Query 018253
Match_columns 359
No_of_seqs 195 out of 1232
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 12:21:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018253.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018253hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dpp_A DHDPS 2, dihydrodipicol 100.0 3.3E-86 1.1E-90 647.0 33.5 344 16-359 14-360 (360)
2 3si9_A DHDPS, dihydrodipicolin 100.0 1E-69 3.6E-74 524.8 34.0 279 58-337 22-313 (315)
3 3flu_A DHDPS, dihydrodipicolin 100.0 1.4E-69 4.6E-74 520.3 33.7 278 58-336 7-296 (297)
4 3qze_A DHDPS, dihydrodipicolin 100.0 9.3E-70 3.2E-74 525.1 32.7 279 58-337 23-313 (314)
5 1xky_A Dihydrodipicolinate syn 100.0 1.6E-69 5.6E-74 520.6 33.9 278 57-335 11-300 (301)
6 3tak_A DHDPS, dihydrodipicolin 100.0 1.4E-69 4.9E-74 518.8 30.8 277 59-336 2-290 (291)
7 3eb2_A Putative dihydrodipicol 100.0 1.3E-69 4.6E-74 521.0 30.7 277 58-335 4-292 (300)
8 3cpr_A Dihydrodipicolinate syn 100.0 4.1E-69 1.4E-73 518.5 33.8 283 49-336 9-303 (304)
9 3s5o_A 4-hydroxy-2-oxoglutarat 100.0 2.8E-69 9.6E-74 520.4 32.0 282 54-336 10-306 (307)
10 3na8_A Putative dihydrodipicol 100.0 2.8E-69 9.7E-74 521.9 31.8 278 58-336 24-314 (315)
11 3m5v_A DHDPS, dihydrodipicolin 100.0 2.7E-69 9.3E-74 519.2 31.1 277 58-337 8-299 (301)
12 2ojp_A DHDPS, dihydrodipicolin 100.0 3.2E-69 1.1E-73 516.7 31.3 277 59-336 2-291 (292)
13 3l21_A DHDPS, dihydrodipicolin 100.0 2.1E-69 7.2E-74 520.5 30.0 279 58-337 15-303 (304)
14 3h5d_A DHDPS, dihydrodipicolin 100.0 3.5E-69 1.2E-73 520.4 31.4 281 56-338 5-298 (311)
15 2ehh_A DHDPS, dihydrodipicolin 100.0 7.4E-69 2.5E-73 514.5 32.9 277 59-337 2-291 (294)
16 3a5f_A Dihydrodipicolinate syn 100.0 4.7E-69 1.6E-73 515.2 31.4 276 59-336 3-290 (291)
17 2rfg_A Dihydrodipicolinate syn 100.0 6.5E-69 2.2E-73 515.6 31.9 278 59-338 2-291 (297)
18 1f6k_A N-acetylneuraminate lya 100.0 1.5E-68 5E-73 512.3 32.4 276 58-334 3-291 (293)
19 2yxg_A DHDPS, dihydrodipicolin 100.0 1.8E-68 6E-73 510.8 32.5 274 59-336 2-288 (289)
20 1o5k_A DHDPS, dihydrodipicolin 100.0 2E-68 6.8E-73 514.2 31.4 276 59-336 14-305 (306)
21 2vc6_A MOSA, dihydrodipicolina 100.0 2.8E-68 9.7E-73 510.0 31.7 277 59-337 2-291 (292)
22 3daq_A DHDPS, dihydrodipicolin 100.0 2.2E-68 7.6E-73 510.8 30.9 276 59-336 4-290 (292)
23 2wkj_A N-acetylneuraminate lya 100.0 5.3E-68 1.8E-72 510.6 31.0 276 58-335 11-300 (303)
24 2r8w_A AGR_C_1641P; APC7498, d 100.0 5.1E-68 1.8E-72 516.4 31.2 278 59-337 35-328 (332)
25 2v9d_A YAGE; dihydrodipicolini 100.0 5.9E-68 2E-72 517.9 31.4 278 59-337 32-327 (343)
26 3b4u_A Dihydrodipicolinate syn 100.0 4.1E-66 1.4E-70 495.5 29.0 271 60-335 5-289 (294)
27 3d0c_A Dihydrodipicolinate syn 100.0 1.5E-65 5.1E-70 495.8 31.9 276 57-338 10-304 (314)
28 3fkr_A L-2-keto-3-deoxyarabona 100.0 3.9E-65 1.3E-69 491.8 33.1 276 58-337 8-303 (309)
29 3qfe_A Putative dihydrodipicol 100.0 2E-65 7E-70 495.5 30.7 277 58-337 10-313 (318)
30 1w3i_A EDA, 2-keto-3-deoxy glu 100.0 3.2E-65 1.1E-69 489.1 31.5 268 60-335 1-282 (293)
31 2pcq_A Putative dihydrodipicol 100.0 6E-66 2.1E-70 491.9 23.5 268 62-337 2-282 (283)
32 2r91_A 2-keto-3-deoxy-(6-phosp 100.0 4.8E-65 1.6E-69 486.3 29.6 266 60-334 1-280 (286)
33 3e96_A Dihydrodipicolinate syn 100.0 1.1E-64 3.8E-69 490.1 32.4 276 58-338 11-304 (316)
34 3dz1_A Dihydrodipicolinate syn 100.0 1.2E-64 4.2E-69 489.2 32.5 276 58-337 8-305 (313)
35 2hmc_A AGR_L_411P, dihydrodipi 100.0 7.4E-65 2.5E-69 495.9 29.5 270 59-335 27-323 (344)
36 2nuw_A 2-keto-3-deoxygluconate 100.0 2E-64 6.9E-69 482.5 30.3 266 60-335 1-280 (288)
37 4dnh_A Uncharacterized protein 97.9 0.00098 3.3E-08 63.2 18.9 218 74-293 57-319 (396)
38 3ih1_A Methylisocitrate lyase; 97.4 0.0064 2.2E-07 57.7 17.3 131 62-206 92-235 (305)
39 2qjg_A Putative aldolase MJ040 97.4 0.0001 3.4E-09 68.5 4.8 180 62-259 24-239 (273)
40 3eoo_A Methylisocitrate lyase; 97.3 0.013 4.3E-07 55.5 18.1 123 77-206 96-231 (298)
41 3fa4_A 2,3-dimethylmalate lyas 97.3 0.014 4.6E-07 55.4 18.3 124 77-206 93-231 (302)
42 3lye_A Oxaloacetate acetyl hyd 97.3 0.016 5.4E-07 55.0 18.5 124 77-206 101-239 (307)
43 1f8m_A Isocitrate lyase, ICL; 97.2 0.0095 3.2E-07 59.0 16.7 125 77-205 161-332 (429)
44 3i4e_A Isocitrate lyase; struc 97.2 0.014 4.9E-07 57.7 17.5 124 77-204 165-335 (439)
45 1s2w_A Phosphoenolpyruvate pho 97.2 0.018 6.2E-07 54.4 17.4 134 62-206 82-230 (295)
46 1zlp_A PSR132, petal death pro 97.1 0.019 6.5E-07 54.8 16.6 123 77-206 114-249 (318)
47 2hjp_A Phosphonopyruvate hydro 97.0 0.013 4.3E-07 55.4 14.2 131 77-217 88-234 (290)
48 3lg3_A Isocitrate lyase; conse 96.9 0.026 8.9E-07 55.8 16.2 124 77-204 165-335 (435)
49 2ze3_A DFA0005; organic waste 96.9 0.016 5.5E-07 54.2 13.8 121 76-206 89-224 (275)
50 1xg4_A Probable methylisocitra 96.8 0.054 1.9E-06 51.1 16.6 124 76-206 91-227 (295)
51 2ekc_A AQ_1548, tryptophan syn 96.8 0.084 2.9E-06 48.7 17.6 182 61-259 17-236 (262)
52 2qiw_A PEP phosphonomutase; st 96.6 0.015 5E-07 53.9 11.5 117 82-206 96-228 (255)
53 3eol_A Isocitrate lyase; seatt 96.6 0.046 1.6E-06 54.0 15.4 112 77-192 158-317 (433)
54 1qop_A Tryptophan synthase alp 96.3 0.2 6.8E-06 46.2 17.3 185 60-260 16-237 (268)
55 3b8i_A PA4872 oxaloacetate dec 96.3 0.039 1.3E-06 51.9 12.5 122 77-206 95-226 (287)
56 1rd5_A Tryptophan synthase alp 95.9 0.096 3.3E-06 48.0 12.8 174 73-260 26-233 (262)
57 1jub_A Dihydroorotate dehydrog 95.7 0.028 9.5E-07 52.9 8.5 86 76-165 169-276 (311)
58 1w8s_A FBP aldolase, fructose- 95.7 0.16 5.4E-06 47.0 13.4 161 77-257 39-231 (263)
59 1tv5_A Dhodehase, dihydroorota 95.6 0.068 2.3E-06 53.2 11.2 86 76-165 308-407 (443)
60 3i65_A Dihydroorotate dehydrog 95.6 0.051 1.8E-06 53.6 10.1 86 76-165 280-379 (415)
61 3vnd_A TSA, tryptophan synthas 95.5 1.1 3.8E-05 41.4 18.5 175 72-259 25-237 (267)
62 1f76_A Dihydroorotate dehydrog 95.5 0.07 2.4E-06 50.7 10.6 86 76-165 222-323 (336)
63 2ftp_A Hydroxymethylglutaryl-C 95.4 0.084 2.9E-06 49.7 10.4 105 83-188 87-209 (302)
64 3hgj_A Chromate reductase; TIM 95.3 0.41 1.4E-05 45.9 15.2 127 76-208 142-308 (349)
65 3zwt_A Dihydroorotate dehydrog 95.2 0.081 2.8E-06 51.4 9.9 84 76-163 231-330 (367)
66 1o66_A 3-methyl-2-oxobutanoate 95.2 0.073 2.5E-06 49.7 9.1 126 66-213 83-230 (275)
67 2nzl_A Hydroxyacid oxidase 1; 95.0 0.04 1.4E-06 54.0 7.2 94 84-182 265-361 (392)
68 2nli_A Lactate oxidase; flavoe 95.0 0.037 1.3E-06 53.8 6.9 94 83-181 241-337 (368)
69 1ydn_A Hydroxymethylglutaryl-C 94.6 0.21 7.2E-06 46.6 10.8 106 82-188 82-205 (295)
70 1ub3_A Aldolase protein; schif 94.6 0.71 2.4E-05 41.5 13.9 126 62-188 55-182 (220)
71 3sgz_A Hydroxyacid oxidase 2; 94.6 0.05 1.7E-06 52.6 6.5 94 84-182 230-326 (352)
72 4e38_A Keto-hydroxyglutarate-a 94.6 0.78 2.7E-05 41.6 14.1 188 59-287 33-228 (232)
73 1jub_A Dihydroorotate dehydrog 94.5 0.18 6.2E-06 47.2 10.1 84 76-161 103-193 (311)
74 2e6f_A Dihydroorotate dehydrog 94.4 0.097 3.3E-06 49.2 8.0 87 76-167 171-281 (314)
75 1p0k_A Isopentenyl-diphosphate 94.4 0.081 2.8E-06 50.7 7.5 91 83-181 193-304 (349)
76 1vyr_A Pentaerythritol tetrani 94.3 0.57 2E-05 45.2 13.4 127 79-215 161-322 (364)
77 2r14_A Morphinone reductase; H 94.2 0.37 1.3E-05 46.8 11.7 128 79-215 166-327 (377)
78 3irs_A Uncharacterized protein 94.2 0.49 1.7E-05 43.8 12.1 131 81-216 49-188 (291)
79 1z41_A YQJM, probable NADH-dep 94.0 0.57 1.9E-05 44.6 12.6 129 79-215 144-306 (338)
80 2bdq_A Copper homeostasis prot 94.0 0.18 6.2E-06 45.5 8.3 93 59-160 87-207 (224)
81 1m3u_A 3-methyl-2-oxobutanoate 93.9 0.18 6.1E-06 46.8 8.3 124 66-212 83-229 (264)
82 1ujp_A Tryptophan synthase alp 93.8 1.1 3.9E-05 41.4 13.7 179 60-259 15-231 (271)
83 2cw6_A Hydroxymethylglutaryl-C 93.7 0.43 1.5E-05 44.7 10.8 100 83-183 84-198 (298)
84 1oy0_A Ketopantoate hydroxymet 93.7 0.27 9.3E-06 45.9 9.3 127 64-212 98-247 (281)
85 1wa3_A 2-keto-3-deoxy-6-phosph 93.6 2 6.8E-05 37.2 14.6 156 76-261 19-182 (205)
86 1m3u_A 3-methyl-2-oxobutanoate 93.6 0.87 3E-05 42.1 12.5 121 61-206 16-147 (264)
87 1wv2_A Thiazole moeity, thiazo 93.6 0.21 7.3E-06 46.1 8.2 90 83-181 147-237 (265)
88 1nvm_A HOA, 4-hydroxy-2-oxoval 93.4 0.31 1.1E-05 46.7 9.5 101 74-178 144-248 (345)
89 3nav_A Tryptophan synthase alp 93.4 4.8 0.00016 37.2 17.8 175 72-259 27-239 (271)
90 1ka9_F Imidazole glycerol phos 93.4 0.23 8E-06 44.7 8.2 88 82-177 155-243 (252)
91 1ps9_A 2,4-dienoyl-COA reducta 93.3 1.3 4.4E-05 45.9 14.6 130 80-215 142-309 (671)
92 3l5l_A Xenobiotic reductase A; 93.2 0.39 1.3E-05 46.3 10.0 127 75-208 147-315 (363)
93 3vav_A 3-methyl-2-oxobutanoate 93.2 1.2 4.1E-05 41.4 12.8 120 51-188 15-148 (275)
94 1gox_A (S)-2-hydroxy-acid oxid 93.2 0.13 4.6E-06 49.8 6.6 94 83-181 237-333 (370)
95 3iwp_A Copper homeostasis prot 93.1 0.26 8.8E-06 46.2 8.1 91 59-160 122-238 (287)
96 1to3_A Putative aldolase YIHT; 93.1 0.71 2.4E-05 43.5 11.3 167 78-258 47-255 (304)
97 2e6f_A Dihydroorotate dehydrog 93.0 0.29 1E-05 45.9 8.4 84 76-161 103-196 (314)
98 3ewb_X 2-isopropylmalate synth 92.9 0.7 2.4E-05 43.2 10.9 103 80-183 81-192 (293)
99 1jcn_A Inosine monophosphate d 92.9 1 3.5E-05 45.3 12.9 95 81-187 256-363 (514)
100 3khj_A Inosine-5-monophosphate 92.9 3.8 0.00013 39.4 16.3 169 64-262 47-241 (361)
101 3sr7_A Isopentenyl-diphosphate 92.8 0.2 7E-06 48.5 7.3 91 84-182 222-332 (365)
102 1to3_A Putative aldolase YIHT; 92.7 0.57 1.9E-05 44.2 10.1 100 83-184 112-223 (304)
103 2w6r_A Imidazole glycerol phos 92.7 0.32 1.1E-05 44.2 8.2 87 82-176 159-246 (266)
104 3gr7_A NADPH dehydrogenase; fl 92.7 0.78 2.7E-05 43.8 11.2 124 76-208 134-297 (340)
105 2qjg_A Putative aldolase MJ040 92.7 0.66 2.3E-05 42.3 10.3 94 76-181 163-258 (273)
106 3q58_A N-acetylmannosamine-6-p 92.7 4.2 0.00014 36.4 15.5 181 60-268 18-221 (229)
107 2gou_A Oxidoreductase, FMN-bin 92.7 0.86 2.9E-05 44.0 11.5 118 80-209 162-313 (365)
108 3vkj_A Isopentenyl-diphosphate 92.7 0.16 5.4E-06 49.3 6.2 93 83-182 202-320 (368)
109 3tha_A Tryptophan synthase alp 92.6 3.8 0.00013 37.5 15.1 177 69-259 18-229 (252)
110 1vcf_A Isopentenyl-diphosphate 92.5 0.5 1.7E-05 44.9 9.5 90 85-182 198-309 (332)
111 2cw6_A Hydroxymethylglutaryl-C 92.5 1.2 4.2E-05 41.5 12.1 116 58-178 131-260 (298)
112 1thf_D HISF protein; thermophI 92.5 0.35 1.2E-05 43.5 8.1 88 82-177 154-242 (253)
113 1y0e_A Putative N-acetylmannos 92.5 1.6 5.5E-05 38.3 12.3 110 82-208 78-195 (223)
114 3apt_A Methylenetetrahydrofola 92.5 4.7 0.00016 37.9 16.2 110 76-191 83-210 (310)
115 1ydo_A HMG-COA lyase; TIM-barr 92.4 0.73 2.5E-05 43.4 10.3 99 84-183 86-199 (307)
116 3gka_A N-ethylmaleimide reduct 92.3 3.1 0.00011 40.0 14.9 120 80-215 162-315 (361)
117 1vrd_A Inosine-5'-monophosphat 92.3 1.2 4E-05 44.6 12.3 71 79-160 236-306 (494)
118 1kbi_A Cytochrome B2, L-LCR; f 92.2 0.22 7.7E-06 50.4 6.9 94 83-181 355-456 (511)
119 3vzx_A Heptaprenylglyceryl pho 92.2 4 0.00014 36.8 14.5 178 68-271 11-223 (228)
120 2hbv_A 2-amino-3-carboxymucona 92.1 1.4 4.7E-05 41.3 12.0 109 82-190 61-179 (334)
121 1vcv_A Probable deoxyribose-ph 92.1 2.4 8.2E-05 38.2 12.9 103 60-164 49-152 (226)
122 3rmj_A 2-isopropylmalate synth 91.8 1.4 4.8E-05 42.7 11.8 35 147-182 135-169 (370)
123 3glc_A Aldolase LSRF; TIM barr 91.8 1.6 5.4E-05 41.0 11.7 108 60-181 170-278 (295)
124 1mzh_A Deoxyribose-phosphate a 91.8 2.5 8.5E-05 37.7 12.7 83 78-161 69-153 (225)
125 3b0p_A TRNA-dihydrouridine syn 91.6 0.87 3E-05 43.6 10.1 85 76-167 141-232 (350)
126 1h5y_A HISF; histidine biosynt 91.4 0.61 2.1E-05 41.4 8.3 87 82-178 157-246 (253)
127 1qwg_A PSL synthase;, (2R)-pho 91.2 1.5 5.1E-05 40.2 10.6 76 80-161 86-169 (251)
128 3r2g_A Inosine 5'-monophosphat 91.2 0.86 2.9E-05 44.1 9.5 70 79-160 99-169 (361)
129 3ngj_A Deoxyribose-phosphate a 91.2 5 0.00017 36.4 14.1 125 61-186 78-204 (239)
130 1w8s_A FBP aldolase, fructose- 91.1 1.1 3.8E-05 41.2 9.8 94 77-181 157-252 (263)
131 2hsa_B 12-oxophytodienoate red 91.0 3.4 0.00012 40.3 13.7 128 79-215 171-347 (402)
132 2v82_A 2-dehydro-3-deoxy-6-pho 91.0 7.3 0.00025 33.8 15.4 158 76-262 16-181 (212)
133 2ftp_A Hydroxymethylglutaryl-C 90.9 0.61 2.1E-05 43.7 8.1 101 73-178 153-263 (302)
134 1ydo_A HMG-COA lyase; TIM-barr 90.9 0.43 1.5E-05 45.1 6.9 115 59-178 133-261 (307)
135 4ab4_A Xenobiotic reductase B; 90.8 5.7 0.0002 38.2 15.0 125 75-215 142-307 (362)
136 3ble_A Citramalate synthase fr 90.7 1 3.6E-05 42.9 9.6 97 85-182 102-210 (337)
137 3lab_A Putative KDPG (2-keto-3 90.7 2.3 7.9E-05 38.1 11.2 182 59-281 12-207 (217)
138 4fo4_A Inosine 5'-monophosphat 90.7 0.63 2.2E-05 45.1 8.0 67 82-159 110-176 (366)
139 3kdn_A Rubisco, ribulose bisph 90.6 3.3 0.00011 41.0 13.2 110 67-178 159-273 (444)
140 3b0p_A TRNA-dihydrouridine syn 90.5 1.5 5E-05 42.0 10.5 84 77-162 68-166 (350)
141 1o66_A 3-methyl-2-oxobutanoate 90.5 1.6 5.3E-05 40.6 10.1 102 126-235 16-135 (275)
142 3p6l_A Sugar phosphate isomera 90.4 7.1 0.00024 34.6 14.5 129 80-217 23-164 (262)
143 2nli_A Lactate oxidase; flavoe 90.4 0.91 3.1E-05 43.9 9.0 73 77-161 144-258 (368)
144 1eye_A DHPS 1, dihydropteroate 90.3 1.5 5E-05 40.9 9.9 120 59-190 8-132 (280)
145 1geq_A Tryptophan synthase alp 90.1 9.7 0.00033 33.8 16.8 175 72-260 12-223 (248)
146 1f76_A Dihydroorotate dehydrog 90.0 2.1 7E-05 40.4 10.9 85 78-163 152-248 (336)
147 1ypf_A GMP reductase; GUAC, pu 89.9 0.78 2.7E-05 43.6 7.9 74 83-165 161-244 (336)
148 1icp_A OPR1, 12-oxophytodienoa 89.9 2.1 7.2E-05 41.4 11.1 129 79-215 167-329 (376)
149 3khj_A Inosine-5-monophosphate 89.9 0.92 3.1E-05 43.8 8.5 67 82-160 107-173 (361)
150 1aj0_A DHPS, dihydropteroate s 89.9 1.6 5.4E-05 40.7 9.8 120 58-190 16-141 (282)
151 1xm3_A Thiazole biosynthesis p 89.8 4.9 0.00017 36.7 13.0 166 76-259 23-209 (264)
152 3aty_A Tcoye, prostaglandin F2 89.8 2.3 7.9E-05 41.2 11.2 126 78-215 173-335 (379)
153 2q02_A Putative cytoplasmic pr 89.6 6.2 0.00021 35.0 13.4 134 81-217 21-170 (272)
154 3ngj_A Deoxyribose-phosphate a 89.6 5.4 0.00018 36.2 12.8 162 75-256 39-230 (239)
155 3igs_A N-acetylmannosamine-6-p 89.5 11 0.00038 33.6 17.1 182 60-268 18-221 (232)
156 1eep_A Inosine 5'-monophosphat 89.4 1.4 4.7E-05 43.0 9.3 66 82-159 155-221 (404)
157 3ewb_X 2-isopropylmalate synth 89.3 1.7 5.7E-05 40.7 9.5 102 73-178 144-251 (293)
158 2f6k_A Metal-dependent hydrola 89.2 3.3 0.00011 37.7 11.4 109 81-190 37-156 (307)
159 3vnd_A TSA, tryptophan synthas 89.1 2.7 9.3E-05 38.7 10.7 36 80-122 111-146 (267)
160 1wdd_A Ribulose bisphosphate c 89.0 5.1 0.00018 40.0 13.2 95 65-160 169-268 (477)
161 1u83_A Phosphosulfolactate syn 88.9 2 7E-05 39.8 9.5 75 80-161 111-193 (276)
162 3nwr_A A rubisco-like protein; 88.9 4.7 0.00016 39.8 12.7 95 62-160 163-261 (432)
163 4ay7_A Methylcobalamin\: coenz 88.9 4.4 0.00015 38.3 12.4 124 112-240 132-294 (348)
164 3r2g_A Inosine 5'-monophosphat 88.9 15 0.00052 35.2 16.2 169 63-264 43-235 (361)
165 4ef8_A Dihydroorotate dehydrog 88.8 1.1 3.7E-05 43.2 8.0 86 76-166 204-312 (354)
166 4f0h_A Ribulose bisphosphate c 88.8 4.1 0.00014 40.9 12.4 95 66-160 179-277 (493)
167 3qfw_A Ribulose-1,5-bisphospha 88.8 3.9 0.00013 39.7 11.9 94 62-160 133-230 (378)
168 3oa3_A Aldolase; structural ge 88.7 3.5 0.00012 38.5 11.1 98 62-160 110-208 (288)
169 1bwv_A Rubisco, protein (ribul 88.7 5.2 0.00018 40.1 13.1 95 65-160 178-277 (493)
170 3bld_A Queuine tRNA-ribosyltra 88.7 1.5 5.1E-05 42.7 8.9 81 73-163 203-285 (386)
171 2y5s_A DHPS, dihydropteroate s 88.6 2.1 7.3E-05 40.1 9.6 119 59-190 25-148 (294)
172 2dvt_A Thermophilic reversible 88.3 3.5 0.00012 37.9 11.0 107 82-189 41-165 (327)
173 2htm_A Thiazole biosynthesis p 88.3 1.3 4.5E-05 40.9 7.8 90 83-180 136-227 (268)
174 1h5y_A HISF; histidine biosynt 88.3 2.3 7.9E-05 37.5 9.5 77 80-164 34-110 (253)
175 2ekc_A AQ_1548, tryptophan syn 88.2 7.3 0.00025 35.4 13.0 110 80-209 110-227 (262)
176 1mzh_A Deoxyribose-phosphate a 88.2 3.3 0.00011 36.9 10.4 75 76-160 129-204 (225)
177 3cwo_X Beta/alpha-barrel prote 88.1 1.7 5.8E-05 37.6 8.3 88 80-177 131-221 (237)
178 1ep3_A Dihydroorotate dehydrog 88.1 7.7 0.00026 35.7 13.2 99 106-208 77-187 (311)
179 3nvt_A 3-deoxy-D-arabino-heptu 87.8 3.7 0.00013 40.0 11.1 84 127-221 142-235 (385)
180 2rdx_A Mandelate racemase/muco 87.7 12 0.0004 35.8 14.7 122 76-219 144-270 (379)
181 1xm3_A Thiazole biosynthesis p 87.7 1.3 4.4E-05 40.7 7.5 86 85-179 140-227 (264)
182 1qo2_A Molecule: N-((5-phospho 87.7 1 3.5E-05 40.3 6.7 89 82-176 147-240 (241)
183 4fxs_A Inosine-5'-monophosphat 87.7 3.6 0.00012 41.3 11.3 68 82-160 233-300 (496)
184 3ndo_A Deoxyribose-phosphate a 87.6 8.3 0.00028 34.8 12.6 114 61-175 63-183 (231)
185 3w01_A Heptaprenylglyceryl pho 87.6 1.1 3.9E-05 40.6 6.9 73 67-160 15-87 (235)
186 2d69_A Ribulose bisphosphate c 87.6 5.4 0.00019 39.3 12.2 112 65-178 154-270 (430)
187 2vp8_A Dihydropteroate synthas 87.5 0.77 2.6E-05 43.6 5.9 119 58-190 43-168 (318)
188 3r12_A Deoxyribose-phosphate a 87.5 13 0.00046 34.0 14.1 163 75-257 55-247 (260)
189 1ydn_A Hydroxymethylglutaryl-C 87.4 1 3.5E-05 41.8 6.7 114 59-177 131-258 (295)
190 2wm1_A 2-amino-3-carboxymucona 87.4 3.3 0.00011 38.5 10.3 108 82-190 57-176 (336)
191 3usb_A Inosine-5'-monophosphat 87.4 3.9 0.00013 41.1 11.5 67 82-159 258-324 (511)
192 2gjl_A Hypothetical protein PA 87.3 3.1 0.0001 39.1 10.1 101 81-207 85-191 (328)
193 1tqj_A Ribulose-phosphate 3-ep 87.2 2.5 8.6E-05 37.8 9.0 170 76-261 14-205 (230)
194 4exq_A UPD, URO-D, uroporphyri 87.1 4.1 0.00014 39.1 11.0 69 84-159 202-279 (368)
195 1ep3_A Dihydroorotate dehydrog 87.1 1.1 3.7E-05 41.6 6.7 83 77-162 109-198 (311)
196 3kru_A NADH:flavin oxidoreduct 87.1 4.9 0.00017 38.3 11.4 125 76-208 133-297 (343)
197 3eeg_A 2-isopropylmalate synth 87.1 1.7 6E-05 41.2 8.2 114 59-178 133-252 (325)
198 1oy0_A Ketopantoate hydroxymet 86.9 1.6 5.4E-05 40.7 7.6 89 126-221 33-136 (281)
199 2oem_A 2,3-diketo-5-methylthio 86.9 6.2 0.00021 38.7 12.2 92 67-160 143-239 (413)
200 2x7v_A Probable endonuclease 4 86.8 13 0.00044 33.1 13.7 132 81-213 14-174 (287)
201 2ash_A Queuine tRNA-ribosyltra 86.7 2.5 8.7E-05 41.0 9.2 81 73-163 196-278 (381)
202 4fo4_A Inosine 5'-monophosphat 86.7 8.1 0.00028 37.2 12.8 159 83-263 61-246 (366)
203 3f4w_A Putative hexulose 6 pho 86.7 0.79 2.7E-05 40.0 5.2 67 83-160 68-134 (211)
204 2zvi_A 2,3-diketo-5-methylthio 86.6 6.7 0.00023 38.6 12.2 93 66-160 156-253 (425)
205 3vni_A Xylose isomerase domain 86.4 18 0.00061 32.4 15.0 133 80-217 18-184 (294)
206 3ij6_A Uncharacterized metal-d 86.4 1.9 6.5E-05 40.3 8.0 107 83-189 45-162 (312)
207 1qtw_A Endonuclease IV; DNA re 86.3 17 0.0006 32.2 14.9 136 81-217 14-179 (285)
208 4avf_A Inosine-5'-monophosphat 86.2 2.3 8E-05 42.6 9.0 68 81-159 230-297 (490)
209 3ih1_A Methylisocitrate lyase; 86.2 12 0.00041 35.1 13.4 117 60-188 27-163 (305)
210 3fk4_A Rubisco-like protein; s 86.2 6.8 0.00023 38.4 12.0 95 62-160 142-240 (414)
211 1twd_A Copper homeostasis prot 86.1 0.75 2.6E-05 42.3 4.8 88 59-159 84-197 (256)
212 1nvm_A HOA, 4-hydroxy-2-oxoval 86.0 4.6 0.00016 38.4 10.6 93 82-183 96-191 (345)
213 3l5a_A NADH/flavin oxidoreduct 86.0 16 0.00056 35.7 14.8 134 75-214 159-344 (419)
214 3iv3_A Tagatose 1,6-diphosphat 85.9 3.5 0.00012 39.3 9.6 101 77-192 51-172 (332)
215 1thf_D HISF protein; thermophI 85.9 3.4 0.00011 36.9 9.1 76 81-164 32-107 (253)
216 3tsm_A IGPS, indole-3-glycerol 85.9 21 0.00073 32.8 17.9 158 82-261 82-253 (272)
217 2qyg_A Ribulose bisphosphate c 85.9 5.1 0.00017 39.8 11.0 92 67-160 188-284 (452)
218 1ykw_A Rubisco-like protein; b 85.8 5.8 0.0002 39.2 11.3 93 66-160 167-264 (435)
219 3rmj_A 2-isopropylmalate synth 85.8 2.7 9.3E-05 40.6 8.9 98 59-162 139-238 (370)
220 3vav_A 3-methyl-2-oxobutanoate 85.7 5.2 0.00018 37.1 10.4 101 126-235 28-146 (275)
221 2a5h_A L-lysine 2,3-aminomutas 85.7 25 0.00086 34.1 16.0 118 74-195 143-297 (416)
222 2z6i_A Trans-2-enoyl-ACP reduc 85.5 1.6 5.4E-05 41.3 7.0 102 81-208 77-182 (332)
223 4avf_A Inosine-5'-monophosphat 85.4 4.7 0.00016 40.3 10.8 76 84-165 283-366 (490)
224 2nx9_A Oxaloacetate decarboxyl 85.3 20 0.00067 35.6 15.1 104 78-188 99-207 (464)
225 2f6u_A GGGPS, (S)-3-O-geranylg 85.2 4.9 0.00017 36.3 9.8 69 70-160 15-84 (234)
226 1z41_A YQJM, probable NADH-dep 85.2 4.9 0.00017 38.0 10.4 88 74-168 224-315 (338)
227 3eeg_A 2-isopropylmalate synth 85.1 1.8 6.3E-05 41.0 7.2 60 142-204 124-183 (325)
228 4fxs_A Inosine-5'-monophosphat 85.1 4.2 0.00014 40.8 10.2 76 84-165 285-368 (496)
229 3m47_A Orotidine 5'-phosphate 85.0 2 6.9E-05 38.5 7.1 98 64-178 120-220 (228)
230 1jvn_A Glutamine, bifunctional 85.0 2.9 0.0001 42.5 9.1 87 83-176 456-543 (555)
231 2ovl_A Putative racemase; stru 84.9 15 0.00053 34.8 13.9 145 76-238 145-300 (371)
232 3fst_A 5,10-methylenetetrahydr 84.9 25 0.00086 32.8 17.5 124 76-208 94-241 (304)
233 3ivs_A Homocitrate synthase, m 84.9 4.4 0.00015 39.9 10.0 95 86-181 117-220 (423)
234 3lmz_A Putative sugar isomeras 84.8 20 0.00068 31.6 14.6 124 80-215 31-161 (257)
235 3tha_A Tryptophan synthase alp 84.8 4.5 0.00015 37.0 9.4 110 80-209 104-220 (252)
236 1n7k_A Deoxyribose-phosphate a 84.7 14 0.00046 33.4 12.5 98 62-164 72-172 (234)
237 1vhc_A Putative KHG/KDPG aldol 84.7 21 0.00072 31.7 14.9 188 59-289 16-213 (224)
238 1vhc_A Putative KHG/KDPG aldol 84.5 2.4 8.4E-05 37.9 7.4 104 83-216 80-184 (224)
239 1r30_A Biotin synthase; SAM ra 84.5 6.7 0.00023 37.3 11.0 101 75-182 98-206 (369)
240 1vhn_A Putative flavin oxidore 84.4 0.45 1.5E-05 44.9 2.6 78 83-168 144-221 (318)
241 3ble_A Citramalate synthase fr 84.3 3.9 0.00013 38.9 9.1 102 73-179 163-268 (337)
242 2nzl_A Hydroxyacid oxidase 1; 84.3 7 0.00024 38.0 11.1 24 76-99 157-180 (392)
243 2qgy_A Enolase from the enviro 84.1 29 0.00099 33.2 15.5 144 76-238 148-303 (391)
244 1zfj_A Inosine monophosphate d 84.0 2.4 8.2E-05 42.1 7.9 69 81-160 234-302 (491)
245 3fok_A Uncharacterized protein 83.9 28 0.00097 32.6 16.3 171 78-262 70-278 (307)
246 3bo9_A Putative nitroalkan dio 83.9 4.6 0.00016 38.0 9.5 101 81-207 91-195 (326)
247 2y88_A Phosphoribosyl isomeras 83.8 3.5 0.00012 36.6 8.2 88 81-180 33-121 (244)
248 1xg4_A Probable methylisocitra 83.7 3.3 0.00011 38.8 8.2 113 64-188 19-155 (295)
249 3ffs_A Inosine-5-monophosphate 83.7 2.5 8.7E-05 41.3 7.7 65 82-159 146-211 (400)
250 1tv5_A Dhodehase, dihydroorota 83.6 13 0.00043 36.8 12.8 87 78-165 196-336 (443)
251 1gte_A Dihydropyrimidine dehyd 83.6 3.6 0.00012 44.9 9.6 83 76-161 645-736 (1025)
252 1rqb_A Transcarboxylase 5S sub 83.6 4.1 0.00014 41.4 9.3 100 74-177 170-273 (539)
253 3oix_A Putative dihydroorotate 83.2 4.4 0.00015 38.7 9.0 88 76-167 204-312 (345)
254 1r3s_A URO-D, uroporphyrinogen 83.1 13 0.00045 35.3 12.5 70 83-159 201-282 (367)
255 1ka9_F Imidazole glycerol phos 83.1 3.8 0.00013 36.5 8.2 77 80-164 32-108 (252)
256 2eja_A URO-D, UPD, uroporphyri 83.0 21 0.00071 33.4 13.7 71 82-159 182-258 (338)
257 1p4c_A L(+)-mandelate dehydrog 82.9 0.96 3.3E-05 43.9 4.3 90 83-181 237-331 (380)
258 1h1y_A D-ribulose-5-phosphate 82.9 7 0.00024 34.6 9.8 168 76-261 16-205 (228)
259 2og9_A Mandelate racemase/muco 82.8 33 0.0011 32.8 15.3 145 76-238 161-316 (393)
260 3tva_A Xylose isomerase domain 82.8 19 0.00066 32.1 13.0 124 83-217 25-184 (290)
261 3iix_A Biotin synthetase, puta 82.5 24 0.00081 32.7 13.9 99 75-182 83-190 (348)
262 1ypf_A GMP reductase; GUAC, pu 82.5 4.9 0.00017 38.0 9.0 67 83-161 109-178 (336)
263 3r12_A Deoxyribose-phosphate a 82.5 25 0.00085 32.2 13.4 103 73-175 105-209 (260)
264 2yr1_A 3-dehydroquinate dehydr 82.3 23 0.00078 32.2 13.2 104 75-191 96-209 (257)
265 3ovp_A Ribulose-phosphate 3-ep 82.3 4.4 0.00015 36.3 8.2 171 75-260 13-200 (228)
266 3sgz_A Hydroxyacid oxidase 2; 82.2 7.9 0.00027 37.1 10.4 74 77-162 133-247 (352)
267 3nav_A Tryptophan synthase alp 82.1 5 0.00017 37.1 8.7 90 59-164 148-241 (271)
268 2w6r_A Imidazole glycerol phos 82.1 2.9 0.0001 37.7 7.0 89 81-177 32-121 (266)
269 2pgw_A Muconate cycloisomerase 81.9 36 0.0012 32.4 16.5 124 76-219 146-274 (384)
270 1i60_A IOLI protein; beta barr 81.9 18 0.00062 31.8 12.3 133 81-217 16-174 (278)
271 2agk_A 1-(5-phosphoribosyl)-5- 81.8 6.7 0.00023 35.8 9.4 91 83-178 162-258 (260)
272 2y88_A Phosphoribosyl isomeras 81.8 1.6 5.4E-05 38.9 5.1 86 81-176 151-242 (244)
273 3bo9_A Putative nitroalkan dio 81.8 1.7 5.8E-05 41.1 5.5 112 84-207 136-255 (326)
274 2a4a_A Deoxyribose-phosphate a 81.7 6 0.00021 36.8 9.0 118 61-179 89-212 (281)
275 3tb6_A Arabinose metabolism tr 81.7 3.5 0.00012 36.8 7.4 136 77-219 56-209 (298)
276 3bg3_A Pyruvate carboxylase, m 81.7 4.8 0.00017 42.3 9.3 100 74-178 256-359 (718)
277 3glc_A Aldolase LSRF; TIM barr 81.7 17 0.00057 33.9 12.2 74 84-160 130-209 (295)
278 2gl5_A Putative dehydratase pr 81.7 27 0.00094 33.5 14.3 153 73-238 146-327 (410)
279 2nx9_A Oxaloacetate decarboxyl 81.6 8.6 0.00029 38.3 10.7 100 73-178 152-255 (464)
280 3f4w_A Putative hexulose 6 pho 81.4 2.5 8.5E-05 36.7 6.1 89 82-179 117-206 (211)
281 2qiw_A PEP phosphonomutase; st 81.4 4 0.00014 37.3 7.7 99 111-220 6-115 (255)
282 3gd6_A Muconate cycloisomerase 81.4 28 0.00097 33.3 14.2 144 76-238 141-296 (391)
283 3sr7_A Isopentenyl-diphosphate 81.3 5.6 0.00019 38.4 9.0 131 64-208 88-228 (365)
284 2nql_A AGR_PAT_674P, isomerase 81.3 27 0.00094 33.3 14.1 125 77-220 164-293 (388)
285 1tx2_A DHPS, dihydropteroate s 81.2 3 0.0001 39.1 6.8 116 59-190 42-167 (297)
286 1vzw_A Phosphoribosyl isomeras 81.2 4.5 0.00015 35.9 7.9 88 81-180 34-122 (244)
287 1q7z_A 5-methyltetrahydrofolat 81.0 22 0.00074 36.2 13.8 139 62-214 101-270 (566)
288 2d73_A Alpha-glucosidase SUSB; 80.8 6.4 0.00022 41.4 9.7 128 75-217 367-527 (738)
289 1y0e_A Putative N-acetylmannos 80.7 27 0.00093 30.2 18.4 186 60-269 5-216 (223)
290 2z6i_A Trans-2-enoyl-ACP reduc 80.7 3.7 0.00013 38.7 7.4 72 84-167 122-198 (332)
291 1zlp_A PSR132, petal death pro 80.7 9.4 0.00032 36.1 10.2 114 64-188 41-177 (318)
292 3nur_A Amidohydrolase; TIM bar 80.6 9.9 0.00034 36.2 10.5 107 82-189 76-193 (357)
293 3igs_A N-acetylmannosamine-6-p 80.5 10 0.00035 33.9 10.0 103 83-209 92-202 (232)
294 2oz8_A MLL7089 protein; struct 80.5 39 0.0013 32.2 14.8 143 76-237 144-296 (389)
295 3hgj_A Chromate reductase; TIM 80.2 4.9 0.00017 38.3 8.1 89 73-168 233-326 (349)
296 1rd5_A Tryptophan synthase alp 80.0 8 0.00027 34.9 9.3 55 133-187 25-99 (262)
297 1mdl_A Mandelate racemase; iso 80.0 40 0.0014 31.6 15.9 126 76-219 143-273 (359)
298 3eoo_A Methylisocitrate lyase; 79.9 5.7 0.00019 37.2 8.3 113 64-188 24-159 (298)
299 2gjl_A Hypothetical protein PA 79.8 2.8 9.6E-05 39.4 6.3 77 85-167 131-208 (328)
300 3usb_A Inosine-5'-monophosphat 79.6 12 0.00041 37.6 11.2 76 85-166 311-394 (511)
301 1nu5_A Chloromuconate cycloiso 79.5 38 0.0013 31.9 14.3 144 77-238 142-297 (370)
302 2ze3_A DFA0005; organic waste 79.5 7.2 0.00025 36.0 8.8 113 64-188 18-149 (275)
303 1wbh_A KHG/KDPG aldolase; lyas 79.3 7 0.00024 34.6 8.4 104 83-216 79-183 (214)
304 1ub3_A Aldolase protein; schif 79.3 10 0.00034 33.9 9.4 160 77-257 17-207 (220)
305 1kbi_A Cytochrome B2, L-LCR; f 79.1 15 0.00052 36.9 11.7 73 77-161 258-372 (511)
306 4exq_A UPD, URO-D, uroporphyri 79.0 9.6 0.00033 36.5 9.9 93 139-239 196-303 (368)
307 1geq_A Tryptophan synthase alp 78.9 13 0.00043 33.0 10.1 18 82-99 98-115 (248)
308 3ozy_A Putative mandelate race 78.8 18 0.00063 34.7 11.9 145 75-238 149-305 (389)
309 3q58_A N-acetylmannosamine-6-p 78.8 4.2 0.00015 36.4 6.8 103 83-209 92-202 (229)
310 1rqb_A Transcarboxylase 5S sub 78.8 23 0.0008 35.8 13.0 104 78-188 116-226 (539)
311 3cyv_A URO-D, UPD, uroporphyri 78.4 31 0.0011 32.4 13.2 71 82-159 190-269 (354)
312 3bw2_A 2-nitropropane dioxygen 78.4 11 0.00037 35.9 10.1 104 81-209 111-229 (369)
313 1mxs_A KDPG aldolase; 2-keto-3 78.3 7.3 0.00025 34.8 8.3 101 83-215 89-192 (225)
314 1p1x_A Deoxyribose-phosphate a 78.3 11 0.00039 34.5 9.6 117 61-178 68-189 (260)
315 2ox4_A Putative mandelate race 78.3 42 0.0014 32.0 14.4 133 73-218 142-292 (403)
316 4hb7_A Dihydropteroate synthas 78.3 12 0.0004 34.6 9.7 122 59-193 9-136 (270)
317 3rot_A ABC sugar transporter, 78.1 21 0.00072 31.8 11.5 132 76-219 45-196 (297)
318 1qop_A Tryptophan synthase alp 78.0 16 0.00056 33.1 10.7 24 140-163 134-157 (268)
319 1vzw_A Phosphoribosyl isomeras 77.9 3.3 0.00011 36.9 5.8 86 81-176 148-239 (244)
320 3aam_A Endonuclease IV, endoiv 77.8 36 0.0012 29.9 15.2 125 80-212 15-164 (270)
321 1xi3_A Thiamine phosphate pyro 77.6 6.6 0.00023 33.8 7.6 65 80-159 27-92 (215)
322 1sfl_A 3-dehydroquinate dehydr 77.6 32 0.0011 30.7 12.4 119 62-191 62-195 (238)
323 4ay7_A Methylcobalamin\: coenz 77.6 14 0.00049 34.7 10.5 73 81-159 192-268 (348)
324 4e38_A Keto-hydroxyglutarate-a 77.5 12 0.00041 33.7 9.4 99 82-212 96-197 (232)
325 3iv3_A Tagatose 1,6-diphosphat 77.5 30 0.001 32.8 12.6 97 62-162 163-282 (332)
326 2qr6_A IMP dehydrogenase/GMP r 77.5 12 0.00042 35.9 10.2 76 85-165 225-311 (393)
327 1gte_A Dihydropyrimidine dehyd 77.4 2.5 8.4E-05 46.2 5.7 80 81-165 717-821 (1025)
328 1tqx_A D-ribulose-5-phosphate 77.4 16 0.00055 32.6 10.3 163 75-261 14-205 (227)
329 3tdn_A FLR symmetric alpha-bet 77.3 5.2 0.00018 35.7 7.0 76 81-164 37-112 (247)
330 3i65_A Dihydroorotate dehydrog 77.3 7.1 0.00024 38.3 8.4 87 78-165 198-308 (415)
331 3k30_A Histamine dehydrogenase 77.1 12 0.0004 38.8 10.5 84 76-160 146-263 (690)
332 3oix_A Putative dihydroorotate 77.0 28 0.00096 33.1 12.4 118 84-207 64-213 (345)
333 3dx5_A Uncharacterized protein 76.8 8.7 0.0003 34.4 8.5 135 81-218 17-173 (286)
334 2qde_A Mandelate racemase/muco 76.7 54 0.0018 31.3 15.2 124 76-218 144-272 (397)
335 2dqw_A Dihydropteroate synthas 76.7 3.3 0.00011 38.8 5.6 119 59-190 31-154 (294)
336 3gbv_A Putative LACI-family tr 76.6 34 0.0011 30.2 12.4 131 76-218 53-207 (304)
337 3jy6_A Transcriptional regulat 76.6 9.8 0.00034 33.6 8.7 129 77-219 48-189 (276)
338 2c6q_A GMP reductase 2; TIM ba 76.5 6.1 0.00021 37.7 7.6 66 84-160 122-189 (351)
339 3l5a_A NADH/flavin oxidoreduct 76.3 2.1 7.3E-05 42.0 4.4 88 75-168 260-354 (419)
340 2c6q_A GMP reductase 2; TIM ba 76.3 22 0.00077 33.7 11.5 74 83-165 173-257 (351)
341 3gr7_A NADPH dehydrogenase; fl 76.2 10 0.00035 35.9 9.1 89 74-168 224-315 (340)
342 3ivs_A Homocitrate synthase, m 76.2 8.6 0.00029 37.8 8.7 96 75-176 176-275 (423)
343 2h9a_B CO dehydrogenase/acetyl 76.1 8.7 0.0003 36.2 8.4 101 79-190 74-181 (310)
344 2ps2_A Putative mandelate race 76.0 48 0.0016 31.2 13.9 121 77-219 146-272 (371)
345 3gyb_A Transcriptional regulat 75.7 40 0.0014 29.4 12.9 80 77-160 102-183 (280)
346 3o07_A Pyridoxine biosynthesis 75.6 4.1 0.00014 37.9 5.8 109 88-219 131-276 (291)
347 3zwt_A Dihydroorotate dehydrog 75.6 11 0.00037 36.3 9.1 87 77-164 162-258 (367)
348 3k9c_A Transcriptional regulat 75.5 43 0.0015 29.6 15.1 104 77-190 110-222 (289)
349 3ksm_A ABC-type sugar transpor 75.5 17 0.00058 31.7 9.9 131 74-219 40-195 (276)
350 3qja_A IGPS, indole-3-glycerol 75.4 7.2 0.00024 35.9 7.5 84 87-178 177-260 (272)
351 1p0k_A Isopentenyl-diphosphate 75.4 26 0.00089 32.9 11.7 77 76-161 127-210 (349)
352 2o56_A Putative mandelate race 75.4 58 0.002 31.1 14.5 133 74-219 149-299 (407)
353 2hzg_A Mandelate racemase/muco 75.2 59 0.002 31.1 16.2 127 77-219 145-280 (401)
354 1jcn_A Inosine monophosphate d 75.2 19 0.00065 35.9 11.2 77 84-166 309-393 (514)
355 3l5l_A Xenobiotic reductase A; 75.1 3.8 0.00013 39.3 5.7 89 73-168 240-333 (363)
356 3b8i_A PA4872 oxaloacetate dec 74.9 6.6 0.00023 36.6 7.1 114 63-188 22-157 (287)
357 2bdq_A Copper homeostasis prot 74.8 8.4 0.00029 34.6 7.5 137 64-214 58-206 (224)
358 3qy7_A Tyrosine-protein phosph 74.7 4.6 0.00016 36.9 6.0 71 135-208 15-93 (262)
359 2gwg_A 4-oxalomesaconate hydra 74.7 12 0.00041 34.9 9.1 107 83-190 53-180 (350)
360 2qr6_A IMP dehydrogenase/GMP r 74.6 9.2 0.00031 36.8 8.4 67 83-160 169-239 (393)
361 1lt8_A Betaine-homocysteine me 74.3 21 0.00071 34.8 10.9 115 61-191 116-250 (406)
362 2yxb_A Coenzyme B12-dependent 74.2 16 0.00056 30.5 9.0 86 81-180 58-143 (161)
363 4dzi_A Putative TIM-barrel met 74.0 9.3 0.00032 37.4 8.3 109 81-189 103-231 (423)
364 3bw2_A 2-nitropropane dioxygen 73.9 16 0.00054 34.8 9.8 73 84-166 157-243 (369)
365 2qdd_A Mandelate racemase/muco 73.8 41 0.0014 31.9 12.8 121 77-219 145-270 (378)
366 3rr1_A GALD, putative D-galact 73.7 59 0.002 31.3 14.0 151 75-238 123-287 (405)
367 3ve9_A Orotidine-5'-phosphate 73.6 8.3 0.00028 34.2 7.2 96 66-181 103-202 (215)
368 1tzz_A Hypothetical protein L1 73.4 64 0.0022 30.7 14.2 126 76-219 164-298 (392)
369 3o1n_A 3-dehydroquinate dehydr 73.4 38 0.0013 31.1 11.9 31 127-157 159-193 (276)
370 3gdm_A Orotidine 5'-phosphate 73.4 6.2 0.00021 36.3 6.5 100 60-178 145-253 (267)
371 2p8b_A Mandelate racemase/muco 73.2 30 0.001 32.6 11.6 143 77-238 141-295 (369)
372 3rcy_A Mandelate racemase/muco 73.0 69 0.0024 31.2 14.4 150 76-238 145-312 (433)
373 1gox_A (S)-2-hydroxy-acid oxid 73.0 13 0.00044 35.6 9.0 78 77-161 134-254 (370)
374 2zds_A Putative DNA-binding pr 72.9 32 0.0011 31.4 11.5 134 81-221 17-213 (340)
375 3l49_A ABC sugar (ribose) tran 72.9 27 0.00094 30.7 10.7 59 128-191 36-95 (291)
376 1zco_A 2-dehydro-3-deoxyphosph 72.6 9.8 0.00033 34.8 7.6 34 128-161 24-58 (262)
377 1rvk_A Isomerase/lactonizing e 72.4 66 0.0023 30.4 18.4 131 75-218 147-284 (382)
378 2zad_A Muconate cycloisomerase 72.4 63 0.0021 30.1 15.2 144 77-238 139-292 (345)
379 2vef_A Dihydropteroate synthas 72.1 3.6 0.00012 38.8 4.7 119 59-190 12-137 (314)
380 3o74_A Fructose transport syst 72.1 14 0.00049 32.2 8.5 129 77-218 43-187 (272)
381 4ef8_A Dihydroorotate dehydrog 72.1 16 0.00056 34.8 9.4 84 77-162 137-230 (354)
382 1viz_A PCRB protein homolog; s 72.0 3 0.0001 37.9 3.9 69 70-160 15-84 (240)
383 1vrd_A Inosine-5'-monophosphat 72.0 21 0.00073 35.2 10.6 72 85-163 292-372 (494)
384 1eep_A Inosine 5'-monophosphat 71.9 17 0.00057 35.1 9.6 74 83-163 206-288 (404)
385 3fok_A Uncharacterized protein 71.8 17 0.00058 34.1 9.1 113 84-217 133-272 (307)
386 2hjp_A Phosphonopyruvate hydro 71.8 11 0.00038 35.1 7.9 113 64-188 17-153 (290)
387 3e61_A Putative transcriptiona 71.8 16 0.00053 32.2 8.7 123 77-218 49-184 (277)
388 2qq6_A Mandelate racemase/muco 71.8 72 0.0025 30.5 14.6 131 75-218 147-293 (410)
389 3kws_A Putative sugar isomeras 71.8 50 0.0017 29.3 12.3 129 80-217 39-198 (287)
390 3ajx_A 3-hexulose-6-phosphate 71.7 46 0.0016 28.3 14.5 165 76-260 10-189 (207)
391 1h1y_A D-ribulose-5-phosphate 71.7 13 0.00044 32.8 8.1 83 87-180 131-221 (228)
392 1vhn_A Putative flavin oxidore 71.5 12 0.00042 34.8 8.2 82 77-161 69-161 (318)
393 4inf_A Metal-dependent hydrola 71.4 25 0.00086 33.6 10.6 106 84-189 95-211 (373)
394 1zfj_A Inosine monophosphate d 71.2 12 0.00041 37.0 8.5 74 86-165 289-370 (491)
395 3ffs_A Inosine-5-monophosphate 71.1 14 0.00048 36.0 8.8 77 83-165 196-280 (400)
396 2inf_A URO-D, UPD, uroporphyri 70.9 14 0.00049 34.9 8.7 71 82-159 196-271 (359)
397 2qf7_A Pyruvate carboxylase pr 70.4 10 0.00036 42.0 8.5 99 74-178 704-806 (1165)
398 3noy_A 4-hydroxy-3-methylbut-2 70.2 22 0.00077 34.1 9.7 108 66-187 83-209 (366)
399 3inp_A D-ribulose-phosphate 3- 70.2 19 0.00065 32.6 8.9 169 75-261 36-227 (246)
400 4i6k_A Amidohydrolase family p 70.1 30 0.001 31.4 10.5 123 81-220 55-182 (294)
401 3l6u_A ABC-type sugar transpor 70.0 26 0.00089 30.9 9.9 59 128-191 39-98 (293)
402 3tr9_A Dihydropteroate synthas 69.9 12 0.00041 35.3 7.7 118 59-191 30-157 (314)
403 1f6y_A 5-methyltetrahydrofolat 69.7 49 0.0017 30.0 11.7 100 76-190 22-124 (262)
404 2fli_A Ribulose-phosphate 3-ep 69.7 18 0.00063 31.1 8.6 81 91-178 130-216 (220)
405 3e3m_A Transcriptional regulat 69.6 28 0.00096 32.0 10.4 154 76-243 110-290 (355)
406 2pp0_A L-talarate/galactarate 69.6 67 0.0023 30.7 13.3 145 76-238 174-329 (398)
407 3egc_A Putative ribose operon 69.2 36 0.0012 30.0 10.7 127 77-218 49-193 (291)
408 3jvd_A Transcriptional regulat 68.8 69 0.0024 29.1 13.2 103 77-190 158-268 (333)
409 2tps_A Protein (thiamin phosph 68.7 19 0.00064 31.2 8.4 57 86-161 88-144 (227)
410 3vkj_A Isopentenyl-diphosphate 68.7 13 0.00044 35.8 7.8 131 64-209 61-210 (368)
411 3ajx_A 3-hexulose-6-phosphate 68.7 6.6 0.00023 33.8 5.3 78 89-178 124-204 (207)
412 2bmb_A Folic acid synthesis pr 68.6 19 0.00064 36.6 9.3 122 59-190 227-364 (545)
413 5rub_A Rubisco (ribulose-1,5-b 68.6 34 0.0012 34.1 11.0 91 68-159 187-286 (490)
414 3aal_A Probable endonuclease 4 68.4 67 0.0023 28.8 13.9 125 80-207 19-169 (303)
415 1twd_A Copper homeostasis prot 68.4 11 0.00038 34.5 6.9 129 65-207 56-188 (256)
416 3ro6_B Putative chloromuconate 68.2 41 0.0014 31.7 11.3 124 76-218 139-268 (356)
417 2qul_A D-tagatose 3-epimerase; 68.2 63 0.0022 28.4 13.9 135 81-218 19-186 (290)
418 1vs1_A 3-deoxy-7-phosphoheptul 68.1 20 0.0007 33.0 8.8 84 127-221 38-131 (276)
419 2gdq_A YITF; mandelate racemas 68.1 47 0.0016 31.5 11.8 126 76-219 138-269 (382)
420 3qja_A IGPS, indole-3-glycerol 68.1 16 0.00055 33.5 8.1 27 130-156 139-165 (272)
421 2dqw_A Dihydropteroate synthas 67.9 59 0.002 30.1 12.0 81 78-160 176-270 (294)
422 3dz1_A Dihydrodipicolinate syn 67.9 15 0.0005 34.4 7.9 73 75-151 57-129 (313)
423 1ofd_A Ferredoxin-dependent gl 67.9 13 0.00044 42.2 8.5 89 86-181 1046-1179(1520)
424 4do7_A Amidohydrolase 2; enzym 67.6 9.8 0.00034 34.9 6.6 123 81-217 36-165 (303)
425 2v82_A 2-dehydro-3-deoxy-6-pho 67.5 25 0.00087 30.2 9.0 67 87-166 116-182 (212)
426 3eez_A Putative mandelate race 67.5 36 0.0012 32.5 10.8 142 75-238 143-295 (378)
427 4dbe_A Orotidine 5'-phosphate 67.4 11 0.00039 33.5 6.7 98 66-181 110-209 (222)
428 3ru6_A Orotidine 5'-phosphate 67.4 13 0.00044 34.9 7.3 85 82-180 161-250 (303)
429 1vcv_A Probable deoxyribose-ph 67.3 35 0.0012 30.5 9.9 77 75-155 124-211 (226)
430 3ixl_A Amdase, arylmalonate de 67.1 12 0.00041 33.5 6.9 100 74-189 41-149 (240)
431 1wv2_A Thiazole moeity, thiazo 67.1 77 0.0026 29.0 13.8 176 79-269 30-231 (265)
432 1ccw_A Protein (glutamate muta 67.1 12 0.00041 30.5 6.3 88 82-178 44-132 (137)
433 3gip_A N-acyl-D-glutamate deac 66.8 39 0.0013 32.9 11.2 75 78-155 166-243 (480)
434 1vr6_A Phospho-2-dehydro-3-deo 66.7 15 0.00052 35.1 7.8 59 127-186 106-174 (350)
435 1j93_A UROD, uroporphyrinogen 66.6 27 0.00091 32.8 9.6 71 82-159 196-273 (353)
436 3m9w_A D-xylose-binding peripl 66.5 35 0.0012 30.5 10.1 86 95-191 6-92 (313)
437 3ayv_A Putative uncharacterize 66.4 56 0.0019 28.4 11.2 126 80-217 11-162 (254)
438 1ujp_A Tryptophan synthase alp 66.3 20 0.00067 32.9 8.3 58 133-191 23-102 (271)
439 2hxt_A L-fuconate dehydratase; 66.3 30 0.001 33.7 10.2 125 76-219 197-327 (441)
440 3h5o_A Transcriptional regulat 66.1 14 0.00049 33.8 7.4 127 77-215 103-243 (339)
441 2yzr_A Pyridoxal biosynthesis 66.1 15 0.00051 34.9 7.5 84 115-218 230-317 (330)
442 2poz_A Putative dehydratase; o 66.0 57 0.002 31.0 12.0 151 75-238 135-308 (392)
443 1tv8_A MOAA, molybdenum cofact 65.8 25 0.00086 32.6 9.2 79 74-160 48-126 (340)
444 3h5t_A Transcriptional regulat 65.7 82 0.0028 28.9 13.3 107 77-190 173-305 (366)
445 3stp_A Galactonate dehydratase 65.5 41 0.0014 32.6 10.9 130 77-219 179-314 (412)
446 3m9w_A D-xylose-binding peripl 65.3 33 0.0011 30.7 9.7 76 76-161 42-130 (313)
447 3vk5_A MOEO5; TIM barrel, tran 65.2 25 0.00084 32.7 8.6 117 40-182 157-274 (286)
448 3rhg_A Putative phophotriester 65.1 17 0.00057 34.9 7.8 10 77-86 104-113 (365)
449 2ztj_A Homocitrate synthase; ( 65.1 42 0.0014 32.2 10.7 95 85-181 80-184 (382)
450 3iwp_A Copper homeostasis prot 65.0 14 0.00049 34.3 7.0 132 63-208 92-228 (287)
451 1olt_A Oxygen-independent copr 65.0 34 0.0012 33.4 10.3 113 78-194 86-218 (457)
452 3ru6_A Orotidine 5'-phosphate 65.0 32 0.0011 32.2 9.5 68 82-159 93-177 (303)
453 2yw3_A 4-hydroxy-2-oxoglutarat 65.0 54 0.0019 28.4 10.6 58 83-160 74-131 (207)
454 2vg3_A Undecaprenyl pyrophosph 64.9 19 0.00065 33.4 7.8 105 76-182 83-199 (284)
455 3ugs_B Undecaprenyl pyrophosph 64.9 32 0.0011 30.8 9.1 120 73-206 31-162 (225)
456 2ztj_A Homocitrate synthase; ( 64.9 25 0.00084 33.8 9.0 100 74-178 140-243 (382)
457 3oa3_A Aldolase; structural ge 64.9 43 0.0015 31.1 10.3 77 74-157 183-260 (288)
458 3mkc_A Racemase; metabolic pro 64.8 99 0.0034 29.5 14.0 123 80-219 160-290 (394)
459 3bg3_A Pyruvate carboxylase, m 64.5 89 0.003 32.7 13.7 96 81-183 199-303 (718)
460 4eiv_A Deoxyribose-phosphate a 64.5 25 0.00086 32.8 8.5 119 61-180 83-207 (297)
461 2czd_A Orotidine 5'-phosphate 64.2 17 0.00057 31.5 7.1 102 61-179 101-204 (208)
462 3e3m_A Transcriptional regulat 63.9 88 0.003 28.6 12.8 80 78-159 172-256 (355)
463 3mcm_A 2-amino-4-hydroxy-6-hyd 63.6 15 0.00051 36.3 7.2 118 59-191 193-324 (442)
464 2qw5_A Xylose isomerase-like T 63.6 88 0.003 28.5 13.7 127 83-213 35-212 (335)
465 3g85_A Transcriptional regulat 63.6 76 0.0026 27.7 12.9 103 77-189 111-224 (289)
466 3a24_A Alpha-galactosidase; gl 63.5 12 0.00041 38.7 6.8 102 75-182 305-413 (641)
467 3e74_A Allantoinase; (beta/alp 63.5 13 0.00045 36.4 7.0 46 88-136 157-209 (473)
468 3ksm_A ABC-type sugar transpor 63.4 24 0.00083 30.6 8.2 71 114-191 19-93 (276)
469 2h3h_A Sugar ABC transporter, 63.1 40 0.0014 30.2 9.8 96 76-181 41-150 (313)
470 2gou_A Oxidoreductase, FMN-bin 63.1 14 0.00047 35.4 6.8 95 74-185 245-341 (365)
471 3o63_A Probable thiamine-phosp 63.0 12 0.00042 33.7 6.1 77 73-159 37-118 (243)
472 3hbl_A Pyruvate carboxylase; T 62.9 20 0.00069 39.7 8.9 97 75-177 688-788 (1150)
473 3mqt_A Mandelate racemase/muco 62.9 58 0.002 31.2 11.3 123 80-219 155-285 (394)
474 2zbt_A Pyridoxal biosynthesis 62.7 30 0.001 31.6 8.9 65 82-158 31-105 (297)
475 3tdn_A FLR symmetric alpha-bet 62.7 1.6 5.4E-05 39.3 0.0 78 83-168 160-237 (247)
476 1yxy_A Putative N-acetylmannos 62.6 24 0.00082 30.9 7.9 66 82-157 91-157 (234)
477 3tfx_A Orotidine 5'-phosphate 62.6 41 0.0014 30.6 9.6 68 82-159 73-163 (259)
478 3hcw_A Maltose operon transcri 62.3 83 0.0028 27.8 13.1 80 77-160 115-199 (295)
479 3dbi_A Sugar-binding transcrip 62.3 55 0.0019 29.7 10.7 130 76-218 103-249 (338)
480 3m47_A Orotidine 5'-phosphate 62.1 29 0.00098 30.8 8.3 72 81-159 80-156 (228)
481 3toy_A Mandelate racemase/muco 62.0 71 0.0024 30.4 11.7 126 76-219 166-297 (383)
482 2czd_A Orotidine 5'-phosphate 62.0 15 0.00052 31.8 6.4 68 81-160 67-139 (208)
483 2qkf_A 3-deoxy-D-manno-octulos 61.9 8.7 0.0003 35.6 5.0 90 127-219 15-138 (280)
484 1yxy_A Putative N-acetylmannos 61.7 8.7 0.0003 33.8 4.8 83 85-178 146-230 (234)
485 3g1w_A Sugar ABC transporter; 61.6 70 0.0024 28.2 11.1 73 112-191 21-95 (305)
486 3tfx_A Orotidine 5'-phosphate 61.5 30 0.001 31.6 8.5 87 80-180 145-236 (259)
487 3bjs_A Mandelate racemase/muco 61.5 1.2E+02 0.0041 29.3 15.1 122 79-219 187-314 (428)
488 2ffi_A 2-pyrone-4,6-dicarboxyl 61.4 16 0.00055 32.7 6.7 119 81-216 42-165 (288)
489 3fa4_A 2,3-dimethylmalate lyas 61.3 18 0.00061 33.9 7.0 110 62-182 18-147 (302)
490 2ox1_A 3-dehydroquinate dehydr 61.2 60 0.0021 28.1 10.1 106 63-191 38-152 (196)
491 4h3d_A 3-dehydroquinate dehydr 61.0 95 0.0032 28.0 13.0 114 77-190 61-209 (258)
492 1rpx_A Protein (ribulose-phosp 61.0 11 0.00039 33.0 5.4 76 78-160 22-98 (230)
493 3q45_A Mandelate racemase/muco 60.7 62 0.0021 30.6 11.0 124 77-219 140-268 (368)
494 1s2w_A Phosphoenolpyruvate pho 60.4 27 0.00091 32.5 8.1 113 64-188 21-157 (295)
495 1ea0_A Glutamate synthase [NAD 60.3 39 0.0013 38.3 10.5 90 85-181 1010-1144(1479)
496 3r0u_A Enzyme of enolase super 60.2 1.2E+02 0.004 28.8 15.2 146 76-238 141-297 (379)
497 2x7x_A Sensor protein; transfe 60.1 83 0.0028 28.3 11.5 72 115-191 22-96 (325)
498 3tr2_A Orotidine 5'-phosphate 59.9 36 0.0012 30.5 8.7 23 82-104 76-98 (239)
499 3cjp_A Predicted amidohydrolas 59.9 38 0.0013 30.0 8.9 127 82-213 16-174 (272)
500 3hm7_A Allantoinase; metallo-d 59.7 87 0.003 29.8 12.0 108 78-189 76-189 (448)
No 1
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=100.00 E-value=3.3e-86 Score=647.05 Aligned_cols=344 Identities=80% Similarity=1.300 Sum_probs=299.1
Q ss_pred cccccCCCCCCC---CCCCcccccCCCCCCCccccccccCCcccccCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCC
Q 018253 16 PVSVSCTGKNRK---WRPPQAAIIPNYHLPMRSFEVKNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNG 92 (359)
Q Consensus 16 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~G 92 (359)
|...-++..|-+ -|+|+|++++++|+||+|.++||+++++||++.|+++|++|||++||+||+++++++++|++++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~alvTPF~~dg~ID~~al~~lv~~li~~G 93 (360)
T 4dpp_A 14 PLLGLDSTENLYFQGIDPFTAAVVPNFHLPMRSLEVKNRTNTDDIKALRVITAIKTPYLPDGRFDLEAYDDLVNIQIQNG 93 (360)
T ss_dssp ----------------------------------------CHHHHHTCCEEEECCCCBCTTSSBCHHHHHHHHHHHHHTT
T ss_pred cccccccccceeeeccchhhhhhccccccccCCHhHhhccChhhcccCCeEEEEeCcCCCCCCcCHHHHHHHHHHHHHcC
Confidence 455555555555 48999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHH
Q 018253 93 AEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGL 172 (359)
Q Consensus 93 v~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l 172 (359)
++||+++|||||+++||.+||+++++.+++.++||+|||+|+|+++|+++++++++|+++|||++|++||||++++++++
T Consensus 94 v~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl 173 (360)
T 4dpp_A 94 AEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSIEGL 173 (360)
T ss_dssp CCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHH
T ss_pred CCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEeccCchhhHhhhhCCceEEEecCCchhhhhhhhcCCc
Q 018253 173 ISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECVGNDRVEHYTGNGIVVWSGNDDQCHDARWNHGAT 252 (359)
Q Consensus 173 ~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK~ss~d~~l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~ 252 (359)
++||++|+++.||++||+|++||++++++++.+|+++|||+|||++++|.++.++.+++|.||+|.|++++...+.+|++
T Consensus 174 ~~hf~~IA~a~PiilYNiP~rTg~~ls~e~l~~La~~pnIvGIKdssgd~~i~~~~~~~f~v~sG~D~~~l~~~l~~Ga~ 253 (360)
T 4dpp_A 174 IAHFQSVLHMGPTIIYNVPGRTGQDIPPRAIFKLSQNPNLAGVKECVGNKRVEEYTENGVVVWSGNDDECHDSRWDYGAT 253 (360)
T ss_dssp HHHHHTTGGGSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECSCHHHHHHHHHTTCCEEECCGGGHHHHHHHSCCC
T ss_pred HHHHHHHHHhCCEEEEeCCcccCCCCCHHHHHHHhcCCCEEEEEeCCCcHHHHHhhCCCEEEEeCChHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999998777666788999999998887655789999
Q ss_pred eeecccccccHHHHHHHHHcCCcHHHHHHHHHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 018253 253 GVISVTSNLVPGMMRELMFGGKNPSLNTKLFPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVN 332 (359)
Q Consensus 253 G~is~~an~~P~l~~~l~~ag~a~~l~~~l~~l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~ 332 (359)
|+||+++|++|+.++++|++|+++++|+++.+++++++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++
T Consensus 254 G~Is~~aNv~P~~~~~l~~aG~a~~l~~~l~pl~~~l~~~~~p~~vK~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~ 333 (360)
T 4dpp_A 254 GVISVTSNLVPGLMRKLMFEGRNSSLNSKLLPLMAWLFHEPNPIGINTALAQLGVSRPVFRLPYVPLPLSKRLEFVKLVK 333 (360)
T ss_dssp EEEESGGGTCHHHHHHHHHSCCCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTSSCSEEETTCCCCCHHHHHHHHHHHH
T ss_pred EEEccchhhcHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred HcCcccccccccccccCCCcccccccC
Q 018253 333 QIGRENFVGEKDVQVLDDDDFILVDRY 359 (359)
Q Consensus 333 ~lgl~~~~~~~~~~~~~~~~~~~~~~~ 359 (359)
++|+..|.|.+++++||||||+|+|||
T Consensus 334 ~~gl~~~~~~~~~~~~~~~~~~~~~~~ 360 (360)
T 4dpp_A 334 EIGREHFVGEKDVQALDDDDFILIGRY 360 (360)
T ss_dssp HHCGGGSSSSSCCCCCCGGGCEEESCC
T ss_pred HcCCcccCCcccceeecccceEEeecC
Confidence 999999999999999999999999998
No 2
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=100.00 E-value=1e-69 Score=524.80 Aligned_cols=279 Identities=32% Similarity=0.498 Sum_probs=264.9
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 137 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~ 137 (359)
.++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|++
T Consensus 22 ~~~Gv~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~ 101 (315)
T 3si9_A 22 MLKGAVTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSN 101 (315)
T ss_dssp CCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCS
T ss_pred cCCceeEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCeEE
Q 018253 138 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAG 214 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~-~pnivG 214 (359)
||+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|++ +|||+|
T Consensus 102 st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvg 181 (315)
T 3si9_A 102 STSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIG 181 (315)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEEE
Confidence 999999999999999999999999999999999999999999997 79999999999999999999999997 999999
Q ss_pred EeccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHH
Q 018253 215 VKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFP 284 (359)
Q Consensus 215 iK~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~ 284 (359)
||++++|. + +.+..+++|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| |+++|+++.+
T Consensus 182 iKdssgd~~~~~~l~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~ 260 (315)
T 3si9_A 182 VKDATGKIERASEQREKCGKDFVQLSGDDCTALGF-NAHGGVGCISVSSNVAPKLCAQLHAACLCSDYKTALKLNDLLMP 260 (315)
T ss_dssp EEECSCCTHHHHHHHHHHCSSSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHcCCCeEEEecCHHHHHHH-HHcCCCEEEecHHHhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999983 3 4444578999999999988865 8999999999999999999999996 575 6789999999
Q ss_pred HHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 285 LIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 285 l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
+++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+.
T Consensus 261 l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~l~ 313 (315)
T 3si9_A 261 LNRAVFIEPSPAGIKYAAAKLGLCGTIVRSPIVPLSDTTKKIIDEALYHAGLL 313 (315)
T ss_dssp HHHHTTSSSTTHHHHHHHHHTTSSCCCCCTTSCCCCHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHhcCChHHHHHHHHHCCCCCCCcCCCCCCCCHHHHHHHHHHHHHCCCc
Confidence 99999888899999999999999889999999999999999999999999864
No 3
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=100.00 E-value=1.4e-69 Score=520.34 Aligned_cols=278 Identities=35% Similarity=0.549 Sum_probs=262.9
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 137 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~ 137 (359)
.++|++++++|||++||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.++||+|||+|+|++
T Consensus 7 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 86 (297)
T 3flu_A 7 MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGAN 86 (297)
T ss_dssp CCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred ccCeeEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEE
Q 018253 138 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGV 215 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGi 215 (359)
+|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+||
T Consensus 87 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgi 166 (297)
T 3flu_A 87 NTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGV 166 (297)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEE
Confidence 999999999999999999999999999999999999999999997 799999999999999999999999999999999
Q ss_pred eccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018253 216 KECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 285 (359)
Q Consensus 216 K~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l 285 (359)
|++++|. + +.+..+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 167 Kdssgd~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 245 (297)
T 3flu_A 167 KEASGNIGSNIELINRAPEGFVVLSGDDHTALPF-MLCGGHGVITVAANAAPKLFADMCRAALQGDIALARELNDRLIPI 245 (297)
T ss_dssp EECSCCHHHHHHHHHHSCTTCEEEECCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHhcCCCeEEEECcHHHHHHH-HhCCCCEEEechHhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 3 3444568999999999988865 8999999999999999999999996 475 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018253 286 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 336 (359)
Q Consensus 286 ~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl 336 (359)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++|+++|+
T Consensus 246 ~~~l~~~~~~~~~K~al~~~G~~~~~~R~Pl~~l~~~~~~~l~~~l~~~~~ 296 (297)
T 3flu_A 246 YDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTENGQAKVRAALKASGQ 296 (297)
T ss_dssp HTTTTSSSTTHHHHHHHHHTTSCCCCCCTTSCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 998888889999999999999976569999999999999999999999886
No 4
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=100.00 E-value=9.3e-70 Score=525.06 Aligned_cols=279 Identities=34% Similarity=0.577 Sum_probs=264.7
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 137 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~ 137 (359)
+++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.++||+|||+|+|++
T Consensus 23 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~ 102 (314)
T 3qze_A 23 MIAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGAN 102 (314)
T ss_dssp CCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred cCCeeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEE
Q 018253 138 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGV 215 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGi 215 (359)
+|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+||
T Consensus 103 st~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 182 (314)
T 3qze_A 103 STREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGI 182 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEE
Confidence 999999999999999999999999999999999999999999997 799999999999999999999999999999999
Q ss_pred eccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018253 216 KECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 285 (359)
Q Consensus 216 K~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l 285 (359)
|++++|. + +.+..+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 183 Kdssgd~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~Ga~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 261 (314)
T 3qze_A 183 KEATGDLQRAKEVIERVGKDFLVYSGDDATAVEL-MLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPL 261 (314)
T ss_dssp EECSCCHHHHHHHHHHSCTTSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHcCCCeEEEecChHHHHHH-HHCCCCEEEecHHhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 3 3444568899999999988765 8999999999999999999999986 575 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 286 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 286 ~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++|+++|+.
T Consensus 262 ~~~l~~~~~~~~~K~al~~~G~~~~~~R~Pl~~l~~~~~~~l~~~l~~~~l~ 313 (314)
T 3qze_A 262 HKALFIESNPIPVKWALHEMGLIPEGIRLPLTWLSPRCHEPLRQAMRQTGVL 313 (314)
T ss_dssp HHHTTSSSTTHHHHHHHHHTTSSCSBCCTTSCCCCGGGHHHHHHHHHHTTCC
T ss_pred HHHHHccCCHHHHHHHHHHCCCCCCCcCCCCCCCCHHHHHHHHHHHHhcCCc
Confidence 9988888899999999999999888899999999999999999999999874
No 5
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=100.00 E-value=1.6e-69 Score=520.65 Aligned_cols=278 Identities=32% Similarity=0.550 Sum_probs=262.5
Q ss_pred ccCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018253 57 IKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 136 (359)
Q Consensus 57 ~~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~ 136 (359)
++++|++++++|||++||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|+
T Consensus 11 ~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~ 90 (301)
T 1xky_A 11 IDFGTIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS 90 (301)
T ss_dssp CCCCSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred cCCCceEEeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEE
Q 018253 137 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAG 214 (359)
Q Consensus 137 ~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivG 214 (359)
++|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|
T Consensus 91 ~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 170 (301)
T 1xky_A 91 NNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEIENIVA 170 (301)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEE
Confidence 9999999999999999999999999999999999999999999997 79999999999999999999999999999999
Q ss_pred EeccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHH
Q 018253 215 VKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFP 284 (359)
Q Consensus 215 iK~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~ 284 (359)
||++++|. + +.+..+++|.+|+|.|+++++. +..|++|+||+++|++|++++++|+ +|| ++++|+++.+
T Consensus 171 iKdssgd~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~ 249 (301)
T 1xky_A 171 IKDAGGDVLTMTEIIEKTADDFAVYSGDDGLTLPA-MAVGAKGIVSVASHVIGNEMQEMIAAFQAGEFKKAQKLHQLLVR 249 (301)
T ss_dssp EEECSSCHHHHHHHHHHSCTTCEEEESSGGGHHHH-HHTTCCEEEESTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHhcCCCeEEEECcHHHHHHH-HHcCCCEEEcCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 99999983 3 3344467899999999988865 8999999999999999999999986 475 6789999999
Q ss_pred HHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 018253 285 LIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIG 335 (359)
Q Consensus 285 l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lg 335 (359)
+++.++..++++.+|++|+++|++.+.+|+|+.+++++++++|++++++++
T Consensus 250 l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~ 300 (301)
T 1xky_A 250 VTDSLFMAPSPTPVKTALQMVGLDVGSVRLPLLPLTEEERVTLQSVMQSIP 300 (301)
T ss_dssp HHHHTTSSSTTHHHHHHHHHTTCCCCCCCTTSCCCCHHHHHHHHHHHHTSC
T ss_pred HHHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHhcc
Confidence 999888888899999999999998899999999999999999999999875
No 6
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=100.00 E-value=1.4e-69 Score=518.78 Aligned_cols=277 Identities=36% Similarity=0.584 Sum_probs=262.4
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++|||++||+||+++++++++|++++|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 2 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 81 (291)
T 3tak_A 2 IQGSIVAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANS 81 (291)
T ss_dssp CCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred CceeEeeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK 216 (359)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK 161 (291)
T 3tak_A 82 TREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIK 161 (291)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHcCCCEEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999999999999
Q ss_pred ccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018253 217 ECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 286 (359)
Q Consensus 217 ~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l~ 286 (359)
++++|. + +.+..+++|.+|+|.|+++++. +..|++|+||+++|++|++++++|+ +|| ++++|+++.+++
T Consensus 162 ~ssgd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 240 (291)
T 3tak_A 162 DATGDVPRGKALIDALNGKMAVYSGDDETAWEL-MLLGADGNISVTANIAPKAMSEVCAVAIAKDEQQAKTLNNKIANLH 240 (291)
T ss_dssp ECSCCHHHHHHHHHHHTTSSEEEECCHHHHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHTTHHHH
T ss_pred eCCCCHHHHHHHHHHcCCCeEEEECcHHHHHHH-HHCCCCEEEechhhhcHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3 3444578999999999988865 8999999999999999999999986 575 678999999999
Q ss_pred HHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018253 287 EWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 336 (359)
Q Consensus 287 ~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl 336 (359)
+.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++|+++|+
T Consensus 241 ~~l~~~~~~~~~K~al~~~G~~~~~~R~Pl~~l~~~~~~~l~~~l~~~~~ 290 (291)
T 3tak_A 241 NILFCESNPIPVKWALHEMGLIDTGIRLPLTPLAEQYREPLRNALKDAGI 290 (291)
T ss_dssp HHTTSSSTTHHHHHHHHHTTSSCSCCCTTSCSCCGGGHHHHHHHHHHTTC
T ss_pred HHHhccCChHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 98888889999999999999976569999999999999999999999886
No 7
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=100.00 E-value=1.3e-69 Score=521.03 Aligned_cols=277 Identities=19% Similarity=0.227 Sum_probs=262.5
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 137 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~ 137 (359)
+++|++++++|||++||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|++
T Consensus 4 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 83 (300)
T 3eb2_A 4 DFHGVFPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAST 83 (300)
T ss_dssp CCCEEEEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEES
T ss_pred cCCeeEEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEE
Q 018253 138 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGV 215 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGi 215 (359)
||+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+||
T Consensus 84 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 163 (300)
T 3eb2_A 84 SVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYI 163 (300)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTSTTEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcCCCEEEE
Confidence 999999999999999999999999999999999999999999997 799999999999999999999999999999999
Q ss_pred eccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018253 216 KECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 285 (359)
Q Consensus 216 K~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l 285 (359)
|++++|. + +.+..+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 164 Kdssgd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 242 (300)
T 3eb2_A 164 KDASTNTGRLLSIINRCGDALQVFSASAHIPAAV-MLIGGVGWMAGPACIAPRQSVALYELCKAQRWDEALMLQRKLWRV 242 (300)
T ss_dssp EECSSBHHHHHHHHHHHGGGSEEEECTTSCHHHH-HHTTCCEEEEGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHTHH
T ss_pred EcCCCCHHHHHHHHHHcCCCeEEEeCcHHHHHHH-HhCCCCEEEeChhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 3 3444567899999999988765 8999999999999999999999986 575 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 018253 286 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIG 335 (359)
Q Consensus 286 ~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lg 335 (359)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++.
