYGQ 334 (359)
Q Consensus 262 is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~lv~~l~~~~p~--~~--L~~H~HNd~GL 334 (359)
++.+.+.|.+ ..+.+--+.-++. .+.|||+|-+.=-+| ...-..+.+-+.++++..++ ++ |+.-.=++- .
T Consensus 53 v~tvigFP~G-~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~e-e 129 (226)
T 1vcv_A 53 LCVVADFPFG-ALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDE-E 129 (226)
T ss_dssp EEEEESTTTC-CSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHH-H
T ss_pred EEEEeCCCCC-CCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHH-H
Confidence 3445566654 4455544455566 889999999988888 55577788888888887543 22 221111111 1
Q ss_pred HHHHHHHHHHcCCCEEeceeeec
Q 018252 335 SLPNILISLQVSPMHAKPCFTFA 357 (359)
Q Consensus 335 AlANalaAv~AGa~~ID~tl~~~ 357 (359)
=..-+..|+++|||+|-++.-|.
T Consensus 130 i~~a~~ia~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 130 RYTLYDIIAEAGAHFIKSSTGFA 152 (226)
T ss_dssp HHHHHHHHHHHTCSEEECCCSCC
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC
Confidence 22356778999999999996654
No 420
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=79.36 E-value=9.5 Score=36.47 Aligned_cols=73 Identities=15% Similarity=0.179 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcC-CC--CCC-------cHHH---HHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHH
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGD-TI--GVG-------TPGT---VVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNIL 340 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~D-T~--G~~-------~P~~---v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANal 340 (359)
.+++..++.++++.+.|||.|-++= +. |.. ..++ +..+++++++.. +++|++ |++--. -+.
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-~vpISI---DT~~~~--Va~ 119 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-PQLISV---DTSRPR--VMR 119 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-CSEEEE---ECSCHH--HHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-CCeEEE---eCCCHH--HHH
Confidence 4889999999999999999988873 22 211 1344 445566666665 468887 444444 457
Q ss_pred HHHHcCCCEEec
Q 018252 341 ISLQVSPMHAKP 352 (359)
Q Consensus 341 aAv~AGa~~ID~ 352 (359)
+|+++|+++|+-
T Consensus 120 aAl~aGa~iIND 131 (314)
T 3tr9_A 120 EAVNTGADMIND 131 (314)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHcCCCEEEE
Confidence 888899999864
No 421
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=79.34 E-value=8.9 Score=36.14 Aligned_cols=93 Identities=12% Similarity=0.036 Sum_probs=65.5
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC-EEEEcCCC-CCCcHHHHHHHHHHHHHhCCC
Q 018252 244 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF-EISLGDTI-GVGTPGTVVPMLEAVMAVVPV 321 (359)
Q Consensus 244 i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad-~I~L~DT~-G~~~P~~v~~lv~~l~~~~p~ 321 (359)
++++++.|++.|+-|- +|. -.+.+.+..+++.+.+.+.. +|.+.-.. ..+....+..++..+.+..+
T Consensus 6 ~~~ll~~A~~~~yAv~-----AfN-----v~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~- 74 (286)
T 1gvf_A 6 TKYLLQDAQANGYAVP-----AFN-----IHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYN- 74 (286)
T ss_dssp SHHHHHHHHHHTCCEE-----EEE-----CCSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHCCCEEE-----EEe-----eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCC-
Confidence 3577889999998772 343 24778888999999888765 55554432 23335667788887777766
Q ss_pred ceEEEEeCCCCCcHHHHHHHHHHcCCCE
Q 018252 322 EKLAVHLHDTYGQSLPNILISLQVSPMH 349 (359)
Q Consensus 322 ~~L~~H~HNd~GLAlANalaAv~AGa~~ 349 (359)
+|+.+|. |-|....-+..|+++|.+-
T Consensus 75 VPValHl--DHg~~~e~i~~ai~~GFtS 100 (286)
T 1gvf_A 75 MPLALHL--DHHESLDDIRRKVHAGVRS 100 (286)
T ss_dssp SCBEEEE--EEECCHHHHHHHHHTTCCE
T ss_pred CcEEEEc--CCCCCHHHHHHHHHcCCCe
Confidence 6777765 4455589999999999864
No 422
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=79.34 E-value=30 Score=29.82 Aligned_cols=136 Identities=16% Similarity=0.026 Sum_probs=75.2
Q ss_pred CCHHHHHHHHHHHHhC---CCCEEEEeccCCCCCcCCCC-C-HHHHHHHhhhcCCCeEEEEeC-----ChHhHHHHHHcC
Q 018252 145 VPTGVKVELIRRLVSS---GLPVVEATSFVSPKWVPQLA-D-ARDVMEAVRDLEGARLPVLTP-----NLKGFEAAIAAG 214 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~a---Gv~~IEvG~fvspk~vPq~~-D-~~ev~~~l~~~~~~~l~~l~~-----n~~gie~a~~aG 214 (359)
++.++.++.++.+.+. ++..|-++. ..| .+. + ..++++.+++. +.++...+- ..+.++..++.
T Consensus 50 ~~~~~i~~~i~~~~~~~~~~~~~i~~~G-GEP----~l~~~~l~~l~~~~~~~-~~~i~i~Tng~~~~~~~~~~~l~~~- 122 (245)
T 3c8f_A 50 VTVEDLMKEVVTYRHFMNASGGGVTASG-GEA----ILQAEFVRDWFRACKKE-GIHTCLDTNGFVRRYDPVIDELLEV- 122 (245)
T ss_dssp ECHHHHHHHHGGGHHHHTSTTCEEEEEE-SCG----GGGHHHHHHHHHHHHTT-TCCEEEEECCCCCCCCHHHHHHHHT-
T ss_pred CCHHHHHHHHHHhhhhhcCCCCeEEEEC-CCc----CCCHHHHHHHHHHHHHc-CCcEEEEeCCCcCcCHHHHHHHHHh-
Confidence 4566666666655443 466666654 222 221 2 13444444432 444433331 23456666666
Q ss_pred CCEEEEecCC-c-hHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCc-
Q 018252 215 AKEVAIFASA-S-EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGC- 291 (359)
Q Consensus 215 v~~V~i~~s~-S-~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Ga- 291 (359)
++.|.+.+.. + +.+.+. -+.+. +++.+.++.+++.|+.+.+... +. +. -..+.+.+.++++.+.+.|+
T Consensus 123 ~~~v~isld~~~~~~~~~~-~~~~~----~~~~~~i~~l~~~g~~v~i~~~--~~-~g-~~~~~~~~~~~~~~~~~~~~~ 193 (245)
T 3c8f_A 123 TDLVMLDLKQMNDEIHQNL-VGVSN----HRTLEFAKYLANKNVKVWIRYV--VV-PG-WSDDDDSAHRLGEFTRDMGNV 193 (245)
T ss_dssp CSEEEEECCCSSHHHHHHH-HSSCS----HHHHHHHHHHHHHTCCEEEEEE--EC-TT-TTCCHHHHHHHHHHHHHHCCE
T ss_pred CCEEEEeCCCCCHHHhhhc-cCCCH----HHHHHHHHHHHhcCCEEEEEEe--ec-CC-CCCCHHHHHHHHHHHHhcCCC
Confidence 7888887654 3 344332 24443 4555667777788988765543 21 11 01357888899999999885
Q ss_pred CEEEE
Q 018252 292 FEISL 296 (359)
Q Consensus 292 d~I~L 296 (359)
+.+.+
T Consensus 194 ~~~~~ 198 (245)
T 3c8f_A 194 EKIEL 198 (245)
T ss_dssp EEEEE
T ss_pred ceeEE
Confidence 65554
No 423
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=79.07 E-value=5.8 Score=37.53 Aligned_cols=78 Identities=18% Similarity=0.236 Sum_probs=50.6
Q ss_pred CCCCC-CHHHHHHHHHHHHHCCcCEEEEcC-CC--C---CCcHHHHHHHHHHHHHhCC-CceEEEEeCCCCCcHHHHHHH
Q 018252 270 VEGAI-PPSKVAYVAKELHDMGCFEISLGD-TI--G---VGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILI 341 (359)
Q Consensus 270 ~~~r~-~~e~l~~~a~~l~~~Gad~I~L~D-T~--G---~~~P~~v~~lv~~l~~~~p-~~~L~~H~HNd~GLAlANala 341 (359)
|+|++ +++...+.++++.+.||+.|-++= +. | +-..+++.+++..++.... +++|.+ |++--.+ +.+
T Consensus 38 dgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSI---DT~~~~V--a~a 112 (294)
T 2y5s_A 38 DGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSI---DTYKPAV--MRA 112 (294)
T ss_dssp ------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEE---ECCCHHH--HHH
T ss_pred CCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEE---ECCCHHH--HHH
Confidence 45654 788999999999999999988764 22 2 3335666666655544321 567877 4554444 568
Q ss_pred HHHcCCCEEec
Q 018252 342 SLQVSPMHAKP 352 (359)
Q Consensus 342 Av~AGa~~ID~ 352 (359)
|+++|+++|+-
T Consensus 113 Al~aGa~iINd 123 (294)
T 2y5s_A 113 ALAAGADLIND 123 (294)
T ss_dssp HHHHTCSEEEE
T ss_pred HHHcCCCEEEE
Confidence 88899999963
No 424
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=79.06 E-value=5.6 Score=38.05 Aligned_cols=74 Identities=8% Similarity=0.058 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHH-HHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHH------hCCCceEEEEeCCCCCcHHHHHHHHHHc
Q 018252 273 AIPPSKVAYVAK-ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMA------VVPVEKLAVHLHDTYGQSLPNILISLQV 345 (359)
Q Consensus 273 r~~~e~l~~~a~-~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~------~~p~~~L~~H~HNd~GLAlANalaAv~A 345 (359)
..+.+.-.++++ .+.++|++.|-+. .+...|.+ .+.++.+++ .+|+..+.....+.. ....|+++
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g--~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~-----~i~~a~~~ 108 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIA--SARVSKGE-LETVQKIMEWAATEQLTERIEILGFVDGNK-----TVDWIKDS 108 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEE--ETTSCTTH-HHHHHHHHHHHHHTTCGGGEEEEEESSTTH-----HHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEe--CCCCChhH-HHHHHHHHhhhhhhccCCCCeEEEEccchh-----hHHHHHHC
Confidence 368889999999 9999999988873 33334533 234444554 467778888877754 67788999
Q ss_pred CCCEEecee
Q 018252 346 SPMHAKPCF 354 (359)
Q Consensus 346 Ga~~ID~tl 354 (359)
|++.|...+
T Consensus 109 g~~~v~i~~ 117 (337)
T 3ble_A 109 GAKVLNLLT 117 (337)
T ss_dssp TCCEEEEEE
T ss_pred CCCEEEEEE
Confidence 999988654
No 425
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=79.04 E-value=19 Score=35.59 Aligned_cols=161 Identities=15% Similarity=0.113 Sum_probs=90.5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEecc-CCCCCcCCCC-------CHHHHHHH----hhhc--C-CCeEEEE-eCChH----
Q 018252 146 PTGVKVELIRRLVSSGLPVVEATSF-VSPKWVPQLA-------DARDVMEA----VRDL--E-GARLPVL-TPNLK---- 205 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aGv~~IEvG~f-vspk~vPq~~-------D~~ev~~~----l~~~--~-~~~l~~l-~~n~~---- 205 (359)
.++...+|-+...++|.++|+.-.| +++....... ..+++... +++. . +.-+.+- .|.-.
T Consensus 52 ~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsIGP~g~~l~~ 131 (406)
T 1lt8_A 52 HPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPSYLSA 131 (406)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEECCCHHHHTT
T ss_pred CHHHHHHHHHHHHHhCccceeccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCcccccCC
Confidence 3567788888899999999998655 3332221111 11232221 1221 1 2223322 24211
Q ss_pred ------------hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC
Q 018252 206 ------------GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 273 (359)
Q Consensus 206 ------------gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r 273 (359)
.++..++.|+|-+.+-.-. .+.+++.+++.+++.|+++.+.++ |. .+ ++
T Consensus 132 ~s~eel~~~~~eqi~~L~~~GvDlll~ETi~---------------~~~Eakaa~~a~~~~~lPv~iS~T--~~-~~-G~ 192 (406)
T 1lt8_A 132 KSETEVKKVFLQQLEVFMKKNVDFLIAEYFE---------------HVEEAVWAVETLIASGKPVAATMA--IG-PE-GD 192 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCSEEEECCCS---------------CHHHHHHHHHHHGGGTSCEEEEEC--CB-TT-BC
T ss_pred CCHHHHHHHHHHHHHHHhhCCCCEEEEcccC---------------CHHHHHHHHHHHHHhCCcEEEEEE--EC-CC-CC
Confidence 2334457899998874321 123344556777888988866554 32 22 33
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhC----CCceEEEEe
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV----PVEKLAVHL 328 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~----p~~~L~~H~ 328 (359)
.+=..+.+++..+.++|++.|.+-= ..-|..+..+++.+++.. ...+|.++.
T Consensus 193 l~G~~~~~~~~~l~~~~~~avGvNC---~~gP~~~~~~l~~l~~~~~~~g~~~pl~vyP 248 (406)
T 1lt8_A 193 LHGVPPGEAAVRLVKAGASIIGVNC---HFDPTISLKTVKLMKEGLEAAQLKAHLMSQP 248 (406)
T ss_dssp TTCCCHHHHHHHHHTTTCSEEEEES---SSCHHHHHHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred cCCCcHHHHHHHhhcCCCCEEEecC---CCCHHHHHHHHHHHHHhhhhcCCCccEEEec
Confidence 3333455677777778887666532 235999999999998753 135777665
No 426
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=79.01 E-value=9.1 Score=36.78 Aligned_cols=95 Identities=12% Similarity=0.133 Sum_probs=67.2
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCE-EEEcC-CCCCCcHHHHHHHHHHHHHhCCC
Q 018252 244 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFE-ISLGD-TIGVGTPGTVVPMLEAVMAVVPV 321 (359)
Q Consensus 244 i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~-I~L~D-T~G~~~P~~v~~lv~~l~~~~p~ 321 (359)
.+++++.|++.|+-|- +|. -.+.+.+..+.+.+.+.+... |.+.- +...+....+..++....+.+..
T Consensus 6 ~~~ll~~A~~~~yAV~-----AfN-----v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~ 75 (323)
T 2isw_A 6 LRQMLGEARKHKYGVG-----AFN-----VNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPD 75 (323)
T ss_dssp HHHHHHHHHHTTCCEE-----EEE-----CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHCCceEE-----EEe-----eCCHHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCC
Confidence 4678899999999772 343 257789999999999988764 44432 12233345666777777777555
Q ss_pred ceEEEEeCCCCCcHHHHHHHHHHcCCCEE
Q 018252 322 EKLAVHLHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 322 ~~L~~H~HNd~GLAlANalaAv~AGa~~I 350 (359)
+|+.+|. |-|....-+..|+++|.+-|
T Consensus 76 VPValHl--DHg~~~e~i~~ai~~GFtSV 102 (323)
T 2isw_A 76 IPICIHL--DHGDTLESVKMAIDLGFSSV 102 (323)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHTTCSEE
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCeE
Confidence 7888766 44666788999999998743
No 427
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=78.99 E-value=6.6 Score=39.78 Aligned_cols=68 Identities=13% Similarity=0.043 Sum_probs=52.7
Q ss_pred HHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 279 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 279 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
..+.++.+.++|++.|.+-.+-| .+..+.++++.+++.+|++++..-.=. ...-+..++++||+.|.+
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g--~~~~v~~~i~~i~~~~~~~~vi~g~v~----t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHG--HSQGVIDKVKEVRAKYPSLNIIAGNVA----TAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTSEEEEEEEC----SHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHhhccceEEeccccc--chhhhhhHHHHHHHhCCCceEEeeeec----cHHHHHHHHHhCCCEEEE
Confidence 35678889999999998876654 567888999999999987666653222 345678899999999975
No 428
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=78.98 E-value=11 Score=35.20 Aligned_cols=79 Identities=8% Similarity=0.008 Sum_probs=53.4
Q ss_pred CCHHHHHHHHHHHHHCCcC---EEEE--c--CCCC----CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCC--cHHHHHH
Q 018252 274 IPPSKVAYVAKELHDMGCF---EISL--G--DTIG----VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG--QSLPNIL 340 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad---~I~L--~--DT~G----~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~G--LAlANal 340 (359)
.+++.+.+.++.+.++|+| .|.| . -+-| ...|+.+.++++++++.++ ++|.+-.--++- -...-+.
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~-~Pv~vK~~~~~~~~~~~~~a~ 181 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYG-LPFGVKMPPYFDIAHFDTAAA 181 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHC-SCEEEEECCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcC-CCEEEEECCCCCHHHHHHHHH
Confidence 4788999999999999988 6555 2 1111 1378889999999999763 456655432221 1112266
Q ss_pred HHHHcC-CCEEece
Q 018252 341 ISLQVS-PMHAKPC 353 (359)
Q Consensus 341 aAv~AG-a~~ID~t 353 (359)
.+.++| ++.|.++
T Consensus 182 ~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 182 VLNEFPLVKFVTCV 195 (314)
T ss_dssp HHHTCTTEEEEEEC
T ss_pred HHHhcCCceEEEEe
Confidence 778999 9998754
No 429
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=78.87 E-value=24 Score=33.69 Aligned_cols=88 Identities=13% Similarity=0.013 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeeee-cCCCCCC---------CCH----------HHHHHHHHHHHHCCcCEEEEcCCC
Q 018252 241 LVRYRAVAHAAKVLSIPVRGYVSCVV-GCPVEGA---------IPP----------SKVAYVAKELHDMGCFEISLGDTI 300 (359)
Q Consensus 241 l~~i~~~i~~Ak~~G~~V~~~is~~f-g~~~~~r---------~~~----------e~l~~~a~~l~~~Gad~I~L~DT~ 300 (359)
.+.+..+++.|+++|++|..+.-... ..+..++ .++ .++..+++.+...+++.++++-=.
T Consensus 96 ~~~v~~~~~~Ak~~GL~V~l~p~i~~~~g~w~g~i~~~~~~~~~~~~w~~~f~~y~~~i~~~a~~a~~~~V~~~~IGNE~ 175 (343)
T 3civ_A 96 DDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEKEHGPDLESWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEM 175 (343)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSBSCCTTSSBHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEeeccCCcccccccccCcCCcchHHHHHHHHHHHHHHHHHHHHccCCCceEEEECCCC
Confidence 56778999999999999865332111 0111111 111 234444554556789988886311
Q ss_pred --CCCcHHHHHHHHHHHHHhCCCceEEEEeC
Q 018252 301 --GVGTPGTVVPMLEAVMAVVPVEKLAVHLH 329 (359)
Q Consensus 301 --G~~~P~~v~~lv~~l~~~~p~~~L~~H~H 329 (359)
+...+..+.+|++.+|+.+|+ +|.++..