T Consensus 243 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~ 292 (300)
T 3eb2_A 243 NEAFAKFNLAACIKAGLALQGYDVGDPIPPQAALTAEERKAVEKVLAEIA 292 (300)
T ss_dssp HHHHTTSCHHHHHHHHHHHTTCCCCCCCTTSCCCCHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCHHHHHHHHHHCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHh
Confidence 99999888899999999999998899999999999999999999999874
No 8
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=4.1e-69 Score=518.53 Aligned_cols=283 Identities=25% Similarity=0.404 Sum_probs=263.9
Q ss_pred cccCCcccccCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCc
Q 018253 49 KNRTSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASV 128 (359)
Q Consensus 49 ~~~~~~~~~~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grv 128 (359)
-++++.++ ++|++++++|||++||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.+++|+
T Consensus 9 ~~~~~~~~--~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grv 86 (304)
T 3cpr_A 9 TAKTGVEH--FGTVGVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRA 86 (304)
T ss_dssp SCCTTHHH--HCSEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTS
T ss_pred hhhccCCC--CCceEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCC
Confidence 34555554 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 129 KVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 129 pViagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
|||+|+|++||+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++|+++++.+|
T Consensus 87 pviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 166 (304)
T 3cpr_A 87 KLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRL 166 (304)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred cEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999997 799999999999999999999999
Q ss_pred hcCCCeEEEeccCchh-hH---hhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cH
Q 018253 207 AQSPNLAGVKECVGND-RV---EHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NP 276 (359)
Q Consensus 207 a~~pnivGiK~ss~d~-~l---~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~ 276 (359)
+++|||+|||++++|. ++ .+.. +|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++
T Consensus 167 a~~pnIvgiKdssgd~~~~~~~~~~~--~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~ 243 (304)
T 3cpr_A 167 SELPTILAVXDAKGDLVAATSLIKET--GLAWYSGDDPLNLVW-LALGGSGFISVIGHAAPTALRELYTSFEEGDLVRAR 243 (304)
T ss_dssp TTSTTEEEEEECSCCHHHHHHHHHHH--CCEEEECSGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHH
T ss_pred HcCCCEEEEecCCCCHHHHHHHHHhc--CEEEEECcHHHHHHH-HHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHH
Confidence 9999999999999983 33 3333 899999999988875 8999999999999999999999986 475 67
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018253 277 SLNTKLFPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 336 (359)
Q Consensus 277 ~l~~~l~~l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl 336 (359)
++|+++.++++.++..+++..+|++|+++|+..+.+|+|+.+++++++++|+++++++|+
T Consensus 244 ~l~~~l~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 303 (304)
T 3cpr_A 244 EINAKLSPLVAAQGRLGGVSLAKAALRLQGINVGDPRLPIMAPNEQELEALREDMKKAGV 303 (304)
T ss_dssp HHHHHTHHHHHHHHHHCHHHHHHHHHHHTTCCCCCCCTTSCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 899999999998887778899999999999988999999999999999999999999875
No 9
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=100.00 E-value=2.8e-69 Score=520.35 Aligned_cols=282 Identities=20% Similarity=0.330 Sum_probs=262.4
Q ss_pred cccccCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe
Q 018253 54 AEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN 133 (359)
Q Consensus 54 ~~~~~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag 133 (359)
++.++++|+|++++|||++||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.+++|+|||+|
T Consensus 10 ~~~~~~~Gi~~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG 89 (307)
T 3s5o_A 10 GKKVDIAGIYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAG 89 (307)
T ss_dssp --CCCCCEEECBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEE
T ss_pred CCCCCCCceEEeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEe
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC--CCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcC
Q 018253 134 TGSNSTREAIHATEQGFAVGMHAALHINPYYGK--TSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQS 209 (359)
Q Consensus 134 vg~~st~~ai~la~~a~~~Gadav~v~pP~y~~--~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~ 209 (359)
+|+++|+++++++++|+++|||++|++||||++ ++++++++||++|+++ +||++||+|++||++|+++++.+|+++
T Consensus 90 vg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 169 (307)
T 3s5o_A 90 SGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQH 169 (307)
T ss_dssp CCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTS
T ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcC
Confidence 999999999999999999999999999999986 7999999999999997 799999999999999999999999999
Q ss_pred CCeEEEeccCchh-hH---hhhh-CCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHH
Q 018253 210 PNLAGVKECVGND-RV---EHYT-GNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSL 278 (359)
Q Consensus 210 pnivGiK~ss~d~-~l---~~~~-~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l 278 (359)
|||+|||++++|. ++ .+.. +++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++
T Consensus 170 pnIvgiKdssgd~~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l 248 (307)
T 3s5o_A 170 PNIVGMXDSGGDVTRIGLIVHKTRKQDFQVLAGSAGFLMAS-YALGAVGGVCALANVLGAQVCQLERLCCTGQWEDAQKL 248 (307)
T ss_dssp TTEEEEEECSCCHHHHHHHHHHTTTSSCEEEESSGGGHHHH-HHHTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCEEEEEcCCCCHHHHHHHHHhccCCCeEEEeCcHHHHHHH-HHcCCCEEEechhhhhHHHHHHHHHHHHCCCHHHHHHH
Confidence 9999999999983 33 3333 47899999999988865 8999999999999999999999986 575 6789
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018253 279 NTKLFPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 336 (359)
Q Consensus 279 ~~~l~~l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl 336 (359)
|+++.++...++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++|+++|+
T Consensus 249 ~~~l~~~~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~g~ 306 (307)
T 3s5o_A 249 QHRLIEPNAAVTRRFGIPGLKKIMDWFGYYGGPCRAPLQELSPAEEEALRMDFTSNGW 306 (307)
T ss_dssp HHHHHHHHHHTTTTTHHHHHHHHHHHHTSCCCCCCTTSCCCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999888777777888999999999998999999999999999999999999886
No 10
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.8e-69 Score=521.87 Aligned_cols=278 Identities=23% Similarity=0.346 Sum_probs=263.1
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 137 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~ 137 (359)
+++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|++
T Consensus 24 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~ 103 (315)
T 3na8_A 24 SIHGIIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDL 103 (315)
T ss_dssp CCCEEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCS
T ss_pred ccCceEEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH-hcCCCeEE
Q 018253 138 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM-AQSPNLAG 214 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~L-a~~pnivG 214 (359)
+|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+| +++|||+|
T Consensus 104 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvg 183 (315)
T 3na8_A 104 TTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTM 183 (315)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEE
Confidence 999999999999999999999999999999999999999999997 799999999999999999999999 79999999
Q ss_pred EeccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHH
Q 018253 215 VKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFP 284 (359)
Q Consensus 215 iK~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~ 284 (359)
||++++|. + +.+..+++|.||+|.|+++++. +..|++|+||+++|++|++++++|+ +|| |+++|+++.+
T Consensus 184 iKdssgd~~~~~~~~~~~~~~f~v~~G~D~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~ 262 (315)
T 3na8_A 184 VKESTGDIQRMHKLRLLGEGRVPFYNGCNPLALEA-FVAGAKGWCSAAPNLIPTLNGQLYQAVLDGDLEKARALFYRQLP 262 (315)
T ss_dssp EEECSSCHHHHHHHHHHTTTCSCEEECCGGGHHHH-HHHTCSEEEESGGGTCHHHHHHHHHHHHTTBHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEeCchHHHHHH-HHCCCCEEEechhhhCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999983 3 3444567899999999988765 8999999999999999999999986 565 6789999999
Q ss_pred HHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018253 285 LIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 336 (359)
Q Consensus 285 l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl 336 (359)
+++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++|+++|.
T Consensus 263 l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~g~ 314 (315)
T 3na8_A 263 LLDFILRRGLPTTIKAGLGLSGLEVGAPRLPVQALDTEGCRYLQGLLEELRG 314 (315)
T ss_dssp HHHHHHHHCHHHHHHHHHHHTTCCCCCCCTTSCCCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHccCcHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999988888999999999999988999999999999999999999999863
No 11
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=100.00 E-value=2.7e-69 Score=519.16 Aligned_cols=277 Identities=32% Similarity=0.534 Sum_probs=263.0
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC-CcEEEEecCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGS 136 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g-rvpViagvg~ 136 (359)
+++|++++++||| +||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.++| |+|||+|+|+
T Consensus 8 ~~~Gv~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~ 86 (301)
T 3m5v_A 8 IIIGAMTALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGS 86 (301)
T ss_dssp CCCEEEEECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCC
T ss_pred cCCceeEeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC
Confidence 4899999999999 9999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcC-CCeE
Q 018253 137 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQS-PNLA 213 (359)
Q Consensus 137 ~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~-pniv 213 (359)
++|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++ |||+
T Consensus 87 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pniv 166 (301)
T 3m5v_A 87 NATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIY 166 (301)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEE
Confidence 9999999999999999999999999999999999999999999997 799999999999999999999999987 9999
Q ss_pred EEeccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHH
Q 018253 214 GVKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLF 283 (359)
Q Consensus 214 GiK~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~ 283 (359)
|||++++|. + +.+.. ++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.
T Consensus 167 giKdssgd~~~~~~~~~~~-~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~ 244 (301)
T 3m5v_A 167 GVKEASGNIDKCVDLLAHE-PRMMLISGEDAINYPI-LSNGGKGVISVTSNLLPDMISALTHFALDENYKEAKKINDELY 244 (301)
T ss_dssp EEEECSSCHHHHHHHHHHC-TTSEEEECCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHTH
T ss_pred EEEeCCCCHHHHHHHHHhC-CCeEEEEccHHHHHHH-HHcCCCEEEehHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 999999983 3 44444 8899999999988865 8999999999999999999999996 475 678999999
Q ss_pred HHHHHHhcCCChHHHHHHHHHcCCC-CCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 284 PLIEWLFQEPNPIPLNTALAQLGVV-RPVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 284 ~l~~~l~~~~~~~~~K~al~~~G~~-~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
++++.++..+++..+|++|+++|++ .+.+|+|+.+++++++++|+++++++|+.
T Consensus 245 ~l~~~~~~~~~~~~~K~al~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~l~ 299 (301)
T 3m5v_A 245 NINKILFCESNPIPIKTAMYLAGLIESLEFRLPLCSPSKENFAKIEEVMKKYKIK 299 (301)
T ss_dssp HHHHHTTSSSTTHHHHHHHHHTTSSSCCCCCTTCCCCCHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHhccCCHHHHHHHHHHCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHCcCc
Confidence 9999998888999999999999998 89999999999999999999999999875
No 12
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=100.00 E-value=3.2e-69 Score=516.66 Aligned_cols=277 Identities=34% Similarity=0.552 Sum_probs=260.7
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++|||++||+||+++++++++|++++|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|++|
T Consensus 2 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 81 (292)
T 2ojp_A 2 FTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANA 81 (292)
T ss_dssp CCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred CCceeeeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK 216 (359)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK 161 (292)
T 2ojp_A 82 TAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIX 161 (292)
T ss_dssp HHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTSTTEEEC-
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcCCCEEEEe
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999999999999
Q ss_pred ccCchh-hH---hhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018253 217 ECVGND-RV---EHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 286 (359)
Q Consensus 217 ~ss~d~-~l---~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l~ 286 (359)
++++|. ++ .+..+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 162 ~s~gd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 240 (292)
T 2ojp_A 162 EATGNLTRVNQIKELVSDDFVLLSGDDASALDF-MQYGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINERLMPLH 240 (292)
T ss_dssp CCSCCTHHHHHHHTTSCTTSBCEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEECcHHHHHHH-HHCCCcEEEeCHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 33 333456899999999988865 8999999999999999999999986 575 678999999999
Q ss_pred HHHhcCCChHHHHHHHHHcCCCC-CCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018253 287 EWLFQEPNPIPLNTALAQLGVVR-PVFRLPYVPLPQEKRAEFVNLVNQIGR 336 (359)
Q Consensus 287 ~~l~~~~~~~~~K~al~~~G~~~-g~~R~Pl~~l~~e~~~~i~~~l~~lgl 336 (359)
+.++..+++..+|++|+++|++. +.+|+|+.+++++++++++++++++++
T Consensus 241 ~~~~~~~~~~~~K~al~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 291 (292)
T 2ojp_A 241 NKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGL 291 (292)
T ss_dssp HHTTSSSTTHHHHHHHHHTTSSSCCCCCTTSCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHhcCCCHHHHHHHHHHcCCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 98888888999999999999987 899999999999999999999999875
No 13
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=100.00 E-value=2.1e-69 Score=520.50 Aligned_cols=279 Identities=28% Similarity=0.440 Sum_probs=263.8
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 137 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~ 137 (359)
+++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|++
T Consensus 15 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~ 94 (304)
T 3l21_A 15 RLGTLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTY 94 (304)
T ss_dssp HHCSEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS
T ss_pred cCCceEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEE
Q 018253 138 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGV 215 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGi 215 (359)
+|+++++++++|+++|||+++++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+||
T Consensus 95 ~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgi 174 (304)
T 3l21_A 95 DTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGV 174 (304)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEE
Confidence 999999999999999999999999999999999999999999997 799999999999999999999999999999999
Q ss_pred eccCchh-hHhhh-hCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHHH
Q 018253 216 KECVGND-RVEHY-TGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLIE 287 (359)
Q Consensus 216 K~ss~d~-~l~~~-~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l~~ 287 (359)
|++++|. ++.++ ..++|.+|+|.|+++++. +..|++|+||+++|++|++++++|+ +|| ++++|+++.++++
T Consensus 175 Kdssgd~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~Ga~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~ 253 (304)
T 3l21_A 175 XDAKADLHSGAQIMADTGLAYYSGDDALNLPW-LRMGATGFISVIAHLAAGQLRELLSAFGSGDIATARKINIAVAPLCN 253 (304)
T ss_dssp EECSCCHHHHHHHHHHHCCEEEESSGGGHHHH-HHHTCCEEEESTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred ECCCCCHHHHHHHhcCCCeEEEeCchHHHHHH-HHcCCCEEEecHHhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 9999984 43332 356899999999988865 8999999999999999999999986 475 6789999999999
Q ss_pred HHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 288 WLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 288 ~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+.
T Consensus 254 ~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~l~ 303 (304)
T 3l21_A 254 AMSRLGGVTLSKAGLRLQGIDVGDPRLPQVAATPEQIDALAADMRAASVL 303 (304)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCCTTSCCCCHHHHHHHHHHHHHTTSC
T ss_pred HHHccCCHHHHHHHHHhcCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 98888889999999999999889999999999999999999999999864
No 14
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=100.00 E-value=3.5e-69 Score=520.44 Aligned_cols=281 Identities=31% Similarity=0.548 Sum_probs=266.2
Q ss_pred cccCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018253 56 DIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG 135 (359)
Q Consensus 56 ~~~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg 135 (359)
+++++|++++++|||++||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++++++|+|||+|+|
T Consensus 5 ~~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg 84 (311)
T 3h5d_A 5 DLKECKIITAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG 84 (311)
T ss_dssp HHTTCCEEEECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC
T ss_pred ccccCceEEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCC-CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCe
Q 018253 136 SNSTREAIHATEQGFAVGM-HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNL 212 (359)
Q Consensus 136 ~~st~~ai~la~~a~~~Ga-dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pni 212 (359)
+++|+++++++++|+++|+ |++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||
T Consensus 85 ~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnI 164 (311)
T 3h5d_A 85 TNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADHPNI 164 (311)
T ss_dssp CSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTE
T ss_pred CcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCE
Confidence 9999999999999999997 9999999999999999999999999997 799999999999999999999999999999
Q ss_pred EEEeccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHH
Q 018253 213 AGVKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKL 282 (359)
Q Consensus 213 vGiK~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l 282 (359)
+|||+++ |. + +.+..+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++
T Consensus 165 vgiKdss-d~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~Ga~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l 242 (311)
T 3h5d_A 165 IGVKECT-SLANMAYLIEHKPEEFLIYTGEDGDAFHA-MNLGADGVISVASHTNGDEMHEMFTAIAESDMKKAAAIQRKF 242 (311)
T ss_dssp EEEEECS-CHHHHHHHHHHCCSSCEEEECCGGGHHHH-HHHTCCEEEESTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred EEEEeCC-CHHHHHHHHHHcCCCEEEEECcHHHHHHH-HHcCCCEEEechhhhCHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 9999999 83 3 3344567899999999988865 8999999999999999999999986 575 67899999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCccc
Q 018253 283 FPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGREN 338 (359)
Q Consensus 283 ~~l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~~ 338 (359)
.++++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++|+++++++
T Consensus 243 ~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~~ 298 (311)
T 3h5d_A 243 IPKVNALFSYPSPAPVKAILNYMGFEAGPTRLPLVPAPEEDVKRIIKVVVDGDYEA 298 (311)
T ss_dssp HHHHHHHTSSSTTHHHHHHHHHHTSCCCCCCTTCCCCCHHHHHHHHHHHSCCCCCC
T ss_pred HHHHHHHHccCCHHHHHHHHHHCCCCCCCcCCCCCCCCHHHHHHHHHHHHHccchh
Confidence 99999999988999999999999998899999999999999999999999999886
No 15
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=7.4e-69 Score=514.55 Aligned_cols=277 Identities=35% Similarity=0.555 Sum_probs=261.6
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++|||+ ||+||+++++++++|++++|++|++++|||||+++||.+||+++++.+++.++||+|||+|+|++|
T Consensus 2 ~~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~ 80 (294)
T 2ehh_A 2 FQGSIVALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNA 80 (294)
T ss_dssp CCEEEEECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSC
T ss_pred CCceeeeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 6899999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEE
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 215 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La-~~pnivGi 215 (359)
|+++++++++|+++|||++|++||||+++|++++++||++|+++ +||++||+|++||++++++++.+|+ ++|||+||
T Consensus 81 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgi 160 (294)
T 2ehh_A 81 THEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVAS 160 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999 99999999
Q ss_pred eccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018253 216 KECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 285 (359)
Q Consensus 216 K~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l 285 (359)
|++++|. + +.+..+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 161 Kds~gd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 239 (294)
T 2ehh_A 161 KESTPNMDRISEIVKRLGESFSVLSGDDSLTLPM-MALGAKGVISVANNVMPREVKELIRAALEGDFRRAREIHYYLHDL 239 (294)
T ss_dssp EECCSCHHHHHHHHHHHCTTSEEEESSGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHhcCCCeEEEECcHHHHHHH-HHCCCCEEEeCHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 3 3344567899999999988864 8999999999999999999999986 575 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 286 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 286 ~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++++++++++++.
T Consensus 240 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~ 291 (294)
T 2ehh_A 240 FKVLFIETNPIPVKTACWMLGMCEKEFRLPLTEMSPENENKLREVLKKYNLP 291 (294)
T ss_dssp HHHTTSSSTTHHHHHHHHHTTSSCSCCCTTCCCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHhCcc
Confidence 9988877889999999999999889999999999999999999999998864
No 16
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=100.00 E-value=4.7e-69 Score=515.20 Aligned_cols=276 Identities=31% Similarity=0.501 Sum_probs=259.9
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++|||++|| ||+++++++++|++++|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 3 ~~Gv~~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~ 81 (291)
T 3a5f_A 3 FKGSGVAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNN 81 (291)
T ss_dssp CCEEEEECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred CCceeeeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCccc
Confidence 6899999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK 216 (359)
|+++++++++|+++|||++|++||||+++|++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 82 t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK 161 (291)
T 3a5f_A 82 TAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCEDKNIVAVX 161 (291)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEe
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999999999999
Q ss_pred ccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018253 217 ECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 286 (359)
Q Consensus 217 ~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l~ 286 (359)
++++|. + +.+..+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 162 ~s~gd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 240 (291)
T 3a5f_A 162 EASGNISQIAQIKALCGDKLDIYSGNDDQIIPI-LALGGIGVISVLANVIPEDVHNMCELYLNGKVNEALKIQLDSLALT 240 (291)
T ss_dssp ECSCCHHHHHHHHHHHGGGSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHTHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCeEEEeCcHHHHHHH-HHCCCCEEEecHHHhcHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3 3334457899999999988875 8999999999999999999999986 575 678999999999
Q ss_pred HHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018253 287 EWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 336 (359)
Q Consensus 287 ~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl 336 (359)
+.++..+++..+|++|+++|++.+.+|+|+.+++++++++++++++++|+
T Consensus 241 ~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 290 (291)
T 3a5f_A 241 NALFIETNPIPVKTAMNLMNMKVGDLRLPLCEMNENNLEILKKELKAYNL 290 (291)
T ss_dssp HHTTSSSTTHHHHHHHHHTTCCCCCCCTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHhcCCCHHHHHHHHHHhCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 98888888999999999999988999999999999999999999999875
No 17
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=100.00 E-value=6.5e-69 Score=515.60 Aligned_cols=278 Identities=31% Similarity=0.497 Sum_probs=261.4
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++||| +||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|++|
T Consensus 2 ~~Gv~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~ 80 (297)
T 2rfg_A 2 FRGSLIAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNN 80 (297)
T ss_dssp CCEEEEECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSS
T ss_pred CceEEEeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCC
Confidence 689999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK 216 (359)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 81 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK 160 (297)
T 2rfg_A 81 PVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGVK 160 (297)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999999999999
Q ss_pred ccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018253 217 ECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 286 (359)
Q Consensus 217 ~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l~ 286 (359)
++++|. + +.+..+++|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 161 ds~gd~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 239 (297)
T 2rfg_A 161 DATTDLARISRERMLINKPFSFLSGDDMTAIAY-NASGGQGCISVSANIAPALYGQMQTATLQGDFREALRIHDLLAPLH 239 (297)
T ss_dssp ECSCCTTHHHHHHTTCCSCCEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHhcCCCEEEEeCcHHHHHHH-HHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3 3333456899999999988864 8999999999999999999999986 475 678999999999
Q ss_pred HHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCccc
Q 018253 287 EWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGREN 338 (359)
Q Consensus 287 ~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~~ 338 (359)
+.++..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++++..
T Consensus 240 ~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~~ 291 (297)
T 2rfg_A 240 EALFREPSPAGAKYAASLLGLCNEECRLPIVPLSEQTKSDIKNIINELYRLE 291 (297)
T ss_dssp HHHHSSSTTHHHHHHHHHTTSSCCCCCTTSCCCCHHHHHHHHHHHHHHCC--
T ss_pred HHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHhcchhh
Confidence 9888888899999999999998899999999999999999999999999764
No 18
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=100.00 E-value=1.5e-68 Score=512.28 Aligned_cols=276 Identities=21% Similarity=0.315 Sum_probs=259.0
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHH-CCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIV-NGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 136 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~-~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~ 136 (359)
+++|++++++|||++||+||+++++++++|+++ +|++||+++|||||+++||.+||+++++.+++.++||+|||+|+|+
T Consensus 3 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 82 (293)
T 1f6k_A 3 DLKGIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGS 82 (293)
T ss_dssp CCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC
T ss_pred CCCceEEeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC
Confidence 479999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEE
Q 018253 137 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAG 214 (359)
Q Consensus 137 ~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivG 214 (359)
++|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|
T Consensus 83 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 162 (293)
T 1f6k_A 83 VNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPKVLG 162 (293)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcCCCEEE
Confidence 9999999999999999999999999999999999999999999997 79999999999999999999999999999999
Q ss_pred EeccCchh-hHhhh--hCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018253 215 VKECVGND-RVEHY--TGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 285 (359)
Q Consensus 215 iK~ss~d~-~l~~~--~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l 285 (359)
||++++|. ++.++ ..++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 163 iK~s~gd~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 241 (293)
T 1f6k_A 163 VKFTAGDFYLLERLKKAYPNHLIWAGFDEMMLPA-ASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVTNDL 241 (293)
T ss_dssp EEECSCCHHHHHHHHHHCTTSEEEECCGGGHHHH-HHTTCSEEEESTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHhCCCeEEEECcHHHHHHH-HHCCCcEEEeCHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 99999984 33322 146899999999988764 8999999999999999999999986 575 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHc
Q 018253 286 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPY-VPLPQEKRAEFVNLVNQI 334 (359)
Q Consensus 286 ~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl-~~l~~e~~~~i~~~l~~l 334 (359)
++.++..+++..+|++|+++|++.+.+|+|+ .+++++++++|+++++++
T Consensus 242 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~~l~~~~~~~l~~~l~~~ 291 (293)
T 1f6k_A 242 IEGILANGLYLTIKELLKLEGVDAGYCREPMTSKATAEQVAKAKDLKAKF 291 (293)
T ss_dssp HHHHHHHCHHHHHHHHHHHTTCCCBCCCTTSCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCCHHHHHHHHHHHHHh
Confidence 9988776678999999999999888999999 999999999999999874
No 19
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=100.00 E-value=1.8e-68 Score=510.78 Aligned_cols=274 Identities=36% Similarity=0.579 Sum_probs=259.0
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++|||+ ||+||+++++++++|++++|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 2 ~~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 80 (289)
T 2yxg_A 2 FKGVYPAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNC 80 (289)
T ss_dssp CCEEEEBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSS
T ss_pred CCceeeeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCC
Confidence 6899999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEE
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 215 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La-~~pnivGi 215 (359)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+ ++|||+||
T Consensus 81 t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgi 160 (289)
T 2yxg_A 81 TEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAV 160 (289)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999 99999999
Q ss_pred eccCchh-hH---hhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018253 216 KECVGND-RV---EHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 285 (359)
Q Consensus 216 K~ss~d~-~l---~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l 285 (359)
|++++|. ++ .+.. +|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 161 K~s~gd~~~~~~~~~~~--~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 237 (289)
T 2yxg_A 161 KEANPNLSQVSELIHDA--KITVLSGNDELTLPI-IALGGKGVISVVANIVPKEFVEMVNYALEGDFEKAREIHYKLFPL 237 (289)
T ss_dssp EECCSCTHHHHHHHHHT--CSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHhC--CeEEEECcHHHHHHH-HHCCCCEEEeChhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 33 3333 899999999988864 8999999999999999999999986 575 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018253 286 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 336 (359)
Q Consensus 286 ~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl 336 (359)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++++++++++|+
T Consensus 238 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 288 (289)
T 2yxg_A 238 MKAMFIETNPIPVKTALNMMGRPAGELRLPLCEMSEEHKKILENVLKDLGL 288 (289)
T ss_dssp HHHTTSSSTTHHHHHHHHHTTCSCCCCCTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCHHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 998888888999999999999988999999999999999999999999875
No 20
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=100.00 E-value=2e-68 Score=514.22 Aligned_cols=276 Identities=35% Similarity=0.569 Sum_probs=260.3
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++|||+ ||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|++|
T Consensus 14 ~~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~s 92 (306)
T 1o5k_A 14 FRGVGTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNS 92 (306)
T ss_dssp CSEEEEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSC
T ss_pred cCCeeeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCcc
Confidence 8999999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEE
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 215 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La-~~pnivGi 215 (359)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+ ++|||+||
T Consensus 93 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgi 172 (306)
T 1o5k_A 93 TEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGI 172 (306)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999 99999999
Q ss_pred eccCchh-h---HhhhhCC---ceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHH
Q 018253 216 KECVGND-R---VEHYTGN---GIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKL 282 (359)
Q Consensus 216 K~ss~d~-~---l~~~~~~---~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l 282 (359)
|++++|. + +.+..++ +|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++
T Consensus 173 Kdssgd~~~~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l 251 (306)
T 1o5k_A 173 XEANPDIDQIDRTVSLTKQARSDFMVWSGNDDRTFYL-LCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSREVHRKL 251 (306)
T ss_dssp EECCCCHHHHHHHHHHHHHHCTTCEEEESSGGGHHHH-HHHTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHhcCCCCCcEEEEECcHHHHHHH-HHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 9999983 3 3333334 899999999988865 8999999999999999999999986 575 67899999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018253 283 FPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 336 (359)
Q Consensus 283 ~~l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl 336 (359)
.++++.++..+++..+|++|+++|++.+.+|+|+.+++++++++++++++++|+
T Consensus 252 ~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~ 305 (306)
T 1o5k_A 252 RPLMKALFVETNPIPVKAALNLMGFIENELRLPLVPASEKTVELLRNVLKESGL 305 (306)
T ss_dssp HHHHHHTTSSSTTHHHHHHHHHTTSSCCCCCTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHhcCC
Confidence 999998888888999999999999988999999999999999999999999875
No 21
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.8e-68 Score=510.04 Aligned_cols=277 Identities=34% Similarity=0.517 Sum_probs=261.3
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++||| +||+||+++++++++|++++|++|++++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 2 ~~Gv~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 80 (292)
T 2vc6_A 2 FEGSITALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNS 80 (292)
T ss_dssp CCEEEEECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSS
T ss_pred CCcEEEeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCcc
Confidence 689999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCeEEE
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAGV 215 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~-~pnivGi 215 (359)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|++ +|||+|+
T Consensus 81 t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgi 160 (292)
T 2vc6_A 81 TAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGV 160 (292)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEE
Confidence 99999999999999999999999999999999999999999997 79999999999999999999999998 9999999
Q ss_pred eccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHH
Q 018253 216 KECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPL 285 (359)
Q Consensus 216 K~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l 285 (359)
|++++|. + +.+..+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++
T Consensus 161 K~s~gd~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l 239 (292)
T 2vc6_A 161 XDATGNLLRPSLERMACGEDFNLLTGEDGTALGY-MAHGGHGCISVTANVAPALCADFQQACLNGDFAAALKLQDRLMPL 239 (292)
T ss_dssp EECSCCTHHHHHHHHHSCTTSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHcCCCEEEEECchHHHHHH-HHcCCCEEEecHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9999983 3 3344467899999999988865 8999999999999999999999986 575 67899999999
Q ss_pred HHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 286 IEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 286 ~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
++.++..+++..+|++|+++|++.+.+|+|+.+++++++++++++++++++.
T Consensus 240 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~ 291 (292)
T 2vc6_A 240 HRALFLETNPAGAKYALQRLGRMRGDLRLPLVTISPSFQEEIDDAMRHAGIL 291 (292)
T ss_dssp HHHTTSSSTTHHHHHHHHHTTSSCCCCCTTCCCCCHHHHHHHHHHHHHTTSC
T ss_pred HHHHhcCCCHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHhcCcc
Confidence 9988888889999999999999889999999999999999999999998753
No 22
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=100.00 E-value=2.2e-68 Score=510.79 Aligned_cols=276 Identities=30% Similarity=0.492 Sum_probs=259.7
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++|||++| +||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|++|
T Consensus 4 ~~Gi~~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~ 82 (292)
T 3daq_A 4 FEGVGVALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTND 82 (292)
T ss_dssp CCEEEEECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSC
T ss_pred CCeEEEeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCccc
Confidence 799999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK 216 (359)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++++++++.+|+++|||+|||
T Consensus 83 t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK 162 (292)
T 3daq_A 83 TEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALK 162 (292)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEE
Confidence 99999999999999999999999999999999999999999996 7999999999999999999999999999999999
Q ss_pred ccCchh-hH---hhhhCC-ceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cC-CcHHHHHHHHHHHH
Q 018253 217 ECVGND-RV---EHYTGN-GIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GG-KNPSLNTKLFPLIE 287 (359)
Q Consensus 217 ~ss~d~-~l---~~~~~~-~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag-~a~~l~~~l~~l~~ 287 (359)
++++|. ++ .+..++ +|.+|+|.|+++++. +..|++|+||+++|++|++++++|+ +| |..+..+++.++++
T Consensus 163 ~ssgd~~~~~~~~~~~~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~g~d~~~A~~~l~~l~~ 241 (292)
T 3daq_A 163 DATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEY-YQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFKPIGTLLS 241 (292)
T ss_dssp ECCCCHHHHHHHHTTSCTTTSEEEESCGGGHHHH-HHTTCCEEEESGGGTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHH-HhcCCCEEEeCHHHhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 999983 33 333455 899999999998875 8999999999999999999999986 58 75544449999999
Q ss_pred HHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCc
Q 018253 288 WLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGR 336 (359)
Q Consensus 288 ~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl 336 (359)
.++..+++..+|++|+++|+..+.+|+|+.+++++++++|+++++++|+
T Consensus 242 ~~~~~~~~~~~K~~l~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~l 290 (292)
T 3daq_A 242 ALSVDINPIPIKALTSYLGFGNYELRLPLVSLEDTDTKVLREAYDTFKA 290 (292)
T ss_dssp HHTTSSTTTTHHHHHHHTTSSBSCCCTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHhccCCcHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 9988888888999999999988999999999999999999999999875
No 23
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=100.00 E-value=5.3e-68 Score=510.58 Aligned_cols=276 Identities=23% Similarity=0.371 Sum_probs=259.3
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 137 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~ 137 (359)
+++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|++
T Consensus 11 ~~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~ 90 (303)
T 2wkj_A 11 NLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCV 90 (303)
T ss_dssp GGCSEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS
T ss_pred CCCceEEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEE
Q 018253 138 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAG 214 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a---~PiiiYn~P~~tg~~ls~e~l~~La~~pnivG 214 (359)
+|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++|+++++.+|+++|||+|
T Consensus 91 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvg 170 (303)
T 2wkj_A 91 STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA 170 (303)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEE
T ss_pred CHHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEE
Confidence 999999999999999999999999999999999999999999986 79999999999999999999999999999999
Q ss_pred EeccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHH
Q 018253 215 VKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFP 284 (359)
Q Consensus 215 iK~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~ 284 (359)
||++++|. + +.+. .++|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+
T Consensus 171 iK~s~gd~~~~~~~~~~-~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~ 248 (303)
T 2wkj_A 171 LXQTSGDLYQMEQIRRE-HPDLVLYNGYDNIFASG-LLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNK 248 (303)
T ss_dssp EEECCCCHHHHHHHHHH-CTTCEEEECCGGGHHHH-HHHTCCEEEETTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHh-CCCeEEEeCcHHHHHHH-HHCCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 99999983 3 3333 56899999999988764 8999999999999999999999986 575 6789999999
Q ss_pred HHHHHhcCCChHHHHHHHHHcCCCCC-CCCCCCCCCCHHHHHHHHHHHHHcC
Q 018253 285 LIEWLFQEPNPIPLNTALAQLGVVRP-VFRLPYVPLPQEKRAEFVNLVNQIG 335 (359)
Q Consensus 285 l~~~l~~~~~~~~~K~al~~~G~~~g-~~R~Pl~~l~~e~~~~i~~~l~~lg 335 (359)
+++.++..+++..+|++|+++|++.+ .+|+|+.+++++++++|+++++++.
T Consensus 249 l~~~~~~~~~~~~~K~al~~~G~~~g~~~R~Pl~~l~~~~~~~l~~~l~~~~ 300 (303)
T 2wkj_A 249 VIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLM 300 (303)
T ss_dssp HHHHHHHHCHHHHHHHHHHHTTSCSSCCCCTTSCCCCGGGHHHHHHHHHHHH
T ss_pred HHHHHhccCCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 99988777788999999999999888 9999999999999999999998753
No 24
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=5.1e-68 Score=516.39 Aligned_cols=278 Identities=21% Similarity=0.230 Sum_probs=259.7
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 35 ~~Gv~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 114 (332)
T 2r8w_A 35 FKGLSAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALR 114 (332)
T ss_dssp GCEEEECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSS
T ss_pred cCCeeEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK 216 (359)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++|+++++.+|+++|||+|||
T Consensus 115 t~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvgiK 194 (332)
T 2r8w_A 115 TDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIK 194 (332)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999999999999
Q ss_pred ccCch----h-hHh---hhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHH
Q 018253 217 ECVGN----D-RVE---HYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKL 282 (359)
Q Consensus 217 ~ss~d----~-~l~---~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l 282 (359)
++++| . ++. +..+++|.||+|.|.++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++
T Consensus 195 dssgd~~~~~~~~~~l~~~~~~~f~v~~G~D~~~l~~-l~~G~~G~is~~anv~P~~~~~l~~a~~~Gd~~~A~~l~~~l 273 (332)
T 2r8w_A 195 MPLPADADYAGELARLRPKLSDDFAIGYSGDWGCTDA-TLAGGDTWYSVVAGLLPVPALQLMRAAQAGNAEEAKRLDATF 273 (332)
T ss_dssp ECCCTTCCHHHHHHHHTTTSCTTCEEEECCHHHHHHH-HHTTCSEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred eCCCCchhHHHHHHHHHHhcCCCEEEEeCchHHHHHH-HHCCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 99998 4 333 33456899999999988764 8999999999999999999999986 575 67899999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 283 FPLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 283 ~~l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
.++++.++..+++..+|++|+++|++.+.+|+|+.+++++++++|++++++++..
T Consensus 274 ~~l~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~ 328 (332)
T 2r8w_A 274 QPLWALFKEFGSIRVIYAAANILSLTVSEPPRPILPLTSAERQRVEEALEALSAL 328 (332)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHTTSCCCCCCTTSCCCCHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHhcCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcchh
Confidence 9999987555578899999999999888999999999999999999999998754
No 25
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=100.00 E-value=5.9e-68 Score=517.94 Aligned_cols=278 Identities=24% Similarity=0.397 Sum_probs=261.8
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|+++
T Consensus 32 ~~Gv~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s 111 (343)
T 2v9d_A 32 FTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTN 111 (343)
T ss_dssp SCEECCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSC
T ss_pred cCCeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEE
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 215 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La-~~pnivGi 215 (359)
|+++++++++|+++|||++|++||||++++++++++||++|+++ +||++||+|++||++|+++++.+|+ ++|||+||
T Consensus 112 t~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnIvgi 191 (343)
T 2v9d_A 112 ARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGI 191 (343)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCEEEE
Confidence 99999999999999999999999999999999999999999997 7999999999999999999999999 99999999
Q ss_pred eccCchh-h---HhhhhC---CceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHH
Q 018253 216 KECVGND-R---VEHYTG---NGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKL 282 (359)
Q Consensus 216 K~ss~d~-~---l~~~~~---~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l 282 (359)
|++++|. + +.+..+ ++|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++
T Consensus 192 Kdssgd~~~~~~l~~~~~~~~~~f~v~~G~D~~~l~~-l~~Ga~G~is~~anv~P~~~~~l~~a~~~Gd~~~A~~l~~~l 270 (343)
T 2v9d_A 192 KDTIDSVAHLRSMIHTVKGAHPHFTVLCGYDDHLFNT-LLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTL 270 (343)
T ss_dssp EECCSCHHHHHHHHHHHHHHCTTCEEEESSGGGHHHH-HHTTCCEECCGGGTTCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHhcCCCCCCEEEEECcHHHHHHH-HHCCCCEEEeCHHHhHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 9999983 3 333334 7899999999988865 8999999999999999999999986 575 67899999
Q ss_pred HHHHHHHhcCCC-hHHHHHHHHHcCCCC-CCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 283 FPLIEWLFQEPN-PIPLNTALAQLGVVR-PVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 283 ~~l~~~l~~~~~-~~~~K~al~~~G~~~-g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
.++++.++..++ +..+|++|+++|++. +.+|+|+.+++++++++|+++++++++.
T Consensus 271 ~~l~~~~~~~~~~~~~iK~al~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~ 327 (343)
T 2v9d_A 271 LQIPQMYQLDTPFVNVIKEAIVLCGRPVSTHVLPPASPLDEPRKAQLKTLLQQLKLC 327 (343)
T ss_dssp HHGGGGGGGSSSCHHHHHHHHHHTTCCCCCCCCTTSCCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCChHHHHHHHHHHCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHhCcc
Confidence 999998887777 899999999999987 8999999999999999999999998864
No 26
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=4.1e-66 Score=495.50 Aligned_cols=271 Identities=22% Similarity=0.349 Sum_probs=255.7
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCH
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 139 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st 139 (359)
+|++++++|||++||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|+++|
T Consensus 5 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t 84 (294)
T 3b4u_A 5 FGLSAALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSI 84 (294)
T ss_dssp CEEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSH
T ss_pred CcEEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCCC-CCHHHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHh-cCCC-
Q 018253 140 REAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMA-QSPN- 211 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~y~~-~s~~~l~~yf~~Ia~a-----~PiiiYn~P~~tg~~ls~e~l~~La-~~pn- 211 (359)
+++++++++|+++|||++|++||||++ ++++++++||++|+++ +||++||+|++||++++++++.+|+ ++||
T Consensus 85 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ 164 (294)
T 3b4u_A 85 EDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGI 164 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCc
Confidence 999999999999999999999999999 9999999999999974 6999999999999999999999999 9999
Q ss_pred eEEEeccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHHcCCcHHHHHHHHHHHH
Q 018253 212 LAGVKECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMFGGKNPSLNTKLFPLIE 287 (359)
Q Consensus 212 ivGiK~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~ag~a~~l~~~l~~l~~ 287 (359)
|+|||++++|. + +.+..+ +|.||+|.|+++++. +..|++|+||+++|++|+.++++|+ + +++|+++.++++
T Consensus 165 ivgiKds~gd~~~~~~~~~~~~-~f~v~~G~d~~~l~~-l~~G~~G~is~~~n~~P~~~~~l~~--~-~~l~~~l~~l~~ 239 (294)
T 3b4u_A 165 VTGVKDSSGNWSHTERLLKEHG-DLAILIGDERDLARG-VRLGGQGAISGVANFLTQEVRAMAV--D-GKDDPRIVDLVV 239 (294)
T ss_dssp EEEEEECCCCHHHHHHHHHHHT-TSEEEECCHHHHHHH-HHTTCCEEEESGGGTCHHHHHHHHT--T-CCCCHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHhCC-CeEEEEccHHHHHHH-HHCCCCEEEeCHHHhCHHHHHHHHH--H-HHHHHHHHHHHH
Confidence 99999999983 3 333345 899999999988864 8999999999999999999999998 3 889999999999
Q ss_pred HHhcCCChHHHHHHHHH-cC-CCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 018253 288 WLFQEPNPIPLNTALAQ-LG-VVRPVFRLPYVPLPQEKRAEFVNLVNQIG 335 (359)
Q Consensus 288 ~l~~~~~~~~~K~al~~-~G-~~~g~~R~Pl~~l~~e~~~~i~~~l~~lg 335 (359)
.++..+++..+|++|++ +| +..+.+|+|+.+++++++++|+++++++.
T Consensus 240 ~~~~~~~~~~~K~al~~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~ 289 (294)
T 3b4u_A 240 ELLKFPVTPAVKVLVSHTTGETIWSDVRAPLVAISPEDRRQIEGAFDALF 289 (294)
T ss_dssp HHTTSCHHHHHHHHHHHHHCCGGGGCCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred HHhccCCHHHHHHHHHHhCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 88888888999999999 99 67789999999999999999999998853
No 27
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=100.00 E-value=1.5e-65 Score=495.76 Aligned_cols=276 Identities=20% Similarity=0.287 Sum_probs=255.7
Q ss_pred ccCCceEEeeecCC-CCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018253 57 IKALRLITAIKTPY-LPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG 135 (359)
Q Consensus 57 ~~~~Gi~~al~TPF-~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg 135 (359)
|+++|++++++||| ++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|
T Consensus 10 ~~~~Gv~~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg 89 (314)
T 3d0c_A 10 KRFSTISGINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG 89 (314)
T ss_dssp GGGSSEEECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred ccCCceEEeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC
Confidence 45899999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeE
Q 018253 136 SNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLA 213 (359)
Q Consensus 136 ~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pniv 213 (359)
+ ||+++++++++|+++|||++|++||||++++++++++||++|+++ +||++|| +||+ |+++++.+|+++|||+
T Consensus 90 ~-st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn---~tg~-l~~~~~~~La~~pnIv 164 (314)
T 3d0c_A 90 Y-SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF---KDAH-LSDDVIKELAPLDKLV 164 (314)
T ss_dssp S-SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE---CCTT-SCTHHHHHHTTCTTEE
T ss_pred c-CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe---CCCC-cCHHHHHHHHcCCCEE
Confidence 9 999999999999999999999999999999999999999999997 7999999 8999 9999999999999999
Q ss_pred EEeccCchh-h---HhhhhCC--ceEEEecCCc-hhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHH
Q 018253 214 GVKECVGND-R---VEHYTGN--GIVVWSGNDD-QCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNT 280 (359)
Q Consensus 214 GiK~ss~d~-~---l~~~~~~--~~~v~~G~d~-~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~ 280 (359)
|||++++|. + +.+..++ +|.||+|.|+ ++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+
T Consensus 165 giKdssgd~~~~~~~~~~~~~~~~f~v~~G~d~~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~ 243 (314)
T 3d0c_A 165 GIKYAINDIQRVTQVMRAVPKSSNVAFICGTAEKWAPFF-YHAGAVGFTSGLVNVFPQKSFALLEALEEGNQEKIWDVWE 243 (314)
T ss_dssp EEEECCCCHHHHHHHHHHSCGGGCCEEEETTHHHHHHHH-HHHTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHhcCCCCCEEEEEeCcHHHHHHH-HHcCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 999999984 3 3333455 8999999998 77764 8999999999999999999999986 575 678999
Q ss_pred HHHHHHHHHhcC-CC--hHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCccc
Q 018253 281 KLFPLIEWLFQE-PN--PIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGREN 338 (359)
Q Consensus 281 ~l~~l~~~l~~~-~~--~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~~ 338 (359)
++.++++.++.. .+ +..+|++|+++|++.+.+|+|+.+++++++++++++++++++..
T Consensus 244 ~l~~l~~~~~~~~~~~~~~~iK~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~~ 304 (314)
T 3d0c_A 244 DVVPFEDLRAKHNNGNNVVIIKEAMEQLGLRAGVTREPVNPLSPNDRLELEELLKSWNTQE 304 (314)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHTTCCCCCCCTTCCSCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHHCCCCCCCcCCCCCCCCHHHHHHHHHHHHHhchhh
Confidence 999999977663 33 56789999999998899999999999999999999999987654
No 28
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=100.00 E-value=3.9e-65 Score=491.84 Aligned_cols=276 Identities=19% Similarity=0.302 Sum_probs=254.1
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 137 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~ 137 (359)
+++|++++++|||++||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.++||+|||+|+|++
T Consensus 8 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 87 (309)
T 3fkr_A 8 RHRGIFPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHY 87 (309)
T ss_dssp SCCEECCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CCCceEEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCC---CCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cCCC
Q 018253 138 STREAIHATEQGFAVGMHAALHINPYY---GKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QSPN 211 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~pP~y---~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La-~~pn 211 (359)
+|+++++++++|+++|||++|++|||| ++++++++++||++|+++ +||++||+|. ||++++++++.+|+ ++||
T Consensus 88 ~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~-tg~~l~~~~~~~La~~~pn 166 (309)
T 3fkr_A 88 STQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA-SGTALSAPFLARMAREIEQ 166 (309)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG-GCCCCCHHHHHHHHHHSTT
T ss_pred hHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC-CCCCCCHHHHHHHHhhCCC
Confidence 999999999999999999999999999 689999999999999997 7999999997 99999999999999 5999
Q ss_pred eEEEe-ccCchh-hH---hhhhCCce-EEEecCCchh-hhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHH
Q 018253 212 LAGVK-ECVGND-RV---EHYTGNGI-VVWSGNDDQC-HDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSL 278 (359)
Q Consensus 212 ivGiK-~ss~d~-~l---~~~~~~~~-~v~~G~d~~~-~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l 278 (359)
|+||| ++++|. ++ .+..+++| .+|+|.|.+. ++ .+..|++|+|+ +|++|+.++++|+ +|| |+++
T Consensus 167 IvgiK~~~~~~~~~~~~~~~~~~~~~~~~~~G~d~~~l~~-~l~~G~~G~i~--~n~~P~~~~~l~~a~~~Gd~~~A~~l 243 (309)
T 3fkr_A 167 VAYFXIETPGAANKLRELIRLGGDAIEGPWDGEEAITLLA-DLHAGATGAMT--GGGFPDGIRPILEAWREGRHDDAYAR 243 (309)
T ss_dssp EEEEEECSSSHHHHHHHHHHHHGGGCCEEEECGGGTTHHH-HHHTTCCEECC--CSSCHHHHHHHHHHHHTTCHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHhcCCceeeecCCchHHHHHH-HHHCCCcEEEE--hhhhHHHHHHHHHHHHcCCHHHHHHH
Confidence 99999 677773 33 33345567 6899998864 45 58999999995 5999999999996 575 6789
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHcCC-CCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 279 NTKLFPLIEWLFQEPNPIPLNTALAQLGV-VRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 279 ~~~l~~l~~~l~~~~~~~~~K~al~~~G~-~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
|+++.+++++++..+++..+|++|+++|+ ..+.+|+|+.+++++++++|++++++++..
T Consensus 244 ~~~l~~l~~~~~~~~~~~~~K~al~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~ 303 (309)
T 3fkr_A 244 YQAWLPLINHENRQSGILTAKALMREGGVIASERPRHPMPELHPDTRAELLAIARRLDPL 303 (309)
T ss_dssp HHHHHHHHHHHHHTTGGGHHHHHHHHTTSSSCCCCCTTSCCCCHHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHhCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHhhHH
Confidence 99999999999888899999999999998 468899999999999999999999999843
No 29
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=100.00 E-value=2e-65 Score=495.50 Aligned_cols=277 Identities=22% Similarity=0.319 Sum_probs=248.8
Q ss_pred cCCceEEeeecCCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018253 58 KALRLITAIKTPYL-PDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 136 (359)
Q Consensus 58 ~~~Gi~~al~TPF~-~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~ 136 (359)
.++|++++++|||+ +||+||+++++++++|+++.|++||+++|||||+++||.+||+++++.+++.+++|+|||+|+|+
T Consensus 10 ~~~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~ 89 (318)
T 3qfe_A 10 PQPGIWCPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGA 89 (318)
T ss_dssp CCSEEEEECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCC
T ss_pred CCCCeEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 58999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCCC-C-CCHHHHHHHHHHHHhc--CCeEEEeCCCCC-CCCCCHHHHHHHhc-CC
Q 018253 137 NSTREAIHATEQGFAVGMHAALHINPYYG-K-TSLEGLISHFDSVLSM--GPTIIYNVPSRT-GQDIPPRVIHTMAQ-SP 210 (359)
Q Consensus 137 ~st~~ai~la~~a~~~Gadav~v~pP~y~-~-~s~~~l~~yf~~Ia~a--~PiiiYn~P~~t-g~~ls~e~l~~La~-~p 210 (359)
++|+++++++++|+++|||++|++||||+ + ++++++++||++|+++ +||++||+|++| |++++++++.+|++ +|
T Consensus 90 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~p 169 (318)
T 3qfe_A 90 HSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKNP 169 (318)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhCC
Confidence 99999999999999999999999999877 4 5899999999999997 799999999997 99999999999996 99
Q ss_pred CeEEEeccCchh-hH---hhhh-CCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHH
Q 018253 211 NLAGVKECVGND-RV---EHYT-GNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLN 279 (359)
Q Consensus 211 nivGiK~ss~d~-~l---~~~~-~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~ 279 (359)
||+|||++++|. ++ .+.. +++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| |+++|
T Consensus 170 nIvgiKdssgd~~~~~~~~~~~~~~~f~v~~G~d~~~l~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~ 248 (318)
T 3qfe_A 170 NVVGVKLTCASVGKITRLAATLPPAAFSVFGGQSDFLIGG-LSVGSAGCIAAFANVFPKTVSKIYELYKAGKVDQAMELH 248 (318)
T ss_dssp TEEEEEESSCCHHHHHHHHHHSCGGGCEEEESCGGGHHHH-HHTTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCEEEEEecHHHHHHH-HHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHH
Confidence 999999999983 33 3323 36899999999988865 8999999999999999999999996 475 67899
Q ss_pred HHHHHHHHHHhcCCChHHHHHHH-----HHcCCCC----CCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 280 TKLFPLIEWLFQEPNPIPLNTAL-----AQLGVVR----PVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 280 ~~l~~l~~~l~~~~~~~~~K~al-----~~~G~~~----g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
+++.+++.. ...++..+|++| +++|+.. +.+|+|+.+++++++++|+++|++++..
T Consensus 249 ~~l~~~~~~--~~~~~~~~K~al~~~~~~~~G~~~~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~ 313 (318)
T 3qfe_A 249 RKAALAESP--CKSGIATTKYAAAIFSAKAAGIEDAEEKLRPRKPYDPPSEAAKQEVRKVMAEVAAI 313 (318)
T ss_dssp HHHHHHTCC--C--CHHHHHHHHHHTHHHHTTCTTHHHHTSCSTTSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--HhcCCHHHHHHHHhhHHHhCCCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999988765 356888999975 6799954 6899999999999999999999998753
No 30
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=100.00 E-value=3.2e-65 Score=489.15 Aligned_cols=268 Identities=24% Similarity=0.286 Sum_probs=252.4
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCH
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 139 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st 139 (359)
+|++++++|||++||+||+++++++++|++++|++|++++|||||+++||.+||+++++.+++.+++ ||+|+|+++|
T Consensus 1 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g---viaGvg~~~t 77 (293)
T 1w3i_A 1 PEIITPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK---IIFQVGGLNL 77 (293)
T ss_dssp CEEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC---EEEECCCSCH
T ss_pred CCeEEEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC---EEEecCCCCH
Confidence 5899999999999999999999999999999999999999999999999999999999999999887 9999999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCCC-CCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 140 REAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~y~~-~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK 216 (359)
+++++++++|+++|||++|++||||++ ++++++++||++|+++ +||++||+|++||++++++++.+ +|||+|||
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~---~pnIvgiK 154 (293)
T 1w3i_A 78 DDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE---IGCFTGVK 154 (293)
T ss_dssp HHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH---HCCEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh---cCCEEEEE
Confidence 999999999999999999999999999 9999999999999997 79999999999999999999999 89999999
Q ss_pred ccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018253 217 ECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 286 (359)
Q Consensus 217 ~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l~ 286 (359)
++++|. + +.+ .+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 155 ds~gd~~~~~~~~~-~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 232 (293)
T 1w3i_A 155 DTIENIIHTLDYKR-LNPNMLVYSGSDMLIATV-ASTGLDGNVAAGSNYLPEVTVTIKKLAMERKIDEALKLQFLHDEVI 232 (293)
T ss_dssp ECCSCHHHHHHHHH-HCTTSEEEECCSTTHHHH-HHTTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHh-cCCCEEEEEccHHHHHHH-HHcCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3 444 577899999999988864 8999999999999999999999986 575 678999999999
Q ss_pred HHHhcCCC-hHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 018253 287 EWLFQEPN-PIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIG 335 (359)
Q Consensus 287 ~~l~~~~~-~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lg 335 (359)
+.++..++ +..+|++|+++|++.+.+|+|+.++++++++++++++++++
T Consensus 233 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~ 282 (293)
T 1w3i_A 233 EASRIFGSLSSNYVLTKYFQGYDLGYPRPPIFPLDDEEERQLIKKVEGIR 282 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSCCBCCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCChHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 98887766 88999999999998889999999999999999999999875
No 31
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=6e-66 Score=491.87 Aligned_cols=268 Identities=26% Similarity=0.367 Sum_probs=252.3
Q ss_pred eEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHH
Q 018253 62 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTRE 141 (359)
Q Consensus 62 i~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ 141 (359)
++++++|||++||+||+++++++++|++++ ++||+++|||||+++||.+||+++++.+++ |+|||+|+|++||++
T Consensus 2 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~----rvpviaGvg~~~t~~ 76 (283)
T 2pcq_A 2 ILPPIPTPFDREGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP----RKPFLVGLMEETLPQ 76 (283)
T ss_dssp EECEECCCBCTTCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC----SSCCEEEECCSSHHH
T ss_pred eeeeEeCCCCCCCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh----CCcEEEeCCCCCHHH
Confidence 789999999999999999999999999999 999999999999999999999999999887 899999999999999
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCCCC-CHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEeccCc
Q 018253 142 AIHATEQGFAVGMHAALHINPYYGKT-SLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECVG 220 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~pP~y~~~-s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK~ss~ 220 (359)
+++++++|+++|||++|++||||+++ +++++++||++|++.+||++||+|++||++++++++.+|+++|||+|+|++++
T Consensus 77 ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiKdssg 156 (283)
T 2pcq_A 77 AEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAEKMPLFLYHVPQNTKVDLPLEAVEALAPHPNVLGIKDSSG 156 (283)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHHHSCEEEEECHHHHCCCCCHHHHHHHTTSTTEEEEEECSC
T ss_pred HHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHhcCCCEEEEEECCC
Confidence 99999999999999999999999999 99999999999999789999999999999999999999999999999999999
Q ss_pred hh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHHHHHh
Q 018253 221 ND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLIEWLF 290 (359)
Q Consensus 221 d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l~~~l~ 290 (359)
|. + +.+ .+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.++++.++
T Consensus 157 d~~~~~~~~~-~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~~ 234 (283)
T 2pcq_A 157 DLSRIAFYQA-RLQEFRVYTGHAPTFLGA-LALGAEGGILAAANLAPRAYRALLDHFREGRLAEAQELQKKLFPLGDLLA 234 (283)
T ss_dssp CHHHHHHHHH-HCSSCEEEECCGGGHHHH-HHTTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh-cCCCEEEEECcHHHHHHH-HHcCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 83 3 444 567899999999988874 8999999999999999999999986 575 6789999999999877
Q ss_pred cCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHH--HHHHHHHHHcCcc
Q 018253 291 QEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKR--AEFVNLVNQIGRE 337 (359)
Q Consensus 291 ~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~--~~i~~~l~~lgl~ 337 (359)
..+++ .+|++|+++|++.+.+|+|+.+++++++ ++++++++++|+.
T Consensus 235 ~~~~~-~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~~~l~~~l~~~~~~ 282 (283)
T 2pcq_A 235 KGGVP-LLKQALRHLGLPAGYPRPPYPAESPLWERFLPVLEGLKEEGWV 282 (283)
T ss_dssp HHHHH-HHHHHHHHTTCCCCCCCTTSCSSCTTHHHHHHHHHHHHHTTCC
T ss_pred cCCcH-HHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhcCcc
Confidence 76778 9999999999988899999999999999 9999999998753
No 32
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=100.00 E-value=4.8e-65 Score=486.33 Aligned_cols=266 Identities=23% Similarity=0.291 Sum_probs=250.2
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCH
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 139 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st 139 (359)
+|++++++|||+ ||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.++| ||+|+|++||
T Consensus 1 ~Gv~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t 76 (286)
T 2r91_A 1 MEIVAPVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNA 76 (286)
T ss_dssp CEEEEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSH
T ss_pred CCeEEeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCH
Confidence 589999999999 999999999999999999999999999999999999999999999999999887 9999999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCCC-CCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 140 REAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~y~~-~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK 216 (359)
+++++++++|+++|||++|++||||++ ++++++++||++|+++ +||++||+|++||++++++++.+ +|||+|||
T Consensus 77 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~---~pnivgiK 153 (286)
T 2r91_A 77 DEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE---LGCIRGVK 153 (286)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH---HSCEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh---cCCEEEEE
Confidence 999999999999999999999999999 9999999999999997 79999999999999999999999 89999999
Q ss_pred ccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018253 217 ECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 286 (359)
Q Consensus 217 ~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l~ 286 (359)
++++|. + +.+ .+++|.+|+|.|+++++. +..|++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 154 ds~gd~~~~~~~~~-~~~~f~v~~G~d~~~~~~-l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 231 (286)
T 2r91_A 154 DTNESLAHTLAYKR-YLPQARVYNGSDSLVFAS-FAVRLDGVVASSANYLPELLAGIRDAVAAGDIERARSLQFLLDEIV 231 (286)
T ss_dssp ECCSCHHHHHHHHH-HCTTSEEEECCGGGHHHH-HHTTCSEECCGGGTTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHh-cCCCEEEEEccHHHHHHH-HHcCCCEEEecHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3 444 577899999999988864 8999999999999999999999986 575 678999999999
Q ss_pred HHHhcCCCh-HHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHc
Q 018253 287 EWLFQEPNP-IPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQI 334 (359)
Q Consensus 287 ~~l~~~~~~-~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~l 334 (359)
+.++..+++ ..+|++|+++|++.+.+|+|+.+++++++++|+++++++
T Consensus 232 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~ 280 (286)
T 2r91_A 232 ESARHIGYAAAVYELVEIFQGYEAGEPRGPVYPLDPEEKAWLRAAVAKA 280 (286)
T ss_dssp HHHHHHCHHHHHHHHHHHHHCSCCCBCCTTSCCCCHHHHHHHHHHTHHH
T ss_pred HHHhccCChHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHH
Confidence 988777678 899999999999888999999999999999999999876
No 33
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=100.00 E-value=1.1e-64 Score=490.15 Aligned_cols=276 Identities=22% Similarity=0.268 Sum_probs=253.4
Q ss_pred cCCceEEeeecCCCC-CCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018253 58 KALRLITAIKTPYLP-DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 136 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~-dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~ 136 (359)
+++|++++++|||++ ||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.++||+|||+|+|+
T Consensus 11 ~~~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~ 90 (316)
T 3e96_A 11 ALETISGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY 90 (316)
T ss_dssp HTSSEEECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS
T ss_pred cCCceEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc
Confidence 489999999999999 9999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEE
Q 018253 137 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAG 214 (359)
Q Consensus 137 ~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivG 214 (359)
+|+++++++++|+++|||++|+++|||++++++++++||++|+++ +||++||+ |.+++++++.+|+++|||+|
T Consensus 91 -~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~----g~~l~~~~~~~La~~pnIvg 165 (316)
T 3e96_A 91 -ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK----DPEISDRVLVDLAPLQNLVG 165 (316)
T ss_dssp -SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC----CTTSCTHHHHHHTTCTTEEE
T ss_pred -CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC----CCCCCHHHHHHHHcCCCEEE
Confidence 999999999999999999999999999999999999999999997 79999996 78999999999999999999
Q ss_pred EeccCchh-hHh---hhhCC-ceE-EEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHH
Q 018253 215 VKECVGND-RVE---HYTGN-GIV-VWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKL 282 (359)
Q Consensus 215 iK~ss~d~-~l~---~~~~~-~~~-v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l 282 (359)
||++++|. ++. +..++ +|. +|+|.|+.++...+..|++|+||+++|++|+.++++|+ +|| ++++|+++
T Consensus 166 iKdssgd~~~~~~~~~~~~~~~f~~v~~G~d~~~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l 245 (316)
T 3e96_A 166 VKYAINDLPRFAKVVRSIPEEHQIAWICGTAEKWAPFFWHAGAKGFTSGLVNLLPQKAVEMLEALRNNDNDAVWRIWEDI 245 (316)
T ss_dssp EEECCCCHHHHHHHHTTSCGGGCCEEEETTCTTTHHHHHHHTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHhcCCCCceEEEeCChHHHHHHHHHCCCCEEEechhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 99999984 333 33344 798 99999887665557899999999999999999999996 575 67899999
Q ss_pred HHHHHHHh---cCCChHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCccc
Q 018253 283 FPLIEWLF---QEPNPIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIGREN 338 (359)
Q Consensus 283 ~~l~~~l~---~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~~ 338 (359)
.++.+... ..+++..+|++|+++|++.+.+|+|+.+++++++++|+++++++|+..
T Consensus 246 ~~l~~~~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~l~~ 304 (316)
T 3e96_A 246 VPFEDLRGKYNQGNNVVVIKEAMEMLRQNAGVTRAPVNELSNEDKQLVTELLSSWKLLQ 304 (316)
T ss_dssp HHHHHHHTTTTTTTTTHHHHHHHHHTTCCCBBCCTTCCCCCHHHHHHHHHHHHHTTC--
T ss_pred hHHHHHHHHhccCccHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Confidence 99876542 356889999999999998899999999999999999999999999764
No 34
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=100.00 E-value=1.2e-64 Score=489.21 Aligned_cols=276 Identities=19% Similarity=0.250 Sum_probs=250.7
Q ss_pred cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018253 58 KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 137 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~ 137 (359)
+++|+|++++|||++||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.+ ||+|||+|+|++
T Consensus 8 ~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~ 86 (313)
T 3dz1_A 8 EAAGTFAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAP 86 (313)
T ss_dssp TCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCS
T ss_pred CCCeEEEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCC
Confidence 3899999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc----CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCe
Q 018253 138 STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM----GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNL 212 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a----~PiiiYn~P~~tg~~ls~e~l~~La-~~pni 212 (359)
+|+++++++++|+++|||++|++|||| +++++++++||++|+++ +||++||+|++||++|+++++.+|+ ++|||
T Consensus 87 ~t~~ai~la~~A~~~Gadavlv~~P~~-~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnI 165 (313)
T 3dz1_A 87 GFAAMRRLARLSMDAGAAGVMIAPPPS-LRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSASC 165 (313)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCTT-CCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHHHCSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC-CCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHHhCCCE
Confidence 999999999999999999999999985 58999999999999985 6999999999999999999999999 59999
Q ss_pred EEEec-cCchh-h---HhhhhC----CceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHH
Q 018253 213 AGVKE-CVGND-R---VEHYTG----NGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPS 277 (359)
Q Consensus 213 vGiK~-ss~d~-~---l~~~~~----~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~ 277 (359)
+|||+ +++|. + +.+..+ ++|.||+|.|+++++..+..|++|+|++ |++|++++++|+ +|| |++
T Consensus 166 vgiKd~~~~~~~~~~~~~~~~~~~~~~~f~v~~G~d~~~l~~~l~~G~~G~i~~--~~~P~~~~~l~~a~~~Gd~~~A~~ 243 (313)
T 3dz1_A 166 VMLKHEDWPGLEKITTLRGFQKDGSLRPLSILCGNGGLFLDFEMERGADGAMTG--YCFPDMLVDVVKLSKAGQRDLAHN 243 (313)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHTSSCCCEEEECGGGTTHHHHHHHTCCEEEEC--CSCHHHHHHHHHHHHTTCHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHhcCccCCCCeEEEeCCcHHHHHHHHHCCCcEEEeC--cccHHHHHHHHHHHHCCCHHHHHH
Confidence 99998 46663 3 333333 7899999999887764489999999975 789999999996 475 678
Q ss_pred HHHHHHHHHHHHhcCC-ChHHHHHHHHHcCC-CCCCCCCCCCCCCHHHHHHHHHHHHHcCcc
Q 018253 278 LNTKLFPLIEWLFQEP-NPIPLNTALAQLGV-VRPVFRLPYVPLPQEKRAEFVNLVNQIGRE 337 (359)
Q Consensus 278 l~~~l~~l~~~l~~~~-~~~~~K~al~~~G~-~~g~~R~Pl~~l~~e~~~~i~~~l~~lgl~ 337 (359)
+|+++.++++.++..+ ++..+|++|+++|+ ..+.+|+|+.+++++++++|+++|+++++.
T Consensus 244 l~~~l~~l~~~~~~~~~~~~~~K~al~~~G~~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~~~ 305 (313)
T 3dz1_A 244 LFDAHLPLIRYEHQQGVGLSVRKYVLKKRGLLSSSAQRKPGASLTDTAREEVDYLLSRLARV 305 (313)
T ss_dssp HHHHHHHHHHHHCSTTHHHHHHHHHHHHTTSCSCCCCCSSCCCCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccc
Confidence 9999999999877654 68899999999998 478999999999999999999999999865
No 35
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=7.4e-65 Score=495.87 Aligned_cols=270 Identities=21% Similarity=0.268 Sum_probs=251.1
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
++|++++++|||++||+||+++++++++|+++.|++||+++|||||+++||.+||+++++. .+++|+|||+|+|+++
T Consensus 27 ~~Gv~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~---~~~grvpViaGvg~~s 103 (344)
T 2hmc_A 27 FSGVIPALMTPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER---LVKAGIPVIVGTGAVN 103 (344)
T ss_dssp TSEEEEBCCCCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH---HHHTTCCEEEECCCSS
T ss_pred cCceEEeeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH---HhCCCCcEEEecCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999998 5678999999999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCC-CCHHHHHHHHHHHHh-c--CCeEEEeCCCCCCCCCCHHHHHHH-hcCCCeE
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLS-M--GPTIIYNVPSRTGQDIPPRVIHTM-AQSPNLA 213 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~-~s~~~l~~yf~~Ia~-a--~PiiiYn~P~~tg~~ls~e~l~~L-a~~pniv 213 (359)
|+++++++++|+++|||++|++||||++ ++++++++||++|++ + +||++||+| +||++|+++++.+| +++|||+
T Consensus 104 t~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P-~tg~~l~~e~~~~L~a~~pnIv 182 (344)
T 2hmc_A 104 TASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP-YYGFATRADLFFALRAEHKNLV 182 (344)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG-GGTBCCCHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC-ccCCCcCHHHHHHHHhcCCCEE
Confidence 9999999999999999999999999999 999999999999999 6 799999999 99999999999999 8999999
Q ss_pred EEeccCc--hh-hHhh---hhCCceEEEecCCchhhhhhh-hcCCceeecccccccHHHHHHHHHc------CC--cHHH
Q 018253 214 GVKECVG--ND-RVEH---YTGNGIVVWSGNDDQCHDARW-NHGATGVISVTSNLVPGMMRELMFG------GK--NPSL 278 (359)
Q Consensus 214 GiK~ss~--d~-~l~~---~~~~~~~v~~G~d~~~~~~~l-~~Ga~G~is~~an~~P~l~~~l~~a------g~--a~~l 278 (359)
|||++++ |. ++.+ ..+++|.||+|.|+++++. + ..|++|+||+++|++|+.++++|++ || ++++
T Consensus 183 GiKdssgp~d~~~~~~~~~~~~~~f~v~~G~D~~~l~~-l~~~Ga~G~is~~anv~P~~~~~l~~a~~~~~~Gd~~A~~l 261 (344)
T 2hmc_A 183 GFKEFGGPADMRYAAENITSRDDEVTLMIGVDTAVVHG-FVNCGATGAITGIGNVLPKEVIHLCKLSQAAAKGDADARAR 261 (344)
T ss_dssp EEEECSCHHHHHHHHHHTSCSSSSCEEEECSGGGHHHH-HHHSCCCEEEESGGGTSHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred EEEcCCCCCCHHHHHHHHHHcCCCEEEEECcHHHHHHH-HHHcCCCEEEeCHHHhhHHHHHHHHHhHHHHhcCcHHHHHH
Confidence 9999999 83 4433 3457899999999998865 8 8999999999999999999998865 55 4578
Q ss_pred HHHHH----HHHHHHhcCCChHHHHHHHHHcCCCCCCCCCCC---CCCCHHHHHHHHHHHHHcC
Q 018253 279 NTKLF----PLIEWLFQEPNPIPLNTALAQLGVVRPVFRLPY---VPLPQEKRAEFVNLVNQIG 335 (359)
Q Consensus 279 ~~~l~----~l~~~l~~~~~~~~~K~al~~~G~~~g~~R~Pl---~~l~~e~~~~i~~~l~~lg 335 (359)
|+++. +++++++..+++..+|++|+++|+ +.+|+|+ .+++++++++|++++++++
T Consensus 262 ~~~l~~~~~~l~~~~~~~~~~~~~K~al~~~G~--g~~R~Pl~~~~~l~~~~~~~l~~~l~~~~ 323 (344)
T 2hmc_A 262 ALELEQALAVLSSFDEGPDLVLYFKYMMVLKGD--KEYTLHFNETDALTDSQRGYVEAQFKLFN 323 (344)
T ss_dssp HHHHHHHTHHHHHGGGSTTHHHHHHHHHHHTTC--GGGSCCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHhcCCcHHHHHHHHHHCCC--CCCCCCCCCCCCcCHHHHHHHHHHHHHHh
Confidence 99999 999887777778899999999999 8899999 9999999999999998865
No 36
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=100.00 E-value=2e-64 Score=482.47 Aligned_cols=266 Identities=20% Similarity=0.294 Sum_probs=250.5
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCH
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 139 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st 139 (359)
+|++++++|||++||+||+++++++++|++++|++||+++|||||+++||.+||+++++.+++.++| ||+|+|++||
T Consensus 1 ~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g---ViaGvg~~~t 77 (288)
T 2nuw_A 1 MEIISPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK---LIFQVGSLNL 77 (288)
T ss_dssp CEEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC---EEEECCCSCH
T ss_pred CCeEEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---eEEeeCCCCH
Confidence 5999999999999999999999999999999999999999999999999999999999999998887 9999999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCCC-CCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 140 REAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~y~~-~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK 216 (359)
+++++++++|+++|||++|++||||++ ++++++++||++|+++ +||++||+|++||++++++++.+| ||+|||
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L----nIvgiK 153 (288)
T 2nuw_A 78 NDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL----PVKGIK 153 (288)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT----TEEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc----EEEEEE
Confidence 999999999999999999999999999 9999999999999997 799999999999999999999999 999999
Q ss_pred ccCchh-h---HhhhhCCceEEEecCCchhhhhhhhcCCceeecccccccHHHHHHHHH---cCC---cHHHHHHHHHHH
Q 018253 217 ECVGND-R---VEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMF---GGK---NPSLNTKLFPLI 286 (359)
Q Consensus 217 ~ss~d~-~---l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~---ag~---a~~l~~~l~~l~ 286 (359)
++++|. + +.+ .+++|.+|+|.|+++++. +.. ++|+||+++|++|+.++++|+ +|| ++++|+++.+++
T Consensus 154 dssgd~~~~~~~~~-~~~~f~v~~G~d~~~~~~-l~~-~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~ 230 (288)
T 2nuw_A 154 DTNQDLAHSLEYKL-NLPGVKVYNGSNTLIYYS-LLS-LDGVVASFTNFIPEVIVKQRDLIKQGKLDDALRLQELINRLA 230 (288)
T ss_dssp ECCSCHHHHHHHHH-HSTTCEEEECCGGGHHHH-HTT-SSEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHh-cCCCeEEEECcHHHHHHH-HHH-hCEEEecHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 999983 3 444 578899999999998875 778 999999999999999999986 575 678999999999
Q ss_pred HHHhcCCC-hHHHHHHHHHcCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q 018253 287 EWLFQEPN-PIPLNTALAQLGVVRPVFRLPYVPLPQEKRAEFVNLVNQIG 335 (359)
Q Consensus 287 ~~l~~~~~-~~~~K~al~~~G~~~g~~R~Pl~~l~~e~~~~i~~~l~~lg 335 (359)
+.++..++ +..+|++|+++|++.+.+|+|+.++++++++++++++++++
T Consensus 231 ~~~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~~l~~~~~~~l~~~l~~~~ 280 (288)
T 2nuw_A 231 DILRKYGSISAIYVLVNEFQGYDVGYPRPPIFPLTDEEALSLKREIEPLK 280 (288)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSSCCCBCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCChHHHHHHHHHHcCCCCCCcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 98888777 88999999999998889999999999999999999999875
No 37
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=97.90 E-value=0.00098 Score=63.16 Aligned_cols=218 Identities=19% Similarity=0.200 Sum_probs=153.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC--CcEEEEecCCC--------CHHHHH
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA--SVKVIGNTGSN--------STREAI 143 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g--rvpViagvg~~--------st~~ai 143 (359)
..||+++.-+.=++|-+.|..--=..-|.--+.-|.+..-++|++....+++. .-.|.+|+|.. +.++.+
T Consensus 57 aaiDWdaTLafR~~Lws~GLGVAEAMDTAQRGMGLDW~~a~ELIrRs~aeA~~~pg~~ia~G~GTDqL~~~~~~~l~~V~ 136 (396)
T 4dnh_A 57 PAIDWERTLAFRHRLWDLGLGVAESMDTAQRGMGLGWPEARELIRRSLAEARGRPDALIACGAGTDHLAPGPDVSIDDIL 136 (396)
T ss_dssp CCBCHHHHHHHHHHHHHTTCEEEETCGGGTBTTTBCHHHHHHHHHHHHHHHHTSSSCCEEEEECCTTSCCCTTCCHHHHH
T ss_pred ccCChHHHHHHHHHHHHccccHHHHHHHhhccCCCCcHHHHHHHHHHHHHHhcCCCCeeeeccCcCCCCCCCCCCHHHHH
Confidence 57999999999999999997555556788889999999999999998776532 24577787732 444443
Q ss_pred ----HHHHHHHhCCCCEEEEcCCCC--CCCCHHHHHHHHHHHHhc--CCeEEEeC-----CCCCCCC----CC--HHHHH
Q 018253 144 ----HATEQGFAVGMHAALHINPYY--GKTSLEGLISHFDSVLSM--GPTIIYNV-----PSRTGQD----IP--PRVIH 204 (359)
Q Consensus 144 ----~la~~a~~~Gadav~v~pP~y--~~~s~~~l~~yf~~Ia~a--~PiiiYn~-----P~~tg~~----ls--~e~l~ 204 (359)
|+....++.|+..|+...-.. ..-++++..+-|..|.+. .|||++=. |...|+. +. .+++.
T Consensus 137 ~AY~EQ~~~Ve~~G~~~ILMASRaLA~~A~~pdDY~~VY~~vL~q~~~PVILHWLG~mFDPaL~GYWGs~d~~~A~~t~l 216 (396)
T 4dnh_A 137 AAYESQIEAIEAEGGRIILMASRALAAAAKGPEDYIRVYDRVLSQVKEPVIIHWLGEMFDPALEGYWGNADHMAAMKTCL 216 (396)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCHHHHHHCCSHHHHHHHHHHHHHHCSSCEEEEEECTTTCGGGTTTTSCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEehhHHHHHHhCCHHHHHHHHHHHHHhcCCCEEEEecccccChhhccccCCCCHHHHHHHHH
Confidence 566777889998766543332 235788888999998875 69998743 6666663 22 35666
Q ss_pred HHh-cC-CCeEEEeccCchh----hHhhhhCCceEEEecCCchhhhhhhhcC-----CceeecccccccHHHHHHHH--H
Q 018253 205 TMA-QS-PNLAGVKECVGND----RVEHYTGNGIVVWSGNDDQCHDARWNHG-----ATGVISVTSNLVPGMMRELM--F 271 (359)
Q Consensus 205 ~La-~~-pnivGiK~ss~d~----~l~~~~~~~~~v~~G~d~~~~~~~l~~G-----a~G~is~~an~~P~l~~~l~--~ 271 (359)
.|. ++ ..|-|||.|--|. .+++...+++++|+|+|- -++. |..| .+...+...-+.|.....+- +
T Consensus 217 ~lI~~~~~kVDGIKiSLLDa~~Ei~lRrrLP~gVrmYTGDDF-nYpE-LI~GD~~g~ShALLGIFdaIaPaAs~Al~aLd 294 (396)
T 4dnh_A 217 DVLEAHAAKVDGIKISLLSKEKEIVMRRQLPKGVRMYTGDDF-NYAE-LIAGDEEGHSDALLGIFDAIAPVASAALEALG 294 (396)
T ss_dssp HHHHHTGGGEEEEEEESCCHHHHHHHHTSCCTTCEEEECCTT-THHH-HHHCCSSCCCEEEESHHHHTHHHHHHHHHHHH
T ss_pred HHHHhChhhcCceEEeeeccHhHHHHHHhCCCcceeecCCCC-CcHH-HhcCCCCCccHHHHhhhhhccHHHHHHHHHHh
Confidence 665 56 5799999998883 355666789999999864 4455 6666 34444555556677666654 5
Q ss_pred cCCcH---HHHHHHHHHHHHHhcCC
Q 018253 272 GGKNP---SLNTKLFPLIEWLFQEP 293 (359)
Q Consensus 272 ag~a~---~l~~~l~~l~~~l~~~~ 293 (359)
+|+.. ++.+--.||-+.+|..|
T Consensus 295 ~Gd~~~f~~iL~PTvpLsRhiF~aP 319 (396)
T 4dnh_A 295 SGRNGEFFELLEPTVPLSRHIFKAP 319 (396)
T ss_dssp TTCHHHHHHHHTTHHHHHHHHTCSS
T ss_pred CCCHHHHHHHhcCcchhhhhhhcCC
Confidence 78754 44455567777788765
No 38
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.43 E-value=0.0064 Score=57.74 Aligned_cols=131 Identities=15% Similarity=0.165 Sum_probs=90.4
Q ss_pred eEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCc--------cCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe
Q 018253 62 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTT--------GEGQLMSWDEHIMLIGHTVNCFGASVKVIGN 133 (359)
Q Consensus 62 i~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~Gst--------GE~~~LT~~Er~~li~~~v~~~~grvpViag 133 (359)
|++-+.|-| | +.+...+.++.+++.|+.|+-+=+.+ +.-...+.+|..+-++.+++. +....|++=
T Consensus 92 viaD~d~Gy---g--~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~AR 165 (305)
T 3ih1_A 92 VLVDIDTGF---G--GVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVAR 165 (305)
T ss_dssp EEEECTTCS---S--SHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEE
T ss_pred EEEECCCCC---C--CHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEe
Confidence 455555544 2 35667889999999999999876554 556788999999999999987 556667766
Q ss_pred cCC---CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCC--CCCCCCCHHHHHHH
Q 018253 134 TGS---NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPS--RTGQDIPPRVIHTM 206 (359)
Q Consensus 134 vg~---~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~--~tg~~ls~e~l~~L 206 (359)
+-+ ...+++|+.++.++++|||++++-.+ ++.+++.++-+++ ..|++ -|.-. .| -.++.+.+.+|
T Consensus 166 tda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~----~~~~~~~~i~~~~--~~P~~-~n~~~~g~t-p~~~~~eL~~l 235 (305)
T 3ih1_A 166 TDARGVEGLDEAIERANAYVKAGADAIFPEAL----QSEEEFRLFNSKV--NAPLL-ANMTEFGKT-PYYSAEEFANM 235 (305)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC----CSHHHHHHHHHHS--CSCBE-EECCTTSSS-CCCCHHHHHHT
T ss_pred eccccccCHHHHHHHHHHHHHcCCCEEEEcCC----CCHHHHHHHHHHc--CCCEE-EeecCCCCC-CCCCHHHHHHc
Confidence 654 24889999999999999999999654 4555544443333 25884 34311 11 13565555554
No 39
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=97.43 E-value=0.0001 Score=68.50 Aligned_cols=180 Identities=16% Similarity=0.204 Sum_probs=108.4
Q ss_pred eEEeeecCCCC---CCCC-CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018253 62 LITAIKTPYLP---DGRF-DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN 137 (359)
Q Consensus 62 i~~al~TPF~~---dg~I-D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~ 137 (359)
....+.++++. .+.+ +.+.+.++++.+.+.|++++++.. .+++.+.+...+++|+++++.+.
T Consensus 24 ~~~~~~~~id~~~~l~p~~~~~~~~~~~~~~~~~g~~~i~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~ 89 (273)
T 2qjg_A 24 SEKTVIVPMDHGVSNGPIKGLIDIRKTVNDVAEGGANAVLLHK--------------GIVRHGHRGYGKDVGLIIHLSGG 89 (273)
T ss_dssp TCCEEEEECCHHHHHCSCTTSSSHHHHHHHHHHHTCSEEEECH--------------HHHHSCCCSSSCCCEEEEECEEC
T ss_pred CCCEEEEEcccccccCCCcchhhHHHHHHHHHhcCCCEEEeCH--------------HHHHHHHHhhcCCCCEEEEEcCC
Confidence 34555666654 3333 556667899999999999998632 12332223345689999988654
Q ss_pred C-------HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-----CCeEEEeCCCCCCCC----CCHH
Q 018253 138 S-------TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-----GPTIIYNVPSRTGQD----IPPR 201 (359)
Q Consensus 138 s-------t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-----~PiiiYn~P~~tg~~----ls~e 201 (359)
+ ++...+.++.|.+.|||.+.+. .++...+.+++++..+++.+. .|+++...+ .|.. ++++
T Consensus 90 ~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~-l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~--~G~~l~~~~~~~ 166 (273)
T 2qjg_A 90 TAISPNPLKKVIVTTVEEAIRMGADAVSIH-VNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYP--RGKHIQNERDPE 166 (273)
T ss_dssp CTTSSSTTCCEECSCHHHHHHTTCSEEEEE-EEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEE--CSTTCSCTTCHH
T ss_pred CcCCCCcccchHHHHHHHHHHcCCCEEEEE-EecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCC--CCcccCCCCCHh
Confidence 4 1223677888899999999432 123345677777777777653 698887644 2443 5666
Q ss_pred HHHHH---h-c-CCCeEEEeccCch-hhH---hhhhCCceEEEecCCchh-------hhhhhhcCCceeecccc
Q 018253 202 VIHTM---A-Q-SPNLAGVKECVGN-DRV---EHYTGNGIVVWSGNDDQC-------HDARWNHGATGVISVTS 259 (359)
Q Consensus 202 ~l~~L---a-~-~pnivGiK~ss~d-~~l---~~~~~~~~~v~~G~d~~~-------~~~~l~~Ga~G~is~~a 259 (359)
.+.++ + + -..++++..+ .+ ..+ .+..+-.+....|-...- +...+..|++|+..+.+
T Consensus 167 ~~~~~a~~a~~~Gad~i~~~~~-~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 167 LVAHAARLGAELGADIVKTSYT-GDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp HHHHHHHHHHHTTCSEEEECCC-SSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred HHHHHHHHHHHcCCCEEEECCC-CCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 65544 3 2 2567777653 33 223 323333455555654211 33345789999987643
No 40
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=97.34 E-value=0.013 Score=55.55 Aligned_cols=123 Identities=11% Similarity=0.079 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcc--------CcCCCCHHHHHHHHHHHHHhhC-CCcEEEEecCCC---CHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTG--------EGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGSN---STREAIH 144 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstG--------E~~~LT~~Er~~li~~~v~~~~-grvpViagvg~~---st~~ai~ 144 (359)
+.+...+.+..+++.|+.|+-+=+.++ .-...+.+|..+-++.+++... ...-|++=+-+. ..+++|+
T Consensus 96 ~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~ 175 (298)
T 3eoo_A 96 GAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIE 175 (298)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHH
Confidence 677888899999999999999877664 3346788999999988888754 345556545432 5788999
Q ss_pred HHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCC-CCCCCCHHHHHHH
Q 018253 145 ATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSR-TGQDIPPRVIHTM 206 (359)
Q Consensus 145 la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~-tg~~ls~e~l~~L 206 (359)
+++.+.++|||.+++-.+ .+.+++.++-+++. .|+++ |.-.. ..-.++.+.+.+|
T Consensus 176 Ra~ay~~AGAD~if~~~~----~~~ee~~~~~~~~~--~Pl~~-n~~~~g~tp~~~~~eL~~l 231 (298)
T 3eoo_A 176 RAIAYVEAGADMIFPEAM----KTLDDYRRFKEAVK--VPILA-NLTEFGSTPLFTLDELKGA 231 (298)
T ss_dssp HHHHHHHTTCSEEEECCC----CSHHHHHHHHHHHC--SCBEE-ECCTTSSSCCCCHHHHHHT
T ss_pred HHHhhHhcCCCEEEeCCC----CCHHHHHHHHHHcC--CCeEE-EeccCCCCCCCCHHHHHHc
Confidence 999999999999998654 47888877777663 78755 42111 0113565555555
No 41
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=97.34 E-value=0.014 Score=55.40 Aligned_cols=124 Identities=15% Similarity=0.117 Sum_probs=89.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccC--------cCCCCHHHHHHHHHHHHHhh---CCCcEEEEecCC---CCHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGE--------GQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS---NSTREA 142 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE--------~~~LT~~Er~~li~~~v~~~---~grvpViagvg~---~st~~a 142 (359)
+.+...+.++.+++.|+.|+-+=+.++. -...+.+|..+-++.+++.. +...-|++=+-+ ...+++
T Consensus 93 ~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeA 172 (302)
T 3fa4_A 93 GPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEES 172 (302)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHH
Confidence 4667889999999999999999887753 35678899888888887764 445556665543 357999
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeC-CCCCCCCCCHHHHHHH
Q 018253 143 IHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNV-PSRTGQDIPPRVIHTM 206 (359)
Q Consensus 143 i~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~-P~~tg~~ls~e~l~~L 206 (359)
|++++.+.++|||++++..+ .+.+++.++.+.+. ..|+++ |. +.-..-.++.+.+++|
T Consensus 173 i~Ra~ay~eAGAD~ifi~g~----~~~~ei~~~~~~~~-~~Pl~~-n~~~~g~~p~~~~~eL~~l 231 (302)
T 3fa4_A 173 VARLRAARDAGADVGFLEGI----TSREMARQVIQDLA-GWPLLL-NMVEHGATPSISAAEAKEM 231 (302)
T ss_dssp HHHHHHHHTTTCSEEEETTC----CCHHHHHHHHHHTT-TSCEEE-ECCTTSSSCCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEeecCC----CCHHHHHHHHHHhc-CCceeE-EEecCCCCCCCCHHHHHHc
Confidence 99999999999999988653 47777766665553 258754 43 3211124777777777
No 42
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=97.31 E-value=0.016 Score=55.05 Aligned_cols=124 Identities=17% Similarity=0.097 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccC--------cCCCCHHHHHHHHHHHHHhh---CCCcEEEEecCC---CCHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGE--------GQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS---NSTREA 142 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE--------~~~LT~~Er~~li~~~v~~~---~grvpViagvg~---~st~~a 142 (359)
+.+...+.++.+++.|+.|+-+=+.++. -...+.+|..+-++.+++.. +...-|++=+-+ ...+++
T Consensus 101 ~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeA 180 (307)
T 3lye_A 101 GPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEEC 180 (307)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHH
Confidence 4667788999999999999999887642 34678888777777777654 345556665543 357799
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeC-CCCCCCCCCHHHHHHH
Q 018253 143 IHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNV-PSRTGQDIPPRVIHTM 206 (359)
Q Consensus 143 i~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~-P~~tg~~ls~e~l~~L 206 (359)
|++++.+.++|||.+++-.+ .+.+++.++-+.+. ..|++ .|. +.-..-.++.+.+++|
T Consensus 181 i~Ra~ay~eAGAD~ifi~~~----~~~~~~~~i~~~~~-~~Pv~-~n~~~~g~~p~~t~~eL~~l 239 (307)
T 3lye_A 181 IERLRAARDEGADVGLLEGF----RSKEQAAAAVAALA-PWPLL-LNSVENGHSPLITVEEAKAM 239 (307)
T ss_dssp HHHHHHHHHTTCSEEEECCC----SCHHHHHHHHHHHT-TSCBE-EEEETTSSSCCCCHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEecCC----CCHHHHHHHHHHcc-CCcee-EEeecCCCCCCCCHHHHHHc
Confidence 99999999999999988533 57788777777664 35874 343 3211124777777776
No 43
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=97.25 E-value=0.0095 Score=58.96 Aligned_cols=125 Identities=18% Similarity=0.133 Sum_probs=90.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc---------cCcCCCCHHHHHHHHHHHHHhh---CCCcEEEEecCC--------
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTT---------GEGQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS-------- 136 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~Gst---------GE~~~LT~~Er~~li~~~v~~~---~grvpViagvg~-------- 136 (359)
+.....++++.++++|+.|+-+=-.+ |--...+.+|..+-++.+++.. +...-|++=+-+
T Consensus 161 ~~~nv~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s 240 (429)
T 1f8m_A 161 GALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITS 240 (429)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESC
T ss_pred CcHHHHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccc
Confidence 44568999999999999999874443 3445788999888888888765 334445554443
Q ss_pred -----------------------CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCC--eEEEeC-
Q 018253 137 -----------------------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGP--TIIYNV- 190 (359)
Q Consensus 137 -----------------------~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~P--iiiYn~- 190 (359)
..++++|++++.+.+ |||.+.+-++. ++.+++.++-+.|....| ++.||.
T Consensus 241 ~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~~~---~~~eei~~f~~~v~~~~P~~~La~n~s 316 (429)
T 1f8m_A 241 DVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETGT---PDLEAARQFSEAVKAEYPDQMLAYNCS 316 (429)
T ss_dssp CCSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECCSS---CCHHHHHHHHHHHHTTCTTCEEEEECC
T ss_pred cccccccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCCCC---CCHHHHHHHHHHhcccCCCceeecCCC
Confidence 468999999999988 99999875332 688999999999875556 678986
Q ss_pred CCCC-CCCCCHHHHHH
Q 018253 191 PSRT-GQDIPPRVIHT 205 (359)
Q Consensus 191 P~~t-g~~ls~e~l~~ 205 (359)
|..+ ...++++.+++
T Consensus 317 Psf~w~~~~~~~~~~~ 332 (429)
T 1f8m_A 317 PSFNWKKHLDDATIAK 332 (429)
T ss_dssp TTSCHHHHCCHHHHHH
T ss_pred CCCCcccccchhhHhH
Confidence 5432 11255555544
No 44
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=97.21 E-value=0.014 Score=57.70 Aligned_cols=124 Identities=17% Similarity=0.148 Sum_probs=90.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccC---------ccCcCCCCHHHHHHHHHHHHHhh---CCCcEEEEecCC--------
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGT---------TGEGQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS-------- 136 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~Gs---------tGE~~~LT~~Er~~li~~~v~~~---~grvpViagvg~-------- 136 (359)
+.....++++.+++.|+.|+-+=-. .+.-...+.+|..+-++.+++.. +...-|++=+-+
T Consensus 165 ~~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s 244 (439)
T 3i4e_A 165 GVLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITS 244 (439)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESC
T ss_pred ccHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCccccccccc
Confidence 4457889999999999999987443 34556788999888887777654 444555654543
Q ss_pred -----------------------CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-
Q 018253 137 -----------------------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV- 190 (359)
Q Consensus 137 -----------------------~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~- 190 (359)
..++++|++++.+.+ |||.+++-++ .++.+++.++-+.|... .+++.||.
T Consensus 245 ~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~---~~~~eei~~f~~~v~~~~P~~~l~~~~s 320 (439)
T 3i4e_A 245 DIDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETG---KPDLEYAKKFAEAIHKQFPGKLLSYNCS 320 (439)
T ss_dssp CCCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCS---SCCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred ccccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCC---CCCHHHHHHHHHHhcccCCceEEeeCCC
Confidence 469999999999998 9999998654 36889999999998764 46788985
Q ss_pred CCCC-CCCCCHHHHH
Q 018253 191 PSRT-GQDIPPRVIH 204 (359)
Q Consensus 191 P~~t-g~~ls~e~l~ 204 (359)
|..+ ...++++.++
T Consensus 321 Psfnw~~~~~~~~~~ 335 (439)
T 3i4e_A 321 PSFNWKKNLDDATIA 335 (439)
T ss_dssp SSSCHHHHSCHHHHH
T ss_pred CCCcCcccCCHHHHH
Confidence 5432 1125555433
No 45
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=97.19 E-value=0.018 Score=54.40 Aligned_cols=134 Identities=16% Similarity=0.213 Sum_probs=91.9
Q ss_pred eEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCc--------c--CcCCCCHHHHHHHHHHHHHhhC-CCcEE
Q 018253 62 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTT--------G--EGQLMSWDEHIMLIGHTVNCFG-ASVKV 130 (359)
Q Consensus 62 i~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~Gst--------G--E~~~LT~~Er~~li~~~v~~~~-grvpV 130 (359)
|++-+.|=| | +.+...+.+..+++.|+.|+-+=+.+ | .-...+.+|..+-++.+++... +...|
T Consensus 82 viaD~d~Gy---g--~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i 156 (295)
T 1s2w_A 82 ILLDADTGY---G--NFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCI 156 (295)
T ss_dssp EEEECCSSC---S--SHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEE
T ss_pred EEecCCCCC---C--CHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEE
Confidence 555554444 2 35677888999999999999987765 3 2456778888888988888753 45556
Q ss_pred EEecCCC----CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 131 IGNTGSN----STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 131 iagvg~~----st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
++=+-+. ..+++|+.++.++++|||++++-++ .++.+++.++-+++....|++ +| |...| ..+.+.+.+|
T Consensus 157 ~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~---~~~~~~~~~i~~~~~~~~P~i-~~-~~~~~-~~~~~eL~~l 230 (295)
T 1s2w_A 157 VARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSK---KADPSDIEAFMKAWNNQGPVV-IV-PTKYY-KTPTDHFRDM 230 (295)
T ss_dssp EEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCC---SSSSHHHHHHHHHHTTCSCEE-EC-CSTTT-TSCHHHHHHH
T ss_pred EEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCC---CCCHHHHHHHHHHcCCCCCEE-Ee-CCCCC-CCCHHHHHHc
Confidence 6644332 3799999999999999999988631 245677777777775447985 55 43223 3454444444
No 46
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=97.09 E-value=0.019 Score=54.77 Aligned_cols=123 Identities=16% Similarity=0.208 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc--------cCcCCCCHHHHHHHHHHHHHhhC-CCcEEEEecCCC---CHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTT--------GEGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGSN---STREAIH 144 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~Gst--------GE~~~LT~~Er~~li~~~v~~~~-grvpViagvg~~---st~~ai~ 144 (359)
+.+...+.+..+++.|+.|+-+=+.. |--...+.+|..+-++.+++... +...|++=+-+. ..+++|+
T Consensus 114 ~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~ 193 (318)
T 1zlp_A 114 GPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIR 193 (318)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHH
Confidence 77888899999999999999986655 33346788888888888888763 455566544432 2379999
Q ss_pred HHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCC-CCCCCCHHHHHHH
Q 018253 145 ATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSR-TGQDIPPRVIHTM 206 (359)
Q Consensus 145 la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~-tg~~ls~e~l~~L 206 (359)
.++.++++|||++++-.+ ++.+++.++-+++. .|++. |.-.. ..-.++.+.+.+|
T Consensus 194 Ra~Ay~eAGAd~i~~e~~----~~~e~~~~i~~~l~--~P~la-n~~~~g~~~~~~~~eL~~l 249 (318)
T 1zlp_A 194 RANLYKEAGADATFVEAP----ANVDELKEVSAKTK--GLRIA-NMIEGGKTPLHTPEEFKEM 249 (318)
T ss_dssp HHHHHHHTTCSEEEECCC----CSHHHHHHHHHHSC--SEEEE-EECTTSSSCCCCHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCC----CCHHHHHHHHHhcC--CCEEE-EeccCCCCCCCCHHHHHHc
Confidence 999999999999998643 56666655554442 68766 53211 1134676666665
No 47
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=96.99 E-value=0.013 Score=55.35 Aligned_cols=131 Identities=14% Similarity=0.097 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcc----------CcCCCCHHHHHHHHHHHHHhhC-CCcEEEEecCCC----CHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTG----------EGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGSN----STRE 141 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstG----------E~~~LT~~Er~~li~~~v~~~~-grvpViagvg~~----st~~ 141 (359)
+.+...+.+..+++.|+.|+-+=+.++ .-...+.+|..+-++.+++... +...|++=+-+. ..++
T Consensus 88 ~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ 167 (290)
T 2hjp_A 88 NAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQE 167 (290)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHH
Confidence 677888999999999999999877652 3446677788888888888642 456666644332 3799
Q ss_pred HHHHHHHHHhCCCCEEEEcC-CCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEec
Q 018253 142 AIHATEQGFAVGMHAALHIN-PYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKE 217 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~p-P~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK~ 217 (359)
+|+.++.++++|||++++-. + ++.+++.++-+++....|++. |.- .+..++. .+|.+..++.-+-+
T Consensus 168 ai~Ra~ay~eAGAd~i~~e~~~----~~~~~~~~i~~~~~~~vP~i~-n~~--~~~~~~~---~eL~~lG~v~~v~~ 234 (290)
T 2hjp_A 168 AVRRGQAYEEAGADAILIHSRQ----KTPDEILAFVKSWPGKVPLVL-VPT--AYPQLTE---ADIAALSKVGIVIY 234 (290)
T ss_dssp HHHHHHHHHHTTCSEEEECCCC----SSSHHHHHHHHHCCCSSCEEE-CGG--GCTTSCH---HHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHcCCcEEEeCCCC----CCHHHHHHHHHHcCCCCCEEE-ecc--CCCCCCH---HHHHhcCCeeEEEe
Confidence 99999999999999999854 3 455777666665543379876 532 1233554 45555443333333
No 48
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=96.93 E-value=0.026 Score=55.79 Aligned_cols=124 Identities=19% Similarity=0.152 Sum_probs=91.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc---------cCcCCCCHHHHHHHHHHHHHhh---CCCcEEEEecCC--------
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTT---------GEGQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS-------- 136 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~Gst---------GE~~~LT~~Er~~li~~~v~~~---~grvpViagvg~-------- 136 (359)
+.....+.++.+++.|+.|+.+=-.+ +.-...+.+|..+-++.+++.. +...-|++=+-+
T Consensus 165 ~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s 244 (435)
T 3lg3_A 165 GVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAADLLTS 244 (435)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESC
T ss_pred CcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCcccccccc
Confidence 44467899999999999999985444 3455678898888777777654 445556665543
Q ss_pred -----------------------CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-
Q 018253 137 -----------------------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV- 190 (359)
Q Consensus 137 -----------------------~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~- 190 (359)
..++++|++++.+.+ |||.+.+-++ .++.+++.++-+.|... ..++.||.
T Consensus 245 ~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~---~~~~~ei~~f~~~v~~~~P~~~La~~~s 320 (435)
T 3lg3_A 245 DCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETS---TPDLALAKRFADAVHAQFPGKLLAYNCS 320 (435)
T ss_dssp CCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCS---SCCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred ccccccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCC---CCCHHHHHHHHHHhccccCCeEEEeCCC
Confidence 569999999999998 9999998654 36889999999998764 45788986
Q ss_pred CCCC-CCCCCHHHHH
Q 018253 191 PSRT-GQDIPPRVIH 204 (359)
Q Consensus 191 P~~t-g~~ls~e~l~ 204 (359)
|+.+ ...++++.++
T Consensus 321 Psfnw~~~~~d~~~~ 335 (435)
T 3lg3_A 321 PSFNWKKNLTDQQIA 335 (435)
T ss_dssp SSSCHHHHSCHHHHH
T ss_pred CCccccccCCHHHHH
Confidence 5432 1136665553
No 49
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=96.88 E-value=0.016 Score=54.20 Aligned_cols=121 Identities=13% Similarity=0.079 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCc--cCcCCCCHHHHHHHHHHHHHhhC---CCcEEEEecCC----------CCHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTT--GEGQLMSWDEHIMLIGHTVNCFG---ASVKVIGNTGS----------NSTR 140 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~Gst--GE~~~LT~~Er~~li~~~v~~~~---grvpViagvg~----------~st~ 140 (359)
-+.+...+.+..+++.|+.|+-+=+.+ +.-...+.+|..+-++.+++... ....|++=+-+ ...+
T Consensus 89 ~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~ 168 (275)
T 2ze3_A 89 HAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLA 168 (275)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHH
Confidence 356778899999999999999998876 34567789999999999888743 23344443433 1479
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 141 EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 141 ~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
++|+.++.++++|||++++-.+ ++.+++.++-+++. .|+. ++. ..-.++.+.+.+|
T Consensus 169 ~ai~Ra~ay~eAGAd~i~~e~~----~~~~~~~~i~~~~~--~P~n-~~~---~~~~~~~~eL~~l 224 (275)
T 2ze3_A 169 ETVRRGQAYADAGADGIFVPLA----LQSQDIRALADALR--VPLN-VMA---FPGSPVPRALLDA 224 (275)
T ss_dssp HHHHHHHHHHHTTCSEEECTTC----CCHHHHHHHHHHCS--SCEE-EEC---CTTSCCHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEECCC----CCHHHHHHHHHhcC--CCEE-Eec---CCCCCCHHHHHHc
Confidence 9999999999999999887543 56666655544442 6873 442 1124555555554
No 50
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=96.77 E-value=0.054 Score=51.08 Aligned_cols=124 Identities=16% Similarity=0.154 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcc--------CcCCCCHHHHHHHHHHHHHhhC-CCcEEEEecCC---CCHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTG--------EGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGS---NSTREAI 143 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstG--------E~~~LT~~Er~~li~~~v~~~~-grvpViagvg~---~st~~ai 143 (359)
-+.+...+.+..+++.|+.|+-+-+.++ --...+.+|..+-++.+++... +...|++=+.+ ...+++|
T Consensus 91 ~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai 170 (295)
T 1xg4_A 91 SSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAI 170 (295)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHH
Confidence 3677888999999999999999987763 2346788899889989888753 45566665543 2348999
Q ss_pred HHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCC-CCCCCCHHHHHHH
Q 018253 144 HATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSR-TGQDIPPRVIHTM 206 (359)
Q Consensus 144 ~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~-tg~~ls~e~l~~L 206 (359)
+.++.++++|||++++-.+ ++.+++.++-+++ ..|++. |.-.. ..-.++.+.+.++
T Consensus 171 ~ra~ay~eAGAd~i~~e~~----~~~~~~~~i~~~~--~iP~~~-N~~~~g~~p~~~~~eL~~~ 227 (295)
T 1xg4_A 171 ERAQAYVEAGAEMLFPEAI----TELAMYRQFADAV--QVPILA-NITEFGATPLFTTDELRSA 227 (295)
T ss_dssp HHHHHHHHTTCSEEEETTC----CSHHHHHHHHHHH--CSCBEE-ECCSSSSSCCCCHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEeCC----CCHHHHHHHHHHc--CCCEEE-EecccCCCCCCCHHHHHHc
Confidence 9999999999999998643 4666666655555 268755 43210 1123565555554
No 51
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=96.76 E-value=0.084 Score=48.69 Aligned_cols=182 Identities=11% Similarity=0.057 Sum_probs=103.9
Q ss_pred ceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcC----------------CCCHHHHHHHHHHHHHhh
Q 018253 61 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQ----------------LMSWDEHIMLIGHTVNCF 124 (359)
Q Consensus 61 Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~----------------~LT~~Er~~li~~~v~~~ 124 (359)
..+.+.+| -|..|.+...++++.|.+.|+|.|-++...+.-. -+|.+.-.++++.+.+..
T Consensus 17 ~~~i~~i~----~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~ 92 (262)
T 2ekc_A 17 KALVSYLM----VGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEF 92 (262)
T ss_dssp CEEEEEEE----TTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred ceEEEEec----CCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhc
Confidence 34444455 5668889999999999999999999866554311 144455556677776654
Q ss_pred CCCcEEEEecCCCCHHHH---HHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCH
Q 018253 125 GASVKVIGNTGSNSTREA---IHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPP 200 (359)
Q Consensus 125 ~grvpViagvg~~st~~a---i~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~ 200 (359)
+ ++|+++= +..++-.+ -++++.+.++|+|++++. - ...+++.++.+.+-+. +.++..-.|. -+.
T Consensus 93 ~-~~Pi~~m-~y~n~v~~~g~~~f~~~~~~aG~dgvii~--d---l~~ee~~~~~~~~~~~gl~~i~l~~p~-----t~~ 160 (262)
T 2ekc_A 93 P-DIPFLLM-TYYNPIFRIGLEKFCRLSREKGIDGFIVP--D---LPPEEAEELKAVMKKYVLSFVPLGAPT-----STR 160 (262)
T ss_dssp T-TSCEEEE-CCHHHHHHHCHHHHHHHHHHTTCCEEECT--T---CCHHHHHHHHHHHHHTTCEECCEECTT-----CCH
T ss_pred C-CCCEEEE-ecCcHHHHhhHHHHHHHHHHcCCCEEEEC--C---CCHHHHHHHHHHHHHcCCcEEEEeCCC-----CCH
Confidence 2 5788773 22233222 578888999999998873 2 2347777777666554 3332222232 456
Q ss_pred HHHHHHhc-CCCeE---------EEeccCc-h---h---hHhhhhCCceEEEecCC-chhhhhhhhcCCceeecccc
Q 018253 201 RVIHTMAQ-SPNLA---------GVKECVG-N---D---RVEHYTGNGIVVWSGND-DQCHDARWNHGATGVISVTS 259 (359)
Q Consensus 201 e~l~~La~-~pniv---------GiK~ss~-d---~---~l~~~~~~~~~v~~G~d-~~~~~~~l~~Ga~G~is~~a 259 (359)
+.+.++++ ...++ |...... . . ++++..+-.+.+=.|-. ..-... +..|+||+|.|++
T Consensus 161 ~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSa 236 (262)
T 2ekc_A 161 KRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSFADGVVVGSA 236 (262)
T ss_dssp HHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTTSSEEEECHH
T ss_pred HHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcCCCEEEECHH
Confidence 77777763 33333 2332211 1 1 23333332333322332 223333 6789999998865
No 52
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=96.65 E-value=0.015 Score=53.90 Aligned_cols=117 Identities=17% Similarity=0.169 Sum_probs=81.3
Q ss_pred HHHHHHHHHCCCCEEEEccCcc--CcCCCCHHHHHHHHHHHHHhhCC-CcE--EEEecCC---------CCHHHHHHHHH
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTG--EGQLMSWDEHIMLIGHTVNCFGA-SVK--VIGNTGS---------NSTREAIHATE 147 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstG--E~~~LT~~Er~~li~~~v~~~~g-rvp--Viagvg~---------~st~~ai~la~ 147 (359)
.+.+..+++.|++|+-+=|.++ .-...+.+|..+-++.+++.... .+| |++-+.. ...+++|+.++
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 7888888899999999988751 23456888888999888887432 345 7766653 24899999999
Q ss_pred HHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 148 QGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 148 ~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
.++++|||++++--+ ++.+++. +|.++ .|+.+--.|...-..++.+.+.+|
T Consensus 176 a~~eAGAd~i~~e~~----~~~~~~~----~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~l 228 (255)
T 2qiw_A 176 LMEQAGARSVYPVGL----STAEQVE----RLVDAVSVPVNITAHPVDGHGAGDLATLAGL 228 (255)
T ss_dssp HHHHHTCSEEEECCC----CSHHHHH----HHHTTCSSCBEEECBTTTBBTTBCHHHHHHT
T ss_pred HHHHcCCcEEEEcCC----CCHHHHH----HHHHhCCCCEEEEecCCCCCCCCCHHHHHHc
Confidence 999999999998432 5555544 44444 687543334311123677777776
No 53
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=96.62 E-value=0.046 Score=54.04 Aligned_cols=112 Identities=19% Similarity=0.176 Sum_probs=85.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc---------cCcCCCCHHHHHHHHHHHHHhh---CCCcEEEEecCC--------
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTT---------GEGQLMSWDEHIMLIGHTVNCF---GASVKVIGNTGS-------- 136 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~Gst---------GE~~~LT~~Er~~li~~~v~~~---~grvpViagvg~-------- 136 (359)
+.....+.++.++++|+.|+-+=-.+ +--...+.+|..+-++.+++.. +...-|++=+-+
T Consensus 158 ~~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s 237 (433)
T 3eol_A 158 DPLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTS 237 (433)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESC
T ss_pred CcHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCcccccccc
Confidence 34468899999999999999875444 3456678899888787777664 345556665543
Q ss_pred -------------------------CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEe
Q 018253 137 -------------------------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYN 189 (359)
Q Consensus 137 -------------------------~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn 189 (359)
..++++|++++.+.+ |||.+.+-++ .++.+++.++-+.|... .+++.||
T Consensus 238 ~~d~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~---~~~~eei~~f~~~v~~~~P~~~L~~~ 313 (433)
T 3eol_A 238 DIDERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETS---KPDLAQARRFAEAVHKAHPGKLLAYN 313 (433)
T ss_dssp CCSTTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCS---SCCHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred CcccccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCC---CCCHHHHHHHHHHhcccCCCcccccC
Confidence 468999999999998 9999998654 46889999999998764 4578888
Q ss_pred C-CC
Q 018253 190 V-PS 192 (359)
Q Consensus 190 ~-P~ 192 (359)
. |+
T Consensus 314 ~sPs 317 (433)
T 3eol_A 314 CSPS 317 (433)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 5 53
No 54
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=96.34 E-value=0.2 Score=46.21 Aligned_cols=185 Identities=12% Similarity=0.055 Sum_probs=103.8
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCC----------------CCHHHHHHHHHHHHHh
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQL----------------MSWDEHIMLIGHTVNC 123 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~----------------LT~~Er~~li~~~v~~ 123 (359)
+..+.+.+| .|..|.+.+.+.++.+.+.|+|.|-+....++-.. +|.+.-.++++.+.+.
T Consensus 16 ~~~~i~~i~----~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 16 EGAFVPFVT----LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREK 91 (268)
T ss_dssp CCEEEEEEE----TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEee----CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 345555555 56688899999999999999999998765543211 2233334667666655
Q ss_pred hCCCcEEEEecCCCCHH---HHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCC
Q 018253 124 FGASVKVIGNTGSNSTR---EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIP 199 (359)
Q Consensus 124 ~~grvpViagvg~~st~---~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls 199 (359)
. -++||++=+.. +.- ..-+.++.+.++|+|++.+. .. ..+++.++.+.+-+. +..+..=.|. -+
T Consensus 92 ~-~~~Pv~lm~y~-n~v~~~g~~~~~~~~~~aGadgii~~--d~---~~e~~~~~~~~~~~~g~~~i~l~~p~-----t~ 159 (268)
T 1qop_A 92 H-PTIPIGLLMYA-NLVFNNGIDAFYARCEQVGVDSVLVA--DV---PVEESAPFRQAALRHNIAPIFICPPN-----AD 159 (268)
T ss_dssp C-SSSCEEEEECH-HHHHTTCHHHHHHHHHHHTCCEEEET--TC---CGGGCHHHHHHHHHTTCEEECEECTT-----CC
T ss_pred C-CCCCEEEEEcc-cHHHHhhHHHHHHHHHHcCCCEEEEc--CC---CHHHHHHHHHHHHHcCCcEEEEECCC-----CC
Confidence 1 25787652211 111 12577888899999998874 22 125566666666555 3433333442 45
Q ss_pred HHHHHHHhc-CCCeEEEe---------ccCc--h-h---hHhhhhCCceEEEecCC-chhhhhhhhcCCceeeccccc
Q 018253 200 PRVIHTMAQ-SPNLAGVK---------ECVG--N-D---RVEHYTGNGIVVWSGND-DQCHDARWNHGATGVISVTSN 260 (359)
Q Consensus 200 ~e~l~~La~-~pnivGiK---------~ss~--d-~---~l~~~~~~~~~v~~G~d-~~~~~~~l~~Ga~G~is~~an 260 (359)
.+.++++++ ...++.+= .... . . ++++..+-.+.+=.|-. ..-...++..|+||+|.|++-
T Consensus 160 ~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai 237 (268)
T 1qop_A 160 DDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAI 237 (268)
T ss_dssp HHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHhhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 677777763 44444331 1101 1 1 23333322333322333 122233367899999998663
No 55
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=96.34 E-value=0.039 Score=51.90 Aligned_cols=122 Identities=11% Similarity=0.037 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcc-------CcCCCCHHHHHHHHHHHHHhhC-CCcEEEEecC--CCCHHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTG-------EGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTG--SNSTREAIHAT 146 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstG-------E~~~LT~~Er~~li~~~v~~~~-grvpViagvg--~~st~~ai~la 146 (359)
+.+...+.+..+++.|+.|+-+=+.++ .+...+.+|..+-++.+++... +...|++=+- ....+++|+.+
T Consensus 95 ~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra 174 (287)
T 3b8i_A 95 NALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRT 174 (287)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHH
Confidence 678888999999999999999877753 2227899999999999998753 3455665432 34568999999
Q ss_pred HHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 147 EQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 147 ~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
+.++++|||++++-.+ ++.+++.++-+++ ..|+++-. ...+ -.++.+.+.+|
T Consensus 175 ~ay~eAGAd~i~~e~~----~~~~~~~~i~~~~--~~P~ii~~-~g~~-~~~~~~eL~~l 226 (287)
T 3b8i_A 175 LAYQEAGADGICLVGV----RDFAHLEAIAEHL--HIPLMLVT-YGNP-QLRDDARLARL 226 (287)
T ss_dssp HHHHHTTCSEEEEECC----CSHHHHHHHHTTC--CSCEEEEC-TTCG-GGCCHHHHHHT
T ss_pred HHHHHcCCCEEEecCC----CCHHHHHHHHHhC--CCCEEEeC-CCCC-CCCCHHHHHHc
Confidence 9999999999988642 5555554433332 16988421 1122 24666666665
No 56
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=95.93 E-value=0.096 Score=48.00 Aligned_cols=174 Identities=15% Similarity=0.135 Sum_probs=99.8
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCccC----------------cCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGE----------------GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 136 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE----------------~~~LT~~Er~~li~~~v~~~~grvpViagvg~ 136 (359)
.|..|.+.+.+.++.+.+.|++.|-+....++ -.-+|.++-.++++.+.+. -++||++-...
T Consensus 26 ~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~--~~~Pv~~m~~~ 103 (262)
T 1rd5_A 26 AGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE--LSCPVVLLSYY 103 (262)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG--CSSCEEEECCS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CCCCEEEEecC
Confidence 45567799999999999999999988654432 1226788888888887765 36888764322
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCeEE
Q 018253 137 NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAG 214 (359)
Q Consensus 137 ~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~-~pnivG 214 (359)
+... ....+.+.++|+|++.+. .. +.+++.++.+.+.+. ++.++.=.|. -+.+.++++.+ ...+++
T Consensus 104 -~~~~-~~~~~~a~~aGadgv~v~--d~---~~~~~~~~~~~~~~~g~~~i~~~a~~-----t~~e~~~~~~~~~~g~v~ 171 (262)
T 1rd5_A 104 -KPIM-FRSLAKMKEAGVHGLIVP--DL---PYVAAHSLWSEAKNNNLELVLLTTPA-----IPEDRMKEITKASEGFVY 171 (262)
T ss_dssp -HHHH-SCCTHHHHHTTCCEEECT--TC---BTTTHHHHHHHHHHTTCEECEEECTT-----SCHHHHHHHHHHCCSCEE
T ss_pred -cHHH-HHHHHHHHHcCCCEEEEc--CC---ChhhHHHHHHHHHHcCCceEEEECCC-----CCHHHHHHHHhcCCCeEE
Confidence 2221 111233889999998873 11 124466666666554 4433332332 34566666653 333333
Q ss_pred E---------eccCch--h----hHhhhhCCceEEEecCC-chhhhhhhhcCCceeeccccc
Q 018253 215 V---------KECVGN--D----RVEHYTGNGIVVWSGND-DQCHDARWNHGATGVISVTSN 260 (359)
Q Consensus 215 i---------K~ss~d--~----~l~~~~~~~~~v~~G~d-~~~~~~~l~~Ga~G~is~~an 260 (359)
+ |..... . ++++..+-.+.+-.|-. ..-....+..|++|++.|++-
T Consensus 172 ~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai 233 (262)
T 1rd5_A 172 LVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAM 233 (262)
T ss_dssp EECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred EecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 2 211111 1 12222233444444544 233344467899999988663
No 57
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.74 E-value=0.028 Score=52.90 Aligned_cols=86 Identities=13% Similarity=0.135 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCC----------------------HHHHHHHHHHHHHhhCCCcEEEEe
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMS----------------------WDEHIMLIGHTVNCFGASVKVIGN 133 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT----------------------~~Er~~li~~~v~~~~grvpViag 133 (359)
+|.+.+.++++.+.+.|+++|.+-+++++...+. ...-.++++.+.+.+++++|||+.
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~ 248 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGT 248 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEE
Confidence 5778888899999999999999998874321111 122356777777777778999976
Q ss_pred cCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 018253 134 TGSNSTREAIHATEQGFAVGMHAALHINPYYG 165 (359)
Q Consensus 134 vg~~st~~ai~la~~a~~~Gadav~v~pP~y~ 165 (359)
=|=.+.+++.+... +|||+|++-.+.+.
T Consensus 249 GGI~~~~da~~~l~----~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 249 GGIETGQDAFEHLL----CGATMLQIGTALHK 276 (311)
T ss_dssp SSCCSHHHHHHHHH----HTCSEEEECHHHHH
T ss_pred CCCCCHHHHHHHHH----cCCCEEEEchHHHh
Confidence 55557777777663 69999999988764
No 58
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=95.72 E-value=0.16 Score=46.96 Aligned_cols=161 Identities=14% Similarity=0.198 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-------CCCCHHHHHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-------GSNSTREAIHATEQG 149 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-------g~~st~~ai~la~~a 149 (359)
..+.++++++..++.|++++++.-. +++.+. ..++++++.+ +...++.-+..++.|
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~~--------------~v~~~~---~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~A 101 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQRG--------------IAEKYY---DGSVPLILKLNGKTTLYNGEPVSVANCSVEEA 101 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECHH--------------HHHHHC---CSSSCEEEECEECCTTCCSSCCCEESSCHHHH
T ss_pred chhhHHHHHHHHHhhCCCEEEECHH--------------HHHHhh---cCCCcEEEEEeCCCCcCCCCccchHHHHHHHH
Confidence 4677889999999999999997722 233333 3346766643 222233334567788
Q ss_pred HhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-----CCeEEEeCCCCCCCCC----CHHHHHH---Hh-c-CCCeEEE
Q 018253 150 FAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-----GPTIIYNVPSRTGQDI----PPRVIHT---MA-Q-SPNLAGV 215 (359)
Q Consensus 150 ~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-----~PiiiYn~P~~tg~~l----s~e~l~~---La-~-~pnivGi 215 (359)
.+.|||++-+.- ++...+.+++++..+++.+. +|+|+-..+ -|.++ +++.+.+ ++ + -..++++
T Consensus 102 i~~Ga~~v~~~~-nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~--~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt 178 (263)
T 1w8s_A 102 VSLGASAVGYTI-YPGSGFEWKMFEELARIKRDAVKFDLPLVVESFP--RGGKVVNETAPEIVAYAARIALELGADAMKI 178 (263)
T ss_dssp HHTTCSEEEEEE-CTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECC--CSTTCCCTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHCCCCEEEEEE-ecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeC--CCCccccCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 889999997652 33445677788888888653 698886555 24444 7777755 44 2 2456555
Q ss_pred eccCchhh---HhhhhCC-ceEEEecCCc----h---hhhhhhhcCCceeecc
Q 018253 216 KECVGNDR---VEHYTGN-GIVVWSGNDD----Q---CHDARWNHGATGVISV 257 (359)
Q Consensus 216 K~ss~d~~---l~~~~~~-~~~v~~G~d~----~---~~~~~l~~Ga~G~is~ 257 (359)
..+.+-.. +.+..+. .+....|-.. . .+...+..|++|+..+
T Consensus 179 ~~~~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvg 231 (263)
T 1w8s_A 179 KYTGDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVG 231 (263)
T ss_dssp ECCSSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred cCCCCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 54321122 3333333 4554445431 1 2223357899988766
No 59
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=95.63 E-value=0.068 Score=53.22 Aligned_cols=86 Identities=19% Similarity=0.206 Sum_probs=64.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCC----------C----HHHHHHHHHHHHHhhCCCcEEEEecCCCCHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLM----------S----WDEHIMLIGHTVNCFGASVKVIGNTGSNSTRE 141 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~L----------T----~~Er~~li~~~v~~~~grvpViagvg~~st~~ 141 (359)
++.+.+..+++.+.+.|++||.+-++|.+...+ | ..--.+++..+.+.+++++|||+.=|=.+.++
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D 387 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 387 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH
Confidence 566678889999999999999999998853222 1 12235788888888888999987444456777
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCC
Q 018253 142 AIHATEQGFAVGMHAALHINPYYG 165 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~pP~y~ 165 (359)
+.+..+ +|||+|++-.++.+
T Consensus 388 A~e~l~----aGAd~Vqigrall~ 407 (443)
T 1tv5_A 388 ALEKIE----AGASVCQLYSCLVF 407 (443)
T ss_dssp HHHHHH----TTEEEEEESHHHHH
T ss_pred HHHHHH----cCCCEEEEcHHHHh
Confidence 777664 89999999887543
No 60
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=95.62 E-value=0.051 Score=53.64 Aligned_cols=86 Identities=19% Similarity=0.202 Sum_probs=65.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCC----------CC----HHHHHHHHHHHHHhhCCCcEEEEecCCCCHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQL----------MS----WDEHIMLIGHTVNCFGASVKVIGNTGSNSTRE 141 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~----------LT----~~Er~~li~~~v~~~~grvpViagvg~~st~~ 141 (359)
+|.+.+..+++.+.+.|++||.+.++|++-.. || ..--.+++..+.+.+++++|||+.=|=.+.++
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eD 359 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 359 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHH
Confidence 45667899999999999999999999985321 11 12335788888888888999997555556777
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCC
Q 018253 142 AIHATEQGFAVGMHAALHINPYYG 165 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~pP~y~ 165 (359)
+.+..+ +|||+|++-.+.++
T Consensus 360 a~e~l~----aGAd~VqIgra~l~ 379 (415)
T 3i65_A 360 ALEKIE----AGASVCQLYSCLVF 379 (415)
T ss_dssp HHHHHH----HTEEEEEESHHHHH
T ss_pred HHHHHH----cCCCEEEEcHHHHh
Confidence 777664 69999999887653
No 61
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=95.55 E-value=1.1 Score=41.39 Aligned_cols=175 Identities=13% Similarity=0.072 Sum_probs=102.9
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEccCc------cCc----------CCCCHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018253 72 PDGRFDLEAYDDLVNMQIVNGAEGMIVGGTT------GEG----------QLMSWDEHIMLIGHTVNCFGASVKVIGNTG 135 (359)
Q Consensus 72 ~dg~ID~~~l~~li~~li~~Gv~Gl~v~Gst------GE~----------~~LT~~Er~~li~~~v~~~~grvpViagvg 135 (359)
--|.-|++.+.+.++.|.++|+|.|=+.=-. |.. .-+|.+.-.++++.+.+. .-++|++.=+.
T Consensus 25 ~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~-~~~~Pivlm~Y 103 (267)
T 3vnd_A 25 TIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQ-HPDMPIGLLLY 103 (267)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CTTCCEEEEEC
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCCEEEEec
Confidence 3567899999999999999999988766111 110 115566666777776654 13678776444
Q ss_pred CCCHH--HHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCC
Q 018253 136 SNSTR--EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPN 211 (359)
Q Consensus 136 ~~st~--~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~-~pn 211 (359)
.+... ..-++++.++++|+|++++. .. ..++..++.+.+.+. +..+..=.|. -+.+.++++++ .+.
T Consensus 104 ~npv~~~g~e~f~~~~~~aGvdgvii~--Dl---p~ee~~~~~~~~~~~gl~~i~liaP~-----t~~eri~~i~~~~~g 173 (267)
T 3vnd_A 104 ANLVFANGIDEFYTKAQAAGVDSVLIA--DV---PVEESAPFSKAAKAHGIAPIFIAPPN-----ADADTLKMVSEQGEG 173 (267)
T ss_dssp HHHHHHHCHHHHHHHHHHHTCCEEEET--TS---CGGGCHHHHHHHHHTTCEEECEECTT-----CCHHHHHHHHHHCCS
T ss_pred CcHHHHhhHHHHHHHHHHcCCCEEEeC--CC---CHhhHHHHHHHHHHcCCeEEEEECCC-----CCHHHHHHHHHhCCC
Confidence 33222 23678999999999998884 22 225566666655554 3333222442 34688888874 455
Q ss_pred eEEE---eccCch-----h-------hHhhhhCCceEEEecCCc---hhhhhhhhcCCceeecccc
Q 018253 212 LAGV---KECVGN-----D-------RVEHYTGNGIVVWSGNDD---QCHDARWNHGATGVISVTS 259 (359)
Q Consensus 212 ivGi---K~ss~d-----~-------~l~~~~~~~~~v~~G~d~---~~~~~~l~~Ga~G~is~~a 259 (359)
++.+ .-.+|. . ++++.. +..+..|..- .-....+..|+||+|.|++
T Consensus 174 fvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSa 237 (267)
T 3vnd_A 174 YTYLLSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGAISGSA 237 (267)
T ss_dssp CEEESCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred cEEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHH
Confidence 5555 221121 1 122222 3445555431 1222146789999999864
No 62
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=95.53 E-value=0.07 Score=50.75 Aligned_cols=86 Identities=15% Similarity=0.113 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCc------------CCCC----HHHHHHHHHHHHHhhCCCcEEEEecCCCCH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEG------------QLMS----WDEHIMLIGHTVNCFGASVKVIGNTGSNST 139 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~------------~~LT----~~Er~~li~~~v~~~~grvpViagvg~~st 139 (359)
++.+.+.++++.+.+.|+++|.+.+++... .-++ ..-..++++.+.+.+++++|||+.=|=.+.
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~ 301 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSV 301 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 677788899999999999999998876311 1122 223457777888888888999974444466
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCC
Q 018253 140 REAIHATEQGFAVGMHAALHINPYYG 165 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~y~ 165 (359)
+++.+..+ +|||+|++..++.+
T Consensus 302 ~da~~~l~----~GAd~V~igr~~l~ 323 (336)
T 1f76_A 302 IAAREKIA----AGASLVQIYSGFIF 323 (336)
T ss_dssp HHHHHHHH----HTCSEEEESHHHHH
T ss_pred HHHHHHHH----CCCCEEEeeHHHHh
Confidence 66666554 69999999877543
No 63
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.36 E-value=0.084 Score=49.68 Aligned_cols=105 Identities=11% Similarity=-0.005 Sum_probs=76.7
Q ss_pred HHHHHHHHCCCCEEEEccCccCcC-----CCCHHHHHHHHHHHHHhhCC-CcEEEEec---C------CCCHHHHHHHHH
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFGA-SVKVIGNT---G------SNSTREAIHATE 147 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~-----~LT~~Er~~li~~~v~~~~g-rvpViagv---g------~~st~~ai~la~ 147 (359)
+.++..+++|++.+-+..++.|.+ .+|.+|-.+.++.+++.+.. .+.|-+.+ . ..+.++++++++
T Consensus 87 ~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~ 166 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVAR 166 (302)
T ss_dssp HHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHH
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHH
Confidence 566777889999999988888864 48999988888888886542 34553222 1 247889999999
Q ss_pred HHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC---CeEEE
Q 018253 148 QGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIY 188 (359)
Q Consensus 148 ~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~---PiiiY 188 (359)
.+.+.|+|.+.+.. .....+++++.+.++.|.+.. |+.++
T Consensus 167 ~~~~~G~d~i~l~D-T~G~~~P~~~~~lv~~l~~~~~~~~l~~H 209 (302)
T 2ftp_A 167 ELQQMGCYEVSLGD-TIGVGTAGATRRLIEAVASEVPRERLAGH 209 (302)
T ss_dssp HHHHTTCSEEEEEE-SSSCCCHHHHHHHHHHHTTTSCGGGEEEE
T ss_pred HHHHcCCCEEEEeC-CCCCcCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 99999999877763 333467888888888888764 45554
No 64
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=95.31 E-value=0.41 Score=45.89 Aligned_cols=127 Identities=10% Similarity=0.013 Sum_probs=79.9
Q ss_pred CCHHHHHHHHH-------HHHHCCCCEEEEccCcc---------------CcCCCCHHHHH----HHHHHHHHhhCCCcE
Q 018253 76 FDLEAYDDLVN-------MQIVNGAEGMIVGGTTG---------------EGQLMSWDEHI----MLIGHTVNCFGASVK 129 (359)
Q Consensus 76 ID~~~l~~li~-------~li~~Gv~Gl~v~GstG---------------E~~~LT~~Er~----~li~~~v~~~~grvp 129 (359)
+..+.++++++ ...++|.|||=+.+..| ..+-=|.+.|. ++++.+++.++.+.|
T Consensus 142 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~p 221 (349)
T 3hgj_A 142 LDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELP 221 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCce
Confidence 55555555554 45579999999998774 11122566775 455566666666778
Q ss_pred EEEecC-------CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC----C-CHHHHHHHHHHHHhc--CCeEEEeCCCCCC
Q 018253 130 VIGNTG-------SNSTREAIHATEQGFAVGMHAALHINPYYGK----T-SLEGLISHFDSVLSM--GPTIIYNVPSRTG 195 (359)
Q Consensus 130 Viagvg-------~~st~~ai~la~~a~~~Gadav~v~pP~y~~----~-s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg 195 (359)
|.+=++ +.+.++++++++..++.|+|.+-+....+.. + .+..-..+.+.|.+. .||+. .|
T Consensus 222 V~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~------~G 295 (349)
T 3hgj_A 222 LFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGA------VG 295 (349)
T ss_dssp EEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEE------CS
T ss_pred EEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEE------EC
Confidence 877444 3578999999999999999999887532211 0 111123455555554 56553 23
Q ss_pred CCCCHHHHHHHhc
Q 018253 196 QDIPPRVIHTMAQ 208 (359)
Q Consensus 196 ~~ls~e~l~~La~ 208 (359)
---+++...++.+
T Consensus 296 gi~t~e~a~~~l~ 308 (349)
T 3hgj_A 296 LITTPEQAETLLQ 308 (349)
T ss_dssp SCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 3346777777664
No 65
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=95.23 E-value=0.081 Score=51.40 Aligned_cols=84 Identities=20% Similarity=0.217 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCc------------CCCC----HHHHHHHHHHHHHhhCCCcEEEEecCCCCH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEG------------QLMS----WDEHIMLIGHTVNCFGASVKVIGNTGSNST 139 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~------------~~LT----~~Er~~li~~~v~~~~grvpViagvg~~st 139 (359)
+|.+.+..+++.+.+.|++||.+-++|-.. --|| ..--.+++..+.+.+++++|||+.=|=.+.
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~ 310 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSG 310 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCH
Confidence 566788999999999999999998887321 1122 122357888888888889999975555567
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCC
Q 018253 140 REAIHATEQGFAVGMHAALHINPY 163 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~ 163 (359)
+++.+..+ +|||+|++-.+.
T Consensus 311 ~da~~~l~----~GAd~V~vgra~ 330 (367)
T 3zwt_A 311 QDALEKIR----AGASLVQLYTAL 330 (367)
T ss_dssp HHHHHHHH----HTCSEEEESHHH
T ss_pred HHHHHHHH----cCCCEEEECHHH
Confidence 77777665 699999999886
No 66
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.21 E-value=0.073 Score=49.66 Aligned_cols=126 Identities=13% Similarity=0.030 Sum_probs=87.3
Q ss_pred eecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC---------
Q 018253 66 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS--------- 136 (359)
Q Consensus 66 l~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~--------- 136 (359)
.=|||- ....+.+...+.+.++++.|++|+-+=|. +|..+.++.+++ .++||+.++|-
T Consensus 83 aD~pfg-sy~~s~~~a~~na~rl~kaGa~aVklEdg---------~e~~~~I~al~~---agIpV~gHiGLtPQs~~~~g 149 (275)
T 1o66_A 83 SDLPFG-AYQQSKEQAFAAAAELMAAGAHMVKLEGG---------VWMAETTEFLQM---RGIPVCAHIGLTPQSVFAFG 149 (275)
T ss_dssp EECCTT-SSSSCHHHHHHHHHHHHHTTCSEEEEECS---------GGGHHHHHHHHH---TTCCEEEEEESCGGGTTC--
T ss_pred EECCCC-CccCCHHHHHHHHHHHHHcCCcEEEECCc---------HHHHHHHHHHHH---cCCCeEeeeccCceeecccC
Confidence 568884 34467788888888899999999998776 255555665554 46888855441
Q ss_pred --------CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-CCCCCCCCCHHHHHH
Q 018253 137 --------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV-PSRTGQDIPPRVIHT 205 (359)
Q Consensus 137 --------~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~-P~~tg~~ls~e~l~~ 205 (359)
...+++++.++.++++|||++++--. + . ++ .++|.++ .|++-.-. |...|+-|=...+.-
T Consensus 150 gf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~v----p-~-~~---a~~it~~l~iP~igIGaG~~~dgQvLV~~D~lG 220 (275)
T 1o66_A 150 GYKVQGRGGKAQALLNDAKAHDDAGAAVVLMECV----L-A-EL---AKKVTETVSCPTIGIGAGADCDGQVLVMHDMLG 220 (275)
T ss_dssp ---------CHHHHHHHHHHHHHTTCSEEEEESC----C-H-HH---HHHHHHHCSSCEEEESSCSCSSEEEECHHHHTT
T ss_pred CeEEEeChHHHHHHHHHHHHHHHcCCcEEEEecC----C-H-HH---HHHHHHhCCCCEEEECCCCCCCcceeeHHhhcC
Confidence 23589999999999999999988542 2 2 33 3467665 68887654 666677776666666
Q ss_pred Hh-c-CCCeE
Q 018253 206 MA-Q-SPNLA 213 (359)
Q Consensus 206 La-~-~pniv 213 (359)
|. + .|.++
T Consensus 221 ~~~~~~pkf~ 230 (275)
T 1o66_A 221 IFPGKTAKFV 230 (275)
T ss_dssp CSSSSCCTTC
T ss_pred CCCCCCCCch
Confidence 65 3 47663
No 67
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=95.04 E-value=0.04 Score=54.03 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=63.0
Q ss_pred HHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCC
Q 018253 84 LVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPY 163 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~ 163 (359)
.++.+.+.|+++|.+.|..|....-... ..+.+..+++.+++++|||+.=|=.+-.++++.. .+|||+|++-.|+
T Consensus 265 ~A~~a~~aGad~I~vs~~ggr~~~~g~~-~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kal----alGAd~V~iGr~~ 339 (392)
T 2nzl_A 265 DAREAVKHGLNGILVSNHGARQLDGVPA-TIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKAL----ALGAKAVFVGRPI 339 (392)
T ss_dssp HHHHHHHTTCCEEEECCGGGTSSTTCCC-HHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHH----HTTCSEEEECHHH
T ss_pred HHHHHHHcCCCEEEeCCCCCCcCCCCcC-hHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHH----HhCCCeeEECHHH
Confidence 3677889999999998877743222221 2345556666777789999855544566665443 4899999999998
Q ss_pred CCCC---CHHHHHHHHHHHHhc
Q 018253 164 YGKT---SLEGLISHFDSVLSM 182 (359)
Q Consensus 164 y~~~---s~~~l~~yf~~Ia~a 182 (359)
++.. .++++.++++.+.+.
T Consensus 340 l~~~~~~g~~gv~~~l~~l~~e 361 (392)
T 2nzl_A 340 VWGLAFQGEKGVQDVLEILKEE 361 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcChHHHHHHHHHHHHH
Confidence 7653 345666666666543
No 68
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=95.02 E-value=0.037 Score=53.80 Aligned_cols=94 Identities=16% Similarity=0.147 Sum_probs=62.2
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
..++.+.+.|+++|.+.+..|....-... -.+++..+++.+++++|||+.=|=.+..++++. ..+|||+|++-.|
T Consensus 241 e~a~~a~~~Gad~I~vs~~ggr~~~~g~~-~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~ka----lalGAd~V~iGr~ 315 (368)
T 2nli_A 241 EDADMAIKRGASGIWVSNHGARQLYEAPG-SFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKA----LASGADVVALGRP 315 (368)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCSSCCC-HHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHH----HHTTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCCCCCC-hHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHH----HHcCCCEEEECHH
Confidence 34567789999999998877742211111 225555666677778999985554456666544 3489999999999
Q ss_pred CCCCC---CHHHHHHHHHHHHh
Q 018253 163 YYGKT---SLEGLISHFDSVLS 181 (359)
Q Consensus 163 ~y~~~---s~~~l~~yf~~Ia~ 181 (359)
+.+.. .++++.++++.+.+
T Consensus 316 ~l~~~~~~G~~gv~~~l~~l~~ 337 (368)
T 2nli_A 316 VLFGLALGGWQGAYSVLDYFQK 337 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcChHHHHHHHHHHHH
Confidence 87642 34566666665554
No 69
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.64 E-value=0.21 Score=46.62 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=75.3
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcC-----CCCHHHHHHHHHHHHHhhC-CCcEEE--Eec-------CCCCHHHHHHHH
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFG-ASVKVI--GNT-------GSNSTREAIHAT 146 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~-----~LT~~Er~~li~~~v~~~~-grvpVi--agv-------g~~st~~ai~la 146 (359)
.+.++..+++|++.+.+..+++|.+ .+|.+|-.+.++.+++.+. ..++|- ++. +..+.++.++++
T Consensus 82 ~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~ 161 (295)
T 1ydn_A 82 MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVT 161 (295)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHH
Confidence 3456677889999998887776543 4688887777777776543 235554 222 235789999999
Q ss_pred HHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC---CeEEE
Q 018253 147 EQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIY 188 (359)
Q Consensus 147 ~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~---PiiiY 188 (359)
+.+.+.|+|.+.+... ....+++++.+.++.|.+.. |+.++
T Consensus 162 ~~~~~~G~d~i~l~Dt-~G~~~P~~~~~lv~~l~~~~~~~~l~~H 205 (295)
T 1ydn_A 162 EQLFSLGCHEVSLGDT-IGRGTPDTVAAMLDAVLAIAPAHSLAGH 205 (295)
T ss_dssp HHHHHHTCSEEEEEET-TSCCCHHHHHHHHHHHHTTSCGGGEEEE
T ss_pred HHHHhcCCCEEEecCC-CCCcCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9999999998888753 34467888888888888764 45544
No 70
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=94.63 E-value=0.71 Score=41.50 Aligned_cols=126 Identities=15% Similarity=0.037 Sum_probs=90.3
Q ss_pred eEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC-CcEEEEecCCCCHH
Q 018253 62 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSNSTR 140 (359)
Q Consensus 62 i~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g-rvpViagvg~~st~ 140 (359)
+-...++-| +.|.-..+....-++.-++.|++.|-+--.-|..-+=.+++-.+-+..+++.+.+ .+|||.-++-.+.+
T Consensus 55 v~v~~vigF-P~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e 133 (220)
T 1ub3_A 55 FRLVTVVGF-PLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPE 133 (220)
T ss_dssp SEEEEEEST-TTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHH
T ss_pred ceEEEEecC-CCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHH
Confidence 444555566 4666777888899999999999999777777754444566666677777776654 58899988888889
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCC-CCCCHHHHHHHHHHHHhcCCeEEE
Q 018253 141 EAIHATEQGFAVGMHAALHINPYY-GKTSLEGLISHFDSVLSMGPTIIY 188 (359)
Q Consensus 141 ~ai~la~~a~~~Gadav~v~pP~y-~~~s~~~l~~yf~~Ia~a~PiiiY 188 (359)
+-...+|.+.++|||.|=...-|. ...+.+++..+-+.+....||..-
T Consensus 134 ~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~vg~~v~Vkaa 182 (220)
T 1ub3_A 134 EIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVAQGRAQVKAA 182 (220)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhhCCCCeEEEE
Confidence 999999999999999887765444 334666655555444333566554
No 71
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=94.61 E-value=0.05 Score=52.59 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=62.9
Q ss_pred HHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCC
Q 018253 84 LVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPY 163 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~ 163 (359)
.++.+.+.|+++|.+.|+.|-...-.. --.+++..+++.+.+++|||+.=|=.+-.++++.. .+|||+|++-.|+
T Consensus 230 ~A~~a~~~GaD~I~vsn~GG~~~d~~~-~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaL----alGA~aV~iGr~~ 304 (352)
T 3sgz_A 230 DAELAMKHNVQGIVVSNHGGRQLDEVS-ASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKAL----ALGARCIFLGRPI 304 (352)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSSCSSC-CHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH----HTTCSEEEESHHH
T ss_pred HHHHHHHcCCCEEEEeCCCCCccCCCc-cHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHH----HcCCCEEEECHHH
Confidence 356678999999999887774221111 12345555666777899999855545666665544 4899999999998
Q ss_pred CCCC---CHHHHHHHHHHHHhc
Q 018253 164 YGKT---SLEGLISHFDSVLSM 182 (359)
Q Consensus 164 y~~~---s~~~l~~yf~~Ia~a 182 (359)
.+.. .++++.++++.+.+.
T Consensus 305 l~~l~~~G~~gv~~~l~~l~~e 326 (352)
T 3sgz_A 305 LWGLACKGEDGVKEVLDILTAE 326 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHHHHH
Confidence 7642 346666666666543
No 72
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.57 E-value=0.78 Score=41.59 Aligned_cols=188 Identities=14% Similarity=0.089 Sum_probs=107.5
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
..|++|.+.. .|.+....+++.+++.|++.+=+--+| .+-.+.++.+.+..+ + +++|.|.--
T Consensus 33 ~~~vv~Vir~-------~~~~~a~~~a~al~~gGi~~iEvt~~t--------~~a~e~I~~l~~~~~-~--~~iGaGTVl 94 (232)
T 4e38_A 33 ALKVIPVIAI-------DNAEDIIPLGKVLAENGLPAAEITFRS--------DAAVEAIRLLRQAQP-E--MLIGAGTIL 94 (232)
T ss_dssp HHCEEEEECC-------SSGGGHHHHHHHHHHTTCCEEEEETTS--------TTHHHHHHHHHHHCT-T--CEEEEECCC
T ss_pred hCCEEEEEEc-------CCHHHHHHHHHHHHHCCCCEEEEeCCC--------CCHHHHHHHHHHhCC-C--CEEeECCcC
Confidence 3467776543 234678899999999999998774433 234567776677664 3 355655433
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhc-CCCeEEEec
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAGVKE 217 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~La~-~pnivGiK~ 217 (359)
+.+.++.|.++|||.++. |.+ ..++.++.++- ..|++ .|+. +++.+.+-.+ =..++.+=-
T Consensus 95 ---t~~~a~~Ai~AGA~fIvs--P~~----~~~vi~~~~~~--gi~~i-------pGv~-TptEi~~A~~~Gad~vK~FP 155 (232)
T 4e38_A 95 ---NGEQALAAKEAGATFVVS--PGF----NPNTVRACQEI--GIDIV-------PGVN-NPSTVEAALEMGLTTLKFFP 155 (232)
T ss_dssp ---SHHHHHHHHHHTCSEEEC--SSC----CHHHHHHHHHH--TCEEE-------CEEC-SHHHHHHHHHTTCCEEEECS
T ss_pred ---CHHHHHHHHHcCCCEEEe--CCC----CHHHHHHHHHc--CCCEE-------cCCC-CHHHHHHHHHcCCCEEEECc
Confidence 377788899999998863 432 35566664431 13333 2433 6655554433 344443311
Q ss_pred c--Cch-hhHhhhhC--CceEEEe--cCCchhhhhhhhcCCceeecccccccHHHHHHHHHcCCcHHHHHHHHHHHH
Q 018253 218 C--VGN-DRVEHYTG--NGIVVWS--GNDDQCHDARWNHGATGVISVTSNLVPGMMRELMFGGKNPSLNTKLFPLIE 287 (359)
Q Consensus 218 s--s~d-~~l~~~~~--~~~~v~~--G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~ag~a~~l~~~l~~l~~ 287 (359)
+ .+. ..++++.. +++.++. |-+..-+..++..|+.+++.|+ ++.|.. +.++|+..++.++...+.+
T Consensus 156 a~~~gG~~~lkal~~p~p~ip~~ptGGI~~~n~~~~l~aGa~~~vgGs-~l~~~~---~i~~~~~~~i~~~a~~~~~ 228 (232)
T 4e38_A 156 AEASGGISMVKSLVGPYGDIRLMPTGGITPSNIDNYLAIPQVLACGGT-WMVDKK---LVTNGEWDEIARLTREIVE 228 (232)
T ss_dssp TTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBCCEEEC-GGGCHH---HHHTTCHHHHHHHHHHHHH
T ss_pred CccccCHHHHHHHHHHhcCCCeeeEcCCCHHHHHHHHHCCCeEEEECc-hhcChH---HhhcCCHHHHHHHHHHHHH
Confidence 1 111 23444332 3444443 5554455667888999877654 455443 3356666666655555544
No 73
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=94.50 E-value=0.18 Score=47.20 Aligned_cols=84 Identities=10% Similarity=-0.046 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHHHHCCCC-EEEEccCc----cCcCCC-CHHHHHHHHHHHHHhhCCCcEEEEecCC-CCHHHHHHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAE-GMIVGGTT----GEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATEQ 148 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~-Gl~v~Gst----GE~~~L-T~~Er~~li~~~v~~~~grvpViagvg~-~st~~ai~la~~ 148 (359)
-+.+.+.+.++.+.+.|++ +|-++-+. |.-... +.+...++++.+.+.+ ++||++=+.. .+.++..++++.
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~Pv~vKi~~~~~~~~~~~~a~~ 180 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKPLGVKLPPYFDLVHFDIMAEI 180 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSCEEEEECCCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHHH
Confidence 5788999999999999999 99987641 211222 6777778887777655 5799885553 367788899999
Q ss_pred HHhCCCCEEEEcC
Q 018253 149 GFAVGMHAALHIN 161 (359)
Q Consensus 149 a~~~Gadav~v~p 161 (359)
++++|+|++.+..
T Consensus 181 ~~~~G~d~i~v~~ 193 (311)
T 1jub_A 181 LNQFPLTYVNSVN 193 (311)
T ss_dssp HTTSCCCEEEECC
T ss_pred HHHcCCcEEEecC
Confidence 9999999998865
No 74
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.44 E-value=0.097 Score=49.19 Aligned_cols=87 Identities=13% Similarity=0.101 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHHCC-CCEEEEccCccCcCC---------C---------C----HHHHHHHHHHHHHhhCCCcEEEE
Q 018253 76 FDLEAYDDLVNMQIVNG-AEGMIVGGTTGEGQL---------M---------S----WDEHIMLIGHTVNCFGASVKVIG 132 (359)
Q Consensus 76 ID~~~l~~li~~li~~G-v~Gl~v~GstGE~~~---------L---------T----~~Er~~li~~~v~~~~grvpVia 132 (359)
+|.+.+.++++.+.+.| +++|.+.+++|.... + | ...-.+.++.+.+.+ +++|||+
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~ 249 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFG 249 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEE
Confidence 57788899999999999 999999988852111 1 1 122346777777777 6899997
Q ss_pred ecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCC-CC
Q 018253 133 NTGSNSTREAIHATEQGFAVGMHAALHINPYYG-KT 167 (359)
Q Consensus 133 gvg~~st~~ai~la~~a~~~Gadav~v~pP~y~-~~ 167 (359)
.=|=.+.+++.+.. .+|||+|++..+.+. .|
T Consensus 250 ~GGI~~~~da~~~l----~~GAd~V~ig~~~l~~~p 281 (314)
T 2e6f_A 250 CGGVYSGEDAFLHI----LAGASMVQVGTALQEEGP 281 (314)
T ss_dssp ESSCCSHHHHHHHH----HHTCSSEEECHHHHHHCT
T ss_pred ECCCCCHHHHHHHH----HcCCCEEEEchhhHhcCc
Confidence 55545677777766 369999999888664 44
No 75
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=94.39 E-value=0.081 Score=50.67 Aligned_cols=91 Identities=16% Similarity=0.226 Sum_probs=57.5
Q ss_pred HHHHHHHHCCCCEEEEccCcc------------------CcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHH
Q 018253 83 DLVNMQIVNGAEGMIVGGTTG------------------EGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIH 144 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstG------------------E~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~ 144 (359)
..++.+.+.|+++|.+.++.| ....++..+. +..+.+.+ +++|||+.=|=.+.+++.+
T Consensus 193 ~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~---l~~v~~~~-~~ipvia~GGI~~~~d~~k 268 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAAS---LAEIRSEF-PASTMIASGGLQDALDVAK 268 (349)
T ss_dssp HHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHH---HHHHHHHC-TTSEEEEESSCCSHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHH---HHHHHHhc-CCCeEEEECCCCCHHHHHH
Confidence 345677789999999976544 1234555443 33444444 5799998655556777766
Q ss_pred HHHHHHhCCCCEEEEcCCCCCCC---CHHHHHHHHHHHHh
Q 018253 145 ATEQGFAVGMHAALHINPYYGKT---SLEGLISHFDSVLS 181 (359)
Q Consensus 145 la~~a~~~Gadav~v~pP~y~~~---s~~~l~~yf~~Ia~ 181 (359)
... +|||+|++-.|+++.. .++++.++++.+.+
T Consensus 269 ~l~----~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~ 304 (349)
T 1p0k_A 269 AIA----LGASCTGMAGHFLKALTDSGEEGLLEEIQLILE 304 (349)
T ss_dssp HHH----TTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH----cCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 543 7999999999877642 33455555555544
No 76
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=94.33 E-value=0.57 Score=45.20 Aligned_cols=127 Identities=11% Similarity=-0.018 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccC----c-----------CCCCHHHHHHH----HHHHHHhhCCCcEEEE--ecC--
Q 018253 79 EAYDDLVNMQIVNGAEGMIVGGTTGE----G-----------QLMSWDEHIML----IGHTVNCFGASVKVIG--NTG-- 135 (359)
Q Consensus 79 ~~l~~li~~li~~Gv~Gl~v~GstGE----~-----------~~LT~~Er~~l----i~~~v~~~~grvpVia--gvg-- 135 (359)
+.+.+-.+...++|.|||=+.+..|- | +-=|.+.|.++ ++.+++.++.+ ||.+ ...
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-~v~vrls~~~~ 239 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD-RIGIRVSPIGT 239 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-GEEEEECCSSC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-cEEEEEccccc
Confidence 45566666677899999999886541 1 12245667554 55555556545 7777 221
Q ss_pred -------CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC-CCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHH
Q 018253 136 -------SNSTREAIHATEQGFAVGMHAALHINPYYGK-TSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHT 205 (359)
Q Consensus 136 -------~~st~~ai~la~~a~~~Gadav~v~pP~y~~-~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~ 205 (359)
..+.++++++++.+++.|+|.+-+..+.+.. +. .-.++.+.|.+. .||+.= -| ++++..++
T Consensus 240 ~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~--~~~~~~~~v~~~~~iPvi~~-----Gg--it~~~a~~ 310 (364)
T 1vyr_A 240 FQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKP--YSEAFRQKVRERFHGVIIGA-----GA--YTAEKAED 310 (364)
T ss_dssp BTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC--CCHHHHHHHHHHCCSEEEEE-----SS--CCHHHHHH
T ss_pred cccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCc--ccHHHHHHHHHHCCCCEEEE-----CC--cCHHHHHH
Confidence 2267789999999999999999998754321 11 012455566655 465532 23 48998888
Q ss_pred HhcC--CCeEEE
Q 018253 206 MAQS--PNLAGV 215 (359)
Q Consensus 206 La~~--pnivGi 215 (359)
+.+. -.+|++
T Consensus 311 ~l~~g~aD~V~~ 322 (364)
T 1vyr_A 311 LIGKGLIDAVAF 322 (364)
T ss_dssp HHHTTSCSEEEE
T ss_pred HHHCCCccEEEE
Confidence 8753 344444
No 77
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=94.16 E-value=0.37 Score=46.85 Aligned_cols=128 Identities=10% Similarity=0.023 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCcc----------------CcCCCCHHHHHHH----HHHHHHhhCCCcEEEEecCC--
Q 018253 79 EAYDDLVNMQIVNGAEGMIVGGTTG----------------EGQLMSWDEHIML----IGHTVNCFGASVKVIGNTGS-- 136 (359)
Q Consensus 79 ~~l~~li~~li~~Gv~Gl~v~GstG----------------E~~~LT~~Er~~l----i~~~v~~~~grvpViagvg~-- 136 (359)
+.+.+-.+...++|.|||=+.+..| |+- =|.+.|.++ ++.+++.++.+ ||.+=++.
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yG-GslenR~r~~~eiv~aVr~avg~~-~v~vrls~~~ 243 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYG-GSIENRARFPLEVVDAVAEVFGPE-RVGIRLTPFL 243 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccC-cchhhchHHHHHHHHHHHHHcCCC-cEEEEecccc
Confidence 4555556666789999999987643 222 246677554 55555566545 77775432
Q ss_pred --------CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 137 --------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 137 --------~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
.+.++++++++.+++.|+|++-+..+.+.......-.++.+.|.+. .||+. + .| ++++...++
T Consensus 244 ~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~-~----Gg--i~~~~a~~~ 316 (377)
T 2r14_A 244 ELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIY-C----GN--YDAGRAQAR 316 (377)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEE-E----SS--CCHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEE-E----CC--CCHHHHHHH
Confidence 3578899999999999999999987654211000012344555554 46654 2 23 468888887
Q ss_pred hcC--CCeEEE
Q 018253 207 AQS--PNLAGV 215 (359)
Q Consensus 207 a~~--pnivGi 215 (359)
.+. -.+|++
T Consensus 317 l~~g~aD~V~i 327 (377)
T 2r14_A 317 LDDNTADAVAF 327 (377)
T ss_dssp HHTTSCSEEEE
T ss_pred HHCCCceEEee
Confidence 643 344444
No 78
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=94.16 E-value=0.49 Score=43.78 Aligned_cols=131 Identities=14% Similarity=0.149 Sum_probs=83.4
Q ss_pred HHHHHHHHHHCCCCEEEEccCcc-CcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTG-EGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstG-E~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v 159 (359)
.+.+++.+-+.||+..++.++.. +...-+.+ .+++. ++..++|+--++|+--...+++++..+++.+.|+.++-+
T Consensus 49 ~e~~l~~md~~GV~~~V~~~~~~~~~~~~~N~---~~~~~-~~~~p~r~~~~~~v~p~~~~~a~~eL~~~~~~g~~Gi~~ 124 (291)
T 3irs_A 49 LELMFEEMAAAGIEQGVCVGRNSSVLGSVSNA---DVAAV-AKAYPDKFHPVGSIEAATRKEAMAQMQEILDLGIRIVNL 124 (291)
T ss_dssp HHHHHHHHHHTTCCEEEEECCEETTTEECCHH---HHHHH-HHHSTTTEEEEEECCCSSHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHCCCCEEEEcCCCccccccccHH---HHHHH-HHHCCCcEEEEEecCccCHHHHHHHHHHHHhCCCeEEEE
Confidence 45567777789999988888764 21112233 34433 334566776677776555677777777788999999988
Q ss_pred cCCCC---CCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCC--C-CHHHHHHHh-cCCCeEEEe
Q 018253 160 INPYY---GKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQD--I-PPRVIHTMA-QSPNLAGVK 216 (359)
Q Consensus 160 ~pP~y---~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~--l-s~e~l~~La-~~pnivGiK 216 (359)
.+-++ ...+.+.+...|+...+. +||+++--.. .|-. . .+..+.+++ ++|++..+=
T Consensus 125 ~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~-~~~~~~~~~p~~~~~v~~~~P~l~ivl 188 (291)
T 3irs_A 125 EPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGN-AGPDITYTNPEHIDRVLGDFPDLTVVS 188 (291)
T ss_dssp CGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSS-CSSSGGGGCHHHHHHHHHHCTTCCEEE
T ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCC-CCCCCccCCHHHHHHHHHHCCCCEEEe
Confidence 74332 123556778888877776 8999996432 1111 1 245666766 688765443
No 79
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=94.02 E-value=0.57 Score=44.61 Aligned_cols=129 Identities=9% Similarity=-0.028 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccC---------------cCCCCHHHHH----HHHHHHHHhhCCCcEEEEecC----
Q 018253 79 EAYDDLVNMQIVNGAEGMIVGGTTGE---------------GQLMSWDEHI----MLIGHTVNCFGASVKVIGNTG---- 135 (359)
Q Consensus 79 ~~l~~li~~li~~Gv~Gl~v~GstGE---------------~~~LT~~Er~----~li~~~v~~~~grvpViagvg---- 135 (359)
+.+.+-.+...++|.|||=+.+..|- .+-=|.+.|. ++++.+++.+ +.||.+=++
T Consensus 144 ~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v--~~pv~vris~~~~ 221 (338)
T 1z41_A 144 QEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW--DGPLFVRVSASDY 221 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc--CCcEEEEecCccc
Confidence 34555556667899999988876541 0112456674 4555555555 567776543
Q ss_pred ---CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC---CC-HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 136 ---SNSTREAIHATEQGFAVGMHAALHINPYYGK---TS-LEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 136 ---~~st~~ai~la~~a~~~Gadav~v~pP~y~~---~s-~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
+.+.++++++++.+++.|+|++-+....+.. +. +..-.++.+.|.+. .||+. .|---+++...++
T Consensus 222 ~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~------~Ggi~s~~~a~~~ 295 (338)
T 1z41_A 222 TDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGA------VGMITDGSMAEEI 295 (338)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEE------CSSCCSHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEE------ECCCCCHHHHHHH
Confidence 3568899999999999999999987654321 11 11123444555544 56653 2322368888877
Q ss_pred hcC--CCeEEE
Q 018253 207 AQS--PNLAGV 215 (359)
Q Consensus 207 a~~--pnivGi 215 (359)
.+. -..|++
T Consensus 296 l~~G~aD~V~i 306 (338)
T 1z41_A 296 LQNGRADLIFI 306 (338)
T ss_dssp HHTTSCSEEEE
T ss_pred HHcCCceEEee
Confidence 643 344444
No 80
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=93.96 E-value=0.18 Score=45.54 Aligned_cols=93 Identities=15% Similarity=0.170 Sum_probs=65.3
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHH--------------------------HHHHHHCCCCEEEEccCccCcCCCCHHH
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDL--------------------------VNMQIVNGAEGMIVGGTTGEGQLMSWDE 112 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~l--------------------------i~~li~~Gv~Gl~v~GstGE~~~LT~~E 112 (359)
-.|.=-.++=.+++||+||.+.++++ +++|++.|++-|+.-|.. .+-+..|
T Consensus 87 ~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG~~---~~~~a~~ 163 (224)
T 2bdq_A 87 ELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSS---NGEPIIE 163 (224)
T ss_dssp HTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCS---SCCCGGG
T ss_pred HcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCCCC---CCCcHHH
Confidence 34444444555567999999998877 456889999999955544 3345777
Q ss_pred HHHHHHHHHHhhCCCcEEEEecC--CCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 113 HIMLIGHTVNCFGASVKVIGNTG--SNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 113 r~~li~~~v~~~~grvpViagvg--~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
-...++..++.+++|+.|++|-| ..+..+- .++.|++.+-..
T Consensus 164 g~~~L~~Lv~~a~~ri~Im~GgGV~~~Ni~~l------~~~tGv~e~H~s 207 (224)
T 2bdq_A 164 NIKHIKALVEYANNRIEIMVGGGVTAENYQYI------CQETGVKQAHGT 207 (224)
T ss_dssp GHHHHHHHHHHHTTSSEEEECSSCCTTTHHHH------HHHHTCCEEEET
T ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCHHHHHHH------HHhhCCCEEccc
Confidence 78888888888889999999654 4444432 234588877654
No 81
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=93.85 E-value=0.18 Score=46.78 Aligned_cols=124 Identities=14% Similarity=0.105 Sum_probs=84.9
Q ss_pred eecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC--------
Q 018253 66 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN-------- 137 (359)
Q Consensus 66 l~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~-------- 137 (359)
.=|||-.- . +.+...+.+.++++.|++++-+=|. +|..+.++.+++ .++||+.++|-+
T Consensus 83 aD~pfgsy-~-~~~~a~~~a~rl~kaGa~aVklEgg---------~e~~~~I~al~~---agipV~gHiGLtPq~v~~~g 148 (264)
T 1m3u_A 83 ADLPFMAY-A-TPEQAFENAATVMRAGANMVKIEGG---------EWLVETVQMLTE---RAVPVCGHLGLTPQSVNIFG 148 (264)
T ss_dssp EECCTTSS-S-SHHHHHHHHHHHHHTTCSEEECCCS---------GGGHHHHHHHHH---TTCCEEEEEESCGGGHHHHT
T ss_pred EECCCCCc-C-CHHHHHHHHHHHHHcCCCEEEECCc---------HHHHHHHHHHHH---CCCCeEeeecCCceeecccC
Confidence 66899533 3 7788888888999999999998776 355556665554 468988544311
Q ss_pred ----------CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-CCCCCCCCCHHHHH
Q 018253 138 ----------STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV-PSRTGQDIPPRVIH 204 (359)
Q Consensus 138 ----------st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~-P~~tg~~ls~e~l~ 204 (359)
..+++++.++.++++|||++++--. + . ++ .++|.++ .|++-.-. |...|+-|=...+.
T Consensus 149 gf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~v----p-~-~~---a~~it~~l~iP~igIGag~~~dgQvLV~~D~l 219 (264)
T 1m3u_A 149 GYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECV----P-V-EL---AKRITEALAIPVIGIGAGNVTDGQILVMHDAF 219 (264)
T ss_dssp SSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEESC----C-H-HH---HHHHHHHCSSCEEEESSCTTSSEEEECHHHHT
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEecC----C-H-HH---HHHHHHhCCCCEEEeCCCCCCCcceeeHHhhc
Confidence 2478999999999999999988542 2 2 33 3467665 68877654 55667766666565
Q ss_pred HHh-c-CCCe
Q 018253 205 TMA-Q-SPNL 212 (359)
Q Consensus 205 ~La-~-~pni 212 (359)
-|. + .|.+
T Consensus 220 G~~~~~~pkf 229 (264)
T 1m3u_A 220 GITGGHIPKF 229 (264)
T ss_dssp TCSCSSCCTT
T ss_pred CCCCCCCCCc
Confidence 554 2 4665
No 82
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=93.76 E-value=1.1 Score=41.37 Aligned_cols=179 Identities=13% Similarity=0.002 Sum_probs=104.5
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCc----------------CCCCHHHHHHHHHHHHHh
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG----------------QLMSWDEHIMLIGHTVNC 123 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~----------------~~LT~~Er~~li~~~v~~ 123 (359)
++.+.+.+||= .-|++...+.++.|.+. +|.|-++...++- .-+|.+.-.++++.+.+.
T Consensus 15 ~~~li~~i~~G----dP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~ 89 (271)
T 1ujp_A 15 RAALIPYLTAG----FPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL 89 (271)
T ss_dssp BCEEEEEEETT----SSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEecCC----CCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 34556666664 46678888899988888 9999987655421 115556666777777766
Q ss_pred hCCCcEEEEecCCCCHH--HHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCH
Q 018253 124 FGASVKVIGNTGSNSTR--EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPP 200 (359)
Q Consensus 124 ~~grvpViagvg~~st~--~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~ 200 (359)
. ++||++=...+... ..-++++.+.++|+|++++.. . +.+++.+|.+.+-+. .+.+..=.| ..+.
T Consensus 90 ~--~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~D--l---~~ee~~~~~~~~~~~gl~~i~liap-----~s~~ 157 (271)
T 1ujp_A 90 T--EKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPD--L---PPDEDPGLVRLAQEIGLETVFLLAP-----TSTD 157 (271)
T ss_dssp C--CSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTT--C---CGGGCHHHHHHHHHHTCEEECEECT-----TCCH
T ss_pred C--CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecC--C---CHHHHHHHHHHHHHcCCceEEEeCC-----CCCH
Confidence 3 58988732222111 235778889999999887742 1 126677777766554 443332233 2456
Q ss_pred HHHHHHhc-CCCeEEEe---------ccCch--h----hHhhhhCCceEEEecC--C-chhhhhhhhcCCceeecccc
Q 018253 201 RVIHTMAQ-SPNLAGVK---------ECVGN--D----RVEHYTGNGIVVWSGN--D-DQCHDARWNHGATGVISVTS 259 (359)
Q Consensus 201 e~l~~La~-~pnivGiK---------~ss~d--~----~l~~~~~~~~~v~~G~--d-~~~~~~~l~~Ga~G~is~~a 259 (359)
+-++++++ ...++.+= ..... . ++++.. +..++.|. . ..-... + .|+||+|.|++
T Consensus 158 eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~-~-~~ADgVIVGSA 231 (271)
T 1ujp_A 158 ARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQ-A-AVADGVVVGSA 231 (271)
T ss_dssp HHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHH-H-TTSSEEEECHH
T ss_pred HHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHH-h-cCCCEEEEChH
Confidence 78888874 34444221 11110 1 223322 34455544 2 222333 6 89999998865
No 83
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=93.70 E-value=0.43 Score=44.67 Aligned_cols=100 Identities=14% Similarity=0.118 Sum_probs=71.8
Q ss_pred HHHHHHHHCCCCEEEEccCccCcC-----CCCHHHHHHHHHHHHHhhC-CCcEEEEecC---------CCCHHHHHHHHH
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFG-ASVKVIGNTG---------SNSTREAIHATE 147 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~-----~LT~~Er~~li~~~v~~~~-grvpViagvg---------~~st~~ai~la~ 147 (359)
+-++..+++|++.+-+..++.|.+ ..|.+|-.+.++.+++.+. ...+|.+.+. ..+.+..+++++
T Consensus 84 ~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (298)
T 2cw6_A 84 KGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTK 163 (298)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHH
T ss_pred HhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHH
Confidence 347778889999999999999874 5677777777777666543 2345544332 347888999999
Q ss_pred HHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC
Q 018253 148 QGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG 183 (359)
Q Consensus 148 ~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~ 183 (359)
.+.++|+|.+.+.-- ....+++++.+.++.+.+..
T Consensus 164 ~~~~~Ga~~i~l~DT-~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 164 KFYSMGCYEISLGDT-IGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp HHHHTTCSEEEEEET-TSCCCHHHHHHHHHHHHHHS
T ss_pred HHHHcCCCEEEecCC-CCCcCHHHHHHHHHHHHHhC
Confidence 999999998766533 34467788888888887653
No 84
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=93.68 E-value=0.27 Score=45.92 Aligned_cols=127 Identities=13% Similarity=0.111 Sum_probs=84.0
Q ss_pred EeeecCCCCCCCCCHHHHHHHHHHHHH-CCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC-----
Q 018253 64 TAIKTPYLPDGRFDLEAYDDLVNMQIV-NGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN----- 137 (359)
Q Consensus 64 ~al~TPF~~dg~ID~~~l~~li~~li~-~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~----- 137 (359)
...=|||- ....+.+...+.+.++++ .|++|+-+=|. +|..+.++.+++. ++||+.++|-.