T Consensus 176 ~~~~~~~~~~~~Li~~vR~~~~g-~VTya~~ 205 (343)
T 3civ_A 176 TTAEPHEAMWRETIARVRTEYDG-LVTYNCN 205 (343)
T ss_dssp TTTTTCHHHHHHHHHHHHHHCCS-EEEEEEE
T ss_pred CCCCchHHHHHHHHHHHHhhCCC-CEEEEec
Confidence 122678899999999999987 8888753
No 430
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=78.72 E-value=34 Score=30.35 Aligned_cols=113 Identities=20% Similarity=0.134 Sum_probs=64.1
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++.+.++|++.|.+-.+-... . .+.+.+.++.|+++|+.+.+.+. ..+ . .+++
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l--------~----~~e~~~~~~~a~~~Gl~~iv~v~---------~~~--e----~~~~ 127 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRM--------L----LADIEAVINKCKNLGLETIVCTN---------NIN--T----SKAV 127 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCC--------B----HHHHHHHHHHHHHHTCEEEEEES---------SSH--H----HHHH
T ss_pred HHHHHHcCCCEEEECCccccC--------C----HHHHHHHHHHHHHCCCeEEEEeC---------Cch--H----HHHH
Confidence 899999999999884321011 1 12256788889999998855442 111 1 2445
Q ss_pred HHCCcCEEEEcCCC--C------CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHH-HHHcCCCEE
Q 018252 287 HDMGCFEISLGDTI--G------VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILI-SLQVSPMHA 350 (359)
Q Consensus 287 ~~~Gad~I~L~DT~--G------~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANala-Av~AGa~~I 350 (359)
.+.|++.|++--.. | ..+|+++.+.++.+++...++++.+ ..|....|... ..+.|++.+
T Consensus 128 ~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~----ggGI~~~~~~~~~~~~gaDgv 196 (219)
T 2h6r_A 128 AALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLC----GAGISKGEDVKAALDLGAEGV 196 (219)
T ss_dssp TTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEE----CSSCCSHHHHHHHHTTTCCCE
T ss_pred HhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEE----EeCcCcHHHHHHHhhCCCCEE
Confidence 56688877765333 2 4446656666666666433455543 23444455555 566777754
No 431
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=78.61 E-value=50 Score=31.94 Aligned_cols=126 Identities=12% Similarity=0.098 Sum_probs=69.8
Q ss_pred HHHHHHHHHhCCCCEEEEec-cCCCCCcCCCCCHHHHHHHhhhc-CCCeEEE-EeCChHhHHHHHHcCCCEEEEecC---
Q 018252 150 KVELIRRLVSSGLPVVEATS-FVSPKWVPQLADARDVMEAVRDL-EGARLPV-LTPNLKGFEAAIAAGAKEVAIFAS--- 223 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~-fvspk~vPq~~D~~ev~~~l~~~-~~~~l~~-l~~n~~gie~a~~aGv~~V~i~~s--- 223 (359)
..+.++.+.++|++.||+.. ... | ....++++.+++. ++..+.+ -+.+.++++.+.++|++.|.+-..
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g~----~--~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~ 227 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHGH----S--TRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGS 227 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCS----S--HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCST
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCC----h--HHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCc
Confidence 35567788899999999842 111 1 1223344444543 3665553 445678899999999999888210
Q ss_pred CchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc
Q 018252 224 ASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG 297 (359)
Q Consensus 224 ~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~ 297 (359)
........+++... ++.+..+.+.++..+++|.+ .++-.+++.+.++. .+||+.|.++
T Consensus 228 ~~~~~~~~~~g~p~---~~~l~~v~~~~~~~~ipVia---------~GGI~~~~d~~~al----a~GAd~V~iG 285 (404)
T 1eep_A 228 ICTTRIVAGVGVPQ---ITAICDVYEACNNTNICIIA---------DGGIRFSGDVVKAI----AAGADSVMIG 285 (404)
T ss_dssp TSHHHHHHCCCCCH---HHHHHHHHHHHTTSSCEEEE---------ESCCCSHHHHHHHH----HHTCSEEEEC
T ss_pred CcCccccCCCCcch---HHHHHHHHHHHhhcCceEEE---------ECCCCCHHHHHHHH----HcCCCHHhhC
Confidence 11111122333322 23334444444445666521 23456777655543 3699888773
No 432
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=78.59 E-value=7.1 Score=36.90 Aligned_cols=93 Identities=13% Similarity=0.073 Sum_probs=65.0
Q ss_pred HHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCE-EEEc-CCCCC-CcHHHHHHHHHHHHH--hC
Q 018252 245 RAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFE-ISLG-DTIGV-GTPGTVVPMLEAVMA--VV 319 (359)
Q Consensus 245 ~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~-I~L~-DT~G~-~~P~~v~~lv~~l~~--~~ 319 (359)
+++++.|++.|+-|- +|.+ .+.+.+..+++.+.+.+... |.+. .+... +....+..++..+.+ ..
T Consensus 10 ~~ll~~A~~~~yAV~-----AfNv-----~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~ 79 (288)
T 3q94_A 10 KEMLNKALEGKYAVG-----QFNM-----NNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNI 79 (288)
T ss_dssp HHHHHHHHHHTCCEE-----EEEC-----CSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCcEEE-----EEee-----CCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCC
Confidence 578889999999773 3432 47789999999999998764 4443 22233 234456777777766 44
Q ss_pred CCceEEEEeCCCCCcHHHHHHHHHHcCCCEE
Q 018252 320 PVEKLAVHLHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 320 p~~~L~~H~HNd~GLAlANalaAv~AGa~~I 350 (359)
+ +|+.+|. |-|....-+..|+++|.+-|
T Consensus 80 ~-VPValHl--DHg~~~e~i~~ai~~GFtSV 107 (288)
T 3q94_A 80 T-VPVAIHL--DHGSSFEKCKEAIDAGFTSV 107 (288)
T ss_dssp C-SCEEEEE--EEECSHHHHHHHHHHTCSEE
T ss_pred C-CcEEEEC--CCCCCHHHHHHHHHcCCCeE
Confidence 3 6777765 44557888999999998743
No 433
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=78.52 E-value=40 Score=30.84 Aligned_cols=134 Identities=13% Similarity=0.033 Sum_probs=0.0
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhC--CCcEEEEEeeeecCCCCCCC---CHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL--SIPVRGYVSCVVGCPVEGAI---PPSKV 279 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~--G~~V~~~is~~fg~~~~~r~---~~e~l 279 (359)
..++.+.+.|+|-|-+-+.--+-+.. .+.+.+.+...++. ++++.+++ =..+.+|.. +.+.+
T Consensus 36 ~~~~~~~~~~~D~vElRvD~l~~~~~----------~~~v~~~l~~lr~~~~~~PiI~T~---Rt~~eGG~~~~~~~~~~ 102 (257)
T 2yr1_A 36 REAEEVCRKQPDLLEWRADFFRAIDD----------QERVLATANGLRNIAGEIPILFTI---RSEREGGQPIPLNEAEV 102 (257)
T ss_dssp HHHHHHHHSCCSEEEEEGGGCTTTTC----------HHHHHHHHHHHHHHSSSCCEEEEC---CCTTTTCCCCSSCHHHH
T ss_pred HHHHHHhhcCCCEEEEEeecccccCc----------HHHHHHHHHHHHHhccCCCEEEEE---eecccCCCCCCCCHHHH
Q ss_pred HHHHHHHHHCC-cCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEE-eCCCC--CcHHHHHHHHHHcCCCEEeceee
Q 018252 280 AYVAKELHDMG-CFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVH-LHDTY--GQSLPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 280 ~~~a~~l~~~G-ad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H-~HNd~--GLAlANalaAv~AGa~~ID~tl~ 355 (359)
.++.+.+.+.| ++-|-+-=..+- .+.++++..++.-..+.+++| |+.+. .-=..-...+.+.|||++-.+++
T Consensus 103 ~~ll~~~~~~g~~d~iDvEl~~~~----~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~~ 178 (257)
T 2yr1_A 103 RRLIEAICRSGAIDLVDYELAYGE----RIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVM 178 (257)
T ss_dssp HHHHHHHHHHTCCSEEEEEGGGTT----HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEECCCCh----hHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEec
No 434
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=78.46 E-value=35 Score=34.65 Aligned_cols=157 Identities=18% Similarity=0.196 Sum_probs=96.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhh-cCCCeEEEEeCChHhHH---HHHHcCCCEEE
Q 018252 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLPVLTPNLKGFE---AAIAAGAKEVA 219 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~-~~~~~l~~l~~n~~gie---~a~~aGv~~V~ 219 (359)
.++..++..| +...+.|++.|=+-+.-++ +|..++.+.+.. ...+.+.+.+.+.++++ ..++. .|.|
T Consensus 190 ~lt~~D~~DI-~~~l~~g~d~I~lpfV~sa------eDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~~-~DgI- 260 (500)
T 1a3w_A 190 ALSEKDKEDL-RFGVKNGVHMVFASFIRTA------NDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKV-TDGV- 260 (500)
T ss_dssp SSCHHHHHHH-HHHHHHTCSEEEECSCCSH------HHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHHH-SSEE-
T ss_pred CCChhHHHHH-HHHHHcCCCEEEECCCCCH------HHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHHh-CCEE-
Confidence 4566666665 5556789999866542221 345555555543 25678888887665554 33333 4543
Q ss_pred EecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEE----eeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEE
Q 018252 220 IFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYV----SCVVGCPVEGAIPPSKVAYVAKELHDMGCFEIS 295 (359)
Q Consensus 220 i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~i----s~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~ 295 (359)
++...|+-.. ++ .++.....+.++..|+++|+.+...= ||. .+| +-+..++.+++..+.+ |+|.|.
T Consensus 261 -mvgrgDLgve--lg--~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi-~~~---~ptraEvsdva~av~~-G~d~vm 330 (500)
T 1a3w_A 261 -MVARGDLGIE--IP--APEVLAVQKKLIAKSNLAGKPVICATQMLESMT-YNP---RPTRAEVSDVGNAILD-GADCVM 330 (500)
T ss_dssp -EECHHHHHHH--TT--GGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGG-SCS---SCCHHHHHHHHHHHHH-TCSEEC
T ss_pred -EECchHhhhh--cC--cHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhc-cCC---CchHHHHHHHHHHHHh-CCCEEE
Confidence 4343343322 22 34555666889999999999873100 001 122 3355677777776654 999999
Q ss_pred E-cCCCCCCcHHHHHHHHHHHHHhC
Q 018252 296 L-GDTIGVGTPGTVVPMLEAVMAVV 319 (359)
Q Consensus 296 L-~DT~G~~~P~~v~~lv~~l~~~~ 319 (359)
| .||.=--.|.+..+.+..+....
T Consensus 331 Ls~eta~G~yPveaV~~m~~I~~~a 355 (500)
T 1a3w_A 331 LSGETAKGNYPINAVTTMAETAVIA 355 (500)
T ss_dssp BSTTTTTCSCHHHHHHHHHHHHHHH
T ss_pred ecchhhcchhHHHHHHHHHHHHHHh
Confidence 8 57777778999888888777654
No 435
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=78.30 E-value=7 Score=36.95 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCC-----------CCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHH
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILIS 342 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaA 342 (359)
..++.+.+.++++.+.|++.|.+.-+-| ..+|+.+.++++..++. ++++.+|++.+ .....+
T Consensus 169 ~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~-----~~i~~~ 241 (423)
T 3feq_A 169 DGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAA--NTYVMAHAYTG-----RAIARA 241 (423)
T ss_dssp CSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT--TCCEEEEEEEH-----HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHC--CCeEEEEeCCh-----HHHHHH
Confidence 3567888888888889988776653322 46788888888877764 36788898833 456677
Q ss_pred HHcCCCEEece
Q 018252 343 LQVSPMHAKPC 353 (359)
Q Consensus 343 v~AGa~~ID~t 353 (359)
+++|++.|+=+
T Consensus 242 l~~g~~~i~H~ 252 (423)
T 3feq_A 242 VRCGVRTIEHG 252 (423)
T ss_dssp HHHTCCEEEEE
T ss_pred HHcCCCEEecc
Confidence 88999877643
No 436
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=78.30 E-value=23 Score=32.57 Aligned_cols=101 Identities=13% Similarity=0.039 Sum_probs=0.0
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcCCCC--------CHHHHHHHhhhcCCCeEEEEeCCh------------------H
Q 018252 152 ELIRRLVSSGLPVVEATSFVSPKWVPQLA--------DARDVMEAVRDLEGARLPVLTPNL------------------K 205 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG~fvspk~vPq~~--------D~~ev~~~l~~~~~~~l~~l~~n~------------------~ 205 (359)
+.++.+.++|++.||+.....+...+.-. +.+++.+.+++. ++++.++.... +
T Consensus 40 ~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~-GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (305)
T 3obe_A 40 NGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDA-GLRISSSHLTPSLREYTKENMPKFDEFWKK 118 (305)
T ss_dssp HHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHT-TCEEEEEBCCCSCCCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHC-CCeEEEeeccccccccchhhHHHHHHHHHH
Q ss_pred hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcE
Q 018252 206 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPV 258 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V 258 (359)
-++.|.+.|++.|.+.......-... .+...+.+.++.++|+++|+++
T Consensus 119 ~i~~A~~lG~~~v~~~~~~~~~~~~~-----~~~~~~~l~~l~~~a~~~Gv~l 166 (305)
T 3obe_A 119 ATDIHAELGVSCMVQPSLPRIENEDD-----AKVVSEIFNRAGEITKKAGILW 166 (305)
T ss_dssp HHHHHHHHTCSEEEECCCCCCSSHHH-----HHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHcCCCEEEeCCCCCCCCHHH-----HHHHHHHHHHHHHHHHHcCCEE
No 437
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=78.13 E-value=16 Score=33.41 Aligned_cols=179 Identities=11% Similarity=0.104 Sum_probs=85.8
Q ss_pred HHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC----------Ch-----------HhHHHHHH
Q 018252 154 IRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP----------NL-----------KGFEAAIA 212 (359)
Q Consensus 154 a~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~----------n~-----------~gie~a~~ 212 (359)
++.+.++|++.||+.......+.+ .+.+++.+.+++ .++++.+.++ +. +-++.|.+
T Consensus 42 l~~~~~~G~~~vEl~~~~~~~~~~--~~~~~l~~~l~~-~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~ 118 (309)
T 2hk0_A 42 IEKVAKLGFDIIEVAAHHINEYSD--AELATIRKSAKD-NGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAK 118 (309)
T ss_dssp HHHHHHTTCSEEEEEHHHHTTSCH--HHHHHHHHHHHH-TTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEeccCCccccch--hhHHHHHHHHHH-cCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 566778999999998631100000 223444444432 3555555431 11 12344556
Q ss_pred cCCCEEEEecCC-chHHH-Hh-hhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHC
Q 018252 213 AGAKEVAIFASA-SEAFS-KS-NINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDM 289 (359)
Q Consensus 213 aGv~~V~i~~s~-S~~~~-~~-n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~ 289 (359)
.|++.|.+.... ...+. .. ......+...+.++.+.+.|++.|+++. +...-..+...-.+++.+.++++.+-
T Consensus 119 lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lEn~~~~~~~~~~~~~~~~~l~~~v~-- 194 (309)
T 2hk0_A 119 LDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLC--IEVLNRFENHVLNTAAEGVAFVKDVG-- 194 (309)
T ss_dssp TTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEE--EECCCTTTCSSCCSHHHHHHHHHHHT--
T ss_pred cCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEE--EeecccccccccCCHHHHHHHHHHcC--
Confidence 799988754310 00000 00 0001134556777888889999998753 32110001112357888888877653
Q ss_pred CcCEEE-EcCCCCCCcH-HHHHHHHHHHHHhCCCceEEEEeCCC----CCcH---HHHHHHHHH
Q 018252 290 GCFEIS-LGDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDT----YGQS---LPNILISLQ 344 (359)
Q Consensus 290 Gad~I~-L~DT~G~~~P-~~v~~lv~~l~~~~p~~~L~~H~HNd----~GLA---lANalaAv~ 344 (359)
...+. +-|+.=...- .+..+.++.+ .+ -...+|.||. .|.| ....+.+++
T Consensus 195 -~~~vg~~~D~~H~~~~g~d~~~~l~~~---~~-~i~~vHl~D~~r~~~G~G~id~~~~~~~L~ 253 (309)
T 2hk0_A 195 -KNNVKVMLDTFHMNIEEDSFGDAIRTA---GP-LLGHFHTGESNRRVPGKGRMPWHEIGLALR 253 (309)
T ss_dssp -CTTEEEEEEHHHHHHHCSCHHHHHHHH---GG-GEEEEEECCTTSCCTTSSCCCHHHHHHHHH
T ss_pred -CCCeEEEEehhhHhhcCcCHHHHHHHH---Hh-hEEEEEeCCCCCCCCcCCccCHHHHHHHHH
Confidence 22222 2354211110 1122333322 23 4678899885 3433 344555554
No 438
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=78.01 E-value=17 Score=37.77 Aligned_cols=138 Identities=12% Similarity=0.078 Sum_probs=79.1
Q ss_pred HHHHHHcCCCEEEEecCC---------chHHHH--hhhcCCHHHHHHHHHHHHHHHHhC---CCcEEEEEeeeecCCCCC
Q 018252 207 FEAAIAAGAKEVAIFASA---------SEAFSK--SNINCSIEDSLVRYRAVAHAAKVL---SIPVRGYVSCVVGCPVEG 272 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~---------S~~~~~--~n~~~t~~e~l~~i~~~i~~Ak~~---G~~V~~~is~~fg~~~~~ 272 (359)
.++|.++|.|-|.+...- |+..++ ..+|-+.++-.+-+.++++.+|+. .+.|..-|+.. ....+
T Consensus 162 A~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~--~~~~~ 239 (690)
T 3k30_A 162 VRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVE--EEIDG 239 (690)
T ss_dssp HHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECC--CCSTT
T ss_pred HHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECcc--ccCCC
Confidence 346677899988774431 111111 234667776666667777776664 34455556531 11123
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCC-------CCCc-HHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHH
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLGDTI-------GVGT-PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ 344 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~DT~-------G~~~-P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~ 344 (359)
-.+.++..++++.+.+ |+|.|.+.=.. .... +....++++.+++.+. +++-.=+.- .....+..+++
T Consensus 240 g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~pvi~~G~i---~~~~~a~~~l~ 314 (690)
T 3k30_A 240 GITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTT-KPVVGVGRF---TSPDAMVRQIK 314 (690)
T ss_dssp SCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCS-SCEEECSCC---CCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcC-CeEEEeCCC---CCHHHHHHHHH
Confidence 4667889999999988 79987764210 0011 1122466777787765 344332111 12456778899
Q ss_pred cC-CCEEe
Q 018252 345 VS-PMHAK 351 (359)
Q Consensus 345 AG-a~~ID 351 (359)
.| ||.|-
T Consensus 315 ~g~~d~v~ 322 (690)
T 3k30_A 315 AGILDLIG 322 (690)
T ss_dssp TTSCSEEE
T ss_pred CCCcceEE
Confidence 98 88774
No 439
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=78.00 E-value=32 Score=29.45 Aligned_cols=105 Identities=7% Similarity=-0.024 Sum_probs=62.6
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
+.++.+.+.|++.|++-.+. .+..+..+.++.+.+.++..|..+.. . +.++
T Consensus 30 ~~~~~~~~~G~~~i~l~~~~----------~~~~~~~~~~~~l~~~~~~~~v~v~v-------~------------~~~~ 80 (215)
T 1xi3_A 30 ESVREALEGGATAIQMRIKN----------APTREMYEIGKTLRQLTREYDALFFV-------D------------DRVD 80 (215)
T ss_dssp HHHHHHHHTTCSEEEECCCS----------CCHHHHHHHHHHHHHHHHHTTCEEEE-------E------------SCHH
T ss_pred HHHHHHHHCCCCEEEECCCC----------CCHHHHHHHHHHHHHHHHHcCCeEEE-------c------------ChHH
Confidence 66888889999999886431 23344455555555555555665421 1 1225
Q ss_pred HHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 285 ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 285 ~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
.+.++|++.|-+... ...+..+.+ +. ++..+++-+|+. ..+..+.+.|+++|=.