T Consensus 98 vvaD~pfg-sy~~s~~~a~~na~rl~~eaGa~aVklEdg---------~e~~~~I~al~~a---gIpV~gHiGLtPqsv~ 164 (281)
T 1oy0_A 98 VVADLPFG-SYEAGPTAALAAATRFLKDGGAHAVKLEGG---------ERVAEQIACLTAA---GIPVMAHIGFTPQSVN 164 (281)
T ss_dssp EEEECCTT-SSTTCHHHHHHHHHHHHHTTCCSEEEEEBS---------GGGHHHHHHHHHH---TCCEEEEEECCC----
T ss_pred EEEECCCC-cccCCHHHHHHHHHHHHHHhCCeEEEECCc---------HHHHHHHHHHHHC---CCCEEeeecCCcceec
Confidence 33778884 334566666565566666 99999998776 3556666666553 58887543311
Q ss_pred ------------CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-CCCCCCCCCHHH
Q 018253 138 ------------STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV-PSRTGQDIPPRV 202 (359)
Q Consensus 138 ------------st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~-P~~tg~~ls~e~ 202 (359)
..+++++.++.++++|||++++--. + . ++ .++|.++ .|++-.-. |...|+-|=...
T Consensus 165 ~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~v----p-~-~~---a~~it~~l~iP~igIGaG~~~dgQvLV~~D 235 (281)
T 1oy0_A 165 TLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMV----P-A-EL---ATQITGKLTIPTVGIGAGPNCDGQVLVWQD 235 (281)
T ss_dssp ----------CHHHHHHHHHHHHHHHHTCSEEEEESC----C-H-HH---HHHHHHHCSSCEEEESSCSCSSEEEECHHH
T ss_pred ccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEecC----C-H-HH---HHHHHHhCCCCEEEeCCCCCCCcceeeHhh
Confidence 3478999999999999999988542 2 2 33 3467665 68887654 566677766666
Q ss_pred HHHHh-c-CCCe
Q 018253 203 IHTMA-Q-SPNL 212 (359)
Q Consensus 203 l~~La-~-~pni 212 (359)
+.-|. + .|.+
T Consensus 236 ~lG~~~~~~pkf 247 (281)
T 1oy0_A 236 MAGFSGAKTARF 247 (281)
T ss_dssp HTTCSCSCCCTT
T ss_pred hcCCCCCCCCCc
Confidence 66665 3 4666
No 85
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.65 E-value=2 Score=37.24 Aligned_cols=156 Identities=12% Similarity=0.017 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gad 155 (359)
.|.+...++++.+.+.|++.+-+.-.+. .-.+.++.+.+..+.+.++-+|+. .+.+ .++.|.+.|||
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~~--------~~~~~i~~ir~~~~~~~~ig~~~v-~~~~----~~~~a~~~Gad 85 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTVP--------DADTVIKELSFLKEKGAIIGAGTV-TSVE----QCRKAVESGAE 85 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTST--------THHHHHHHTHHHHHTTCEEEEESC-CSHH----HHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCh--------hHHHHHHHHHHHCCCCcEEEeccc-CCHH----HHHHHHHcCCC
Confidence 3677899999999999999986654432 123456666665543444444332 3443 46777889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEeccCch----hhHhhhhC--
Q 018253 156 AALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECVGN----DRVEHYTG-- 229 (359)
Q Consensus 156 av~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK~ss~d----~~l~~~~~-- 229 (359)
.+ + .|.+. .+++++.++. ..|++. |+ .+++.+.+..+. .+-.+|....+ ..+.+...
T Consensus 86 ~i-v-~~~~~----~~~~~~~~~~--g~~vi~-------g~-~t~~e~~~a~~~-Gad~vk~~~~~~~g~~~~~~l~~~~ 148 (205)
T 1wa3_A 86 FI-V-SPHLD----EEISQFCKEK--GVFYMP-------GV-MTPTELVKAMKL-GHTILKLFPGEVVGPQFVKAMKGPF 148 (205)
T ss_dssp EE-E-CSSCC----HHHHHHHHHH--TCEEEC-------EE-CSHHHHHHHHHT-TCCEEEETTHHHHHHHHHHHHHTTC
T ss_pred EE-E-cCCCC----HHHHHHHHHc--CCcEEC-------Cc-CCHHHHHHHHHc-CCCEEEEcCccccCHHHHHHHHHhC
Confidence 99 4 45542 4455544431 257653 22 355555554432 23345543222 12222221
Q ss_pred CceEEEe--cCCchhhhhhhhcCCceeecccccc
Q 018253 230 NGIVVWS--GNDDQCHDARWNHGATGVISVTSNL 261 (359)
Q Consensus 230 ~~~~v~~--G~d~~~~~~~l~~Ga~G~is~~an~ 261 (359)
+++.++. |-...-....+..|++|+..|.+.+
T Consensus 149 ~~~pvia~GGI~~~~~~~~~~~Ga~~v~vGs~i~ 182 (205)
T 1wa3_A 149 PNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALV 182 (205)
T ss_dssp TTCEEEEBSSCCTTTHHHHHHHTCSCEEECHHHH
T ss_pred CCCcEEEcCCCCHHHHHHHHHCCCCEEEECcccc
Confidence 1444433 4433334456789999999886544
No 86
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=93.63 E-value=0.87 Score=42.11 Aligned_cols=121 Identities=12% Similarity=0.098 Sum_probs=86.1
Q ss_pred ceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccC-------cCCCCHHHHHHHHHHHHHhhCCCcEEEEe
Q 018253 61 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGE-------GQLMSWDEHIMLIGHTVNCFGASVKVIGN 133 (359)
Q Consensus 61 Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE-------~~~LT~~Er~~li~~~v~~~~grvpViag 133 (359)
|=--.++|.+| ....++++ ++|++.+++..|.|- .-.+|.+|-..-.+.+++.+ .+.+|++-
T Consensus 16 g~~i~~~tayD-------~~sA~l~e---~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~-~~~~vvaD 84 (264)
T 1m3u_A 16 KKRFATITAYD-------YSFAKLFA---DEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGA-PNCLLLAD 84 (264)
T ss_dssp TCCEEEEECCS-------HHHHHHHH---HHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-TTSEEEEE
T ss_pred CCcEEEEeCcC-------HHHHHHHH---HcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhC-CCCcEEEE
Confidence 33345788886 45556655 579999999656552 24678999888888877765 35677876
Q ss_pred cCCC---CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 134 TGSN---STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 134 vg~~---st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
.... |.+++++.++...+.||++|-+-- ++++.+-.+.+.++ .|++=+ ..|+|..+..+
T Consensus 85 ~pfgsy~~~~~a~~~a~rl~kaGa~aVklEg-------g~e~~~~I~al~~agipV~gH-------iGLtPq~v~~~ 147 (264)
T 1m3u_A 85 LPFMAYATPEQAFENAATVMRAGANMVKIEG-------GEWLVETVQMLTERAVPVCGH-------LGLTPQSVNIF 147 (264)
T ss_dssp CCTTSSSSHHHHHHHHHHHHHTTCSEEECCC-------SGGGHHHHHHHHHTTCCEEEE-------EESCGGGHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCCEEEECC-------cHHHHHHHHHHHHCCCCeEee-------ecCCceeeccc
Confidence 5433 899999999999999999998763 35677888888887 688744 23555555544
No 87
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=93.57 E-value=0.21 Score=46.08 Aligned_cols=90 Identities=12% Similarity=0.080 Sum_probs=63.5
Q ss_pred HHHHHHHHCCCCEEEEccC-ccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 83 DLVNMQIVNGAEGMIVGGT-TGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~Gs-tGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
.+.+++.+.|++.+...|+ .|-+..++. .++++.+++. .++|||+.-|=.+.+++ ..|.++|+|+|++-.
T Consensus 147 ~~akrl~~~G~~aVmPlg~pIGsG~Gi~~---~~lI~~I~e~--~~vPVI~eGGI~TPsDA----a~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 147 IIARQLAEIGCIAVMPLAGLIGSGLGICN---PYNLRIILEE--AKVPVLVDAGVGTASDA----AIAMELGCEAVLMNT 217 (265)
T ss_dssp HHHHHHHHSCCSEEEECSSSTTCCCCCSC---HHHHHHHHHH--CSSCBEEESCCCSHHHH----HHHHHHTCSEEEESH
T ss_pred HHHHHHHHhCCCEEEeCCccCCCCCCcCC---HHHHHHHHhc--CCCCEEEeCCCCCHHHH----HHHHHcCCCEEEECh
Confidence 3456777899999999776 555656654 4556676763 47999997665566654 456668999999987
Q ss_pred CCCCCCCHHHHHHHHHHHHh
Q 018253 162 PYYGKTSLEGLISHFDSVLS 181 (359)
Q Consensus 162 P~y~~~s~~~l~~yf~~Ia~ 181 (359)
-.....++..+.+.|..-.+
T Consensus 218 AI~~a~dP~~ma~af~~Av~ 237 (265)
T 1wv2_A 218 AIAHAKDPVMMAEAMKHAIV 237 (265)
T ss_dssp HHHTSSSHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHH
Confidence 66655667777777766543
No 88
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=93.43 E-value=0.31 Score=46.67 Aligned_cols=101 Identities=11% Similarity=0.028 Sum_probs=81.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~G 153 (359)
.+.|.+.+.++++.+.+.|++-|.+.+|+|-. ++++-.++++.+.+.+++++|+-++. +++.--++..+..|.++|
T Consensus 144 ~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~---~P~~v~~lv~~l~~~~~~~~pi~~H~-Hn~~G~avAn~laA~~aG 219 (345)
T 1nvm_A 144 HMIPAEKLAEQGKLMESYGATCIYMADSGGAM---SMNDIRDRMRAFKAVLKPETQVGMHA-HHNLSLGVANSIVAVEEG 219 (345)
T ss_dssp TSSCHHHHHHHHHHHHHHTCSEEEEECTTCCC---CHHHHHHHHHHHHHHSCTTSEEEEEC-BCTTSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCcCcc---CHHHHHHHHHHHHHhcCCCceEEEEE-CCCccHHHHHHHHHHHcC
Confidence 36789999999999999999999999999985 69999999999999886568887765 567788899999999999
Q ss_pred CCEEEEcCCCCC----CCCHHHHHHHHHH
Q 018253 154 MHAALHINPYYG----KTSLEGLISHFDS 178 (359)
Q Consensus 154 adav~v~pP~y~----~~s~~~l~~yf~~ 178 (359)
|+.+=..---+. .++-++++..++.
T Consensus 220 a~~vd~tv~GlG~~aGN~~le~lv~~L~~ 248 (345)
T 1nvm_A 220 CDRVDASLAGMGAGAGNAPLEVFIAVAER 248 (345)
T ss_dssp CCEEEEBGGGCSSTTCBCBHHHHHHHHHH
T ss_pred CCEEEecchhccCCccCcCHHHHHHHHHh
Confidence 998866533232 2455666666654
No 89
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=93.42 E-value=4.8 Score=37.17 Aligned_cols=175 Identities=14% Similarity=0.074 Sum_probs=100.6
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEccCccC----c------------CCCCHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018253 72 PDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGE----G------------QLMSWDEHIMLIGHTVNCFGASVKVIGNTG 135 (359)
Q Consensus 72 ~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE----~------------~~LT~~Er~~li~~~v~~~~grvpViagvg 135 (359)
--|.-|++...++++.|.+.|+|.|=++=-.++ + .-+|.+.-.++++.+.+. ..++|+++=..
T Consensus 27 ~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~-~~~~Pivlm~Y 105 (271)
T 3nav_A 27 TIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRAR-NPETPIGLLMY 105 (271)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-CTTSCEEEEEC
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCCEEEEec
Confidence 356788999999999999999998776532211 1 114555556666666654 13689876444
Q ss_pred CCCHHH--HHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCC
Q 018253 136 SNSTRE--AIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPN 211 (359)
Q Consensus 136 ~~st~~--ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~-~pn 211 (359)
.+.... .-++++.++++|+|++++. -. ..++..+|.+...+. +..+..=.|. -+.+.++++++ .+.
T Consensus 106 ~n~v~~~g~~~f~~~~~~aGvdGvIip--Dl---p~ee~~~~~~~~~~~gl~~I~lvap~-----t~~eri~~i~~~~~g 175 (271)
T 3nav_A 106 ANLVYARGIDDFYQRCQKAGVDSVLIA--DV---PTNESQPFVAAAEKFGIQPIFIAPPT-----ASDETLRAVAQLGKG 175 (271)
T ss_dssp HHHHHHTCHHHHHHHHHHHTCCEEEET--TS---CGGGCHHHHHHHHHTTCEEEEEECTT-----CCHHHHHHHHHHCCS
T ss_pred CcHHHHHhHHHHHHHHHHCCCCEEEEC--CC---CHHHHHHHHHHHHHcCCeEEEEECCC-----CCHHHHHHHHHHCCC
Confidence 333222 3678999999999998883 22 225555555544444 3333222332 34678888874 445
Q ss_pred eEEE---------eccCch--h----hHhhhhCCceEEEecCCc---hhhhhhhhcCCceeecccc
Q 018253 212 LAGV---------KECVGN--D----RVEHYTGNGIVVWSGNDD---QCHDARWNHGATGVISVTS 259 (359)
Q Consensus 212 ivGi---------K~ss~d--~----~l~~~~~~~~~v~~G~d~---~~~~~~l~~Ga~G~is~~a 259 (359)
++++ +..... . ++++.. +.-+..|..- .-....+..|+||+|.|++
T Consensus 176 fiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSA 239 (271)
T 3nav_A 176 YTYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGAISGSA 239 (271)
T ss_dssp CEEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred eEEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 5543 211111 1 223333 3445555431 1222246789999999865
No 90
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=93.41 E-value=0.23 Score=44.72 Aligned_cols=88 Identities=16% Similarity=0.194 Sum_probs=57.1
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
...++.+.+.|++++++.+.+-++..... -.++++.+.+.+ ++|||++=|-.+.+++.++. +.|+|++++..
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~--~~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~----~~Gadgv~vgs 226 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEGY--DLRLTRMVAEAV--GVPVIASGGAGRMEHFLEAF----QAGAEAALAAS 226 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSCC--CHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHH----HTTCSEEEESH
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCCC--CHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHH----HCCCHHHHHHH
Confidence 33455566789999998864433222221 144555555554 68999976655566665543 47999999998
Q ss_pred CCCCCC-CHHHHHHHHH
Q 018253 162 PYYGKT-SLEGLISHFD 177 (359)
Q Consensus 162 P~y~~~-s~~~l~~yf~ 177 (359)
-.+..+ +.+++.++.+
T Consensus 227 al~~~~~~~~~~~~~l~ 243 (252)
T 1ka9_F 227 VFHFGEIPIPKLKRYLA 243 (252)
T ss_dssp HHHTTSSCHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHH
Confidence 777664 7788777654
No 91
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=93.26 E-value=1.3 Score=45.93 Aligned_cols=130 Identities=11% Similarity=0.074 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccC----c-----------CCCCHHHH----HHHHHHHHHhhCCCcEEEEec------
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGE----G-----------QLMSWDEH----IMLIGHTVNCFGASVKVIGNT------ 134 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE----~-----------~~LT~~Er----~~li~~~v~~~~grvpViagv------ 134 (359)
.+.+-.....++|.|||=+.+..|- | +-=|.+.| .++++.+++.++.+.||.+=+
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~ 221 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLV 221 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccC
Confidence 4444455556799999999877641 1 12245667 556666666777778886622
Q ss_pred -CCCCHHHHHHHHHHHHhCCCCEEEEcC----CCC---CCCCH-HHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHH
Q 018253 135 -GSNSTREAIHATEQGFAVGMHAALHIN----PYY---GKTSL-EGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVI 203 (359)
Q Consensus 135 -g~~st~~ai~la~~a~~~Gadav~v~p----P~y---~~~s~-~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l 203 (359)
++.+.++++++++.+++.|+|++-+.. |.+ ..... .....+.+.|.+. .||+. .|--.+++..
T Consensus 222 ~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~------~Ggi~~~~~a 295 (671)
T 1ps9_A 222 EDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVT------TNRINDPQVA 295 (671)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEE------CSSCCSHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEE------eCCCCCHHHH
Confidence 245789999999999999999997741 111 11111 1224566667665 57764 2333478888
Q ss_pred HHHhcC--CCeEEE
Q 018253 204 HTMAQS--PNLAGV 215 (359)
Q Consensus 204 ~~La~~--pnivGi 215 (359)
.++.+. -..|++
T Consensus 296 ~~~l~~g~aD~V~~ 309 (671)
T 1ps9_A 296 DDILSRGDADMVSM 309 (671)
T ss_dssp HHHHHTTSCSEEEE
T ss_pred HHHHHcCCCCEEEe
Confidence 887643 344443
No 92
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=93.24 E-value=0.39 Score=46.34 Aligned_cols=127 Identities=13% Similarity=0.004 Sum_probs=76.2
Q ss_pred CCCHHHHHHHHHHH-------HHCCCCEEEEccCcc----------------CcCCCCHHHHHHHHHHH----HHhhCCC
Q 018253 75 RFDLEAYDDLVNMQ-------IVNGAEGMIVGGTTG----------------EGQLMSWDEHIMLIGHT----VNCFGAS 127 (359)
Q Consensus 75 ~ID~~~l~~li~~l-------i~~Gv~Gl~v~GstG----------------E~~~LT~~Er~~li~~~----v~~~~gr 127 (359)
.++.+.++++++.. .++|.|||=+.+..| |+- =|.+.|.+++..+ ++.++.+
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yG-GslenR~r~~~eiv~aVr~avg~d 225 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYG-GSFDNRSRFLLETLAAVREVWPEN 225 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccC-cCHHHHHHHHHHHHHHHHHHcCCC
Confidence 36666666666554 468999999988643 221 2567776554444 4445556
Q ss_pred cEEEEecCC--------CCHHHHHHHHHHHHhCCCCEEEEcCCCCCC----C-CHHHHHHHHHHHHhc--CCeEEEeCCC
Q 018253 128 VKVIGNTGS--------NSTREAIHATEQGFAVGMHAALHINPYYGK----T-SLEGLISHFDSVLSM--GPTIIYNVPS 192 (359)
Q Consensus 128 vpViagvg~--------~st~~ai~la~~a~~~Gadav~v~pP~y~~----~-s~~~l~~yf~~Ia~a--~PiiiYn~P~ 192 (359)
.||.+=++. .+.++++++++..++.|+|.+-+....+.. + .+..-..+.+.|.+. .||+.
T Consensus 226 ~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~----- 300 (363)
T 3l5l_A 226 LPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTS----- 300 (363)
T ss_dssp SCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEE-----
T ss_pred ceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEE-----
Confidence 677764432 567899999999999999999887543221 0 111113344444443 57653
Q ss_pred CCCCCCCHHHHHHHhc
Q 018253 193 RTGQDIPPRVIHTMAQ 208 (359)
Q Consensus 193 ~tg~~ls~e~l~~La~ 208 (359)
.|---+++...++.+
T Consensus 301 -~GgI~s~e~a~~~l~ 315 (363)
T 3l5l_A 301 -AWGFGTPQLAEAALQ 315 (363)
T ss_dssp -CSSTTSHHHHHHHHH
T ss_pred -eCCCCCHHHHHHHHH
Confidence 232235777776653
No 93
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=93.22 E-value=1.2 Score=41.41 Aligned_cols=120 Identities=10% Similarity=0.104 Sum_probs=84.6
Q ss_pred cCCcccc---cCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcc-------CcCCCCHHHHHHHHHHH
Q 018253 51 RTSAEDI---KALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTG-------EGQLMSWDEHIMLIGHT 120 (359)
Q Consensus 51 ~~~~~~~---~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstG-------E~~~LT~~Er~~li~~~ 120 (359)
++++.++ +-.|=--.++|.+| ....++++ ++|++.+++..|.| -.-.+|.+|-..-++.+
T Consensus 15 ~~t~~~lr~~~~~g~~i~m~tayD-------a~sA~l~e---~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV 84 (275)
T 3vav_A 15 AVTVPKLQAMREAGEKIAMLTCYD-------ASFAALLD---RANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACV 84 (275)
T ss_dssp CCCHHHHHHHHHHTCCEEEEECCS-------HHHHHHHH---HTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHCCCcEEEEeCcC-------HHHHHHHH---HcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHH
Confidence 3444443 23344456788886 34455544 68999998876765 22368999988888887
Q ss_pred HHhhCCCcEEEEecCC---CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEE
Q 018253 121 VNCFGASVKVIGNTGS---NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIY 188 (359)
Q Consensus 121 v~~~~grvpViagvg~---~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiY 188 (359)
++.+ .+.||++-.-. .+.+++++.++...+.||++|-+-- +.+..+..+.|.++ .|++-+
T Consensus 85 ~r~~-~~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEd-------g~~~~~~i~~l~~~GIpv~gH 148 (275)
T 3vav_A 85 ARAQ-PRALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEG-------GEWLAETVRFLVERAVPVCAH 148 (275)
T ss_dssp HHTC-CSSEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEEC-------CGGGHHHHHHHHHTTCCEEEE
T ss_pred HhcC-CCCCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECC-------chhHHHHHHHHHHCCCCEEEe
Confidence 7754 46899996532 5889999999999889999998863 23456667777777 688864
No 94
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=93.19 E-value=0.13 Score=49.76 Aligned_cols=94 Identities=15% Similarity=0.185 Sum_probs=60.5
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
..++.+.+.|+++|.+.++.|-...-. .-..+.+..+.+.+.+++|||+.=|=.+..++.+... +|||+|++-.|
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~-~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~----~GAdaV~iGr~ 311 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYV-PATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALA----LGAAGVFIGRP 311 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTC-CCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHH----HTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCc-ccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHH----cCCCEEeecHH
Confidence 345778899999999976555311111 1234555666677777899997444445666665543 79999999999
Q ss_pred CCCCC---CHHHHHHHHHHHHh
Q 018253 163 YYGKT---SLEGLISHFDSVLS 181 (359)
Q Consensus 163 ~y~~~---s~~~l~~yf~~Ia~ 181 (359)
+++.. .++++.++++.+.+
T Consensus 312 ~l~~~~~~G~~gv~~~~~~l~~ 333 (370)
T 1gox_A 312 VVFSLAAEGEAGVKKVLQMMRD 333 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHH
Confidence 87642 34555566555544
No 95
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.13 E-value=0.26 Score=46.17 Aligned_cols=91 Identities=16% Similarity=0.130 Sum_probs=63.0
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHH------------------------HHHHHCCCCEEEEccCccCcCCCCHHHHH
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLV------------------------NMQIVNGAEGMIVGGTTGEGQLMSWDEHI 114 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li------------------------~~li~~Gv~Gl~v~GstGE~~~LT~~Er~ 114 (359)
-.|.=-.++=-+++||+||.+.+++++ +++++.|++-|+.-|.. -+..|..
T Consensus 122 ~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~-----~~a~~Gl 196 (287)
T 3iwp_A 122 LYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCD-----SSALEGL 196 (287)
T ss_dssp HTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTS-----SSTTTTH
T ss_pred HcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCC-----CChHHhH
Confidence 344444445555679999999988875 55677799999987752 2235788
Q ss_pred HHHHHHHHhhCCCcEEEEecC--CCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 115 MLIGHTVNCFGASVKVIGNTG--SNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 115 ~li~~~v~~~~grvpViagvg--~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
..++..++.++++++|++|-| ..+..+.+ +..|++.+-..
T Consensus 197 ~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~------~~tG~~~~H~S 238 (287)
T 3iwp_A 197 PLIKRLIEQAKGRIVVMPGGGITDRNLQRIL------EGSGATEFHCS 238 (287)
T ss_dssp HHHHHHHHHHTTSSEEEECTTCCTTTHHHHH------HHHCCSEEEEC
T ss_pred HHHHHHHHHhCCCCEEEECCCcCHHHHHHHH------HhhCCCEEeEC
Confidence 888888888899999999744 43443332 23688877554
No 96
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=93.11 E-value=0.71 Score=43.48 Aligned_cols=167 Identities=14% Similarity=0.114 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHH--HhhCCCcEEEEecCCCC-H-----HH-HH---HH
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTV--NCFGASVKVIGNTGSNS-T-----RE-AI---HA 145 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v--~~~~grvpViagvg~~s-t-----~~-ai---~l 145 (359)
++.+++++...++.|++||++-...|+ ..+. .....++++|++..+.+ . .+ .+ .-
T Consensus 47 l~~~k~lv~~~~~~~~~avl~~~g~~~-------------~a~~~~~~~~~~~glil~l~~~~~l~~~~~~~~l~~~~~~ 113 (304)
T 1to3_A 47 LTDFKVNAAKILSPYASAVLLDQQFCY-------------RQAVEQNAVAKSCAMIVAADDFIPGNGIPVDNVVLDKKIN 113 (304)
T ss_dssp HHHHHHHHHHHHGGGCSEEEECTTTTH-------------HHHHHTTCSCTTSEEEEECEEEEEETTEEEEEEEECSSCC
T ss_pred hhhHHHHHHHHHhcCCCEEEeCHHHHH-------------HHhhcccccCCCCcEEEEECCCCCCCCCccchhhccCchh
Confidence 578999999999999999998777776 1111 12455689988874311 1 11 33 56
Q ss_pred HHHHHhCCCCEEEEcCCCCCCC-CHHHHHHHHHHHHhc-----CCeEEEeCCC--CCCCCCCH-HHHHHH---h-cC-CC
Q 018253 146 TEQGFAVGMHAALHINPYYGKT-SLEGLISHFDSVLSM-----GPTIIYNVPS--RTGQDIPP-RVIHTM---A-QS-PN 211 (359)
Q Consensus 146 a~~a~~~Gadav~v~pP~y~~~-s~~~l~~yf~~Ia~a-----~PiiiYn~P~--~tg~~ls~-e~l~~L---a-~~-pn 211 (359)
+++|.++|||+|-++- ||.+. ++.+.++..+++.+. +|+++-=+|. ..+.+-++ +.+.+- + +. ..
T Consensus 114 ve~a~~~GAdaV~vlv-~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD 192 (304)
T 1to3_A 114 AQAVKRDGAKALKLLV-LWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGAD 192 (304)
T ss_dssp HHHHHHTTCCEEEEEE-EECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCS
T ss_pred HHHHHHcCCCEEEEEE-EcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCC
Confidence 7788889999997653 23222 356677777777653 5876554432 22333455 555542 2 33 35
Q ss_pred eEEEeccC---ch-h---hHhhh----hCCceEEEecCCch-----hhhhhhhcCCceeeccc
Q 018253 212 LAGVKECV---GN-D---RVEHY----TGNGIVVWSGNDDQ-----CHDARWNHGATGVISVT 258 (359)
Q Consensus 212 ivGiK~ss---~d-~---~l~~~----~~~~~~v~~G~d~~-----~~~~~l~~Ga~G~is~~ 258 (359)
+++++... ++ . ++.+. +.-.+.+++|.... .+...+..|++|++.|-
T Consensus 193 ~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGR 255 (304)
T 1to3_A 193 LYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGR 255 (304)
T ss_dssp EEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESH
T ss_pred EEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEeh
Confidence 77777641 12 1 23232 33343455554322 13345788999999873
No 97
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=92.96 E-value=0.29 Score=45.86 Aligned_cols=84 Identities=7% Similarity=-0.033 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHHCCCC---EEEEccCc----cC-cCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC-CCHHHHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAE---GMIVGGTT----GE-GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHAT 146 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~---Gl~v~Gst----GE-~~~LT~~Er~~li~~~v~~~~grvpViagvg~-~st~~ai~la 146 (359)
-+.+.+.+.++.+.+.|++ +|-++-++ |. .+.-+.+...++++.+.+.+ ++||++-++. .+.++..+++
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~--~~Pv~vK~~~~~~~~~~~~~a 180 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY--GLPFGVKMPPYFDIAHFDTAA 180 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH--CSCEEEEECCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCCCCHHHHHHHH
Confidence 5788999999999999999 88887641 11 11226777788998888877 5799987654 3677888899
Q ss_pred HHHHhCC-CCEEEEcC
Q 018253 147 EQGFAVG-MHAALHIN 161 (359)
Q Consensus 147 ~~a~~~G-adav~v~p 161 (359)
+.++++| +|++.+..
T Consensus 181 ~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 181 AVLNEFPLVKFVTCVN 196 (314)
T ss_dssp HHHHTCTTEEEEEECC
T ss_pred HHHHhcCCceEEEEeC
Confidence 9999999 99998875
No 98
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=92.92 E-value=0.7 Score=43.25 Aligned_cols=103 Identities=14% Similarity=-0.031 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcC-----CCCHHHHHHHHHHHHHhhCC-CcEEEEec---CCCCHHHHHHHHHHHH
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFGA-SVKVIGNT---GSNSTREAIHATEQGF 150 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~-----~LT~~Er~~li~~~v~~~~g-rvpViagv---g~~st~~ai~la~~a~ 150 (359)
.+++.++.+.++|++-+-+..+++|.+ ..|.+|-.+.++.+++.+.. ...|.++. +..+.+..++.++.+.
T Consensus 81 di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~ 160 (293)
T 3ewb_X 81 DIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAI 160 (293)
T ss_dssp HHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHH
Confidence 345555555567777777777777765 56777766666666654322 23344432 2245566666777777
Q ss_pred hCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC
Q 018253 151 AVGMHAALHINPYYGKTSLEGLISHFDSVLSMG 183 (359)
Q Consensus 151 ~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~ 183 (359)
++|+|.+.+. =.....+++++.+.++.+.+..
T Consensus 161 ~~G~~~i~l~-DT~G~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 161 DAGATVINIP-DTVGYTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp HTTCCEEEEE-CSSSCCCHHHHHHHHHHHHHHC
T ss_pred HcCCCEEEec-CCCCCCCHHHHHHHHHHHHHhc
Confidence 7777654443 2233345666666666665543
No 99
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=92.90 E-value=1 Score=45.31 Aligned_cols=95 Identities=9% Similarity=0.065 Sum_probs=62.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag-vg~~st~~ai~la~~a~~~Gadav~v 159 (359)
....++.+++.|++++.+..+.|.- +.-.++++.+.+.+ +++||++| +. +.+.++.+.++|+|++.+
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~-----~~~~~~i~~i~~~~-~~~pvi~~~v~------t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNS-----VYQIAMVHYIKQKY-PHLQVIGGNVV------TAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCS-----HHHHHHHHHHHHHC-TTCEEEEEEEC------SHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcc-----hhHHHHHHHHHHhC-CCCceEecccc------hHHHHHHHHHcCCCEEEE
Confidence 4556777889999999997776632 33457788888877 46899984 52 245588888999999988
Q ss_pred cC-CCC---------CCCCHHHHHHHHHHHHhc--CCeEE
Q 018253 160 IN-PYY---------GKTSLEGLISHFDSVLSM--GPTII 187 (359)
Q Consensus 160 ~p-P~y---------~~~s~~~l~~yf~~Ia~a--~Piii 187 (359)
.. |-. ....+..-.....++++. .||+.
T Consensus 324 g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia 363 (514)
T 1jcn_A 324 GMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIA 363 (514)
T ss_dssp CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred CCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEE
Confidence 43 211 111234445566666664 56653
No 100
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.87 E-value=3.8 Score=39.40 Aligned_cols=169 Identities=14% Similarity=0.101 Sum_probs=101.1
Q ss_pred EeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHH
Q 018253 64 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAI 143 (359)
Q Consensus 64 ~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai 143 (359)
|.+.-|++. .+ + .++...+...|--|++. ..+|.+|..+.++.+.+. ++.|+.++++... .
T Consensus 47 Pii~apM~~-vt-~----~~lA~avA~~GGlgii~-------~~~s~e~~~~~I~~vk~~--~~~pvga~ig~~~----~ 107 (361)
T 3khj_A 47 PLISSAMDT-VT-E----HLMAVGMARLGGIGIIH-------KNMDMESQVNEVLKVKNS--GGLRVGAAIGVNE----I 107 (361)
T ss_dssp SEEECSSTT-TC-S----HHHHHHHHHTTCEEEEC-------SSSCHHHHHHHHHHHHHT--TCCCCEEEECTTC----H
T ss_pred CEEeecCCC-CC-c----HHHHHHHHHcCCCeEEe-------cCCCHHHHHHHHHHHHhc--cCceEEEEeCCCH----H
Confidence 445566652 21 1 25666566666555552 268999999998887764 4678888887655 7
Q ss_pred HHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEeccC--
Q 018253 144 HATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECV-- 219 (359)
Q Consensus 144 ~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK~ss-- 219 (359)
+.++.+.++|+|.+.+-.+.- ..+.+.+..+.+.+. .|+++-|. .+++...++.+. .+-+||.+.
T Consensus 108 e~a~~l~eaGad~I~ld~a~G---~~~~~~~~i~~i~~~~~~~Vivg~v-------~t~e~A~~l~~a-GaD~I~VG~~~ 176 (361)
T 3khj_A 108 ERAKLLVEAGVDVIVLDSAHG---HSLNIIRTLKEIKSKMNIDVIVGNV-------VTEEATKELIEN-GADGIKVGIGP 176 (361)
T ss_dssp HHHHHHHHTTCSEEEECCSCC---SBHHHHHHHHHHHHHCCCEEEEEEE-------CSHHHHHHHHHT-TCSEEEECSSC
T ss_pred HHHHHHHHcCcCeEEEeCCCC---CcHHHHHHHHHHHHhcCCcEEEccC-------CCHHHHHHHHHc-CcCEEEEecCC
Confidence 788888999999887754431 235566666666664 67877543 567888887753 222333320
Q ss_pred --------------chh----hHhhhh-CCceEEEe--cC-CchhhhhhhhcCCceeeccccccc
Q 018253 220 --------------GND----RVEHYT-GNGIVVWS--GN-DDQCHDARWNHGATGVISVTSNLV 262 (359)
Q Consensus 220 --------------~d~----~l~~~~-~~~~~v~~--G~-d~~~~~~~l~~Ga~G~is~~an~~ 262 (359)
.+. .+.+.. ..++.|+. |- +..-+..++.+|++|++.+.+.+.
T Consensus 177 Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~ 241 (361)
T 3khj_A 177 GSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAG 241 (361)
T ss_dssp CTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTT
T ss_pred CcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhc
Confidence 111 111111 11344554 33 222223458899999998877654
No 101
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=92.84 E-value=0.2 Score=48.54 Aligned_cols=91 Identities=13% Similarity=0.137 Sum_probs=57.4
Q ss_pred HHHHHHHCCCCEEEEccCccCcC-----------------CCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHH
Q 018253 84 LVNMQIVNGAEGMIVGGTTGEGQ-----------------LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHAT 146 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~GstGE~~-----------------~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la 146 (359)
.+..+.+.|+++|.+.|..|-.+ .++..+-. . . ++.+.+++|||+.=|=.+-.++++..
T Consensus 222 ~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L--~-~-v~~~~~~ipvia~GGI~~g~Dv~KaL 297 (365)
T 3sr7_A 222 TIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVL--L-N-AQPLMDKVEILASGGIRHPLDIIKAL 297 (365)
T ss_dssp HHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHH--H-H-HGGGTTTSEEEECSSCCSHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHH--H-H-HHHhcCCCeEEEeCCCCCHHHHHHHH
Confidence 45667788999999988866532 23322222 2 2 23455689999854444566655543
Q ss_pred HHHHhCCCCEEEEcCCCCCC---CCHHHHHHHHHHHHhc
Q 018253 147 EQGFAVGMHAALHINPYYGK---TSLEGLISHFDSVLSM 182 (359)
Q Consensus 147 ~~a~~~Gadav~v~pP~y~~---~s~~~l~~yf~~Ia~a 182 (359)
.+|||+|++..|+.+. ..++++.++++.+.+.
T Consensus 298 ----alGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~e 332 (365)
T 3sr7_A 298 ----VLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKED 332 (365)
T ss_dssp ----HHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred ----HcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 3899999999998753 3456777777776653
No 102
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=92.74 E-value=0.57 Score=44.16 Aligned_cols=100 Identities=12% Similarity=0.012 Sum_probs=69.0
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhh-CCCcEEEEecC-------C-CCH-HHHHHHHHHHHhC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF-GASVKVIGNTG-------S-NST-REAIHATEQGFAV 152 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~-~grvpViagvg-------~-~st-~~ai~la~~a~~~ 152 (359)
.-++..++.|++++-+++..| ...+..|+.+.++.+++.+ .-.+|+++-+. . .+. +-..+.++.+.++
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~--~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~l 189 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWR--SDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDS 189 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEEC--TTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTS
T ss_pred hhHHHHHHcCCCEEEEEEEcC--CCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHc
Confidence 446777889999998777666 3344577777777777764 44688877543 1 223 4445559999999
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CC
Q 018253 153 GMHAALHINPYYGKTSLEGLISHFDSVLSM--GP 184 (359)
Q Consensus 153 Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~P 184 (359)
|||.+=+-+|.+...+.+++.+..+..... .|
T Consensus 190 GaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P 223 (304)
T 1to3_A 190 GADLYKVEMPLYGKGARSDLLTASQRLNGHINMP 223 (304)
T ss_dssp SCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSC
T ss_pred CCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCC
Confidence 999887877765334677777777776553 56
No 103
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=92.73 E-value=0.32 Score=44.18 Aligned_cols=87 Identities=17% Similarity=0.215 Sum_probs=49.7
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
...++.+.+.|++.|++.+.+-.+.....+ .++++.+.+.+ ++|||++-|-.+.+++.++.+ .|||++++..
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~--~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~----~Gadgv~vgs 230 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSGYD--TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFL----AGADAALAAS 230 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSCCC--HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHH----HTCSEEEEST
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCCCC--HHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHH----cCCHHHHccH
Confidence 344555667899999986644333221111 34555555544 689999877666777777653 6999999998
Q ss_pred CCCCCC-CHHHHHHHH
Q 018253 162 PYYGKT-SLEGLISHF 176 (359)
Q Consensus 162 P~y~~~-s~~~l~~yf 176 (359)
-.|..+ +.+++.+|+
T Consensus 231 al~~~~~~~~~~~~~l 246 (266)
T 2w6r_A 231 VFHFREIDMRELKEYL 246 (266)
T ss_dssp TTC-------------
T ss_pred HHHcCCCCHHHHHHHH
Confidence 888654 555555554
No 104
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.72 E-value=0.78 Score=43.81 Aligned_cols=124 Identities=8% Similarity=-0.039 Sum_probs=76.1
Q ss_pred CCHHHHHHHHHH-------HHHCCCCEEEEccCc----------------cCcCCCCHHHHHH----HHHHHHHhhCCCc
Q 018253 76 FDLEAYDDLVNM-------QIVNGAEGMIVGGTT----------------GEGQLMSWDEHIM----LIGHTVNCFGASV 128 (359)
Q Consensus 76 ID~~~l~~li~~-------li~~Gv~Gl~v~Gst----------------GE~~~LT~~Er~~----li~~~v~~~~grv 128 (359)
++.+.++++++. ..++|.|||=+.+.. .|+- =|.+.|.+ +++.+++.+ +.
T Consensus 134 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yG-GslenR~r~~~eiv~avr~~v--~~ 210 (340)
T 3gr7_A 134 MTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYG-GSPENRYRFLGEVIDAVREVW--DG 210 (340)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHC--CS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCccc-CCHHHHHHHHHHHHHHHHHhc--CC
Confidence 555555555544 456899999998874 2322 36777754 445555555 56
Q ss_pred EEEEecC-------CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCC----CHHHHHHHHHHHHhc--CCeEEEeCCCCCC
Q 018253 129 KVIGNTG-------SNSTREAIHATEQGFAVGMHAALHINPYYGKT----SLEGLISHFDSVLSM--GPTIIYNVPSRTG 195 (359)
Q Consensus 129 pViagvg-------~~st~~ai~la~~a~~~Gadav~v~pP~y~~~----s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg 195 (359)
||.+=++ +.+.++++++++..+++|+|.+-+....+... .+..-..+.+.|.+. +||+.= |
T Consensus 211 pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~------G 284 (340)
T 3gr7_A 211 PLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAV------G 284 (340)
T ss_dssp CEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEE------S
T ss_pred ceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEee------C
Confidence 7766444 24688999999999999999998875432210 111123444555554 576542 3
Q ss_pred CCCCHHHHHHHhc
Q 018253 196 QDIPPRVIHTMAQ 208 (359)
Q Consensus 196 ~~ls~e~l~~La~ 208 (359)
---+++..+++.+
T Consensus 285 gI~s~e~a~~~L~ 297 (340)
T 3gr7_A 285 LITSGWQAEEILQ 297 (340)
T ss_dssp SCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 2236777777664
No 105
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=92.72 E-value=0.66 Score=42.35 Aligned_cols=94 Identities=11% Similarity=0.069 Sum_probs=66.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE--ecCCCCHHHHHHHHHHHHhCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia--gvg~~st~~ai~la~~a~~~G 153 (359)
.+.+......+...+.|++.+.+.- .... +.++.+++.+ ++||++ |++..+.+++++.++.+.+.|
T Consensus 163 ~~~~~~~~~a~~a~~~Gad~i~~~~------~~~~----~~l~~i~~~~--~ipvva~GGi~~~~~~~~~~~~~~~~~~G 230 (273)
T 2qjg_A 163 RDPELVAHAARLGAELGADIVKTSY------TGDI----DSFRDVVKGC--PAPVVVAGGPKTNTDEEFLQMIKDAMEAG 230 (273)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECC------CSSH----HHHHHHHHHC--SSCEEEECCSCCSSHHHHHHHHHHHHHHT
T ss_pred CCHhHHHHHHHHHHHcCCCEEEECC------CCCH----HHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 4556666666888899999776652 2333 3444555544 578876 455445899999999999999
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHh
Q 018253 154 MHAALHINPYYGKTSLEGLISHFDSVLS 181 (359)
Q Consensus 154 adav~v~pP~y~~~s~~~l~~yf~~Ia~ 181 (359)
++++++..-.+..++..+..+.|.++.+
T Consensus 231 a~gv~vg~~i~~~~~~~~~~~~l~~~~~ 258 (273)
T 2qjg_A 231 AAGVAVGRNIFQHDDVVGITRAVCKIVH 258 (273)
T ss_dssp CSEEECCHHHHTSSSHHHHHHHHHHHHH
T ss_pred CcEEEeeHHhhCCCCHHHHHHHHHHHHh
Confidence 9999998877777777766666665554
No 106
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=92.71 E-value=4.2 Score=36.42 Aligned_cols=181 Identities=13% Similarity=0.090 Sum_probs=98.5
Q ss_pred CceEEeeecCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecC---
Q 018253 60 LRLITAIKTPYLPDGRF-DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG--- 135 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~I-D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg--- 135 (359)
.|+++..-.+ +++-+ +.+-..++...+.+.|+.|+-+.+ .+-++.+.+.+ ++||+.-.-
T Consensus 18 ~~livscq~~--~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~-------------~~~i~~ir~~v--~~Pvig~~k~~~ 80 (229)
T 3q58_A 18 GGLIVSCQPV--PGSPMDKPEIVAAMAQAAASAGAVAVRIEG-------------IENLRTVRPHL--SVPIIGIIKRDL 80 (229)
T ss_dssp CCEEEECCCC--TTSTTCSHHHHHHHHHHHHHTTCSEEEEES-------------HHHHHHHGGGC--CSCEEEECBCCC
T ss_pred CCEEEEEeCC--CCCCCCCcchHHHHHHHHHHCCCcEEEECC-------------HHHHHHHHHhc--CCCEEEEEeecC
Confidence 4566654332 22222 345688899999999999998731 23455555555 579873221
Q ss_pred -C--CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCC-CHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhcC-
Q 018253 136 -S--NSTREAIHATEQGFAVGMHAALHINPYYGKT-SLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQS- 209 (359)
Q Consensus 136 -~--~st~~ai~la~~a~~~Gadav~v~pP~y~~~-s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~~- 209 (359)
. .-.....+.++.+.++|||.+++....-..+ ..++++++++ +. .+++. +. -+.+...+..+.
T Consensus 81 ~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~---~~g~~v~~-~v-------~t~eea~~a~~~G 149 (229)
T 3q58_A 81 TGSPVRITPYLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIR---LHGLLAMA-DC-------STVNEGISCHQKG 149 (229)
T ss_dssp SSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHH---HTTCEEEE-EC-------SSHHHHHHHHHTT
T ss_pred CCCceEeCccHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHH---HCCCEEEE-ec-------CCHHHHHHHHhCC
Confidence 0 1111234556677889999998876543223 3344444444 33 34432 32 246666666543
Q ss_pred CCeEEEecc---------Cchhh-HhhhhCCceEEEe--cCC-chhhhhhhhcCCceeecccccccHHHHHH
Q 018253 210 PNLAGVKEC---------VGNDR-VEHYTGNGIVVWS--GND-DQCHDARWNHGATGVISVTSNLVPGMMRE 268 (359)
Q Consensus 210 pnivGiK~s---------s~d~~-l~~~~~~~~~v~~--G~d-~~~~~~~l~~Ga~G~is~~an~~P~l~~~ 268 (359)
..++|+... ..+.. +.+....++.++. |-. ..-+...+.+|++|++.|.+-.-|....+
T Consensus 150 ad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~p~~~~~ 221 (229)
T 3q58_A 150 IEFIGTTLSGYTGPITPVEPDLAMVTQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHICQ 221 (229)
T ss_dssp CSEEECTTTTSSSSCCCSSCCHHHHHHHHTTTCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHCHHHHHH
T ss_pred CCEEEecCccCCCCCcCCCCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcChHHHHH
Confidence 456664321 12222 2232222444444 331 12223457789999999987777766544
No 107
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=92.70 E-value=0.86 Score=43.97 Aligned_cols=118 Identities=12% Similarity=0.045 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcc----------------CcCCCCHHHHHHH----HHHHHHhhCCCcEEEEecC----
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTG----------------EGQLMSWDEHIML----IGHTVNCFGASVKVIGNTG---- 135 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstG----------------E~~~LT~~Er~~l----i~~~v~~~~grvpViagvg---- 135 (359)
.+.+-.+...++|.|||=+.+..| |+ -=|.+.|.++ ++.+++.++.+ ||.+=++
T Consensus 162 ~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~y-GGslenr~r~~~eiv~avr~~vg~~-pv~vris~~~~ 239 (365)
T 2gou_A 162 DYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEY-GGSLENRLRFLDEVVAALVDAIGAE-RVGVRLAPLTT 239 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTT-SSSHHHHTHHHHHHHHHHHHHHCGG-GEEEEECSSCC
T ss_pred HHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCccc-CcchhhhHHHHHHHHHHHHHHcCCC-cEEEEEccccc
Confidence 344444455679999999987653 21 1245666544 55555666555 7777333
Q ss_pred ------CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC-CC-HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHH
Q 018253 136 ------SNSTREAIHATEQGFAVGMHAALHINPYYGK-TS-LEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHT 205 (359)
Q Consensus 136 ------~~st~~ai~la~~a~~~Gadav~v~pP~y~~-~s-~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~ 205 (359)
..+.++++++++.+++.|+|++-+..+.|.. +. +. ++.+.|.+. .||+.= .| ++++...+
T Consensus 240 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~---~~~~~i~~~~~iPvi~~-----Gg--i~~~~a~~ 309 (365)
T 2gou_A 240 LNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPV---SFKRALREAYQGVLIYA-----GR--YNAEKAEQ 309 (365)
T ss_dssp TTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH---HHHHHHHHHCCSEEEEE-----SS--CCHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccH---HHHHHHHHHCCCcEEEe-----CC--CCHHHHHH
Confidence 2367889999999999999999998875421 11 11 344555554 465532 23 38888888
Q ss_pred HhcC
Q 018253 206 MAQS 209 (359)
Q Consensus 206 La~~ 209 (359)
+.+.
T Consensus 310 ~l~~ 313 (365)
T 2gou_A 310 AIND 313 (365)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 7653
No 108
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=92.66 E-value=0.16 Score=49.33 Aligned_cols=93 Identities=18% Similarity=0.132 Sum_probs=59.4
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHH--HH----------------------HHHHHHHHhhCCCcEEEEecCCCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDE--HI----------------------MLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~E--r~----------------------~li~~~v~~~~grvpViagvg~~s 138 (359)
..++.+.+.|+++|.+.|+.|- +.+.=| |. ..+..+.+.++ ++|||+.=|=.+
T Consensus 202 ~~A~~l~~aGad~I~V~g~GGt--~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~~ 278 (368)
T 3vkj_A 202 ETAKLLYSYGIKNFDTSGQGGT--NWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIRS 278 (368)
T ss_dssp HHHHHHHHTTCCEEECCCBTSB--CHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TCEEEEESSCCS
T ss_pred HHHHHHHhCCCCEEEEeCCCCC--cccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CCcEEEECCCCC
Confidence 4577788999999999888662 111111 10 12233444443 699998555455
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCC--CCHHHHHHHHHHHHhc
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGK--TSLEGLISHFDSVLSM 182 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~--~s~~~l~~yf~~Ia~a 182 (359)
..++++.. .+|||+|++..|+.+. ..++++.++++.+.+.
T Consensus 279 ~~d~~kal----~lGA~~v~ig~~~l~~~~~G~~~v~~~l~~l~~e 320 (368)
T 3vkj_A 279 GLDAAKAI----ALGADIAGMALPVLKSAIEGKESLEQFFRKIIFE 320 (368)
T ss_dssp HHHHHHHH----HHTCSEEEECHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----HcCCCEEEEcHHHHHHHhcChHHHHHHHHHHHHH
Confidence 66665443 3799999999997742 2457777777777654
No 109
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=92.55 E-value=3.8 Score=37.47 Aligned_cols=177 Identities=12% Similarity=0.091 Sum_probs=99.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCcc----CcCCCCHHHH---------HHHHHHHHHhhCCCcEEEEecC
Q 018253 69 PYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTG----EGQLMSWDEH---------IMLIGHTVNCFGASVKVIGNTG 135 (359)
Q Consensus 69 PF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstG----E~~~LT~~Er---------~~li~~~v~~~~grvpViagvg 135 (359)
||-.-|.-|.+...++++.|.++|+|-|=++=-.+ +++..-..-. ..+++.+.+ +..++|++.=..
T Consensus 18 ~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~-~r~~~Pivlm~Y 96 (252)
T 3tha_A 18 AYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLAR-IKTKKALVFMVY 96 (252)
T ss_dssp EEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHH-CCCSSEEEEECC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHH-HhcCCCEEEEec
Confidence 44456789999999999999999999765543222 2221111111 334444433 334589988666
Q ss_pred CCCHHH--HHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCC
Q 018253 136 SNSTRE--AIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPN 211 (359)
Q Consensus 136 ~~st~~--ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~-~pn 211 (359)
.|.... .=++++.++++|+|++++.- . ..|+..+|.+...+. +..+..=.| .-+.+.++++++ .+.
T Consensus 97 ~N~i~~~G~e~F~~~~~~aGvdG~IipD--L---P~eE~~~~~~~~~~~Gl~~I~lvaP-----~t~~eRi~~ia~~a~g 166 (252)
T 3tha_A 97 YNLIFSYGLEKFVKKAKSLGICALIVPE--L---SFEESDDLIKECERYNIALITLVSV-----TTPKERVKKLVKHAKG 166 (252)
T ss_dssp HHHHHHHCHHHHHHHHHHTTEEEEECTT--C---CGGGCHHHHHHHHHTTCEECEEEET-----TSCHHHHHHHHTTCCS
T ss_pred cCHHHHhhHHHHHHHHHHcCCCEEEeCC--C---CHHHHHHHHHHHHHcCCeEEEEeCC-----CCcHHHHHHHHHhCCC
Confidence 654433 45689999999999998853 2 224444444433333 332222233 234788999986 456
Q ss_pred eEEEecc---Cch-----h-------hHhhhhCCceEEEecCCc---hhhhhhhhcCCceeecccc
Q 018253 212 LAGVKEC---VGN-----D-------RVEHYTGNGIVVWSGNDD---QCHDARWNHGATGVISVTS 259 (359)
Q Consensus 212 ivGiK~s---s~d-----~-------~l~~~~~~~~~v~~G~d~---~~~~~~l~~Ga~G~is~~a 259 (359)
++.+=-. +|. . ++++.. +..+..|..= .-... +..++||+|.|++
T Consensus 167 FiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~a~~-~~~~ADGVIVGSA 229 (252)
T 3tha_A 167 FIYLLASIGITGTKSVEEAILQDKVKEIRSFT--NLPIFVGFGIQNNQDVKR-MRKVADGVIVGTS 229 (252)
T ss_dssp CEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHH-HTTTSSEEEECHH
T ss_pred eEEEEecCCCCCcccCCCHHHHHHHHHHHHhc--CCcEEEEcCcCCHHHHHH-HHhcCCEEEECHH
Confidence 6655321 121 1 122222 3445555431 12223 4568999998865
No 110
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=92.53 E-value=0.5 Score=44.86 Aligned_cols=90 Identities=11% Similarity=0.051 Sum_probs=57.9
Q ss_pred HHHHHHCCCCEEEEccCcc---------C-----------cCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHH
Q 018253 85 VNMQIVNGAEGMIVGGTTG---------E-----------GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIH 144 (359)
Q Consensus 85 i~~li~~Gv~Gl~v~GstG---------E-----------~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~ 144 (359)
+..+.+.|+++|.+.|+-| . ...++. .+.+..+.+.++ ++|||+.=|=.+..++.+
T Consensus 198 a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~---~~~l~~v~~~~~-~ipvia~GGI~~~~d~~k 273 (332)
T 1vcf_A 198 ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPT---ARAILEVREVLP-HLPLVASGGVYTGTDGAK 273 (332)
T ss_dssp HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBH---HHHHHHHHHHCS-SSCEEEESSCCSHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccH---HHHHHHHHHhcC-CCeEEEECCCCCHHHHHH
Confidence 4577889999999966433 1 112232 234455556554 699997444445666665
Q ss_pred HHHHHHhCCCCEEEEcCCCCCC--CCHHHHHHHHHHHHhc
Q 018253 145 ATEQGFAVGMHAALHINPYYGK--TSLEGLISHFDSVLSM 182 (359)
Q Consensus 145 la~~a~~~Gadav~v~pP~y~~--~s~~~l~~yf~~Ia~a 182 (359)
... +|||+|++..|+.+. ..++++.++++.+.+.
T Consensus 274 al~----~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~e 309 (332)
T 1vcf_A 274 ALA----LGADLLAVARPLLRPALEGAERVAAWIGDYLEE 309 (332)
T ss_dssp HHH----HTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHH----hCCChHhhhHHHHHHHhccHHHHHHHHHHHHHH
Confidence 443 699999999997742 3566777777666553
No 111
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.52 E-value=1.2 Score=41.48 Aligned_cols=116 Identities=11% Similarity=0.145 Sum_probs=86.2
Q ss_pred cCCceEE--eeecCCC--CCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe
Q 018253 58 KALRLIT--AIKTPYL--PDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN 133 (359)
Q Consensus 58 ~~~Gi~~--al~TPF~--~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag 133 (359)
+-.|+-+ .+.+-|. .+++.|.+-+.++++.+.+.|++.|.+.-|.| .+++++-.++++.+.+.++ .+|+=++
T Consensus 131 ~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~~~~lv~~l~~~~~-~~~i~~H 206 (298)
T 2cw6_A 131 QSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIG---VGTPGIMKDMLSAVMQEVP-LAALAVH 206 (298)
T ss_dssp HHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTS---CCCHHHHHHHHHHHHHHSC-GGGEEEE
T ss_pred HHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCC---CcCHHHHHHHHHHHHHhCC-CCeEEEE
Confidence 3455433 3443343 24679999999999999999999999999998 5899999999999998874 5676665
Q ss_pred cCCCCHHHHHHHHHHHHhCCCCEEEEcC------CCC----CCCCHHHHHHHHHH
Q 018253 134 TGSNSTREAIHATEQGFAVGMHAALHIN------PYY----GKTSLEGLISHFDS 178 (359)
Q Consensus 134 vg~~st~~ai~la~~a~~~Gadav~v~p------P~y----~~~s~~~l~~yf~~ 178 (359)
. +++..-++..+..|.++|++.+-..- ||. ...+-|+++..++.
T Consensus 207 ~-Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~ 260 (298)
T 2cw6_A 207 C-HDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEG 260 (298)
T ss_dssp E-BCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHH
T ss_pred E-CCCCchHHHHHHHHHHhCCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHh
Confidence 4 45677778888899999999886542 322 23456777777764
No 112
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=92.52 E-value=0.35 Score=43.54 Aligned_cols=88 Identities=16% Similarity=0.200 Sum_probs=56.8
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
...++.+.+.|++.+++.+.+-++..... -.++++.+.+.+ ++|||++=|-.+.++..++. +.|+|++++..
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~--~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~----~~Gadgv~vGs 225 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGTKSGY--DTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAF----LAGADAALAAS 225 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTSCSCC--CHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHH----HTTCSEEEESH
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCCCCCC--CHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHH----HcCChHHHHHH
Confidence 44556667899999998765433322221 123444444443 68999875555556665544 48999999998
Q ss_pred CCCCCC-CHHHHHHHHH
Q 018253 162 PYYGKT-SLEGLISHFD 177 (359)
Q Consensus 162 P~y~~~-s~~~l~~yf~ 177 (359)
-.|..+ +.++..++++
T Consensus 226 al~~~~~~~~~~~~~l~ 242 (253)
T 1thf_D 226 VFHFREIDVRELKEYLK 242 (253)
T ss_dssp HHHTTCSCHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHH
Confidence 777665 7777777764
No 113
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=92.51 E-value=1.6 Score=38.34 Aligned_cols=110 Identities=13% Similarity=0.154 Sum_probs=66.7
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
...++.+++.|++.+.+....-+.+..+. .++++.+.+..+ ..++++++. +.++ ++.+.+.|+|.+++.+
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~---~~~i~~~~~~~~-~~~v~~~~~--t~~e----~~~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETL---DELVSYIRTHAP-NVEIMADIA--TVEE----AKNAARLGFDYIGTTL 147 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCH---HHHHHHHHHHCT-TSEEEEECS--SHHH----HHHHHHTTCSEEECTT
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCH---HHHHHHHHHhCC-CceEEecCC--CHHH----HHHHHHcCCCEEEeCC
Confidence 34566678899999887655433222333 456777777663 567776654 3444 4558889999999887
Q ss_pred CCCCCCC-----HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-CHHHHHHHhc
Q 018253 162 PYYGKTS-----LEGLISHFDSVLSM--GPTIIYNVPSRTGQDI-PPRVIHTMAQ 208 (359)
Q Consensus 162 P~y~~~s-----~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~l-s~e~l~~La~ 208 (359)
+.|...+ ...-.++++++.+. .|++. .| .+ +++.+.++.+
T Consensus 148 ~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia------~G-GI~~~~~~~~~~~ 195 (223)
T 1y0e_A 148 HGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIA------EG-NVITPDMYKRVMD 195 (223)
T ss_dssp TTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEE------ES-SCCSHHHHHHHHH
T ss_pred CcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEE------ec-CCCCHHHHHHHHH
Confidence 7663211 12234566666664 34442 12 34 6777777764
No 114
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=92.50 E-value=4.7 Score=37.86 Aligned_cols=110 Identities=12% Similarity=0.141 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCc-----cCcCC----CCHHHHHHHHHHHHHhhCCCcEEEEec------CCCCHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTT-----GEGQL----MSWDEHIMLIGHTVNCFGASVKVIGNT------GSNSTR 140 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~Gst-----GE~~~----LT~~Er~~li~~~v~~~~grvpViagv------g~~st~ 140 (359)
.+.+.++..+..+.+.||+.|+++..- |++.. +. .=.+|++.+.+..+.+.-|-+.. .+.+.+
T Consensus 83 ~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~--~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~ 160 (310)
T 3apt_A 83 QSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFR--YAAELVALIRERYGDRVSVGGAAYPEGHPESESLE 160 (310)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCS--SHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCC--CHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHH
Confidence 789999999999999999998876422 31101 22 33466666555433223332222 233666
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCC
Q 018253 141 EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVP 191 (359)
Q Consensus 141 ~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a---~PiiiYn~P 191 (359)
.-++..+.=.++|||.++.. ++| +.+.+.+|.+.+.++ .||+..=.|
T Consensus 161 ~d~~~Lk~Kv~aGAdf~iTQ-~ff---D~~~~~~f~~~~r~~Gi~vPIi~GImP 210 (310)
T 3apt_A 161 ADLRHFKAKVEAGLDFAITQ-LFF---NNAHYFGFLERARRAGIGIPILPGIMP 210 (310)
T ss_dssp HHHHHHHHHHHHHCSEEEEC-CCS---CHHHHHHHHHHHHHTTCCSCEECEECC
T ss_pred HHHHHHHHHHHcCCCEEEec-ccC---CHHHHHHHHHHHHHcCCCCeEEEEecc
Confidence 66776666678999965554 666 678888888888765 688877666
No 115
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=92.36 E-value=0.73 Score=43.44 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=59.0
Q ss_pred HHHHHHHCCCCEEEEccCccCc-----CCCCHHHHHHHHHHHHHhhCC-CcEEEEec---------CCCCHHHHHHHHHH
Q 018253 84 LVNMQIVNGAEGMIVGGTTGEG-----QLMSWDEHIMLIGHTVNCFGA-SVKVIGNT---------GSNSTREAIHATEQ 148 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~GstGE~-----~~LT~~Er~~li~~~v~~~~g-rvpViagv---------g~~st~~ai~la~~ 148 (359)
-++..+++|++.+-+..++.|. ...|.+|-.+.++.+++.+.. ...|.+.+ +..+.+..++.++.
T Consensus 86 ~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (307)
T 1ydo_A 86 GLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEA 165 (307)
T ss_dssp HHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHH
T ss_pred hHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHH
Confidence 3666677889988888888875 445677766665555554321 23333221 11356677777777
Q ss_pred HHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC
Q 018253 149 GFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMG 183 (359)
Q Consensus 149 a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~ 183 (359)
+.++|+|.+.+.. .....+++++.+.++.+.+..
T Consensus 166 ~~~~Ga~~i~l~D-T~G~~~P~~v~~lv~~l~~~~ 199 (307)
T 1ydo_A 166 LFEFGISELSLGD-TIGAANPAQVETVLEALLARF 199 (307)
T ss_dssp HHHHTCSCEEEEC-SSCCCCHHHHHHHHHHHHTTS
T ss_pred HHhcCCCEEEEcC-CCCCcCHHHHHHHHHHHHHhC
Confidence 7777777555542 233345666666666666543
No 116
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=92.32 E-value=3.1 Score=40.03 Aligned_cols=120 Identities=12% Similarity=0.126 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHCCCCEEEEccCcc----------------CcCCCCHHHHHH----HHHHHHHhhCCCcEEEEecCCC--
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTG----------------EGQLMSWDEHIM----LIGHTVNCFGASVKVIGNTGSN-- 137 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstG----------------E~~~LT~~Er~~----li~~~v~~~~grvpViagvg~~-- 137 (359)
.+.+-..+..++|.|||=+.+..| |+-- |.+-|.+ +++.+++.++.+ ||.+=++..
T Consensus 162 ~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGG-slenR~rf~~evv~aVr~~vg~~-~v~vRls~~~~ 239 (361)
T 3gka_A 162 AFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGG-SIENRARLLLEVVDAAIDVWSAA-RVGVHLAPRGD 239 (361)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHSHHHHHHHHHHHHHHCGG-GEEEEECTTCC
T ss_pred HHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCC-ChhhcHHHHHHHHHHHHHHcCCC-eEEEecccccc
Confidence 344555566679999999998763 2111 5666654 455555556555 777744432
Q ss_pred --------CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh
Q 018253 138 --------STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA 207 (359)
Q Consensus 138 --------st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La 207 (359)
+.++++++++..+++|+|.+-+..+.+.. .+.+.|.+. .||+.= | .++++..+++.
T Consensus 240 ~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-------~~~~~ik~~~~iPvi~~------G-git~e~a~~~l 305 (361)
T 3gka_A 240 AHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGD-------AIGQQLKAAFGGPFIVN------E-NFTLDSAQAAL 305 (361)
T ss_dssp SSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTT-------CCHHHHHHHHCSCEEEE------S-SCCHHHHHHHH
T ss_pred cCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCH-------HHHHHHHHHcCCCEEEe------C-CCCHHHHHHHH
Confidence 35789999999999999999888776322 233444443 586643 2 24899988887
Q ss_pred cC--CCeEEE
Q 018253 208 QS--PNLAGV 215 (359)
Q Consensus 208 ~~--pnivGi 215 (359)
+. -.+|++
T Consensus 306 ~~G~aD~V~i 315 (361)
T 3gka_A 306 DAGQADAVAW 315 (361)
T ss_dssp HTTSCSEEEE
T ss_pred HcCCccEEEE
Confidence 53 345554
No 117
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=92.31 E-value=1.2 Score=44.56 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEE
Q 018253 79 EAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 158 (359)
Q Consensus 79 ~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~ 158 (359)
+.+.+.+++++++|++.+.+..+.|. ..+-.+.++.+.+..+ ++||++|-+ .+.+++ +.+.++|+|++.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~-----~~~~~e~i~~i~~~~p-~~pvi~g~~-~t~e~a----~~l~~~G~d~I~ 304 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGH-----SRRVIETLEMIKADYP-DLPVVAGNV-ATPEGT----EALIKAGADAVK 304 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCS-----SHHHHHHHHHHHHHCT-TSCEEEEEE-CSHHHH----HHHHHTTCSEEE
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCc-----hHHHHHHHHHHHHHCC-CceEEeCCc-CCHHHH----HHHHHcCCCEEE
Confidence 34566788999999999999776663 2456677878777774 589988743 344444 677789999999
Q ss_pred Ec
Q 018253 159 HI 160 (359)
Q Consensus 159 v~ 160 (359)
+.
T Consensus 305 v~ 306 (494)
T 1vrd_A 305 VG 306 (494)
T ss_dssp EC
T ss_pred Ec
Confidence 84
No 118
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=92.21 E-value=0.22 Score=50.39 Aligned_cols=94 Identities=14% Similarity=0.193 Sum_probs=58.9
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhh-----CCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEE
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF-----GASVKVIGNTGSNSTREAIHATEQGFAVGMHAA 157 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~-----~grvpViagvg~~st~~ai~la~~a~~~Gadav 157 (359)
..+..+.+.|+++|.+.|..|-...-... ..+++..+.+.+ .+++|||+.=|=.+-.++++.. .+|||+|
T Consensus 355 e~A~~a~~aGad~I~vs~hgG~~~d~~~~-~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaL----alGAdaV 429 (511)
T 1kbi_A 355 EDVIKAAEIGVSGVVLSNHGGRQLDFSRA-PIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKAL----CLGAKGV 429 (511)
T ss_dssp HHHHHHHHTTCSEEEECCTTTTSSTTCCC-HHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHH----HHTCSEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCccCCCCCc-hHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHH----HcCCCEE
Confidence 34667889999999997766632111111 234455555555 4589999855544566666544 3799999
Q ss_pred EEcCCCCCCC---CHHHHHHHHHHHHh
Q 018253 158 LHINPYYGKT---SLEGLISHFDSVLS 181 (359)
Q Consensus 158 ~v~pP~y~~~---s~~~l~~yf~~Ia~ 181 (359)
++-.|+.+.. .++++.++++.+.+
T Consensus 430 ~iGr~~l~~~~~~G~~gv~~~l~~l~~ 456 (511)
T 1kbi_A 430 GLGRPFLYANSCYGRNGVEKAIEILRD 456 (511)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECHHHHHHHHhcChHHHHHHHHHHHH
Confidence 9999877543 24455555555443
No 119
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=92.16 E-value=4 Score=36.81 Aligned_cols=178 Identities=12% Similarity=0.136 Sum_probs=98.9
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHH
Q 018253 68 TPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATE 147 (359)
Q Consensus 68 TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~ 147 (359)
|-.++|-.+..+.++ .+.++|+|.|+++||+|= |.++-.++++.+.+ -++|++.=.+..+ .
T Consensus 11 ~~iDPdk~~~~~~~~----~~~~~GtD~i~vGGs~gv----t~~~~~~~v~~ik~---~~~Pvvlfp~~~~---~----- 71 (228)
T 3vzx_A 11 FKLDPNKDLPDEQLE----ILCESGTDAVIIGGSDGV----TEDNVLRMMSKVRR---FLVPCVLEVSAIE---A----- 71 (228)
T ss_dssp EEECTTSCCCTTHHH----HHHTSSCSEEEECCCSCC----CHHHHHHHHHHHTT---SSSCEEEECSCGG---G-----
T ss_pred EeECCCCCCCHHHHH----HHHHcCCCEEEECCcCCC----CHHHHHHHHHHhhc---cCCCEEEeCCCHH---H-----
Confidence 344555544444444 356899999999998775 67777777777665 3799998777631 1
Q ss_pred HHHhCCCCEEEEc------CCCCCCCCHHHHHHHHHHHHh--c-CCe--EEEeCCCCC-------CCCCCHHHHHHHhcC
Q 018253 148 QGFAVGMHAALHI------NPYYGKTSLEGLISHFDSVLS--M-GPT--IIYNVPSRT-------GQDIPPRVIHTMAQS 209 (359)
Q Consensus 148 ~a~~~Gadav~v~------pP~y~~~s~~~l~~yf~~Ia~--a-~Pi--iiYn~P~~t-------g~~ls~e~l~~La~~ 209 (359)
...|||++++. .|+|.-..+-+-.+-|....+ . .|. ++-| |..+ ...++++.+...+..
T Consensus 72 --v~~gaD~~l~pslln~~~~~~i~g~~~~a~~~~g~~~~~~e~i~~gYivv~-p~s~~~~~~~a~~~~~~e~~~~~a~~ 148 (228)
T 3vzx_A 72 --IVPGFDLYFIPSVLNSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIAN-PDCKAAALTEADADLNMDDIVAYARV 148 (228)
T ss_dssp --CCSCCSEEEEEEETTBSSGGGTTHHHHHHHHHHHHHHHHSCEEEEEEEECC-SSSHHHHHTTBCCCCCHHHHHHHHHH
T ss_pred --ccccCCEEEEeeecCCCCcchhhhHHHHHHHHcCCCCcccceeeeEEEEEC-CCCcceeeecccCCCCHHHHHHHHHH
Confidence 23699999886 244432222222222221111 2 342 2333 4322 234567777776632
Q ss_pred -----CCeEEEeccCc---hh----hHhhhhCCceEEEecCC----chhhhhhhhcCCceeeccccccc-HHHHHHHHH
Q 018253 210 -----PNLAGVKECVG---ND----RVEHYTGNGIVVWSGND----DQCHDARWNHGATGVISVTSNLV-PGMMRELMF 271 (359)
Q Consensus 210 -----pnivGiK~ss~---d~----~l~~~~~~~~~v~~G~d----~~~~~~~l~~Ga~G~is~~an~~-P~l~~~l~~ 271 (359)
=.++.+-. ++ +. ++++... +..+..|.. ++. .. +..|++|++.|++-+- |+...++.+
T Consensus 149 a~~~g~~~VYld~-sG~~~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e~a-~~-~~~gAD~VVVGSa~v~~p~~~~~~v~ 223 (228)
T 3vzx_A 149 SELLQLPIFYLEY-SGVLGDIEAVKKTKAVLE-TSTLFYGGGIKDAETA-KQ-YAEHADVIVVGNAVYEDFDRALKTVA 223 (228)
T ss_dssp HHHTTCSEEEEEC-TTSCCCHHHHHHHHHHCS-SSEEEEESSCCSHHHH-HH-HHTTCSEEEECTHHHHCHHHHHHHHH
T ss_pred HHHcCCCEEEecC-CCCcCCHHHHHHHHHhcC-CCCEEEeCCCCCHHHH-HH-HHhCCCEEEEChHHhcCHHHHHHHHH
Confidence 25666665 33 22 2333331 344555442 223 23 3479999998887663 555555543
No 120
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=92.14 E-value=1.4 Score=41.26 Aligned_cols=109 Identities=9% Similarity=-0.040 Sum_probs=66.0
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCC-CHHHHHHH----HHHHHHhh---CCCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLM-SWDEHIML----IGHTVNCF---GASVKVIGNTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~L-T~~Er~~l----i~~~v~~~---~grvpViagvg~~st~~ai~la~~a~~~G 153 (359)
+.+++.+-+.||+..++.++.+-+... ..++-.++ -+.+.+.+ ++|.--++++--...+++++..+++.+.|
T Consensus 61 ~~~l~~m~~~GV~~~V~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~l~~~~~~~a~~el~~~~~~g 140 (334)
T 2hbv_A 61 AFRIEEMDAQGVDVQVTCATPVMFGYTWEANKAAQWAERMNDFALEFAAHNPQRIKVLAQVPLQDLDLACKEASRAVAAG 140 (334)
T ss_dssp HHHHHHHHHHTCSEEEEEECGGGCCTTSCHHHHHHHHHHHHHHHHHHHTTCTTTEEECBCCCTTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECCCchhccCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEecCccCHHHHHHHHHHHHHcC
Confidence 455666667899998888766533222 33332222 22333322 34433333444445567888888777889
Q ss_pred CCEEEEcCCCC-CCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 154 MHAALHINPYY-GKTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 154 adav~v~pP~y-~~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
+.++-+.+-+. +..+.+.+...|+.+.+. +||+++--
T Consensus 141 ~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~ 179 (334)
T 2hbv_A 141 HLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPW 179 (334)
T ss_dssp CCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCC
Confidence 99987654322 124567788888888876 89999864
No 121
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=92.10 E-value=2.4 Score=38.20 Aligned_cols=103 Identities=17% Similarity=0.128 Sum_probs=79.9
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC-CcEEEEecCCCC
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSNS 138 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g-rvpViagvg~~s 138 (359)
.|+-...++-| +.|.-..+.-..-++. ++.|++-|=+.-.-|..-+=.+++-.+-+..+++.+++ .+|||.-++-.+
T Consensus 49 ~gv~v~tvigF-P~G~~~~~~k~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt 126 (226)
T 1vcv_A 49 RKVKLCVVADF-PFGALPTASRIALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLR 126 (226)
T ss_dssp SSSEEEEEEST-TTCCSCHHHHHHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCC
T ss_pred CCCeEEEEeCC-CCCCCchHHHHHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCC
Confidence 34555566777 5777888888888999 99999998777777755444567766777777777654 589999999889
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCC
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYY 164 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y 164 (359)
.++-+..++.+.++|||.|=..+=|.
T Consensus 127 ~eei~~a~~ia~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 127 DEERYTLYDIIAEAGAHFIKSSTGFA 152 (226)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCC
Confidence 89999999999999999887765444
No 122
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=91.81 E-value=1.4 Score=42.66 Aligned_cols=35 Identities=6% Similarity=-0.116 Sum_probs=15.9
Q ss_pred HHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018253 147 EQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM 182 (359)
Q Consensus 147 ~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a 182 (359)
++|++.|.+ +.+.+|+-.+.+.+.+.+.++++.++
T Consensus 135 ~~a~~~g~~-v~~~~ed~~r~~~~~~~~~~~~~~~~ 169 (370)
T 3rmj_A 135 KIAREYTDD-VEFSCEDALRSEIDFLAEICGAVIEA 169 (370)
T ss_dssp HHHTTTCSC-EEEEEETGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCE-EEEecCCCCccCHHHHHHHHHHHHHc
Confidence 334444443 33334444444555555555555444
No 123
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=91.76 E-value=1.6 Score=41.01 Aligned_cols=108 Identities=15% Similarity=0.081 Sum_probs=73.4
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC-CC
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-NS 138 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~-~s 138 (359)
.|+..-+-||....-..|.+.+...++.-.+.|+|.|=+. .|+|. ++.+++. .++||++-=|. .+
T Consensus 170 ~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~-~t~e~-----------~~~vv~~--~~vPVv~~GG~~~~ 235 (295)
T 3glc_A 170 VGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY-YVEKG-----------FERIVAG--CPVPIVIAGGKKLP 235 (295)
T ss_dssp TTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE-CCTTT-----------HHHHHHT--CSSCEEEECCSCCC
T ss_pred cCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC-CCHHH-----------HHHHHHh--CCCcEEEEECCCCC
Confidence 4544444455433323566667777777778999977665 34431 3444443 36888763332 26
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHh
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS 181 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~ 181 (359)
.+++++.++.+.++||+++.+.-=.|..+++..+.+-++.+..
T Consensus 236 ~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp~~~~~al~~ivh 278 (295)
T 3glc_A 236 EREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVH 278 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEEeHHHHhcCcCHHHHHHHHHHHHh
Confidence 8999999999999999999998877877888888888887754
No 124
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=91.76 E-value=2.5 Score=37.75 Aligned_cols=83 Identities=13% Similarity=-0.036 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcE--EEEecCCCCHHHHHHHHHHHHhCCCC
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVK--VIGNTGSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvp--Viagvg~~st~~ai~la~~a~~~Gad 155 (359)
.+.-...++..++.|+++|=+.-..|-......++-.+.++.+++.++ .++ +|.-.+..+.++..+.++.++++|+|
T Consensus 69 ~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad 147 (225)
T 1mzh_A 69 TSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGAD 147 (225)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCS
T ss_pred hhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 444445567788999999863222222222344566666777777665 232 24334556778899999999999999
Q ss_pred EEEEcC
Q 018253 156 AALHIN 161 (359)
Q Consensus 156 av~v~p 161 (359)
++-...
T Consensus 148 ~I~tst 153 (225)
T 1mzh_A 148 FIKTST 153 (225)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 994443
No 125
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=91.64 E-value=0.87 Score=43.61 Aligned_cols=85 Identities=13% Similarity=0.102 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHH-------HHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDE-------HIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQ 148 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~E-------r~~li~~~v~~~~grvpViagvg~~st~~ai~la~~ 148 (359)
...+.+..+++.+.+.|+++|.+-|.+.+. .++..+ ..++++.+.+.+ +++|||++=+=.+.+++.+..
T Consensus 141 ~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~-g~~g~~~~~~~~~~~~~i~~ik~~~-~~iPVianGgI~s~eda~~~l-- 216 (350)
T 3b0p_A 141 ETYRGLAQSVEAMAEAGVKVFVVHARSALL-ALSTKANREIPPLRHDWVHRLKGDF-PQLTFVTNGGIRSLEEALFHL-- 216 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHH--
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEecCchhc-ccCcccccCCCcccHHHHHHHHHhC-CCCeEEEECCcCCHHHHHHHH--
Confidence 346678888999999999999998766432 112111 234566666655 368999865545677766654
Q ss_pred HHhCCCCEEEEcCCCCCCC
Q 018253 149 GFAVGMHAALHINPYYGKT 167 (359)
Q Consensus 149 a~~~Gadav~v~pP~y~~~ 167 (359)
+ |||+||+--+.+..|
T Consensus 217 --~-GaD~V~iGRa~l~~P 232 (350)
T 3b0p_A 217 --K-RVDGVMLGRAVYEDP 232 (350)
T ss_dssp --T-TSSEEEECHHHHHCG
T ss_pred --h-CCCEEEECHHHHhCc
Confidence 3 899999998776544
No 126
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=91.41 E-value=0.61 Score=41.41 Aligned_cols=87 Identities=16% Similarity=0.176 Sum_probs=55.4
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcC--CCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQ--LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~--~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v 159 (359)
...++.+.+.|++.+++.+.+-++. .... +.++.+.+.. ++||+++=|-.+.+++.++. ++|||++++
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~----~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~----~~Ga~~v~v 226 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDV----ELIRRVADSV--RIPVIASGGAGRVEHFYEAA----AAGADAVLA 226 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCH----HHHHHHHHHC--SSCEEEESCCCSHHHHHHHH----HTTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCH----HHHHHHHHhc--CCCEEEeCCCCCHHHHHHHH----HcCCcHHHH
Confidence 3446667788999998866443222 2222 3344444443 68999875554555555543 589999999
Q ss_pred cCCCCCCC-CHHHHHHHHHH
Q 018253 160 INPYYGKT-SLEGLISHFDS 178 (359)
Q Consensus 160 ~pP~y~~~-s~~~l~~yf~~ 178 (359)
..-.+... +.+++.+++++
T Consensus 227 gsal~~~~~~~~~~~~~l~~ 246 (253)
T 1h5y_A 227 ASLFHFRVLSIAQVKRYLKE 246 (253)
T ss_dssp SHHHHTTSSCHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHH
Confidence 98776543 66777777653
No 127
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=91.22 E-value=1.5 Score=40.15 Aligned_cols=76 Identities=14% Similarity=0.224 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC--------CHHHHHHHHHHHHh
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN--------STREAIHATEQGFA 151 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~--------st~~ai~la~~a~~ 151 (359)
.++++++++-+.|.+.+=+.-.|-+ |+.++|.++++.+.+. ...|+.-+|.- +..+-|+++++.-+
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~---l~~~~~~~~I~~~~~~---G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~Le 159 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSD---ISLEERNNAIKRAKDN---GFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLD 159 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSC---CCHHHHHHHHHHHHHT---TCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCccc---CCHHHHHHHHHHHHHC---CCEEeeeccccCCcccCCCCHHHHHHHHHHHHH
Confidence 6777888888888888877655544 8899999999988763 35667766654 45888999999999
Q ss_pred CCCCEEEEcC
Q 018253 152 VGMHAALHIN 161 (359)
Q Consensus 152 ~Gadav~v~p 161 (359)
+||+.||+-.
T Consensus 160 AGA~~ViiEa 169 (251)
T 1qwg_A 160 AGADYVIIEG 169 (251)
T ss_dssp HTCSEEEECC
T ss_pred CCCcEEEEee
Confidence 9999999864
No 128
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=91.20 E-value=0.86 Score=44.06 Aligned_cols=70 Identities=10% Similarity=-0.044 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCCEE
Q 018253 79 EAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAA 157 (359)
Q Consensus 79 ~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag-vg~~st~~ai~la~~a~~~Gadav 157 (359)
+...+.++.++++|++.|.+-.+.|-. +.-.+.++.+.+... ++||++| +.+ .+.++.+.++|||++
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~~-----~~~~e~I~~ir~~~~-~~~Vi~G~V~T------~e~A~~a~~aGaD~I 166 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAHA-----KYVGKTLKSLRQLLG-SRCIMAGNVAT------YAGADYLASCGADII 166 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCSS-----HHHHHHHHHHHHHHT-TCEEEEEEECS------HHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCCc-----HhHHHHHHHHHHhcC-CCeEEEcCcCC------HHHHHHHHHcCCCEE
Confidence 445677999999999988875555531 223456666666654 6899996 542 345778889999999
Q ss_pred EEc
Q 018253 158 LHI 160 (359)
Q Consensus 158 ~v~ 160 (359)
.+.
T Consensus 167 ~Vg 169 (361)
T 3r2g_A 167 KAG 169 (361)
T ss_dssp EEC
T ss_pred EEc
Confidence 984
No 129
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=91.18 E-value=5 Score=36.41 Aligned_cols=125 Identities=15% Similarity=0.074 Sum_probs=87.3
Q ss_pred ceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCC-cEEEEecCCCCH
Q 018253 61 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGAS-VKVIGNTGSNST 139 (359)
Q Consensus 61 Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~gr-vpViagvg~~st 139 (359)
++-.+.++=| +-|....+.-..-++.-++.|++-|=+-=..|+.-.=.+++-.+-++.+++.+++. ++||.=++-.+.
T Consensus 78 ~v~v~tVigF-P~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~ 156 (239)
T 3ngj_A 78 GVKVCTVIGF-PLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTN 156 (239)
T ss_dssp SCEEEEEEST-TTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCH
T ss_pred CCeEEEEecc-CCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCH
Confidence 4455555566 46777778888889999999999987777777655555666667777777776543 788888888888
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCC-CCCCHHHHHHHHHHHHhcCCeE
Q 018253 140 REAIHATEQGFAVGMHAALHINPYY-GKTSLEGLISHFDSVLSMGPTI 186 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~y-~~~s~~~l~~yf~~Ia~a~Pii 186 (359)
++-++.++.+.++|||.|=..+=|- ...+.+++..+-+.+...++|-
T Consensus 157 eei~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~~v~VK 204 (239)
T 3ngj_A 157 EEKVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGDKALVK 204 (239)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGGGSEEE
T ss_pred HHHHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCCCceEE
Confidence 8888888999999999887765553 3356665554444332223443
No 130
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=91.06 E-value=1.1 Score=41.18 Aligned_cols=94 Identities=12% Similarity=0.104 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE--ecCCCCHHHHHHHHHHHHhCCC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia--gvg~~st~~ai~la~~a~~~Ga 154 (359)
+.+......+-..+.|+|.+-+. ++| +. +.++.+++.+ +.+||++ |+...+.+++++.++.+.++||
T Consensus 157 s~~~i~~a~~~a~~~GAD~vkt~-~~~-----~~----e~~~~~~~~~-~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA 225 (263)
T 1w8s_A 157 APEIVAYAARIALELGADAMKIK-YTG-----DP----KTFSWAVKVA-GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGA 225 (263)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE-CCS-----SH----HHHHHHHHHT-TTSCEEEECCSCCSSHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc-CCC-----CH----HHHHHHHHhC-CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 45666666677778999976654 442 33 3345555555 4446655 5544489999999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHh
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLS 181 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~ 181 (359)
+++.+..-.+..+++....+-+.++.+
T Consensus 226 ~GvsvgraI~~~~dp~~~~~~l~~~v~ 252 (263)
T 1w8s_A 226 LGIAVGRNVWQRRDALKFARALAELVY 252 (263)
T ss_dssp CEEEESHHHHTSTTHHHHHHHHHHHHC
T ss_pred eEEEEehhhcCCcCHHHHHHHHHHHHh
Confidence 999998877877888887777777664
No 131
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=91.01 E-value=3.4 Score=40.35 Aligned_cols=128 Identities=17% Similarity=0.159 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCcc----------------CcCCCCHHHHHHH----HHHHHHhhCCCcEEEEecCC--
Q 018253 79 EAYDDLVNMQIVNGAEGMIVGGTTG----------------EGQLMSWDEHIML----IGHTVNCFGASVKVIGNTGS-- 136 (359)
Q Consensus 79 ~~l~~li~~li~~Gv~Gl~v~GstG----------------E~~~LT~~Er~~l----i~~~v~~~~grvpViagvg~-- 136 (359)
+.+.+-..+..++|.|||=+.+..| |+ -=|.+.|.++ ++.+++.++.. ||.+=++.
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~y-GGslenR~rf~~Eiv~aVr~avg~~-~V~vRls~~~ 248 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEY-GGSLANRCKFITQVVQAVVSAIGAD-RVGVRVSPAI 248 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTT-SSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECSSC
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCcc-CcChhhhhHHHHHHHHHHHHHhCCC-cEEEEecccc
Confidence 4555666667789999999988643 22 2346777554 44555555544 77665443
Q ss_pred --------CCHHHHHHHHHHHHhCC------CCEEEEcCCCCCC----C----C-HHHHHHHHHHHHhc--CCeEEEeCC
Q 018253 137 --------NSTREAIHATEQGFAVG------MHAALHINPYYGK----T----S-LEGLISHFDSVLSM--GPTIIYNVP 191 (359)
Q Consensus 137 --------~st~~ai~la~~a~~~G------adav~v~pP~y~~----~----s-~~~l~~yf~~Ia~a--~PiiiYn~P 191 (359)
.+.++++++++.+++.| +|++-+..+.+.. + + ...-..+.+.|.+. .||+. +
T Consensus 249 ~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~-~-- 325 (402)
T 2hsa_B 249 DHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFIC-S-- 325 (402)
T ss_dssp CSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEE-E--
T ss_pred ccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEE-e--
Confidence 24678999999999999 9999998765421 2 1 11234555566655 57664 2
Q ss_pred CCCCCCCCHHHHHHHhcC--CCeEEE
Q 018253 192 SRTGQDIPPRVIHTMAQS--PNLAGV 215 (359)
Q Consensus 192 ~~tg~~ls~e~l~~La~~--pnivGi 215 (359)
.| ++++..+++.+. -.+|++
T Consensus 326 --G~--i~~~~a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 326 --GG--YTRELGIEAVAQGDADLVSY 347 (402)
T ss_dssp --SS--CCHHHHHHHHHTTSCSEEEE
T ss_pred --CC--CCHHHHHHHHHCCCCceeee
Confidence 23 388988887743 345544
No 132
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=90.98 E-value=7.3 Score=33.77 Aligned_cols=158 Identities=11% Similarity=0.069 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gad 155 (359)
.|.+.+.+.++.+.+.|++.|-+.-.+.+ . .+.++...+.. .+++++|.+..... +.++.|.++|||
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~~~-----~---~~~i~~i~~~~--~~~l~vg~g~~~~~---~~i~~a~~~Gad 82 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNSPQ-----W---EQSIPAIVDAY--GDKALIGAGTVLKP---EQVDALARMGCQ 82 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTSTT-----H---HHHHHHHHHHH--TTTSEEEEECCCSH---HHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCChh-----H---HHHHHHHHHhC--CCCeEEEeccccCH---HHHHHHHHcCCC
Confidence 47788999999999999999877544322 1 23444444444 35677766544433 367788889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhc-CCCeEEEeccC--chhhHhh---hhC
Q 018253 156 AALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAGVKECV--GNDRVEH---YTG 229 (359)
Q Consensus 156 av~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~La~-~pnivGiK~ss--~d~~l~~---~~~ 229 (359)
++.+ |. .+ .++.+..+... .++++ + .-+++.+.+..+ -...+++..+. +-..+.+ ...
T Consensus 83 ~V~~--~~---~~-~~~~~~~~~~g--~~~~~----g----~~t~~e~~~a~~~G~d~v~v~~t~~~g~~~~~~l~~~~~ 146 (212)
T 2v82_A 83 LIVT--PN---IH-SEVIRRAVGYG--MTVCP----G----CATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLP 146 (212)
T ss_dssp EEEC--SS---CC-HHHHHHHHHTT--CEEEC----E----ECSHHHHHHHHHTTCSEEEETTHHHHCHHHHHHHHTTSC
T ss_pred EEEe--CC---CC-HHHHHHHHHcC--CCEEe----e----cCCHHHHHHHHHCCCCEEEEecCCCCCHHHHHHHHHhcc
Confidence 9962 22 12 33333322211 23321 1 124554444333 34555552211 1122322 222
Q ss_pred CceEEE--ecCCchhhhhhhhcCCceeeccccccc
Q 018253 230 NGIVVW--SGNDDQCHDARWNHGATGVISVTSNLV 262 (359)
Q Consensus 230 ~~~~v~--~G~d~~~~~~~l~~Ga~G~is~~an~~ 262 (359)
.++.++ .|-...-+...+..|++|++.+.+.+-
T Consensus 147 ~~ipvia~GGI~~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 147 SDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp TTCEEEEESSCCTTTHHHHHHHTCSEEEECTTTCC
T ss_pred CCCeEEEeCCCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 134443 344333334456789999998876553
No 133
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=90.93 E-value=0.61 Score=43.68 Aligned_cols=101 Identities=15% Similarity=0.136 Sum_probs=79.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 152 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~ 152 (359)
++..|.+-+.++++.+.+.|++-|.+.-|.|- +++++-.++++.+.+.++ .+|+-++. +++..-+++.+..|.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~---~~P~~~~~lv~~l~~~~~-~~~l~~H~-Hn~~Gla~An~laAv~a 227 (302)
T 2ftp_A 153 DGDVDPRQVAWVARELQQMGCYEVSLGDTIGV---GTAGATRRLIEAVASEVP-RERLAGHF-HDTYGQALANIYASLLE 227 (302)
T ss_dssp TBCCCHHHHHHHHHHHHHTTCSEEEEEESSSC---CCHHHHHHHHHHHTTTSC-GGGEEEEE-BCTTSCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---cCHHHHHHHHHHHHHhCC-CCeEEEEe-CCCccHHHHHHHHHHHh
Confidence 46899999999999999999999999988885 799999999999888764 57877765 45666677888888999
Q ss_pred CCCEEEEcCC------C----CCCCCHHHHHHHHHH
Q 018253 153 GMHAALHINP------Y----YGKTSLEGLISHFDS 178 (359)
Q Consensus 153 Gadav~v~pP------~----y~~~s~~~l~~yf~~ 178 (359)
|++.+=..-- | ....+-|+++.+++.
T Consensus 228 Ga~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~ 263 (302)
T 2ftp_A 228 GIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNG 263 (302)
T ss_dssp TCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHH
T ss_pred CCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHh
Confidence 9999866543 1 223556777766663
No 134
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=90.91 E-value=0.43 Score=45.06 Aligned_cols=115 Identities=12% Similarity=0.142 Sum_probs=86.9
Q ss_pred CCceE--EeeecCCC--CCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec
Q 018253 59 ALRLI--TAIKTPYL--PDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT 134 (359)
Q Consensus 59 ~~Gi~--~al~TPF~--~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv 134 (359)
-.|+. ..+.+-|. .+++.|.+-+.++++.+.+.|++-|.+.-|.| .+++++-.++++.+.+.++ .+|+=++.
T Consensus 133 ~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~v~~lv~~l~~~~~-~~~l~~H~ 208 (307)
T 1ydo_A 133 KANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIG---AANPAQVETVLEALLARFP-ANQIALHF 208 (307)
T ss_dssp HTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSC---CCCHHHHHHHHHHHHTTSC-GGGEEEEC
T ss_pred HCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC---CcCHHHHHHHHHHHHHhCC-CCeEEEEE
Confidence 45543 34444443 24789999999999999999999999999999 5899999999999988764 46765554
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCC------C----CCCCCHHHHHHHHHH
Q 018253 135 GSNSTREAIHATEQGFAVGMHAALHINP------Y----YGKTSLEGLISHFDS 178 (359)
Q Consensus 135 g~~st~~ai~la~~a~~~Gadav~v~pP------~----y~~~s~~~l~~yf~~ 178 (359)
+++..-++..+..|.++||+.+=..-- | ....+-|+++..++.
T Consensus 209 -Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~ 261 (307)
T 1ydo_A 209 -HDTRGTALANMVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQ 261 (307)
T ss_dssp -BGGGSCHHHHHHHHHHHTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHH
T ss_pred -CCCCchHHHHHHHHHHhCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHh
Confidence 567778888899999999998866543 2 233556777776653
No 135
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=90.80 E-value=5.7 Score=38.17 Aligned_cols=125 Identities=14% Similarity=0.133 Sum_probs=79.2
Q ss_pred CCCHHHHHHHHHH-------HHHCCCCEEEEccCcc----------------CcCCCCHHHHHHHHH----HHHHhhCCC
Q 018253 75 RFDLEAYDDLVNM-------QIVNGAEGMIVGGTTG----------------EGQLMSWDEHIMLIG----HTVNCFGAS 127 (359)
Q Consensus 75 ~ID~~~l~~li~~-------li~~Gv~Gl~v~GstG----------------E~~~LT~~Er~~li~----~~v~~~~gr 127 (359)
.+..+.++++++. ..++|.|||=+.+..| |+ -=|.+-|.+++. .+++.++..
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~y-GGslenR~rf~~eiv~aVr~~vg~~ 220 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRY-GGSLENRARLLLEVTDAAIEVWGAQ 220 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTT-SSSHHHHHHHHHHHHHHHHHHHCGG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCC-CCchhhHHHHHHHHHHHHHHhcCCC
Confidence 3555555555554 4579999999998763 11 125666765544 444555545
Q ss_pred cEEEEecCCC----------CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCC
Q 018253 128 VKVIGNTGSN----------STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTG 195 (359)
Q Consensus 128 vpViagvg~~----------st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg 195 (359)
||.+=++.. +.++++++++..+++|+|.+-+..+.... .+.+.|.+. .||+.= |
T Consensus 221 -~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-------~~~~~ik~~~~iPvi~~------G 286 (362)
T 4ab4_A 221 -RVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREADD-------SIGPLIKEAFGGPYIVN------E 286 (362)
T ss_dssp -GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTT-------CCHHHHHHHHCSCEEEE------S
T ss_pred -ceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCH-------HHHHHHHHHCCCCEEEe------C
Confidence 777655432 25679999999999999999888775321 233444443 576643 2
Q ss_pred CCCCHHHHHHHhcC--CCeEEE
Q 018253 196 QDIPPRVIHTMAQS--PNLAGV 215 (359)
Q Consensus 196 ~~ls~e~l~~La~~--pnivGi 215 (359)
.++++..+++.+. -.+|++
T Consensus 287 -git~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 287 -RFDKASANAALASGKADAVAF 307 (362)
T ss_dssp -SCCHHHHHHHHHTTSCSEEEE
T ss_pred -CCCHHHHHHHHHcCCccEEEE
Confidence 2489988887743 345554
No 136
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=90.74 E-value=1 Score=42.88 Aligned_cols=97 Identities=13% Similarity=-0.004 Sum_probs=47.0
Q ss_pred HHHHHHCCCCEEEEccCccCcC-----CCCHHHHHHHHHHHHHhhC-CCcEEEEecCC------CCHHHHHHHHHHHHhC
Q 018253 85 VNMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFG-ASVKVIGNTGS------NSTREAIHATEQGFAV 152 (359)
Q Consensus 85 i~~li~~Gv~Gl~v~GstGE~~-----~LT~~Er~~li~~~v~~~~-grvpViagvg~------~st~~ai~la~~a~~~ 152 (359)
++..+++|++.+-+..++.|.+ ..|.+|-.+.++.+++.+. ....|.+++.. .+.+..+++++.+.++
T Consensus 102 i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (337)
T 3ble_A 102 VDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKE 181 (337)
T ss_dssp HHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTS
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHc
Confidence 4445556666666666655542 3455555444444444322 12334433322 2345555566666666
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018253 153 GMHAALHINPYYGKTSLEGLISHFDSVLSM 182 (359)
Q Consensus 153 Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a 182 (359)
|+|.+.+.- .....+++++.+.++.+.+.
T Consensus 182 Ga~~i~l~D-T~G~~~P~~v~~lv~~l~~~ 210 (337)
T 3ble_A 182 HIERIFLPD-TLGVLSPEETFQGVDSLIQK 210 (337)
T ss_dssp CCSEEEEEC-TTCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEec-CCCCcCHHHHHHHHHHHHHh
Confidence 665544432 22334455555555555543
No 137
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=90.73 E-value=2.3 Score=38.11 Aligned_cols=182 Identities=15% Similarity=0.118 Sum_probs=107.4
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
..++++.+.. .|.+....+.+-|++.|++.+=+.-+| +.-.+.++...+..+. +++|+|.--
T Consensus 12 ~~~vi~Vir~-------~~~~~a~~~a~al~~gGi~~iEvt~~t--------~~a~~~I~~l~~~~p~---~~IGAGTVl 73 (217)
T 3lab_A 12 TKPLIPVIVI-------DDLVHAIPMAKALVAGGVHLLEVTLRT--------EAGLAAISAIKKAVPE---AIVGAGTVC 73 (217)
T ss_dssp SCSEEEEECC-------SCGGGHHHHHHHHHHTTCCEEEEETTS--------TTHHHHHHHHHHHCTT---SEEEEECCC
T ss_pred hCCEEEEEEc-------CCHHHHHHHHHHHHHcCCCEEEEeCCC--------ccHHHHHHHHHHHCCC---CeEeecccc
Confidence 4677776532 455778899999999999998774443 3456777777777743 355666544
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHh--c--CCeEEEeCCCCCCCCCCHHHHHHHhcC-CCeE
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS--M--GPTIIYNVPSRTGQDIPPRVIHTMAQS-PNLA 213 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~--a--~PiiiYn~P~~tg~~ls~e~l~~La~~-pniv 213 (359)
+.+.++.|.++||+.++. |.+ ..+++++.++.-- . .|++ .|+ .+++.+.+-.+. ..+
T Consensus 74 ---t~~~a~~ai~AGA~fivs--P~~----~~evi~~~~~~~v~~~~~~~~~-------PG~-~TptE~~~A~~~Gad~- 135 (217)
T 3lab_A 74 ---TADDFQKAIDAGAQFIVS--PGL----TPELIEKAKQVKLDGQWQGVFL-------PGV-ATASEVMIAAQAGITQ- 135 (217)
T ss_dssp ---SHHHHHHHHHHTCSEEEE--SSC----CHHHHHHHHHHHHHCSCCCEEE-------EEE-CSHHHHHHHHHTTCCE-
T ss_pred ---CHHHHHHHHHcCCCEEEe--CCC----cHHHHHHHHHcCCCccCCCeEe-------CCC-CCHHHHHHHHHcCCCE-
Confidence 467788899999997765 443 3567777665321 0 1333 254 666655554432 344
Q ss_pred EEeccCch----h-hHhhhhC--CceEEE--ecCCchhhhhhhhcCCceeecccccccHHHHHHHHHcCCcHHHHHH
Q 018253 214 GVKECVGN----D-RVEHYTG--NGIVVW--SGNDDQCHDARWNHGATGVISVTSNLVPGMMRELMFGGKNPSLNTK 281 (359)
Q Consensus 214 GiK~ss~d----~-~l~~~~~--~~~~v~--~G~d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l~~ag~a~~l~~~ 281 (359)
+|..-.. . .++.+.. +++.++ .|-+..-+..++..|+..++.| +.+.|... .++|+..++.++
T Consensus 136 -vK~FPa~~~gG~~~lkal~~p~p~i~~~ptGGI~~~N~~~~l~aGa~~~vgG-s~l~~~~~---i~~~~~~~i~~~ 207 (217)
T 3lab_A 136 -LKCFPASAIGGAKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLPNVICAGG-SWLTESKL---LIEGDWNEVTRR 207 (217)
T ss_dssp -EEETTTTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHSTTBCCEEE-SGGGCHHH---HHHTCHHHHHHH
T ss_pred -EEECccccccCHHHHHHHHhhhcCceEEEeCCCCHHHHHHHHHCCCEEEEEC-hhhcChhH---HhcCCHHHHHHH
Confidence 3543322 2 2333322 344443 3655555566788898766554 55665432 345554444443
No 138
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=90.69 E-value=0.63 Score=45.06 Aligned_cols=67 Identities=13% Similarity=0.280 Sum_probs=47.8
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v 159 (359)
...++.+++.|++.|.+..+.|- .++..+.++.+.+.. +.+||++|... + .+.++.+.++|||++.+
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~-----~~~~~~~I~~ik~~~-p~v~Vi~G~v~-t----~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGH-----SEGVLQRIRETRAAY-PHLEIIGGNVA-T----AEGARALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT-----SHHHHHHHHHHHHHC-TTCEEEEEEEC-S----HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCCCC-----CHHHHHHHHHHHHhc-CCCceEeeeeC-C----HHHHHHHHHcCCCEEEE
Confidence 45677889999999887654442 245666777777766 36899887332 2 44567778899999998
No 139
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=90.63 E-value=3.3 Score=41.03 Aligned_cols=110 Identities=14% Similarity=0.079 Sum_probs=78.2
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHh----hCCCcEEEEecCCCCHHHH
Q 018253 67 KTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSNSTREA 142 (359)
Q Consensus 67 ~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~----~~grvpViagvg~~st~~a 142 (359)
-|-+++.--+.-+.+.+.+-.+...|+|=+====.-+....+.++||...+-.+++. ++.+.--.+++++. ++|.
T Consensus 159 gtiiKPklGLs~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiTa~-~~eM 237 (444)
T 3kdn_A 159 GVVPKPKVGYSPEEFEKLAYDLLSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDKVENETGEKKTWFANITAD-LLEM 237 (444)
T ss_dssp EECCSSSSCCCHHHHHHHHHHHHHTTCCEEECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCSS-HHHH
T ss_pred EeecCcccCCCHHHHHHHHHHHHhcCCceeecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEeecCCC-HHHH
Confidence 344455445899999999999999999954222244567789999999887776664 34444457799986 9999
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCCCCC-HHHHHHHHHH
Q 018253 143 IHATEQGFAVGMHAALHINPYYGKTS-LEGLISHFDS 178 (359)
Q Consensus 143 i~la~~a~~~Gadav~v~pP~y~~~s-~~~l~~yf~~ 178 (359)
+++++.|.++|++++|+-. +....+ -..+.+|++.
T Consensus 238 ~~Ra~~a~e~G~~~~mvd~-~~~G~~a~~~l~~~~~~ 273 (444)
T 3kdn_A 238 EQRLEVLADLGLKHAMVDV-VITGWGALRYIRDLAAD 273 (444)
T ss_dssp HHHHHHHHHHTCCEEEEEH-HHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcc-ccccHHHHHHHHHhccc
Confidence 9999999999999988863 222222 3445555553
No 140
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=90.53 E-value=1.5 Score=42.02 Aligned_cols=84 Identities=11% Similarity=0.062 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc----------cCcCCCCHHHHHHHHHHHHHhhCCCcEEEE----ecCCC-CHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTT----------GEGQLMSWDEHIMLIGHTVNCFGASVKVIG----NTGSN-STRE 141 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~Gst----------GE~~~LT~~Er~~li~~~v~~~~grvpVia----gvg~~-st~~ 141 (359)
|.+.+.+.++.+.+.|+++|=+++.. |-...-..+--.++++.+.+.+ .+||.+ |.... +.++
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v--~~PV~vKiR~g~~~~~~~~~ 145 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV--RVPVTVKMRLGLEGKETYRG 145 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC--SSCEEEEEESCBTTCCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh--CCceEEEEecCcCccccHHH
Confidence 56889999999999999999998641 2222224444556667766655 478888 33222 3468
Q ss_pred HHHHHHHHHhCCCCEEEEcCC
Q 018253 142 AIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~pP 162 (359)
++++++.++++|+|++.+..-
T Consensus 146 ~~~~a~~l~~aG~d~I~V~~r 166 (350)
T 3b0p_A 146 LAQSVEAMAEAGVKVFVVHAR 166 (350)
T ss_dssp HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHHHHHcCCCEEEEecC
Confidence 999999999999999998653
No 141
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=90.48 E-value=1.6 Score=40.64 Aligned_cols=102 Identities=16% Similarity=0.048 Sum_probs=70.3
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCC
Q 018253 126 ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRT 194 (359)
Q Consensus 126 grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p---------P~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~t 194 (359)
++.-++.++.... .|+.++++|+|++++-. |.-...|.++++.|-+.|++. .|+++=|.|. -
T Consensus 16 g~~i~~~tayDa~------sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pf-g 88 (275)
T 1o66_A 16 GEKIAMLTAYESS------FAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPF-G 88 (275)
T ss_dssp TCCEEEEECCSHH------HHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCT-T
T ss_pred CCcEEEEeCcCHH------HHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCC-C
Confidence 4434555666533 46677789999998743 233446789999999999986 4788899994 4
Q ss_pred CCCCCHHHHH----HHhcCCCeEEEeccCch---hhHhhhhCCceEEE
Q 018253 195 GQDIPPRVIH----TMAQSPNLAGVKECVGN---DRVEHYTGNGIVVW 235 (359)
Q Consensus 195 g~~ls~e~l~----~La~~pnivGiK~ss~d---~~l~~~~~~~~~v~ 235 (359)
++..+++... +|.+ -...|+|.+.+. .+++.....++.|+
T Consensus 89 sy~~s~~~a~~na~rl~k-aGa~aVklEdg~e~~~~I~al~~agIpV~ 135 (275)
T 1o66_A 89 AYQQSKEQAFAAAAELMA-AGAHMVKLEGGVWMAETTEFLQMRGIPVC 135 (275)
T ss_dssp SSSSCHHHHHHHHHHHHH-TTCSEEEEECSGGGHHHHHHHHHTTCCEE
T ss_pred CccCCHHHHHHHHHHHHH-cCCcEEEECCcHHHHHHHHHHHHcCCCeE
Confidence 6667775443 6777 889999988775 24555544444444
No 142
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=90.44 E-value=7.1 Score=34.58 Aligned_cols=129 Identities=8% Similarity=-0.002 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHCCCCEEEEccCc-------cC--cCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHH
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTT-------GE--GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGF 150 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~Gst-------GE--~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~ 150 (359)
.+...++.+.+.|.++|=+.... |. ...++.++..++-+...+ .+=++..+......+.++..+.++.|+
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~~~~~~~~~~~~~~~i~~A~ 101 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAAS-KGIKIVGTGVYVAEKSSDWEKMFKFAK 101 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHH-TTCEEEEEEEECCSSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHH-cCCeEEEEeccCCccHHHHHHHHHHHH
Confidence 36778888889999999887643 22 245677777777655443 332333332233346677788888899
Q ss_pred hCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEec
Q 018253 151 AVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKE 217 (359)
Q Consensus 151 ~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ 217 (359)
++|++.+.+.|. .+. .+....+++. +.+.+-|.|..+ ..-+++.+.++.+ .|++.-.=|
T Consensus 102 ~lGa~~v~~~~~------~~~-~~~l~~~a~~~gv~l~~En~~~~~-~~~~~~~~~~ll~~~~~~~g~~~D 164 (262)
T 3p6l_A 102 AMDLEFITCEPA------LSD-WDLVEKLSKQYNIKISVHNHPQPS-DYWKPENLLKAISGRSQSLGSCSD 164 (262)
T ss_dssp HTTCSEEEECCC------GGG-HHHHHHHHHHHTCEEEEECCSSSS-SSSSHHHHHHHHTTSCTTEEEEEE
T ss_pred HcCCCEEEecCC------HHH-HHHHHHHHHHhCCEEEEEeCCCcc-ccCCHHHHHHHHHhCCCceEEEec
Confidence 999998888643 122 2333334443 578888887532 2237888888874 577643334
No 143
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=90.43 E-value=0.91 Score=43.87 Aligned_cols=73 Identities=18% Similarity=0.178 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCcc------------------------------Cc-----------CCCCHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTG------------------------------EG-----------QLMSWDEHIM 115 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstG------------------------------E~-----------~~LT~~Er~~ 115 (359)
|.+...+.+++..+.|++++.+.-.+. ++ ..++++
T Consensus 144 d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~---- 219 (368)
T 2nli_A 144 DDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPR---- 219 (368)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHH----
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHH----
Confidence 678888888888889988876554321 11 234433
Q ss_pred HHHHHHHhhCCCcEEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 116 LIGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 116 li~~~v~~~~grvpVia-gvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
.++.+++.+ ++||++ |+ .+ .+.++.+.++|+|++.+..
T Consensus 220 ~i~~lr~~~--~~PvivK~v--~~----~e~a~~a~~~Gad~I~vs~ 258 (368)
T 2nli_A 220 DIEEIAGHS--GLPVFVKGI--QH----PEDADMAIKRGASGIWVSN 258 (368)
T ss_dssp HHHHHHHHS--SSCEEEEEE--CS----HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHc--CCCEEEEcC--CC----HHHHHHHHHcCCCEEEEcC
Confidence 366666655 578888 55 23 4567888999999999964
No 144
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=90.29 E-value=1.5 Score=40.89 Aligned_cols=120 Identities=13% Similarity=0.090 Sum_probs=70.2
Q ss_pred CCceEEeeecCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-CccCc--CCCCHHHHHHHHHHHHHhhCCCcEEEEec
Q 018253 59 ALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEG--QLMSWDEHIMLIGHTVNCFGASVKVIGNT 134 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~-ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~--~~LT~~Er~~li~~~v~~~~grvpViagv 134 (359)
..||+-..+=-|.+.|. .|.+...++++.+++.|++-|=++| ||.-+ .--..+|..+++..+......++||.+-+
T Consensus 8 imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT 87 (280)
T 1eye_A 8 VMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDT 87 (280)
T ss_dssp EEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeC
Confidence 45666543333877675 6899999999999999999999998 54322 33346677777755544333367776655
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 135 GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 135 g~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
.. . +-++.|.++|++-+--+.-... . + +-+..+++. .|+++-+.
T Consensus 88 ~~--~----~va~aAl~aGa~iINdvsg~~~--d-~---~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 88 MR--A----DVARAALQNGAQMVNDVSGGRA--D-P---AMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp SC--H----HHHHHHHHTTCCEEEETTTTSS--C-T---THHHHHHHHTCCEEEECC
T ss_pred CC--H----HHHHHHHHcCCCEEEECCCCCC--C-H---HHHHHHHHhCCeEEEEcC
Confidence 43 2 3345566679987766543211 1 2 234444554 78888775
No 145
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=90.10 E-value=9.7 Score=33.78 Aligned_cols=175 Identities=13% Similarity=0.090 Sum_probs=95.0
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEc------cCccCc----------CCCCHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018253 72 PDGRFDLEAYDDLVNMQIVNGAEGMIVG------GTTGEG----------QLMSWDEHIMLIGHTVNCFGASVKVIGNTG 135 (359)
Q Consensus 72 ~dg~ID~~~l~~li~~li~~Gv~Gl~v~------GstGE~----------~~LT~~Er~~li~~~v~~~~grvpViagvg 135 (359)
-.+..|.+.+.+.++.+.+. ++.|-+. -.-|.+ .-.+.+.-.++++.+.+.+ ++||.++++
T Consensus 12 ~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~--~~pv~~~~~ 88 (248)
T 1geq_A 12 TAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS--STPIVLMTY 88 (248)
T ss_dssp ETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC--CCCEEEEEC
T ss_pred eCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC--CCCEEEEec
Confidence 34557778889999988888 9988877 222221 1124555567777777654 468887764
Q ss_pred CCCH--HHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CC-eEEEeCCCCCCCCCCHHHHHHHhc-CC
Q 018253 136 SNST--REAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GP-TIIYNVPSRTGQDIPPRVIHTMAQ-SP 210 (359)
Q Consensus 136 ~~st--~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~P-iiiYn~P~~tg~~ls~e~l~~La~-~p 210 (359)
.+.. ....+.++.+.++|||++.+. ... .++..++.+.+.+. .. ++..+ | .-+.+.++.+.+ .+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~---~~~~~~~~~~~~~~g~~~~~~i~-~-----~t~~e~~~~~~~~~d 157 (248)
T 1geq_A 89 YNPIYRAGVRNFLAEAKASGVDGILVV--DLP---VFHAKEFTEIAREEGIKTVFLAA-P-----NTPDERLKVIDDMTT 157 (248)
T ss_dssp HHHHHHHCHHHHHHHHHHHTCCEEEET--TCC---GGGHHHHHHHHHHHTCEEEEEEC-T-----TCCHHHHHHHHHHCS
T ss_pred cchhhhcCHHHHHHHHHHCCCCEEEEC--CCC---hhhHHHHHHHHHHhCCCeEEEEC-C-----CCHHHHHHHHHhcCC
Confidence 2211 012467888889999999984 221 12333333333333 22 33332 2 134567777763 44
Q ss_pred CeEEE---------eccC-ch--hh---HhhhhCCceEEEecCCc-hhhhhhhhcCCceeeccccc
Q 018253 211 NLAGV---------KECV-GN--DR---VEHYTGNGIVVWSGNDD-QCHDARWNHGATGVISVTSN 260 (359)
Q Consensus 211 nivGi---------K~ss-~d--~~---l~~~~~~~~~v~~G~d~-~~~~~~l~~Ga~G~is~~an 260 (359)
.++.+ |... .+ .. +++..+-.+.+-.|-.. .-+...+..|++|++.|++-
T Consensus 158 ~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai 223 (248)
T 1geq_A 158 GFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSAL 223 (248)
T ss_dssp SEEEEECCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CeEEEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHH
Confidence 34433 1100 11 12 22222333443345443 33444458899999988653
No 146
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=89.97 E-value=2.1 Score=40.42 Aligned_cols=85 Identities=12% Similarity=-0.015 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccC----cCCCCHHHHHHHHHHHHHhh-------CCCcEEEEecCC-CCHHHHHHH
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGE----GQLMSWDEHIMLIGHTVNCF-------GASVKVIGNTGS-NSTREAIHA 145 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE----~~~LT~~Er~~li~~~v~~~-------~grvpViagvg~-~st~~ai~l 145 (359)
.+.+.+.++.+.+ |+|++-++.++-- -..-..+.-.++++.+.+.+ +.++||++=++. .+.++..++
T Consensus 152 ~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~ 230 (336)
T 1f76_A 152 KDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQV 230 (336)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHH
Confidence 6777777776654 9999988764221 11112333457777777766 346899997764 456788999
Q ss_pred HHHHHhCCCCEEEEcCCC
Q 018253 146 TEQGFAVGMHAALHINPY 163 (359)
Q Consensus 146 a~~a~~~Gadav~v~pP~ 163 (359)
++.+++.|+|++.+..-.
T Consensus 231 a~~l~~~Gvd~i~vsn~~ 248 (336)
T 1f76_A 231 ADSLVRHNIDGVIATNTT 248 (336)
T ss_dssp HHHHHHTTCSEEEECCCB
T ss_pred HHHHHHcCCcEEEEeCCc
Confidence 999999999999998643
No 147
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=89.95 E-value=0.78 Score=43.63 Aligned_cols=74 Identities=14% Similarity=0.162 Sum_probs=47.4
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHH--------HHHHHHHHHHhhCCCcEEEE--ecCCCCHHHHHHHHHHHHhC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDE--------HIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAV 152 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~E--------r~~li~~~v~~~~grvpVia--gvg~~st~~ai~la~~a~~~ 152 (359)
..++.+++.|+++|.+.++.|- ...+..+ -..++..+++.+ ++|||+ |+. +..++++. ..+
T Consensus 161 e~A~~a~~aGad~Ivvs~hgG~-~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~--~g~Dv~ka----lal 231 (336)
T 1ypf_A 161 EAVRELENAGADATKVGIGPGK-VCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIR--TNGDVAKS----IRF 231 (336)
T ss_dssp HHHHHHHHHTCSEEEECSSCST-TCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCC--STHHHHHH----HHT
T ss_pred HHHHHHHHcCCCEEEEecCCCc-eeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCC--CHHHHHHH----HHc
Confidence 3567788999999998544332 1111122 244555555555 799999 554 45555543 347
Q ss_pred CCCEEEEcCCCCC
Q 018253 153 GMHAALHINPYYG 165 (359)
Q Consensus 153 Gadav~v~pP~y~ 165 (359)
|||+|++-.|+..
T Consensus 232 GAdaV~iGr~~l~ 244 (336)
T 1ypf_A 232 GATMVMIGSLFAG 244 (336)
T ss_dssp TCSEEEESGGGTT
T ss_pred CCCEEEeChhhhc
Confidence 9999999999874
No 148
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=89.94 E-value=2.1 Score=41.39 Aligned_cols=129 Identities=13% Similarity=0.081 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccC----c-----------CCCCHHHHHH----HHHHHHHhhCCCcEEEEecC----
Q 018253 79 EAYDDLVNMQIVNGAEGMIVGGTTGE----G-----------QLMSWDEHIM----LIGHTVNCFGASVKVIGNTG---- 135 (359)
Q Consensus 79 ~~l~~li~~li~~Gv~Gl~v~GstGE----~-----------~~LT~~Er~~----li~~~v~~~~grvpViagvg---- 135 (359)
+.+.+-.++..++|.|||=+.+..|= | +-=|.+.|.+ +++.+++.++.+ ||.+=++
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrls~~~~ 245 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRISPFAH 245 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEeccccc
Confidence 45666677778899999999887541 1 1123566744 455566666655 7776554
Q ss_pred ------CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCH-HHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 136 ------SNSTREAIHATEQGFAVGMHAALHINPYYGKTSL-EGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 136 ------~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~-~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
..+.++++++++..++.|+|.+-+..+.+..... ..-..+.+.|.++ .||+. + | .++++...++
T Consensus 246 ~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~-~-----G-~i~~~~a~~~ 318 (376)
T 1icp_A 246 YNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIV-A-----G-GYDREDGNRA 318 (376)
T ss_dssp TTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEE-E-----S-SCCHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEE-e-----C-CCCHHHHHHH
Confidence 2356789999999999999999988775432111 0111233445444 47654 2 2 2478888877
Q ss_pred hcC--CCeEEE
Q 018253 207 AQS--PNLAGV 215 (359)
Q Consensus 207 a~~--pnivGi 215 (359)
.+. -.+|++
T Consensus 319 l~~g~aD~V~~ 329 (376)
T 1icp_A 319 LIEDRADLVAY 329 (376)
T ss_dssp HHTTSCSEEEE
T ss_pred HHCCCCcEEee
Confidence 643 344444
No 149
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=89.92 E-value=0.92 Score=43.76 Aligned_cols=67 Identities=12% Similarity=0.105 Sum_probs=48.1
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
.+.++.+++.|++.|.+..+.|.. +...+.++.+.+.. .+||++|... + .+.++.+.++|||++.+.
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~-----~~~~~~i~~i~~~~--~~~Vivg~v~-t----~e~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHS-----LNIIRTLKEIKSKM--NIDVIVGNVV-T----EEATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSB-----HHHHHHHHHHHHHC--CCEEEEEEEC-S----HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCc-----HHHHHHHHHHHHhc--CCcEEEccCC-C----HHHHHHHHHcCcCEEEEe
Confidence 567788889999999887666642 44556677766665 5899984321 2 455778889999999983
No 150
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=89.85 E-value=1.6 Score=40.69 Aligned_cols=120 Identities=19% Similarity=0.202 Sum_probs=73.6
Q ss_pred cCCceEEeeecCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-CccCc-CCCC-HHHHHHHHHHHHHhhCC-CcEEEE
Q 018253 58 KALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEG-QLMS-WDEHIMLIGHTVNCFGA-SVKVIG 132 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~-ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~-~~LT-~~Er~~li~~~v~~~~g-rvpVia 132 (359)
+..|++-..+--|.+.|+ .|.+...++++.+++.|++-|=++| ||.-+ ...+ .+|..+++..+...... ++||.+
T Consensus 16 ~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSI 95 (282)
T 1aj0_A 16 HVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISV 95 (282)
T ss_dssp EEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred EEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 367775543434866664 5789999999999999999999999 66332 2333 56666665544332221 567766
Q ss_pred ecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 133 NTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 133 gvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
-+.. . +-++.|.++|++-+--+.-. ..+++ +..+++. .|+++-+.
T Consensus 96 DT~~--~----~va~aAl~aGa~iINdvsg~----~d~~~---~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 96 DTSK--P----EVIRESAKVGAHIINDIRSL----SEPGA---LEAAAETGLPVCLMHM 141 (282)
T ss_dssp ECCC--H----HHHHHHHHTTCCEEEETTTT----CSTTH---HHHHHHHTCCEEEECC
T ss_pred eCCC--H----HHHHHHHHcCCCEEEECCCC----CCHHH---HHHHHHhCCeEEEEcc
Confidence 5543 2 33455555699877666443 11222 3344444 68887765
No 151
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=89.80 E-value=4.9 Score=36.69 Aligned_cols=166 Identities=11% Similarity=0.045 Sum_probs=86.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhC-CCcEEEEecCC-CCHHHHHHHHHHHHhCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGS-NSTREAIHATEQGFAVG 153 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~-grvpViagvg~-~st~~ai~la~~a~~~G 153 (359)
-|.+.+ ++.+.+.|++-+-+.....+....+.+. +++. +. -+++++.++.. .+.++++++++.++++|
T Consensus 23 p~~~~~---~~~l~~~Gad~ielg~pr~~~~g~~~~~---~~~~----l~~~~~~~~pn~~~~~~~~~~~~f~~~a~~ag 92 (264)
T 1xm3_A 23 PSFDIQ---KEAVAVSESDILTFAVRRMNIFEASQPN---FLEQ----LDLSKYTLLPNTAGASTAEEAVRIARLAKASG 92 (264)
T ss_dssp SCHHHH---HHHHHHHTCSEEEEETTSSTTC----------CTT----CCGGGSEEEEECTTCSSHHHHHHHHHHHHHTT
T ss_pred CCHHHH---HHHHHHcCCeEEEEcccccccCCCCHHH---HHHH----HHhcCCeEcCCccccCCHHHHHHHHHHHHHcC
Confidence 344444 3677788999997766534422223322 2222 22 25777777654 78899999999999986
Q ss_pred CCEEE-E-cCCCC--CCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCeEEE-ec------cCc
Q 018253 154 MHAAL-H-INPYY--GKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAGV-KE------CVG 220 (359)
Q Consensus 154 adav~-v-~pP~y--~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~-~pnivGi-K~------ss~ 220 (359)
.+.++ + +.|.. .....+++++..++.... ..++.+..| +++.+.++.+ -..++.. .- ...
T Consensus 93 g~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~-------~~~~a~~~~~~gad~v~~~~~~~Gt~~~~~ 165 (264)
T 1xm3_A 93 LCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSD-------DVVLARKLEELGVHAIMPGASPIGSGQGIL 165 (264)
T ss_dssp CCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECS-------CHHHHHHHHHHTCSCBEECSSSTTCCCCCS
T ss_pred CCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCC-------CHHHHHHHHHhCCCEEEECCcccCCCCCCC
Confidence 54442 2 22321 123445666666665443 455556554 2455666653 2222211 10 000
Q ss_pred hh----hHhhhhCCceEEEecCC--chhhhhhhhcCCceeecccc
Q 018253 221 ND----RVEHYTGNGIVVWSGND--DQCHDARWNHGATGVISVTS 259 (359)
Q Consensus 221 d~----~l~~~~~~~~~v~~G~d--~~~~~~~l~~Ga~G~is~~a 259 (359)
+. ++++..+-.+.+-.|-. +.. ...+.+|++|++.+++
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI~t~eda-~~~~~~GAdgViVGSA 209 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGIGSPKDA-AYAMELGADGVLLNTA 209 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHH-HHHHHTTCSEEEESHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCHHHH-HHHHHcCCCEEEEcHH
Confidence 11 23333332344444553 233 3457899999998875
No 152
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=89.77 E-value=2.3 Score=41.18 Aligned_cols=126 Identities=13% Similarity=0.053 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHH-HCCCCEEEEccC-----------------ccCcCCCCHHHHHHHHHHHHH----hhCCCcEEEEecC
Q 018253 78 LEAYDDLVNMQI-VNGAEGMIVGGT-----------------TGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTG 135 (359)
Q Consensus 78 ~~~l~~li~~li-~~Gv~Gl~v~Gs-----------------tGE~~~LT~~Er~~li~~~v~----~~~grvpViagvg 135 (359)
.+.+.+-.+... ++|.|||=+.+. |.|+--.|.+.|.+++..+++ .++.. ||.+=++
T Consensus 173 i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~-~v~vRis 251 (379)
T 3aty_A 173 IPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSD-RVGLRIS 251 (379)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGG-GEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCC-eEEEEEC
Confidence 344556666777 899999999775 445444477777766555554 44434 5665222
Q ss_pred ----------CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCC-HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHH
Q 018253 136 ----------SNSTREAIHATEQGFAVGMHAALHINPYYGKTS-LEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRV 202 (359)
Q Consensus 136 ----------~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s-~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~ 202 (359)
..+.++++++++..++.|+|.+-+..+.+..+. +. + .+.|.+. .||+.= -| ++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~---~-~~~ir~~~~iPvi~~-----G~--it~~~ 320 (379)
T 3aty_A 252 PLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD---V-VAWVRGSYSGVKISN-----LR--YDFEE 320 (379)
T ss_dssp TTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC---H-HHHHHTTCCSCEEEE-----SS--CCHHH
T ss_pred cccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH---H-HHHHHHHCCCcEEEE-----CC--CCHHH
Confidence 346788999999999999999998875432110 11 3 4455554 576642 13 38888
Q ss_pred HHHHhcC--CCeEEE
Q 018253 203 IHTMAQS--PNLAGV 215 (359)
Q Consensus 203 l~~La~~--pnivGi 215 (359)
..++.+. -.+|++
T Consensus 321 a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 321 ADQQIREGKVDAVAF 335 (379)
T ss_dssp HHHHHHTTSCSEEEE
T ss_pred HHHHHHcCCCeEEEe
Confidence 8887743 345544
No 153
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=89.63 E-value=6.2 Score=34.96 Aligned_cols=134 Identities=5% Similarity=0.003 Sum_probs=75.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEE-Eec----CCC---CHHHHHHHHHHHHhC
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNT----GSN---STREAIHATEQGFAV 152 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVi-agv----g~~---st~~ai~la~~a~~~ 152 (359)
+...++.+.+.|.+||=+.+.......++.++..++- ...+.. .+.+. ++. ... ..+...+.++.|+++
T Consensus 21 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~-~~~~~~--gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 97 (272)
T 2q02_A 21 IEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVR-NLAEKY--GLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGV 97 (272)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHH-HHHHHT--TCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeeccccccccccccCHHHHH-HHHHHc--CCeEEechhhhccCCcHHHHHHHHHHHHHHHHHh
Confidence 4667777888999999876532222222333333333 333333 34442 222 111 135567778888999
Q ss_pred CCCEEEEcCCCCCCCCHHHH-HHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHhc-C-CCeEEEec
Q 018253 153 GMHAALHINPYYGKTSLEGL-ISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMAQ-S-PNLAGVKE 217 (359)
Q Consensus 153 Gadav~v~pP~y~~~s~~~l-~~yf~~Ia~a-----~PiiiYn~P~~tg~~ls~e~l~~La~-~-pnivGiK~ 217 (359)
|++.+.+.+........+.+ .+.++.+++. +.+.+-|.+.....--+++.+.+|.+ + |++.-.=|
T Consensus 98 G~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~~v~~~~g~~~D 170 (272)
T 2q02_A 98 GARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREAGSPFKVLLD 170 (272)
T ss_dssp TCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHHTCCCEEEEE
T ss_pred CCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHHHhCcCeEEEEE
Confidence 99998886544433334666 7888887753 45667776522223345777777763 3 66543333
No 154
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=89.60 E-value=5.4 Score=36.21 Aligned_cols=162 Identities=14% Similarity=0.125 Sum_probs=103.1
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC-CcEE--EEec--CCCCHHHHHHHHHHH
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKV--IGNT--GSNSTREAIHATEQG 149 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g-rvpV--iagv--g~~st~~ai~la~~a 149 (359)
.-..+.++++++...+.|+.++++.-+ .+..+.+...+ .++| ++|. |..+++.-+.-++.|
T Consensus 39 ~~t~~~i~~lc~eA~~~~~~aVcV~p~--------------~v~~a~~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~A 104 (239)
T 3ngj_A 39 DATEEQIRKLCSEAAEYKFASVCVNPT--------------WVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVA 104 (239)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEECGG--------------GHHHHHHHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEECHH--------------HHHHHHHHhCCCCCeEEEEeccCCCCCchHHHHHHHHHH
Confidence 345688999999999999999998753 23333444333 3454 4554 667888889999999
Q ss_pred HhCCCCEEEEcCCCC-C-CCCHHHHHHHHHHHHhcC---Ce-EEEeCCCCCCCCCCHHHHHHHhc---CCCeEEEeccCc
Q 018253 150 FAVGMHAALHINPYY-G-KTSLEGLISHFDSVLSMG---PT-IIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGVKECVG 220 (359)
Q Consensus 150 ~~~Gadav~v~pP~y-~-~~s~~~l~~yf~~Ia~a~---Pi-iiYn~P~~tg~~ls~e~l~~La~---~pnivGiK~ss~ 220 (359)
.+.|||.+-++.++- . ..+.+.+.+-.++|.++. ++ +||. ++. |+.+.+.+.++ .-..-.||-|+|
T Consensus 105 i~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlE----t~~-Lt~eei~~a~~ia~~aGADfVKTSTG 179 (239)
T 3ngj_A 105 VEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIE----CCY-LTNEEKVEVCKRCVAAGAEYVKTSTG 179 (239)
T ss_dssp HHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECC----GGG-SCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred HHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEe----cCC-CCHHHHHHHHHHHHHHCcCEEECCCC
Confidence 999999997776643 2 245667777777777652 22 2443 454 88888887754 346667898855
Q ss_pred ---------hhh-HhhhhCCceEE--EecCCc--hhhhhhhhcCCc--eeec
Q 018253 221 ---------NDR-VEHYTGNGIVV--WSGNDD--QCHDARWNHGAT--GVIS 256 (359)
Q Consensus 221 ---------d~~-l~~~~~~~~~v--~~G~d~--~~~~~~l~~Ga~--G~is 256 (359)
|.+ +++..++++.| -.|--+ .++ .++.+|++ |.-+
T Consensus 180 f~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~-~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 180 FGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAM-KMINNGASRIGASA 230 (239)
T ss_dssp SSSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHH-HHHHTTEEEEEESC
T ss_pred CCCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHH-HHHHhcccceeccc
Confidence 123 23334444444 333322 233 45788988 5543
No 155
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=89.49 E-value=11 Score=33.63 Aligned_cols=182 Identities=13% Similarity=0.041 Sum_probs=98.3
Q ss_pred CceEEeeecCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec----
Q 018253 60 LRLITAIKTPYLPDGRF-DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT---- 134 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~I-D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv---- 134 (359)
.|+++..-.+ +++-+ +.....++...+.+.|+.|+-+.+ .+-++.+.+.+ ++||+.-.
T Consensus 18 ~~livscq~~--~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~~-------------~~~i~~ir~~v--~~Pvig~~k~d~ 80 (232)
T 3igs_A 18 GGLIVSCQPV--PGSPLDKPEIVAAMALAAEQAGAVAVRIEG-------------IDNLRMTRSLV--SVPIIGIIKRDL 80 (232)
T ss_dssp CCEEEECCCC--TTCTTCSHHHHHHHHHHHHHTTCSEEEEES-------------HHHHHHHHTTC--CSCEEEECBCCC
T ss_pred CCEEEEEeCC--CCCCCCCcchHHHHHHHHHHCCCeEEEECC-------------HHHHHHHHHhc--CCCEEEEEeecC
Confidence 4666655333 22222 345688889999999999988731 23455555555 57986311
Q ss_pred CC--CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCC-CHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcC-C
Q 018253 135 GS--NSTREAIHATEQGFAVGMHAALHINPYYGKT-SLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQS-P 210 (359)
Q Consensus 135 g~--~st~~ai~la~~a~~~Gadav~v~pP~y~~~-s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~La~~-p 210 (359)
+. .-.....+.++.+.++|||.+++.......+ ..+++++++++. ..+++ -+. -+.+...+..+. .
T Consensus 81 ~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~-~~v-------~t~eea~~a~~~Ga 150 (232)
T 3igs_A 81 DESPVRITPFLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTM-ADC-------SSVDDGLACQRLGA 150 (232)
T ss_dssp SSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEE-EEC-------CSHHHHHHHHHTTC
T ss_pred CCcceEeCccHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEE-EeC-------CCHHHHHHHHhCCC
Confidence 11 1111234556777889999998876543323 334455544432 13433 232 246666666543 4
Q ss_pred CeEEEecc---------Cchhh-HhhhhCCceEEEe--cCC-chhhhhhhhcCCceeecccccccHHHHHH
Q 018253 211 NLAGVKEC---------VGNDR-VEHYTGNGIVVWS--GND-DQCHDARWNHGATGVISVTSNLVPGMMRE 268 (359)
Q Consensus 211 nivGiK~s---------s~d~~-l~~~~~~~~~v~~--G~d-~~~~~~~l~~Ga~G~is~~an~~P~l~~~ 268 (359)
.++|+... ..+.. +.+....++.++. |-. ..-+...+.+|++|++.|.+-.-|....+
T Consensus 151 d~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~p~~~~~ 221 (232)
T 3igs_A 151 DIIGTTMSGYTTPDTPEEPDLPLVKALHDAGCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRLEHICG 221 (232)
T ss_dssp SEEECTTTTSSSSSCCSSCCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHCHHHHHH
T ss_pred CEEEEcCccCCCCCCCCCCCHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcCHHHHHH
Confidence 56664321 11221 2222211444443 331 12223457789999999977766765443
No 156
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=89.37 E-value=1.4 Score=42.96 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=48.4
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag-vg~~st~~ai~la~~a~~~Gadav~v 159 (359)
...++.+++.|++.+.++.+.| +.+.-.++++.+.+.++ ++||+++ +. + .+.++.+.++|+|++.+
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g-----~~~~~~e~i~~ir~~~~-~~pviv~~v~--~----~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHG-----HSTRIIELIKKIKTKYP-NLDLIAGNIV--T----KEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC-----SSHHHHHHHHHHHHHCT-TCEEEEEEEC--S----HHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCC-----ChHHHHHHHHHHHHHCC-CCeEEEcCCC--c----HHHHHHHHhcCCCEEEE
Confidence 4556778899999999865554 23556677777777764 6899974 43 2 46778888999999999
No 157
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=89.32 E-value=1.7 Score=40.65 Aligned_cols=102 Identities=16% Similarity=0.052 Sum_probs=81.1
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC--CcEEEEecCCCCHHHHHHHHHHHH
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA--SVKVIGNTGSNSTREAIHATEQGF 150 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g--rvpViagvg~~st~~ai~la~~a~ 150 (359)
.++.|.+-+.++++.+.+.|++-|.+.-|+|= +++.+-.++++.+.+.+++ ++|+=++. +++..-++..+-.|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~~~~~~l~~H~-Hnd~Gla~AN~laA~ 219 (293)
T 3ewb_X 144 ATRSDRAFLIEAVQTAIDAGATVINIPDTVGY---TNPTEFGQLFQDLRREIKQFDDIIFASHC-HDDLGMATANALAAI 219 (293)
T ss_dssp GGGSCHHHHHHHHHHHHHTTCCEEEEECSSSC---CCHHHHHHHHHHHHHHCTTGGGSEEEEEC-BCTTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEecCCCCC---CCHHHHHHHHHHHHHhcCCccCceEEEEe-CCCcChHHHHHHHHH
Confidence 46799999999999999999999999999996 8999999999999988865 35665544 567788999999999
Q ss_pred hCCCCEEEEcCCCCC----CCCHHHHHHHHHH
Q 018253 151 AVGMHAALHINPYYG----KTSLEGLISHFDS 178 (359)
Q Consensus 151 ~~Gadav~v~pP~y~----~~s~~~l~~yf~~ 178 (359)
++||+.+=..---+. ..+-|+++..++.
T Consensus 220 ~aGa~~vd~sv~GlGeraGN~~~E~vv~~L~~ 251 (293)
T 3ewb_X 220 ENGARRVEGTINGIGERAGNTALEEVAVALHI 251 (293)
T ss_dssp HTTCCEEEEBGGGCCTTTCBCBHHHHHHHHHH
T ss_pred HhCCCEEEeeccccccccccHhHHHHHHHHHh
Confidence 999998866543332 2455666666654
No 158
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=89.18 E-value=3.3 Score=37.68 Aligned_cols=109 Identities=8% Similarity=-0.078 Sum_probs=64.7
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHH--------HHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHH-h
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEH--------IMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGF-A 151 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er--------~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~-~ 151 (359)
.+.+++.+-+.||+..++.++..-+.....++. ..+.+. ++...++...++.+--...+++++..+++. +
T Consensus 37 ~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~-~~~~p~r~~~~~~~p~~~~~~~~~el~~~~~~ 115 (307)
T 2f6k_A 37 PQLTLNFMRDNDISYSILSLSSPHVNFGDKAETIRLVEAANDDGKSL-AQQYPDQLGYLASLPIPYELDAVKTVQQALDQ 115 (307)
T ss_dssp HHHHHHHHHHTTEEEEEEECCSSCSCSSCHHHHHHHHHHHHHHHHHH-HHHCTTTEEEEECCCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCCHHHHHHHHHHHHHHHHHH-HHhCccceeEEEeCCCCCHHHHHHHHHHHHhc
Confidence 355666677899999888776432222222222 223333 333455654443343245677888777765 5
Q ss_pred CCCCEEEEcCCCCC-CCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 152 VGMHAALHINPYYG-KTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 152 ~Gadav~v~pP~y~-~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
.|+.++.+-+.+.. ..+.+.+...|+...+. +||+++--
T Consensus 116 ~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~ 156 (307)
T 2f6k_A 116 DGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHPN 156 (307)
T ss_dssp SCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEECC
T ss_pred cCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCC
Confidence 79999966544322 24445677777776665 79998764
No 159
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=89.14 E-value=2.7 Score=38.75 Aligned_cols=36 Identities=8% Similarity=0.168 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHH
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVN 122 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~ 122 (359)
++++.++.+.++|++|+++. -|..+|..++.+.+.+
T Consensus 111 g~e~f~~~~~~aGvdgvii~-------Dlp~ee~~~~~~~~~~ 146 (267)
T 3vnd_A 111 GIDEFYTKAQAAGVDSVLIA-------DVPVEESAPFSKAAKA 146 (267)
T ss_dssp CHHHHHHHHHHHTCCEEEET-------TSCGGGCHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEeC-------CCCHhhHHHHHHHHHH
Confidence 34667777777777777663 4444555555554443
No 160
>1wdd_A Ribulose bisphosphate carboxylase large chain; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: c.1.14.1 d.58.9.1 PDB: 3axk_A* 3axm_A* 1rlc_L* 4rub_A* 3rub_L 1ej7_L 1aa1_L* 1aus_L 1rbo_L* 1rco_L* 1rcx_L* 1rxo_L* 1gk8_A* 1ir2_A* 1uzd_A* 1uzh_A* 2v69_A* 1uwa_A* 2v63_A* 2v67_A* ...
Probab=88.96 E-value=5.1 Score=40.01 Aligned_cols=95 Identities=12% Similarity=0.157 Sum_probs=71.4
Q ss_pred eeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CccCcCCCCHHHHHHHHHHHHH----hhCCCcEEEEecCCCCH
Q 018253 65 AIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNST 139 (359)
Q Consensus 65 al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~~LT~~Er~~li~~~v~----~~~grvpViagvg~~st 139 (359)
-+-|-+++.--+.-+.+.+.+-.+...|+|=+ =.- .-+....+.++||...+-.+++ .++.+.-..+++++.++
T Consensus 169 llgtiiKPklGLs~~~~a~~~ye~~~GGlDfi-KDDE~l~~qpf~p~~eR~~~v~eai~rA~~eTGe~k~~~~NiTa~~~ 247 (477)
T 1wdd_A 169 LLGCTIKPKLGLSAKNYGRACYECLRGGLDFT-KDDENVNSQPFMRWRDRFVFCAEAIYKSQAETGEIKGHYLNATAGTC 247 (477)
T ss_dssp EEECBCSSSSCCCHHHHHHHHHHHHHTTCSEE-ECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECCCSSH
T ss_pred eEEeecCccccCCHHHHHHHHHHHHhcCCcee-eCCccCCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceeecCcCCCCH
Confidence 34455566655899999999999999999933 222 3345667889999875544444 34444445679999889
Q ss_pred HHHHHHHHHHHhCCCCEEEEc
Q 018253 140 REAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~ 160 (359)
+|.+++++.++++|+.++|+-
T Consensus 248 ~eM~~Ra~~a~e~G~~~~mvd 268 (477)
T 1wdd_A 248 EEMIKRAVFARELGVPIVMHD 268 (477)
T ss_dssp HHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHhCCCeEEEe
Confidence 999999999999999999986
No 161
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=88.92 E-value=2 Score=39.76 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCH--------HHHHHHHHHHHh
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST--------REAIHATEQGFA 151 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st--------~~ai~la~~a~~ 151 (359)
.++++++++-+.|.+.|=+.-.|-+ |+.++|.++++.+.+ ...|+.-+|.-+. .+-|++++..-+
T Consensus 111 ~~~~yl~~~k~lGF~~IEISdGti~---l~~~~~~~lI~~a~~----~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLe 183 (276)
T 1u83_A 111 KVNEFHRYCTYFGCEYIEISNGTLP---MTNKEKAAYIADFSD----EFLVLSEVGSKDAELASRQSSEEWLEYIVEDME 183 (276)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSSSC---CCHHHHHHHHHHHTT----TSEEEEECSCCC------CCSTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCccc---CCHHHHHHHHHHHHh----hcEEeeeccccCccccCCCCHHHHHHHHHHHHH
Confidence 6778888888888888877655544 899999999986544 3678887766444 789999999999
Q ss_pred CCCCEEEEcC
Q 018253 152 VGMHAALHIN 161 (359)
Q Consensus 152 ~Gadav~v~p 161 (359)
+||+.||+-.
T Consensus 184 AGA~~ViiEa 193 (276)
T 1u83_A 184 AGAEKVITEA 193 (276)
T ss_dssp HTEEEEEEC-
T ss_pred CCCcEEEEee
Confidence 9999999864
No 162
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=88.92 E-value=4.7 Score=39.79 Aligned_cols=95 Identities=15% Similarity=0.047 Sum_probs=71.9
Q ss_pred eEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHh----hCCCcEEEEecCCC
Q 018253 62 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSN 137 (359)
Q Consensus 62 i~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~----~~grvpViagvg~~ 137 (359)
++-.++ ++.--+.-+.+.+.+-.+...|+|=+====.-+....+.++||...+-.+++. ++.+.-..++++ .
T Consensus 163 l~gtii---KPklGLs~~~~a~~~ye~~~GGlDfiKDDE~~~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiT-~ 238 (432)
T 3nwr_A 163 MIGTII---KPNVGLSAAETAALVRELCEAGVDFIKDDEVCANPAHAPLAERVRAVMSEVRRYRERSGRPVMVAFNIT-D 238 (432)
T ss_dssp EEEEEC---SSSSCCCHHHHHHHHHHHHHHTCSEEECCTTCSSCTTSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC-S
T ss_pred eEEEee---ccccCCCHHHHHHHHHHHHhcCCceeECCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCcceEEeecC-C
Confidence 444444 44544889999999999999999954222244567788999998877666654 444444577999 6
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEc
Q 018253 138 STREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~ 160 (359)
+++|.+++++.+.+.|++++|+-
T Consensus 239 ~~~em~~Ra~~a~e~G~~~~mvd 261 (432)
T 3nwr_A 239 DLDAMRRHAELVEREGGSCVMAS 261 (432)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Confidence 89999999999999999999886
No 163
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=88.89 E-value=4.4 Score=38.31 Aligned_cols=124 Identities=14% Similarity=0.136 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHhhCCCcEEEEecCCCC------------------------------HHHHHHHHHHHHhCCCCEEEEcC
Q 018253 112 EHIMLIGHTVNCFGASVKVIGNTGSNS------------------------------TREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 112 Er~~li~~~v~~~~grvpViagvg~~s------------------------------t~~ai~la~~a~~~Gadav~v~p 161 (359)
...+.++.+.+..++++|+|..+++.= ++..++.++...++|||++++..
T Consensus 132 ~v~eai~~l~~~l~~~~pligf~g~P~Tla~~l~~~~~~~~~~~~~pe~~~~ll~~i~~~~~~~~~~qi~aGad~i~i~D 211 (348)
T 4ay7_A 132 VVLEAIKIIREKVGPDVPIVGGMEGPVTVASDLVSVKSFMKWSIKKTDLLEQALDIATEASIIYANAMVEAGADVIAIAD 211 (348)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEEECHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHHHhCCCeeEEEeccchHHHHHhcccchHHHHHHHHChHhHHHHHHHHHHHHHHHHHHHHhcCCCcceeec
Confidence 344556666677777888887776531 34456667777789999999987
Q ss_pred CCCCC--CCHHHH----HHHHHHHHhcC-CeEEEeCCCCCCCCCCHHHHHHHhcC-CCeEEEeccCchh-hHhhhhCCce
Q 018253 162 PYYGK--TSLEGL----ISHFDSVLSMG-PTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGVKECVGND-RVEHYTGNGI 232 (359)
Q Consensus 162 P~y~~--~s~~~l----~~yf~~Ia~a~-PiiiYn~P~~tg~~ls~e~l~~La~~-pnivGiK~ss~d~-~l~~~~~~~~ 232 (359)
+.-.. .|++.. ..|+++|.+.. .+.++++.+. ....+..+++. .+++++=....+. ..++..++++
T Consensus 212 ~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~iih~~g~-----~~~~l~~~~~~g~d~i~~d~~~~~~~~~k~~~g~~~ 286 (348)
T 4ay7_A 212 PVASPDLMSPDSFRQFLKSRLQKFASSVNSVTVLHICGN-----VNPILSDMADCGFEGLSVEEKIGSAKKGKEVIGTRA 286 (348)
T ss_dssp GGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEEEEECCSC-----CHHHHHHHHTSCCSEEECCGGGCCHHHHHHHHTTSS
T ss_pred cccccccCCHHHHHHHhhHHHHHHHhhccCCcEEEecCC-----cHHHHHHHHHhccccccccchhhHHHHHHHHhCCCE
Confidence 75432 566554 44567777762 3334454432 13467777765 4677765544443 3445556777
Q ss_pred EEEecCCc
Q 018253 233 VVWSGNDD 240 (359)
Q Consensus 233 ~v~~G~d~ 240 (359)
.+..|.|.
T Consensus 287 ~l~Gnldp 294 (348)
T 4ay7_A 287 RLVGNVSS 294 (348)
T ss_dssp EEEEEECC
T ss_pred EEEcCCCC
Confidence 66655543
No 164
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=88.87 E-value=15 Score=35.24 Aligned_cols=169 Identities=12% Similarity=0.015 Sum_probs=92.5
Q ss_pred EEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHH
Q 018253 63 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREA 142 (359)
Q Consensus 63 ~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~a 142 (359)
+|.+..|++..++ .++...+.+.| |+.+..+ .+|.+|..+.++. +. ..+.+.++. ..++
T Consensus 43 ~Pii~ApM~~vte------~~lA~A~a~~G--g~gvi~~-----~~s~ee~~~~i~~----~~--~~~~~~~g~--~~~~ 101 (361)
T 3r2g_A 43 LPVISANMDTITE------SNMANFMHSKG--AMGALHR-----FMTIEENIQEFKK----CK--GPVFVSVGC--TENE 101 (361)
T ss_dssp SCEEECCSTTTCS------HHHHHHHHHTT--CEEBCCS-----CSCHHHHHHHHHT----CC--SCCBEEECS--SHHH
T ss_pred CCEEECCCCCchH------HHHHHHHHHcC--CCEEEeC-----CCCHHHHHHHHhh----cc--eEEEEEcCC--CHHH
Confidence 4556667744443 45555666777 4444443 2788887765542 22 123333332 3678
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEeccC
Q 018253 143 IHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECV 219 (359)
Q Consensus 143 i~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a---~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK~ss 219 (359)
.++++.+.++|+|.+.+-.+.-+ + +.+.+..+.|.+. .||+.=| ..+++...++.+. .+-+||.+.
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G~--~-~~~~e~I~~ir~~~~~~~Vi~G~-------V~T~e~A~~a~~a-GaD~I~Vg~ 170 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHAH--A-KYVGKTLKSLRQLLGSRCIMAGN-------VATYAGADYLASC-GADIIKAGI 170 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCCS--S-HHHHHHHHHHHHHHTTCEEEEEE-------ECSHHHHHHHHHT-TCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC--c-HhHHHHHHHHHHhcCCCeEEEcC-------cCCHHHHHHHHHc-CCCEEEEcC
Confidence 89999999999997776444321 2 3444555555543 5777644 3567877777653 344444332
Q ss_pred ch-----h------------hHhhhhCC-ceEEEe--cCC-chhhhhhhhcCCceeecccccccHH
Q 018253 220 GN-----D------------RVEHYTGN-GIVVWS--GND-DQCHDARWNHGATGVISVTSNLVPG 264 (359)
Q Consensus 220 ~d-----~------------~l~~~~~~-~~~v~~--G~d-~~~~~~~l~~Ga~G~is~~an~~P~ 264 (359)
+. . .+.+.... . .|+. |-. ..-...++.+|+++++.|...+..+
T Consensus 171 g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~ 235 (361)
T 3r2g_A 171 GGGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSA 235 (361)
T ss_dssp SSSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBT
T ss_pred CCCcCccccccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCc
Confidence 11 1 11221111 1 3443 321 1222345889999999887766543
No 165
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=88.84 E-value=1.1 Score=43.21 Aligned_cols=86 Identities=12% Similarity=0.079 Sum_probs=59.3
Q ss_pred CCHHHHHHHHHHHHHCC-CCEEEEccCcc---------CcCC---------CCH----HHHHHHHHHHHHhhCCCcEEEE
Q 018253 76 FDLEAYDDLVNMQIVNG-AEGMIVGGTTG---------EGQL---------MSW----DEHIMLIGHTVNCFGASVKVIG 132 (359)
Q Consensus 76 ID~~~l~~li~~li~~G-v~Gl~v~GstG---------E~~~---------LT~----~Er~~li~~~v~~~~grvpVia 132 (359)
+|.+.+.+.++.+.+.| +++|.+..|+| +-.. ||- .--.+++..+.+. .+++|||+
T Consensus 204 ~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~-~~~ipII~ 282 (354)
T 4ef8_A 204 FDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRR-CPGKLIFG 282 (354)
T ss_dssp CSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred CCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHh-CCCCCEEE
Confidence 46788888998888998 99999876663 1111 221 2235566666665 45799997
Q ss_pred ecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 018253 133 NTGSNSTREAIHATEQGFAVGMHAALHINPYYGK 166 (359)
Q Consensus 133 gvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~ 166 (359)
.=|=.+.+++.+... +|||+|++-...++.
T Consensus 283 ~GGI~s~~da~~~l~----aGAd~V~vgra~l~~ 312 (354)
T 4ef8_A 283 CGGVYTGEDAFLHVL----AGASMVQVGTALQEE 312 (354)
T ss_dssp ESCCCSHHHHHHHHH----HTEEEEEECHHHHHH
T ss_pred ECCcCCHHHHHHHHH----cCCCEEEEhHHHHHh
Confidence 555556777777753 799999998876543
No 166
>4f0h_A Ribulose bisphosphate carboxylase large chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_A 4f0m_A 1bwv_A* 1iwa_A 1bxn_A
Probab=88.83 E-value=4.1 Score=40.85 Aligned_cols=95 Identities=14% Similarity=0.126 Sum_probs=72.5
Q ss_pred eecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHh----hCCCcEEEEecCCCCHHH
Q 018253 66 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSNSTRE 141 (359)
Q Consensus 66 l~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~----~~grvpViagvg~~st~~ 141 (359)
+-|-+++.--+.-+.+.+.+-.+...|+|=+====.-+....+..+||...+-.+++. ++.+.-..+++++.+.+|
T Consensus 179 lgtiiKPklGLs~~~~a~~~ye~~~GGlDfIKDDE~l~~Qpf~p~~eRv~~v~eai~rA~~eTGe~K~~~~NiTa~~~~e 258 (493)
T 4f0h_A 179 LGXTTKPKLGLSGKNYGRVVYEALKGGLDFVKDDENINSQPFMRWRERYLFVMEAVNKAAAATGEVKGHYLNVTAATMEE 258 (493)
T ss_dssp EEEBCSSSSCCCHHHHHHHHHHHHHHTCSEEECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECCCSSHHH
T ss_pred EEEeeccccCCCHHHHHHHHHHHHhcCCCccccccccCCCCCccHHHHHHHHHHHHHHHHHhHCCcceEEeecCCCCHHH
Confidence 3344455445889999999999999999954211234467788999999887777664 333444678999888999
Q ss_pred HHHHHHHHHhCCCCEEEEc
Q 018253 142 AIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~ 160 (359)
.+++++.+.+.|+.++|+-
T Consensus 259 M~~Ra~~a~e~G~~~vmvd 277 (493)
T 4f0h_A 259 MYARAQLAKELGSVIIMID 277 (493)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEe
Confidence 9999999999999999885
No 167
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=88.83 E-value=3.9 Score=39.69 Aligned_cols=94 Identities=13% Similarity=0.112 Sum_probs=72.2
Q ss_pred eEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHh----hCCCcEEEEecCCC
Q 018253 62 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSN 137 (359)
Q Consensus 62 i~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~----~~grvpViagvg~~ 137 (359)
++-.++-| - -+.-+.+.+.+-.+...|+|=+====.-+....+.++||...+-.+++. ++.+.--.+++++
T Consensus 133 llgtiiKP-l---GLs~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eR~~~~~eai~ra~~eTGe~k~y~~NiTa- 207 (378)
T 3qfw_A 133 LTASALKP-Q---GLSPAALASIAHQLALGGVDLIKDDHGLADQAFSPFAERAAAVGKAVREANAARGGRTLYAPNISG- 207 (378)
T ss_dssp EEEEEECC-T---TSCHHHHHHHHHHHHHTTCSEEEECTTCSSCTTSCHHHHHHHHHHHHHHHHHHHTCCCEEECBCCS-
T ss_pred eeeeeccC-C---cCCHHHHHHHHHHHHhcCCCcccCCcCcCCCCcccHHHHHHHHHHHHHHHHHhhCCccEEEeecCC-
Confidence 77777777 2 4899999999999999999954222234567788999998876666554 4444334557887
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEc
Q 018253 138 STREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~ 160 (359)
+++|.+++++.|+++|+.++|+-
T Consensus 208 ~~~em~~ra~~a~e~G~~~~mvd 230 (378)
T 3qfw_A 208 TLDDMRRQLGVIRDEGIGAVLVA 230 (378)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Confidence 69999999999999999999985
No 168
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=88.74 E-value=3.5 Score=38.50 Aligned_cols=98 Identities=12% Similarity=0.007 Sum_probs=61.5
Q ss_pred eEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCC-cEEEEecCCCCHH
Q 018253 62 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGAS-VKVIGNTGSNSTR 140 (359)
Q Consensus 62 i~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~gr-vpViagvg~~st~ 140 (359)
+-.+.++=| +.|.-..+.-...++..++.|++-|=+-=..|..-.=..++-.+-++.+++.+++. ++||.=++-.+.+
T Consensus 110 V~V~tVigF-P~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~e 188 (288)
T 3oa3_A 110 VGVTCVIGF-HEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTAD 188 (288)
T ss_dssp CEEEEEEST-TTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHH
T ss_pred CeEEEEeCC-CCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHH
Confidence 334444445 34666667777777777778877765444444433334555555666666655443 6777766666777
Q ss_pred HHHHHHHHHHhCCCCEEEEc
Q 018253 141 EAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 141 ~ai~la~~a~~~Gadav~v~ 160 (359)
+-++.++.|.++|||.|=..
T Consensus 189 ei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 189 EIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp HHHHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHHHHcCCCEEEcC
Confidence 77777777778888766554
No 169
>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: c.1.14.1 d.58.9.1 PDB: 1iwa_A 1bxn_A
Probab=88.73 E-value=5.2 Score=40.08 Aligned_cols=95 Identities=14% Similarity=0.138 Sum_probs=71.5
Q ss_pred eeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CccCcCCCCHHHHHHHHHHHHH----hhCCCcEEEEecCCCCH
Q 018253 65 AIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNST 139 (359)
Q Consensus 65 al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~~LT~~Er~~li~~~v~----~~~grvpViagvg~~st 139 (359)
-+-|-+++.--+.-+.+.+.+-.+...|+|=+= .- .-+....+.++||...+-.+++ .++.+.-..+++++.+.
T Consensus 178 llgtiiKPklGLsp~~~a~~~ye~~~GGlDfiK-DDE~l~~qpf~p~~eR~~~v~eai~rA~~eTGe~k~~~~NiTa~~~ 256 (493)
T 1bwv_A 178 LLGCTTKPKLGLSGKNYGRVVYEALKGGLDFVK-DDENINSQPFMRWRERYLFTMEAVNKASAATGEVKGHYLNVTAATM 256 (493)
T ss_dssp EEECBCSSSSCCCHHHHHHHHHHHHHHTCSEEE-CCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHTSCCEEEEECCCSSH
T ss_pred eEEeecCCccCCCHHHHHHHHHHHHhcCCCccc-CccccCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceeeccCCCCCH
Confidence 344555666558999999999999999999432 22 2345667889999875555544 34444445679999889
Q ss_pred HHHHHHHHHHHhCCCCEEEEc
Q 018253 140 REAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~ 160 (359)
+|.+++++.+.++|+.++|+-
T Consensus 257 ~eM~~Ra~~a~e~G~~~~mvd 277 (493)
T 1bwv_A 257 EEMYARANFAKELGSVIIMID 277 (493)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHhCCCeEEEe
Confidence 999999999999999999986
No 170
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=88.65 E-value=1.5 Score=42.75 Aligned_cols=81 Identities=19% Similarity=0.216 Sum_probs=62.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEcc-CccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-ecCCCCHHHHHHHHHHHH
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGF 150 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~~LT~~Er~~li~~~v~~~~grvpVia-gvg~~st~~ai~la~~a~ 150 (359)
.|..+.+--++-++.+.+.+.+|+.+.| +.|| +.+|+.++++.+.+..+...|.+. |+| +..+.++. .
T Consensus 203 QGg~~~dLR~~sa~~l~~~~~~GyaIGGlsvge----~~~~~~~~l~~~~~~LP~~kPRylmGvg--~P~~il~~----V 272 (386)
T 3bld_A 203 QGSVFENLRQQSADALAEIGFDGYAVGGLAGGE----GQDEMFRVLDFSVPMLPDDKPHYLMGVG--KPDDIVGA----V 272 (386)
T ss_dssp CCTTCHHHHHHHHHHHHHHCCSEEEECSCSSSS----CHHHHHHHHHHHGGGSCTTSCEEETTCC--CHHHHHHH----H
T ss_pred cCCCCHHHHHHHHHHHHhcCCCCeeEcCcccCC----CHHHHHHHHHHHHhhCCCCCcEEEeCCC--CHHHHHHH----H
Confidence 6778888888888999999999999999 8888 789999999999999887777654 777 56666654 4
Q ss_pred hCCCCEEEEcCCC
Q 018253 151 AVGMHAALHINPY 163 (359)
Q Consensus 151 ~~Gadav~v~pP~ 163 (359)
+.|+|-.=.+-|.
T Consensus 273 ~~GvDmFDcv~pt 285 (386)
T 3bld_A 273 ERGIDMFDCVLPT 285 (386)
T ss_dssp TTTCCEEC-----
T ss_pred HcCCCEEeCcHHH
Confidence 5899976555554
No 171
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=88.57 E-value=2.1 Score=40.09 Aligned_cols=119 Identities=16% Similarity=0.152 Sum_probs=64.2
Q ss_pred CCceEEeeecCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-CccCc-CCCC-HHHHHHHHHHHHHhhCCCcEEEEec
Q 018253 59 ALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEG-QLMS-WDEHIMLIGHTVNCFGASVKVIGNT 134 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~-ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~-~~LT-~~Er~~li~~~v~~~~grvpViagv 134 (359)
..||+-..+=-|.+.|+ .|.+...++++.+++.|++-|=++| ||.-+ ...+ .+|..+++..+......++||.+-+
T Consensus 25 iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT 104 (294)
T 2y5s_A 25 VMGILNATPDSFSDGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDT 104 (294)
T ss_dssp EEEEEECCC----------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEEC
T ss_pred EEEEEeCCCCCCCCCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEC
Confidence 56777654444887775 5899999999999999999999999 65433 3345 4455555544433332256766544
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 135 GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 135 g~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
.. .+ -++.|.++|++-+--+.-. . .+ +-+..+++. .|+++-+.
T Consensus 105 ~~--~~----Va~aAl~aGa~iINdVsg~--~--d~---~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 105 YK--PA----VMRAALAAGADLINDIWGF--R--QP---GAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp CC--HH----HHHHHHHHTCSEEEETTTT--C--ST---THHHHHSSSSCEEEEECC
T ss_pred CC--HH----HHHHHHHcCCCEEEECCCC--C--ch---HHHHHHHHhCCCEEEECC
Confidence 43 22 2333444488655444221 1 11 223434443 57777664
No 172
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=88.34 E-value=3.5 Score=37.91 Aligned_cols=107 Identities=12% Similarity=0.035 Sum_probs=65.9
Q ss_pred HHHHHHHHHCCCCEEEEccCc-cCcCCCCHH--------HHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHH-Hh
Q 018253 82 DDLVNMQIVNGAEGMIVGGTT-GEGQLMSWD--------EHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQG-FA 151 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~Gst-GE~~~LT~~--------Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a-~~ 151 (359)
+.+++.+-+.||+..++.+++ |-......+ .-..+.+. ++..++|.--++++.-...+++++..+++ ++
T Consensus 41 ~~~l~~m~~~GV~~~v~~~~~p~~~~~~d~~~~~~~~~~~n~~~~~~-~~~~p~r~~~~~~v~p~~~~~~~~el~~~~~~ 119 (327)
T 2dvt_A 41 DTRLKLMDAHGIETMILSLNAPAVQAIPDRRKAIEIARRANDVLAEE-CAKRPDRFLAFAALPLQDPDAATEELQRCVND 119 (327)
T ss_dssp SHHHHHHHHTTEEEEEEEECSSGGGGCCCHHHHHHHHHHHHHHHHHH-HHHCTTTEEEEECCCTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhcCCcEEEEeCCCCcccccCChHHHHHHHHHHHHHHHHH-HhhCCCceEEEeecCcCCHHHHHHHHHHHHhc
Confidence 567777788999998887764 221111222 22233333 33345565445666655666778877777 46
Q ss_pred CCCCEEEEcCCCC------C-CCCHHHHHHHHHHHHhc-CCeEEEe
Q 018253 152 VGMHAALHINPYY------G-KTSLEGLISHFDSVLSM-GPTIIYN 189 (359)
Q Consensus 152 ~Gadav~v~pP~y------~-~~s~~~l~~yf~~Ia~a-~PiiiYn 189 (359)
.|+.++-+.+.++ . ..+.+.+...|+...+. +||+++-
T Consensus 120 ~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~ 165 (327)
T 2dvt_A 120 LGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHP 165 (327)
T ss_dssp TCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEEC
T ss_pred CCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECC
Confidence 7999997655443 1 23445677777776665 8999985
No 173
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=88.34 E-value=1.3 Score=40.87 Aligned_cols=90 Identities=16% Similarity=0.100 Sum_probs=59.3
Q ss_pred HHHHHHHHCCCCEEEEccC-ccCcCCCCHHHHHHHHHHHHHhhCCC-cEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 83 DLVNMQIVNGAEGMIVGGT-TGEGQLMSWDEHIMLIGHTVNCFGAS-VKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~Gs-tGE~~~LT~~Er~~li~~~v~~~~gr-vpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
.+.+.+.+.|++.+...|+ .|=+.-++. ..+++.+++.. .+ +|||++-|=.+.+++ ..|.++|||+|++-
T Consensus 136 ~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~---~~~L~~i~~~~-~~~vPVI~~GGI~tpsDA----a~AmeLGAdgVlVg 207 (268)
T 2htm_A 136 VLAKRLAALGTATVMPLAAPIGSGWGVRT---RALLELFAREK-ASLPPVVVDAGLGLPSHA----AEVMELGLDAVLVN 207 (268)
T ss_dssp HHHHHHHHHTCSCBEEBSSSTTTCCCSTT---HHHHHHHHHTT-TTSSCBEEESCCCSHHHH----HHHHHTTCCEEEES
T ss_pred HHHHHHHhcCCCEEEecCccCcCCcccCC---HHHHHHHHHhc-CCCCeEEEeCCCCCHHHH----HHHHHcCCCEEEEC
Confidence 3444555579999999775 454555544 33466666622 35 999997766566665 45667999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 018253 161 NPYYGKTSLEGLISHFDSVL 180 (359)
Q Consensus 161 pP~y~~~s~~~l~~yf~~Ia 180 (359)
.=.....++..+.+-|..-.
T Consensus 208 SAI~~a~dP~~ma~af~~Av 227 (268)
T 2htm_A 208 TAIAEAQDPPAMAEAFRLAV 227 (268)
T ss_dssp HHHHTSSSHHHHHHHHHHHH
T ss_pred hHHhCCCCHHHHHHHHHHHH
Confidence 76665556666666666543
No 174
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=88.32 E-value=2.3 Score=37.54 Aligned_cols=77 Identities=13% Similarity=0.094 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v 159 (359)
...+.++.+.+.|++.|.+....+.+. ......++++.+.+.. ++||+++-+-.+.++ ++.+.++|||++++
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~--~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~----~~~~~~~Gad~V~i 105 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPE--GRATFIDSVKRVAEAV--SIPVLVGGGVRSLED----ATTLFRAGADKVSV 105 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTT--THHHHHHHHHHHHHHC--SSCEEEESSCCSHHH----HHHHHHHTCSEEEE
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCcccc--CCcccHHHHHHHHHhc--CCCEEEECCCCCHHH----HHHHHHcCCCEEEE
Confidence 456678888899999998876555432 2334456666666655 589998776656544 45566689999998
Q ss_pred cCCCC
Q 018253 160 INPYY 164 (359)
Q Consensus 160 ~pP~y 164 (359)
..+.+
T Consensus 106 ~~~~~ 110 (253)
T 1h5y_A 106 NTAAV 110 (253)
T ss_dssp SHHHH
T ss_pred ChHHh
Confidence 75544
No 175
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=88.23 E-value=7.3 Score=35.44 Aligned_cols=110 Identities=11% Similarity=0.138 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCCEEE
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAAL 158 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag-vg~~st~~ai~la~~a~~~Gadav~ 158 (359)
++.+.++.+.++|++|+++. -++.+|..++++.+.++ | +.++.- .-+.+.+...+.++.+ .|.- ..