T Consensus 81 ~a~~~gad~v~l~~~--~~~~~~~~~----~~---~~~~~~v~~~t~-----~e~~~~~~~g~d~i~~ 134 (215)
T 1xi3_A 81 VALAVDADGVQLGPE--DMPIEVAKE----IA---PNLIIGASVYSL-----EEALEAEKKGADYLGA 134 (215)
T ss_dssp HHHHHTCSEEEECTT--SCCHHHHHH----HC---TTSEEEEEESSH-----HHHHHHHHHTCSEEEE
T ss_pred HHHHcCCCEEEECCc--cCCHHHHHH----hC---CCCEEEEecCCH-----HHHHHHHhcCCCEEEE
Confidence 667789999988532 122333222 22 345677777653 3345678899998854
No 440
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=77.93 E-value=18 Score=34.41 Aligned_cols=136 Identities=14% Similarity=0.086 Sum_probs=74.0
Q ss_pred HHHHHHHHHhCCCCEEEEec----cCCCCCcCCCCCHHH-HHH----HhhhcC--CCeEEEEeC-ChHhHHHHHHcCCCE
Q 018252 150 KVELIRRLVSSGLPVVEATS----FVSPKWVPQLADARD-VME----AVRDLE--GARLPVLTP-NLKGFEAAIAAGAKE 217 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~----fvspk~vPq~~D~~e-v~~----~l~~~~--~~~l~~l~~-n~~gie~a~~aGv~~ 217 (359)
.+++++.+.++|++.|-+.= +.+|+ +.++ ++. .++.++ ++.+..++. +..-++...+.|++.
T Consensus 195 ~~~~~~~~~~aGad~i~i~D~~~~~lsp~------~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~~~~l~~l~~~g~d~ 268 (359)
T 2inf_A 195 IIVYVKAQIKAGAKAIQIFDSWVGALNQA------DYRTYIKPVMNRIFSELAKENVPLIMFGVGASHLAGDWHDLPLDV 268 (359)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTGGGSCHH------HHHHHTHHHHHHHHHHHGGGCSCEEEECTTCGGGHHHHHTSSCSE
T ss_pred HHHHHHHHHHhCCCEEEEeCCccccCCHH------HHHHHhHHHHHHHHHHHHHcCCcEEEEcCCcHHHHHHHHHhCCCE
Confidence 45566777889999987752 22221 1111 111 122222 555666665 434577777899997
Q ss_pred EEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCC--CcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCc--CE
Q 018252 218 VAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS--IPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGC--FE 293 (359)
Q Consensus 218 V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G--~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Ga--d~ 293 (359)
+.+--. .+. +.+++.| +.+.|+|... .. ..+++.+.+-++++.+.|. ..
T Consensus 269 ~~~d~~-----------~d~-----------~~~~~~g~~~~l~Gnldp~--~l---~~t~e~I~~~v~~~l~~~~~~~g 321 (359)
T 2inf_A 269 VGLDWR-----------LGI-----------DEARSKGITKTVQGNLDPS--IL---LAPWEVIEQKTKEILDQGMESDG 321 (359)
T ss_dssp EECCTT-----------SCH-----------HHHHHTTCCSEEECCBCGG--GG---GSCHHHHHHHHHHHHHHHTTSSC
T ss_pred EEeCCC-----------CCH-----------HHHHHcCCCEEEEecCChH--Hh---cCCHHHHHHHHHHHHHhCCCCCC
Confidence 765211 111 1112223 3444554421 11 2478888888888876554 24
Q ss_pred EEEcCCCCCC---cHHHHHHHHHHHHHh
Q 018252 294 ISLGDTIGVG---TPGTVVPMLEAVMAV 318 (359)
Q Consensus 294 I~L~DT~G~~---~P~~v~~lv~~l~~~ 318 (359)
+.|.-.-|+. .|+.+..+++++++.
T Consensus 322 ~Il~~gcgi~~~~~~enl~a~ve~v~~~ 349 (359)
T 2inf_A 322 FIFNLGHGVFPDVSPEVLKKLTAFVHEY 349 (359)
T ss_dssp EEBCBSSCCCTTSCHHHHHHHHHHHHHH
T ss_pred eEEeCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 6655544543 367777778777653
No 441
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=77.72 E-value=17 Score=34.24 Aligned_cols=73 Identities=15% Similarity=0.188 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCC-----cHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHH-HHHHHHcCC
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVG-----TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPN-ILISLQVSP 347 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~-----~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlAN-alaAv~AGa 347 (359)
.+++++.+.++.+.+.|+..|.| +.|-. .+..+.++++.+++.++ +.+ |.+ .|+-..- ...-.++|+
T Consensus 91 ls~eei~~~~~~~~~~G~~~i~l--~gGe~p~~~~~~~~~~~l~~~ik~~~~-i~i--~~s--~g~~~~e~l~~L~~aG~ 163 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAGFHMVDL--TMGEDPYYYEDPNRFVELVQIVKEELG-LPI--MIS--PGLMDNATLLKAREKGA 163 (350)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEE--EECCCHHHHHSTHHHHHHHHHHHHHHC-SCE--EEE--CSSCCHHHHHHHHHTTE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEE--eeCCCCccccCHHHHHHHHHHHHhhcC-ceE--EEe--CCCCCHHHHHHHHHcCC
Confidence 58999999999999999999998 33431 24566888998888765 344 443 3443333 334445898
Q ss_pred CEEece
Q 018252 348 MHAKPC 353 (359)
Q Consensus 348 ~~ID~t 353 (359)
+.+...
T Consensus 164 ~~i~i~ 169 (350)
T 3t7v_A 164 NFLALY 169 (350)
T ss_dssp EEEECC
T ss_pred CEEEEe
Confidence 887643
No 442
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=77.64 E-value=39 Score=30.29 Aligned_cols=120 Identities=14% Similarity=0.085 Sum_probs=54.2
Q ss_pred hHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEE-EeeeecCCCCCCCC-------HH
Q 018252 206 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGY-VSCVVGCPVEGAIP-------PS 277 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~-is~~fg~~~~~r~~-------~e 277 (359)
-++.+.++|++.|.+.......+.. ....+. +.+.++.+.++++|+++... .......+.. ..+ .+
T Consensus 35 ~l~~~~~~G~~~iEl~~~~~~~~~~-~~~~~~----~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~-~~d~~~r~~~~~ 108 (295)
T 3cqj_A 35 RLQLAKTLGFDFVEMSVDETDERLS-RLDWSR----EQRLALVNAIVETGVRVPSMCLSAHRRFPLG-SEDDAVRAQGLE 108 (295)
T ss_dssp HHHHHHHTTCSEEEEECCSSHHHHG-GGGCCH----HHHHHHHHHHHHHCCEEEEEEEGGGGTSCTT-CSSHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEecCCcccccC-cccCCH----HHHHHHHHHHHHcCCeEEEEecCcccCCCCC-CCCHHHHHHHHH
Confidence 4566666777777776543222110 111221 22344555566777776321 1100000011 112 24
Q ss_pred HHHHHHHHHHHCCcCEEEEcCC---CCCCcHHHHHHHHHHHHH---hC--CCceEEEEeCCC
Q 018252 278 KVAYVAKELHDMGCFEISLGDT---IGVGTPGTVVPMLEAVMA---VV--PVEKLAVHLHDT 331 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~DT---~G~~~P~~v~~lv~~l~~---~~--p~~~L~~H~HNd 331 (359)
.+.+.++.+.++|+..|.+.-. .+.........+++.+++ .. -++.|.+|.|+.
T Consensus 109 ~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 170 (295)
T 3cqj_A 109 IMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDY 170 (295)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSS
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCC
Confidence 5666666667778877776410 011122333333333332 11 136777777764
No 443
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=77.59 E-value=26 Score=32.78 Aligned_cols=91 Identities=13% Similarity=0.030 Sum_probs=64.1
Q ss_pred HhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc----------CCCCCC---cHHHHHHHHHHHHHh
Q 018252 252 KVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG----------DTIGVG---TPGTVVPMLEAVMAV 318 (359)
Q Consensus 252 k~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~----------DT~G~~---~P~~v~~lv~~l~~~ 318 (359)
+..|.++.+.|. |. +|+.+.+.++.+.++ +|.|.|- |-.|.. .|..+.++++++++.
T Consensus 55 ~~~~~~~~~QL~---g~------~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~ 124 (318)
T 1vhn_A 55 QPHERNVAVQIF---GS------EPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKS 124 (318)
T ss_dssp CTTCTTEEEEEE---CS------CHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHH
T ss_pred CcCCCeEEEEeC---CC------CHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHh
Confidence 445777766663 32 589999999999999 9977663 444542 588999999999998
Q ss_pred CCCceEEEEeCC--CCCcHHHHHHHHHHcCCCEEece
Q 018252 319 VPVEKLAVHLHD--TYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 319 ~p~~~L~~H~HN--d~GLAlANalaAv~AGa~~ID~t 353 (359)
++ .++.+-..- +..-...-+..+.++|++.|+++
T Consensus 125 ~~-~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~ 160 (318)
T 1vhn_A 125 VS-GKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIH 160 (318)
T ss_dssp CS-SEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEE
T ss_pred hC-CCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEc
Confidence 86 567766432 22223356677788999999764
No 444
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=77.43 E-value=38 Score=32.41 Aligned_cols=103 Identities=14% Similarity=0.051 Sum_probs=0.0
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++..++.|++-|.+.-++.|.+ -.|.+|-.+-++. +....++|.+.+. ..+.++.+++++.+
T Consensus 53 v~~li~~Gv~Gl~v~GtTGE~~-----~Ls~eEr~~vi~~----~~~grvpViaGvg---------~~st~eai~la~~A 114 (344)
T 2hmc_A 53 GKELIADGMSAVVYCGSMGDWP-----LLTDEQRMEGVER----LVKAGIPVIVGTG---------AVNTASAVAHAVHA 114 (344)
T ss_dssp HHHHHHTTCCCEEESSGGGTGG-----GSCHHHHHHHHHH----HHHTTCCEEEECC---------CSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCccCcChh-----hCCHHHHHHHHHH----HhCCCCcEEEecC---------CCCHHHHHHHHHHH
Q ss_pred HHCCcCEEEEcCCCCCC--cHHHHHHHHHHHHHhCCCceEEEE
Q 018252 287 HDMGCFEISLGDTIGVG--TPGTVVPMLEAVMAVVPVEKLAVH 327 (359)
Q Consensus 287 ~~~Gad~I~L~DT~G~~--~P~~v~~lv~~l~~~~p~~~L~~H 327 (359)
.++|+|.+-+.=..=.- +++.+.+.+++|.+...++||-+.
T Consensus 115 ~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilY 157 (344)
T 2hmc_A 115 QKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIY 157 (344)
T ss_dssp HHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEE
T ss_pred HhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEE
No 445
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=77.38 E-value=15 Score=32.80 Aligned_cols=86 Identities=17% Similarity=0.071 Sum_probs=53.1
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCC---CcHHHHHHHHHHHHHhCCCceEEEEeCCCCCc----HHHHH
Q 018252 267 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ----SLPNI 339 (359)
Q Consensus 267 g~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GL----AlANa 339 (359)
+.|.+.. ..+....-++.+.+.|+|.|.+.=-.|. ..+..+.+.++++++..+.+.+-+= -.+.++ ...-+
T Consensus 61 ~~P~g~~-~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi-~e~~~l~~~~~~~~a 138 (225)
T 1mzh_A 61 GFPLGLN-KTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVI-VETPYLNEEEIKKAV 138 (225)
T ss_dssp STTTCCS-CHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEE-CCGGGCCHHHHHHHH
T ss_pred cCCCCcc-chhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEE-EeCCCCCHHHHHHHH
Confidence 4455433 3344444567888899999885333343 3567788889999987743333221 111222 34557
Q ss_pred HHHHHcCCCEEecee
Q 018252 340 LISLQVSPMHAKPCF 354 (359)
Q Consensus 340 laAv~AGa~~ID~tl 354 (359)
..+.++||+.|.++-
T Consensus 139 ~~a~eaGad~I~tst 153 (225)
T 1mzh_A 139 EICIEAGADFIKTST 153 (225)
T ss_dssp HHHHHHTCSEEECCC
T ss_pred HHHHHhCCCEEEECC
Confidence 788999999997664
No 446
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=77.38 E-value=31 Score=32.36 Aligned_cols=128 Identities=13% Similarity=0.109 Sum_probs=80.7
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEE-EEeCChHhHHHHHHcCCCEEEEecCCchH
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLP-VLTPNLKGFEAAIAAGAKEVAIFASASEA 227 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~-~l~~n~~gie~a~~aGv~~V~i~~s~S~~ 227 (359)
+-++.+....++|.+.|=+=.- ..+.. ..| .+| ..+++.-.+++- =+.++.+=++.|++...+.|.+. |-.+-
T Consensus 54 Dpv~aA~~ae~aGAdGITvHlR-eDrRH--I~d-~Dv-~~L~~~i~t~lNlEma~t~emi~ial~~kP~~vtLV-PEkre 127 (278)
T 3gk0_A 54 DPVRAALAAEDAGADAITLHLR-EDRRH--IVD-ADV-RTLRPRVKTRMNLECAVTPEMLDIACEIRPHDACLV-PEKRS 127 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEECC-TTCSS--SCH-HHH-HHHHHHCSSCEEEEECSSHHHHHHHHHHCCSEEEEC-CCSGG
T ss_pred CHHHHHHHHHHcCCCEEEeccC-CCccc--CCH-HHH-HHHHHHcCCCEEeecCCCHHHHHHHHHcCCCEEEEC-CCCCC
Confidence 3456677777899999866431 11100 123 233 334433334442 23456677888888887777764 43444
Q ss_pred HHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE
Q 018252 228 FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL 296 (359)
Q Consensus 228 ~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L 296 (359)
.....-|++.....+.+.++++..++.|+.|...| .| ++ +.++.+.+.|++.|-|
T Consensus 128 E~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFI-----Dp-----d~----~qI~aA~~~GAd~IEL 182 (278)
T 3gk0_A 128 ELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFI-----DP-----DE----AQIRAAHETGAPVIEL 182 (278)
T ss_dssp GBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEE-----CS-----CH----HHHHHHHHHTCSEEEE
T ss_pred CcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEe-----CC-----CH----HHHHHHHHhCcCEEEE
Confidence 44445567666778899999999999999985433 22 33 4567777899999988
No 447
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=77.33 E-value=24 Score=33.61 Aligned_cols=143 Identities=17% Similarity=0.235 Sum_probs=77.9
Q ss_pred HHHHHHHHHhCCCCEEEEec----cCCCCCcCCCC--CHHHHHHHhh-hc-C----CCeEEEEeC-ChHhHHHHHHcCCC
Q 018252 150 KVELIRRLVSSGLPVVEATS----FVSPKWVPQLA--DARDVMEAVR-DL-E----GARLPVLTP-NLKGFEAAIAAGAK 216 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~----fvspk~vPq~~--D~~ev~~~l~-~~-~----~~~l~~l~~-n~~gie~a~~aGv~ 216 (359)
.+++++.+.++|++.|-+.= +.+|+.+..+. -...+.+.++ .. + ++.+..++- +..-++...++|++
T Consensus 199 ~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~~~~l~~l~~~g~d 278 (367)
T 1r3s_A 199 LVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGYE 278 (367)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTCGGGHHHHTTSSCS
T ss_pred HHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCcHHHHHHHHhcCCC
Confidence 34566677789999987752 22332100000 0012333333 21 1 465666665 44567777889999
Q ss_pred EEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCC--CcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHC-C--c
Q 018252 217 EVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS--IPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDM-G--C 291 (359)
Q Consensus 217 ~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G--~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~-G--a 291 (359)
.+.+-- +.+..++. +..| +.+.+++.... . ..+++.+.+.++++.+. | -
T Consensus 279 ~i~~d~-----------~~dl~~a~----------~~~g~~~~l~Gnldp~~--L---~gt~e~i~~~v~~~l~~~g~~g 332 (367)
T 1r3s_A 279 VVGLDW-----------TVAPKKAR----------ECVGKTVTLQGNLDPCA--L---YASEEEIGQLVKQMLDDFGPHR 332 (367)
T ss_dssp EEECCT-----------TSCHHHHH----------HHHCSSSEEEEEECGGG--G---GSCHHHHHHHHHHHHHHHCSSS
T ss_pred EEEeCC-----------CCCHHHHH----------HHcCCCeEEEeCCChHH--h---cCCHHHHHHHHHHHHHHhCCCC
Confidence 877621 12222221 1123 45677776421 1 24788888888877654 5 4
Q ss_pred CEEEEcCCCCC-CcHHHHHHHHHHHHHh
Q 018252 292 FEISLGDTIGV-GTPGTVVPMLEAVMAV 318 (359)
Q Consensus 292 d~I~L~DT~G~-~~P~~v~~lv~~l~~~ 318 (359)
..+++.-.+-. ..|+.+..+++++++.
T Consensus 333 ~I~~~ghgi~~~~p~env~a~v~~v~~~ 360 (367)
T 1r3s_A 333 YIANLGHGLYPDMDPEHVGAFVDAVHKH 360 (367)
T ss_dssp EEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred eeecCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 56666543333 3467788888887763
No 448
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=77.32 E-value=25 Score=32.98 Aligned_cols=77 Identities=9% Similarity=-0.005 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHCCcCEEEE--c--CCCC---CCcHHHHHHHHHHHHHhCC--------CceEEEEeCCCCC--cHHHH
Q 018252 276 PSKVAYVAKELHDMGCFEISL--G--DTIG---VGTPGTVVPMLEAVMAVVP--------VEKLAVHLHDTYG--QSLPN 338 (359)
Q Consensus 276 ~e~l~~~a~~l~~~Gad~I~L--~--DT~G---~~~P~~v~~lv~~l~~~~p--------~~~L~~H~HNd~G--LAlAN 338 (359)
++.+.+.++.+.+ |+|.|.+ . -|.| ...|..+.++++++++..+ +.+|.+-..-++. -...-
T Consensus 152 ~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~ 230 (336)
T 1f76_A 152 KDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQV 230 (336)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHH
Confidence 6778888887766 8886544 1 1222 1247778899999998762 5788887765443 22444
Q ss_pred HHHHHHcCCCEEece
Q 018252 339 ILISLQVSPMHAKPC 353 (359)
Q Consensus 339 alaAv~AGa~~ID~t 353 (359)
+..+.++|++.|+++
T Consensus 231 a~~l~~~Gvd~i~vs 245 (336)
T 1f76_A 231 ADSLVRHNIDGVIAT 245 (336)
T ss_dssp HHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCcEEEEe
Confidence 678889999999976
No 449
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=77.32 E-value=31 Score=32.39 Aligned_cols=161 Identities=15% Similarity=0.174 Sum_probs=93.0
Q ss_pred HHHHHHhCCCCEEEEecc-CC-CCCcCC--CCCHHHHHHHhhhc-CCCeEEEEe--CC----h----HhHHHHHHcCCCE
Q 018252 153 LIRRLVSSGLPVVEATSF-VS-PKWVPQ--LADARDVMEAVRDL-EGARLPVLT--PN----L----KGFEAAIAAGAKE 217 (359)
Q Consensus 153 ia~~L~~aGv~~IEvG~f-vs-pk~vPq--~~D~~ev~~~l~~~-~~~~l~~l~--~n----~----~gie~a~~aGv~~ 217 (359)
-++.+.++|++.|=+|+. ++ ..-.|. .-..++++..++.+ ..+.+.+++ +. . +-+.+..++|+.-
T Consensus 27 sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~g 106 (290)
T 2hjp_A 27 VAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYEAAGASA 106 (290)
T ss_dssp HHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeE
Confidence 355777899999999852 11 022232 23567777777643 233333344 32 1 2244556689999
Q ss_pred EEEecCCchH---HHH--hhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 218 VAIFASASEA---FSK--SNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 218 V~i~~s~S~~---~~~--~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
|++-....+- |.. .+.=.+.++..++++.+++....-|+.+.+--- ++. .....+..++-++.+.++|||
T Consensus 107 v~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtd-a~~----a~~g~~~ai~Ra~ay~eAGAd 181 (290)
T 2hjp_A 107 IVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVE-ALI----AGLGQQEAVRRGQAYEEAGAD 181 (290)
T ss_dssp EEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEEC-TTT----TTCCHHHHHHHHHHHHHTTCS
T ss_pred EEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeeh-Hhh----ccccHHHHHHHHHHHHHcCCc
Confidence 9997654311 111 000134567777887777665554565544321 110 122468899999999999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHhCC
Q 018252 293 EISLGDTIGVGTPGTVVPMLEAVMAVVP 320 (359)
Q Consensus 293 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p 320 (359)
.|.+.= ++-+++++.++.+.+...+|
T Consensus 182 ~i~~e~--~~~~~~~~~~i~~~~~~~vP 207 (290)
T 2hjp_A 182 AILIHS--RQKTPDEILAFVKSWPGKVP 207 (290)
T ss_dssp EEEECC--CCSSSHHHHHHHHHCCCSSC
T ss_pred EEEeCC--CCCCHHHHHHHHHHcCCCCC
Confidence 998742 13457788777776653344
No 450
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=76.96 E-value=15 Score=35.58 Aligned_cols=77 Identities=16% Similarity=0.138 Sum_probs=55.2
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhC-CCceEEEEeCCCCCcHHHH--HHHHHHcCCCE
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPN--ILISLQVSPMH 349 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~-p~~~L~~H~HNd~GLAlAN--alaAv~AGa~~ 349 (359)
..+++.+.+.++.+.+.|.+.|-|+ +|. .|.+-.+.++++|+.+ |+.+|.+=+|.-+...-|- +-+.-+.|+.+
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiK--vG~-~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~ 225 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLK--VGR-APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYW 225 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEE--CCS-CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeec--cCC-CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCE
Confidence 3578899999999999999988887 454 7888889999999988 5667777666555443332 22223468888
Q ss_pred Eec
Q 018252 350 AKP 352 (359)
Q Consensus 350 ID~ 352 (359)
|+-
T Consensus 226 iEq 228 (389)
T 3ozy_A 226 FEE 228 (389)
T ss_dssp EES
T ss_pred EEC
Confidence 874
No 451
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=76.76 E-value=15 Score=35.25 Aligned_cols=140 Identities=13% Similarity=0.072 Sum_probs=78.0
Q ss_pred HHHHHHcCCCEEEEecCC--------chHHHHh--hhcCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEeeeecCCCC-CC
Q 018252 207 FEAAIAAGAKEVAIFASA--------SEAFSKS--NINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCVVGCPVE-GA 273 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~--------S~~~~~~--n~~~t~~e~l~~i~~~i~~Ak~~-G~-~V~~~is~~fg~~~~-~r 273 (359)
.++|.++|.|-|.|..+- |+..++. .+|-|.++=+.-+.++++..|+. |- .+..-|+..-..+.. ..
T Consensus 158 A~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~ 237 (358)
T 4a3u_A 158 ARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDS 237 (358)
T ss_dssp HHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCS
T ss_pred HHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCccc
Confidence 356778999988885432 2222221 24567776666666777766654 32 243344421111111 12
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCC--CCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC-CCEE
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTI--GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS-PMHA 350 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~--G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG-a~~I 350 (359)
.+.+.+.++++.+.++|++.+.+.... +...+.....+.+.+|+.+.. ++.+-. +.....+..+++.| ||.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~~~-~v~~~g----~~~~~~ae~~l~~G~aD~V 312 (358)
T 4a3u_A 238 HPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVFKP-PLVLNQ----DYTFETAQAALDSGVADAI 312 (358)
T ss_dssp STHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHCCS-CEEEES----SCCHHHHHHHHHHTSCSEE
T ss_pred chHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHhcCC-cEEEeC----CCCHHHHHHHHHcCCceEe
Confidence 355677888999999999988774321 111222222345666776643 444432 22356677889999 7876
Q ss_pred e
Q 018252 351 K 351 (359)
Q Consensus 351 D 351 (359)
-
T Consensus 313 ~ 313 (358)
T 4a3u_A 313 S 313 (358)
T ss_dssp E
T ss_pred H
Confidence 4
No 452
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=76.75 E-value=44 Score=30.32 Aligned_cols=111 Identities=10% Similarity=0.055 Sum_probs=61.3
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeec--CCCCCCCC-------HH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG--CPVEGAIP-------PS 277 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg--~~~~~r~~-------~e 277 (359)
++.+.++|++.|.+.... .+ ... + ..+.++.+.++++|+++.... .+. ....+ .+ .+
T Consensus 42 l~~~~~~G~~~vEl~~~~--~~-----~~~-~---~~~~~l~~~l~~~gl~i~~~~--~~~~~~~l~~-~d~~~r~~~~~ 107 (309)
T 2hk0_A 42 IEKVAKLGFDIIEVAAHH--IN-----EYS-D---AELATIRKSAKDNGIILTAGI--GPSKTKNLSS-EDAAVRAAGKA 107 (309)
T ss_dssp HHHHHHTTCSEEEEEHHH--HT-----TSC-H---HHHHHHHHHHHHTTCEEEEEC--CCCSSSCSSC-SCHHHHHHHHH
T ss_pred HHHHHHhCCCEEEeccCC--cc-----ccc-h---hhHHHHHHHHHHcCCeEEEec--CCCCCCCCCC-CCHHHHHHHHH
Confidence 788888899988886431 00 111 1 334566677788899875521 121 11111 12 25
Q ss_pred HHHHHHHHHHHCCcCEEEEc--CCCCCC------cHHHHHHHHHHHHH---hC--CCceEEEEeCCC
Q 018252 278 KVAYVAKELHDMGCFEISLG--DTIGVG------TPGTVVPMLEAVMA---VV--PVEKLAVHLHDT 331 (359)
Q Consensus 278 ~l~~~a~~l~~~Gad~I~L~--DT~G~~------~P~~v~~lv~~l~~---~~--p~~~L~~H~HNd 331 (359)
++.+.++.+.++|+..|... +..|.. .......+++.+++ .. -++.|.+|.|+.
T Consensus 108 ~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~ 174 (309)
T 2hk0_A 108 FFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNR 174 (309)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCT
T ss_pred HHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeeccc
Confidence 67777788888999888743 112432 22333333333332 21 247899999864
No 453
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=76.73 E-value=23 Score=34.00 Aligned_cols=122 Identities=11% Similarity=0.018 Sum_probs=63.6
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCC---CCCCC--CH---
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP---VEGAI--PP--- 276 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~---~~~r~--~~--- 276 (359)
+-++.+.++|++.|.+.. ... ...+.+..+.-+.+.++.+.++++|+++...-...|+.| +..-. ++
T Consensus 37 e~l~~aa~~G~~~VEl~~----~~l-~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~spd~~~r 111 (393)
T 1xim_A 37 EAVHKLAEIGAYGITFHD----DDL-VPFGSDAQTRDGIIAGFKKALDETGLIVPMVTTNLFTHPVFKDGGFTSNDRSVR 111 (393)
T ss_dssp HHHHHHHHHTCSEEECBH----HHH-SCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHH
T ss_pred HHHHHHHHhCCCEEEeec----ccC-CCccccccccHHHHHHHHHHHHHhCCEEEEEecCCcCCcccccCCCCCCCHHHH
Confidence 457778888999988851 000 011122212234556677778889998732111112111 11111 22
Q ss_pred ----HHHHHHHHHHHHCCcCEEEEc-CCCCCC-----c-HHHHHHHHHHHH---HhCC----CceEEEEeCCC
Q 018252 277 ----SKVAYVAKELHDMGCFEISLG-DTIGVG-----T-PGTVVPMLEAVM---AVVP----VEKLAVHLHDT 331 (359)
Q Consensus 277 ----e~l~~~a~~l~~~Gad~I~L~-DT~G~~-----~-P~~v~~lv~~l~---~~~p----~~~L~~H~HNd 331 (359)
+++.+.++.+.++|+..|.+. -..|.- . ......+++.++ +... ++.|.+|.|+.
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~l~lE~~~~ 184 (393)
T 1xim_A 112 RYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEPKPN 184 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEecCCC
Confidence 467777778888999988763 112221 1 122233333333 2221 58999999974
No 454
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=76.70 E-value=14 Score=34.83 Aligned_cols=188 Identities=12% Similarity=0.073 Sum_probs=103.0
Q ss_pred HHHHHHhCCCCEEEEecc-CC-CCCcCCC--CCHHHHHHHhhhc-CCCeEEEEe--CC----h----HhHHHHHHcCCCE
Q 018252 153 LIRRLVSSGLPVVEATSF-VS-PKWVPQL--ADARDVMEAVRDL-EGARLPVLT--PN----L----KGFEAAIAAGAKE 217 (359)
Q Consensus 153 ia~~L~~aGv~~IEvG~f-vs-pk~vPq~--~D~~ev~~~l~~~-~~~~l~~l~--~n----~----~gie~a~~aGv~~ 217 (359)
-++.+.++|++.|=+|+. ++ ..-.|.. -..++++..++.+ ..+.+.+++ +. . +-+++..++|+.-
T Consensus 31 sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaag 110 (295)
T 1s2w_A 31 SARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNNARRLVRKLEDRGVAG 110 (295)
T ss_dssp HHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHHHHHHHHHHHHcCCcE
Confidence 355677789999999842 11 1112221 1234555555532 122233333 31 1 2345556789999
Q ss_pred EEEecCCchHHHHhhhc-----CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC
Q 018252 218 VAIFASASEAFSKSNIN-----CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF 292 (359)
Q Consensus 218 V~i~~s~S~~~~~~n~~-----~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad 292 (359)
|++-....+--.-+--+ .+.++..++++.+++....-|+.+.+--- ++. .....+..++-++++.++|||
T Consensus 111 v~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtd-a~~----a~~g~~~ai~Ra~ay~eAGAd 185 (295)
T 1s2w_A 111 ACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVE-AFI----AGWGLDEALKRAEAYRNAGAD 185 (295)
T ss_dssp EEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEEC-TTT----TTCCHHHHHHHHHHHHHTTCS
T ss_pred EEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeeh-HHh----ccccHHHHHHHHHHHHHcCCC
Confidence 99976653221111011 35677788887777665544555544321 110 012468899999999999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 293 EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 293 ~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
.|.+- .|+-+++++.++.+.+...+|. -+-. ..+|.- ..-.--++|+++|-..
T Consensus 186 ~i~~e--~~~~~~~~~~~i~~~~~~~~P~---i~~~-~~~~~~--~~~eL~~lGv~~v~~~ 238 (295)
T 1s2w_A 186 AILMH--SKKADPSDIEAFMKAWNNQGPV---VIVP-TKYYKT--PTDHFRDMGVSMVIWA 238 (295)
T ss_dssp EEEEC--CCSSSSHHHHHHHHHHTTCSCE---EECC-STTTTS--CHHHHHHHTCCEEEEC
T ss_pred EEEEc--CCCCCHHHHHHHHHHcCCCCCE---EEeC-CCCCCC--CHHHHHHcCCcEEEEC
Confidence 99985 1455688888888888644552 2211 112321 2445667888887544
No 455
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=76.64 E-value=65 Score=32.22 Aligned_cols=134 Identities=10% Similarity=-0.054 Sum_probs=78.5
Q ss_pred HHHHHHcCCCEEEEecCCchHHHH--hhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecC-C--CC-CCCCHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSK--SNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-P--VE-GAIPPSKVA 280 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~--~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-~--~~-~r~~~e~l~ 280 (359)
++...++|++.|-+.-+++ |.. .-++.+..+.++.+++ .. .+.++.. |.. + .+ ..++.+-+.
T Consensus 36 a~~L~~~Gv~~IE~g~~at--F~~~~r~~~~d~~e~l~~i~~---~~--~~~~l~~-----l~R~~N~~G~~~~~ddv~~ 103 (464)
T 2nx9_A 36 AQQLDQIGYWSLECWGGAT--FDSCIRFLGEDPWQRLRLLKQ---AM--PNTPLQM-----LLRGQNLLGYRHYADDVVD 103 (464)
T ss_dssp HHHHHTSCCSEEEEEETTH--HHHHHHTTCCCHHHHHHHHHH---HC--SSSCEEE-----EECGGGTTSSSCCCHHHHH
T ss_pred HHHHHHcCCCEEEeCcCcc--ccchhhccCCCHHHHHHHHHH---hC--CCCeEEE-----EeccccccCcccccchhhH
Confidence 5666678999998876543 211 1123344444444332 11 2344421 210 1 11 123445566
Q ss_pred HHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCC------CCcHHHHHHHHHHcCCCEEecee
Q 018252 281 YVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDT------YGQSLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 281 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd------~GLAlANalaAv~AGa~~ID~tl 354 (359)
..++.+.++|++.|.+.|..--. ..+.+.++.+++.- ..+.+..|-. ..-.+.-+.++.++||++|-.+=
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd~--~ni~~~i~~ak~~G--~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~D 179 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMNDV--RNMQQALQAVKKMG--AHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKD 179 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTT--CEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHhCCcCEEEEEEecCHH--HHHHHHHHHHHHCC--CEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 78888999999999999876443 67778888777753 3444444443 33446677788899999886553
Q ss_pred ee
Q 018252 355 TF 356 (359)
Q Consensus 355 ~~ 356 (359)
+.
T Consensus 180 T~ 181 (464)
T 2nx9_A 180 MA 181 (464)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 456
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=76.58 E-value=26 Score=33.13 Aligned_cols=123 Identities=15% Similarity=0.157 Sum_probs=80.5
Q ss_pred CCCHHHHHHHhhhc----CCCeEEEEeCChHhHHHHHH--cCC-CEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHH
Q 018252 179 LADARDVMEAVRDL----EGARLPVLTPNLKGFEAAIA--AGA-KEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAA 251 (359)
Q Consensus 179 ~~D~~ev~~~l~~~----~~~~l~~l~~n~~gie~a~~--aGv-~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~A 251 (359)
....+++....... ..+.+.+++.+..++.++-+ ... ....+++...|.-.......+.++.+.....++..|
T Consensus 138 vesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~DL~~~lG~~~~~~~l~~ar~~iv~Aa 217 (316)
T 3qll_A 138 TESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAADMAADIGAASTWEPLALARARLVSAC 217 (316)
T ss_dssp CCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHHHHHHHTCCSSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHHHHHHhCCCCCcHHHHHHHHHHHHHH
Confidence 45556655444433 24677788877777765433 212 345667777777665444456677777778899999
Q ss_pred HhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC-EEEEcCCCCCCcHHHHHHHHHHH
Q 018252 252 KVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF-EISLGDTIGVGTPGTVVPMLEAV 315 (359)
Q Consensus 252 k~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad-~I~L~DT~G~~~P~~v~~lv~~l 315 (359)
+.+|+.+.. .++..-.+++-+.+-++...++|-+ ..++ .|.++.-+=+.+
T Consensus 218 raaGi~~id-------~v~~~~~D~~gl~~e~~~~r~lGf~Gk~~I-------HP~QI~~vn~~f 268 (316)
T 3qll_A 218 AMNGIPAID-------APFFDVHDVSGLQSETLRASDFGFSAKAAI-------HPAQISTINTLF 268 (316)
T ss_dssp HHHTCCEEE-------CCCSCSSCHHHHHHHHHHHHHHTCCEEEES-------SGGGHHHHHHHT
T ss_pred HHcCCceee-------ccccCcCCHHHHHHHHHHHHHCCCCeEEee-------CHHHHHHHHHHh
Confidence 999997622 2223345788888999999999987 4443 788877654443
No 457
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=76.57 E-value=23 Score=31.27 Aligned_cols=153 Identities=14% Similarity=0.118 Sum_probs=79.2
Q ss_pred HHHHHHHHHhCCCCEEEEeccCCC------CCcCCCCC---HHHHHHHhhhcCCCeEEEEeC----Ch----HhHHHHHH
Q 018252 150 KVELIRRLVSSGLPVVEATSFVSP------KWVPQLAD---ARDVMEAVRDLEGARLPVLTP----NL----KGFEAAIA 212 (359)
Q Consensus 150 k~~ia~~L~~aGv~~IEvG~fvsp------k~vPq~~D---~~ev~~~l~~~~~~~l~~l~~----n~----~gie~a~~ 212 (359)
-.+.++.+.++|++.||+...... ...+...+ .+++.+.++ -.++++.++.+ .. +.++.|.+
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gl~i~~~~~~~~~~~~~~~~~i~~A~~ 102 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAA-SKGIKIVGTGVYVAEKSSDWEKMFKFAKA 102 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHH-HTTCEEEEEEEECCSSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHH-HcCCeEEEEeccCCccHHHHHHHHHHHHH
Confidence 345667788899999999853110 00011122 233333333 35666666543 22 34666777
Q ss_pred cCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCC-CCHHHHHHHHHHHHHCCc
Q 018252 213 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAKELHDMGC 291 (359)
Q Consensus 213 aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r-~~~e~l~~~a~~l~~~Ga 291 (359)
.|++.|.+... . +.++.+.+.|+++|+++. +... +.... .+++.+.++++. +.
T Consensus 103 lGa~~v~~~~~-~----------------~~~~~l~~~a~~~gv~l~--~En~---~~~~~~~~~~~~~~ll~~----~~ 156 (262)
T 3p6l_A 103 MDLEFITCEPA-L----------------SDWDLVEKLSKQYNIKIS--VHNH---PQPSDYWKPENLLKAISG----RS 156 (262)
T ss_dssp TTCSEEEECCC-G----------------GGHHHHHHHHHHHTCEEE--EECC---SSSSSSSSHHHHHHHHTT----SC
T ss_pred cCCCEEEecCC-H----------------HHHHHHHHHHHHhCCEEE--EEeC---CCccccCCHHHHHHHHHh----CC
Confidence 89999888632 1 123466778889998763 3321 11122 367777776652 33
Q ss_pred CEEEE-cCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCC
Q 018252 292 FEISL-GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY 332 (359)
Q Consensus 292 d~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~ 332 (359)
..+.+ -||.=...-. .+....+++ +.+-...+|.+|..