T Consensus 110 g~~~f~~~~~~aG~dgvii~-------dl~~ee~~~~~~~~~~~--g-l~~i~l~~p~t~~~rl~~ia~~a--~gfi-y~ 176 (262)
T 2ekc_A 110 GLEKFCRLSREKGIDGFIVP-------DLPPEEAEELKAVMKKY--V-LSFVPLGAPTSTRKRIKLICEAA--DEMT-YF 176 (262)
T ss_dssp CHHHHHHHHHHTTCCEEECT-------TCCHHHHHHHHHHHHHT--T-CEECCEECTTCCHHHHHHHHHHC--SSCE-EE
T ss_pred hHHHHHHHHHHcCCCEEEEC-------CCCHHHHHHHHHHHHHc--C-CcEEEEeCCCCCHHHHHHHHHhC--CCCE-EE
Confidence 44777888888888888875 35567777777666553 1 222221 1222333333444433 2332 22
Q ss_pred EcCC-CCCCCC--H-HHHHHHHHHHHhc--CCeEEEeCCCCCCCCCC-HHHHHHHhcC
Q 018253 159 HINP-YYGKTS--L-EGLISHFDSVLSM--GPTIIYNVPSRTGQDIP-PRVIHTMAQS 209 (359)
Q Consensus 159 v~pP-~y~~~s--~-~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls-~e~l~~La~~ 209 (359)
+... .....+ . +.+.++.+.+.+. .|+.+ |..++ ++.+.++...
T Consensus 177 vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~v-------G~GI~t~e~~~~~~~g 227 (262)
T 2ekc_A 177 VSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVV-------GFGVSKKEHAREIGSF 227 (262)
T ss_dssp ESSCC---------CHHHHHHHHHHHHHCCSCEEE-------ESSCCSHHHHHHHHTT
T ss_pred EecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEE-------eCCCCCHHHHHHHHcC
Confidence 2222 222211 2 3455666666653 56654 55676 7888777654
No 176
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=88.18 E-value=3.3 Score=36.93 Aligned_cols=75 Identities=19% Similarity=0.148 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcc-CcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTG-EGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstG-E~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Ga 154 (359)
+|.+.+.+..+.+.+.|+++|-.. || +..-.|. +.++.+.+.+++++||++.=|=.+.+++.++.+ +||
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~ts--tg~~~gga~~----~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~----aGA 198 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTS--TGFAPRGTTL----EEVRLIKSSAKGRIKVKASGGIRDLETAISMIE----AGA 198 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECC--CSCSSSCCCH----HHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHH----TTC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC--CCCCCCCCCH----HHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHH----hCc
Confidence 667778999999999999999433 22 1111343 344455566677999997545556777777774 899
Q ss_pred CEEEEc
Q 018253 155 HAALHI 160 (359)
Q Consensus 155 dav~v~ 160 (359)
|.+-+.
T Consensus 199 ~~iG~s 204 (225)
T 1mzh_A 199 DRIGTS 204 (225)
T ss_dssp SEEEES
T ss_pred hHHHHc
Confidence 965443
No 177
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=88.13 E-value=1.7 Score=37.60 Aligned_cols=88 Identities=16% Similarity=0.164 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHCCCCEEEEcc--CccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEE
Q 018253 80 AYDDLVNMQIVNGAEGMIVGG--TTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAA 157 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~G--stGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav 157 (359)
...+.++.+...|+.-+++.| .+|...-+. .+.++...+.. ++|+|+..+..+.++..+.. +.|+|++
T Consensus 131 ~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~~----~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~----~~G~~~~ 200 (237)
T 3cwo_X 131 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAF----LAGADAA 200 (237)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTCCSCCC----HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHH----HHTCSEE
T ss_pred CHHHHHHHHhhcCCCeEEEEecCCCCcccccc----HHHHHHHHHhc--CCCEEecCCCCCHHHHHHHH----HcCcHHH
Confidence 345667777778888888877 556555554 34444444433 68999988777777766654 3699999
Q ss_pred EEcCCCCCC-CCHHHHHHHHH
Q 018253 158 LHINPYYGK-TSLEGLISHFD 177 (359)
Q Consensus 158 ~v~pP~y~~-~s~~~l~~yf~ 177 (359)
++..-.|.+ .+.+++.++.+
T Consensus 201 ~vg~a~~~~~~~~~~~~~~l~ 221 (237)
T 3cwo_X 201 LAASVFHFREIDVRELKEYLK 221 (237)
T ss_dssp EESHHHHTTSSCHHHHHHHHH
T ss_pred hhhHHHHcCCCCHHHHHHHHH
Confidence 999887654 57788877654
No 178
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=88.05 E-value=7.7 Score=35.65 Aligned_cols=99 Identities=10% Similarity=-0.021 Sum_probs=62.0
Q ss_pred CCCCHHHHHH-HHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHh-CCCCEEEEc--CCCC------CCCCHHHHHHH
Q 018253 106 QLMSWDEHIM-LIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFA-VGMHAALHI--NPYY------GKTSLEGLISH 175 (359)
Q Consensus 106 ~~LT~~Er~~-li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~-~Gadav~v~--pP~y------~~~s~~~l~~y 175 (359)
...+.++..+ +++.+.+. ....|++++++..+.++..+.++.+++ .|+|++-+- .|.. +..+.+.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~-~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~ei 155 (311)
T 1ep3_A 77 QNPGLEVIMTEKLPWLNEN-FPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAAL 155 (311)
T ss_dssp CBCCHHHHHHTHHHHHHHH-CTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhc-CCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHH
Confidence 4456555433 34443331 225799999999899999999999998 999988653 2322 11255666777
Q ss_pred HHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc
Q 018253 176 FDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ 208 (359)
Q Consensus 176 f~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~ 208 (359)
.+++.+. .||++--.|..+ =..+...++.+
T Consensus 156 i~~v~~~~~~pv~vk~~~~~~---~~~~~a~~l~~ 187 (311)
T 1ep3_A 156 VKACKAVSKVPLYVKLSPNVT---DIVPIAKAVEA 187 (311)
T ss_dssp HHHHHHHCSSCEEEEECSCSS---CSHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEECCChH---HHHHHHHHHHH
Confidence 7777665 588876544321 12344555544
No 179
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=87.84 E-value=3.7 Score=39.95 Aligned_cols=84 Identities=18% Similarity=0.069 Sum_probs=51.8
Q ss_pred CcEEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEEcC------CCCC-CCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCC
Q 018253 127 SVKVIGN-TGSNSTREAIHATEQGFAVGMHAALHIN------PYYG-KTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQ 196 (359)
Q Consensus 127 rvpViag-vg~~st~~ai~la~~a~~~Gadav~v~p------P~y~-~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~ 196 (359)
+.++|+| ++-+|.+.+.++++.++++|+|++-... ||.+ .++.+++ ..+.++++. +|++- -
T Consensus 142 ~~~~Iigpcsves~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl-~~L~~~~~~~Gl~~~t--e------ 212 (385)
T 3nvt_A 142 EPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGL-KILKRVSDEYGLGVIS--E------ 212 (385)
T ss_dssp SCEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHHTCEEEE--E------
T ss_pred CeEEEEEeCCcCCHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHH-HHHHHHHHHcCCEEEE--e------
Confidence 3456777 6677999999999999999999886653 5433 3566655 455556654 45442 1
Q ss_pred CCCHHHHHHHhcCCCeEEEeccCch
Q 018253 197 DIPPRVIHTMAQSPNLAGVKECVGN 221 (359)
Q Consensus 197 ~ls~e~l~~La~~pnivGiK~ss~d 221 (359)
.++++.+..++++ +-.+|..+++
T Consensus 213 ~~d~~~~~~l~~~--vd~lkIgs~~ 235 (385)
T 3nvt_A 213 IVTPADIEVALDY--VDVIQIGARN 235 (385)
T ss_dssp CCSGGGHHHHTTT--CSEEEECGGG
T ss_pred cCCHHHHHHHHhh--CCEEEECccc
Confidence 1333344444443 4456666655
No 180
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=87.74 E-value=12 Score=35.76 Aligned_cols=122 Identities=10% Similarity=0.079 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
-|.+.+.+.++...+.|.+++=+-... +.++=.++++.+++.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~------~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 217 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGA------DWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY 217 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe
Confidence 356788888899999999998775432 56666788888888888789998865 45689999999999999887
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCeEEEeccC
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 219 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La--~~pnivGiK~ss 219 (359)
++--|+. + .+.+++|.+. .||+.=. .-.+++.+.++. ..-.++.+|-+-
T Consensus 218 ---~iE~P~~---~----~~~~~~l~~~~~iPI~~de------~i~~~~~~~~~i~~~~~d~v~ik~~~ 270 (379)
T 2rdx_A 218 ---ILEQPCR---S----YEECQQVRRVADQPMKLDE------CVTGLHMAQRIVADRGAEICCLKISN 270 (379)
T ss_dssp ---EEECCSS---S----HHHHHHHHTTCCSCEEECT------TCCSHHHHHHHHHHTCCSEEEEETTT
T ss_pred ---EEeCCcC---C----HHHHHHHHhhCCCCEEEeC------CcCCHHHHHHHHHcCCCCEEEEeccc
Confidence 4455653 2 5566777765 5766532 235688888875 357899999764
No 181
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=87.74 E-value=1.3 Score=40.67 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=52.3
Q ss_pred HHHHHHCCCCEEEE-ccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCC
Q 018253 85 VNMQIVNGAEGMIV-GGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPY 163 (359)
Q Consensus 85 i~~li~~Gv~Gl~v-~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~ 163 (359)
++...+.|++.++. .|.+|....++..+ .++.+.+.. ++||+++-|=.+.+++ +.+.++|||+|++..-.
T Consensus 140 a~~~~~~gad~v~~~~~~~Gt~~~~~~~~---~l~~i~~~~--~iPviv~gGI~t~eda----~~~~~~GAdgViVGSAi 210 (264)
T 1xm3_A 140 ARKLEELGVHAIMPGASPIGSGQGILNPL---NLSFIIEQA--KVPVIVDAGIGSPKDA----AYAMELGADGVLLNTAV 210 (264)
T ss_dssp HHHHHHHTCSCBEECSSSTTCCCCCSCHH---HHHHHHHHC--SSCBEEESCCCSHHHH----HHHHHTTCSEEEESHHH
T ss_pred HHHHHHhCCCEEEECCcccCCCCCCCCHH---HHHHHHhcC--CCCEEEEeCCCCHHHH----HHHHHcCCCEEEEcHHH
Confidence 44455667777655 44566554454333 555555533 7899987665455654 44456999999999865
Q ss_pred CCCCCH-HHHHHHHHHH
Q 018253 164 YGKTSL-EGLISHFDSV 179 (359)
Q Consensus 164 y~~~s~-~~l~~yf~~I 179 (359)
....+. +.+.++.+.+
T Consensus 211 ~~a~dp~~~~~~l~~~v 227 (264)
T 1xm3_A 211 SGADDPVKMARAMKLAV 227 (264)
T ss_dssp HTSSSHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHH
Confidence 554554 4445555554
No 182
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=87.71 E-value=1 Score=40.28 Aligned_cols=89 Identities=16% Similarity=0.099 Sum_probs=58.2
Q ss_pred HHHHHHHHHCCCCEEEEccCccCc--CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHH-HhCC-CCEE
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEG--QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQG-FAVG-MHAA 157 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~--~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a-~~~G-adav 157 (359)
..+++.+.+.|++.+++.+.+-++ .-.+ .++++.+.+.+ ++|||++=|-.+.+++.++.+.. +..| +|++
T Consensus 147 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~----~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv 220 (241)
T 1qo2_A 147 VSLLKRLKEYGLEEIVHTEIEKDGTLQEHD----FSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKVHTETNGLLKGV 220 (241)
T ss_dssp HHHHHHHHTTTCCEEEEEETTHHHHTCCCC----HHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHhCCCCEEEEEeecccccCCcCC----HHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhcccccCCeEeEE
Confidence 344555667999999997754332 2233 34455555555 68999976665667777765542 1238 9999
Q ss_pred EEcCCCCC-CCCHHHHHHHH
Q 018253 158 LHINPYYG-KTSLEGLISHF 176 (359)
Q Consensus 158 ~v~pP~y~-~~s~~~l~~yf 176 (359)
++..-.|. +.+.+++.+|+
T Consensus 221 ~vgsal~~~~~~~~~~~~~~ 240 (241)
T 1qo2_A 221 IVGRAFLEGILTVEVMKRYA 240 (241)
T ss_dssp EECHHHHTTSSCHHHHHHHH
T ss_pred EeeHHHHcCCCCHHHHHHHh
Confidence 99987664 45778877764
No 183
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=87.68 E-value=3.6 Score=41.26 Aligned_cols=68 Identities=13% Similarity=0.251 Sum_probs=48.7
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
...++.++++|++.+.+..+.|. .+.-.++++.+.+..+ .+||++|-.. +. +.++.+.++|||++.+.
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~-----~~~~~~~i~~ir~~~p-~~~Vi~g~v~-t~----e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGH-----SEGVLQRIRETRAAYP-HLEIIGGNVA-TA----EGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT-----SHHHHHHHHHHHHHCT-TCCEEEEEEC-SH----HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhccCceEEecccccc-----chHHHHHHHHHHHHCC-CceEEEcccC-cH----HHHHHHHHhCCCEEEEC
Confidence 44566778899999999888763 2445677777777664 6899886322 22 45677888999999974
No 184
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=87.60 E-value=8.3 Score=34.75 Aligned_cols=114 Identities=14% Similarity=0.089 Sum_probs=79.4
Q ss_pred ceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCC-cEEEEecCCC--
Q 018253 61 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGAS-VKVIGNTGSN-- 137 (359)
Q Consensus 61 Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~gr-vpViagvg~~-- 137 (359)
++-...+.=| +.|.-..+.-..-++..++.|++-|=+-=.-|..-.=.+++-.+-++.+++.+++. ++||.=++-.
T Consensus 63 ~v~v~tVigF-P~G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~ 141 (231)
T 3ndo_A 63 GLAIAAVAGF-PSGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLE 141 (231)
T ss_dssp TCEEEEEEST-TTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHH
T ss_pred CCeEEEEecC-CCCCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCC
Confidence 3444444445 36666677778888999999999987776776655556777777777777777653 6778877776
Q ss_pred --CHHHHHHHHHHHHhCCCCEEEEcCCCC--CCCCHHHHHHH
Q 018253 138 --STREAIHATEQGFAVGMHAALHINPYY--GKTSLEGLISH 175 (359)
Q Consensus 138 --st~~ai~la~~a~~~Gadav~v~pP~y--~~~s~~~l~~y 175 (359)
+.++-++.++.+.++|||.|=...=|. ...+.+++..+
T Consensus 142 ~~t~eei~~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm 183 (231)
T 3ndo_A 142 FSGEPLLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIM 183 (231)
T ss_dssp HTCHHHHHHHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHH
Confidence 778888899999999999886665443 23454444433
No 185
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=87.59 E-value=1.1 Score=40.61 Aligned_cols=73 Identities=14% Similarity=0.188 Sum_probs=55.4
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHH
Q 018253 67 KTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHAT 146 (359)
Q Consensus 67 ~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la 146 (359)
+|-.++|-+++.+.+++ +.++|+|.|.++||+|- |.+.-.++++.+.+ -++|++.=.++. +.+
T Consensus 15 ~~~~DPdk~~~~~~l~~----~~~~GtDaI~vGgs~gv----t~~~~~~~v~~ik~---~~~Piil~p~~~---~~~--- 77 (235)
T 3w01_A 15 IFKLDPAKHISDDDLDA----ICMSQTDAIMIGGTDDV----TEDNVIHLMSKIRR---YPLPLVLEISNI---ESV--- 77 (235)
T ss_dssp EEEECTTSCCCHHHHHH----HHTSSCSEEEECCSSCC----CHHHHHHHHHHHTT---SCSCEEEECCCS---TTC---
T ss_pred EEeECCCCcCCHHHHHH----HHHcCCCEEEECCcCCc----CHHHHHHHHHHhcC---cCCCEEEecCCH---HHh---
Confidence 44457777778777766 46899999999998886 88888888887776 478998877643 222
Q ss_pred HHHHhCCCCEEEEc
Q 018253 147 EQGFAVGMHAALHI 160 (359)
Q Consensus 147 ~~a~~~Gadav~v~ 160 (359)
..|+|++++.
T Consensus 78 ----~~gaD~il~p 87 (235)
T 3w01_A 78 ----MPGFDFYFVP 87 (235)
T ss_dssp ----CTTCSEEEEE
T ss_pred ----hcCCCEEEEc
Confidence 4599999875
No 186
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.90A {Pyrococcus horikoshii} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=87.57 E-value=5.4 Score=39.32 Aligned_cols=112 Identities=11% Similarity=0.025 Sum_probs=77.6
Q ss_pred eeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CccCcCCCCHHHHHHHHHHHHH----hhCCCcEEEEecCCCCH
Q 018253 65 AIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNST 139 (359)
Q Consensus 65 al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~~LT~~Er~~li~~~v~----~~~grvpViagvg~~st 139 (359)
-+-|-+++.--+.-+.+.+.+-.+...|+|=+ =.- .-+....+..+||...+-.+++ .++.+.-..+++++. .
T Consensus 154 l~gtiiKPklGLs~~~~a~~~ye~~~GGlDfi-KDDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiTa~-~ 231 (430)
T 2d69_A 154 LTATVPKPKMGWSVEEYAEIAYELWSGGIDLL-KDDENFTSFPFNRFEERVRKLYRVRDRVEAETGETKEYLINITGP-V 231 (430)
T ss_dssp EEEECCSSSSCCCHHHHHHHHHHHHHTTCSEE-ECCTTCSCBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEECBCCSS-H
T ss_pred eEEeecCCccCCCHHHHHHHHHHHHhCCCcEe-ECCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCccEEEeecCCC-H
Confidence 34445566555899999999999999999943 222 3456677889999876555544 344444456689886 9
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHH
Q 018253 140 REAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDS 178 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~ 178 (359)
+|.+++++.+.++|+.++|+-+-.+.-..-..+.++.+.
T Consensus 232 ~em~~Ra~~a~e~G~~~~mvd~~~~G~~a~~~l~~~~r~ 270 (430)
T 2d69_A 232 NIMEKRAEMVANEGGQYVMIDIVVAGWSALQYMREVTED 270 (430)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEeeccChHHHHHHHHHhhc
Confidence 999999999999999999987322222223455555544
No 187
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=87.48 E-value=0.77 Score=43.63 Aligned_cols=119 Identities=14% Similarity=0.157 Sum_probs=58.9
Q ss_pred cCCceEEeeecCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-CccCcCCCC-HHHHHHHH---HHHHHhhCCCcEEE
Q 018253 58 KALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMS-WDEHIMLI---GHTVNCFGASVKVI 131 (359)
Q Consensus 58 ~~~Gi~~al~TPF~~dg~-ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~~LT-~~Er~~li---~~~v~~~~grvpVi 131 (359)
+..||+-..+=-|.+.|+ .|.+...++++.+++.|++-|=++| ||.-+...+ .||..+++ +.+.+.. .++||-
T Consensus 43 ~vMGIlNvTPDSFsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~-~~vpIS 121 (318)
T 2vp8_A 43 LIMAIVNRTPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAY-PDQLIS 121 (318)
T ss_dssp EEEEEEC--------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHS-TTCEEE
T ss_pred EEEEEEeCCCCcccCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhC-CCCeEE
Confidence 355665543333877775 6889999999999999999999998 442223455 55555664 3333322 156765
Q ss_pred EecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 132 GNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 132 agvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
+-+. ..+ -++.|.++|+|-+--+.-. . .+ +-+..+++. .|+++-+.
T Consensus 122 IDT~--~~~----VaeaAl~aGa~iINDVsg~--~--d~---~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 122 VDTW--RAQ----VAKAACAAGADLINDTWGG--V--DP---AMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp EECS--CHH----HHHHHHHHTCCEEEETTSS--S--ST---THHHHHHHHTCEEEEECC
T ss_pred EeCC--CHH----HHHHHHHhCCCEEEECCCC--C--ch---HHHHHHHHhCCCEEEECC
Confidence 5443 332 3344445599855444322 1 22 334445554 78888775
No 188
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=87.46 E-value=13 Score=34.00 Aligned_cols=163 Identities=17% Similarity=0.086 Sum_probs=103.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC-CcEE--EEec--CCCCHHHHHHHHHHH
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKV--IGNT--GSNSTREAIHATEQG 149 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g-rvpV--iagv--g~~st~~ai~la~~a 149 (359)
.-..+.++++++...+.|+.++++.-+. +..+.+...+ .++| ++|. |..+++.-+.-++.|
T Consensus 55 ~~t~~~I~~lc~eA~~~~~aaVCV~p~~--------------V~~a~~~L~gs~v~v~tVigFP~G~~~~~~Kv~Ea~~A 120 (260)
T 3r12_A 55 FATPDDIKKLCLEARENRFHGVCVNPCY--------------VKLAREELEGTDVKVVTVVGFPLGANETRTKAHEAIFA 120 (260)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEECGGG--------------HHHHHHHHTTSCCEEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEECHHH--------------HHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHH
Confidence 3456889999999999999999986542 2333343333 3454 3353 556788888899999
Q ss_pred HhCCCCEEEEcCCCC-C-CCCHHHHHHHHHHHHhc---CCe-EEEeCCCCCCCCCCHHHHHHHhc---CCCeEEEeccCc
Q 018253 150 FAVGMHAALHINPYY-G-KTSLEGLISHFDSVLSM---GPT-IIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGVKECVG 220 (359)
Q Consensus 150 ~~~Gadav~v~pP~y-~-~~s~~~l~~yf~~Ia~a---~Pi-iiYn~P~~tg~~ls~e~l~~La~---~pnivGiK~ss~ 220 (359)
.+.|||.+-++.++- . .-+.+.+.+-.++|.++ .|+ +|+. |+ .|+.+.+.+.++ .-..--||-|+|
T Consensus 121 i~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlE----t~-~Lt~eei~~A~~ia~eaGADfVKTSTG 195 (260)
T 3r12_A 121 VESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIE----TC-YLDTEEKIAACVISKLAGAHFVKTSTG 195 (260)
T ss_dssp HHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECC----GG-GCCHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred HHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEe----CC-CCCHHHHHHHHHHHHHhCcCEEEcCCC
Confidence 999999997776653 2 24667788888888765 232 2332 23 578887776553 356667899876
Q ss_pred ---------hhh-HhhhhCCceEE--EecCC--chhhhhhhhcCCc--eeecc
Q 018253 221 ---------NDR-VEHYTGNGIVV--WSGND--DQCHDARWNHGAT--GVISV 257 (359)
Q Consensus 221 ---------d~~-l~~~~~~~~~v--~~G~d--~~~~~~~l~~Ga~--G~is~ 257 (359)
|.+ +++..++++.| -.|-- +.++ .++.+|++ |.-++
T Consensus 196 f~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al-~mi~aGA~RiGtS~g 247 (260)
T 3r12_A 196 FGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAV-KMIMYGADRIGTSSG 247 (260)
T ss_dssp SSSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHH-HHHHTTCSEEEESCH
T ss_pred CCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHH-HHHHcCCceeecchH
Confidence 223 33444554444 33332 2233 45788998 76544
No 189
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=87.42 E-value=1 Score=41.83 Aligned_cols=114 Identities=13% Similarity=0.179 Sum_probs=83.2
Q ss_pred CCceEE--eeecCCC-C-CCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec
Q 018253 59 ALRLIT--AIKTPYL-P-DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT 134 (359)
Q Consensus 59 ~~Gi~~--al~TPF~-~-dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv 134 (359)
-.|+-+ .+.|-|. + .+..|.+.+.++++.+.+.|++.|.+.=|.|- +++++..++++.+.+.++ .+|+-++.
T Consensus 131 ~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~---~~P~~~~~lv~~l~~~~~-~~~l~~H~ 206 (295)
T 1ydn_A 131 NDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGR---GTPDTVAAMLDAVLAIAP-AHSLAGHY 206 (295)
T ss_dssp HTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSC---CCHHHHHHHHHHHHTTSC-GGGEEEEE
T ss_pred HcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCC---cCHHHHHHHHHHHHHhCC-CCeEEEEE
Confidence 456443 3555553 2 35789999999999999999999999988885 899999999999988764 47777765
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcC------CCC----CCCCHHHHHHHHH
Q 018253 135 GSNSTREAIHATEQGFAVGMHAALHIN------PYY----GKTSLEGLISHFD 177 (359)
Q Consensus 135 g~~st~~ai~la~~a~~~Gadav~v~p------P~y----~~~s~~~l~~yf~ 177 (359)
+++..-+++.+..|.++|++.+=+.- ||. ...+-++++.+++
T Consensus 207 -Hn~~Gla~an~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~ 258 (295)
T 1ydn_A 207 -HDTGGRALDNIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLH 258 (295)
T ss_dssp -BCTTSCHHHHHHHHHHHTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHH
T ss_pred -CCCcchHHHHHHHHHHhCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHH
Confidence 33445666777888899999886642 332 1244566666655
No 190
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=87.38 E-value=3.3 Score=38.49 Aligned_cols=108 Identities=8% Similarity=0.008 Sum_probs=66.4
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCC-CHHH--------HHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHH-h
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLM-SWDE--------HIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGF-A 151 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~L-T~~E--------r~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~-~ 151 (359)
+.+++.+-+.||+..++.++.+-+... ..++ -..+.+ +++..++|.--++++--...+++++..+++. +
T Consensus 57 ~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~-~~~~~p~r~~~~~~l~~~~~~~a~~el~~~~~~ 135 (336)
T 2wm1_A 57 EVRIREMDQKGVTVQALSTVPVMFSYWAKPEDTLNLCQLLNNDLAS-TVVSYPRRFVGLGTLPMQAPELAVKEMERCVKE 135 (336)
T ss_dssp HHHHHHHHHHTCCEEEEECCGGGGCTTSCHHHHHHHHHHHHHHHHH-HHHHSTTTEEEEECCCTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECCCchhhcccCCHHHHHHHHHHHHHHHHH-HHHhccCceeEEEeCCCcCHHHHHHHHHHHHHc
Confidence 455566667899998888765432222 2322 122232 3333456655555565556667888777776 6
Q ss_pred CCCCEEEEcCCCCC-CCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 152 VGMHAALHINPYYG-KTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 152 ~Gadav~v~pP~y~-~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
.|+.++-+.+-+.. ..+.+.+...|+.+.+. +||+++-.
T Consensus 136 ~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~ 176 (336)
T 2wm1_A 136 LGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPW 176 (336)
T ss_dssp SCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECC
T ss_pred cCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCC
Confidence 79999976543221 23456678888887776 89998854
No 191
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=87.38 E-value=3.9 Score=41.13 Aligned_cols=67 Identities=10% Similarity=0.141 Sum_probs=47.7
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v 159 (359)
.+.++.++++|++.+.+..+.|- .+.-.++++.+.+..+ .+||++|--. +.+.++.+.++|+|++.+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~-----~~~v~~~i~~i~~~~~-~~~vi~g~v~-----t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGH-----SQGVIDKVKEVRAKYP-SLNIIAGNVA-----TAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT-----SHHHHHHHHHHHHHCT-TSEEEEEEEC-----SHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhhccceEEecccccc-----hhhhhhHHHHHHHhCC-CceEEeeeec-----cHHHHHHHHHhCCCEEEE
Confidence 44477889999999998877652 2334557777777664 5788885322 345578888899999987
No 192
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=87.34 E-value=3.1 Score=39.10 Aligned_cols=101 Identities=15% Similarity=0.055 Sum_probs=62.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
+.+.++.+++.|++++.+.+. + . .++++.+.+. .++|+..+. +. +.++.+.+.|+|++.+.
T Consensus 85 ~~~~~~~~~~~g~d~V~~~~g--~----p----~~~~~~l~~~---gi~vi~~v~--t~----~~a~~~~~~GaD~i~v~ 145 (328)
T 2gjl_A 85 YAEYRAAIIEAGIRVVETAGN--D----P----GEHIAEFRRH---GVKVIHKCT--AV----RHALKAERLGVDAVSID 145 (328)
T ss_dssp HHHHHHHHHHTTCCEEEEEES--C----C----HHHHHHHHHT---TCEEEEEES--SH----HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEcCC--C----c----HHHHHHHHHc---CCCEEeeCC--CH----HHHHHHHHcCCCEEEEE
Confidence 567888889999999987653 2 2 2344444442 578887774 33 44567888999999997
Q ss_pred CCCCCCC-C--HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-CHHHHHHHh
Q 018253 161 NPYYGKT-S--LEGLISHFDSVLSM--GPTIIYNVPSRTGQDI-PPRVIHTMA 207 (359)
Q Consensus 161 pP~y~~~-s--~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~l-s~e~l~~La 207 (359)
.+..... . ...-.+.+.++.+. .||+.= | .| +++.+.+..
T Consensus 146 g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaa------G-GI~~~~~v~~al 191 (328)
T 2gjl_A 146 GFECAGHPGEDDIPGLVLLPAAANRLRVPIIAS------G-GFADGRGLVAAL 191 (328)
T ss_dssp CTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEE------S-SCCSHHHHHHHH
T ss_pred CCCCCcCCCCccccHHHHHHHHHHhcCCCEEEE------C-CCCCHHHHHHHH
Confidence 6543211 1 01234666777765 576543 2 35 566676654
No 193
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=87.20 E-value=2.5 Score=37.81 Aligned_cols=170 Identities=11% Similarity=0.010 Sum_probs=94.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcC-CCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQ-LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~-~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Ga 154 (359)
.|+..+.+.++.+.+.|++-+-+--.-|.|. .+|.-. ++++...+.. +.|+.+..--++.+ ++.+.+.++||
T Consensus 14 ~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~--~~v~~lr~~~--~~~~~vhlmv~dp~---~~i~~~~~aGa 86 (230)
T 1tqj_A 14 ADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGP--LIVDAIRPLT--KKTLDVHLMIVEPE---KYVEDFAKAGA 86 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCH--HHHHHHGGGC--CSEEEEEEESSSGG---GTHHHHHHHTC
T ss_pred cCHhHHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhH--HHHHHHHhhc--CCcEEEEEEccCHH---HHHHHHHHcCC
Confidence 4578889999999999999875555566654 555533 6666666554 45776655445543 36688888999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc-C-CeEEEeCCCCCCCCCCHHHHHHHhcCCCeE----------EEeccCch-
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM-G-PTIIYNVPSRTGQDIPPRVIHTMAQSPNLA----------GVKECVGN- 221 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a-~-PiiiYn~P~~tg~~ls~e~l~~La~~pniv----------GiK~ss~d- 221 (359)
|++.+..=.. . + +...+..+.+.+. . ..+.- +|.. +.+.++.+.+....+ |-|.....
T Consensus 87 dgv~vh~e~~-~-~-~~~~~~~~~i~~~g~~~gv~~-~p~t-----~~e~~~~~~~~~D~v~~msv~pg~ggq~~~~~~~ 157 (230)
T 1tqj_A 87 DIISVHVEHN-A-S-PHLHRTLCQIRELGKKAGAVL-NPST-----PLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVL 157 (230)
T ss_dssp SEEEEECSTT-T-C-TTHHHHHHHHHHTTCEEEEEE-CTTC-----CGGGGTTTGGGCSEEEEESSCC----CCCCGGGH
T ss_pred CEEEECcccc-c-c-hhHHHHHHHHHHcCCcEEEEE-eCCC-----cHHHHHHHHhcCCEEEEEEeccccCCccCcHHHH
Confidence 9997762100 1 1 3455666666554 2 22222 4431 123344443222233 32211111
Q ss_pred h---hHhhhh-----CCceEEEecCCchhhhhhhhcCCceeecccccc
Q 018253 222 D---RVEHYT-----GNGIVVWSGNDDQCHDARWNHGATGVISVTSNL 261 (359)
Q Consensus 222 ~---~l~~~~-----~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~ 261 (359)
. ++++.. +..+.+-.|-...-......+|++|++.|.+-+
T Consensus 158 ~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aGad~vvvGSai~ 205 (230)
T 1tqj_A 158 PKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGSAVF 205 (230)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESHHHH
T ss_pred HHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcCCCEEEECHHHH
Confidence 1 233333 334555556444344444677999999987644
No 194
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=87.12 E-value=4.1 Score=39.13 Aligned_cols=69 Identities=22% Similarity=0.116 Sum_probs=46.0
Q ss_pred HHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHH----HHHHHhhCC-----CcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 018253 84 LVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLI----GHTVNCFGA-----SVKVIGNTGSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li----~~~v~~~~g-----rvpViagvg~~st~~ai~la~~a~~~Ga 154 (359)
+++.++++|++++.+.-+.|. .||.++..+.+ +.+++.+.. .+|+|....+. . .+.....+.|+
T Consensus 202 y~~~qi~aGad~i~ifDs~~~--~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~g~--~---~~l~~l~~~g~ 274 (368)
T 4exq_A 202 YLNAQIEAGAQAVMIFDTWGG--ALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGG--G---LWLEDLAATGV 274 (368)
T ss_dssp HHHHHHHHTCSEEEEEETTGG--GSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEETTC--G---GGHHHHHTSSC
T ss_pred HHHHHHHhCCCEEEEeCCccc--cCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcCCc--H---HHHHHHHHhCC
Confidence 344467899999999888764 78988877764 344555554 48887655432 2 23344567899
Q ss_pred CEEEE
Q 018253 155 HAALH 159 (359)
Q Consensus 155 dav~v 159 (359)
|++.+
T Consensus 275 d~i~~ 279 (368)
T 4exq_A 275 DAVGL 279 (368)
T ss_dssp SEEEC
T ss_pred CEEee
Confidence 98764
No 195
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=87.08 E-value=1.1 Score=41.55 Aligned_cols=83 Identities=8% Similarity=-0.018 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHHH-CCCCEEEEccCcc------CcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHH
Q 018253 77 DLEAYDDLVNMQIV-NGAEGMIVGGTTG------EGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQG 149 (359)
Q Consensus 77 D~~~l~~li~~li~-~Gv~Gl~v~GstG------E~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a 149 (359)
+.+.+.+.++.+.+ .|+++|-++-+.- -.+--+.+.-.++++.+.+.+ .+||++-+.. +..+..++++.+
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~--~~pv~vk~~~-~~~~~~~~a~~l 185 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS--KVPLYVKLSP-NVTDIVPIAKAV 185 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC--SSCEEEEECS-CSSCSHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc--CCCEEEEECC-ChHHHHHHHHHH
Confidence 57889999988877 9999998764421 111124455577777777765 4789886652 223556778999
Q ss_pred HhCCCCEEEEcCC
Q 018253 150 FAVGMHAALHINP 162 (359)
Q Consensus 150 ~~~Gadav~v~pP 162 (359)
+++|+|++.+...
T Consensus 186 ~~~G~d~i~v~~~ 198 (311)
T 1ep3_A 186 EAAGADGLTMINT 198 (311)
T ss_dssp HHTTCSEEEECCC
T ss_pred HHcCCCEEEEeCC
Confidence 9999999999753
No 196
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=87.07 E-value=4.9 Score=38.30 Aligned_cols=125 Identities=6% Similarity=-0.048 Sum_probs=75.1
Q ss_pred CCHHHHHHHHHH-------HHHCCCCEEEEccCc----------------cCcCCCCHHHHHH----HHHHHHHhhCCCc
Q 018253 76 FDLEAYDDLVNM-------QIVNGAEGMIVGGTT----------------GEGQLMSWDEHIM----LIGHTVNCFGASV 128 (359)
Q Consensus 76 ID~~~l~~li~~-------li~~Gv~Gl~v~Gst----------------GE~~~LT~~Er~~----li~~~v~~~~grv 128 (359)
+..+.++++++. ..++|.|||=+.|.. .|+- =|.+.|.+ +++.+++.++.+.
T Consensus 133 mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yG-GslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 133 LSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYG-NSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTS-SSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred cCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhc-cchHhHHHHHHHHHHHHHhcCCccC
Confidence 555555555554 456899999998753 2322 25667754 4555555566677
Q ss_pred EEEEecC-------CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCC----CHHHHHHHHHHHHhc--CCeEEEeCCCCCC
Q 018253 129 KVIGNTG-------SNSTREAIHATEQGFAVGMHAALHINPYYGKT----SLEGLISHFDSVLSM--GPTIIYNVPSRTG 195 (359)
Q Consensus 129 pViagvg-------~~st~~ai~la~~a~~~Gadav~v~pP~y~~~----s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg 195 (359)
||.+=++ +.+.++++++++..+++ +|.+-+....+... .+..-..+.+.|.+. .||+.= |
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~------G 284 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAV------G 284 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEE------S
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCccccee------e
Confidence 8877433 34689999999999999 99998853322110 011123344445443 566542 3
Q ss_pred CCCCHHHHHHHhc
Q 018253 196 QDIPPRVIHTMAQ 208 (359)
Q Consensus 196 ~~ls~e~l~~La~ 208 (359)
---+++..+++.+
T Consensus 285 gi~t~e~Ae~~l~ 297 (343)
T 3kru_A 285 LITTQELAEEILS 297 (343)
T ss_dssp SCCCHHHHHHHHH
T ss_pred eeeHHHHHHHHHh
Confidence 2346777777653
No 197
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=87.05 E-value=1.7 Score=41.15 Aligned_cols=114 Identities=17% Similarity=0.073 Sum_probs=86.8
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC--CcEEEEecCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA--SVKVIGNTGS 136 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g--rvpViagvg~ 136 (359)
-.|+-+..-.| ..++.|.+-+.++++.+.+.|++-|.+.-|+|= +++.+-.++++.+.+.+++ ++|+=++. +
T Consensus 133 ~~g~~v~f~~~--d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~~~~~~i~~H~-H 206 (325)
T 3eeg_A 133 KVVHEVEFFCE--DAGRADQAFLARMVEAVIEAGADVVNIPDTTGY---MLPWQYGERIKYLMDNVSNIDKAILSAHC-H 206 (325)
T ss_dssp TTSSEEEEEEE--TGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSC---CCHHHHHHHHHHHHHHCSCGGGSEEEECB-C
T ss_pred HCCCEEEEEcc--ccccchHHHHHHHHHHHHhcCCCEEEecCccCC---cCHHHHHHHHHHHHHhCCCCCceEEEEEe-C
Confidence 45655544444 256899999999999999999999999999996 8999999999999988864 36665544 5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCC----CCCCHHHHHHHHHH
Q 018253 137 NSTREAIHATEQGFAVGMHAALHINPYY----GKTSLEGLISHFDS 178 (359)
Q Consensus 137 ~st~~ai~la~~a~~~Gadav~v~pP~y----~~~s~~~l~~yf~~ 178 (359)
++..-++..+-.|.++|++.+=..---+ ...+-++++..++.
T Consensus 207 nd~GlA~AN~laA~~aGa~~vd~tv~GlGer~GN~~lE~vv~~L~~ 252 (325)
T 3eeg_A 207 NDLGLATANSLAALQNGARQVECTINGIGERAGNTALEEVVMAMEC 252 (325)
T ss_dssp CTTSCHHHHHHHHHHHTCCEEEEBGGGCCSTTCCCBHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCCCEEEEecccccccccchhHHHHHHHHHh
Confidence 6778899999999999999986654333 23455666666654
No 198
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=86.94 E-value=1.6 Score=40.74 Aligned_cols=89 Identities=13% Similarity=0.054 Sum_probs=64.5
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCC
Q 018253 126 ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRT 194 (359)
Q Consensus 126 grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p---------P~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~t 194 (359)
++.-++.++.... .|+.++++|+|++++-. |.-...|.++++.|-+.|++. .|+++=|.|. -
T Consensus 33 g~~i~~~tayDa~------sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pf-g 105 (281)
T 1oy0_A 33 GHKWAMLTAYDYS------TARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPF-G 105 (281)
T ss_dssp TCCEEEEECCSHH------HHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCT-T
T ss_pred CCcEEEEeCcCHH------HHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCC-C
Confidence 4434566666533 46677789999998743 223345789999999999986 5888899994 4
Q ss_pred CCCCCHHHH----HHHhcCCCeEEEeccCch
Q 018253 195 GQDIPPRVI----HTMAQSPNLAGVKECVGN 221 (359)
Q Consensus 195 g~~ls~e~l----~~La~~pnivGiK~ss~d 221 (359)
++..+++.. .++.+--...|+|.+.+.
T Consensus 106 sy~~s~~~a~~na~rl~~eaGa~aVklEdg~ 136 (281)
T 1oy0_A 106 SYEAGPTAALAAATRFLKDGGAHAVKLEGGE 136 (281)
T ss_dssp SSTTCHHHHHHHHHHHHHTTCCSEEEEEBSG
T ss_pred cccCCHHHHHHHHHHHHHHhCCeEEEECCcH
Confidence 666777753 566666789999988775
No 199
>2oem_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; rubisco-like protein, isomerase; HET: KCX 1AE; 1.70A {Geobacillus kaustophilus} PDB: 2oel_A* 2oek_A* 2oej_A
Probab=86.91 E-value=6.2 Score=38.70 Aligned_cols=92 Identities=12% Similarity=0.052 Sum_probs=69.1
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CccCcCCCCHHHHHHHHHHHHH----hhCCCcEEEEecCCCCHHH
Q 018253 67 KTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNSTRE 141 (359)
Q Consensus 67 ~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~~LT~~Er~~li~~~v~----~~~grvpViagvg~~st~~ 141 (359)
-|-+++.--+.-+.+.+.+-.+...|+|=+ =.- .-+....+.++||...+-.+++ .++.+.-..++++ .+.+|
T Consensus 143 gtiiKPklGls~~~~a~~~ye~~~GGlDfi-KDDE~~~~qpf~p~~eR~~~v~eai~ra~~eTGe~k~~~~NiT-~~~~e 220 (413)
T 2oem_A 143 MSIFKGMIGRDLAYLTSELKKQALGGVDLV-KDDEILFDSELLPFEKRITEGKAALQEVYEQTGKRTLYAVNLT-GKTFA 220 (413)
T ss_dssp EEECCSCTTCCHHHHHHHHHHHHHTTCSEE-ECCTTCCCCSSSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC-SCGGG
T ss_pred EeecCccccCCHHHHHHHHHHHHhCCCcee-eCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCcceeeCcCC-CCHHH
Confidence 344455555889999999999999999943 232 3456667899999875544444 3444444567998 59999
Q ss_pred HHHHHHHHHhCCCCEEEEc
Q 018253 142 AIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~ 160 (359)
.+++++.++++|+.++|+-
T Consensus 221 m~~Ra~~a~e~G~~~~mvd 239 (413)
T 2oem_A 221 LKDKAKRAAELGADVLLFN 239 (413)
T ss_dssp HHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHhCCCeEEEe
Confidence 9999999999999999986
No 200
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=86.81 E-value=13 Score=33.11 Aligned_cols=132 Identities=11% Similarity=0.052 Sum_probs=77.3
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcC---CCCHHHHHHHHHHHHHhhCCCc-EEEEe------cCCCC-------HHHHH
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQ---LMSWDEHIMLIGHTVNCFGASV-KVIGN------TGSNS-------TREAI 143 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~---~LT~~Er~~li~~~v~~~~grv-pViag------vg~~s-------t~~ai 143 (359)
+...++...+.|.+|+=+.....+.+ .++.++..++-+.+.+ .+=++ .+.++ .++.+ .+...
T Consensus 14 ~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~ 92 (287)
T 2x7v_A 14 FDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKK-HGIDWENAFCHSGYLINLASPKDDIWQKSVELLK 92 (287)
T ss_dssp GGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHH-HTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHH-cCCCcceeEEecccccccCCCCHHHHHHHHHHHH
Confidence 56677888899999998865433332 4566676666655444 33221 13332 22222 23455
Q ss_pred HHHHHHHhCCCCEEEEcCCCCCCCCH----HHHHHHHHHHHhc---CCeEEEeCCCCCC-CCCCHHHHHHHh-cC---CC
Q 018253 144 HATEQGFAVGMHAALHINPYYGKTSL----EGLISHFDSVLSM---GPTIIYNVPSRTG-QDIPPRVIHTMA-QS---PN 211 (359)
Q Consensus 144 ~la~~a~~~Gadav~v~pP~y~~~s~----~~l~~yf~~Ia~a---~PiiiYn~P~~tg-~~ls~e~l~~La-~~---pn 211 (359)
+.++.|+++|+..+.+.+.+....+. +.+.+.++++++. +.+.+-|.+.... ..-+++.+.+|. +. |+
T Consensus 93 ~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~~~~~~~ 172 (287)
T 2x7v_A 93 KEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGYKLEQLKKIRDLVDQRDR 172 (287)
T ss_dssp HHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCCTTEECSSHHHHHHHHHHCSCGGG
T ss_pred HHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCCCCccCCCHHHHHHHHHhcCCCCC
Confidence 67788899999988776554433232 3456666777654 3567777664211 223788888877 34 55
Q ss_pred eE
Q 018253 212 LA 213 (359)
Q Consensus 212 iv 213 (359)
+.
T Consensus 173 vg 174 (287)
T 2x7v_A 173 VA 174 (287)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 201
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=86.72 E-value=2.5 Score=41.03 Aligned_cols=81 Identities=16% Similarity=0.170 Sum_probs=65.3
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEcc-CccCcCCCCHHHHHHHHHHHHHhhCCCcEE-EEecCCCCHHHHHHHHHHHH
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVNCFGASVKV-IGNTGSNSTREAIHATEQGF 150 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~~LT~~Er~~li~~~v~~~~grvpV-iagvg~~st~~ai~la~~a~ 150 (359)
.|..+.+--++-++.+.+.+.+|+.+.| +.|| +.+|+.++++.+.+..+...|. +.|+| +..+.++. .
T Consensus 196 QGg~~~dLR~~sa~~l~~~~~~GyaIGGlsvGe----~~~~~~~~l~~~~~~LP~~kPRyLmGvG--~P~~il~~----V 265 (381)
T 2ash_A 196 QGGIYPDLRRESALQLTSIGFDGYAIGGLSIGE----ERSLTLEMTEVTVEFLPEDKPRYFMGGG--SPELILEL----V 265 (381)
T ss_dssp CCTTCHHHHHHHHHHHHTTCCSEEEECSCSSSS----CHHHHHHHHHHHHTTSCTTSCEEECSCC--CHHHHHHH----H
T ss_pred cCCCCHHHHHHHHHHHHhcCCceEEecCcccCC----CHHHHHHHHHHHHhhCCCCCcEEEcCCC--CHHHHHHH----H
Confidence 6778888888888999999999999999 7888 7899999999999988877785 55886 46665554 4
Q ss_pred hCCCCEEEEcCCC
Q 018253 151 AVGMHAALHINPY 163 (359)
Q Consensus 151 ~~Gadav~v~pP~ 163 (359)
+.|+|-.=.+.|.
T Consensus 266 ~~GvDmFDcv~Pt 278 (381)
T 2ash_A 266 DRGVDMFDSVFPT 278 (381)
T ss_dssp TTTCCEEEESHHH
T ss_pred HcCCCEEeCChhh
Confidence 5899977666553
No 202
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=86.71 E-value=8.1 Score=37.20 Aligned_cols=159 Identities=15% Similarity=0.075 Sum_probs=93.7
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
+++..+...|-=|++- ..+|.+|..+.++.+.+. ++..|-++++.. .+..+.++.+.++|+|.+.+-..
T Consensus 61 ~lA~avA~aGGlg~i~-------~~~s~e~~~~~i~~vk~~--~~l~vga~vg~~--~~~~~~~~~lieaGvd~I~idta 129 (366)
T 4fo4_A 61 RLAIALAQEGGIGFIH-------KNMSIEQQAAQVHQVKIS--GGLRVGAAVGAA--PGNEERVKALVEAGVDVLLIDSS 129 (366)
T ss_dssp HHHHHHHHTTCEEEEC-------SSSCHHHHHHHHHHHHTT--TSCCCEEECCSC--TTCHHHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHcCCceEee-------cCCCHHHHHHHHHHHHhc--CceeEEEEeccC--hhHHHHHHHHHhCCCCEEEEeCC
Confidence 5666666666555552 147999999999887764 355566665532 35677788899999998877433
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEecc----C----------chh---
Q 018253 163 YYGKTSLEGLISHFDSVLSM---GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKEC----V----------GND--- 222 (359)
Q Consensus 163 ~y~~~s~~~l~~yf~~Ia~a---~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK~s----s----------~d~--- 222 (359)
.- ..+...+..+.+.+. .|++.-| ..+++...++.+. .+-+||.. + +.+
T Consensus 130 ~G---~~~~~~~~I~~ik~~~p~v~Vi~G~-------v~t~e~A~~a~~a-GAD~I~vG~gpGs~~~tr~~~g~g~p~~~ 198 (366)
T 4fo4_A 130 HG---HSEGVLQRIRETRAAYPHLEIIGGN-------VATAEGARALIEA-GVSAVKVGIGPGSICTTRIVTGVGVPQIT 198 (366)
T ss_dssp CT---TSHHHHHHHHHHHHHCTTCEEEEEE-------ECSHHHHHHHHHH-TCSEEEECSSCSTTBCHHHHHCCCCCHHH
T ss_pred CC---CCHHHHHHHHHHHHhcCCCceEeee-------eCCHHHHHHHHHc-CCCEEEEecCCCCCCCcccccCcccchHH
Confidence 21 124566677777665 4666643 4578888887643 22223331 0 001
Q ss_pred ---hHhhhh-CCceEEEe--cC-CchhhhhhhhcCCceeecccccccH
Q 018253 223 ---RVEHYT-GNGIVVWS--GN-DDQCHDARWNHGATGVISVTSNLVP 263 (359)
Q Consensus 223 ---~l~~~~-~~~~~v~~--G~-d~~~~~~~l~~Ga~G~is~~an~~P 263 (359)
.+.+.. ..++.|+. |- +..-+..++.+|++|++.+...+..
T Consensus 199 ~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t 246 (366)
T 4fo4_A 199 AIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGT 246 (366)
T ss_dssp HHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTB
T ss_pred HHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcC
Confidence 111111 12455555 44 2222334589999999988776543
No 203
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=86.67 E-value=0.79 Score=40.02 Aligned_cols=67 Identities=12% Similarity=-0.081 Sum_probs=43.1
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
..++.+.+.|++++.+.+..+ .+.-.++++.+.+. .+++++.+.+.. +..+.++.+.+.|+|.+.+.
T Consensus 68 ~~~~~~~~~Gad~v~v~~~~~------~~~~~~~~~~~~~~---g~~~~v~~~~~~--t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 68 FESQLLFDAGADYVTVLGVTD------VLTIQSCIRAAKEA---GKQVVVDMICVD--DLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHHH---TCEEEEECTTCS--SHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCC------hhHHHHHHHHHHHc---CCeEEEEecCCC--CHHHHHHHHHHcCCCEEEEc
Confidence 458888999999999866543 22335566555543 246665533322 24677788888999987554
No 204
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=86.61 E-value=6.7 Score=38.59 Aligned_cols=93 Identities=15% Similarity=0.083 Sum_probs=69.6
Q ss_pred eecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CccCcCCCCHHHHHHHHHHHHH----hhCCCcEEEEecCCCCHH
Q 018253 66 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNSTR 140 (359)
Q Consensus 66 l~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~~LT~~Er~~li~~~v~----~~~grvpViagvg~~st~ 140 (359)
+-|-+++.--+.-+.+.+.+-.+...|+|= +=.- .-+....+.++||...+-.+++ .++.+.-..++++ .+++
T Consensus 156 ~gtiiKPklGLs~~~~a~~~ye~~~GGlDf-iKDDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiT-~~~~ 233 (425)
T 2zvi_A 156 LMSIFKGVIGRDLSDIKEQLRQQALGGVDL-IKDDEIFFETGLAPFETRIAEGKQILKETYEQTGHKTLYAVNLT-GRTA 233 (425)
T ss_dssp EEEECSCCTTCCHHHHHHHHHHHHHTTCSE-EECCTTCCCSSSSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECC-SCGG
T ss_pred EEeecCCcccCCHHHHHHHHHHHHhCCCCe-eeCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhCCcceeeCcCC-CCHH
Confidence 334445555589999999999999999993 3232 4456678899999886655544 3444444567998 5699
Q ss_pred HHHHHHHHHHhCCCCEEEEc
Q 018253 141 EAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 141 ~ai~la~~a~~~Gadav~v~ 160 (359)
|.+++++.++++|+.++|+-
T Consensus 234 em~~Ra~~a~e~G~~~~mvd 253 (425)
T 2zvi_A 234 DLKDKARRAAELGADALLFN 253 (425)
T ss_dssp GHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHhCCCeEEEe
Confidence 99999999999999999986
No 205
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=86.44 E-value=18 Score=32.40 Aligned_cols=133 Identities=9% Similarity=-0.015 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec--------CCCC-------HHHHHH
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT--------GSNS-------TREAIH 144 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv--------g~~s-------t~~ai~ 144 (359)
.+...++.+.+.|.+||=+.... ...++.++..++-+.+.+ . .+.+.++. ++.+ .+...+
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~~~~~~l~~-~--gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~ 92 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASP--LPFYSDIQINELKACAHG-N--GITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTD 92 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTT--GGGCCHHHHHHHHHHHHH-T--TCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCcc--cCCcCHHHHHHHHHHHHH-c--CCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 46777788888999999777643 455677777777665544 3 35555422 1212 234556
Q ss_pred HHHHHHhCCCCEEEE-cCCC----CC-CCCH----HHHHHHHHHHHhc-----CCeEEEeCCCCCCC-CCCHHHHHHHh-
Q 018253 145 ATEQGFAVGMHAALH-INPY----YG-KTSL----EGLISHFDSVLSM-----GPTIIYNVPSRTGQ-DIPPRVIHTMA- 207 (359)
Q Consensus 145 la~~a~~~Gadav~v-~pP~----y~-~~s~----~~l~~yf~~Ia~a-----~PiiiYn~P~~tg~-~ls~e~l~~La- 207 (359)
.++.|+++|++.+.+ +.|. |. ..+. +.+.+.++.+++. +.+.+-|.+...+. --+++.+.+|.
T Consensus 93 ~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 172 (294)
T 3vni_A 93 LLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVK 172 (294)
T ss_dssp HHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHH
T ss_pred HHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHH
Confidence 788888999998874 3332 22 2232 3456666666652 46777877543232 23677777776
Q ss_pred c--CCCeEEEec
Q 018253 208 Q--SPNLAGVKE 217 (359)
Q Consensus 208 ~--~pnivGiK~ 217 (359)
+ .||+.-.=|
T Consensus 173 ~v~~~~vg~~~D 184 (294)
T 3vni_A 173 QVDHNNVKVMLD 184 (294)
T ss_dssp HHCCTTEEEEEE
T ss_pred HcCCCCEEEEEE
Confidence 3 577544444
No 206
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=86.42 E-value=1.9 Score=40.28 Aligned_cols=107 Identities=7% Similarity=-0.024 Sum_probs=70.3
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHH-------HHHhhCCCcE-EEEecCCCCHHHHHHHHHHHH-hCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGH-------TVNCFGASVK-VIGNTGSNSTREAIHATEQGF-AVG 153 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~-------~v~~~~grvp-Viagvg~~st~~ai~la~~a~-~~G 153 (359)
..++.+-+.||++++...+.+.......++-..+.+. +++..++|.. .++.+.-.+.+++++..+++. +.|
T Consensus 45 ~rl~~Md~~Gv~~vl~~~~~~~~~~~d~~~~~~~~r~~N~~l~~~~~~~p~rf~g~~a~vp~~~~~~a~~el~r~~~~~G 124 (312)
T 3ij6_A 45 ERLTKWPDQNTKQVISLANISPEDFTDSKTSAELCQSANEELSNLVDQHPGKFAGAVAILPMNNIESACKVISSIKDDEN 124 (312)
T ss_dssp HHHHTCSCTTEEEEEEECSCCGGGTSCHHHHHHHHHHHHHHHHHHHHHCTTTEEEEEEECCTTCHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCeEEEECCCCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCceeeeEEecCccCHHHHHHHHHHHHHhCC
Confidence 4455555689998887777766555565554444322 2233356654 455555556778888888875 689
Q ss_pred CCEEEEcCCCCC-CCCHHHHHHHHHHHHhc-CCeEEEe
Q 018253 154 MHAALHINPYYG-KTSLEGLISHFDSVLSM-GPTIIYN 189 (359)
Q Consensus 154 adav~v~pP~y~-~~s~~~l~~yf~~Ia~a-~PiiiYn 189 (359)
+.++.+.+.+-. .++...+...|+.+.+. .||.++-
T Consensus 125 ~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~pv~iH~ 162 (312)
T 3ij6_A 125 LVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHP 162 (312)
T ss_dssp EEEEEEESEETTEETTSTTTHHHHHHHHHTTCCEEEEC
T ss_pred CceEeccCCCCCCCCCCccHHHHHHHHHHcCCeEEEcC
Confidence 999987643221 24557788899998887 7998884
No 207
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=86.26 E-value=17 Score=32.16 Aligned_cols=136 Identities=7% Similarity=-0.028 Sum_probs=78.3
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcC---CCCHHHHHHHHHHHHHhhCCCc-EEEE------ecCCCC-------HHHHH
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQ---LMSWDEHIMLIGHTVNCFGASV-KVIG------NTGSNS-------TREAI 143 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~---~LT~~Er~~li~~~v~~~~grv-pVia------gvg~~s-------t~~ai 143 (359)
+...++...+.|.++|=+.......+ .++.++..++-+.+.+ .+=++ .+.+ ..++.+ .+...
T Consensus 14 l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~ 92 (285)
T 1qtw_A 14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEK-YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFI 92 (285)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHH-TTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHH-cCCCceeEEecCCcccccCCCCHHHHHHHHHHHH
Confidence 77888888999999998854333322 3677777766665544 22121 0222 222222 23445
Q ss_pred HHHHHHHhCCCCEEEEcCCCCCCC-CH----HHHHHHHHHHHhc---CCeEEEeCCCCC-CCCCCHHHHHHHh-cC---C
Q 018253 144 HATEQGFAVGMHAALHINPYYGKT-SL----EGLISHFDSVLSM---GPTIIYNVPSRT-GQDIPPRVIHTMA-QS---P 210 (359)
Q Consensus 144 ~la~~a~~~Gadav~v~pP~y~~~-s~----~~l~~yf~~Ia~a---~PiiiYn~P~~t-g~~ls~e~l~~La-~~---p 210 (359)
+.++.|+++|+..+.+.+.+.... +. +.+.+.++.+++. +.+.+=|.+... ...-+++.+.+|. ++ |
T Consensus 93 ~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~~~~ 172 (285)
T 1qtw_A 93 DEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKS 172 (285)
T ss_dssp HHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECCCCCTTBCCSSHHHHHHHHHHCSCGG
T ss_pred HHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEecCCCCCCcccCCHHHHHHHHHhhcCcc
Confidence 667888899999988776654322 32 2355666666543 456677765322 1223678888876 44 5
Q ss_pred CeEEEec
Q 018253 211 NLAGVKE 217 (359)
Q Consensus 211 nivGiK~ 217 (359)
++.-+=|
T Consensus 173 ~~g~~~D 179 (285)
T 1qtw_A 173 RVGVCID 179 (285)
T ss_dssp GEEEEEE
T ss_pred ceEEEEE
Confidence 6543333
No 208
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=86.22 E-value=2.3 Score=42.56 Aligned_cols=68 Identities=19% Similarity=0.217 Sum_probs=49.0
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v 159 (359)
....++.++++|++.+.+..+.|. ...-.+.++.+.+..+ .+||++|-.. +. +.++.+.++|||++.+
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g~-----~~~~~~~v~~i~~~~p-~~~Vi~g~v~-t~----e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHGH-----SKGVIERVRWVKQTFP-DVQVIGGNIA-TA----EAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCCS-----BHHHHHHHHHHHHHCT-TSEEEEEEEC-SH----HHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHhhcccceEEecccCCc-----chhHHHHHHHHHHHCC-CceEEEeeeC-cH----HHHHHHHHcCCCEEEE
Confidence 345577888999999998877764 2344566777777663 5899997322 22 4578889999999998
No 209
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=86.22 E-value=12 Score=35.10 Aligned_cols=117 Identities=14% Similarity=0.101 Sum_probs=82.6
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-----CccCc--CCCCHHHHHHHHHHHHHhhCCCcEEEE
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-----TTGEG--QLMSWDEHIMLIGHTVNCFGASVKVIG 132 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-----stGE~--~~LT~~Er~~li~~~v~~~~grvpVia 132 (359)
.|=...++|.+| ....++++ +.|++++++.| +-|-- -.+|.+|....++.+++.+ ++||++
T Consensus 27 ~~~~i~~~~ayD-------~~sA~l~e---~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~--~~pvia 94 (305)
T 3ih1_A 27 ANEILQIPGAHD-------AMAALVAR---NTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRAT--DLPVLV 94 (305)
T ss_dssp SSSCEEEEBCSS-------HHHHHHHH---HTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHH--CCCEEE
T ss_pred CCCcEEEecCcC-------HHHHHHHH---HcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhc--CCCEEE
Confidence 343445678886 33445444 47999999998 33432 3579999999999888877 479998
Q ss_pred e--cCCCCHHHHHHHHHHHHhCCCCEEEEcCCCC--------CC--CCHHHHHHHHHHHHhc-CCeEEE
Q 018253 133 N--TGSNSTREAIHATEQGFAVGMHAALHINPYY--------GK--TSLEGLISHFDSVLSM-GPTIIY 188 (359)
Q Consensus 133 g--vg~~st~~ai~la~~a~~~Gadav~v~pP~y--------~~--~s~~~l~~yf~~Ia~a-~PiiiY 188 (359)
- .|..+..++.+.++...++||++|-+---.. .+ .+.++..+-.+++.++ .+++|-
T Consensus 95 D~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ 163 (305)
T 3ih1_A 95 DIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIV 163 (305)
T ss_dssp ECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEE
T ss_pred ECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEE
Confidence 4 3434688899999999999999998754322 11 3667888888887776 465554
No 210
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=86.18 E-value=6.8 Score=38.44 Aligned_cols=95 Identities=13% Similarity=0.055 Sum_probs=71.2
Q ss_pred eEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHh----hCCCcEEEEecCCC
Q 018253 62 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSN 137 (359)
Q Consensus 62 i~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~----~~grvpViagvg~~ 137 (359)
++-.++ ++.--+.-+.+.+.+-.+...|+|=+====.-+....+..+||...+-.+++. ++.+.-..+++++.
T Consensus 142 l~gtii---KPklGls~~~~a~~~ye~~~GGlDfiKDDE~l~~q~f~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiTa~ 218 (414)
T 3fk4_A 142 LLMSIF---KGMIGRNIGYLKTQLRDQAIGGVDIVKDDEILFENALTPLTKRIVSGKEVLQSVYETYGHKTLYAVNLTGR 218 (414)
T ss_dssp EEEEEC---SSCTTCCHHHHHHHHHHHHHTTCSEEECCTTCCSCSSSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCSC
T ss_pred eeEeec---ccccCCCHHHHHHHHHHHHhcCCCcCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCcceEEeEcCCC
Confidence 454444 44544889999999999999999954211234467788999998877666654 44444456799885
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEc
Q 018253 138 STREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~ 160 (359)
++|.+++++.+.++|+.++|+-
T Consensus 219 -~~em~~ra~~a~e~G~~~~mvd 240 (414)
T 3fk4_A 219 -TFDLKENAKRAVQAGADILLFN 240 (414)
T ss_dssp -GGGHHHHHHHHHHHTCSEEEEC
T ss_pred -HHHHHHHHHHHHHcCCCEEEEc
Confidence 6999999999999999999875
No 211
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=86.12 E-value=0.75 Score=42.30 Aligned_cols=88 Identities=11% Similarity=0.152 Sum_probs=60.4
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHH------------------------HHHHHCCCCEEEEccCccCcCCCCHHHHH
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLV------------------------NMQIVNGAEGMIVGGTTGEGQLMSWDEHI 114 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li------------------------~~li~~Gv~Gl~v~GstGE~~~LT~~Er~ 114 (359)
-.|.=-.++=.+++||+||.+.+++++ ++|++.|++-|+.-|... |..|-.
T Consensus 84 ~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~-----~a~~g~ 158 (256)
T 1twd_A 84 ELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKS-----DALQGL 158 (256)
T ss_dssp HTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSS-----STTTTH
T ss_pred HcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCC-----CHHHHH
Confidence 444444455555679999999998885 558889999999666532 456666
Q ss_pred HHHHHHHHhhCCCcEEEEecC--CCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 115 MLIGHTVNCFGASVKVIGNTG--SNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 115 ~li~~~v~~~~grvpViagvg--~~st~~ai~la~~a~~~Gadav~v 159 (359)
.+++..++.++ ++.|++|-| ..+..+-+ +.|++.+-.
T Consensus 159 ~~L~~Lv~~a~-~i~Im~GgGv~~~Ni~~l~-------~tGv~e~H~ 197 (256)
T 1twd_A 159 SKIMELIAHRD-APIIMAGAGVRAENLHHFL-------DAGVLEVHS 197 (256)
T ss_dssp HHHHHHHTSSS-CCEEEEESSCCTTTHHHHH-------HHTCSEEEE
T ss_pred HHHHHHHHhhC-CcEEEecCCcCHHHHHHHH-------HcCCCeEeE
Confidence 77777777666 899998654 44444321 467777764
No 212
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=85.95 E-value=4.6 Score=38.38 Aligned_cols=93 Identities=13% Similarity=0.056 Sum_probs=57.2
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec---CCCCHHHHHHHHHHHHhCCCCEEE
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT---GSNSTREAIHATEQGFAVGMHAAL 158 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv---g~~st~~ai~la~~a~~~Gadav~ 158 (359)
.+.++...++|++++.+.-+..|. ++-.+.++.+.+. + ..+++.+ ...+.+..++.++.+.++|++.+.
T Consensus 96 ~~~i~~a~~aGvd~v~I~~~~s~~-----~~~~~~i~~ak~~-G--~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~ 167 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVATHCTEA-----DVSKQHIEYARNL-G--MDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIY 167 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEEETTCG-----GGGHHHHHHHHHH-T--CEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCcCEEEEEEeccHH-----HHHHHHHHHHHHC-C--CEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 346777778899998887655543 3444555554442 2 3344443 344567788888888888888665
Q ss_pred EcCCCCCCCCHHHHHHHHHHHHhcC
Q 018253 159 HINPYYGKTSLEGLISHFDSVLSMG 183 (359)
Q Consensus 159 v~pP~y~~~s~~~l~~yf~~Ia~a~ 183 (359)
+.-- ....+++++.+.++.+.+..
T Consensus 168 l~DT-~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 168 MADS-GGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp EECT-TCCCCHHHHHHHHHHHHHHS
T ss_pred ECCC-cCccCHHHHHHHHHHHHHhc
Confidence 5432 33345677777777776643
No 213
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=85.95 E-value=16 Score=35.66 Aligned_cols=134 Identities=10% Similarity=-0.018 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHHH-------HHHCCCCEEEEccCcc--------CcCCC-------CH-HHHHHHHH----HHHHhh---
Q 018253 75 RFDLEAYDDLVNM-------QIVNGAEGMIVGGTTG--------EGQLM-------SW-DEHIMLIG----HTVNCF--- 124 (359)
Q Consensus 75 ~ID~~~l~~li~~-------li~~Gv~Gl~v~GstG--------E~~~L-------T~-~Er~~li~----~~v~~~--- 124 (359)
.+..+.++++++. .+++|.|||=+.|..| -.... |. +-|.+++. .+++.+
T Consensus 159 ~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~ 238 (419)
T 3l5a_A 159 AMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKE 238 (419)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhh
Confidence 3566666666554 4579999999988754 11111 22 66665444 444444
Q ss_pred -CCCcEEEEecC---------CCCHHHHHHHHHHHHh-CCCCEEEEcCCCC----CC--C----CHHHHHHHHHHHHh-c
Q 018253 125 -GASVKVIGNTG---------SNSTREAIHATEQGFA-VGMHAALHINPYY----GK--T----SLEGLISHFDSVLS-M 182 (359)
Q Consensus 125 -~grvpViagvg---------~~st~~ai~la~~a~~-~Gadav~v~pP~y----~~--~----s~~~l~~yf~~Ia~-a 182 (359)
+.+.||.+=++ +.+.++++++++..++ +|+|.+-+....+ +. + ....+.+.+++... .
T Consensus 239 ~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~ 318 (419)
T 3l5a_A 239 APDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGR 318 (419)
T ss_dssp CCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTS
T ss_pred cCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCC
Confidence 34567766443 3468999999999999 9999999887643 11 1 11234444444443 3
Q ss_pred CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEE
Q 018253 183 GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAG 214 (359)
Q Consensus 183 ~PiiiYn~P~~tg~~ls~e~l~~La~~pnivG 214 (359)
+||+. .|--.+++..+++.+.-..|+
T Consensus 319 iPVI~------~GgI~t~e~Ae~~L~~aDlVa 344 (419)
T 3l5a_A 319 IPLIA------SGGINSPESALDALQHADMVG 344 (419)
T ss_dssp SCEEE------CSSCCSHHHHHHHGGGCSEEE
T ss_pred CeEEE------ECCCCCHHHHHHHHHhCCcHH
Confidence 67664 243356777777653233333
No 214
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=85.94 E-value=3.5 Score=39.29 Aligned_cols=101 Identities=10% Similarity=0.044 Sum_probs=65.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC---CHHH-------HHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN---STRE-------AIHAT 146 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~---st~~-------ai~la 146 (359)
+...+++++...+..|++||++-...|-- +......++-+|++.... ++.. ..--.
T Consensus 51 ~l~~~K~lv~~~~~~~asaILlD~~~G~~--------------a~~~~~~~~GLii~~E~~G~~~~~~gr~p~~l~~~sv 116 (332)
T 3iv3_A 51 QMEELKVLVSEELTPYASSILLDPEYGLP--------------AAQARDREAGLLLAYEKTGYDANTTSRLPDCLVDWSI 116 (332)
T ss_dssp HHHHHHHHHHHHHGGGSSEEEECTTTCHH--------------HHHTSCTTCEEEEECBCCCCCTTSSCCCCCBCTTCCH
T ss_pred HHHHHHHHHHHHHhcCCcEEEEchhhCHH--------------HhccccCCCcEEEEeccCCCCcCCCCCCCccccccCH
Confidence 35567889999999999999998776652 113334567888887321 1111 11227
Q ss_pred HHHHhCCCCEEEEcCCCCCCCCHH----HHHHHHHHHHhc-----CCeEE--EeCCC
Q 018253 147 EQGFAVGMHAALHINPYYGKTSLE----GLISHFDSVLSM-----GPTII--YNVPS 192 (359)
Q Consensus 147 ~~a~~~Gadav~v~pP~y~~~s~~----~l~~yf~~Ia~a-----~Piii--Yn~P~ 192 (359)
++|.++|||+|-+.-. |...+++ +..+++.+|.++ +|+++ +-.|.
T Consensus 117 e~a~~~GADAVk~lv~-~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~ 172 (332)
T 3iv3_A 117 KRLKEAGADAVKFLLY-YDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDE 172 (332)
T ss_dssp HHHHHTTCSEEEEEEE-ECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBT
T ss_pred HHHHHcCCCEEEEEEE-cCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCC
Confidence 8889999999987743 3332222 567888888764 69887 44443
No 215
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=85.87 E-value=3.4 Score=36.92 Aligned_cols=76 Identities=8% Similarity=0.013 Sum_probs=50.0
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
..++++.+.+.|++.|.+...++-+. ......++++.+.+.+ .+||+++-+-.+.++ ++.+.+.|||++++.
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~--~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~----~~~~~~~Gad~V~lg 103 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASVE--KRKTMLELVEKVAEQI--DIPFTVGGGIHDFET----ASELILRGADKVSIN 103 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSSS--HHHHHHHHHHHHHTTC--CSCEEEESSCCSHHH----HHHHHHTTCSEEEES
T ss_pred HHHHHHHHHHcCCCEEEEECCchhhc--CCcccHHHHHHHHHhC--CCCEEEeCCCCCHHH----HHHHHHcCCCEEEEC
Confidence 34556777899999998887665443 2223345555555433 689999766555544 555566899999886
Q ss_pred CCCC
Q 018253 161 NPYY 164 (359)
Q Consensus 161 pP~y 164 (359)
...+
T Consensus 104 ~~~l 107 (253)
T 1thf_D 104 TAAV 107 (253)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 5444
No 216
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=85.87 E-value=21 Score=32.79 Aligned_cols=158 Identities=13% Similarity=-0.002 Sum_probs=89.3
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
..+...+.+.|+++|-++--.+=|. =+.+ -++.+.+.+ .+||+..=.-.+.. +...|.++|||+|++..
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~-Gs~~----~L~~ir~~v--~lPVl~Kdfi~d~~----qi~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQ-GAPE----FLTAARQAC--SLPALRKDFLFDPY----QVYEARSWGADCILIIM 150 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTC-CCHH----HHHHHHHTS--SSCEEEESCCCSTH----HHHHHHHTTCSEEEEET
T ss_pred HHHHHHHHHCCCCEEEEeccccccC-CCHH----HHHHHHHhc--CCCEEECCccCCHH----HHHHHHHcCCCEEEEcc
Confidence 3455566789999998764222221 1333 233444444 58998765444444 35567789999999997
Q ss_pred CCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc-CCCeEEEeccCc-----hh----hHhhhhCC
Q 018253 162 PYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAGVKECVG-----ND----RVEHYTGN 230 (359)
Q Consensus 162 P~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~-~pnivGiK~ss~-----d~----~l~~~~~~ 230 (359)
-.. +.+++.++++...+- +-+++ .. =+.+.+.+..+ -+.++|+=.... |. ++.....+
T Consensus 151 a~L---~~~~l~~l~~~a~~lGl~~lv-ev-------h~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~ 219 (272)
T 3tsm_A 151 ASV---DDDLAKELEDTAFALGMDALI-EV-------HDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPS 219 (272)
T ss_dssp TTS---CHHHHHHHHHHHHHTTCEEEE-EE-------CSHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCT
T ss_pred ccc---CHHHHHHHHHHHHHcCCeEEE-Ee-------CCHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCC
Confidence 754 566766666655443 32222 11 13455665544 578999874321 11 33333444
Q ss_pred ceEEEecCCc---hhhhhhhhcCCceeecccccc
Q 018253 231 GIVVWSGNDD---QCHDARWNHGATGVISVTSNL 261 (359)
Q Consensus 231 ~~~v~~G~d~---~~~~~~l~~Ga~G~is~~an~ 261 (359)
+..+++...- .-+.....+|++|++-|.+-+
T Consensus 220 ~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~alm 253 (272)
T 3tsm_A 220 DRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLM 253 (272)
T ss_dssp TSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHc
Confidence 5555553221 112233578999999887654
No 217
>2qyg_A Ribulose bisphosphate carboxylase-like protein 2; beta-alpha-barrel, unknown function; 3.30A {Rhodopseudomonas palustris}
Probab=85.86 E-value=5.1 Score=39.77 Aligned_cols=92 Identities=13% Similarity=0.093 Sum_probs=68.3
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CccCcCCCCHHHHHHHHHHHHH----hhCCCcEEEEecCCCCHHH
Q 018253 67 KTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNSTRE 141 (359)
Q Consensus 67 ~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~~LT~~Er~~li~~~v~----~~~grvpViagvg~~st~~ 141 (359)
-|-+++.--+.-+.+.+.+-.+...|+|=+ =.- .-+....+.++||...+-.+++ .++.+.-..++++ .+.+|
T Consensus 188 gtiiKPklGLs~~~~a~~~ye~~~GGlDfi-KDDE~l~~qpf~p~~eR~~~v~eai~ra~~eTGe~k~y~~NiT-~~~~e 265 (452)
T 2qyg_A 188 FGVIKPNIGLPPQPFAELGYQSWTGGLDIA-KDDEMLADVDWCPLAERAALLGDACRRASAETGVPKIYLANIT-DEVDR 265 (452)
T ss_dssp EEECSSCTTCCSHHHHHHHHHHHHHTCSEE-ECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHSSCCEEEEECC-CCTTH
T ss_pred eeecCCcCCCCHHHHHHHHHHHHhCCCCcc-cCCccCCCCCCCcHHHHHHHHHHHHHHHHHHhCCcceecCcCC-CCHHH
Confidence 344455545888999999999999999943 222 3456667899999875544444 3444444567998 59999
Q ss_pred HHHHHHHHHhCCCCEEEEc
Q 018253 142 AIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~ 160 (359)
.+++++.|+++|+.++|+-
T Consensus 266 M~~Ra~~a~e~G~~~vmvd 284 (452)
T 2qyg_A 266 LTELHDVAVANGAGALLIN 284 (452)
T ss_dssp HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEe
Confidence 9999999999999999885
No 218
>1ykw_A Rubisco-like protein; beta-alpha-barrel, unknown function; 2.00A {Chlorobaculum tepidum} SCOP: c.1.14.1 d.58.9.1 PDB: 1tel_A
Probab=85.81 E-value=5.8 Score=39.19 Aligned_cols=93 Identities=11% Similarity=0.095 Sum_probs=69.6
Q ss_pred eecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CccCcCCCCHHHHHHHHHHHHH----hhCCCcEEEEecCCCCHH
Q 018253 66 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQLMSWDEHIMLIGHTVN----CFGASVKVIGNTGSNSTR 140 (359)
Q Consensus 66 l~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~~LT~~Er~~li~~~v~----~~~grvpViagvg~~st~ 140 (359)
+-|-+++.--+.-+.+.+.+-.+...|+|=+ =.- .-+....+.++||...+-.+++ .++.+.-..++++ .+.+
T Consensus 167 ~gtiiKPklGLs~~~~a~~~ye~~~GGlDfi-KDDE~~~~qpf~p~~eR~~~v~eai~~a~~eTGe~k~~~~NiT-~~~~ 244 (435)
T 1ykw_A 167 FFGVVKPNIGLSPGEFAEIAYQSWLGGLDIA-KDDEMLADVTWSSIEERAAHLGKARRKAEAETGEPKIYLANIT-DEVD 244 (435)
T ss_dssp EEEECSSCSSCCHHHHHHHHHHHHHTTCSEE-ECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECC-CCGG
T ss_pred EeeeccCcCCCCHHHHHHHHHHHHhcCCCcc-cCccccCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceeecccC-CCHH
Confidence 3444455555899999999999999999933 222 3456678899999875544444 3444444567998 4999
Q ss_pred HHHHHHHHHHhCCCCEEEEc
Q 018253 141 EAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 141 ~ai~la~~a~~~Gadav~v~ 160 (359)
|.+++++.|+++|+.++|+-
T Consensus 245 em~~Ra~~a~e~G~~~~mvd 264 (435)
T 1ykw_A 245 SLMEKHDVAVRNGANALLIN 264 (435)
T ss_dssp GHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 99999999999999999985
No 219
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=85.79 E-value=2.7 Score=40.59 Aligned_cols=98 Identities=10% Similarity=-0.013 Sum_probs=78.1
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC--CcEEEEecCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA--SVKVIGNTGS 136 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g--rvpViagvg~ 136 (359)
-.|.-+..-.| ..++.|.+-+.++++.+++.|++-|.++-|.|= +++.+-.++++.+.+.+++ ++|+=++. +
T Consensus 139 ~~g~~v~~~~e--d~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~~~~~~l~~H~-H 212 (370)
T 3rmj_A 139 EYTDDVEFSCE--DALRSEIDFLAEICGAVIEAGATTINIPDTVGY---SIPYKTEEFFRELIAKTPNGGKVVWSAHC-H 212 (370)
T ss_dssp TTCSCEEEEEE--TGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSC---CCHHHHHHHHHHHHHHSTTGGGSEEEEEC-B
T ss_pred HcCCEEEEecC--CCCccCHHHHHHHHHHHHHcCCCEEEecCccCC---cCHHHHHHHHHHHHHhCCCcCceEEEEEe-C
Confidence 34543333333 257899999999999999999999999999984 7899999999999998865 36666554 5
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 137 NSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 137 ~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
++..-++.-+-.|.++||+.+=..--
T Consensus 213 nd~GlAvAN~laAv~aGa~~vd~tv~ 238 (370)
T 3rmj_A 213 NDLGLAVANSLAALKGGARQVECTVN 238 (370)
T ss_dssp CTTSCHHHHHHHHHHTTCCEEEEBGG
T ss_pred CCCChHHHHHHHHHHhCCCEEEEecc
Confidence 77888999999999999999876643
No 220
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=85.69 E-value=5.2 Score=37.07 Aligned_cols=101 Identities=12% Similarity=0.015 Sum_probs=68.4
Q ss_pred CCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC---------CCCCCCHHHHHHHHHHHHhcC--CeEEEeCCCCC
Q 018253 126 ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP---------YYGKTSLEGLISHFDSVLSMG--PTIIYNVPSRT 194 (359)
Q Consensus 126 grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP---------~y~~~s~~~l~~yf~~Ia~a~--PiiiYn~P~~t 194 (359)
++.-++.++.+. -.|+.++++|+|++++..- .-...+-++++.|-+.|++.. +.++=|.|. -
T Consensus 28 g~~i~m~tayDa------~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pf-g 100 (275)
T 3vav_A 28 GEKIAMLTCYDA------SFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPF-G 100 (275)
T ss_dssp TCCEEEEECCSH------HHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCT-T
T ss_pred CCcEEEEeCcCH------HHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCC-C
Confidence 443455566653 2466778899999977642 233467899999999999874 568899994 2
Q ss_pred CCCCCHHHH----HHHhcCCCeEEEeccCch---hhHhhhhCCceEEE
Q 018253 195 GQDIPPRVI----HTMAQSPNLAGVKECVGN---DRVEHYTGNGIVVW 235 (359)
Q Consensus 195 g~~ls~e~l----~~La~~pnivGiK~ss~d---~~l~~~~~~~~~v~ 235 (359)
++ -+++.. .+|.+. .+.|+|.+.+. +.++++...++.++
T Consensus 101 sY-~s~~~a~~~a~rl~ka-Ga~aVklEdg~~~~~~i~~l~~~GIpv~ 146 (275)
T 3vav_A 101 TY-GTPADAFASAVKLMRA-GAQMVKFEGGEWLAETVRFLVERAVPVC 146 (275)
T ss_dssp SC-SSHHHHHHHHHHHHHT-TCSEEEEECCGGGHHHHHHHHHTTCCEE
T ss_pred CC-CCHHHHHHHHHHHHHc-CCCEEEECCchhHHHHHHHHHHCCCCEE
Confidence 46 677654 456665 89999988775 24555544445443
No 221
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=85.65 E-value=25 Score=34.07 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=72.7
Q ss_pred CCCCHHHHHHHHHHHHH-CCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC--C-----------------------
Q 018253 74 GRFDLEAYDDLVNMQIV-NGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA--S----------------------- 127 (359)
Q Consensus 74 g~ID~~~l~~li~~li~-~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g--r----------------------- 127 (359)
..++.+.+.+.++++.+ .|+..|.+.| ||-..+..+.-.++++.+.+. .+ +
T Consensus 143 ~~ls~eei~~~i~~i~~~~gi~~V~ltG--GEPll~~d~~L~~il~~l~~~-~~v~~i~i~Tng~~~~p~~it~e~l~~L 219 (416)
T 2a5h_A 143 DSMPMERIDKAIDYIRNTPQVRDVLLSG--GDALLVSDETLEYIIAKLREI-PHVEIVRIGSRTPVVLPQRITPELVNML 219 (416)
T ss_dssp SBCCHHHHHHHHHHHHTCTTCCEEEEEE--SCTTSSCHHHHHHHHHHHHTS-TTCCEEEEECSHHHHCGGGCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCcEEEEEC--CCCCCCCHHHHHHHHHHHHhc-CCccEEEEEecccccccccCCHHHHHHH
Confidence 46889999999999887 6999988888 998888876677777776542 11 0
Q ss_pred ---cEEEEecCCCCH----HHHHHHHHHHHhCCCCEEEEcCCCC--CCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCC
Q 018253 128 ---VKVIGNTGSNST----REAIHATEQGFAVGMHAALHINPYY--GKTSLEGLISHFDSVLSM--GPTIIYNVPSRTG 195 (359)
Q Consensus 128 ---vpViagvg~~st----~~ai~la~~a~~~Gadav~v~pP~y--~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg 195 (359)
..+.+++.++.. +++++.++.+.++|.. +.+..... ...+.+++.+..+.+.+. .|.+++..|...|
T Consensus 220 ~~~~~v~Isl~~~~~~ei~~~v~~ai~~L~~aGi~-v~i~~vll~GvNd~~e~l~~l~~~l~~lgv~~~~i~~~~~~~g 297 (416)
T 2a5h_A 220 KKYHPVWLNTHFNHPNEITEESTRACQLLADAGVP-LGNQSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLG 297 (416)
T ss_dssp GGGCSEEEEECCCSGGGCCHHHHHHHHHHHHTTCC-EEEEEECCTTTTCSHHHHHHHHHHHHHTTEEEEEEECCCCBTT
T ss_pred HhcCcEEEEEecCCHHHHhHHHHHHHHHHHHcCCE-EEEEEEEECCCCCCHHHHHHHHHHHHHcCCceEEEeecCCCCC
Confidence 123334433222 5677777777777874 22222221 124555666666666554 3555665553333
No 222
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=85.45 E-value=1.6 Score=41.31 Aligned_cols=102 Identities=15% Similarity=0.115 Sum_probs=63.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
+...++.+++.|++++.+.+..- .++++.+.+ . .+||++.+. +++.++.+.+.|+|++.+.