T Consensus 157 ~~~g~~~D~~h~~~~g--~d~~~~l~~-~~~~i~~vH~~D~~ 195 (262)
T 3p6l_A 157 QSLGSCSDVGHWRREG--LNQIDCLKQ-LKGRIISLHFKDIA 195 (262)
T ss_dssp TTEEEEEEHHHHHHTT--CCHHHHHHH-TTTCEEEEEECEEC
T ss_pred CceEEEechHHHHhcC--CCHHHHHHH-HhhhheEEeeccCC
Confidence 32322 3542111100 012233333 33346788999865
No 458
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=76.48 E-value=33 Score=31.55 Aligned_cols=128 Identities=12% Similarity=0.080 Sum_probs=80.4
Q ss_pred HHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEE-EEeCChHhHHHHHHcCCCEEEEecCCchH
Q 018252 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLP-VLTPNLKGFEAAIAAGAKEVAIFASASEA 227 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~-~l~~n~~gie~a~~aGv~~V~i~~s~S~~ 227 (359)
+-++.+....++|-+-|=+=.- ..+.. ..| .+| ..++....+++- =+.++.+=++.|++...+.+.+. |-.+-
T Consensus 26 dpv~aA~~ae~aGAdgITvHlR-eDrRH--I~d-~Dv-~~L~~~~~~~lNlE~a~t~emi~ia~~~kP~~vtLV-PE~r~ 99 (243)
T 1m5w_A 26 DPVQAAFIAEQAGADGITVHLR-EDRRH--ITD-RDV-RILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLV-PEKRQ 99 (243)
T ss_dssp CHHHHHHHHHTTTCSEEEEECC-TTCSS--SCH-HHH-HHHHHHCSSEEEEEECSSHHHHHHHHHHCCSEEEEC-CCCSS
T ss_pred CHHHHHHHHHHcCCCEEEeCCC-CCccc--CCH-HHH-HHHHHhcCCCEEeccCCCHHHHHHHHHcCCCEEEEC-CCCCC
Confidence 3456666677899999866431 11111 223 233 344444455553 34456677888888887877764 32332
Q ss_pred HHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE
Q 018252 228 FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL 296 (359)
Q Consensus 228 ~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L 296 (359)
-....-|++.....+.+.++++..++.|+.|...| .| ++ +.++.+.+.|++.|-|
T Consensus 100 e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFI-----Dp-----d~----~qi~aA~~~GA~~IEL 154 (243)
T 1m5w_A 100 EVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFI-----DA-----DE----EQIKAAAEVGAPFIEI 154 (243)
T ss_dssp CSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEE-----CS-----CH----HHHHHHHHTTCSEEEE
T ss_pred CcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEe-----CC-----CH----HHHHHHHHhCcCEEEE
Confidence 23334566666778899999999999999985433 22 33 4567788899998876
No 459
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=76.32 E-value=11 Score=35.03 Aligned_cols=172 Identities=13% Similarity=0.074 Sum_probs=78.7
Q ss_pred CCHHHHHHHHHHHHhC-CCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC---------------Ch----
Q 018252 145 VPTGVKVELIRRLVSS-GLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP---------------NL---- 204 (359)
Q Consensus 145 ~~~~~k~~ia~~L~~a-Gv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~---------------n~---- 204 (359)
.+.++ .++.+.++ |++.||+.++-.. -.+.+++.+.+++ .++++.++.+ +.
T Consensus 33 ~~~~e---~l~~aa~~~G~~~VEl~~~~~~-----~~~~~~l~~~l~~-~Gl~i~~~~~~~~~~~~~~g~l~~~d~~~r~ 103 (333)
T 3ktc_A 33 LSTID---QINAAKEVGELSYVDLPYPFTP-----GVTLSEVKDALKD-AGLKAIGITPEIYLQKWSRGAFTNPDPAARA 103 (333)
T ss_dssp CCHHH---HHHHHHHHSSEEEEEEEESCST-----TCCHHHHHHHHHH-HTCEEEEEEECTTSGGGTTCSTTCSSHHHHH
T ss_pred CCHHH---HHHHHHHhCCCCEEEecCCCcc-----hhHHHHHHHHHHH-cCCeEEEEecCcCcccccCCCCCCcCHHHHH
Confidence 45554 44455667 9999999753211 1466776666654 2455544332 11
Q ss_pred -------HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCC--CCCC
Q 018252 205 -------KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE--GAIP 275 (359)
Q Consensus 205 -------~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~--~r~~ 275 (359)
+.++.|.+.|++.|.+..... .+. .....+.++.++++.+.++.+.+.--++...|...-..+.. .-.+
T Consensus 104 ~~i~~~~~~i~~A~~LGa~~vv~~~g~~-g~~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~~i~lE~~p~~~~~~~~~~~ 181 (333)
T 3ktc_A 104 AAFELMHESAGIVRELGANYVKVWPGQD-GWD-YPFQVSHKNLWKLAVDGMRDLAGANPDVKFAIEYKPREPRVKMTWDS 181 (333)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCTTC-EES-STTSSCHHHHHHHHHHHHHHHHHTCTTSEEEEECCSCSSSSEESSCS
T ss_pred HHHHHHHHHHHHHHHhCCCEEEECCCCC-CcC-CCCcCCHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCCCCccccCCC
Confidence 124445567999997765411 000 00112344444444443333333222233333311111111 1246
Q ss_pred HHHHHHHHHHHHHCCcCEEE-EcCCCCCCcH--HHHHHHHHHHHHhCCCceEEEEeCCCCC
Q 018252 276 PSKVAYVAKELHDMGCFEIS-LGDTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYG 333 (359)
Q Consensus 276 ~e~l~~~a~~l~~~Gad~I~-L~DT~G~~~P--~~v~~lv~~l~~~~p~~~L~~H~HNd~G 333 (359)
++.+.++++.+ +.+.+. +-|| |.+.+ ....+.++.++ ..+...++|.+|..|
T Consensus 182 ~~~~~~ll~~v---~~~~vgl~lD~-~H~~~~g~~~~~~~~~~~--~~~~i~~vH~~D~~~ 236 (333)
T 3ktc_A 182 AARTLLGIEDI---GLDNVGVLLDF-GHALYGGESPADSAQLII--DRGRLFGMDVNDNLR 236 (333)
T ss_dssp HHHHHHHHHHH---TCTTEEEEEEH-HHHHHTTCCHHHHHHHHH--HTTCEEEEEBCBCCS
T ss_pred HHHHHHHHHHc---CCcceEEEEec-CcHhhhcCCHHHHHHHHH--hCCCEEEEEeCCCCC
Confidence 77777777655 333232 3354 22221 11223333322 123355899998543
No 460
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=76.26 E-value=9.6 Score=33.99 Aligned_cols=51 Identities=10% Similarity=0.068 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCCCCCcHH-HHHHHHHHHHHhCCCceEEEEeCCC
Q 018252 277 SKVAYVAKELHDMGCFEISLGDTIGVGTPG-TVVPMLEAVMAVVPVEKLAVHLHDT 331 (359)
Q Consensus 277 e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~-~v~~lv~~l~~~~p~~~L~~H~HNd 331 (359)
+.+.+.++.+.++|+..|.+. .|...+. .+.++.+...+ . ++.|.+|.|.+
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~--~g~~~~~~~l~~l~~~a~~-~-Gv~l~lEn~~~ 135 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVS--LGLLPEQPDLAALGRRLAR-H-GLQLLVENDQT 135 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEE--EECCCSSCCHHHHHHHHTT-S-SCEEEEECCSS
T ss_pred HHHHHHHHHHHHcCCCEEEEe--cCCCCcHHHHHHHHHHHHh-c-CCEEEEecCCC
Confidence 455566666666677665543 1222221 33333332222 2 35666666643
No 461
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=75.96 E-value=3.2 Score=38.29 Aligned_cols=75 Identities=15% Similarity=0.030 Sum_probs=54.4
Q ss_pred CCHHHHHHHHHHHHHCCcC--EEEEcCCCCCCcHHHH--HHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCE
Q 018252 274 IPPSKVAYVAKELHDMGCF--EISLGDTIGVGTPGTV--VPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMH 349 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad--~I~L~DT~G~~~P~~v--~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ 349 (359)
.|...+.+-++.+.++|+| .|-+.| |...|.-. .++++++|+..|+.++.+|.+=+.--.. .-.+.++||++
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmD--g~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~--i~~~~~aGAd~ 112 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMD--NHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDAL--IESFAKAGATS 112 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEB--SSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHH--HHHHHHHTCSE
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecC--CCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHH--HHHHHHcCCCE
Confidence 4666788899999999998 677777 55444221 2678888988877899999994433322 45678999999
Q ss_pred Eec
Q 018252 350 AKP 352 (359)
Q Consensus 350 ID~ 352 (359)
|..
T Consensus 113 itv 115 (246)
T 3inp_A 113 IVF 115 (246)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 462
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=75.88 E-value=45 Score=30.06 Aligned_cols=141 Identities=11% Similarity=0.047 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHhCCCCEEEEec--cCCCCCcCCCCCHHHHHHHhh---hcC-CCeEEEEeCCh-H-------------hH
Q 018252 148 GVKVELIRRLVSSGLPVVEATS--FVSPKWVPQLADARDVMEAVR---DLE-GARLPVLTPNL-K-------------GF 207 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEvG~--fvspk~vPq~~D~~ev~~~l~---~~~-~~~l~~l~~n~-~-------------gi 207 (359)
++.++-++.+.+.|.|.||+=. +..+ +.+.+.+.++ +.. +..+..-+|.. + -+
T Consensus 17 ~e~~~~~~~~~~~~~D~vElRvD~l~~~-------~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 89 (238)
T 1sfl_A 17 EETLIQKINHRIDAIDVLELRIDQFENV-------TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLI 89 (238)
T ss_dssp -CHHHHHHHHTTTTCSEEEEECTTSTTC-------CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCCEEEEEecccccC-------CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHH
Confidence 4445667777788999999975 2221 3444544443 333 45555555522 1 14
Q ss_pred HHHHHc-CCCEEEEecCC--chHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHH
Q 018252 208 EAAIAA-GAKEVAIFASA--SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 284 (359)
Q Consensus 208 e~a~~a-Gv~~V~i~~s~--S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~ 284 (359)
+.+++. +++.|.+-... .+ +.+.++++.+++.|.++.+..= .|. . .-+.+++.+..+
T Consensus 90 ~~~~~~~~~d~iDvEl~~~~~~---------------~~~~~l~~~~~~~~~kvI~S~H-df~---~-tp~~~el~~~~~ 149 (238)
T 1sfl_A 90 SDLANINGIDMIDIEWQADIDI---------------EKHQRIITHLQQYNKEVIISHH-NFE---S-TPPLDELQFIFF 149 (238)
T ss_dssp HHGGGCTTCCEEEEECCTTSCH---------------HHHHHHHHHHHHTTCEEEEEEE-ESS---C-CCCHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEEccCCCCh---------------HHHHHHHHHHHhcCCEEEEEec-CCC---C-CcCHHHHHHHHH
Confidence 555666 58888885542 22 2344677888888888754321 221 1 123578999999
Q ss_pred HHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHH
Q 018252 285 ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMA 317 (359)
Q Consensus 285 ~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~ 317 (359)
++.+.|||.+-|+=+. -.+.++..++.+..+
T Consensus 150 ~~~~~gaDivKia~~a--~~~~D~l~ll~~~~~ 180 (238)
T 1sfl_A 150 KMQKFNPEYVKLAVMP--HNKNDVLNLLQAMST 180 (238)
T ss_dssp HHHTTCCSEEEEEECC--SSHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEecC--CCHHHHHHHHHHHHH
Confidence 9999999999988764 347888888876554
No 463
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=75.73 E-value=37 Score=29.44 Aligned_cols=115 Identities=11% Similarity=0.012 Sum_probs=65.0
Q ss_pred CeEEEEeCCh-------HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCH---HHHHHHHHHHHHHHHhCCCcEEEEEee
Q 018252 195 ARLPVLTPNL-------KGFEAAIAAGAKEVAIFASASEAFSKSNINCSI---EDSLVRYRAVAHAAKVLSIPVRGYVSC 264 (359)
Q Consensus 195 ~~l~~l~~n~-------~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~---~e~l~~i~~~i~~Ak~~G~~V~~~is~ 264 (359)
.++..+++.. +.++.+++.|++.|++-....+. ... .+..+.+. +.++..|..+..
T Consensus 18 ~~i~~It~~~~~~~~~~~~~~~~~~~G~~~i~l~~~~~~~-------~~~~~~~~~~~~l~---~~~~~~~v~v~v---- 83 (227)
T 2tps_A 18 LSVYFIMGSNNTKADPVTVVQKALKGGATLYQFREKGGDA-------LTGEARIKFAEKAQ---AACREAGVPFIV---- 83 (227)
T ss_dssp TTEEEEECGGGCSSCHHHHHHHHHHHTCSEEEECCCSTTC-------CCHHHHHHHHHHHH---HHHHHHTCCEEE----
T ss_pred CCEEEEECCccccchHHHHHHHHHHCCCCEEEEecCCCCH-------hHHHHHHHHHHHHH---HHHHHcCCeEEE----
Confidence 3466666532 35788889999999886432211 112 23333333 333445666521
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHH
Q 018252 265 VVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ 344 (359)
Q Consensus 265 ~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~ 344 (359)
. +.++.+.++|++.|.+.+.. + . +..+++.++...+++.+|+. ..+..+.+
T Consensus 84 ---~------------~~~~~a~~~gad~v~l~~~~----~-~----~~~~~~~~g~~~~~~s~~t~-----~e~~~a~~ 134 (227)
T 2tps_A 84 ---N------------DDVELALNLKADGIHIGQED----A-N----AKEVRAAIGDMILGVSAHTM-----SEVKQAEE 134 (227)
T ss_dssp ---E------------SCHHHHHHHTCSEEEECTTS----S-C----HHHHHHHHTTSEEEEEECSH-----HHHHHHHH
T ss_pred ---c------------CHHHHHHHcCCCEEEECCCc----c-C----HHHHHHhcCCcEEEEecCCH-----HHHHHHHh
Confidence 1 11345667899999986643 1 1 23334433324677767753 23567888
Q ss_pred cCCCEEec
Q 018252 345 VSPMHAKP 352 (359)
Q Consensus 345 AGa~~ID~ 352 (359)
.|+++|-.
T Consensus 135 ~g~d~v~~ 142 (227)
T 2tps_A 135 DGADYVGL 142 (227)
T ss_dssp HTCSEEEE
T ss_pred CCCCEEEE
Confidence 99999863
No 464
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=75.67 E-value=20 Score=37.62 Aligned_cols=139 Identities=8% Similarity=-0.048 Sum_probs=78.7
Q ss_pred HHHHHHcCCCEEEEecCC--------chHHHH--hhhcCCHHHHHHHHHHHHHHHHhC---CCcEEEEEeeeecCCCCCC
Q 018252 207 FEAAIAAGAKEVAIFASA--------SEAFSK--SNINCSIEDSLVRYRAVAHAAKVL---SIPVRGYVSCVVGCPVEGA 273 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~--------S~~~~~--~n~~~t~~e~l~~i~~~i~~Ak~~---G~~V~~~is~~fg~~~~~r 273 (359)
.++|.++|.|-|.+..+- |+..++ ..+|-+.++-.+.+.++++..|+. ++.|.+-|+..-.....+.
T Consensus 155 A~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~ 234 (729)
T 1o94_A 155 AKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQI 234 (729)
T ss_dssp HHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSC
T ss_pred HHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCC
Confidence 346677899988876543 222221 235667777677777777777664 4556666663211111122
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCC-----CCCcH-----HH-HHHHHHHHHHhCCCceEEEEeCCCCCc-HHHHHHH
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTI-----GVGTP-----GT-VVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILI 341 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~-----G~~~P-----~~-v~~lv~~l~~~~p~~~L~~H~HNd~GL-AlANala 341 (359)
...+...++++.+.+ ++|.|.+.=-. +...| .. ..++++.+++.+. +++-.=+ |. ....+..
T Consensus 235 ~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~pvi~~G----~i~~~~~a~~ 308 (729)
T 1o94_A 235 EAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSK-KPVLGVG----RYTDPEKMIE 308 (729)
T ss_dssp CTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCS-SCEECCS----CCCCHHHHHH
T ss_pred CchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCC-CEEEEeC----CCCCHHHHHH
Confidence 214567788888877 78876652210 00111 11 2567788888764 3443211 22 2466788
Q ss_pred HHHcC-CCEEe
Q 018252 342 SLQVS-PMHAK 351 (359)
Q Consensus 342 Av~AG-a~~ID 351 (359)
+++.| ||.|-
T Consensus 309 ~l~~g~aD~V~ 319 (729)
T 1o94_A 309 IVTKGYADIIG 319 (729)
T ss_dssp HHHTTSCSBEE
T ss_pred HHHCCCCCEEE
Confidence 89998 88764
No 465
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=75.62 E-value=20 Score=35.02 Aligned_cols=88 Identities=13% Similarity=0.012 Sum_probs=56.3
Q ss_pred HHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHH
Q 018252 207 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 286 (359)
Q Consensus 207 ie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l 286 (359)
++.|.+.|.++|-..+-..+- +.++.++++++++++|+++|+++.+.|+.......+ .+++ -.+.+
T Consensus 23 i~~a~~~Gf~~IFTSL~~~e~--------~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg--~s~~----dl~~~ 88 (372)
T 2p0o_A 23 IKKMKALGFDGIFTSLHIPED--------DTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAG--FSFD----ELEPL 88 (372)
T ss_dssp HHHHHHTTCCEEEEEECCC-------------CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTT--CBTT----BCHHH
T ss_pred HHHHHHCCCCEEEccCCccCC--------ChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcC--CCHH----HHHHH
Confidence 788888999987654432221 234567889999999999999998877643221111 1111 22356
Q ss_pred HHCCcCEEEEcCCCCCCcHHHHHHH
Q 018252 287 HDMGCFEISLGDTIGVGTPGTVVPM 311 (359)
Q Consensus 287 ~~~Gad~I~L~DT~G~~~P~~v~~l 311 (359)
.++|++.|+|=+.+ ++.+++.+
T Consensus 89 ~~lGi~glRLD~Gf---~~~eia~l 110 (372)
T 2p0o_A 89 IELGVTGLRMDYGI---TIEQMAHA 110 (372)
T ss_dssp HHHTCCEEEECSSC---CHHHHHHH
T ss_pred HHcCCCEEEEcCCC---CHHHHHHH
Confidence 66799999998866 55555544
No 466
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=75.54 E-value=9.5 Score=35.27 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcC-CCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHc--CCCEEe
Q 018252 275 PPSKVAYVAKELHDMGCFEISLGD-TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQV--SPMHAK 351 (359)
Q Consensus 275 ~~e~l~~~a~~l~~~Gad~I~L~D-T~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~A--Ga~~ID 351 (359)
+++...+.++++.+.|||.|-+.= ...+-.++++.+++..+.+.. +++|.+ |++-- .-+.+|+++ |++.|+
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~-~~pisI---DT~~~--~v~~aAl~a~~Ga~iIN 96 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS-NLTLCL---DSTNI--KAIEAGLKKCKNRAMIN 96 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC-CSEEEE---ECSCH--HHHHHHHHHCSSCEEEE
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC-CCeEEE---eCCCH--HHHHHHHhhCCCCCEEE
Confidence 678888899999999999888863 233556788888888888754 468877 44433 345577777 999986
No 467
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=75.45 E-value=22 Score=33.59 Aligned_cols=54 Identities=22% Similarity=0.358 Sum_probs=46.8
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCc--HHHHHHHHHHHHHhCCCceEEEEeC
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLGDTIGVGT--PGTVVPMLEAVMAVVPVEKLAVHLH 329 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~--P~~v~~lv~~l~~~~p~~~L~~H~H 329 (359)
...++.+.+.++.+.+.|.|.|-+. |.|+ + .+.+.++++++++.++ +|+-.|+=
T Consensus 49 K~~~~~~~~~~~~~~~sGtDai~VG-S~~v-t~~~~~~~~~v~~ik~~~~-lPvil~fP 104 (286)
T 3vk5_A 49 KVPVTEAVEKAAELTRLGFAAVLLA-STDY-ESFESHMEPYVAAVKAATP-LPVVLHFP 104 (286)
T ss_dssp TSCHHHHHHHHHHHHHTTCSCEEEE-CSCC-SSHHHHHHHHHHHHHHHCS-SCEEEECC
T ss_pred CCCcHHHHHHHHHHHhcCCCEEEEc-cCCC-CcchHHHHHHHHHHHHhCC-CCEEEECC
Confidence 4678888889999999999999999 9988 6 8899999999999875 67777665
No 468
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=75.40 E-value=2.4 Score=38.50 Aligned_cols=75 Identities=11% Similarity=0.060 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHHHCCcC--EEEEcCCCCCCcHHH--HHHHHHHHHHhC-CCceEEEEeCCCCCcHHHHHHHHHHcCCC
Q 018252 274 IPPSKVAYVAKELHDMGCF--EISLGDTIGVGTPGT--VVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILISLQVSPM 348 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad--~I~L~DT~G~~~P~~--v~~lv~~l~~~~-p~~~L~~H~HNd~GLAlANalaAv~AGa~ 348 (359)
.|...+.+-++.+.++|+| .+-+.| |...|.- =.++++.+++.+ +..++.+|.|-+.--.. .-.+.++||+
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmD--g~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~--i~~~~~aGad 89 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMD--GHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQW--VKPMAVAGAN 89 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEB--SSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGG--HHHHHHHTCS
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecC--CCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHH--HHHHHHcCCC
Confidence 4666788889999999998 566677 5543322 124677888886 77789999886533322 3467789999
Q ss_pred EEec
Q 018252 349 HAKP 352 (359)
Q Consensus 349 ~ID~ 352 (359)
+|..
T Consensus 90 ~itv 93 (228)
T 3ovp_A 90 QYTF 93 (228)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
No 469
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=75.39 E-value=15 Score=34.52 Aligned_cols=143 Identities=10% Similarity=0.044 Sum_probs=77.4
Q ss_pred HHHHHHHHHHhCCCCEEEEec----cCCCCCcCCCC--CHHHHHHHhhhcCCCeEEEEeCCh-HhHHHHHHcCCCEEEEe
Q 018252 149 VKVELIRRLVSSGLPVVEATS----FVSPKWVPQLA--DARDVMEAVRDLEGARLPVLTPNL-KGFEAAIAAGAKEVAIF 221 (359)
Q Consensus 149 ~k~~ia~~L~~aGv~~IEvG~----fvspk~vPq~~--D~~ev~~~l~~~~~~~l~~l~~n~-~gie~a~~aGv~~V~i~ 221 (359)
..+++++.+.++|++.|-+.= +.+|+.+..+. -...+.+.++..+++.+..++... .-++...++|++.+.+-
T Consensus 180 ~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~g~~~~l~~l~~~g~d~~~~d 259 (338)
T 2eja_A 180 TVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDFSDTPVIYFFRGSSSFIDLAVDYRADALSVD 259 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEESSHHHHHHHHTTSCCSEEECC
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcCCcHHHHHHHHHcCCCEEEeC
Confidence 445667777889999987752 23332100000 001223333322466676777543 45677778899977652
Q ss_pred cCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHC-Cc-CEEEEcCC
Q 018252 222 ASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDM-GC-FEISLGDT 299 (359)
Q Consensus 222 ~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~-Ga-d~I~L~DT 299 (359)
- +.+.+++.+. .++.+.+++.... . ..+++.+.+.++++.+. |. ....+.-.
T Consensus 260 ~-----------~~dl~~~~~~----------~~~~l~Gn~dp~~--l---~gt~e~i~~~v~~~l~~~g~~~g~I~~~g 313 (338)
T 2eja_A 260 W-----------SVDIPELFKI----------YDKGFQGNLEPAV--L---YASEEVIEEKTLGLLRRIPVKTRYVFNLG 313 (338)
T ss_dssp T-----------TSCHHHHHHH----------CCSEEECCBCGGG--G---GSCHHHHHHHHHHHHTTCCCSSSEEBCBS
T ss_pred C-----------CCCHHHHHHh----------CCeEEEECCCHHH--h---cCCHHHHHHHHHHHHHHhCCCCCeEEeCC
Confidence 1 1222222211 1345555554311 1 24789999888888765 65 23444433
Q ss_pred CCC---CcHHHHHHHHHHHHH
Q 018252 300 IGV---GTPGTVVPMLEAVMA 317 (359)
Q Consensus 300 ~G~---~~P~~v~~lv~~l~~ 317 (359)
-|+ ..|+.+..+++++++
T Consensus 314 ~gi~~~~p~en~~a~v~~v~~ 334 (338)
T 2eja_A 314 HGLAPDMELEKVKYLVDLVKS 334 (338)
T ss_dssp SCCCTTSCHHHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHH
Confidence 343 456778888887775
No 470
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=75.31 E-value=16 Score=37.89 Aligned_cols=115 Identities=13% Similarity=0.053 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeeeecC-------------CCCCC-------------CC-------HHHHHHHHHH
Q 018252 239 DSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-------------PVEGA-------------IP-------PSKVAYVAKE 285 (359)
Q Consensus 239 e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~-------------~~~~r-------------~~-------~e~l~~~a~~ 285 (359)
+.++.++++++..+++|-++...|.+. |- |-+-+ .+ .+.+.+.++.
T Consensus 86 ~~~~~~~~~~~~vh~~g~~i~~Ql~h~-Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~ 164 (690)
T 3k30_A 86 QDLPALKRIADAIHEGGGLAGIELAHN-GMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRR 164 (690)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEccCC-cccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 446677788888899998887777531 10 00000 01 2567777888
Q ss_pred HHHCCcCEEEE--------------------cCCCCCCc---HHHHHHHHHHHHHhCC-CceEEEEe--CC--CCCcHHH
Q 018252 286 LHDMGCFEISL--------------------GDTIGVGT---PGTVVPMLEAVMAVVP-VEKLAVHL--HD--TYGQSLP 337 (359)
Q Consensus 286 l~~~Gad~I~L--------------------~DT~G~~~---P~~v~~lv~~l~~~~p-~~~L~~H~--HN--d~GLAlA 337 (359)
+.++|.|-|-| .|-.|-.. +..+.++++++++.++ +.+|++-. .+ +.|+...
T Consensus 165 a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~ 244 (690)
T 3k30_A 165 SIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITRE 244 (690)
T ss_dssp HHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHH
T ss_pred HHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHH
Confidence 88999998888 44445332 2367788999999875 34566544 22 2355433
Q ss_pred H---HHHHHHcCCCEEecee
Q 018252 338 N---ILISLQVSPMHAKPCF 354 (359)
Q Consensus 338 N---alaAv~AGa~~ID~tl 354 (359)
. ...+++.|++.++++.
T Consensus 245 ~~~~~~~~l~~~~d~~~v~~ 264 (690)
T 3k30_A 245 DIEGVLRELGELPDLWDFAM 264 (690)
T ss_dssp HHHHHHHHHTTSSSEEEEEC
T ss_pred HHHHHHHHHHhhcCEEEEec
Confidence 3 2344556899988764
No 471
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=75.19 E-value=27 Score=34.77 Aligned_cols=118 Identities=19% Similarity=0.021 Sum_probs=75.5
Q ss_pred hHHHHHHcCCCEEEEecCCc-hHHHHhhhc---CCHHHHHHHHHHHHHHHHhCCCcEEEE-EeeeecC------CCC---
Q 018252 206 GFEAAIAAGAKEVAIFASAS-EAFSKSNIN---CSIEDSLVRYRAVAHAAKVLSIPVRGY-VSCVVGC------PVE--- 271 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S-~~~~~~n~~---~t~~e~l~~i~~~i~~Ak~~G~~V~~~-is~~fg~------~~~--- 271 (359)
-++..+++|+--|+|-..+. +--+-+.-| .+.++.+++++.+...+...|.++.+. =+.+... .+.
T Consensus 168 tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~~d~ 247 (429)
T 1f8m_A 168 LQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDERDQ 247 (429)
T ss_dssp HHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCSTTTG
T ss_pred HHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhcccccccccccc
Confidence 35667789999999987652 211000012 368999999999988887777653211 1111110 000
Q ss_pred ----------C----CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 272 ----------G----AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 272 ----------~----r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
+ ....+..++-+++..+ |||.|.+. .|.-+++++.++.+.++..+|...|.+
T Consensus 248 ~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e--~~~~~~eei~~f~~~v~~~~P~~~La~ 313 (429)
T 1f8m_A 248 PFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWME--TGTPDLEAARQFSEAVKAEYPDQMLAY 313 (429)
T ss_dssp GGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEEC--CSSCCHHHHHHHHHHHHTTCTTCEEEE
T ss_pred ccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeC--CCCCCHHHHHHHHHHhcccCCCceeec
Confidence 0 1346777777777777 99998864 244689999999999998788655553
No 472
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=75.00 E-value=29 Score=32.20 Aligned_cols=135 Identities=16% Similarity=0.129 Sum_probs=77.1
Q ss_pred EEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCC--CCCH
Q 018252 199 VLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG--AIPP 276 (359)
Q Consensus 199 ~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~--r~~~ 276 (359)
+.+-+..+...|.+.|+++|-+....+. =|.|.. ...++.+. +...++|.+ + --|..+ .++.
T Consensus 6 vc~~s~~~a~~A~~~GAdRIELc~~L~~------GGlTPS--~g~i~~~~---~~~~ipv~v--M---IRPR~GdF~Ys~ 69 (256)
T 1twd_A 6 ICCYSMECALTAQQNGADRVELCAAPKE------GGLTPS--LGVLKSVR---QRVTIPVHP--I---IRPRGGDFCYSD 69 (256)
T ss_dssp EEESSHHHHHHHHHTTCSEEEECBCGGG------TCBCCC--HHHHHHHH---HHCCSCEEE--B---CCSSSSCSCCCH
T ss_pred EEeCCHHHHHHHHHcCCCEEEEcCCccc------CCCCCC--HHHHHHHH---HHcCCceEE--E---ECCCCCCCcCCH
Confidence 4556788899999999999999754221 123321 11222222 223566642 2 134333 4666
Q ss_pred HHHHHH---HHHHHHCCcCEEEEc--CCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcH-HHHHHHHHHcCCCEE
Q 018252 277 SKVAYV---AKELHDMGCFEISLG--DTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQVSPMHA 350 (359)
Q Consensus 277 e~l~~~---a~~l~~~Gad~I~L~--DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLA-lANalaAv~AGa~~I 350 (359)
+++..+ ++.+.++|++.|.+. +.-|...-..+.+|++... +.++.||-=-|.=-- ....-..++.|+++|
T Consensus 70 ~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~----~~~vTFHRAfD~~~d~~~ale~L~~lG~~rI 145 (256)
T 1twd_A 70 GEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAG----PLAVTFHRAFDMCANPLYTLNNLAELGIARV 145 (256)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT----TSEEEECGGGGGCSCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC----CCcEEEECchhccCCHHHHHHHHHHcCCCEE
Confidence 665554 456778999977654 5666666677777776443 356777643332111 223334456798887
Q ss_pred ece
Q 018252 351 KPC 353 (359)
Q Consensus 351 D~t 353 (359)
=++
T Consensus 146 LTS 148 (256)
T 1twd_A 146 LTS 148 (256)
T ss_dssp EEC
T ss_pred ECC
Confidence 543
No 473
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=74.68 E-value=14 Score=37.80 Aligned_cols=45 Identities=16% Similarity=0.052 Sum_probs=38.3
Q ss_pred HHHHHHHHHHH-HCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCc
Q 018252 277 SKVAYVAKELH-DMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVE 322 (359)
Q Consensus 277 e~l~~~a~~l~-~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~ 322 (359)
+++.+.++.+. +.|+|-++| |++....+..+.++.+.+++..|+.
T Consensus 290 ~~l~~~~~~Wi~~~GVDGfRl-D~~~~~~~~f~~~~~~~v~~~~p~~ 335 (601)
T 3edf_A 290 NYLIQNNIWWIEYAGLSGLRI-DTYGYSDGAFLTEYTRRLMAEYPRL 335 (601)
T ss_dssp HHHHHHHHHHHHHHTCSEEEE-SSGGGSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhhcCCCEEEe-eccccCCHHHHHHHHHHHHHhCCCe
Confidence 35667777777 899999997 9999999999999999999988763
No 474
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=74.46 E-value=36 Score=31.10 Aligned_cols=21 Identities=5% Similarity=0.175 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHhCCCcE
Q 018252 238 EDSLVRYRAVAHAAKVLSIPV 258 (359)
Q Consensus 238 ~e~l~~i~~~i~~Ak~~G~~V 258 (359)
++.++.+++.++.|+++|.++
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~ 130 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPA 130 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHHHHcCCCE
Confidence 344455555555555555543
No 475
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=74.39 E-value=12 Score=36.09 Aligned_cols=93 Identities=12% Similarity=-0.000 Sum_probs=56.0
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCC---CCCCcHHHHHHHHHHHHHhCC
Q 018252 244 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT---IGVGTPGTVVPMLEAVMAVVP 320 (359)
Q Consensus 244 i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT---~G~~~P~~v~~lv~~l~~~~p 320 (359)
+.+.++.+++.|+.+.+.+. + . ...+.++.+.++|++.|.+--. .+...|.....-+..+++.++
T Consensus 144 ~~~~i~~~~~~g~~v~~~v~-----~---~----~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~ 211 (393)
T 2qr6_A 144 LSERIAQVRDSGEIVAVRVS-----P---Q----NVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLD 211 (393)
T ss_dssp HHHHHHHHHHTTSCCEEEEC-----T---T----THHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCS
T ss_pred HHHHHHHHhhcCCeEEEEeC-----C---c----cHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcC
Confidence 34567788888888744332 1 1 2345667777899998865311 112233212223566777764
Q ss_pred CceEEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 321 VEKLAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 321 ~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
+++.+- ..+...-+..++++||+.|.++
T Consensus 212 -~pvi~g----gi~t~e~a~~~~~~Gad~i~vg 239 (393)
T 2qr6_A 212 -VPVIAG----GVNDYTTALHMMRTGAVGIIVG 239 (393)
T ss_dssp -SCEEEE----CCCSHHHHHHHHTTTCSEEEES
T ss_pred -CCEEEC----CcCCHHHHHHHHHcCCCEEEEC
Confidence 566662 2455677889999999999875
No 476
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=74.38 E-value=50 Score=29.83 Aligned_cols=116 Identities=9% Similarity=-0.015 Sum_probs=65.6
Q ss_pred HhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCC-CCCCC---CHHHHH
Q 018252 205 KGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP-VEGAI---PPSKVA 280 (359)
Q Consensus 205 ~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~-~~~r~---~~e~l~ 280 (359)
+-++.+.++|.+.|.+... .......... .+.++.+.++++|+++.. +.. +... ..+.. ..+++.
T Consensus 40 ~~l~~a~~~G~~~vEl~~~--~~~~~~~~~~-------~~~~~~~~l~~~gl~i~~-~~~-~~~~~~~~~~~~~~~~~~~ 108 (296)
T 2g0w_A 40 KRVKVAAENGFDGIGLRAE--NYVDALAAGL-------TDEDMLRILDEHNMKVTE-VEY-ITQWGTAEDRTAEQQKKEQ 108 (296)
T ss_dssp HHHHHHHHTTCSEEEEEHH--HHHHHHHTTC-------CHHHHHHHHHHTTCEEEE-EEC-BCCCSSTTTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCHH--HHHHHHhcCC-------cHHHHHHHHHHcCCceEe-ehh-hhccccCChHHHHHHHHHH
Confidence 3577888899999998753 1111100111 234556677889998743 221 3221 11111 134667
Q ss_pred HHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCC
Q 018252 281 YVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY 332 (359)
Q Consensus 281 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~ 332 (359)
+.++.+.++|+..|.+.-. +......+.+.++.+.+...++.|.+|.|+..
T Consensus 109 ~~i~~A~~lGa~~v~~g~~-~~~~~~~~~~~l~~l~~~a~Gv~l~lE~~~~~ 159 (296)
T 2g0w_A 109 TTFHMARLFGVKHINCGLL-EKIPEEQIIVALGELCDRAEELIIGLEFMPYS 159 (296)
T ss_dssp HHHHHHHHHTCCEEEECCC-SCCCHHHHHHHHHHHHHHHTTSEEEEECCTTS
T ss_pred HHHHHHHHcCCCEEEEcCC-CCCCHHHHHHHHHHHHHHhcCCEEEEEecCCC
Confidence 7888888999998877421 22223444455544444335689999998743
No 477
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=74.31 E-value=11 Score=36.53 Aligned_cols=57 Identities=11% Similarity=0.036 Sum_probs=41.4
Q ss_pred CCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcC--EEE--------EcCCCCCCcHHHHHHHHHHHHHh
Q 018252 255 SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF--EIS--------LGDTIGVGTPGTVVPMLEAVMAV 318 (359)
Q Consensus 255 G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad--~I~--------L~DT~G~~~P~~v~~lv~~l~~~ 318 (359)
|++|.++-++. .-..+++..++..+..+||+ .|- ++|..=.++|.++.++++.+++.