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~p----------~~~i~~l~~-~--g~~v~~~v~------~~~~a~~~~~~GaD~i~v~ 137 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGNP----------SKYMERFHE-A--GIIVIPVVP------SVALAKRMEKIGADAVIAE 137 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCG----------GGTHHHHHH-T--TCEEEEEES------SHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCh----------HHHHHHHHH-c--CCeEEEEeC------CHHHHHHHHHcCCCEEEEE
Confidence 56788888899999999877421 234444443 2 478988773 2455777888999999997
Q ss_pred CCCCCCC-CHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCC-HHHHHHHhc
Q 018253 161 NPYYGKT-SLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIP-PRVIHTMAQ 208 (359)
Q Consensus 161 pP~y~~~-s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls-~e~l~~La~ 208 (359)
.+..... .+..-.+.+.++.+. .||+.= | .|. ++.+.++.+
T Consensus 138 g~~~GG~~g~~~~~~ll~~i~~~~~iPViaa------G-GI~~~~~~~~al~ 182 (332)
T 2z6i_A 138 GMEAGGHIGKLTTMTLVRQVATAISIPVIAA------G-GIADGEGAAAGFM 182 (332)
T ss_dssp CTTSSEECCSSCHHHHHHHHHHHCSSCEEEE------S-SCCSHHHHHHHHH
T ss_pred CCCCCCCCCCccHHHHHHHHHHhcCCCEEEE------C-CCCCHHHHHHHHH
Confidence 5522111 111234566666664 576543 2 344 777777543
No 223
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=85.43 E-value=4.7 Score=40.33 Aligned_cols=76 Identities=18% Similarity=0.265 Sum_probs=47.1
Q ss_pred HHHHHHHCCCCEEEEccCccCcCCCCHHH-------HHHHHHHHHHhhC-CCcEEEEecCCCCHHHHHHHHHHHHhCCCC
Q 018253 84 LVNMQIVNGAEGMIVGGTTGEGQLMSWDE-------HIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~GstGE~~~LT~~E-------r~~li~~~v~~~~-grvpViagvg~~st~~ai~la~~a~~~Gad 155 (359)
.++.++++|+++|.+.+ |.+...+..+ ....+..+++.+. -++|||+.=|=.+..+..+. .++|||
T Consensus 283 ~a~~l~~aGaD~I~vg~--g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~ka----l~~GAd 356 (490)
T 4avf_A 283 AAKALAEAGADAVKVGI--GPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKA----MVAGAY 356 (490)
T ss_dssp HHHHHHHTTCSEEEECS--SCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHH----HHHTCS
T ss_pred HHHHHHHcCCCEEEECC--CCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHH----HHcCCC
Confidence 35678899999999843 3333333322 2344555555553 36999994443345555544 347999
Q ss_pred EEEEcCCCCC
Q 018253 156 AALHINPYYG 165 (359)
Q Consensus 156 av~v~pP~y~ 165 (359)
+|++-..+..
T Consensus 357 ~V~vGs~~~~ 366 (490)
T 4avf_A 357 CVMMGSMFAG 366 (490)
T ss_dssp EEEECTTTTT
T ss_pred eeeecHHHhc
Confidence 9999976643
No 224
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=85.28 E-value=20 Score=35.63 Aligned_cols=104 Identities=10% Similarity=0.009 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec---CCCCHHHHHHHHHHHHhCCC
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT---GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv---g~~st~~ai~la~~a~~~Ga 154 (359)
.+..+..++..+++|++.+-++.++.+. +.-...++.+.+ .+.++-+-++. .-.+.+..++.++.+.++||
T Consensus 99 ddv~~~~v~~a~~~Gvd~i~if~~~sd~-----~ni~~~i~~ak~-~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Ga 172 (464)
T 2nx9_A 99 DDVVDTFVERAVKNGMDVFRVFDAMNDV-----RNMQQALQAVKK-MGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGV 172 (464)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTCCT-----HHHHHHHHHHHH-TTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTC
T ss_pred chhhHHHHHHHHhCCcCEEEEEEecCHH-----HHHHHHHHHHHH-CCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCC
Confidence 4557888999999999999999999887 222334444333 22222222222 12368999999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEE
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIY 188 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiY 188 (359)
|.+.+.- .....++.++.+.++.+.+. .||-++
T Consensus 173 d~I~l~D-T~G~~~P~~v~~lv~~l~~~~~~~i~~H 207 (464)
T 2nx9_A 173 DSIALKD-MAGILTPYAAEELVSTLKKQVDVELHLH 207 (464)
T ss_dssp SEEEEEE-TTSCCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CEEEEcC-CCCCcCHHHHHHHHHHHHHhcCCeEEEE
Confidence 9776643 34456788888888888776 576555
No 225
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=85.23 E-value=4.9 Score=36.29 Aligned_cols=69 Identities=12% Similarity=0.220 Sum_probs=49.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC-CCHHHHHHHHHH
Q 018253 70 YLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATEQ 148 (359)
Q Consensus 70 F~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~-~st~~ai~la~~ 148 (359)
.++|-+...+. ++.+.++|+|.|.+++|.| .|.+.-.++++.+.+ .++|++.=.+. +..
T Consensus 15 gDP~~~~t~~~----~~~l~~~GaD~IelG~S~g----~t~~~~~~~v~~ir~---~~~Pivl~~y~~n~i--------- 74 (234)
T 2f6u_A 15 LDPDRTNTDEI----IKAVADSGTDAVMISGTQN----VTYEKARTLIEKVSQ---YGLPIVVEPSDPSNV--------- 74 (234)
T ss_dssp ECTTSCCCHHH----HHHHHTTTCSEEEECCCTT----CCHHHHHHHHHHHTT---SCCCEEECCSSCCCC---------
T ss_pred eCCCccccHHH----HHHHHHcCCCEEEECCCCC----CCHHHHHHHHHHhcC---CCCCEEEecCCcchh---------
Confidence 34554444444 5677889999999999755 477777777777765 37999887766 333
Q ss_pred HHhCCCCEEEEc
Q 018253 149 GFAVGMHAALHI 160 (359)
Q Consensus 149 a~~~Gadav~v~ 160 (359)
+.|+|++++.
T Consensus 75 --~~gvDg~iip 84 (234)
T 2f6u_A 75 --VYDVDYLFVP 84 (234)
T ss_dssp --CCCSSEEEEE
T ss_pred --hcCCCEEEEc
Confidence 7799998874
No 226
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=85.20 E-value=4.9 Score=37.99 Aligned_cols=88 Identities=6% Similarity=-0.122 Sum_probs=58.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccCcC--CCCHHHHHHHHHHHHHhhCCCcEEEEecCCC-CHHHHHHHHHHHH
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQ--LMSWDEHIMLIGHTVNCFGASVKVIGNTGSN-STREAIHATEQGF 150 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~--~LT~~Er~~li~~~v~~~~grvpViagvg~~-st~~ai~la~~a~ 150 (359)
+..+.+....+++.+.+.|++.|-+.+.+-+.. .........+++.+.+.+ ++|||++ |.. +.+++.+ +.
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~-Ggi~s~~~a~~----~l 296 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAV-GMITDGSMAEE----IL 296 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEEC-SSCCSHHHHHH----HH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEE-CCCCCHHHHHH----HH
Confidence 457888999999999999999999876543211 111112345666666666 5798864 444 5555444 44
Q ss_pred hCC-CCEEEEcCCCCCCCC
Q 018253 151 AVG-MHAALHINPYYGKTS 168 (359)
Q Consensus 151 ~~G-adav~v~pP~y~~~s 168 (359)
+.| ||.|++.-++...|.
T Consensus 297 ~~G~aD~V~iGR~~i~nPd 315 (338)
T 1z41_A 297 QNGRADLIFIGRELLRDPF 315 (338)
T ss_dssp HTTSCSEEEECHHHHHCTT
T ss_pred HcCCceEEeecHHHHhCch
Confidence 567 999999988776553
No 227
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=85.09 E-value=1.8 Score=40.99 Aligned_cols=60 Identities=22% Similarity=0.230 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHH
Q 018253 142 AIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIH 204 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~ 204 (359)
..+.+++|++.|.. +.+.+|+-.+.+.+.+.+..+++.+..+-. -+++...|.. +|+.+.
T Consensus 124 ~~~~v~~a~~~g~~-v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~-i~l~DT~G~~-~P~~v~ 183 (325)
T 3eeg_A 124 AVAAVKQAKKVVHE-VEFFCEDAGRADQAFLARMVEAVIEAGADV-VNIPDTTGYM-LPWQYG 183 (325)
T ss_dssp THHHHHHHHTTSSE-EEEEEETGGGSCHHHHHHHHHHHHHHTCSE-EECCBSSSCC-CHHHHH
T ss_pred HHHHHHHHHHCCCE-EEEEccccccchHHHHHHHHHHHHhcCCCE-EEecCccCCc-CHHHHH
Confidence 44566677777864 556667767778888888888877764322 3345566764 444333
No 228
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=85.05 E-value=4.2 Score=40.77 Aligned_cols=76 Identities=18% Similarity=0.211 Sum_probs=46.5
Q ss_pred HHHHHHHCCCCEEEEccCccCcCCCCHHH-------HHHHHHHHHHhhC-CCcEEEEecCCCCHHHHHHHHHHHHhCCCC
Q 018253 84 LVNMQIVNGAEGMIVGGTTGEGQLMSWDE-------HIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~GstGE~~~LT~~E-------r~~li~~~v~~~~-grvpViagvg~~st~~ai~la~~a~~~Gad 155 (359)
.++.++++|+++|.+.++.| ...+..+ ....+..+++.+. -++|||+.=|-.+..++.+. .++|||
T Consensus 285 ~a~~l~~aGaD~I~Vg~g~G--s~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~ka----la~GAd 358 (496)
T 4fxs_A 285 GARALIEAGVSAVKVGIGPG--SICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKA----IAAGAS 358 (496)
T ss_dssp HHHHHHHHTCSEEEECSSCC--TTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHH----HHTTCS
T ss_pred HHHHHHHhCCCEEEECCCCC--cCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHH----HHcCCC
Confidence 35667789999999875333 2223322 2234444444442 25999994443455555543 457999
Q ss_pred EEEEcCCCCC
Q 018253 156 AALHINPYYG 165 (359)
Q Consensus 156 av~v~pP~y~ 165 (359)
+||+-..+..
T Consensus 359 ~V~iGs~f~~ 368 (496)
T 4fxs_A 359 CVMVGSMFAG 368 (496)
T ss_dssp EEEESTTTTT
T ss_pred eEEecHHHhc
Confidence 9999977654
No 229
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=85.03 E-value=2 Score=38.54 Aligned_cols=98 Identities=12% Similarity=0.044 Sum_probs=54.8
Q ss_pred EeeecCCCCCCCCCH--HHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-ecCCCCHH
Q 018253 64 TAIKTPYLPDGRFDL--EAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-NTGSNSTR 140 (359)
Q Consensus 64 ~al~TPF~~dg~ID~--~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-gvg~~st~ 140 (359)
..++|+++..+..+. +...++++.-.+.|++|+++.++ ..+| ++.+.+..+.+.+++. |++...-
T Consensus 120 v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at-------~~~e----~~~ir~~~~~~~~iv~PGI~~~g~- 187 (228)
T 3m47_A 120 VFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPST-------RPER----LSRLREIIGQDSFLISPGVGAQGG- 187 (228)
T ss_dssp EEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSS-------CHHH----HHHHHHHHCSSSEEEECC-------
T ss_pred eEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECCC-------ChHH----HHHHHHhcCCCCEEEecCcCcCCC-
Confidence 456788877654432 33455566666799999775442 1222 2233445555566554 7765321
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHH
Q 018253 141 EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDS 178 (359)
Q Consensus 141 ~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~ 178 (359)
+ . .+.++|+|.+++-.|.|...++.+..+-+++
T Consensus 188 -~---p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~~ 220 (228)
T 3m47_A 188 -D---P-GETLRFADAIIVGRSIYLADNPAAAAAGAIE 220 (228)
T ss_dssp --------CGGGTCSEEEECHHHHTSSCHHHHHHHHHH
T ss_pred -C---H-hHHHcCCCEEEECHHHhCCCCHHHHHHHHHH
Confidence 1 2 5667999999998888876776554444443
No 230
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=84.97 E-value=2.9 Score=42.54 Aligned_cols=87 Identities=15% Similarity=0.208 Sum_probs=61.9
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
..++.+.+.|++.|++.+-+-++..--. -.++++.+.+.+ ++|||+.=+-.+.++..++.+. .|+|++++..-
T Consensus 456 e~a~~~~~~Ga~~il~t~~~~dG~~~G~--d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~---~G~~gvivg~a 528 (555)
T 1jvn_A 456 ELTRACEALGAGEILLNCIDKDGSNSGY--DLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLK---TRADACLGAGM 528 (555)
T ss_dssp HHHHHHHHTTCCEEEECCGGGTTTCSCC--CHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHH---SCCSEEEESHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCCCCC--CHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHh---cCChHHHHHHH
Confidence 4667778999999999886655543222 145566666654 6899997666678877766553 69999999987
Q ss_pred CCCC-CCHHHHHHHH
Q 018253 163 YYGK-TSLEGLISHF 176 (359)
Q Consensus 163 ~y~~-~s~~~l~~yf 176 (359)
+|.. .+-+++.+|.
T Consensus 529 ~~~~~~~~~e~~~~l 543 (555)
T 1jvn_A 529 FHRGEFTVNDVKEYL 543 (555)
T ss_dssp HHTTSCCHHHHHHHH
T ss_pred HHcCCCCHHHHHHHH
Confidence 6654 4778877764
No 231
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=84.94 E-value=15 Score=34.82 Aligned_cols=145 Identities=11% Similarity=0.057 Sum_probs=99.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
.|.+.+.+.+....+.|.+++=+-...+ +.++-.+.++.+++.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~-----~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 219 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMKVGRP-----DLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDL 219 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCS-----SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCC-----CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 4788899999999999999887754332 45666788888889888889998865 45689999999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCeEEEeccC--chh---hHh
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV--GND---RVE 225 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La--~~pnivGiK~ss--~d~---~l~ 225 (359)
+.+ --|+- ..+ .+.+++|.+. .||+.=. .-.+++.+.++. ..-+++-+|-+- +-. ++.
T Consensus 220 ~~i--EqP~~-~~d----~~~~~~l~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~ 286 (371)
T 2ovl_A 220 HWI--EEPTI-PDD----LVGNARIVRESGHTIAGGE------NLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVA 286 (371)
T ss_dssp SEE--ECCSC-TTC----HHHHHHHHHHHCSCEEECT------TCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHH
T ss_pred CEE--ECCCC-ccc----HHHHHHHHhhCCCCEEeCC------CCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHH
Confidence 854 44541 112 4455666654 6776543 235688888886 357888899754 222 333
Q ss_pred hhh-CCceEEEecC
Q 018253 226 HYT-GNGIVVWSGN 238 (359)
Q Consensus 226 ~~~-~~~~~v~~G~ 238 (359)
++. .-++.++.|.
T Consensus 287 ~~A~~~gi~~~~h~ 300 (371)
T 2ovl_A 287 ALAEANNMLLTSHG 300 (371)
T ss_dssp HHHHHTTCCEEECS
T ss_pred HHHHHcCCeEcccc
Confidence 322 2345566654
No 232
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=84.89 E-value=25 Score=32.80 Aligned_cols=124 Identities=13% Similarity=0.132 Sum_probs=75.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEc-cC---ccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe------cCCCCHHHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVG-GT---TGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN------TGSNSTREAIHA 145 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~-Gs---tGE~~~LT~~Er~~li~~~v~~~~grvpViag------vg~~st~~ai~l 145 (359)
-+.+.++..+..+.+.||+.|+++ |- .|+.....-. +|++.+.+. + ..-|-+. ..+.+.+.-++.
T Consensus 94 ~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~---dLv~~ir~~-~-~f~IgvA~yPE~Hp~a~~~~~d~~~ 168 (304)
T 3fst_A 94 ATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYAS---DLVTLLKEV-A-DFDISVAAYPEVHPEAKSAQADLLN 168 (304)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHH---HHHHHHHHH-C-CCEEEEEECTTCCTTCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHH---HHHHHHHHc-C-CCeEEEEeCCCcCCCCCCHHHHHHH
Confidence 688999999999999999999987 32 1223334444 444444333 2 2222111 123466666666
Q ss_pred HHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCCC-----------CCCCCCCHHHHHHHhc
Q 018253 146 TEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVPS-----------RTGQDIPPRVIHTMAQ 208 (359)
Q Consensus 146 a~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a---~PiiiYn~P~-----------~tg~~ls~e~l~~La~ 208 (359)
.+.=.++|||.++ +-++| +.+.+.+|.+.+.+. .||+.==.|- .+|+.++.+++++|.+
T Consensus 169 Lk~KvdAGAdf~i-TQ~ff---D~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~~~Gv~iP~~l~~~l~~ 241 (304)
T 3fst_A 169 LKRKVDAGANRAI-TQFFF---DVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLADMTNVRIPAWMAQMFDG 241 (304)
T ss_dssp HHHHHHHTCCEEE-ECCCS---CHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHHHHHHTCCCCHHHHHHHTT
T ss_pred HHHHHHcCCCEEE-eCccC---CHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHHHHcCCCcCCHHHHHHHHh
Confidence 6666789999754 44666 678888888888765 5776444442 2366666666666653
No 233
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=84.85 E-value=4.4 Score=39.89 Aligned_cols=95 Identities=9% Similarity=-0.009 Sum_probs=36.2
Q ss_pred HHHHHCCCCEEEEccCccCcC-----CCCHHHHHHHHHHHHHhhC-CCcEEEEec---CCCCHHHHHHHHHHHHhCCCCE
Q 018253 86 NMQIVNGAEGMIVGGTTGEGQ-----LMSWDEHIMLIGHTVNCFG-ASVKVIGNT---GSNSTREAIHATEQGFAVGMHA 156 (359)
Q Consensus 86 ~~li~~Gv~Gl~v~GstGE~~-----~LT~~Er~~li~~~v~~~~-grvpViagv---g~~st~~ai~la~~a~~~Gada 156 (359)
+..+++|++.+-+..+++|.+ ..|.+|-.+.+..+++.+. ....|.++. ...+.+..++.++.+.++|+|.
T Consensus 117 ~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~ 196 (423)
T 3ivs_A 117 RVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNR 196 (423)
T ss_dssp HHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSE
T ss_pred HHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCc
Confidence 344445555555555555543 2333333333333333221 122333322 1223444555555555555554
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHHHh
Q 018253 157 ALHINPYYGKTSLEGLISHFDSVLS 181 (359)
Q Consensus 157 v~v~pP~y~~~s~~~l~~yf~~Ia~ 181 (359)
+.+. =.....++.++.+.++.+.+
T Consensus 197 i~l~-DTvG~~~P~~v~~lv~~l~~ 220 (423)
T 3ivs_A 197 VGIA-DTVGCATPRQVYDLIRTLRG 220 (423)
T ss_dssp EEEE-ETTSCCCHHHHHHHHHHHHH
T ss_pred cccC-CccCcCCHHHHHHHHHHHHh
Confidence 3332 12223344445555554444
No 234
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=84.85 E-value=20 Score=31.56 Aligned_cols=124 Identities=10% Similarity=-0.035 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-ec-CCCCHHHHHHHHHHHHhCCCCEE
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-NT-GSNSTREAIHATEQGFAVGMHAA 157 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-gv-g~~st~~ai~la~~a~~~Gadav 157 (359)
.+...++.+.+.|.+||=+.+..- ...++.++..++.+...+ .+ +.+.. +. ...+.+...+.++.|+++|+..+
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~~~~~~l~~-~g--l~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v 106 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHL-PLNSTDEQIRAFHDKCAA-HK--VTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLI 106 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTS-CTTCCHHHHHHHHHHHHH-TT--CEEEEEEEEEECSHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHhCCCEEEEecccC-CCCCCHHHHHHHHHHHHH-cC--CeEEEEeccccCCHHHHHHHHHHHHHhCCCEE
Confidence 466778888899999998876521 234677776666655444 32 44332 22 12577888889999999999998
Q ss_pred EEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC-CCCCCCCCCHHHHHHHhc--CCCeEEE
Q 018253 158 LHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV-PSRTGQDIPPRVIHTMAQ--SPNLAGV 215 (359)
Q Consensus 158 ~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~-P~~tg~~ls~e~l~~La~--~pnivGi 215 (359)
.+.|. . +..+...++++. +.+.+.|. |..+ .--+++.+.+|.+ .|++.-.
T Consensus 107 ~~~p~------~-~~l~~l~~~a~~~gv~l~lEn~~~~~~-~~~~~~~~~~ll~~~~p~vg~~ 161 (257)
T 3lmz_A 107 VGVPN------Y-ELLPYVDKKVKEYDFHYAIHLHGPDIK-TYPDATDVWVHTKDLDPRIGMC 161 (257)
T ss_dssp EEEEC------G-GGHHHHHHHHHHHTCEEEEECCCTTCS-SSCSHHHHHHHHTTSCTTEEEE
T ss_pred EecCC------H-HHHHHHHHHHHHcCCEEEEecCCCccc-ccCCHHHHHHHHHhCCCCccEE
Confidence 87543 1 222333333433 57778887 4322 2236777777763 5765433
No 235
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=84.76 E-value=4.5 Score=37.02 Aligned_cols=110 Identities=15% Similarity=0.159 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v 159 (359)
++++.++.+.++|++|+++.. |..||..++.+.+.++ .+.+|.=+.-+++. ++++...+.+-+.+-.
T Consensus 104 G~e~F~~~~~~aGvdG~IipD-------LP~eE~~~~~~~~~~~---Gl~~I~lvaP~t~~---eRi~~ia~~a~gFiY~ 170 (252)
T 3tha_A 104 GLEKFVKKAKSLGICALIVPE-------LSFEESDDLIKECERY---NIALITLVSVTTPK---ERVKKLVKHAKGFIYL 170 (252)
T ss_dssp CHHHHHHHHHHTTEEEEECTT-------CCGGGCHHHHHHHHHT---TCEECEEEETTSCH---HHHHHHHTTCCSCEEE
T ss_pred hHHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHHHHHc---CCeEEEEeCCCCcH---HHHHHHHHhCCCeEEE
Confidence 467777788888888888765 6666766666655443 12222222222222 3333333333222322
Q ss_pred cC--CCCCCCC--HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-CHHHHHHHhcC
Q 018253 160 IN--PYYGKTS--LEGLISHFDSVLSM--GPTIIYNVPSRTGQDI-PPRVIHTMAQS 209 (359)
Q Consensus 160 ~p--P~y~~~s--~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~l-s~e~l~~La~~ 209 (359)
+. ..-...+ .+++.++++.|.+. .|+++ |..+ +++.++++++.
T Consensus 171 Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v-------GfGIst~e~a~~~~~~ 220 (252)
T 3tha_A 171 LASIGITGTKSVEEAILQDKVKEIRSFTNLPIFV-------GFGIQNNQDVKRMRKV 220 (252)
T ss_dssp ECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE-------ESSCCSHHHHHHHTTT
T ss_pred EecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEE-------EcCcCCHHHHHHHHhc
Confidence 22 1111111 23456666666654 45544 5566 46777776653
No 236
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=84.70 E-value=14 Score=33.37 Aligned_cols=98 Identities=15% Similarity=0.031 Sum_probs=65.1
Q ss_pred eEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC---CcEEEEecCCCC
Q 018253 62 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA---SVKVIGNTGSNS 138 (359)
Q Consensus 62 i~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g---rvpViagvg~~s 138 (359)
+-...+|-| +.|.-..+....-++.-++.|++.|=+--.-|-... +-.+-+..+++.+.+ -++||.-++-.+
T Consensus 72 v~v~tvigF-P~G~~~~~~k~~e~~~Av~~GAdEID~vinig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~ 146 (234)
T 1n7k_A 72 VKLCSVIGF-PLGQAPLEVKLVEAQTVLEAGATELDVVPHLSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLWD 146 (234)
T ss_dssp CCEEEEEST-TTCCSCHHHHHHHHHHHHHHTCCEEEECCCGGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGSC
T ss_pred ceEEEEeCC-CCCCCcHHHHHHHHHHHHHcCCCEEEEeccchHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCCC
Confidence 334445666 466677788888889999999999877666664433 333333344443322 244588777777
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCC
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYY 164 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y 164 (359)
.++-...+|.+.++|||.|=...-|.
T Consensus 147 ~e~i~~a~ria~eaGADfVKTsTG~~ 172 (234)
T 1n7k_A 147 DKTLSLLVDSSRRAGADIVKTSTGVY 172 (234)
T ss_dssp HHHHHHHHHHHHHTTCSEEESCCSSS
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 88888888999999999776654443
No 237
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=84.69 E-value=21 Score=31.70 Aligned_cols=188 Identities=11% Similarity=0.006 Sum_probs=104.1
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS 138 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s 138 (359)
-.++++.+-. .|.+.+...++.+++.|++-+=+--. ..+ -.+.++...+..+ ++.+-+|+ .-
T Consensus 16 ~~~ii~vir~-------~~~~~~~~~~~al~~gGv~~iel~~k-----~~~---~~~~i~~l~~~~~-~l~vgaGt--vl 77 (224)
T 1vhc_A 16 ELKIVPVIAL-------DNADDILPLADTLAKNGLSVAEITFR-----SEA---AADAIRLLRANRP-DFLIAAGT--VL 77 (224)
T ss_dssp HHCEEEEECC-------SSGGGHHHHHHHHHHTTCCEEEEETT-----STT---HHHHHHHHHHHCT-TCEEEEES--CC
T ss_pred HCCeEEEEeC-------CCHHHHHHHHHHHHHcCCCEEEEecc-----Cch---HHHHHHHHHHhCc-CcEEeeCc--Ee
Confidence 4566666544 45566788999999999997665422 122 2345565555554 44455554 22
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhc-CCCeEEEec
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQ-SPNLAGVKE 217 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~La~-~pnivGiK~ 217 (359)
+. +.++.|.++|||++.. |- +..++.+.-++ . -.|+++ | -.+++.+.+..+ -...+++ .
T Consensus 78 ~~---d~~~~A~~aGAd~v~~--p~----~d~~v~~~ar~-~-g~~~i~-------G-v~t~~e~~~A~~~Gad~vk~-F 137 (224)
T 1vhc_A 78 TA---EQVVLAKSSGADFVVT--PG----LNPKIVKLCQD-L-NFPITP-------G-VNNPMAIEIALEMGISAVKF-F 137 (224)
T ss_dssp SH---HHHHHHHHHTCSEEEC--SS----CCHHHHHHHHH-T-TCCEEC-------E-ECSHHHHHHHHHTTCCEEEE-T
T ss_pred eH---HHHHHHHHCCCCEEEE--CC----CCHHHHHHHHH-h-CCCEEe-------c-cCCHHHHHHHHHCCCCEEEE-e
Confidence 22 6778888899999842 32 23455554444 1 135443 3 245655555443 3456666 3
Q ss_pred cC----chhhHhhhhC--CceEE--EecCCchhhhhhhhc-CCceeecccccccHHHHHHHHHcCCcHHHHHHHHHHHHH
Q 018253 218 CV----GNDRVEHYTG--NGIVV--WSGNDDQCHDARWNH-GATGVISVTSNLVPGMMRELMFGGKNPSLNTKLFPLIEW 288 (359)
Q Consensus 218 ss----~d~~l~~~~~--~~~~v--~~G~d~~~~~~~l~~-Ga~G~is~~an~~P~l~~~l~~ag~a~~l~~~l~~l~~~ 288 (359)
.. +-..++.... +++.+ ..|-+..-+...+.. |++|+. .+.+++... .++++..++.++...+.+.
T Consensus 138 pa~~~gG~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v~--gS~i~~~~~---i~~~~~~~i~~~a~~~~~~ 212 (224)
T 1vhc_A 138 PAEASGGVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACG--GSWFVEKKL---IQSNNWDEIGRLVREVIDI 212 (224)
T ss_dssp TTTTTTHHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCEE--ECGGGCHHH---HHTTCHHHHHHHHHHHHHH
T ss_pred eCccccCHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEEE--EchhcCcch---hccCCHHHHHHHHHHHHHH
Confidence 31 1122332221 23444 446655555666777 666665 455555432 2566766676666666664
Q ss_pred H
Q 018253 289 L 289 (359)
Q Consensus 289 l 289 (359)
.
T Consensus 213 ~ 213 (224)
T 1vhc_A 213 I 213 (224)
T ss_dssp H
T ss_pred H
Confidence 4
No 238
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=84.54 E-value=2.4 Score=37.94 Aligned_cols=104 Identities=16% Similarity=0.240 Sum_probs=64.5
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
..++..++.|++++...++. ..+++.+.+ . .++++.|+. +..| ++.|.+.|+|.+.+.|
T Consensus 80 d~~~~A~~aGAd~v~~p~~d-----------~~v~~~ar~-~--g~~~i~Gv~--t~~e----~~~A~~~Gad~vk~Fp- 138 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPGLN-----------PKIVKLCQD-L--NFPITPGVN--NPMA----IEIALEMGISAVKFFP- 138 (224)
T ss_dssp HHHHHHHHHTCSEEECSSCC-----------HHHHHHHHH-T--TCCEECEEC--SHHH----HHHHHHTTCCEEEETT-
T ss_pred HHHHHHHHCCCCEEEECCCC-----------HHHHHHHHH-h--CCCEEeccC--CHHH----HHHHHHCCCCEEEEee-
Confidence 45677788999999755432 345565555 3 357787854 3444 4567789999999943
Q ss_pred CCCCCCHHHHHHHHHHHHhcCC-eEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 163 YYGKTSLEGLISHFDSVLSMGP-TIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 163 ~y~~~s~~~l~~yf~~Ia~a~P-iiiYn~P~~tg~~ls~e~l~~La~~pnivGiK 216 (359)
...-+-.+|++++....| +=+ .| +| .++++.+.++.+.+++.|+=
T Consensus 139 ----a~~~gG~~~lk~l~~~~~~ipv--va--iG-GI~~~N~~~~l~agga~~v~ 184 (224)
T 1vhc_A 139 ----AEASGGVKMIKALLGPYAQLQI--MP--TG-GIGLHNIRDYLAIPNIVACG 184 (224)
T ss_dssp ----TTTTTHHHHHHHHHTTTTTCEE--EE--BS-SCCTTTHHHHHTSTTBCCEE
T ss_pred ----CccccCHHHHHHHHhhCCCCeE--EE--EC-CcCHHHHHHHHhcCCCEEEE
Confidence 111112677888876543 212 12 33 46778888888776655554
No 239
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=84.54 E-value=6.7 Score=37.27 Aligned_cols=101 Identities=8% Similarity=0.043 Sum_probs=63.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Ga 154 (359)
.++.+.+.+.++.+.+.|++.|++.|+++|...+..+.-.++++.+.+. .+.+.+..|.. +++ .++..+++|+
T Consensus 98 ~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~---g~~i~~t~G~l-~~e---~l~~L~~aGv 170 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAM---GLEACMTLGTL-SES---QAQRLANAGL 170 (369)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHT---TSEEEEECSSC-CHH---HHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHc---CCeEEEecCCC-CHH---HHHHHHHCCC
Confidence 3678888888888888899998888877666667778888888877763 24454444443 333 3344456688
Q ss_pred CEEEEcCCC----C---C-CCCHHHHHHHHHHHHhc
Q 018253 155 HAALHINPY----Y---G-KTSLEGLISHFDSVLSM 182 (359)
Q Consensus 155 dav~v~pP~----y---~-~~s~~~l~~yf~~Ia~a 182 (359)
|.+.+-.=. | . ..+.+++.+-++.+.+.
T Consensus 171 d~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~ 206 (369)
T 1r30_A 171 DYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDA 206 (369)
T ss_dssp CEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHH
T ss_pred CEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHc
Confidence 887643211 1 0 13445555555555554
No 240
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=84.41 E-value=0.45 Score=44.89 Aligned_cols=78 Identities=10% Similarity=0.080 Sum_probs=50.8
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
.+++.+.+.|+++|.+-|.+.+.. ++..-..++++. ... ++|||+.=+=.+.+++.+..+ +.|||+||+--+
T Consensus 144 ~~a~~l~~~G~d~i~v~g~~~~~~-~~~~~~~~~i~~---i~~-~ipVi~~GgI~s~~da~~~l~---~~gad~V~iGR~ 215 (318)
T 1vhn_A 144 EIYRILVEEGVDEVFIHTRTVVQS-FTGRAEWKALSV---LEK-RIPTFVSGDIFTPEDAKRALE---ESGCDGLLVARG 215 (318)
T ss_dssp HHHHHHHHTTCCEEEEESSCTTTT-TSSCCCGGGGGG---SCC-SSCEEEESSCCSHHHHHHHHH---HHCCSEEEESGG
T ss_pred HHHHHHHHhCCCEEEEcCCCcccc-CCCCcCHHHHHH---HHc-CCeEEEECCcCCHHHHHHHHH---cCCCCEEEECHH
Confidence 788888899999999987665431 111000122322 223 899997544456666665544 359999999999
Q ss_pred CCCCCC
Q 018253 163 YYGKTS 168 (359)
Q Consensus 163 ~y~~~s 168 (359)
.+..|.
T Consensus 216 ~l~~P~ 221 (318)
T 1vhn_A 216 AIGRPW 221 (318)
T ss_dssp GTTCTT
T ss_pred HHhCcc
Confidence 987765
No 241
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=84.33 E-value=3.9 Score=38.88 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=81.8
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 152 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~ 152 (359)
.+..|.+-+.++++.+.+.|++.|.+.-|.|= +++++-.++++.+.+.++ .+|+=++. +++..-++..+-.|.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~v~~lv~~l~~~~p-~~~i~~H~-Hnd~GlA~AN~laAv~a 237 (337)
T 3ble_A 163 GFRNSPDYVKSLVEHLSKEHIERIFLPDTLGV---LSPEETFQGVDSLIQKYP-DIHFEFHG-HNDYDLSVANSLQAIRA 237 (337)
T ss_dssp HHHHCHHHHHHHHHHHHTSCCSEEEEECTTCC---CCHHHHHHHHHHHHHHCT-TSCEEEEC-BCTTSCHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHHHHcCCCEEEEecCCCC---cCHHHHHHHHHHHHHhcC-CCeEEEEe-cCCcchHHHHHHHHHHh
Confidence 46788999999999999999999999999886 689999999999998874 56766554 56788889999999999
Q ss_pred CCCEEEEcCCCCC----CCCHHHHHHHHHHH
Q 018253 153 GMHAALHINPYYG----KTSLEGLISHFDSV 179 (359)
Q Consensus 153 Gadav~v~pP~y~----~~s~~~l~~yf~~I 179 (359)
||+.+=..---+. ..+-|+++..++..
T Consensus 238 Ga~~vd~tv~GlG~~aGN~~~E~lv~~L~~~ 268 (337)
T 3ble_A 238 GVKGLHASINGLGERAGNTPLEALVTTIHDK 268 (337)
T ss_dssp TCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH
T ss_pred CCCEEEEecccccccccchhHHHHHHHHHHh
Confidence 9999866543332 35567777777654
No 242
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=84.32 E-value=7 Score=37.96 Aligned_cols=24 Identities=25% Similarity=0.194 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEc
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVG 99 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~ 99 (359)
-|.+...+++++..+.|++.+.++
T Consensus 157 ~d~~~~~~~~~ra~~~G~~al~it 180 (392)
T 2nzl_A 157 KDREVTKKLVRQAEKMGYKAIFVT 180 (392)
T ss_dssp SSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEe
Confidence 377888999999888999988873
No 243
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=84.08 E-value=29 Score=33.18 Aligned_cols=144 Identities=8% Similarity=0.016 Sum_probs=98.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCC-HHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMS-WDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT-~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~G 153 (359)
.+.+.+.+.+....+.|.+++=+-+. .+ .++=.++++.+++.++.++++.+-+ ++.+.++++++++..++.|
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g------~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 221 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPM------LDSLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFN 221 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCC------CSSHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccC------CChHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcC
Confidence 47788999999999999998876533 12 4666788888888888889998865 4568999999999999999
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC--chh---hH
Q 018253 154 MHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RV 224 (359)
Q Consensus 154 adav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss--~d~---~l 224 (359)
++.+ --|.- +. -.+.+++|.+. .||+.=. .-.+++.+.++.+ .-+++-+|-+- +-. ++
T Consensus 222 i~~i--EqP~~--~~---d~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 288 (391)
T 2qgy_A 222 PYWI--EEPVD--GE---NISLLTEIKNTFNMKVVTGE------KQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEI 288 (391)
T ss_dssp CSEE--ECSSC--TT---CHHHHHHHHHHCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHH
T ss_pred CCeE--eCCCC--hh---hHHHHHHHHhhCCCCEEEcC------CcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHH
Confidence 9854 34431 11 14556666665 5766532 2356888888873 56888899754 222 33
Q ss_pred hhhh-CCceEEEecC
Q 018253 225 EHYT-GNGIVVWSGN 238 (359)
Q Consensus 225 ~~~~-~~~~~v~~G~ 238 (359)
.++. ..++.++.|.
T Consensus 289 ~~~A~~~gi~~~~~~ 303 (391)
T 2qgy_A 289 SNEASNNGIFISPHC 303 (391)
T ss_dssp HHHHHHTTCEECCBC
T ss_pred HHHHHHCCCEEeccC
Confidence 3332 2355665554
No 244
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=83.99 E-value=2.4 Score=42.12 Aligned_cols=69 Identities=10% Similarity=0.115 Sum_probs=48.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
..+.++++++.|++.+++.++.|. .+.-.+.++.+.+..+ .+||++|-.. + .+.++.+.++|+|++.+.
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~g~-----~~~~~~~i~~l~~~~p-~~pvi~G~v~-t----~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAHGH-----SAGVLRKIAEIRAHFP-NRTLIAGNIA-T----AEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCTT-----CHHHHHHHHHHHHHCS-SSCEEEEEEC-S----HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEeeecCc-----chhHHHHHHHHHHHCC-CCcEeCCCcc-C----HHHHHHHHHcCCCEEEEC
Confidence 356688899999999998875442 2344566667676663 6899876332 2 266778889999999875
No 245
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=83.92 E-value=28 Score=32.60 Aligned_cols=171 Identities=11% Similarity=0.099 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC-------CCHHH-HH-HHHHH
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-------NSTRE-AI-HATEQ 148 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~-------~st~~-ai-~la~~ 148 (359)
++-++++++.+.+.|++|++..- |=. +...|+ -+..+++ ++...+- ...++ .. --.+.
T Consensus 70 ~~~l~~~~~~~~~~Gvdavl~~~--gi~------~d~~Li----~~L~~~t-v~gs~~~ggl~g~~~~~d~~~~~~sVe~ 136 (307)
T 3fok_A 70 YELLERMAIALSRPGVDGVLGTP--DII------DDLAAL----GLLDDKI-VVGSMNRGGLRGASFEMDDRYTGYNVSS 136 (307)
T ss_dssp HHHHHHHHHHHHSTTCCEEEECH--HHH------HHHHHT----TCCTTCE-EEEECCCCSCTTCTTTTSCCCCSCCHHH
T ss_pred HHHHHHHHHHHhccCCCEEEECc--chh------hcccce----EEecCcc-cccccCccccccCCCCccccccccCHHH
Confidence 56789999999999999998622 211 222222 2355553 3332221 00111 11 13445
Q ss_pred HHhCCCCEEEEcCCC-CCCCCHHHHHHHHHHHHhc-----CCeEEE--eCCCC---CCCCCCHHHHHHH---h-cC-CC-
Q 018253 149 GFAVGMHAALHINPY-YGKTSLEGLISHFDSVLSM-----GPTIIY--NVPSR---TGQDIPPRVIHTM---A-QS-PN- 211 (359)
Q Consensus 149 a~~~Gadav~v~pP~-y~~~s~~~l~~yf~~Ia~a-----~PiiiY--n~P~~---tg~~ls~e~l~~L---a-~~-pn- 211 (359)
|.++|+|++-+.... +..+.+.+.++.+.++.++ +|+++. =.|.. ...+.+++.+... + ++ -.
T Consensus 137 AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs 216 (307)
T 3fok_A 137 MVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDS 216 (307)
T ss_dssp HHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCC
T ss_pred HHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCc
Confidence 556799998754333 3456677788888888763 697764 22321 1235788877654 4 44 25
Q ss_pred ---eEEEeccCch-hhHhhhhCCceEEEecCC----chhh---hhhhh-cCCceeeccccccc
Q 018253 212 ---LAGVKECVGN-DRVEHYTGNGIVVWSGND----DQCH---DARWN-HGATGVISVTSNLV 262 (359)
Q Consensus 212 ---ivGiK~ss~d-~~l~~~~~~~~~v~~G~d----~~~~---~~~l~-~Ga~G~is~~an~~ 262 (359)
|+=++++ .+ .++.+.+.-.+-+..|.- +.++ ..++. .|+.|++.|=.-+.
T Consensus 217 ~~tivK~~y~-e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 217 SYTWMKLPVV-EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp SSEEEEEECC-TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSS
T ss_pred CCCEEEeCCc-HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhcc
Confidence 6656665 22 345444443344444432 1222 22367 69999987744333
No 246
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=83.85 E-value=4.6 Score=38.01 Aligned_cols=101 Identities=20% Similarity=0.105 Sum_probs=61.3
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
+...++.+++.|++.+.+.+. + . . ++++.+.+ ..++|+..+.+ .+.++.+.+.|+|++.+.
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g--~----p-~---~~~~~l~~---~g~~v~~~v~s------~~~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAG--N----P-T---KYIRELKE---NGTKVIPVVAS------DSLARMVERAGADAVIAE 151 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESS--C----C-H---HHHHHHHH---TTCEEEEEESS------HHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCC--C----c-H---HHHHHHHH---cCCcEEEEcCC------HHHHHHHHHcCCCEEEEE
Confidence 567788888999999887553 1 2 2 33444433 25788888753 445667888999999998
Q ss_pred CCCCCCC-CHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCC-HHHHHHHh
Q 018253 161 NPYYGKT-SLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIP-PRVIHTMA 207 (359)
Q Consensus 161 pP~y~~~-s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls-~e~l~~La 207 (359)
.+-+... .+..-.+.+.++.+. .||+.= .| |. ++.+.+..
T Consensus 152 g~~~GG~~G~~~~~~ll~~i~~~~~iPviaa-----GG--I~~~~dv~~al 195 (326)
T 3bo9_A 152 GMESGGHIGEVTTFVLVNKVSRSVNIPVIAA-----GG--IADGRGMAAAF 195 (326)
T ss_dssp CTTSSEECCSSCHHHHHHHHHHHCSSCEEEE-----SS--CCSHHHHHHHH
T ss_pred CCCCCccCCCccHHHHHHHHHHHcCCCEEEE-----CC--CCCHHHHHHHH
Confidence 7654322 111123555666654 576542 23 43 66666654
No 247
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=83.84 E-value=3.5 Score=36.56 Aligned_cols=88 Identities=13% Similarity=-0.064 Sum_probs=55.4
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcC-CCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQ-LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~-~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v 159 (359)
..++++.+.+.|++.|.+..-.|-+. ..+. .+++.+.+.+ .+|++++-+-.+.++ ++.+.++|||++++
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~----~~i~~i~~~~--~ipv~v~ggi~~~~~----~~~~l~~Gad~V~l 102 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAFGRGSNH----ELLAEVVGKL--DVQVELSGGIRDDES----LAAALATGCARVNV 102 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH----HHHHHHHHHC--SSEEEEESSCCSHHH----HHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccccCCChH----HHHHHHHHhc--CCcEEEECCCCCHHH----HHHHHHcCCCEEEE
Confidence 34556678899999999986554332 2333 5555666654 689999766555543 56666789999998
Q ss_pred cCCCCCCCCHHHHHHHHHHHH
Q 018253 160 INPYYGKTSLEGLISHFDSVL 180 (359)
Q Consensus 160 ~pP~y~~~s~~~l~~yf~~Ia 180 (359)
..-.. .+++.+.+..+.+.
T Consensus 103 g~~~l--~~p~~~~~~~~~~g 121 (244)
T 2y88_A 103 GTAAL--ENPQWCARVIGEHG 121 (244)
T ss_dssp CHHHH--HCHHHHHHHHHHHG
T ss_pred CchHh--hChHHHHHHHHHcC
Confidence 64322 12344444444443
No 248
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=83.69 E-value=3.3 Score=38.77 Aligned_cols=113 Identities=10% Similarity=0.079 Sum_probs=81.4
Q ss_pred EeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccC-ccC-----c--CCCCHHHHHHHHHHHHHhhCCCcEEEEec-
Q 018253 64 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGT-TGE-----G--QLMSWDEHIMLIGHTVNCFGASVKVIGNT- 134 (359)
Q Consensus 64 ~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~Gs-tGE-----~--~~LT~~Er~~li~~~v~~~~grvpViagv- 134 (359)
..++|.+| ....++++ +.|++.+++.|+ .+- - -.+|.+|....++.+.+.+. .||++-.
T Consensus 19 i~~~~a~D-------~~sA~~~~---~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~--~PviaD~d 86 (295)
T 1xg4_A 19 LQIVGTIN-------ANHALLAQ---RAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCS--LPLLVDAD 86 (295)
T ss_dssp EEEEECSS-------HHHHHHHH---HTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCC--SCEEEECT
T ss_pred EEEecCcC-------HHHHHHHH---HcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCC--CCEEecCC
Confidence 34677775 33444444 589999999988 332 1 36899999999999888764 6999965
Q ss_pred --CCCCHHHHHHHHHHHHhCCCCEEEEcCCC----C---C---CCCHHHHHHHHHHHHhc---CCeEEE
Q 018253 135 --GSNSTREAIHATEQGFAVGMHAALHINPY----Y---G---KTSLEGLISHFDSVLSM---GPTIIY 188 (359)
Q Consensus 135 --g~~st~~ai~la~~a~~~Gadav~v~pP~----y---~---~~s~~~l~~yf~~Ia~a---~PiiiY 188 (359)
.+.+..++.+.++...++||++|-+---. . . -.++++..+-.++..++ .+++|.
T Consensus 87 ~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~ 155 (295)
T 1xg4_A 87 IGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIM 155 (295)
T ss_dssp TCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEE
T ss_pred cccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 33489999999999999999999874322 1 1 14677777777777765 366655
No 249
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=83.66 E-value=2.5 Score=41.30 Aligned_cols=65 Identities=12% Similarity=0.115 Sum_probs=45.0
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag-vg~~st~~ai~la~~a~~~Gadav~v 159 (359)
...++.+++.|++-|++..+.|- .+...++++.+.+.. .+||++| +. + .+.++.+.++|||++.+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~-----~~~~~e~I~~ik~~~--~i~Vi~g~V~--t----~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH-----SLNIIRTLKEIKSKM--NIDVIVGNVV--T----EEATKELIENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS-----BHHHHHHHHHHHTTC--CCEEEEEEEC--S----HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC-----cccHHHHHHHHHhcC--CCeEEEeecC--C----HHHHHHHHHcCCCEEEE
Confidence 46788889999998876555442 233455666655544 5899974 43 2 45667788899999998
No 250
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=83.62 E-value=13 Score=36.84 Aligned_cols=87 Identities=7% Similarity=-0.052 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCc----cCcCCCCHHHHHHHHHHHHHhh-----------------------------
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTT----GEGQLMSWDEHIMLIGHTVNCF----------------------------- 124 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~Gst----GE~~~LT~~Er~~li~~~v~~~----------------------------- 124 (359)
.+.+.+.++.+.+ ++++|-++-|. |--.....+.-.++++.+.+..
T Consensus 196 ~~dy~~~a~~l~~-~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~ 274 (443)
T 1tv5_A 196 VDDLKYCINKIGR-YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFN 274 (443)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHHHC-------------------------
T ss_pred HHHHHHHHHHHhc-CCCEEEEeccCCCCcccccccCHHHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhccc
Confidence 5667777776654 89999998753 2112223344455666665532
Q ss_pred -------------------CCCcE-EEEecCC-CCHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 018253 125 -------------------GASVK-VIGNTGS-NSTREAIHATEQGFAVGMHAALHINPYYG 165 (359)
Q Consensus 125 -------------------~grvp-Viagvg~-~st~~ai~la~~a~~~Gadav~v~pP~y~ 165 (359)
..++| |++=+.. .+.++..+.++.+++.|+|++.+..-...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~ 336 (443)
T 1tv5_A 275 KNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQ 336 (443)
T ss_dssp -------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSC
T ss_pred ccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 13578 8887664 45568999999999999999999987653
No 251
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=83.58 E-value=3.6 Score=44.92 Aligned_cols=83 Identities=6% Similarity=0.045 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccC---------cCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGE---------GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHAT 146 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE---------~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la 146 (359)
-|.+.+.+.++.+.+.|+++|-++.+.-- ...-..+.-.++++.+.+.+ ++||++=+.. +..+..+.+
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~--~~Pv~vK~~~-~~~~~~~~a 721 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV--QIPFFAKLTP-NVTDIVSIA 721 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC--SSCEEEEECS-CSSCHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh--CCceEEEeCC-ChHHHHHHH
Confidence 36788999999999999999999865311 11124455566777776655 5899986643 445788999
Q ss_pred HHHHhCCCCEEEEcC
Q 018253 147 EQGFAVGMHAALHIN 161 (359)
Q Consensus 147 ~~a~~~Gadav~v~p 161 (359)
+.+++.|+|++.+++
T Consensus 722 ~~~~~~G~d~i~v~N 736 (1025)
T 1gte_A 722 RAAKEGGADGVTATN 736 (1025)
T ss_dssp HHHHHHTCSEEEECC
T ss_pred HHHHHcCCCEEEEec
Confidence 999999999999964
No 252
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=83.56 E-value=4.1 Score=41.43 Aligned_cols=100 Identities=10% Similarity=0.113 Sum_probs=77.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~G 153 (359)
-.-|.+-+.++++.+.+.|++-|.+.-|.|= +++.+-.++++.+.+.++..+|+=++. +++..-++..+..|.++|
T Consensus 170 ~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~~i~I~~H~-Hnd~GlAvAN~laAveAG 245 (539)
T 1rqb_A 170 PVHTVEGYVKLAGQLLDMGADSIALKDMAAL---LKPQPAYDIIKAIKDTYGQKTQINLHC-HSTTGVTEVSLMKAIEAG 245 (539)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEEETTCC---CCHHHHHHHHHHHHHHHCTTCCEEEEE-BCTTSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCCCCCC---cCHHHHHHHHHHHHHhcCCCceEEEEe-CCCCChHHHHHHHHHHhC
Confidence 3468999999999999999999999999985 789999999999999886457776654 567788899999999999
Q ss_pred CCEEEEc-CCCCC---CCCHHHHHHHHH
Q 018253 154 MHAALHI-NPYYG---KTSLEGLISHFD 177 (359)
Q Consensus 154 adav~v~-pP~y~---~~s~~~l~~yf~ 177 (359)
||.|=.. .|+-. .++-+.++..++
T Consensus 246 a~~VD~ti~g~GertGN~~lE~lv~~L~ 273 (539)
T 1rqb_A 246 VDVVDTAISSMSLGPGHNPTESVAEMLE 273 (539)
T ss_dssp CSEEEEBCGGGCSTTSBCBHHHHHHHTT
T ss_pred CCEEEEeccccCCCccChhHHHHHHHHH
Confidence 9998554 34332 234455554443
No 253
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=83.21 E-value=4.4 Score=38.72 Aligned_cols=88 Identities=14% Similarity=0.132 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCcc-------CcCC---------CC----HHHHHHHHHHHHHhhCCCcEEEEecC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTG-------EGQL---------MS----WDEHIMLIGHTVNCFGASVKVIGNTG 135 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstG-------E~~~---------LT----~~Er~~li~~~v~~~~grvpViagvg 135 (359)
+|.+.+.+.++..-+.|++++-..-|+| +-.. || ..--.+++..+.+.+++++|||+.=|
T Consensus 204 ~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GG 283 (345)
T 3oix_A 204 FDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGG 283 (345)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESS
T ss_pred CCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECC
Confidence 5888888888877777777665442222 1111 22 12225677777787877899997555
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCC-CCCCC
Q 018253 136 SNSTREAIHATEQGFAVGMHAALHINP-YYGKT 167 (359)
Q Consensus 136 ~~st~~ai~la~~a~~~Gadav~v~pP-~y~~~ 167 (359)
=.+.+++.+..+ +|||+|++-.. .|..|
T Consensus 284 I~s~~da~~~l~----aGAd~V~igra~~~~gP 312 (345)
T 3oix_A 284 VXTGRDAFEHIL----CGASMVQIGTALHQEGP 312 (345)
T ss_dssp CCSHHHHHHHHH----HTCSEEEESHHHHHHCT
T ss_pred CCChHHHHHHHH----hCCCEEEEChHHHhcCh
Confidence 567778777764 69999999988 44433
No 254
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=83.14 E-value=13 Score=35.28 Aligned_cols=70 Identities=13% Similarity=-0.013 Sum_probs=46.0
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHH----HHHHhhC------C--CcEEEEecCCCCHHHHHHHHHHHH
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIG----HTVNCFG------A--SVKVIGNTGSNSTREAIHATEQGF 150 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~----~~v~~~~------g--rvpViagvg~~st~~ai~la~~a~ 150 (359)
++++.++++|++++.+.-+.| ..||.+...+.+. .+++.++ | .+|+|..+.+. .. +.....
T Consensus 201 ~~~~~~i~aGad~i~i~D~~~--~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~--~~---~l~~l~ 273 (367)
T 1r3s_A 201 PYLVGQVVAGAQALQLFESHA--GHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG--HF---ALEELA 273 (367)
T ss_dssp HHHHHHHHTTCSEEEEEETTG--GGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC--GG---GHHHHT
T ss_pred HHHHHHHHhCCCEEEEecCcc--ccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc--HH---HHHHHH
Confidence 345566789999999988887 4799988766542 2233333 3 58888876543 22 344667
Q ss_pred hCCCCEEEE
Q 018253 151 AVGMHAALH 159 (359)
Q Consensus 151 ~~Gadav~v 159 (359)
+.|+|++-+
T Consensus 274 ~~g~d~i~~ 282 (367)
T 1r3s_A 274 QAGYEVVGL 282 (367)
T ss_dssp TSSCSEEEC
T ss_pred hcCCCEEEe
Confidence 789996654
No 255
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=83.12 E-value=3.8 Score=36.51 Aligned_cols=77 Identities=6% Similarity=-0.004 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v 159 (359)
...++++.+.+.|++.|.+..-++.+. ......++++.+.+.+ .+||+++-+-.+. +.++.+.+.|||++++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~~--~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~----~~~~~~~~~Gad~V~l 103 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATHE--ERAILLDVVARVAERV--FIPLTVGGGVRSL----EDARKLLLSGADKVSV 103 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSSTT--CHHHHHHHHHHHHTTC--CSCEEEESSCCSH----HHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCcccc--CccccHHHHHHHHHhC--CCCEEEECCcCCH----HHHHHHHHcCCCEEEE
Confidence 345667778889999988875543322 2334455566655543 6899987665554 3556666679999999
Q ss_pred cCCCC
Q 018253 160 INPYY 164 (359)
Q Consensus 160 ~pP~y 164 (359)
....+
T Consensus 104 g~~~l 108 (252)
T 1ka9_F 104 NSAAV 108 (252)
T ss_dssp CHHHH
T ss_pred ChHHH
Confidence 76555
No 256
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=82.99 E-value=21 Score=33.35 Aligned_cols=71 Identities=11% Similarity=-0.038 Sum_probs=45.4
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHH----HHhhC--CCcEEEEecCCCCHHHHHHHHHHHHhCCCC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHT----VNCFG--ASVKVIGNTGSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~----v~~~~--grvpViagvg~~st~~ai~la~~a~~~Gad 155 (359)
.++++.++++|++++.+.-+.|- .||.++..+++.-. ++.+. +.+|++..+.+. .. +.....+.|+|
T Consensus 182 ~~~~~~~~~aGad~i~i~d~~~~--~lsp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~g~--~~---~l~~l~~~g~d 254 (338)
T 2eja_A 182 LAYLKEQIKAGADVVQIFDSWVN--NLSLEDYGEYVYPYVNYLISELKDFSDTPVIYFFRGS--SS---FIDLAVDYRAD 254 (338)
T ss_dssp HHHHHHHHHTTCSEEEEEETTGG--GSCHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEESSH--HH---HHHHHTTSCCS
T ss_pred HHHHHHHHHhCCCEEEEecCccc--cCCHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcCCc--HH---HHHHHHHcCCC
Confidence 33455667899999998887664 78998876554222 22221 247888776432 33 44456778999
Q ss_pred EEEE
Q 018253 156 AALH 159 (359)
Q Consensus 156 av~v 159 (359)
++.+
T Consensus 255 ~~~~ 258 (338)
T 2eja_A 255 ALSV 258 (338)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7654
No 257
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=82.95 E-value=0.96 Score=43.88 Aligned_cols=90 Identities=19% Similarity=0.236 Sum_probs=54.4
Q ss_pred HHHHHHHHCCCCEEEEccCccCcC--CCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQ--LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~--~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
..++.+.+.|+++|.+.+..|-.. ..+ -.+++..+.+.++ .|||+.=|=.+..++.+.. .+|||+|++-
T Consensus 237 e~a~~a~~aGad~I~vs~~gg~~~d~~~~---~~~~l~~v~~~~~--~pVia~GGI~~~~dv~kal----~~GAdaV~iG 307 (380)
T 1p4c_A 237 EDADRCIAEGADGVILSNHGGRQLDCAIS---PMEVLAQSVAKTG--KPVLIDSGFRRGSDIVKAL----ALGAEAVLLG 307 (380)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCTTCCC---GGGTHHHHHHHHC--SCEEECSSCCSHHHHHHHH----HTTCSCEEES
T ss_pred HHHHHHHHcCCCEEEEcCCCCCcCCCCcC---HHHHHHHHHHHcC--CeEEEECCCCCHHHHHHHH----HhCCcHhheh
Confidence 356778899999999966544211 111 1334445555554 3888744444566666544 4799999999
Q ss_pred CCCCCCC---CHHHHHHHHHHHHh
Q 018253 161 NPYYGKT---SLEGLISHFDSVLS 181 (359)
Q Consensus 161 pP~y~~~---s~~~l~~yf~~Ia~ 181 (359)
.|+++.. .++++.++.+.+.+
T Consensus 308 r~~l~~~~~~g~~~v~~~~~~l~~ 331 (380)
T 1p4c_A 308 RATLYGLAARGETGVDEVLTLLKA 331 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9987543 23444445444443
No 258
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=82.92 E-value=7 Score=34.58 Aligned_cols=168 Identities=13% Similarity=0.018 Sum_probs=89.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCc---CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEG---QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 152 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~---~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~ 152 (359)
.|+..+.+.++.+.+.|++-+-+----|.| .+... ++++...+.. +.|+.+++--++.. ++++.+.++
T Consensus 16 ~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~----~~~~~lr~~~--~~~~~v~lmv~d~~---~~i~~~~~a 86 (228)
T 1h1y_A 16 SDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGA----PVIQSLRKHT--KAYLDCHLMVTNPS---DYVEPLAKA 86 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCH----HHHHHHHTTC--CSEEEEEEESSCGG---GGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCH----HHHHHHHhhc--CCcEEEEEEecCHH---HHHHHHHHc
Confidence 347788889999999999975333122322 22223 4555555544 35777666555543 356667779
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc---CCCeEEE--------eccCc
Q 018253 153 GMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGV--------KECVG 220 (359)
Q Consensus 153 Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~---~pnivGi--------K~ss~ 220 (359)
|+|++.+..=. +++.+.+..+.+.+. ..+++==.|. | +.+.++.+.+ ....+++ +....
T Consensus 87 gad~v~vH~~~----~~~~~~~~~~~i~~~g~~igv~~~p~-t----~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~ 157 (228)
T 1h1y_A 87 GASGFTFHIEV----SRDNWQELIQSIKAKGMRPGVSLRPG-T----PVEEVFPLVEAENPVELVLVMTVEPGFGGQKFM 157 (228)
T ss_dssp TCSEEEEEGGG----CTTTHHHHHHHHHHTTCEEEEEECTT-S----CGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCC
T ss_pred CCCEEEECCCC----cccHHHHHHHHHHHcCCCEEEEEeCC-C----CHHHHHHHHhcCCCCCEEEEEeecCCCCcccCC
Confidence 99999765211 111124555666544 3444322342 1 2344555554 4555555 11101
Q ss_pred -h--hh---Hhhhh-CCceEEEecCCchhhhhhhhcCCceeecccccc
Q 018253 221 -N--DR---VEHYT-GNGIVVWSGNDDQCHDARWNHGATGVISVTSNL 261 (359)
Q Consensus 221 -d--~~---l~~~~-~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~ 261 (359)
. .+ +++.. +-.+.+-.|-...-.......|+|+++.|.+-+
T Consensus 158 ~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aGaD~vvvGsai~ 205 (228)
T 1h1y_A 158 PEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIF 205 (228)
T ss_dssp GGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHTCCEEEESHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcCCCEEEECHHHH
Confidence 1 12 22333 223444456654444444677999999886643
No 259
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=82.83 E-value=33 Score=32.78 Aligned_cols=145 Identities=8% Similarity=-0.021 Sum_probs=98.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
.+.+.+.+.+...++.|.+++=+-...+ +.++=.++++.+.+.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 161 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~-----~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 235 (393)
T 2og9_A 161 TPIDQLMVNASASIERGIGGIKLKVGQP-----DGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNL 235 (393)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCCS-----CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC-----CHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCC
Confidence 4788999999999999999887643321 35666778888888888889998865 45689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC--chh---hHh
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RVE 225 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss--~d~---~l~ 225 (359)
+.+ --|.- ..+ .+.++.|.+. .||+.=. .-.+++.++++.+ .-+++.+|-+- +-. ++.
T Consensus 236 ~~i--E~P~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 302 (393)
T 2og9_A 236 VWI--EEPLD-AYD----HEGHAALALQFDTPIATGE------MLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIA 302 (393)
T ss_dssp SCE--ECCSC-TTC----HHHHHHHHHHCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHH
T ss_pred CEE--ECCCC-ccc----HHHHHHHHHhCCCCEEeCC------CcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHH
Confidence 854 34432 112 4555666665 5776543 2346888888863 56889999653 222 333
Q ss_pred hhh-CCceEEEecC
Q 018253 226 HYT-GNGIVVWSGN 238 (359)
Q Consensus 226 ~~~-~~~~~v~~G~ 238 (359)
+++ .-++.++.+.
T Consensus 303 ~~A~~~gi~~~~h~ 316 (393)
T 2og9_A 303 SLAEHAGLMLAPHF 316 (393)
T ss_dssp HHHHHTTCEECCCS
T ss_pred HHHHHcCCEEeccC
Confidence 332 2456666553
No 260
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=82.81 E-value=19 Score=32.15 Aligned_cols=124 Identities=10% Similarity=-0.013 Sum_probs=75.2
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe-c-----------------CCC-------
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-T-----------------GSN------- 137 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag-v-----------------g~~------- 137 (359)
..++.+.+.|.+||=+...... .++.++..++.+.+.+ . .+.+.+. + ++.
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~--~~~~~~~~~~~~~l~~-~--gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ 99 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPH--TRTREHAQAFRAKCDA-A--GIQVTVIFGGFDGESYADIPTTARTVGLVPLETRAS 99 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGG--GCSHHHHHHHHHHHHH-T--TCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHH
T ss_pred HHHHHHHHcCCCEEEecCCCCC--cCCHHHHHHHHHHHHH-c--CCEEEEEeeccCCcccccccccccccCCCCHHHHHH
Confidence 4677888899999887764332 4676666666655443 3 3444332 1 111
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCC---HHHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHhc-
Q 018253 138 STREAIHATEQGFAVGMHAALHINPYYGKTS---LEGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMAQ- 208 (359)
Q Consensus 138 st~~ai~la~~a~~~Gadav~v~pP~y~~~s---~~~l~~yf~~Ia~a-----~PiiiYn~P~~tg~~ls~e~l~~La~- 208 (359)
+.+...+.++.|+++|+..+.+.+.+....+ .+.+.+.++.+++. +.+.+-|.+ -+++.+.+|.+
T Consensus 100 ~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~------~~~~~~~~l~~~ 173 (290)
T 3tva_A 100 RVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ------ESADHLLEFIED 173 (290)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS------SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC------CCHHHHHHHHHh
Confidence 2345567777888999999988765442212 34566667777652 356677754 25777777763
Q ss_pred --CCCeEEEec
Q 018253 209 --SPNLAGVKE 217 (359)
Q Consensus 209 --~pnivGiK~ 217 (359)
.|++.-.=|
T Consensus 174 ~~~~~~g~~~D 184 (290)
T 3tva_A 174 VNRPNLGINFD 184 (290)
T ss_dssp HCCTTEEEEEC
T ss_pred cCCCCEEEEec
Confidence 477544334
No 261
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=82.54 E-value=24 Score=32.74 Aligned_cols=99 Identities=17% Similarity=0.139 Sum_probs=64.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Ga 154 (359)
.++.+.+.+.++.+.+.|+..|++. .||.+.+..+.-.++++.+.+. .+.|-+..+..+ . +..+..+++|+
T Consensus 83 ~ls~eei~~~i~~~~~~g~~~i~~~--gGe~p~~~~~~~~~li~~i~~~---~~~i~~s~g~l~-~---e~l~~L~~ag~ 153 (348)
T 3iix_A 83 RMTPEEIVERARLAVQFGAKTIVLQ--SGEDPYXMPDVISDIVKEIKKM---GVAVTLSLGEWP-R---EYYEKWKEAGA 153 (348)
T ss_dssp BCCHHHHHHHHHHHHHTTCSEEEEE--ESCCGGGTTHHHHHHHHHHHTT---SCEEEEECCCCC-H---HHHHHHHHHTC
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEEE--eCCCCCccHHHHHHHHHHHHhc---CceEEEecCCCC-H---HHHHHHHHhCC
Confidence 3678888888888888899988874 4787777777778888777654 456665555433 3 33444555788
Q ss_pred CEEEEcCCCCC---------CCCHHHHHHHHHHHHhc
Q 018253 155 HAALHINPYYG---------KTSLEGLISHFDSVLSM 182 (359)
Q Consensus 155 dav~v~pP~y~---------~~s~~~l~~yf~~Ia~a 182 (359)
|.+.+..-.+. ..+.+.+.+-.+.+.+.
T Consensus 154 ~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~ 190 (348)
T 3iix_A 154 DRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKEL 190 (348)
T ss_dssp CEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHT
T ss_pred CEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHh
Confidence 88775432221 12455555555555554
No 262
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=82.49 E-value=4.9 Score=38.00 Aligned_cols=67 Identities=18% Similarity=0.123 Sum_probs=47.9
Q ss_pred HHHHHHHHCC--CCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 83 DLVNMQIVNG--AEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-TGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 83 ~li~~li~~G--v~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag-vg~~st~~ai~la~~a~~~Gadav~v 159 (359)
+.++.+++.| ++.+.++.+.| ....-.++++.+++.++ ..||+.| +. + .+.++.+.++|||++.+
T Consensus 109 ~~a~~~~~~g~~~~~i~i~~~~G-----~~~~~~~~i~~lr~~~~-~~~vi~G~v~--s----~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITIDIAHG-----HSNAVINMIQHIKKHLP-ESFVIAGNVG--T----PEAVRELENAGADATKV 176 (336)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSC-----CSHHHHHHHHHHHHHCT-TSEEEEEEEC--S----HHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhcCCCCCEEEEECCCC-----CcHHHHHHHHHHHHhCC-CCEEEECCcC--C----HHHHHHHHHcCCCEEEE
Confidence 4467788999 89887765444 33455667887777765 3688877 43 2 36788889999999999
Q ss_pred cC
Q 018253 160 IN 161 (359)
Q Consensus 160 ~p 161 (359)
..
T Consensus 177 s~ 178 (336)
T 1ypf_A 177 GI 178 (336)
T ss_dssp CS
T ss_pred ec
Confidence 53
No 263
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=82.48 E-value=25 Score=32.19 Aligned_cols=103 Identities=18% Similarity=0.085 Sum_probs=69.1
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC-CcEEEEecCCCCHHHHHHHHHHHHh
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSNSTREAIHATEQGFA 151 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g-rvpViagvg~~st~~ai~la~~a~~ 151 (359)
.|.-..+.-..-++..++.|++-|=+-=.-|..-+=.+++-.+-+..+++..++ -++||.-++..+.++-++.++.+.+
T Consensus 105 ~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~e 184 (260)
T 3r12_A 105 LGANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKL 184 (260)
T ss_dssp TCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 555566777777888888898887666666654444566666666666666554 3677887777778888888888888
Q ss_pred CCCCEEEEcCCCCC-CCCHHHHHHH
Q 018253 152 VGMHAALHINPYYG-KTSLEGLISH 175 (359)
Q Consensus 152 ~Gadav~v~pP~y~-~~s~~~l~~y 175 (359)
+|||.|=...=|.. ..+.+++.-+
T Consensus 185 aGADfVKTSTGf~~~GAT~edV~lm 209 (260)
T 3r12_A 185 AGAHFVKTSTGFGTGGATAEDVHLM 209 (260)
T ss_dssp TTCSEEECCCSSSSCCCCHHHHHHH
T ss_pred hCcCEEEcCCCCCCCCCCHHHHHHH
Confidence 99987766644332 2355544333
No 264
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=82.34 E-value=23 Score=32.18 Aligned_cols=104 Identities=13% Similarity=0.020 Sum_probs=58.3
Q ss_pred CCCHHHHHHHHHHHHHCC-CCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec----CCCCHHHHHHHHHHH
Q 018253 75 RFDLEAYDDLVNMQIVNG-AEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT----GSNSTREAIHATEQG 149 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~G-v~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv----g~~st~~ai~la~~a 149 (359)
+.+.+...++++..++.| ++-+=+ |...-. ...++++.+. .++++||+.- +..+.++.+++.+++
T Consensus 96 ~~~~~~~~~ll~~~~~~g~~d~iDv-----El~~~~--~~~~l~~~~~---~~~~kvI~S~Hdf~~tP~~~el~~~~~~~ 165 (257)
T 2yr1_A 96 PLNEAEVRRLIEAICRSGAIDLVDY-----ELAYGE--RIADVRRMTE---ECSVWLVVSRHYFDGTPRKETLLADMRQA 165 (257)
T ss_dssp SSCHHHHHHHHHHHHHHTCCSEEEE-----EGGGTT--HHHHHHHHHH---HTTCEEEEEEEESSCCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCCEEEE-----ECCCCh--hHHHHHHHHH---hCCCEEEEEecCCCCCcCHHHHHHHHHHH
Confidence 457777777777777766 666555 332211 3334443332 2456777754 234667788888888
Q ss_pred HhCCCCEEEEcCCCCCCCCHHHHHHHHH---HHHh--cCCeEEEeCC
Q 018253 150 FAVGMHAALHINPYYGKTSLEGLISHFD---SVLS--MGPTIIYNVP 191 (359)
Q Consensus 150 ~~~Gadav~v~pP~y~~~s~~~l~~yf~---~Ia~--a~PiiiYn~P 191 (359)
++.|||-+=+.... .+.++..+-++ .+.+ ..|++.|+.-
T Consensus 166 ~~~gaDivKia~~a---~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG 209 (257)
T 2yr1_A 166 ERYGADIAKVAVMP---KSPEDVLVLLQATEEARRELAIPLITMAMG 209 (257)
T ss_dssp HHTTCSEEEEEECC---SSHHHHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred HhcCCCEEEEEecc---CCHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 88888877333222 23444444443 3321 1588888753
No 265
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=82.26 E-value=4.4 Score=36.28 Aligned_cols=171 Identities=13% Similarity=0.013 Sum_probs=93.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCc-CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG-QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~-~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~G 153 (359)
..|+..+.+-++.+.+.|++-+-+==.-|-| +.+|. -..+++...+..+.++|+-++.--++.++ +.+.+.++|
T Consensus 13 ~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~--G~~~v~~ir~~~~~~~~~dvhLmv~~p~~---~i~~~~~aG 87 (228)
T 3ovp_A 13 NSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITF--GHPVVESLRKQLGQDPFFDMHMMVSKPEQ---WVKPMAVAG 87 (228)
T ss_dssp TSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCB--CHHHHHHHHHHHCSSSCEEEEEECSCGGG---GHHHHHHHT
T ss_pred eCCchhHHHHHHHHHHcCCCEEEEEecCCCcCccccc--CHHHHHHHHHhhCCCCcEEEEEEeCCHHH---HHHHHHHcC
Confidence 5788899999999999999866652222333 22331 22366666666534567777665555554 556677899
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhcC----------CCeEEEeccCch-
Q 018253 154 MHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQS----------PNLAGVKECVGN- 221 (359)
Q Consensus 154 adav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~~----------pnivGiK~ss~d- 221 (359)
||.+.+.. -.. +.+.+..+.+-+. ..+.+==+|. | +.+.++.+.+. |.+-|-|.....
T Consensus 88 ad~itvH~---Ea~--~~~~~~i~~i~~~G~k~gval~p~-t----~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l 157 (228)
T 3ovp_A 88 ANQYTFHL---EAT--ENPGALIKDIRENGMKVGLAIKPG-T----SVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMM 157 (228)
T ss_dssp CSEEEEEG---GGC--SCHHHHHHHHHHTTCEEEEEECTT-S----CGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGH
T ss_pred CCEEEEcc---CCc--hhHHHHHHHHHHcCCCEEEEEcCC-C----CHHHHHHHhccCCeEEEeeecCCCCCcccCHHHH
Confidence 99988852 111 2355555555554 2333323342 1 23444444432 333333321111
Q ss_pred hhH---hhhh-CCceEEEecCCchhhhhhhhcCCceeeccccc
Q 018253 222 DRV---EHYT-GNGIVVWSGNDDQCHDARWNHGATGVISVTSN 260 (359)
Q Consensus 222 ~~l---~~~~-~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an 260 (359)
.++ ++.. +-.+.|=.|-..........+|+++++.|.+-
T Consensus 158 ~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvGsaI 200 (228)
T 3ovp_A 158 PKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAI 200 (228)
T ss_dssp HHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEESHHH
T ss_pred HHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEeHHH
Confidence 122 2222 12344545554444455578999999998653
No 266
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=82.24 E-value=7.9 Score=37.10 Aligned_cols=74 Identities=11% Similarity=0.144 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccC----------------------------------------cCCCCHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGE----------------------------------------GQLMSWDEHIML 116 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE----------------------------------------~~~LT~~Er~~l 116 (359)
|.+..++++++-.++|+.+|++.--+-- -..+|++.
T Consensus 133 d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~---- 208 (352)
T 3sgz_A 133 DWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWND---- 208 (352)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHH----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHH----
Confidence 7788999999999999999887543311 13455553
Q ss_pred HHHHHHhhCCCcEEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 117 IGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 117 i~~~v~~~~grvpVia-gvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
++.+++.+ ++||++ ++ .+ .+.++.+.++|+|++.+...
T Consensus 209 i~~lr~~~--~~PvivK~v--~~----~e~A~~a~~~GaD~I~vsn~ 247 (352)
T 3sgz_A 209 LSLLQSIT--RLPIILKGI--LT----KEDAELAMKHNVQGIVVSNH 247 (352)
T ss_dssp HHHHHHHC--CSCEEEEEE--CS----HHHHHHHHHTTCSEEEECCG
T ss_pred HHHHHHhc--CCCEEEEec--Cc----HHHHHHHHHcCCCEEEEeCC
Confidence 55555554 578877 45 23 45688899999999999863
No 267
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=82.15 E-value=5 Score=37.05 Aligned_cols=90 Identities=13% Similarity=0.118 Sum_probs=49.4
Q ss_pred CCce-EEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE---ccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec
Q 018253 59 ALRL-ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIV---GGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT 134 (359)
Q Consensus 59 ~~Gi-~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v---~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv 134 (359)
-.|+ ...+++|-+. .+.+++..+. ..|. +++ .|+||+-..++ ++-.++++.+.+.. ++||++|.
T Consensus 148 ~~gl~~I~lvap~t~-----~eri~~i~~~--~~gf--iY~vs~~GvTG~~~~~~-~~~~~~v~~vr~~~--~~Pv~vGf 215 (271)
T 3nav_A 148 KFGIQPIFIAPPTAS-----DETLRAVAQL--GKGY--TYLLSRAGVTGAETKAN-MPVHALLERLQQFD--APPALLGF 215 (271)
T ss_dssp HTTCEEEEEECTTCC-----HHHHHHHHHH--CCSC--EEECCCC--------CC-HHHHHHHHHHHHTT--CCCEEECS
T ss_pred HcCCeEEEEECCCCC-----HHHHHHHHHH--CCCe--EEEEeccCCCCcccCCc-hhHHHHHHHHHHhc--CCCEEEEC
Confidence 3454 3456677553 2444444432 2232 443 48899987776 44667788877765 58999998
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCCC
Q 018253 135 GSNSTREAIHATEQGFAVGMHAALHINPYY 164 (359)
Q Consensus 135 g~~st~~ai~la~~a~~~Gadav~v~pP~y 164 (359)
|=.+.+++ +.+.+.|||++++-.=.+
T Consensus 216 GIst~e~~----~~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 216 GISEPAQV----KQAIEAGAAGAISGSAVV 241 (271)
T ss_dssp SCCSHHHH----HHHHHTTCSEEEESHHHH
T ss_pred CCCCHHHH----HHHHHcCCCEEEECHHHH
Confidence 86555443 345568999999975433
No 268
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=82.06 E-value=2.9 Score=37.67 Aligned_cols=89 Identities=15% Similarity=0.186 Sum_probs=51.5
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
....++.+.+.|++.|.+..-.+.+.... .-.++++.+.+.. .+||+++-+-.+.++ ++.+.+.|||++++.
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g--~~~~~i~~i~~~~--~iPvi~~ggi~~~~~----i~~~~~~Gad~v~lg 103 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGTKSG--YDTEMIRFVRPLT--TLPIIASGGAGKMEH----FLEAFLAGADKALAA 103 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSCSSC--CCHHHHHHHGGGC--CSCEEEESCCCSTHH----HHHHHHHTCSEEECC
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccCCCc--ccHHHHHHHHHhc--CCCEEEECCCCCHHH----HHHHHHcCCcHhhhh
Confidence 45567777889999999865433221111 1134444544443 689999866555554 344456899999998
Q ss_pred CCCC-CCCCHHHHHHHHH
Q 018253 161 NPYY-GKTSLEGLISHFD 177 (359)
Q Consensus 161 pP~y-~~~s~~~l~~yf~ 177 (359)
...+ ...+.+.+.+..+
T Consensus 104 ~~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 104 SVFHFREIDMRELKEYLK 121 (266)
T ss_dssp CCC------CHHHHHHCC
T ss_pred HHHHhCCCCHHHHHHHHH
Confidence 7777 3223344554443
No 269
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=81.93 E-value=36 Score=32.35 Aligned_cols=124 Identities=9% Similarity=0.005 Sum_probs=90.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
-|.+.+.+.+....+.|.+++=+-... ..++-.++++.+++.++ ++++.+-+ ++.+.++++++++..++.|+
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~------~~~~~~e~v~avr~a~g-d~~l~vD~n~~~~~~~a~~~~~~l~~~~i 218 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR------GEKLDLEITAAVRGEIG-DARLRLDANEGWSVHDAINMCRKLEKYDI 218 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHHTTST-TCEEEEECTTCCCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC------CHHHHHHHHHHHHHHcC-CcEEEEecCCCCCHHHHHHHHHHHHhcCC
Confidence 477889899999999999998775432 56666788888888887 88988855 45689999999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 219 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss 219 (359)
+.+ --|+ ...+ .+.+++|.+. .||+.=. .-.+++.+.++.+ .-+++.+|-+-
T Consensus 219 ~~i--EqP~-~~~~----~~~~~~l~~~~~iPI~~de------~i~~~~~~~~~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 219 EFI--EQPT-VSWS----IPAMAHVREKVGIPIVADQ------AAFTLYDVYEICRQRAADMICIGPRE 274 (384)
T ss_dssp SEE--ECCS-CTTC----HHHHHHHHHHCSSCEEEST------TCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred CEE--eCCC-Chhh----HHHHHHHHhhCCCCEEEeC------CcCCHHHHHHHHHcCCCCEEEEcchh
Confidence 854 4554 1112 4556666664 5776432 2347888998873 57899999753
No 270
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=81.92 E-value=18 Score=31.78 Aligned_cols=133 Identities=8% Similarity=-0.045 Sum_probs=73.6
Q ss_pred HHHHHHHHHHCCCCEEEEc-cCccCcCCCCHHHHHHHHHHHHHhhCCCcEEE-Eec----CCCC-------HHHHHHHHH
Q 018253 81 YDDLVNMQIVNGAEGMIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNT----GSNS-------TREAIHATE 147 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~-GstGE~~~LT~~Er~~li~~~v~~~~grvpVi-agv----g~~s-------t~~ai~la~ 147 (359)
+...++.+.+.|.+||=+. ..... ..++.++..++ +...+.. .+.+. ++. .+.+ .+...+.++
T Consensus 16 ~~~~l~~~~~~G~~~vEl~~~~~~~-~~~~~~~~~~~-~~~l~~~--gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 91 (278)
T 1i60_A 16 LKLDLELCEKHGYDYIEIRTMDKLP-EYLKDHSLDDL-AEYFQTH--HIKPLALNALVFFNNRDEKGHNEIITEFKGMME 91 (278)
T ss_dssp HHHHHHHHHHTTCSEEEEETTTHHH-HHTTSSCHHHH-HHHHHTS--SCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEccHHHHH-HHhccCCHHHH-HHHHHHc--CCCeeeeccccccccCCHHHHHHHHHHHHHHHH
Confidence 5667777788999998876 43211 01122222233 3333333 34443 222 2112 345667778
Q ss_pred HHHhCCCCEEEEcCCCCCC-CC-H---HHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHhc---CCCeEE
Q 018253 148 QGFAVGMHAALHINPYYGK-TS-L---EGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMAQ---SPNLAG 214 (359)
Q Consensus 148 ~a~~~Gadav~v~pP~y~~-~s-~---~~l~~yf~~Ia~a-----~PiiiYn~P~~tg~~ls~e~l~~La~---~pnivG 214 (359)
.|+++|++.+.+.+++... .+ + +.+.+.++.+++. +.+.+-|.+......-+++.+.+|.+ .|++.-
T Consensus 92 ~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 171 (278)
T 1i60_A 92 TCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTVNRDNVGL 171 (278)
T ss_dssp HHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHHHHCCTTEEE
T ss_pred HHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHHHHhCCCCeeE
Confidence 8899999999886554322 23 2 3456666666542 46788887643213346777777763 467543
Q ss_pred Eec
Q 018253 215 VKE 217 (359)
Q Consensus 215 iK~ 217 (359)
.=|
T Consensus 172 ~~D 174 (278)
T 1i60_A 172 VLD 174 (278)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 271
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=81.85 E-value=6.7 Score=35.78 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=59.8
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhC--CCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG--ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~--grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
.+++.+.+. ++.+++.+-+-|+..--. -.++++.+.+.+. +.+|||++=+-.+.++..++.+.. -|++++++-
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~G~--d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~--~G~~gvivg 236 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCGGI--DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELS--HGKVDLTFG 236 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------CCC--CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHH--TTCEEEECC
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcCCC--CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhc--CCCCEEEee
Confidence 556666677 899999876654443221 2455666666663 268999977777888887776642 299999999
Q ss_pred CC---CCCC-CCHHHHHHHHHH
Q 018253 161 NP---YYGK-TSLEGLISHFDS 178 (359)
Q Consensus 161 pP---~y~~-~s~~~l~~yf~~ 178 (359)
.- |+.+ .+-+++.+|-++
T Consensus 237 ~al~l~~g~~~~~~~~~~~~~~ 258 (260)
T 2agk_A 237 SSLDIFGGNLVKFEDCCRWNEK 258 (260)
T ss_dssp TTBGGGTCSSBCHHHHHHHHHH
T ss_pred CCHHHcCCCCCCHHHHHHHHHh
Confidence 88 5566 688888887653
No 272
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=81.84 E-value=1.6 Score=38.88 Aligned_cols=86 Identities=17% Similarity=0.236 Sum_probs=54.0
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcC--CCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC---CCC
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQ--LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV---GMH 155 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~--~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~---Gad 155 (359)
....++.+.+.|++.|++.+.+-++. ....+ +++.+.+.. ++||++.=|-.+.+++.++ .+. |+|
T Consensus 151 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~----~~~~l~~~~--~ipvia~GGI~~~~d~~~~----~~~~~~Gad 220 (244)
T 2y88_A 151 LWDVLERLDSEGCSRFVVTDITKDGTLGGPNLD----LLAGVADRT--DAPVIASGGVSSLDDLRAI----ATLTHRGVE 220 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHH----HHHHHHTTC--SSCEEEESCCCSHHHHHHH----HTTGGGTEE
T ss_pred HHHHHHHHHhCCCCEEEEEecCCccccCCCCHH----HHHHHHHhC--CCCEEEECCCCCHHHHHHH----HhhccCCCC
Confidence 35566677788999999888554433 23333 344444433 6899985444445655554 335 999
Q ss_pred EEEEcCCCCCCC-CHHHHHHHH
Q 018253 156 AALHINPYYGKT-SLEGLISHF 176 (359)
Q Consensus 156 av~v~pP~y~~~-s~~~l~~yf 176 (359)
++++..-.|..+ +.+++.+|.