T Consensus 275 ~lpVi~dssHs-------~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~ir~i 341 (350)
T 1vr6_A 275 HLPILVDPSHS-------GGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKL 341 (350)
T ss_dssp SSCEEECHHHH-------HCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCC-------CcccchHHHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHHHHH
Confidence 77764433332 22445677788888889999 444 56999999999999999998863
No 478
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=74.27 E-value=36 Score=31.97 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=61.2
Q ss_pred CCCHHHHHHHHHHHHhCCCC--EEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEE--eCChHhHHHHHHcC-CCEE
Q 018252 144 TVPTGVKVELIRRLVSSGLP--VVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL--TPNLKGFEAAIAAG-AKEV 218 (359)
Q Consensus 144 ~~~~~~k~~ia~~L~~aGv~--~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l--~~n~~gie~a~~aG-v~~V 218 (359)
.++.++-+++++.|.+.|+. .||=-. .+ .|.+. ++.+++..++.+.+= +.+..++++.++.| ++.|
T Consensus 192 ~~~~~~a~~~~~~l~~~~i~~~~iE~P~--~~------~~~~~-~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v 262 (345)
T 2zad_A 192 GYTQKEAVEFARAVYQKGIDIAVYEQPV--RR------EDIEG-LKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYV 262 (345)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCSEEECCS--CT------TCHHH-HHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCCeeeeeCCC--Cc------ccHHH-HHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEE
Confidence 46889999999999999999 888332 11 34443 344443333433221 12567889888876 6777
Q ss_pred EEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcE
Q 018252 219 AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPV 258 (359)
Q Consensus 219 ~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V 258 (359)
.+-+. + .-+....++++.|+++|+.+
T Consensus 263 ~ik~~-------------~-GGit~~~~i~~~A~~~g~~~ 288 (345)
T 2zad_A 263 NIKLM-------------K-SGISDALAIVEIAESSGLKL 288 (345)
T ss_dssp EECHH-------------H-HHHHHHHHHHHHHHTTTCEE
T ss_pred EEecc-------------c-ccHHHHHHHHHHHHHcCCeE
Confidence 76321 2 34666778999999999987
No 479
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=74.27 E-value=29 Score=31.08 Aligned_cols=112 Identities=10% Similarity=0.085 Sum_probs=0.0
Q ss_pred HHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEE--------------eCCh-HhHHHHHHcCCC
Q 018252 152 ELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL--------------TPNL-KGFEAAIAAGAK 216 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l--------------~~n~-~gie~a~~aGv~ 216 (359)
+.++.+.++|++.||+. ...| +.+++.+.+++ .++++.++ .... +-++.|.+.|++
T Consensus 35 ~~l~~~~~~G~~~vEl~-----~~~~---~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 105 (301)
T 3cny_A 35 QLLSDIVVAGFQGTEVG-----GFFP---GPEKLNYELKL-RNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAP 105 (301)
T ss_dssp HHHHHHHHHTCCEECCC-----TTCC---CHHHHHHHHHH-TTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCEEEec-----CCCC---CHHHHHHHHHH-CCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCC
Q ss_pred EEEEec-------------C------CchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHH
Q 018252 217 EVAIFA-------------S------ASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 277 (359)
Q Consensus 217 ~V~i~~-------------s------~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e 277 (359)
.|.+.. + ..+.+ +...+.+..+.+.|+++|+++...-. +.....+++
T Consensus 106 ~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~---------~~~~~~l~~l~~~a~~~gv~l~lE~~-----~~~~~~~~~ 171 (301)
T 3cny_A 106 VAVVSEQTYTIQRSDTANIFKDKPYFTDKEW---------DEVCKGLNHYGEIAAKYGLKVAYHHH-----MGTGIQTKE 171 (301)
T ss_dssp EEEEEECTTCCTTCSSCCTTTCCCCCCHHHH---------HHHHHHHHHHHHHHHHTTCEEEEECC-----TTSSSCSHH
T ss_pred EEEecCCCccccCcccCCcccccccCcHHHH---------HHHHHHHHHHHHHHHHcCCEEEEecC-----CCcccCCHH
Q ss_pred HHHHHHHHH
Q 018252 278 KVAYVAKEL 286 (359)
Q Consensus 278 ~l~~~a~~l 286 (359)
.+.++++.+
T Consensus 172 ~~~~l~~~~ 180 (301)
T 3cny_A 172 ETDRLMANT 180 (301)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHHhC
No 480
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=73.99 E-value=14 Score=33.36 Aligned_cols=19 Identities=16% Similarity=0.135 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHCCcCEEE
Q 018252 277 SKVAYVAKELHDMGCFEIS 295 (359)
Q Consensus 277 e~l~~~a~~l~~~Gad~I~ 295 (359)
+.+.+.++.+.++|+..|.
T Consensus 113 ~~~~~~i~~A~~lG~~~v~ 131 (290)
T 2zvr_A 113 ERVVKHTEVAGMFGALVII 131 (290)
T ss_dssp HHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEE
Confidence 3444555555556666555
No 481
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=73.83 E-value=6.7 Score=36.73 Aligned_cols=165 Identities=17% Similarity=0.116 Sum_probs=86.3
Q ss_pred HHHHHHHhCCCCEEEEecc-CCCCCcCCCCCHHHHHHHhhhcCCCeEEEE---eCChHhHHHHHH-----cCCCEEEEec
Q 018252 152 ELIRRLVSSGLPVVEATSF-VSPKWVPQLADARDVMEAVRDLEGARLPVL---TPNLKGFEAAIA-----AGAKEVAIFA 222 (359)
Q Consensus 152 ~ia~~L~~aGv~~IEvG~f-vspk~vPq~~D~~ev~~~l~~~~~~~l~~l---~~n~~gie~a~~-----aGv~~V~i~~ 222 (359)
.+.+.+.++|.+.|=+..- +++. -.+.+.+++.++ +..+.-- |.+.++..++.+ .|-+.|.+-+
T Consensus 27 ~~~~ai~asg~eivtva~rR~~~~----~~~~~~~~~~i~---~~~~lpntaG~~taeeAv~~a~lare~~gt~~iKlEv 99 (268)
T 2htm_A 27 VMREAIAAAKAEVVTVSVRRVELK----APGHVGLLEALE---GVRLLPNTAGARTAEEAVRLARLGRLLTGERWVKLEV 99 (268)
T ss_dssp HHHHHHHHTTCSEEEEEEEECC-----------CHHHHTT---TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCC
T ss_pred HHHHHHHHhCCCEEEEEccccCCC----CCCcccHHHHHh---hhhccCcccCCCCHHHHHHHHHhhhHhcCcceeeeee
Confidence 3556788999999988742 2210 012234556654 3333222 234444433322 2555555432
Q ss_pred CCchHHHHhhhcCCHHHHHHHHHHHHHHHHh---CCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE-cC
Q 018252 223 SASEAFSKSNINCSIEDSLVRYRAVAHAAKV---LSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL-GD 298 (359)
Q Consensus 223 s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~---~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L-~D 298 (359)
- ++ .++ . +....+.++.|+. .|++|..|. .-++ .+++++.++|++.|.= +-
T Consensus 100 i-~d----~~~-l-----~pD~~~tv~aa~~L~k~Gf~Vlpy~----------~~D~----~~ak~l~~~G~~aVmPlg~ 154 (268)
T 2htm_A 100 I-PD----PTY-L-----LPDPLETLKAAERLIEEDFLVLPYM----------GPDL----VLAKRLAALGTATVMPLAA 154 (268)
T ss_dssp C-SC----TTT-T-----CCCHHHHHHHHHHHHHTTCEECCEE----------CSCH----HHHHHHHHHTCSCBEEBSS
T ss_pred c-cC----ccc-c-----CcCHHHHHHHHHHHHHCCCEEeecc----------CCCH----HHHHHHHhcCCCEEEecCc
Confidence 1 11 111 0 1112233444444 499873221 1244 6788888899987632 34
Q ss_pred CCCCCcHHHHHHHHHHHHHhCCC-ceEEEEeCCCCCcHH-HHHHHHHHcCCCEEec
Q 018252 299 TIGVGTPGTVVPMLEAVMAVVPV-EKLAVHLHDTYGQSL-PNILISLQVSPMHAKP 352 (359)
Q Consensus 299 T~G~~~P~~v~~lv~~l~~~~p~-~~L~~H~HNd~GLAl-ANalaAv~AGa~~ID~ 352 (359)
-+|...+-...++++.+++..++ +++-. +=|.+. +-+-.|++.||+-|=+
T Consensus 155 pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~----~GGI~tpsDAa~AmeLGAdgVlV 206 (268)
T 2htm_A 155 PIGSGWGVRTRALLELFAREKASLPPVVV----DAGLGLPSHAAEVMELGLDAVLV 206 (268)
T ss_dssp STTTCCCSTTHHHHHHHHHTTTTSSCBEE----ESCCCSHHHHHHHHHTTCCEEEE
T ss_pred cCcCCcccCCHHHHHHHHHhcCCCCeEEE----eCCCCCHHHHHHHHHcCCCEEEE
Confidence 46666444445567777773333 44444 556665 6788999999998643
No 482
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=73.79 E-value=11 Score=36.02 Aligned_cols=93 Identities=15% Similarity=0.112 Sum_probs=64.4
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCE-EEEcC-CCCCCcHHHHHHHHHHHHHhCCC
Q 018252 244 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFE-ISLGD-TIGVGTPGTVVPMLEAVMAVVPV 321 (359)
Q Consensus 244 i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~-I~L~D-T~G~~~P~~v~~lv~~l~~~~p~ 321 (359)
.+++++.|++.|+-|- +|. -.+.+.+..+.+.+.+.+... |.+.- +..++....+..++..+.+ ..
T Consensus 5 ~~~ll~~A~~~~yAV~-----AfN-----v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~--~~ 72 (305)
T 1rvg_A 5 GLEILKKAREEGYGVG-----AFN-----VNNMEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKE--AR 72 (305)
T ss_dssp HHHHHHHHHHHTCCEE-----EEE-----CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH--CS
T ss_pred HHHHHHHHHHCCCEEE-----EEe-----eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHh--CC
Confidence 4578889999998772 343 247789999999999988764 44432 1122334556677777666 45
Q ss_pred ceEEEEeCCCCCcHHHHHHHHHHcCCCEE
Q 018252 322 EKLAVHLHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 322 ~~L~~H~HNd~GLAlANalaAv~AGa~~I 350 (359)
+|+.+|. |-|....-+..|+++|.+-|
T Consensus 73 VPValHl--DHg~~~e~~~~ai~~GFtSV 99 (305)
T 1rvg_A 73 VPVAVHL--DHGSSYESVLRALRAGFTSV 99 (305)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHTTCSEE
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCee
Confidence 7888765 44556899999999998743
No 483
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=73.77 E-value=32 Score=34.31 Aligned_cols=145 Identities=12% Similarity=-0.003 Sum_probs=87.4
Q ss_pred hHHHHHHcCCCEEEEecCCc-hH---HHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEE-eeeec-------------
Q 018252 206 GFEAAIAAGAKEVAIFASAS-EA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYV-SCVVG------------- 267 (359)
Q Consensus 206 gie~a~~aGv~~V~i~~s~S-~~---~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~i-s~~fg------------- 267 (359)
-++..+++|+--|+|-..+. +- |...+.=.+.++..++++.+.+.+...|.++.+.- +.+.+
T Consensus 172 tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s~~d~rD~ 251 (435)
T 3lg3_A 172 LMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAADLLTSDCDPYDR 251 (435)
T ss_dssp HHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCGGGG
T ss_pred HHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCccccccccccccccc
Confidence 35667789999999987652 11 10000113688999999988887776675431111 10100
Q ss_pred ---CC-------CCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCC----
Q 018252 268 ---CP-------VEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG---- 333 (359)
Q Consensus 268 ---~~-------~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~G---- 333 (359)
.. +..+...+..++-+++..+ |||.|.+- .|.-+++++.++.+.++..+|...|.+-+--.+.
T Consensus 252 ~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E--~~~~~~~ei~~f~~~v~~~~P~~~La~~~sPsfnw~~~ 328 (435)
T 3lg3_A 252 EFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCE--TSTPDLALAKRFADAVHAQFPGKLLAYNCSPSFNWKKN 328 (435)
T ss_dssp GGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEEC--CSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHH
T ss_pred hhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEec--CCCCCHHHHHHHHHHhccccCCeEEEeCCCCCcccccc
Confidence 00 0001457788888887888 99999872 3567899999999999988897666654332332
Q ss_pred cH---HHH-HHHHHHcCCCEEece
Q 018252 334 QS---LPN-ILISLQVSPMHAKPC 353 (359)
Q Consensus 334 LA---lAN-alaAv~AGa~~ID~t 353 (359)
|. +++ .-.--++|+.++=.+
T Consensus 329 ~~d~~~~~f~~eLa~lG~~~v~~~ 352 (435)
T 3lg3_A 329 LTDQQIASFQDELSAMGYKYQFIT 352 (435)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEEET
T ss_pred CCHHHHHHHHHHHHHcCCcEEEeC
Confidence 11 111 223345787776544
No 484
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=73.76 E-value=67 Score=31.05 Aligned_cols=163 Identities=17% Similarity=0.156 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEE-eC--ChHhHHHHHHcCCCEEEEecCC
Q 018252 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL-TP--NLKGFEAAIAAGAKEVAIFASA 224 (359)
Q Consensus 148 ~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l-~~--n~~gie~a~~aGv~~V~i~~s~ 224 (359)
..-.+++.++.++|. +|.. + + ....+++.+.+++........+ ++ ..+-+++++++|++.|.+-.+.
T Consensus 53 vte~~lA~A~a~~Gg----~gvi-~-~----~~s~ee~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~ 122 (361)
T 3r2g_A 53 ITESNMANFMHSKGA----MGAL-H-R----FMTIEENIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCVDVAH 122 (361)
T ss_dssp TCSHHHHHHHHHTTC----EEBC-C-S----CSCHHHHHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred chHHHHHHHHHHcCC----CEEE-e-C----CCCHHHHHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 344778889999985 2221 1 1 1355777777765543222222 22 1256788899999977664332
Q ss_pred chHHHHhhhcCCHHHHHHHHHHHHHHHHhC--CCcEEE-EEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCC
Q 018252 225 SEAFSKSNINCSIEDSLVRYRAVAHAAKVL--SIPVRG-YVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIG 301 (359)
Q Consensus 225 S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~--G~~V~~-~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G 301 (359)
|.+ + .+.+.++++|+. ++.|.+ ++ .+++ .++.+.++|+|.|.+. .|
T Consensus 123 ---------G~~-~----~~~e~I~~ir~~~~~~~Vi~G~V-----------~T~e----~A~~a~~aGaD~I~Vg--~g 171 (361)
T 3r2g_A 123 ---------AHA-K----YVGKTLKSLRQLLGSRCIMAGNV-----------ATYA----GADYLASCGADIIKAG--IG 171 (361)
T ss_dssp ---------CSS-H----HHHHHHHHHHHHHTTCEEEEEEE-----------CSHH----HHHHHHHTTCSEEEEC--CS
T ss_pred ---------CCc-H----hHHHHHHHHHHhcCCCeEEEcCc-----------CCHH----HHHHHHHcCCCEEEEc--CC
Confidence 111 1 123445555554 666643 23 2443 4778889999999983 33
Q ss_pred CCcHHHH-------HHHHHHHHHhCCCc-eEEEEeCCCCCcH-HHHHHHHHHcCCCEEeceee
Q 018252 302 VGTPGTV-------VPMLEAVMAVVPVE-KLAVHLHDTYGQS-LPNILISLQVSPMHAKPCFT 355 (359)
Q Consensus 302 ~~~P~~v-------~~lv~~l~~~~p~~-~L~~H~HNd~GLA-lANalaAv~AGa~~ID~tl~ 355 (359)
.+.-... ...+..+++..... +|-. +=|.. -..+..|+.+||+.|-..-.
T Consensus 172 ~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVIA----dGGI~~~~di~kALa~GAd~V~iGr~ 230 (361)
T 3r2g_A 172 GGSVCSTRIKTGFGVPMLTCIQDCSRADRSIVA----DGGIKTSGDIVKALAFGADFVMIGGM 230 (361)
T ss_dssp SSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEEE----ESCCCSHHHHHHHHHTTCSEEEESGG
T ss_pred CCcCccccccCCccHHHHHHHHHHHHhCCCEEE----ECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 2211000 01233444332211 3322 33443 46778888999998765433
No 485
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=73.71 E-value=15 Score=34.46 Aligned_cols=77 Identities=21% Similarity=0.160 Sum_probs=48.7
Q ss_pred CCCCC-CHHHHHHHHHHHHHCCcCEEEEcC------CCCCCcHHHHHHHHHHHHHhC-CCceEEEEeCCCCCcHHHHHHH
Q 018252 270 VEGAI-PPSKVAYVAKELHDMGCFEISLGD------TIGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILI 341 (359)
Q Consensus 270 ~~~r~-~~e~l~~~a~~l~~~Gad~I~L~D------T~G~~~P~~v~~lv~~l~~~~-p~~~L~~H~HNd~GLAlANala 341 (359)
|+|++ +++..++-++++.+.|||.|-+.= ..-+..-+++.+++..+.... ++++|++ ||+--.+ +.+
T Consensus 22 DGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSI---DT~~~~V--a~~ 96 (270)
T 4hb7_A 22 DGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISV---DTFRSEV--AEA 96 (270)
T ss_dssp -----CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEE---ECSCHHH--HHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEE---ECCCHHH--HHH
Confidence 45664 778889999999999999998842 112223344554444433321 4678887 4666655 468
Q ss_pred HHHcCCCEEe
Q 018252 342 SLQVSPMHAK 351 (359)
Q Consensus 342 Av~AGa~~ID 351 (359)
|+++||++|+
T Consensus 97 al~aGa~iIN 106 (270)
T 4hb7_A 97 CLKLGVDMIN 106 (270)
T ss_dssp HHHHTCCEEE
T ss_pred HHHhccceec
Confidence 9999999997
No 486
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=73.64 E-value=48 Score=29.28 Aligned_cols=70 Identities=16% Similarity=0.108 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHH----HHHHHH-HCCcCEEEEcCCCCC----C-cHH
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY----VAKELH-DMGCFEISLGDTIGV----G-TPG 306 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~----~a~~l~-~~Gad~I~L~DT~G~----~-~P~ 306 (359)
++..++.+++.++.|+++|.++.. +. -|.. .++.+.+ +++.+. +.|+ .|.|--+.|. . +|.
T Consensus 83 r~~~~~~~~~~i~~a~~lGa~~vv-~h--~g~~-----~~~~~~~~l~~l~~~a~~~~gv-~l~lEn~~~~~~~~~~~~~ 153 (270)
T 3aam_A 83 WEKSVASLADDLEKAALLGVEYVV-VH--PGSG-----RPERVKEGALKALRLAGVRSRP-VLLVENTAGGGEKVGARFE 153 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEE-EC--CCBS-----CHHHHHHHHHHHHHHHTCCSSS-EEEEECCCCCTTBSCCSHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEE-EC--CCCC-----CHHHHHHHHHHHHHhhcccCCC-EEEEecCCCCCCccCCCHH
Confidence 566777888888888888876521 10 1111 2233333 333333 3455 5555444322 2 677
Q ss_pred HHHHHHHHH
Q 018252 307 TVVPMLEAV 315 (359)
Q Consensus 307 ~v~~lv~~l 315 (359)
++.++++.+
T Consensus 154 ~~~~l~~~v 162 (270)
T 3aam_A 154 ELAWLVADT 162 (270)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHHhC
Confidence 777776655
No 487
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=73.39 E-value=15 Score=33.51 Aligned_cols=22 Identities=9% Similarity=-0.002 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcE
Q 018252 237 IEDSLVRYRAVAHAAKVLSIPV 258 (359)
Q Consensus 237 ~~e~l~~i~~~i~~Ak~~G~~V 258 (359)
++++++.+++.++.|+++|.+.
T Consensus 89 r~~~~~~~~~~i~~A~~lGa~~ 110 (303)
T 3aal_A 89 FSLGVDFLRAEIERTEAIGAKQ 110 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHHHHHcCCCE
Confidence 4567778888888888888775
No 488
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=73.38 E-value=12 Score=35.28 Aligned_cols=62 Identities=8% Similarity=-0.122 Sum_probs=45.6
Q ss_pred HHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEecee
Q 018252 282 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKPCF 354 (359)
Q Consensus 282 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~tl 354 (359)
-++++.++|+|.|.| |+ ++|+++++.++.++. .++|++=+ |.-..|+.+-.+.|+|+|.+.-
T Consensus 210 ea~eAl~aGaD~I~L-Dn---~~~~~l~~av~~~~~---~v~ieaSG----GIt~~~i~~~a~tGVD~IsvGa 271 (287)
T 3tqv_A 210 ELNQAIAAKADIVML-DN---FSGEDIDIAVSIARG---KVALEVSG----NIDRNSIVAIAKTGVDFISVGA 271 (287)
T ss_dssp HHHHHHHTTCSEEEE-ES---CCHHHHHHHHHHHTT---TCEEEEES----SCCTTTHHHHHTTTCSEEECSH
T ss_pred HHHHHHHcCCCEEEE-cC---CCHHHHHHHHHhhcC---CceEEEEC----CCCHHHHHHHHHcCCCEEEECh
Confidence 345566789999988 55 789999999987763 45666655 4455677777889999998753
No 489
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=73.36 E-value=5.2 Score=37.50 Aligned_cols=57 Identities=16% Similarity=0.134 Sum_probs=42.3
Q ss_pred CCCHHHHHHHHHHHHHCCcCE----EEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeC
Q 018252 273 AIPPSKVAYVAKELHDMGCFE----ISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLH 329 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~----I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~H 329 (359)
+++|+++++-+.++.++||.. ++=.|-.....|+.++++++.||++.|++.|.+-..
T Consensus 26 PvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg 86 (275)
T 3no5_A 26 PITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTG 86 (275)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCC
T ss_pred CCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCC
Confidence 478888888888888888874 344564456678888888888888888777766544
No 490
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=73.23 E-value=30 Score=34.61 Aligned_cols=140 Identities=15% Similarity=0.150 Sum_probs=85.3
Q ss_pred CHHHHHHHhh---hcCCCeEEEEeCChHhHHHHHHcCCCEEEEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCc
Q 018252 181 DARDVMEAVR---DLEGARLPVLTPNLKGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP 257 (359)
Q Consensus 181 D~~ev~~~l~---~~~~~~l~~l~~n~~gie~a~~aGv~~V~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~ 257 (359)
|.+.+...++ +.-++.++..+.+.+-++.+++++.+...+.-++++ ++++.+.+.|+++|..
T Consensus 139 dpe~~~~vVk~V~e~~dvPL~IDS~dpevleaALea~a~~~plI~sat~---------------dn~e~m~~lAa~y~~p 203 (446)
T 4djd_C 139 DPAAFKAAVASVAAATQLNLVLMADDPDVLKEALAGVADRKPLLYAATG---------------ANYEAMTALAKENNCP 203 (446)
T ss_dssp STHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHGGGGGGCCEEEEECT---------------TTHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHhCCCCEEEecCCHHHHHHHHHhhcCcCCeeEecch---------------hhHHHHHHHHHHcCCc
Confidence 4455544444 445677777778889999999987664444333221 2345677788889998
Q ss_pred EEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHh----------CCCceEEEE
Q 018252 258 VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAV----------VPVEKLAVH 327 (359)
Q Consensus 258 V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~----------~p~~~L~~H 327 (359)
+.+ .. + +.+.+.++.+.+.++|++.|.| |....+. ....+....+|+. +| .|.+-
T Consensus 204 Vi~-----~~-~-----dl~~lkelv~~a~~~GI~~IvL-DPG~~g~-~~t~~~~~~iRr~AL~~~d~~LgyP--vi~~~ 268 (446)
T 4djd_C 204 LAV-----YG-N-----GLEELAELVDKIVALGHKQLVL-DPGARET-SRAIADFTQIRRLAIKKRFRSFGYP--IIALT 268 (446)
T ss_dssp EEE-----EC-S-----SHHHHHHHHHHHHHTTCCCEEE-ECCCCSH-HHHHHHHHHHHHHHHHSCCGGGCSC--BEEEC
T ss_pred EEE-----Ee-c-----cHHHHHHHHHHHHHCCCCcEEE-CCCchhH-HHHHHHHHHHHHHhhhccCcccCCC--EEecc
Confidence 742 21 1 7889999999999999988865 4432222 2222222223432 24 24455
Q ss_pred eCCCCCcHHHHHHHHHHcCCCEE
Q 018252 328 LHDTYGQSLPNILISLQVSPMHA 350 (359)
Q Consensus 328 ~HNd~GLAlANalaAv~AGa~~I 350 (359)
...|-=+-..-|...+..|+++|
T Consensus 269 sr~d~~~E~t~A~~~i~kga~Iv 291 (446)
T 4djd_C 269 TAANPLDEVLQAVNYVTKYASLV 291 (446)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEE
T ss_pred CCccHHHHHHHHHHHHHcCCeEE
Confidence 55553344444467778888876
No 491
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=73.12 E-value=13 Score=35.41 Aligned_cols=86 Identities=12% Similarity=-0.090 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCce
Q 018252 244 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEK 323 (359)
Q Consensus 244 i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~ 323 (359)
+.++++.+|+....+...|.+. +.+++.+.++ +|+|.|.| |. ++|+++++.++.++ +.+.
T Consensus 194 i~~Av~~ar~~~p~~kIeVEv~---------tl~e~~eAl~----aGaDiImL-Dn---~s~~~l~~av~~~~---~~v~ 253 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAIECD---------NISQVEESLS----NNVDMILL-DN---MSISEIKKAVDIVN---GKSV 253 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEEEES---------SHHHHHHHHH----TTCSEEEE-ES---CCHHHHHHHHHHHT---TSSE
T ss_pred HHHHHHHHHHhCCCCCEEEEEC---------CHHHHHHHHH----cCCCEEEE-CC---CCHHHHHHHHHhhc---CceE
Q ss_pred EEEEeCCCCCcHHHHHHHHHHcCCCEEece
Q 018252 324 LAVHLHDTYGQSLPNILISLQVSPMHAKPC 353 (359)
Q Consensus 324 L~~H~HNd~GLAlANalaAv~AGa~~ID~t 353 (359)
|++=+ |.-..|+.+=.+.|+|+|.++
T Consensus 254 leaSG----GIt~~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 254 LEVSG----CVNIRNVRNIALTGVDYISIG 279 (300)
T ss_dssp EEEES----SCCTTTHHHHHTTTCSEEECG
T ss_pred EEEEC----CCCHHHHHHHHHcCCCEEEeC
No 492
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=73.05 E-value=33 Score=32.97 Aligned_cols=114 Identities=15% Similarity=0.156 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhcCCCeEEEEeC--ChHhHHHHHHcC-CCEE
Q 018252 142 KNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP--NLKGFEAAIAAG-AKEV 218 (359)
Q Consensus 142 ~~~~~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~~~~~l~~l~~--n~~gie~a~~aG-v~~V 218 (359)
+..++.++-+++++.|.+.|+..|| -|-..+..+-++.+++..++.+.+==. +..+++++++.| ++.|
T Consensus 202 n~~~~~~~A~~~~~~l~~~~i~~iE---------qP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 272 (383)
T 3i4k_A 202 NARWDRRTALHYLPILAEAGVELFE---------QPTPADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVI 272 (383)
T ss_dssp TTCSCHHHHHHHHHHHHHTTCCEEE---------SCSCTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEE---------CCCChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEE
Q ss_pred EEecCCchHHHHhhhcCCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHH
Q 018252 219 AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 283 (359)
Q Consensus 219 ~i~~s~S~~~~~~n~~~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a 283 (359)
.+-+. +.|- +....+++..|+++|+.+ ..++..++.......+.++
T Consensus 273 ~~k~~--------~~GG-----it~~~~ia~~A~~~gi~~------~~~~~~es~i~~aa~~hla 318 (383)
T 3i4k_A 273 ALKTT--------KHGG-----LLESKKIAAIAEAGGLAC------HGATSLEGPIGTAASLQFA 318 (383)
T ss_dssp EECTT--------TTTS-----HHHHHHHHHHHHHTTCEE------EECCSCCCHHHHHHHHHHH
T ss_pred EEccc--------ccCC-----HHHHHHHHHHHHHcCCeE------EeCCCCccHHHHHHHHHHH
No 493
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=73.05 E-value=14 Score=35.23 Aligned_cols=109 Identities=12% Similarity=0.035 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHH
Q 018252 235 CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEA 314 (359)
Q Consensus 235 ~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~ 314 (359)
++.++.++ .++.+++.|++- +++. -|.......+.+++.++++.+.+.|.. |.+ |.|..+++.+..|.++
T Consensus 99 ~s~eei~~----~~~~~~~~g~~~-i~~~--gg~~~p~~~~~~~l~~ll~~ik~~g~~-i~~--t~G~l~~e~l~~L~~a 168 (369)
T 1r30_A 99 MEVEQVLE----SARKAKAAGSTR-FCMG--AAWKNPHERDMPYLEQMVQGVKAMGLE-ACM--TLGTLSESQAQRLANA 168 (369)
T ss_dssp CCHHHHHH----HHHHHHHTTCSE-EEEE--ECCSSCCTTTHHHHHHHHHHHHHTTSE-EEE--ECSSCCHHHHHHHHHH
T ss_pred CCHHHHHH----HHHHHHHcCCcE-EEEE--eCCCCCCcCCHHHHHHHHHHHHHcCCe-EEE--ecCCCCHHHHHHHHHC
Confidence 45655554 444555677753 2332 221112236789999999999988874 453 8998887766655443
Q ss_pred HHHhCCCceEEEEe----------CCCCCcHHHHHHHHHHcCCCEEeceeeec
Q 018252 315 VMAVVPVEKLAVHL----------HDTYGQSLPNILISLQVSPMHAKPCFTFA 357 (359)
Q Consensus 315 l~~~~p~~~L~~H~----------HNd~GLAlANalaAv~AGa~~ID~tl~~~ 357 (359)
.+..+.+++.. ..++...+.+...+.++|. .|.++++++
T Consensus 169 ---Gvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi-~v~~~~I~G 217 (369)
T 1r30_A 169 ---GLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGI-KVCSGGIVG 217 (369)
T ss_dssp ---CCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHC-EEECCEEEC
T ss_pred ---CCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCC-eeeeeeEee
Confidence 12223333332 1233445666667778898 677777765
No 494
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=73.03 E-value=3.6 Score=40.12 Aligned_cols=77 Identities=9% Similarity=0.061 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCCCCCcHH-------HHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcC
Q 018252 274 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPG-------TVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVS 346 (359)
Q Consensus 274 ~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~-------~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AG 346 (359)
++++.+.+.++.+ ++|+..|.|.+.-+...|. .+.+.++.+++.++ +|+.+-. --.|+...-+..+.++|
T Consensus 135 ~~~~~~~~av~~~-~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~-vPVivK~-vG~g~s~~~A~~l~~aG 211 (368)
T 3vkj_A 135 YGLKEFQDAIQMI-EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELS-VPIIVKE-SGNGISMETAKLLYSYG 211 (368)
T ss_dssp CCHHHHHHHHHHT-TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCS-SCEEEEC-SSSCCCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHh-cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcC-CCEEEEe-CCCCCCHHHHHHHHhCC
Confidence 6778877777766 6777778776543333231 37888999999876 5787763 22345678889999999
Q ss_pred CCEEece
Q 018252 347 PMHAKPC 353 (359)
Q Consensus 347 a~~ID~t 353 (359)
|+.|+++
T Consensus 212 ad~I~V~ 218 (368)
T 3vkj_A 212 IKNFDTS 218 (368)
T ss_dssp CCEEECC
T ss_pred CCEEEEe
Confidence 9999874
No 495
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=73.03 E-value=8.5 Score=36.37 Aligned_cols=74 Identities=12% Similarity=-0.003 Sum_probs=50.8
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCCCCC---cH--HHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCC
Q 018252 273 AIPPSKVAYVAKELHDMGCFEISLGDTIGVG---TP--GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSP 347 (359)
Q Consensus 273 r~~~e~l~~~a~~l~~~Gad~I~L~DT~G~~---~P--~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa 347 (359)
..+.++-.++++.+.++|++.|-+. .+.. .| .+..++++.+.+. +++++..+.-| ......|+++|+
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g--~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~-----~~~i~~a~~~g~ 95 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEIT--SFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPN-----QRGLENALEGGI 95 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEE--ECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCS-----HHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEC--CCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCC-----HHhHHHHHhCCc
Confidence 4688999999999999999988774 1111 12 2333445554443 67788887744 456778899999
Q ss_pred CEEecee
Q 018252 348 MHAKPCF 354 (359)
Q Consensus 348 ~~ID~tl 354 (359)
+.|...+
T Consensus 96 ~~v~i~~ 102 (307)
T 1ydo_A 96 NEACVFM 102 (307)
T ss_dssp SEEEEEE
T ss_pred CEEEEEe
Confidence 9988654
No 496
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=73.01 E-value=23 Score=34.62 Aligned_cols=45 Identities=13% Similarity=-0.004 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHHHCCcC--EE--------EEcCCCCCCcHHHHHHHHHHHHHhC
Q 018252 275 PPSKVAYVAKELHDMGCF--EI--------SLGDTIGVGTPGTVVPMLEAVMAVV 319 (359)
Q Consensus 275 ~~e~l~~~a~~l~~~Gad--~I--------~L~DT~G~~~P~~v~~lv~~l~~~~ 319 (359)
..+++..++..+..+||+ .| .++|..=.++|.++.++++.+++..
T Consensus 324 ~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i~~i~ 378 (385)
T 3nvt_A 324 RKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAILASN 378 (385)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHHHHHH
Confidence 345677899999999999 44 4599999999999999999999753
No 497
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=72.90 E-value=11 Score=37.20 Aligned_cols=66 Identities=15% Similarity=0.032 Sum_probs=49.9
Q ss_pred HHHHHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEEEeCCCCCcHHHHHHHHHHcCCCEEec
Q 018252 280 AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQVSPMHAKP 352 (359)
Q Consensus 280 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~H~HNd~GLAlANalaAv~AGa~~ID~ 352 (359)
.+.++.+.++|++.|.|-=+. ..|..+.++++.+++.++ +++.++.= ....-+..++++|||.|-+
T Consensus 146 ~e~~~~lveaGvdvIvldta~--G~~~~~~e~I~~ik~~~~-i~Vi~g~V----~t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH--GHSLNIIRTLKEIKSKMN-IDVIVGNV----VTEEATKELIENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC--CSBHHHHHHHHHHHTTCC-CEEEEEEE----CSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCC--CCcccHHHHHHHHHhcCC-CeEEEeec----CCHHHHHHHHHcCCCEEEE
Confidence 577888999999998763233 368888999999999884 56665311 2356778999999999987
No 498
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=72.69 E-value=12 Score=36.19 Aligned_cols=82 Identities=17% Similarity=0.176 Sum_probs=53.9
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEE---------cCCCCCC--cHH-HHHHHHHHHHHhCCCceEE---------EEeCC
Q 018252 272 GAIPPSKVAYVAKELHDMGCFEISL---------GDTIGVG--TPG-TVVPMLEAVMAVVPVEKLA---------VHLHD 330 (359)
Q Consensus 272 ~r~~~e~l~~~a~~l~~~Gad~I~L---------~DT~G~~--~P~-~v~~lv~~l~~~~p~~~L~---------~H~HN 330 (359)
.|++.+.+.+.++++.+.|+..|.| +|..|.. .|. -+.+-++.+|+.+|++-|- -|+|+
T Consensus 64 ~r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~VitDvcLc~YT~HGHc 143 (342)
T 1h7n_A 64 NRIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSHGHC 143 (342)
T ss_dssp EEECHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTTCCS
T ss_pred eeeCHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeecccccCCCce
Confidence 3567888888888888888775443 3344443 343 3667789999999974222 28997
Q ss_pred CCC--cH----------H-HHHHHHHHcCCCEEece
Q 018252 331 TYG--QS----------L-PNILISLQVSPMHAKPC 353 (359)
Q Consensus 331 d~G--LA----------l-ANalaAv~AGa~~ID~t 353 (359)
-.= -| + --++.-.+|||++|--|
T Consensus 144 Gil~~~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPS 179 (342)
T 1h7n_A 144 GVLYDDGTINRERSVSRLAAVAVNYAKAGAHCVAPS 179 (342)
T ss_dssp SCBCTTSSBCHHHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred eEECCCCcCccHHHHHHHHHHHHHHHHcCCCeeecc
Confidence 432 12 1 23777889999998543
No 499
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=72.68 E-value=29 Score=34.34 Aligned_cols=155 Identities=19% Similarity=0.144 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEeccCCCCCcCCCCCHHHHHHHhhhc--CCCeEEEEeCChHhHHHHH------HcCCCE
Q 018252 146 PTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL--EGARLPVLTPNLKGFEAAI------AAGAKE 217 (359)
Q Consensus 146 ~~~~k~~ia~~L~~aGv~~IEvG~fvspk~vPq~~D~~ev~~~l~~~--~~~~l~~l~~n~~gie~a~------~aGv~~ 217 (359)
..+.-++-+..|.++|.+.|-+.. |.+.+++.+.+..+++ .+..+.....=..+...|+ +.+++.
T Consensus 36 Dv~aTv~QI~~L~~aG~eiVRvaV-------p~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dk 108 (406)
T 4g9p_A 36 DVEATTAQVLELHRAGSEIVRLTV-------NDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDK 108 (406)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC-------CSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSE
T ss_pred cHHHHHHHHHHHHHcCCCEEEEec-------CCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhh
Q ss_pred EEEecCCchHHHHhhhc--CCHHHHHHHHHHHHHHHHhCCCcEEEEEeeeecCCCCCCCCHHHHHHH-------------
Q 018252 218 VAIFASASEAFSKSNIN--CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYV------------- 282 (359)
Q Consensus 218 V~i~~s~S~~~~~~n~~--~t~~e~l~~i~~~i~~Ak~~G~~V~~~is~~fg~~~~~r~~~e~l~~~------------- 282 (359)
+++ |.| -.....-+++.++++.|+++|..+|.-+- .|..+.+.+.++
T Consensus 109 iRI-----------NPGNig~~~k~~e~~~~vv~~ak~~~~pIRIGVN-------~GSL~~~ll~k~~d~~~~~~~p~~~ 170 (406)
T 4g9p_A 109 FRI-----------NPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGAN-------WGSLDPALLTELMDRNASRPEPKSA 170 (406)
T ss_dssp EEE-----------CTTSSCSTHHHHHHHHHHHHHHHHHTCCEEEEEE-------GGGCCHHHHHHHHHHHHHSSSCCCH
T ss_pred ccc-----------CccccCccccHHHHHHHHHHHHHHccCCceeccc-------cccccHHHHHHhhcccccCCCccch
Q ss_pred ---------------HHHHHHCCcCEEEEcCCCCCCcHHHHHHHHHHHHHhCCCceEEE
Q 018252 283 ---------------AKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV 326 (359)
Q Consensus 283 ---------------a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~~L~~ 326 (359)
++.+.+.|-..-.+.=++=...+..+.+..+.+.+..+ -||++
T Consensus 171 ~~v~~eamVeSAl~~~~~~~~~~f~~~~iviS~KaSdv~~~i~aYr~la~~~d-yPLHL 228 (406)
T 4g9p_A 171 HEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARRTQ-APLHL 228 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEECSSHHHHHHHHHHHHHHCC-SCBEE
T ss_pred hhhHHHHHHHHHHHHHHHHHHcCCChhheEEEeecCCHHHHHHHHHHHHHhCC-CCcee
No 500
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=72.63 E-value=13 Score=37.11 Aligned_cols=44 Identities=11% Similarity=0.111 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCCCC------------CCcHHHHHHHHHHHHHh
Q 018252 275 PPSKVAYVAKELHDMGCFEISLGDTIG------------VGTPGTVVPMLEAVMAV 318 (359)
Q Consensus 275 ~~e~l~~~a~~l~~~Gad~I~L~DT~G------------~~~P~~v~~lv~~l~~~ 318 (359)
++..+.+.++.+.++|+--|.|-|.++ +..+++..+.|++.++.
T Consensus 165 ~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A 220 (435)
T 3lg3_A 165 GVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLA 220 (435)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHH
Confidence 445788999999999999999999985 23456666667666643
Done!