T Consensus 221 ~v~vG~al~~~~~~~~~~~~~~ 242 (244)
T 2y88_A 221 GAIVGKALYARRFTLPQALAAV 242 (244)
T ss_dssp EEEECHHHHTTSSCHHHHHHHT
T ss_pred EEEEcHHHHCCCcCHHHHHHHh
Confidence 999997766544 566666653
No 273
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=81.83 E-value=1.7 Score=41.06 Aligned_cols=112 Identities=16% Similarity=0.213 Sum_probs=61.1
Q ss_pred HHHHHHHCCCCEEEEcc-----CccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEE
Q 018253 84 LVNMQIVNGAEGMIVGG-----TTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 158 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~G-----stGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~ 158 (359)
.+..+.+.|+|+|++-| .+|+. . -.+++..+++.+ ++|||+.=|=.+.++..+.. ++|||+|+
T Consensus 136 ~a~~a~~~GaD~i~v~g~~~GG~~G~~---~---~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al----~~GA~gV~ 203 (326)
T 3bo9_A 136 LARMVERAGADAVIAEGMESGGHIGEV---T---TFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAF----ALGAEAVQ 203 (326)
T ss_dssp HHHHHHHTTCSCEEEECTTSSEECCSS---C---HHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHH----HHTCSEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCccCCCc---c---HHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHH----HhCCCEEE
Confidence 45567789999999944 33532 2 234555555554 68998743333455554433 37999999
Q ss_pred EcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCC-CCCCCCCCHHHHHHHh
Q 018253 159 HINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVP-SRTGQDIPPRVIHTMA 207 (359)
Q Consensus 159 v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P-~~tg~~ls~e~l~~La 207 (359)
+...++..+....-..|=+.+.++ ..+++-..+ ++.+..|......++.
T Consensus 204 vGs~~~~~~e~~~~~~~k~~~~~~~~~~~~~~~~~~G~p~R~l~n~~~~~~~ 255 (326)
T 3bo9_A 204 MGTRFVASVESDVHPVYKEKIVKASIRDTVVTGAKLGHPARVLRTPFARKIQ 255 (326)
T ss_dssp ESHHHHTBSSCCSCHHHHHHHHHCCTTCEEEECTTTTCCEEEECCHHHHHHH
T ss_pred echHHHcCccccccHHHHHHHHhcccccEEEecccCCCceEEEecHHHHHhh
Confidence 999887653211222233334344 244443322 2333345555555544
No 274
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=81.74 E-value=6 Score=36.77 Aligned_cols=118 Identities=13% Similarity=0.006 Sum_probs=78.5
Q ss_pred ceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHH---HHHHHHHHHHHhhCC-CcEEEEecCC
Q 018253 61 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWD---EHIMLIGHTVNCFGA-SVKVIGNTGS 136 (359)
Q Consensus 61 Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~---Er~~li~~~v~~~~g-rvpViagvg~ 136 (359)
++-.+.++-| +.|.-..+.-..-++.-++.|++-|=+.-.-|..-+=.++ +-.+-+..+++.+++ -++||.-++-
T Consensus 89 ~v~v~tVigF-P~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~ 167 (281)
T 2a4a_A 89 KPKIACVINF-PYGTDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGE 167 (281)
T ss_dssp CSEEEEEEST-TTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHH
T ss_pred CceEEEEeCC-CCCCCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEeccc
Confidence 3445556777 5777888888888999999999998666666643322234 445555555555543 2456888877
Q ss_pred CCHHH-HHHHHHHHHhCCCCEEEEcCCCC-CCCCHHHHHHHHHHH
Q 018253 137 NSTRE-AIHATEQGFAVGMHAALHINPYY-GKTSLEGLISHFDSV 179 (359)
Q Consensus 137 ~st~~-ai~la~~a~~~Gadav~v~pP~y-~~~s~~~l~~yf~~I 179 (359)
.+.++ ....++.+.++|||.|=..+=|. ...+.+++.-+-+.+
T Consensus 168 L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v 212 (281)
T 2a4a_A 168 LKTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAI 212 (281)
T ss_dssp HCSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHH
Confidence 77677 45888999999999887765554 345656554444444
No 275
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=81.73 E-value=3.5 Score=36.80 Aligned_cols=136 Identities=8% Similarity=0.018 Sum_probs=74.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-e----------cCCCCHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N----------TGSNSTREAIHA 145 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-g----------vg~~st~~ai~l 145 (359)
|.+...+.++.+++.+++|+++.+...+...-..+ .++.+.+ .++||+. + |+....+.....
T Consensus 56 ~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~----~~~~~~~---~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a 128 (298)
T 3tb6_A 56 NPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIG----YYLNLEK---NGIPFAMINASYAELAAPSFTLDDVKGGMMA 128 (298)
T ss_dssp CHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHH----HHHHHHH---TTCCEEEESSCCTTCSSCEEEECHHHHHHHH
T ss_pred ChHHHHHHHHHHHHCCCCEEEEecccccccCCcHH----HHHHHHh---cCCCEEEEecCcCCCCCCEEEeCcHHHHHHH
Confidence 66778899999999999999999877654433333 2333222 2567653 2 223345567778
Q ss_pred HHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CC---eEEEeCCCCCCCCCCHHHHHHHh-cCCC--eEEEecc
Q 018253 146 TEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GP---TIIYNVPSRTGQDIPPRVIHTMA-QSPN--LAGVKEC 218 (359)
Q Consensus 146 a~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~P---iiiYn~P~~tg~~ls~e~l~~La-~~pn--ivGiK~s 218 (359)
+++..+.|...+.++...-...+.+-...|.+.+.+. .+ ..+...+......-..+.+.++. ++|. +.+|=-.
T Consensus 129 ~~~L~~~G~~~i~~i~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ai~~~ 208 (298)
T 3tb6_A 129 AEHLLSLGHTHMMGIFKADDTQGVKRMNGFIQAHRERELFPSPDMIVTFTTEEKESKLLEKVKATLEKNSKHMPTAILCY 208 (298)
T ss_dssp HHHHHHTTCCSEEEEEESSSHHHHHHHHHHHHHHHHTTCCCCGGGEEEECHHHHTTHHHHHHHHHHHHTTTSCCSEEECS
T ss_pred HHHHHHCCCCcEEEEcCCCCccHHHHHHHHHHHHHHcCCCCCcceEEEecccchhhhHHHHHHHHHhcCCCCCCeEEEEe
Confidence 8888889987665553222122233344444555544 32 12222211111110135566665 5776 7777544
Q ss_pred C
Q 018253 219 V 219 (359)
Q Consensus 219 s 219 (359)
+
T Consensus 209 ~ 209 (298)
T 3tb6_A 209 N 209 (298)
T ss_dssp S
T ss_pred C
Confidence 3
No 276
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=81.70 E-value=4.8 Score=42.30 Aligned_cols=100 Identities=14% Similarity=0.185 Sum_probs=79.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~G 153 (359)
+..|.+-+.++++.+++.|++-|.+.-|.| .+++.+-.++++.+.+.++ ++||=+++ +++..-++..+-.|.++|
T Consensus 256 ~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G---~~~P~~v~~lV~~lk~~~p-~~~I~~H~-Hnd~GlAvANslaAveAG 330 (718)
T 3bg3_A 256 TKYSLQYYMGLAEELVRAGTHILCIKDMAG---LLKPTACTMLVSSLRDRFP-DLPLHIHT-HDTSGAGVAAMLACAQAG 330 (718)
T ss_dssp CTTCHHHHHHHHHHHHHHTCSEEEEECTTS---CCCHHHHHHHHHHHHHHST-TCCEEEEC-CCTTSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCcCC---CcCHHHHHHHHHHHHHhCC-CCeEEEEE-CCCccHHHHHHHHHHHhC
Confidence 357999999999999999999999999999 5789999999999998885 56776655 567888999999999999
Q ss_pred CCEEEEcCC-CC---CCCCHHHHHHHHHH
Q 018253 154 MHAALHINP-YY---GKTSLEGLISHFDS 178 (359)
Q Consensus 154 adav~v~pP-~y---~~~s~~~l~~yf~~ 178 (359)
||.+=..-- +- ..++-++++..++.
T Consensus 331 a~~VD~ti~GlGertGN~~lE~vv~~L~~ 359 (718)
T 3bg3_A 331 ADVVDVAADSMSGMTSQPSMGALVACTRG 359 (718)
T ss_dssp CSEEEEBCGGGCSTTSCCBHHHHHHHHTT
T ss_pred CCEEEecCcccccccCchhHHHHHHHHHh
Confidence 999966543 22 23455666665543
No 277
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=81.70 E-value=17 Score=33.93 Aligned_cols=74 Identities=14% Similarity=0.011 Sum_probs=45.3
Q ss_pred HHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhh-CCCcEEEEecCC-----CCHHHHHHHHHHHHhCCCCEE
Q 018253 84 LVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF-GASVKVIGNTGS-----NSTREAIHATEQGFAVGMHAA 157 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~-~grvpViagvg~-----~st~~ai~la~~a~~~Gadav 157 (359)
-++..++.|++++-+-...|. =...+..+-+..+++.+ ...+|+|+-..- .+.+-....++.|.++|||.|
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs---~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~V 206 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGS---EYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQII 206 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTS---TTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHCCCCEEEEEEECCC---CcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEE
Confidence 456677899999887777662 23444444444555544 335888873211 233334458888889999976
Q ss_pred EEc
Q 018253 158 LHI 160 (359)
Q Consensus 158 ~v~ 160 (359)
=..
T Consensus 207 Kt~ 209 (295)
T 3glc_A 207 KTY 209 (295)
T ss_dssp EEE
T ss_pred EeC
Confidence 654
No 278
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=81.69 E-value=27 Score=33.48 Aligned_cols=153 Identities=14% Similarity=0.107 Sum_probs=100.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccC----ccC-----------cCCC---CHHHHHHHHHHHHHhhCCCcEEEEec
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGT----TGE-----------GQLM---SWDEHIMLIGHTVNCFGASVKVIGNT 134 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~Gs----tGE-----------~~~L---T~~Er~~li~~~v~~~~grvpViagv 134 (359)
+...+.+.+.+.+....+.|.+++=+-.. .|- +-+. ..++=.++++.+++.++.++++++-+
T Consensus 146 ~~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDa 225 (410)
T 2gl5_A 146 HILVTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEI 225 (410)
T ss_dssp SCCCSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 44578999999999999999999876531 131 1122 23445677888888888889999865
Q ss_pred -CCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--C
Q 018253 135 -GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--S 209 (359)
Q Consensus 135 -g~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~ 209 (359)
++.+.++++++++..++.|.+. +--|.- ..+ .+.+++|.+. .||+.=. .-.+++.++++.+ .
T Consensus 226 n~~~~~~~ai~~~~~l~~~~i~~--iE~P~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~ 292 (410)
T 2gl5_A 226 HSLLGTNSAIQFAKAIEKYRIFL--YEEPIH-PLN----SDNMQKVSRSTTIPIATGE------RSYTRWGYRELLEKQS 292 (410)
T ss_dssp TTCSCHHHHHHHHHHHGGGCEEE--EECSSC-SSC----HHHHHHHHHHCSSCEEECT------TCCTTHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHhcCCCe--EECCCC-hhh----HHHHHHHHhhCCCCEEecC------CcCCHHHHHHHHHcCC
Confidence 4568999999999999988764 444532 112 4556667665 5776643 1235678888873 5
Q ss_pred CCeEEEeccC--chh---hHhhhh-CCceEEEecC
Q 018253 210 PNLAGVKECV--GND---RVEHYT-GNGIVVWSGN 238 (359)
Q Consensus 210 pnivGiK~ss--~d~---~l~~~~-~~~~~v~~G~ 238 (359)
-+++-+|-+- +-. ++.++. .-++.++.+.
T Consensus 293 ~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 327 (410)
T 2gl5_A 293 IAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHV 327 (410)
T ss_dssp CSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCC
T ss_pred CCEEecCccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 6889999753 222 333332 3455655543
No 279
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=81.62 E-value=8.6 Score=38.26 Aligned_cols=100 Identities=11% Similarity=0.125 Sum_probs=79.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 152 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~ 152 (359)
+-.-|.+-+.++++.+.+.|++-|.+.-|+|= +++.+-.++++.+.+.+ .+|+=+++ +++..-++..+-.|.++
T Consensus 152 ~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~---~~P~~v~~lv~~l~~~~--~~~i~~H~-Hnd~GlAvAN~laAv~A 225 (464)
T 2nx9_A 152 SPVHNLQTWVDVAQQLAELGVDSIALKDMAGI---LTPYAAEELVSTLKKQV--DVELHLHC-HSTAGLADMTLLKAIEA 225 (464)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCSEEEEEETTSC---CCHHHHHHHHHHHHHHC--CSCEEEEE-CCTTSCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCC---cCHHHHHHHHHHHHHhc--CCeEEEEE-CCCCChHHHHHHHHHHh
Confidence 34569999999999999999999999999986 68999999999999887 46776655 56778889999999999
Q ss_pred CCCEEEEc-CCCC---CCCCHHHHHHHHHH
Q 018253 153 GMHAALHI-NPYY---GKTSLEGLISHFDS 178 (359)
Q Consensus 153 Gadav~v~-pP~y---~~~s~~~l~~yf~~ 178 (359)
||+.+=.. .|+- ..++-++++..++.
T Consensus 226 Ga~~VD~ti~g~gertGN~~lE~lv~~L~~ 255 (464)
T 2nx9_A 226 GVDRVDTAISSMSGTYGHPATESLVATLQG 255 (464)
T ss_dssp TCSEEEEBCGGGCSTTSCCBHHHHHHHHTT
T ss_pred CCCEEEEeccccCCCCcCHHHHHHHHHHHh
Confidence 99998554 3433 23455666666653
No 280
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=81.40 E-value=2.5 Score=36.73 Aligned_cols=89 Identities=13% Similarity=0.054 Sum_probs=54.0
Q ss_pred HHHHHHHHHCCCCEEEEc-cCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 82 DDLVNMQIVNGAEGMIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~-GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
...++...+.|++.+.+. |.+|....-+. .+.++.+.+.. +++||+++-|= +. +.++.+.++|||++++.
T Consensus 117 ~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~---~~~i~~l~~~~-~~~~i~~~gGI-~~----~~~~~~~~~Gad~vvvG 187 (211)
T 3f4w_A 117 PARVRLLEEAGADMLAVHTGTDQQAAGRKP---IDDLITMLKVR-RKARIAVAGGI-SS----QTVKDYALLGPDVVIVG 187 (211)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHHTTCCS---HHHHHHHHHHC-SSCEEEEESSC-CT----TTHHHHHTTCCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCCCcccccCCCC---HHHHHHHHHHc-CCCcEEEECCC-CH----HHHHHHHHcCCCEEEEC
Confidence 345666778899987763 33443322111 23444444444 36888875432 32 34556677899999999
Q ss_pred CCCCCCCCHHHHHHHHHHH
Q 018253 161 NPYYGKTSLEGLISHFDSV 179 (359)
Q Consensus 161 pP~y~~~s~~~l~~yf~~I 179 (359)
...+...+..+..+-+++.
T Consensus 188 sai~~~~d~~~~~~~l~~~ 206 (211)
T 3f4w_A 188 SAITHAADPAGEARKISQV 206 (211)
T ss_dssp HHHHTCSSHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHH
Confidence 8877777766655555543
No 281
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=81.39 E-value=4 Score=37.32 Aligned_cols=99 Identities=9% Similarity=0.026 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC---------CCCCCCCHHHHHHHHHHHHh
Q 018253 111 DEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN---------PYYGKTSLEGLISHFDSVLS 181 (359)
Q Consensus 111 ~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p---------P~y~~~s~~~l~~yf~~Ia~ 181 (359)
.++..-++...+ .++.-++.++.+..+ |+.++++|+|++++.- |.....+-+++..|.+.|++
T Consensus 6 ~~~~~~lr~l~~--~~~~i~~~~ayD~~s------A~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r 77 (255)
T 2qiw_A 6 KSLATKFASDHE--SGKLLVLPTVWDTWS------AGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITS 77 (255)
T ss_dssp HHHHHHHHHHHH--TCCCEECCEESSHHH------HHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHh--CCCcEEEecCcCHHH------HHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHh
Confidence 344444444332 344334556665433 4556678999998873 23334678999999999998
Q ss_pred c--CCeEEEeCCCCCCCCCCHHHHHHHhcCCCeEEEeccCc
Q 018253 182 M--GPTIIYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECVG 220 (359)
Q Consensus 182 a--~PiiiYn~P~~tg~~ls~e~l~~La~~pnivGiK~ss~ 220 (359)
. .| ++-|.|.-.|... .+++.+|.+ -.+.|+|.+.+
T Consensus 78 ~~~~p-viaD~~~Gyg~~~-~~~~~~l~~-aGa~gv~iEd~ 115 (255)
T 2qiw_A 78 AVSIP-VSVDVESGYGLSP-ADLIAQILE-AGAVGINVEDV 115 (255)
T ss_dssp HCSSC-EEEECTTCTTCCH-HHHHHHHHH-TTCCEEEECSE
T ss_pred cCCCC-EEeccCCCcCcHH-HHHHHHHHH-cCCcEEEECCC
Confidence 7 45 7889986544444 778888887 78999998776
No 282
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=81.35 E-value=28 Score=33.33 Aligned_cols=144 Identities=11% Similarity=0.066 Sum_probs=98.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEE-Eec-CCCCHHHHHHHHHHHHhCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNT-GSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVi-agv-g~~st~~ai~la~~a~~~G 153 (359)
-+.+.+.+.++.+++.|.+.+=+--.. ..++=.+.++.+.+.++.+++++ +=+ ++-+.++++++++..++.|
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~------~~~~d~~~v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~ 214 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGK------NLDADEEFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIKRLTKYD 214 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSS------CHHHHHHHHHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCC------CHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHHHHHhcC
Confidence 356888888999999999987664322 46777888889999888889998 754 4668999999999999999
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCeEEEeccC--chh---hH
Q 018253 154 MHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV--GND---RV 224 (359)
Q Consensus 154 adav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La--~~pnivGiK~ss--~d~---~l 224 (359)
.+-..+--|.- ..+ .+.+++|.+. .|| +- .-.+++.+.++. ..-.++-+|-+- |-. ++
T Consensus 215 i~~~~iEqP~~-~~d----~~~~~~l~~~~~iPI---dE-----~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 215 LGLEMIESPAP-RND----FDGLYQLRLKTDYPI---SE-----HVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp SSCCEEECCSC-TTC----HHHHHHHHHHCSSCE---EE-----ECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred CCcceecCCCC-hhh----HHHHHHHHHHcCCCc---CC-----CCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 83334445542 112 4556777765 576 32 245688888887 357899999643 222 33
Q ss_pred hhhh-CCceEEEecC
Q 018253 225 EHYT-GNGIVVWSGN 238 (359)
Q Consensus 225 ~~~~-~~~~~v~~G~ 238 (359)
.+++ .-++.++.|.
T Consensus 282 a~~A~~~gi~~~~~~ 296 (391)
T 3gd6_A 282 AYAAEVASKDVVLGT 296 (391)
T ss_dssp HHHHHHTTCEEEECC
T ss_pred HHHHHHcCCEEEecC
Confidence 3332 2456776654
No 283
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=81.34 E-value=5.6 Score=38.35 Aligned_cols=131 Identities=11% Similarity=0.039 Sum_probs=70.5
Q ss_pred EeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCC-CCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHH
Q 018253 64 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQL-MSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREA 142 (359)
Q Consensus 64 ~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~-LT~~Er~~li~~~v~~~~grvpViagvg~~st~~a 142 (359)
|.++.|++-......+.-.++.+-..+.|+--.+ ||... +...|. .=+ .+++.. ...++++.++...+.+
T Consensus 88 Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~v-----Gs~~~~le~~~~-~~~-~v~r~~-P~~~~ianig~~~~~e- 158 (365)
T 3sr7_A 88 PFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVT-----GSYSTALKNPDD-TSY-QVKKSR-PHLLLATNIGLDKPYQ- 158 (365)
T ss_dssp SEEEECC----CCCHHHHHHHHHHHHHHTCCEEC-------------------------------CCEEEEEETTSCHH-
T ss_pred ceEeccccCCCcchhHHHHHHHHHHHHcCCCeec-----ccccccccCccc-cce-EehhhC-CCCcEEEEeCCCCCHH-
Confidence 5666777654445667777777777778876432 44433 222222 111 123333 4678999887654433
Q ss_pred HHHHHHHHhCCCCEEEEcCCCC-------CCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc
Q 018253 143 IHATEQGFAVGMHAALHINPYY-------GKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ 208 (359)
Q Consensus 143 i~la~~a~~~Gadav~v~pP~y-------~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~ 208 (359)
+..+.++.+|||++.+--.++ ...+.+...+..+.|.+. .||++=.. |..++++...++.+
T Consensus 159 -~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~v----g~g~s~e~A~~l~~ 228 (365)
T 3sr7_A 159 -AGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEV----GFGMDVKTIQTAID 228 (365)
T ss_dssp -HHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEEC----SSCCCHHHHHHHHH
T ss_pred -HHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEEC----CCCCCHHHHHHHHH
Confidence 445555678999987654321 123345566677777765 69999863 45688998888874
No 284
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=81.32 E-value=27 Score=33.27 Aligned_cols=125 Identities=11% Similarity=0.050 Sum_probs=91.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Gad 155 (359)
|.+.+.+.++...+.|.+++=+-... + +.++ .++++.+++.++.++++.+-+ ++.+.++++++++..++.|++
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~-~----~~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 237 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPV-A----DDGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPW 237 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGG-C----TTCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCC-C----ChHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCC
Confidence 78889999999999999998765321 2 2456 888888888888889998865 456899999999999999988
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccCc
Q 018253 156 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECVG 220 (359)
Q Consensus 156 av~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss~ 220 (359)
.+ --|+- +. -.+.+++|.+. .||+.=. .-.+++.++++.+ .-+++.+|-+-|
T Consensus 238 ~i--EqP~~--~~---d~~~~~~l~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~G 293 (388)
T 2nql_A 238 FA--EAPVW--TE---DIAGLEKVSKNTDVPIAVGE------EWRTHWDMRARIERCRIAIVQPEMGHK 293 (388)
T ss_dssp CE--ECCSC--TT---CHHHHHHHHTSCCSCEEECT------TCCSHHHHHHHHTTSCCSEECCCHHHH
T ss_pred EE--ECCCC--hh---hHHHHHHHHhhCCCCEEEeC------CcCCHHHHHHHHHcCCCCEEEecCCCC
Confidence 54 34532 11 25566777775 5766432 2346888998874 468899997653
No 285
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=81.24 E-value=3 Score=39.15 Aligned_cols=116 Identities=17% Similarity=0.178 Sum_probs=67.7
Q ss_pred CCceEEeeecC--CCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-CccCc-CCCC-HHHHHHHH---HHHHHhhCCCcE
Q 018253 59 ALRLITAIKTP--YLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEG-QLMS-WDEHIMLI---GHTVNCFGASVK 129 (359)
Q Consensus 59 ~~Gi~~al~TP--F~~dg~-ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~-~~LT-~~Er~~li---~~~v~~~~grvp 129 (359)
..||+- +|| |.+.|+ .|.+...++++.+++.|++-|=++| ||.-+ ...+ .||..+++ +.+.+.. ++|
T Consensus 42 iMgilN--vTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~--~vp 117 (297)
T 1tx2_A 42 IMGILN--VTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV--KLP 117 (297)
T ss_dssp EEEECC--CCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred EEEEEe--CCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC--Cce
Confidence 456654 466 876665 5789999999999999999999998 43222 2233 56666666 3333332 578
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 130 VIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 130 Viagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
|.+-+.. . +-++.|.++|++-+--+.-. ... ++ -+..+++. .|+++-+.
T Consensus 118 iSIDT~~--~----~V~~aAl~aGa~iINdvsg~--~~d-~~---m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 118 ISIDTYK--A----EVAKQAIEAGAHIINDIWGA--KAE-PK---IAEVAAHYDVPIILMHN 167 (297)
T ss_dssp EEEECSC--H----HHHHHHHHHTCCEEEETTTT--SSC-TH---HHHHHHHHTCCEEEECC
T ss_pred EEEeCCC--H----HHHHHHHHcCCCEEEECCCC--CCC-HH---HHHHHHHhCCcEEEEeC
Confidence 7765543 2 22333444488766554321 111 22 23444444 68877765
No 286
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=81.16 E-value=4.5 Score=35.94 Aligned_cols=88 Identities=13% Similarity=-0.044 Sum_probs=55.3
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCc-CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEG-QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~-~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v 159 (359)
....++.+.+.|++.|.+-.-.|.+ ...+. ++++.+.+.+ ++|++++-+=.+.++ ++.+.++|||++.+
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~----~~i~~i~~~~--~ipv~v~ggI~~~~~----~~~~l~~Gad~V~l 103 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAFGTGDNR----ALIAEVAQAM--DIKVELSGGIRDDDT----LAAALATGCTRVNL 103 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHHTSCCCH----HHHHHHHHHC--SSEEEEESSCCSHHH----HHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCchhhcCCChH----HHHHHHHHhc--CCcEEEECCcCCHHH----HHHHHHcCCCEEEE
Confidence 3455677888999999987655544 23343 4555555554 689999866555543 56666789999988
Q ss_pred cCCCCCCCCHHHHHHHHHHHH
Q 018253 160 INPYYGKTSLEGLISHFDSVL 180 (359)
Q Consensus 160 ~pP~y~~~s~~~l~~yf~~Ia 180 (359)
..... .+++.+.+..+...
T Consensus 104 g~~~l--~~p~~~~~~~~~~g 122 (244)
T 1vzw_A 104 GTAAL--ETPEWVAKVIAEHG 122 (244)
T ss_dssp CHHHH--HCHHHHHHHHHHHG
T ss_pred CchHh--hCHHHHHHHHHHcC
Confidence 64322 12344444444443
No 287
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=81.02 E-value=22 Score=36.21 Aligned_cols=139 Identities=14% Similarity=0.116 Sum_probs=91.7
Q ss_pred eEEeeecCCCC----CCCCCHHHH----HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe
Q 018253 62 LITAIKTPYLP----DGRFDLEAY----DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN 133 (359)
Q Consensus 62 i~~al~TPF~~----dg~ID~~~l----~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag 133 (359)
.+...+-|+.+ .|.++++.+ +..++.|++.|||.+++= | .-+.+|-+.+++.+.+... ++|+++.
T Consensus 101 ~VAGsiGP~g~~~~~~~~~~~~e~~~~~~~qi~~l~~~gvD~l~~E-T-----~~~~~Ea~aa~~a~~~~~~-~~Pv~vS 173 (566)
T 1q7z_A 101 LVFGDIGPTGELPYPLGSTLFEEFYENFRETVEIMVEEGVDGIIFE-T-----FSDILELKAAVLAAREVSR-DVFLIAH 173 (566)
T ss_dssp EEEEEECCCSCCBTTTSSBCHHHHHHHHHHHHHHHHHTTCSEEEEE-E-----ECCHHHHHHHHHHHHHHCS-SSCEEEE
T ss_pred eEEEeCCCcccCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEe-c-----cCCHHHHHHHHHHHHHhCC-CCcEEEE
Confidence 56667777653 366777664 556677779999987742 2 2367788888877766433 6899987
Q ss_pred cC---------CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCC-------CCC
Q 018253 134 TG---------SNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPS-------RTG 195 (359)
Q Consensus 134 vg---------~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~-------~tg 195 (359)
.+ +.+.++++...+ +.|++++.+=- ...++.+..+.+.+... .|+++|=+.+ .+.
T Consensus 174 ~t~~~~g~~~~G~~~~~~~~~l~---~~~~~avG~NC----~~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~~ 246 (566)
T 1q7z_A 174 MTFDEKGRSLTGTDPANFAITFD---ELDIDALGINC----SLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTV 246 (566)
T ss_dssp ECCCTTSCCTTSCCHHHHHHHHH---TSSCSEEEEES----SSCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEEE
T ss_pred EEEcCCCeeCCCCcHHHHHHHhh---ccCCCEEEEeC----CCCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCccc
Confidence 64 235666666554 47888887632 13578899999999874 7999997632 223
Q ss_pred CCCCHHHHHHHh----c-CCCeEE
Q 018253 196 QDIPPRVIHTMA----Q-SPNLAG 214 (359)
Q Consensus 196 ~~ls~e~l~~La----~-~pnivG 214 (359)
++.+|+.+.+.+ + --+|+|
T Consensus 247 ~~~~p~~~a~~~~~~~~~G~~iiG 270 (566)
T 1q7z_A 247 YPLKPHDFAVHIDSYYELGVNIFG 270 (566)
T ss_dssp CCCCHHHHHTTHHHHHHTTCSEEC
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEc
Confidence 467788666544 2 246665
No 288
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=80.83 E-value=6.4 Score=41.40 Aligned_cols=128 Identities=11% Similarity=0.124 Sum_probs=81.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEE---cc--------CccC-cCCCCHH---HHHHHHHHHHHhhCCCcEEEEecCCCC-
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIV---GG--------TTGE-GQLMSWD---EHIMLIGHTVNCFGASVKVIGNTGSNS- 138 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v---~G--------stGE-~~~LT~~---Er~~li~~~v~~~~grvpViagvg~~s- 138 (359)
..+.+..+++||+-.+.|.+++++ .. ..+- |..++.- .-.+|++-+.+ ..|.||....+..
T Consensus 367 g~nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~s---KGV~iilw~~t~~~ 443 (738)
T 2d73_A 367 SANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAAR---KGIKMMMHHETSAS 443 (738)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHH---TTCEEEEEEECTTB
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHh---CCCEEEEEEcCCCc
Confidence 389999999999999999999999 21 2221 1111111 12345555443 4589998877665
Q ss_pred ---HHHHHH-HHHHHHhCCCCEEEEcCCCCC---CCCH----HHHHHHHHHHHhc---CCeE-EEeCC-CCCCCCCCHHH
Q 018253 139 ---TREAIH-ATEQGFAVGMHAALHINPYYG---KTSL----EGLISHFDSVLSM---GPTI-IYNVP-SRTGQDIPPRV 202 (359)
Q Consensus 139 ---t~~ai~-la~~a~~~Gadav~v~pP~y~---~~s~----~~l~~yf~~Ia~a---~Pii-iYn~P-~~tg~~ls~e~ 202 (359)
.++..+ ..+..++.|+.+|=+- |+. .-+. +..+.||..|++. --++ -++-+ .-||
T Consensus 444 ~~n~e~~~d~~f~~~~~~Gv~GVKvd--F~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfHg~~kPtG------- 514 (738)
T 2d73_A 444 VRNYERHMDKAYQFMADNGYNSVKSG--YVGNIIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAHEATRPTG------- 514 (738)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEE--CCSSCBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEETTSCCCCS-------
T ss_pred hhhHHHHHHHHHHHHHHcCCCEEEeC--ccccCcCCcccccchHHHHHHHHHHHHHHHcCcEEEccCCcCCCc-------
Confidence 555544 7778899999999886 331 2233 6788999999864 2443 33322 1234
Q ss_pred HHHHh-cCCCeEEEec
Q 018253 203 IHTMA-QSPNLAGVKE 217 (359)
Q Consensus 203 l~~La-~~pnivGiK~ 217 (359)
|. ..||+++---
T Consensus 515 ---l~RTYPN~~t~Eg 527 (738)
T 2d73_A 515 ---ICRTYPNLIGNES 527 (738)
T ss_dssp ---GGGTCTTEEEECC
T ss_pred ---ccccCcchHHHhh
Confidence 34 4799886543
No 289
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=80.74 E-value=27 Score=30.17 Aligned_cols=186 Identities=9% Similarity=-0.015 Sum_probs=97.4
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecC----
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG---- 135 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg---- 135 (359)
.|+++..-. +..+.--|.+...++++.+.+.|++++.+. +. +.++.+.+.+ ++|++...-
T Consensus 5 ~~~~~~~q~-~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~---------~~----~~i~~i~~~~--~~pv~~~~~~~~~ 68 (223)
T 1y0e_A 5 HGLIVSCQA-LPDEPLHSSFIMSKMALAAYEGGAVGIRAN---------TK----EDILAIKETV--DLPVIGIVKRDYD 68 (223)
T ss_dssp SEEEEECCC-CTTSTTCCHHHHHHHHHHHHHHTCSEEEEE---------SH----HHHHHHHHHC--CSCEEEECBCCCT
T ss_pred CCeEEEecC-CCCCCCCCCccHHHHHHHHHHCCCeeeccC---------CH----HHHHHHHHhc--CCCEEeeeccCCC
Confidence 455555443 443334477889999999999999999764 22 3466666655 468753111
Q ss_pred --CCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCC--CHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhcC-C
Q 018253 136 --SNSTREAIHATEQGFAVGMHAALHINPYYGKT--SLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQS-P 210 (359)
Q Consensus 136 --~~st~~ai~la~~a~~~Gadav~v~pP~y~~~--s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~La~~-p 210 (359)
..-.....+.++.+.++|+|.+.+..=....+ +..++++..++.....+++ .+. .+++...++.+. -
T Consensus 69 ~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~-~~~-------~t~~e~~~~~~~G~ 140 (223)
T 1y0e_A 69 HSDVFITATSKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIM-ADI-------ATVEEAKNAARLGF 140 (223)
T ss_dssp TCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEE-EEC-------SSHHHHHHHHHTTC
T ss_pred ccccccCCcHHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEE-ecC-------CCHHHHHHHHHcCC
Confidence 01001123445667789999998764333233 3344444444432122333 332 246556555432 2
Q ss_pred CeEEEe---------cc--Cc-hh-hHhhhhC-CceEEE--ecC-CchhhhhhhhcCCceeecccccccHHHHHHH
Q 018253 211 NLAGVK---------EC--VG-ND-RVEHYTG-NGIVVW--SGN-DDQCHDARWNHGATGVISVTSNLVPGMMREL 269 (359)
Q Consensus 211 nivGiK---------~s--s~-d~-~l~~~~~-~~~~v~--~G~-d~~~~~~~l~~Ga~G~is~~an~~P~l~~~l 269 (359)
..+++= +. .+ +. .+.+... -++.++ .|- +..-+...+..|++|++.|.+-+-|+...+.
T Consensus 141 d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~vG~al~~p~~~~~~ 216 (223)
T 1y0e_A 141 DYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAITRPKEITKR 216 (223)
T ss_dssp SEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHCHHHHHHH
T ss_pred CEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEEEChHHcCcHHHHHH
Confidence 333321 11 11 11 1222211 133443 354 3333445578899999999876667655443
No 290
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=80.73 E-value=3.7 Score=38.72 Aligned_cols=72 Identities=22% Similarity=0.298 Sum_probs=45.3
Q ss_pred HHHHHHHCCCCEEEEccC-----ccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEE
Q 018253 84 LVNMQIVNGAEGMIVGGT-----TGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 158 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~Gs-----tGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~ 158 (359)
.++.+.+.|+|+|.+-|. +|+. .+ ..++..+++.+ ++|||+.=|=.+.+++.+ +.++|||+|+
T Consensus 122 ~a~~~~~~GaD~i~v~g~~~GG~~g~~--~~----~~ll~~i~~~~--~iPViaaGGI~~~~~~~~----al~~GAdgV~ 189 (332)
T 2z6i_A 122 LAKRMEKIGADAVIAEGMEAGGHIGKL--TT----MTLVRQVATAI--SIPVIAAGGIADGEGAAA----GFMLGAEAVQ 189 (332)
T ss_dssp HHHHHHHTTCSCEEEECTTSSEECCSS--CH----HHHHHHHHHHC--SSCEEEESSCCSHHHHHH----HHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCCCc--cH----HHHHHHHHHhc--CCCEEEECCCCCHHHHHH----HHHcCCCEEE
Confidence 456677899999999543 3422 12 24555555555 589987433333544433 3348999999
Q ss_pred EcCCCCCCC
Q 018253 159 HINPYYGKT 167 (359)
Q Consensus 159 v~pP~y~~~ 167 (359)
+..+++..+
T Consensus 190 vGs~~l~~~ 198 (332)
T 2z6i_A 190 VGTRFVVAK 198 (332)
T ss_dssp ECHHHHTBT
T ss_pred ecHHHhcCc
Confidence 998877543
No 291
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=80.67 E-value=9.4 Score=36.07 Aligned_cols=114 Identities=9% Similarity=0.019 Sum_probs=81.9
Q ss_pred EeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccC-cc-----C--cCCCCHHHHHHHHHHHHHhhCCCcEEEEec-
Q 018253 64 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGT-TG-----E--GQLMSWDEHIMLIGHTVNCFGASVKVIGNT- 134 (359)
Q Consensus 64 ~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~Gs-tG-----E--~~~LT~~Er~~li~~~v~~~~grvpViagv- 134 (359)
..++|.+| ....++++ +.|++.|++.|+ .+ - .-.+|.+|....++.+.+.+. ++||++-.
T Consensus 41 i~~~~ayD-------~~sA~i~e---~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~-~~PviaD~d 109 (318)
T 1zlp_A 41 VLMPGVQD-------ALSAAVVE---KTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP-NLCVVVDGD 109 (318)
T ss_dssp EEEEEECS-------HHHHHHHH---HTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS-SSEEEEECT
T ss_pred EEEecCCC-------HHHHHHHH---HcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc-CCCEEEeCC
Confidence 35678876 33444544 589999999983 44 2 246899999999999888764 68999943
Q ss_pred -CCCCHHHHHHHHHHHHhCCCCEEEEcCCC----C---C---CCCHHHHHHHHHHHHhc---CCeEEE
Q 018253 135 -GSNSTREAIHATEQGFAVGMHAALHINPY----Y---G---KTSLEGLISHFDSVLSM---GPTIIY 188 (359)
Q Consensus 135 -g~~st~~ai~la~~a~~~Gadav~v~pP~----y---~---~~s~~~l~~yf~~Ia~a---~PiiiY 188 (359)
|-.+..++.+.++...++||++|-+---. . . -.++++..+-.+++.++ .+++|.
T Consensus 110 ~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ 177 (318)
T 1zlp_A 110 TGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLV 177 (318)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEE
Confidence 32389999999999999999999875432 1 1 14677777777777765 355554
No 292
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=80.57 E-value=9.9 Score=36.18 Aligned_cols=107 Identities=12% Similarity=0.092 Sum_probs=66.4
Q ss_pred HHHHHHHHHCCCCE-EEEccCccCcCCCCHHHHHHHH-------HHHHHhhCCCcEEEEecCCCCHHHHHHHHHHH-HhC
Q 018253 82 DDLVNMQIVNGAEG-MIVGGTTGEGQLMSWDEHIMLI-------GHTVNCFGASVKVIGNTGSNSTREAIHATEQG-FAV 152 (359)
Q Consensus 82 ~~li~~li~~Gv~G-l~v~GstGE~~~LT~~Er~~li-------~~~v~~~~grvpViagvg~~st~~ai~la~~a-~~~ 152 (359)
+..++.+-+.||+. |+..++.+ ...+..++..++. ..+++..++|.--++.+.-...+++++..+++ .+.
T Consensus 76 ~~rl~~MD~~GI~~~Vls~~~~~-~~~~~~~~a~~~~r~~Nd~l~~~~~~~P~Rf~g~a~v~~~~~~~a~~El~r~~~~~ 154 (357)
T 3nur_A 76 DERIQFMNNQDVQIQVLSYGNGS-PSNLVGQKAIELCQKANDQLANYIAQYPNRFVGFATLPINEPEAAAREFERCINDL 154 (357)
T ss_dssp HHHHHHHHHTTEEEEEEEECTTC-GGGSCHHHHHHHHHHHHHHHHHHHHHSTTTEEECBCCCTTSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCcEEEEeCCCCc-cccCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEeCCCCCHHHHHHHHHHHHhhc
Confidence 45566666889986 55555544 2233444433322 22233345664334444333567788888886 579
Q ss_pred CCCEEEEcCCCC-CCCCHHHHHHHHHHHHhc-CCeEEEe
Q 018253 153 GMHAALHINPYY-GKTSLEGLISHFDSVLSM-GPTIIYN 189 (359)
Q Consensus 153 Gadav~v~pP~y-~~~s~~~l~~yf~~Ia~a-~PiiiYn 189 (359)
|+.++.+.+.+- ...+.+.+...|+.+.+. .||+++-
T Consensus 155 G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV~iH~ 193 (357)
T 3nur_A 155 GFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHP 193 (357)
T ss_dssp CCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCEEEEC
T ss_pred CceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeEEEec
Confidence 999998875432 234567788899988887 7999884
No 293
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=80.49 E-value=10 Score=33.92 Aligned_cols=103 Identities=13% Similarity=0.085 Sum_probs=61.0
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
+.++.+++.|++.+++..+...-+ ++-.++++.+.+. .+++++.+.+ .+.++.+.++|+|.+.+..-
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~p----~~l~~~i~~~~~~---g~~v~~~v~t------~eea~~a~~~Gad~Ig~~~~ 158 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTARQRP----VAVEALLARIHHH---HLLTMADCSS------VDDGLACQRLGADIIGTTMS 158 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCS----SCHHHHHHHHHHT---TCEEEEECCS------HHHHHHHHHTTCSEEECTTT
T ss_pred HHHHHHHHcCCCEEEECccccCCH----HHHHHHHHHHHHC---CCEEEEeCCC------HHHHHHHHhCCCCEEEEcCc
Confidence 346667899999988766654433 3444555555442 5788887753 45667888999998865322
Q ss_pred CCC------CCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCC-CHHHHHHHhcC
Q 018253 163 YYG------KTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDI-PPRVIHTMAQS 209 (359)
Q Consensus 163 ~y~------~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~l-s~e~l~~La~~ 209 (359)
-|. .++ .+.++++.+. .|++-- . .+ +++.+.++.+.
T Consensus 159 g~t~~~~~~~~~----~~~i~~l~~~~ipvIA~-----G--GI~t~~d~~~~~~~ 202 (232)
T 3igs_A 159 GYTTPDTPEEPD----LPLVKALHDAGCRVIAE-----G--RYNSPALAAEAIRY 202 (232)
T ss_dssp TSSSSSCCSSCC----HHHHHHHHHTTCCEEEE-----S--CCCSHHHHHHHHHT
T ss_pred cCCCCCCCCCCC----HHHHHHHHhcCCcEEEE-----C--CCCCHHHHHHHHHc
Confidence 121 122 2344445543 565522 2 34 57777777653
No 294
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=80.46 E-value=39 Score=32.23 Aligned_cols=143 Identities=13% Similarity=0.094 Sum_probs=94.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
.+.+.+.+.+...++.|.+++=+-...+ +.++-.+.++.+++.++.++++.+-+ ++.+.++++++++..++.|.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~-----~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~ 218 (389)
T 2oz8_A 144 LDDDAFVSLFSHAASIGYSAFKIKVGHR-----DFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGH 218 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCS-----SHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEccCCC-----CHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 5788899999999999999987654322 34556778888888887789998865 45689999999999999443
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhcC---CeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccCchh---hHhh
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECVGND---RVEH 226 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a~---PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss~d~---~l~~ 226 (359)
+-.++--|.- ..+ .+.+++|.+.. ||+.= +.- +++.+.++.+ .-+++-+| ++=. ++.+
T Consensus 219 ~i~~iEqP~~-~~~----~~~~~~l~~~~~~iPIa~d------E~~-~~~~~~~~i~~~~~d~v~ik--GGit~a~~i~~ 284 (389)
T 2oz8_A 219 DLLWVEDPIL-RHD----HDGLRTLRHAVTWTQINSG------EYL-DLQGKRLLLEAHAADILNVH--GQVTDVMRIGW 284 (389)
T ss_dssp CCSEEESCBC-TTC----HHHHHHHHHHCCSSEEEEC------TTC-CHHHHHHHHHTTCCSEEEEC--SCHHHHHHHHH
T ss_pred CceEEeCCCC-CcC----HHHHHHHHhhCCCCCEEeC------CCC-CHHHHHHHHHcCCCCEEEEC--cCHHHHHHHHH
Confidence 3334555542 112 44556666643 44432 223 8888888863 56899999 4332 3333
Q ss_pred hh-CCceEEEec
Q 018253 227 YT-GNGIVVWSG 237 (359)
Q Consensus 227 ~~-~~~~~v~~G 237 (359)
+. .-++.++.|
T Consensus 285 ~A~~~gi~~~~~ 296 (389)
T 2oz8_A 285 LAAELGIPISIG 296 (389)
T ss_dssp HHHHHTCCEEEC
T ss_pred HHHHcCCeEeec
Confidence 32 234556666
No 295
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=80.18 E-value=4.9 Score=38.28 Aligned_cols=89 Identities=11% Similarity=0.019 Sum_probs=58.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEc-cCccCcCCCC--HHHHHHHHHHHHHhhCCCcEEEEecCCC-CHHHHHHHHHH
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVG-GTTGEGQLMS--WDEHIMLIGHTVNCFGASVKVIGNTGSN-STREAIHATEQ 148 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~-GstGE~~~LT--~~Er~~li~~~v~~~~grvpViagvg~~-st~~ai~la~~ 148 (359)
++..+.+....+++.|.+.|++.|-+- |.+.+..... ......+++.+.+.+ ++|||++ |.. +.+++ +.
T Consensus 233 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~-Ggi~t~e~a----~~ 305 (349)
T 3hgj_A 233 EGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV--GLRTGAV-GLITTPEQA----ET 305 (349)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH--CCEEEEC-SSCCCHHHH----HH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc--CceEEEE-CCCCCHHHH----HH
Confidence 356888899999999999999998876 4332211111 112344566666655 5798864 543 45444 34
Q ss_pred HHhCC-CCEEEEcCCCCCCCC
Q 018253 149 GFAVG-MHAALHINPYYGKTS 168 (359)
Q Consensus 149 a~~~G-adav~v~pP~y~~~s 168 (359)
+.+.| +|.|++.-++...|+
T Consensus 306 ~l~~G~aD~V~iGR~~lanPd 326 (349)
T 3hgj_A 306 LLQAGSADLVLLGRVLLRDPY 326 (349)
T ss_dssp HHHTTSCSEEEESTHHHHCTT
T ss_pred HHHCCCceEEEecHHHHhCch
Confidence 45577 999999988776554
No 296
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=80.01 E-value=8 Score=34.87 Aligned_cols=55 Identities=13% Similarity=0.146 Sum_probs=42.3
Q ss_pred ecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC------------------CCHHHHHHHHHHHHhc--CCeEE
Q 018253 133 NTGSNSTREAIHATEQGFAVGMHAALHINPYYGK------------------TSLEGLISHFDSVLSM--GPTII 187 (359)
Q Consensus 133 gvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~------------------~s~~~l~~yf~~Ia~a--~Piii 187 (359)
-.+..+.++.++.++.+.+.|+|.+-+-.|+--+ .+.+...+..+++.+. .|+++
T Consensus 25 ~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~ 99 (262)
T 1rd5_A 25 TAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVL 99 (262)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEE
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 3567778999999999999999999998887521 2456666777777665 69876
No 297
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=79.97 E-value=40 Score=31.63 Aligned_cols=126 Identities=10% Similarity=0.020 Sum_probs=91.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
-|.+.+.+.+....+.|.+++=+-...+ +.++=.++++.+++.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-----~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i 217 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYP-----ALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGV 217 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCS-----SHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC-----CHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 4677888888899999999987754322 44666788888888888889998865 45689999999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 219 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss 219 (359)
+.+ --|+- +. -.+.+++|.+. .||+.=. .-.+++.+.++.+ .-+++-+|-+-
T Consensus 218 ~~i--E~P~~--~~---~~~~~~~l~~~~~iPI~~de------~~~~~~~~~~~i~~~~~d~v~ik~~~ 273 (359)
T 1mdl_A 218 TWI--EEPTL--QH---DYEGHQRIQSKLNVPVQMGE------NWLGPEEMFKALSIGACRLAMPDAMK 273 (359)
T ss_dssp SCE--ECCSC--TT---CHHHHHHHHHTCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCBTTT
T ss_pred CeE--ECCCC--hh---hHHHHHHHHHhCCCCEEeCC------CCCCHHHHHHHHHcCCCCEEeecchh
Confidence 854 34531 11 14556667665 5766432 2356888888863 46888899754
No 298
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=79.89 E-value=5.7 Score=37.23 Aligned_cols=113 Identities=10% Similarity=0.117 Sum_probs=78.8
Q ss_pred EeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-C-----ccCc--CCCCHHHHHHHHHHHHHhhCCCcEEEEe--
Q 018253 64 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-T-----TGEG--QLMSWDEHIMLIGHTVNCFGASVKVIGN-- 133 (359)
Q Consensus 64 ~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-s-----tGE~--~~LT~~Er~~li~~~v~~~~grvpViag-- 133 (359)
..++|.+| ....++++ +.|++.+++.| + -|-- -.+|.+|....++.+.+.+ ++||++-
T Consensus 24 i~~~~a~D-------~~sA~l~e---~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~--~~PviaD~d 91 (298)
T 3eoo_A 24 LQVVGAIT-------AYAAKMAE---AVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT--NLPLLVDID 91 (298)
T ss_dssp EEEEECSS-------HHHHHHHH---HHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC--CSCEEEECT
T ss_pred EEEecCCC-------HHHHHHHH---HcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc--CCeEEEECC
Confidence 34677776 33444544 56999999998 3 3432 3579999999999888866 4799983
Q ss_pred cCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCC--------C--CCHHHHHHHHHHHHhc---CCeEEE
Q 018253 134 TGSNSTREAIHATEQGFAVGMHAALHINPYYG--------K--TSLEGLISHFDSVLSM---GPTIIY 188 (359)
Q Consensus 134 vg~~st~~ai~la~~a~~~Gadav~v~pP~y~--------~--~s~~~l~~yf~~Ia~a---~PiiiY 188 (359)
.|..+..++.+.++...++|+++|-+---... + .+.++.++-.++..++ .+++|-
T Consensus 92 ~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ 159 (298)
T 3eoo_A 92 TGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIM 159 (298)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEE
Confidence 34347889999999999999999987653321 1 3667777777766655 355443
No 299
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=79.82 E-value=2.8 Score=39.36 Aligned_cols=77 Identities=17% Similarity=0.153 Sum_probs=44.9
Q ss_pred HHHHHHCCCCEEEEccCccCcCCCC-HHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCC
Q 018253 85 VNMQIVNGAEGMIVGGTTGEGQLMS-WDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPY 163 (359)
Q Consensus 85 i~~li~~Gv~Gl~v~GstGE~~~LT-~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~ 163 (359)
+....+.|+|+|.+-|.++.++.=+ ..--.+++..+++.+ ++||++.=|=.+.+++.+.. ++|||+|++...+
T Consensus 131 a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~~~~v~~al----~~GAdgV~vGs~~ 204 (328)
T 2gjl_A 131 ALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFADGRGLVAAL----ALGADAINMGTRF 204 (328)
T ss_dssp HHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHH----HHTCSEEEESHHH
T ss_pred HHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHH----HcCCCEEEECHHH
Confidence 4457789999999855432222100 001124455555443 68998754433445543333 3699999999887
Q ss_pred CCCC
Q 018253 164 YGKT 167 (359)
Q Consensus 164 y~~~ 167 (359)
+..+
T Consensus 205 ~~~~ 208 (328)
T 2gjl_A 205 LATR 208 (328)
T ss_dssp HTSS
T ss_pred HcCc
Confidence 7654
No 300
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=79.60 E-value=12 Score=37.58 Aligned_cols=76 Identities=17% Similarity=0.229 Sum_probs=45.0
Q ss_pred HHHHHHCCCCEEEEccCccCcCCCCHHH-------HHHHHHHHHHhhC-CCcEEEEecCCCCHHHHHHHHHHHHhCCCCE
Q 018253 85 VNMQIVNGAEGMIVGGTTGEGQLMSWDE-------HIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVGMHA 156 (359)
Q Consensus 85 i~~li~~Gv~Gl~v~GstGE~~~LT~~E-------r~~li~~~v~~~~-grvpViagvg~~st~~ai~la~~a~~~Gada 156 (359)
.+.+++.|+++|.+....|. ..+..+ ....+..+.+.+. -++|||+.=|-.+..+..+ |.++|||+
T Consensus 311 a~~~~~aGad~i~vg~g~gs--i~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~k----ala~GA~~ 384 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGS--ICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVK----ALAAGAHV 384 (511)
T ss_dssp HHHHHHHTCSEEEECSSCST--TCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHH----HHHTTCSE
T ss_pred HHHHHHhCCCEEEECCCCcc--ccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHH----HHHhCchh
Confidence 45677889999998443333 222221 1223333333332 2699999544445555544 35589999
Q ss_pred EEEcCCCCCC
Q 018253 157 ALHINPYYGK 166 (359)
Q Consensus 157 v~v~pP~y~~ 166 (359)
|++-.++...
T Consensus 385 V~vGs~~~~~ 394 (511)
T 3usb_A 385 VMLGSMFAGV 394 (511)
T ss_dssp EEESTTTTTB
T ss_pred heecHHHhcC
Confidence 9999876643
No 301
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=79.52 E-value=38 Score=31.94 Aligned_cols=144 Identities=13% Similarity=0.070 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHH-CCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 77 DLEAYDDLVNMQIV-NGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 77 D~~~l~~li~~li~-~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
|.+.+.+.+...++ .|.+++=+-...+ +.++-.+.++.+++.++.++++.+-+ ++.+.++++++++..++.|.
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~-----~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i 216 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGAR-----TPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGV 216 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSS-----CHHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCC-----ChHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCc
Confidence 56788888888888 9999987654332 34556778888888887788888865 45689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC--chh---hHh
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RVE 225 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss--~d~---~l~ 225 (359)
+. +--|.- ..+ .+.++++.+. .||+.=. .-.+++.+.++.+ .-+++-+|-+- +-. ++.
T Consensus 217 ~~--iEqP~~-~~~----~~~~~~l~~~~~ipIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 283 (370)
T 1nu5_A 217 EL--VEQPVP-RAN----FGALRRLTEQNGVAILADE------SLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVA 283 (370)
T ss_dssp CE--EECCSC-TTC----HHHHHHHHHHCSSEEEEST------TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHH
T ss_pred ce--EeCCCC-ccc----HHHHHHHHHhCCCCEEeCC------CCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHH
Confidence 75 344531 112 4455666665 4665432 2356788888874 47899999653 222 333
Q ss_pred hhh-CCceEEEecC
Q 018253 226 HYT-GNGIVVWSGN 238 (359)
Q Consensus 226 ~~~-~~~~~v~~G~ 238 (359)
++. ..++.++.|+
T Consensus 284 ~~A~~~g~~~~~~~ 297 (370)
T 1nu5_A 284 AVAEAAGISSYGGT 297 (370)
T ss_dssp HHHHHHTCEEEECC
T ss_pred HHHHHcCCcEEecC
Confidence 322 2356666554
No 302
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=79.48 E-value=7.2 Score=36.03 Aligned_cols=113 Identities=13% Similarity=0.146 Sum_probs=82.6
Q ss_pred EeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-Cc----cCc--CCCCHHHHHHHHHHHHHhhCCCcEEEEec--
Q 018253 64 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TT----GEG--QLMSWDEHIMLIGHTVNCFGASVKVIGNT-- 134 (359)
Q Consensus 64 ~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-st----GE~--~~LT~~Er~~li~~~v~~~~grvpViagv-- 134 (359)
..++|.+| ....++++ +.|++.+++.| +. |-- -.+|.+|....++.+.+.+. +||++=.
T Consensus 18 i~~~~a~D-------~~sA~~~~---~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~--~pviaD~d~ 85 (275)
T 2ze3_A 18 FLLPNAWD-------VASARLLE---AAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVA--IPVNADIEA 85 (275)
T ss_dssp EEECEESS-------HHHHHHHH---HHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCS--SCEEEECTT
T ss_pred eeEecccC-------HHHHHHHH---HcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcC--CCEEeecCC
Confidence 45677776 34455555 46999999996 23 322 26899999999999988775 7999943
Q ss_pred C-CCCHHHHHHHHHHHHhCCCCEEEEcCCCC--CC--CCHHHHHHHHHHHHhc-----CCeEEE
Q 018253 135 G-SNSTREAIHATEQGFAVGMHAALHINPYY--GK--TSLEGLISHFDSVLSM-----GPTIIY 188 (359)
Q Consensus 135 g-~~st~~ai~la~~a~~~Gadav~v~pP~y--~~--~s~~~l~~yf~~Ia~a-----~PiiiY 188 (359)
| +.+..++.+.++...++|++++-+---.. .+ .+.++..+-.+.+.++ .|++|.
T Consensus 86 Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~ 149 (275)
T 2ze3_A 86 GYGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLN 149 (275)
T ss_dssp CSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEE
Confidence 2 34789999999999999999998864332 11 3677888888888765 587665
No 303
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=79.31 E-value=7 Score=34.58 Aligned_cols=104 Identities=15% Similarity=0.145 Sum_probs=59.1
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
..++..++.|++++...++. ..+++...+ . .++++.|+. +..| ++.|.+.|+|.+.+.|
T Consensus 79 d~~~~A~~aGAd~v~~p~~d-----------~~v~~~~~~-~--g~~~i~G~~--t~~e----~~~A~~~Gad~v~~Fp- 137 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPGLT-----------EPLLKAATE-G--TIPLIPGIS--TVSE----LMLGMDYGLKEFKFFP- 137 (214)
T ss_dssp HHHHHHHHHTCSCEEESSCC-----------HHHHHHHHH-S--SSCEEEEES--SHHH----HHHHHHTTCCEEEETT-
T ss_pred HHHHHHHHcCCCEEEcCCCC-----------HHHHHHHHH-h--CCCEEEecC--CHHH----HHHHHHCCCCEEEEec-
Confidence 45667778899998755432 234444433 2 368888854 3444 4667789999999833
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeEEEeCCC-CCCCCCCHHHHHHHhcCCCeEEEe
Q 018253 163 YYGKTSLEGLISHFDSVLSMGPTIIYNVPS-RTGQDIPPRVIHTMAQSPNLAGVK 216 (359)
Q Consensus 163 ~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~-~tg~~ls~e~l~~La~~pnivGiK 216 (359)
...-+=.+|++++....| +.|- .+| .++++.+.++.+.+++.|+=
T Consensus 138 ----a~~~gG~~~lk~i~~~~~----~ipvvaiG-GI~~~n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 138 ----AEANGGVKALQAIAGPFS----QVRFCPTG-GISPANYRDYLALKSVLCIG 183 (214)
T ss_dssp ----TTTTTHHHHHHHHHTTCT----TCEEEEBS-SCCTTTHHHHHTSTTBSCEE
T ss_pred ----CccccCHHHHHHHhhhCC----CCeEEEEC-CCCHHHHHHHHhcCCCeEEE
Confidence 111111566777766543 1111 133 35566777776665544443
No 304
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=79.28 E-value=10 Score=33.87 Aligned_cols=160 Identities=14% Similarity=0.126 Sum_probs=101.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCC-CcEEEEecC----CCCHHHHHHHHHHHHh
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTG----SNSTREAIHATEQGFA 151 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~g-rvpViagvg----~~st~~ai~la~~a~~ 151 (359)
..+.++++++...+.|++++++.-+ .++.+.+...+ +++|-..++ ..+++.-+.-++.|.+
T Consensus 17 t~~~i~~l~~~a~~~~~~aVcv~p~--------------~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~ 82 (220)
T 1ub3_A 17 TLEEVAKAAEEALEYGFYGLCIPPS--------------YVAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACA 82 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCGG--------------GHHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECHH--------------HHHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHH
Confidence 5788999999999999999997653 23344444444 566644443 3678878899999999
Q ss_pred CCCCEEEEcCCCCC--CCCHHHHHHHHHHHHhcC-----CeEEEeCCCCCCCCCCHHHHHHHhc---CCCeEEEeccCc-
Q 018253 152 VGMHAALHINPYYG--KTSLEGLISHFDSVLSMG-----PTIIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGVKECVG- 220 (359)
Q Consensus 152 ~Gadav~v~pP~y~--~~s~~~l~~yf~~Ia~a~-----PiiiYn~P~~tg~~ls~e~l~~La~---~pnivGiK~ss~- 220 (359)
.|||.+-++.++-. ....+.+.+-..+|.++. |+| +. ++. ++++.+.+.++ .-..--||-+.|
T Consensus 83 ~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvI-le----t~~-l~~e~i~~a~~ia~eaGADfVKTsTGf 156 (220)
T 1ub3_A 83 RGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVI-LE----TGY-FSPEEIARLAEAAIRGGADFLKTSTGF 156 (220)
T ss_dssp TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEE-CC----GGG-SCHHHHHHHHHHHHHHTCSEEECCCSS
T ss_pred cCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEE-Ee----cCC-CCHHHHHHHHHHHHHhCCCEEEeCCCC
Confidence 99999977665432 346788888888888752 333 33 232 67877766553 234555898742
Q ss_pred --------hhh-HhhhhCCceE--EEecCC--chhhhhhhhcCCc--eeecc
Q 018253 221 --------NDR-VEHYTGNGIV--VWSGND--DQCHDARWNHGAT--GVISV 257 (359)
Q Consensus 221 --------d~~-l~~~~~~~~~--v~~G~d--~~~~~~~l~~Ga~--G~is~ 257 (359)
|.+ +++..+.++. .-.|-- +.++ .++.+|++ |.-++
T Consensus 157 ~~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al-~~i~aGa~RiG~S~g 207 (220)
T 1ub3_A 157 GPRGASLEDVALLVRVAQGRAQVKAAGGIRDRETAL-RMLKAGASRLGTSSG 207 (220)
T ss_dssp SSCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHH-HHHHTTCSEEEETTH
T ss_pred CCCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHH-HHHHCCCcccchhHH
Confidence 223 3333344443 333332 2233 35678998 77554
No 305
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=79.11 E-value=15 Score=36.88 Aligned_cols=73 Identities=15% Similarity=0.175 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccC-----------------------------c------------CCCCHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGE-----------------------------G------------QLMSWDEHIM 115 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE-----------------------------~------------~~LT~~Er~~ 115 (359)
|.+.+.+++++..+.|+++|++.-.+.- + ..+++ +
T Consensus 258 d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~----~ 333 (511)
T 1kbi_A 258 DRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTW----K 333 (511)
T ss_dssp SHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCH----H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHH----H
Confidence 5677888888888899998765443211 0 12333 3
Q ss_pred HHHHHHHhhCCCcEEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 116 LIGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 116 li~~~v~~~~grvpVia-gvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
.++.+++.+ ++||++ |+.+ .+.++.+.++|+|++.+..
T Consensus 334 ~i~~lr~~~--~~PvivKgv~~------~e~A~~a~~aGad~I~vs~ 372 (511)
T 1kbi_A 334 DIEELKKKT--KLPIVIKGVQR------TEDVIKAAEIGVSGVVLSN 372 (511)
T ss_dssp HHHHHHHHC--SSCEEEEEECS------HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHh--CCcEEEEeCCC------HHHHHHHHHcCCCEEEEcC
Confidence 366666665 579888 5553 4568889999999999964
No 306
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=79.00 E-value=9.6 Score=36.48 Aligned_cols=93 Identities=13% Similarity=0.193 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHH----HHHHHHHHHhc---------CCeEEEeCCCCCCCCCCHHHHHH
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEG----LISHFDSVLSM---------GPTIIYNVPSRTGQDIPPRVIHT 205 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~----l~~yf~~Ia~a---------~PiiiYn~P~~tg~~ls~e~l~~ 205 (359)
++..+++++...++|||++.+..+.-.-.|++. +.-|+++|.+. .|++++.. |. ...+..
T Consensus 196 ~~~~~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~----g~---~~~l~~ 268 (368)
T 4exq_A 196 AQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTK----GG---GLWLED 268 (368)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEET----TC---GGGHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcC----Cc---HHHHHH
Confidence 334556666667889999988766543344433 66677777764 25554432 21 135666
Q ss_pred HhcC-CCeEEEeccCchh-hHhhhhCCceEEEecCC
Q 018253 206 MAQS-PNLAGVKECVGND-RVEHYTGNGIVVWSGND 239 (359)
Q Consensus 206 La~~-pnivGiK~ss~d~-~l~~~~~~~~~v~~G~d 239 (359)
+++. .+++++ +...|. ..++..++++.+..+.|
T Consensus 269 l~~~g~d~i~~-d~~~dl~~ak~~~g~~~~l~Gnld 303 (368)
T 4exq_A 269 LAATGVDAVGL-DWTVNLGRARERVAGRVALQGNLD 303 (368)
T ss_dssp HHTSSCSEEEC-CTTSCHHHHHHHHTTSSEEEEEEC
T ss_pred HHHhCCCEEee-CCCCCHHHHHHHhCCCEEEEECCC
Confidence 6664 467776 333342 34444455555444443
No 307
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=78.94 E-value=13 Score=33.00 Aligned_cols=18 Identities=17% Similarity=0.436 Sum_probs=10.8
Q ss_pred HHHHHHHHHCCCCEEEEc
Q 018253 82 DDLVNMQIVNGAEGMIVG 99 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~ 99 (359)
.+.++.+.+.|++++.+.
T Consensus 98 ~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVV 115 (248)
T ss_dssp HHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHCCCCEEEEC
Confidence 455666666666666654
No 308
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=78.80 E-value=18 Score=34.68 Aligned_cols=145 Identities=8% Similarity=-0.035 Sum_probs=100.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCC
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~G 153 (359)
.-+.+.+.+.++.+++.|.+.+=+--.. +.++=.+.++.+++.++.++++++-+ ++.+.++++++++..++.|
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~------~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~ 222 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGR------APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAG 222 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCS------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCC------CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcC
Confidence 3567889999999999999988764321 67888889999999998899999865 4668999999999999999
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHH-hc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC--chh---h
Q 018253 154 MHAALHINPYYGKTSLEGLISHFDSVL-SM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---R 223 (359)
Q Consensus 154 adav~v~pP~y~~~s~~~l~~yf~~Ia-~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss--~d~---~ 223 (359)
++.+= -|.- ..+ .+.+++|. +. .||+.=. .-.+++.+.++.+ .-.++-+|-+- |-. +
T Consensus 223 i~~iE--qP~~-~~d----~~~~~~l~~~~~~iPIa~dE------~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 289 (389)
T 3ozy_A 223 CYWFE--EPLS-IDD----IEGHRILRAQGTPVRIATGE------NLYTRNAFNDYIRNDAIDVLQADASRAGGITEALA 289 (389)
T ss_dssp CSEEE--SCSC-TTC----HHHHHHHHTTCCSSEEEECT------TCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHH
T ss_pred CCEEE--CCCC-ccc----HHHHHHHHhcCCCCCEEeCC------CCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 87653 4432 112 44567787 65 4665432 2345778888863 56788898654 222 3
Q ss_pred Hhhhh-CCceEEEecC
Q 018253 224 VEHYT-GNGIVVWSGN 238 (359)
Q Consensus 224 l~~~~-~~~~~v~~G~ 238 (359)
+.+++ .-++.++.|.
T Consensus 290 ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 290 ISASAASAHLAWNPHT 305 (389)
T ss_dssp HHHHHHHTTCEECCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 43332 2356666553
No 309
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=78.78 E-value=4.2 Score=36.41 Aligned_cols=103 Identities=9% Similarity=0.053 Sum_probs=61.7
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
+.++.+++.|++.+++..+...-+ ++-.++++.+.+. .+++++.+.+ .+.++.+.++|+|.+.+..-
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~~p----~~l~~~i~~~~~~---g~~v~~~v~t------~eea~~a~~~Gad~Ig~~~~ 158 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRSRP----VDIDSLLTRIRLH---GLLAMADCST------VNEGISCHQKGIEFIGTTLS 158 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCS----SCHHHHHHHHHHT---TCEEEEECSS------HHHHHHHHHTTCSEEECTTT
T ss_pred HHHHHHHHcCCCEEEECccccCCh----HHHHHHHHHHHHC---CCEEEEecCC------HHHHHHHHhCCCCEEEecCc
Confidence 446667899999888766654433 3445555555442 5788887753 45567888999999865332
Q ss_pred CCC------CCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCC-CHHHHHHHhcC
Q 018253 163 YYG------KTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDI-PPRVIHTMAQS 209 (359)
Q Consensus 163 ~y~------~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~l-s~e~l~~La~~ 209 (359)
-|. .++ .+.++++.+. .|++-- | .+ +++.+.++.+.
T Consensus 159 g~t~~~~~~~~~----~~li~~l~~~~ipvIA~------G-GI~t~~d~~~~~~~ 202 (229)
T 3q58_A 159 GYTGPITPVEPD----LAMVTQLSHAGCRVIAE------G-RYNTPALAANAIEH 202 (229)
T ss_dssp TSSSSCCCSSCC----HHHHHHHHTTTCCEEEE------S-SCCSHHHHHHHHHT
T ss_pred cCCCCCcCCCCC----HHHHHHHHHcCCCEEEE------C-CCCCHHHHHHHHHc
Confidence 221 122 2445555553 565532 2 34 57777777653
No 310
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=78.78 E-value=23 Score=35.80 Aligned_cols=104 Identities=9% Similarity=-0.011 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec---CCCCHHHHHHHHHHHHhCCC
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT---GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv---g~~st~~ai~la~~a~~~Ga 154 (359)
.+..++.++...++|++.+-++.++.+. +.-.+.++.+.+ .+.++-+.++. ...+.+..++.++.+.++||
T Consensus 116 ddv~~~~ve~a~~aGvd~vrIf~s~sd~-----~ni~~~i~~ak~-~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Ga 189 (539)
T 1rqb_A 116 DEVVDRFVDKSAENGMDVFRVFDAMNDP-----RNMAHAMAAVKK-AGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGA 189 (539)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTCCT-----HHHHHHHHHHHH-TTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTC
T ss_pred ccccHHHHHHHHhCCCCEEEEEEehhHH-----HHHHHHHHHHHH-CCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCC
Confidence 3457888899999999999999999887 222344444433 22233223322 22478899999999999999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc----CCeEEE
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM----GPTIIY 188 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a----~PiiiY 188 (359)
|.+.+. =.....++.++.+.++.+.+. .||-++
T Consensus 190 d~I~L~-DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H 226 (539)
T 1rqb_A 190 DSIALK-DMAALLKPQPAYDIIKAIKDTYGQKTQINLH 226 (539)
T ss_dssp SEEEEE-ETTCCCCHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred CEEEeC-CCCCCcCHHHHHHHHHHHHHhcCCCceEEEE
Confidence 966654 234455678888877777664 355444
No 311
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=78.42 E-value=31 Score=32.35 Aligned_cols=71 Identities=20% Similarity=0.068 Sum_probs=46.3
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHH----HHHHhhCC-----CcEEEEecCCCCHHHHHHHHHHHHhC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIG----HTVNCFGA-----SVKVIGNTGSNSTREAIHATEQGFAV 152 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~----~~v~~~~g-----rvpViagvg~~st~~ai~la~~a~~~ 152 (359)
.++++.++++|++++.+.-+.+- .||.+...+.+. .+++.+.. .+|++..++.. .. +.....+.
T Consensus 190 ~~~~~~~~~aGad~i~i~d~~~~--~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~g~--~~---~l~~l~~~ 262 (354)
T 3cyv_A 190 TLYLNAQIKAGAQAVMIFDTWGG--VLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGG--GQ---WLEAMAET 262 (354)
T ss_dssp HHHHHHHHHTTCSEEEEECTTGG--GSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTT--TT---THHHHHTT
T ss_pred HHHHHHHHHhCCCEEEEeCCccc--cCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECCCH--HH---HHHHHHhc
Confidence 34455677899999988777653 799988776653 33444542 47876655543 22 33445578
Q ss_pred CCCEEEE
Q 018253 153 GMHAALH 159 (359)
Q Consensus 153 Gadav~v 159 (359)
|+|.+.+
T Consensus 263 g~d~i~~ 269 (354)
T 3cyv_A 263 GCDALGL 269 (354)
T ss_dssp SCSEEEC
T ss_pred CCCEEEe
Confidence 9998875
No 312
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=78.41 E-value=11 Score=35.93 Aligned_cols=104 Identities=15% Similarity=0.102 Sum_probs=64.7
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
+...++.+++.|++.+.+.+.. . + .++++...+ ..++|++.+. +. +.++.+.+.|+|++.+.
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~---~--~----~~~i~~~~~---~g~~v~~~v~--t~----~~a~~a~~~GaD~i~v~ 172 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGV---P--D----REVIARLRR---AGTLTLVTAT--TP----EEARAVEAAGADAVIAQ 172 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSC---C--C----HHHHHHHHH---TTCEEEEEES--SH----HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCC---C--c----HHHHHHHHH---CCCeEEEECC--CH----HHHHHHHHcCCCEEEEe
Confidence 5677888889999998875432 1 2 234444443 2468888774 33 45678889999999997
Q ss_pred CCCCC----CCCH--------HHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-CHHHHHHHhcC
Q 018253 161 NPYYG----KTSL--------EGLISHFDSVLSM--GPTIIYNVPSRTGQDI-PPRVIHTMAQS 209 (359)
Q Consensus 161 pP~y~----~~s~--------~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~l-s~e~l~~La~~ 209 (359)
.|-+. ...+ ....+.++++.+. .||+.= | .| +++.+.++.+.
T Consensus 173 g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaa------G-GI~~~~~~~~~l~~ 229 (369)
T 3bw2_A 173 GVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAA------G-GIMRGGQIAAVLAA 229 (369)
T ss_dssp CTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEE------S-SCCSHHHHHHHHHT
T ss_pred CCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEE------C-CCCCHHHHHHHHHc
Confidence 66431 1100 1235666677664 576643 3 35 78888777653
No 313
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=78.33 E-value=7.3 Score=34.78 Aligned_cols=101 Identities=17% Similarity=0.211 Sum_probs=58.0
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
..++..++.|++++...++. ..+++...+ . .++++.|+. +..| +..|.+.|+|.+.+.|
T Consensus 89 d~~~~A~~aGAd~v~~p~~d-----------~~v~~~~~~-~--g~~~i~G~~--t~~e----~~~A~~~Gad~vk~FP- 147 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTPGIT-----------EDILEAGVD-S--EIPLLPGIS--TPSE----IMMGYALGYRRFKLFP- 147 (225)
T ss_dssp HHHHHHHHHTCSSEECSSCC-----------HHHHHHHHH-C--SSCEECEEC--SHHH----HHHHHTTTCCEEEETT-
T ss_pred HHHHHHHHCCCCEEEeCCCC-----------HHHHHHHHH-h--CCCEEEeeC--CHHH----HHHHHHCCCCEEEEcc-
Confidence 45667778899998754432 234444433 2 367888854 3444 4667789999998832
Q ss_pred CCCCCCHHHH--HHHHHHHHhcCC-eEEEeCCCCCCCCCCHHHHHHHhcCCCeEEE
Q 018253 163 YYGKTSLEGL--ISHFDSVLSMGP-TIIYNVPSRTGQDIPPRVIHTMAQSPNLAGV 215 (359)
Q Consensus 163 ~y~~~s~~~l--~~yf~~Ia~a~P-iiiYn~P~~tg~~ls~e~l~~La~~pnivGi 215 (359)
.+.+ .+|++++....| +=+. | +| .++++.+.++.+.+++.|+
T Consensus 148 ------a~~~~G~~~lk~i~~~~~~ipvv--a--iG-GI~~~N~~~~l~~~Ga~~v 192 (225)
T 1mxs_A 148 ------AEISGGVAAIKAFGGPFGDIRFC--P--TG-GVNPANVRNYMALPNVMCV 192 (225)
T ss_dssp ------HHHHTHHHHHHHHHTTTTTCEEE--E--BS-SCCTTTHHHHHHSTTBCCE
T ss_pred ------CccccCHHHHHHHHhhCCCCeEE--E--EC-CCCHHHHHHHHhccCCEEE
Confidence 2222 677777776543 1111 1 23 3556666666654443333
No 314
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=78.31 E-value=11 Score=34.47 Aligned_cols=117 Identities=16% Similarity=0.051 Sum_probs=77.9
Q ss_pred ceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhC---CCcEEEEecCCC
Q 018253 61 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG---ASVKVIGNTGSN 137 (359)
Q Consensus 61 Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~---grvpViagvg~~ 137 (359)
++-.+.++-| +.|.-..+.-..-++.-++.|++-|=+.-.-|..-+=..++-.+-++.+++.+. .-++||.-++-.
T Consensus 68 ~v~v~tVigF-P~G~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L 146 (260)
T 1p1x_A 68 EIRIATVTNF-PHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL 146 (260)
T ss_dssp TSEEEEEEST-TTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH
T ss_pred CceEEEEeCC-CCCCCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC
Confidence 3455556777 577788888888899999999999866666664333334555555555555543 235678888777
Q ss_pred CHHH-HHHHHHHHHhCCCCEEEEcCCCC-CCCCHHHHHHHHHH
Q 018253 138 STRE-AIHATEQGFAVGMHAALHINPYY-GKTSLEGLISHFDS 178 (359)
Q Consensus 138 st~~-ai~la~~a~~~Gadav~v~pP~y-~~~s~~~l~~yf~~ 178 (359)
+.++ -...++.+.++|||.|=..+=|. ...+.+.+.-+-+.
T Consensus 147 ~d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~ 189 (260)
T 1p1x_A 147 KDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEV 189 (260)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHH
Confidence 7677 45889999999999887765444 23355554443333
No 315
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=78.30 E-value=42 Score=32.04 Aligned_cols=133 Identities=11% Similarity=0.006 Sum_probs=90.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccC----ccC-cC-----CC---CHHHHHHHHHHHHHhhCCCcEEEEec-CCCC
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGT----TGE-GQ-----LM---SWDEHIMLIGHTVNCFGASVKVIGNT-GSNS 138 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~Gs----tGE-~~-----~L---T~~Er~~li~~~v~~~~grvpViagv-g~~s 138 (359)
++.+|.+.+.+.+....+.|.+++=+-.. .|- |. .- ..++=.+.++.+++.++.++++.+-+ ++.+
T Consensus 142 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~ 221 (403)
T 2ox4_A 142 KSKGRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTD 221 (403)
T ss_dssp CCCCSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCC
Confidence 45678999999999999999999876531 121 10 01 12444577888888888889999865 4568
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEE
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAG 214 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivG 214 (359)
.++++++++..++.|.+. +--|.- +. -.+.+++|.+. .||+.=. .-.+++.++++.+ .-+++-
T Consensus 222 ~~~ai~~~~~l~~~~i~~--iE~P~~--~~---d~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ 288 (403)
T 2ox4_A 222 LVSAIQFAKAIEEFNIFF--YEEINT--PL---NPRLLKEAKKKIDIPLASGE------RIYSRWGFLPFLEDRSIDVIQ 288 (403)
T ss_dssp HHHHHHHHHHHGGGCEEE--EECCSC--TT---STHHHHHHHHTCCSCEEECT------TCCHHHHHHHHHHTTCCSEEC
T ss_pred HHHHHHHHHHHHhhCCCE--EeCCCC--hh---hHHHHHHHHHhCCCCEEecC------CcCCHHHHHHHHHcCCCCEEe
Confidence 999999999999988764 444532 11 14556667765 5766532 2245788888873 568888
Q ss_pred Eecc
Q 018253 215 VKEC 218 (359)
Q Consensus 215 iK~s 218 (359)
+|-+
T Consensus 289 ik~~ 292 (403)
T 2ox4_A 289 PDLG 292 (403)
T ss_dssp CCHH
T ss_pred cCcc
Confidence 9965
No 316
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=78.30 E-value=12 Score=34.63 Aligned_cols=122 Identities=17% Similarity=0.228 Sum_probs=67.6
Q ss_pred CCceEEeeecCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-CccC-cCCCCH-HHHHHHHHHHHHhhC-CCcEEEEe
Q 018253 59 ALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGE-GQLMSW-DEHIMLIGHTVNCFG-ASVKVIGN 133 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~-ID~~~l~~li~~li~~Gv~Gl~v~G-stGE-~~~LT~-~Er~~li~~~v~~~~-grvpViag 133 (359)
+.||+-..+=-|.+.|+ .|.+..-++++.+++.|++=|=++| ||-= ....|. ||..+++- +++... .++||-+-
T Consensus 9 iMGIlNvTPDSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~p-vi~~l~~~~v~iSID 87 (270)
T 4hb7_A 9 IMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLP-VVEAIVGFDVKISVD 87 (270)
T ss_dssp EEEEEECC----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHH-HHHHHTTSSSEEEEE
T ss_pred EEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHH-HHHHhhcCCCeEEEE
Confidence 57777766666887776 6888888999999999999888887 3322 233454 45555554 455543 34555444
Q ss_pred cCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCC
Q 018253 134 TGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSR 193 (359)
Q Consensus 134 vg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~ 193 (359)
+. .. +-++.|.++||+-+==+ .-...++ +.++.+++. .|+++-+.+..
T Consensus 88 T~--~~----~Va~~al~aGa~iINDV--s~g~~d~----~m~~~va~~~~~~vlMH~~~~ 136 (270)
T 4hb7_A 88 TF--RS----EVAEACLKLGVDMINDQ--WAGLYDH----RMFQIVAKYDAEIILMHNGNG 136 (270)
T ss_dssp CS--CH----HHHHHHHHHTCCEEEET--TTTSSCT----HHHHHHHHTTCEEEEECCCSS
T ss_pred CC--CH----HHHHHHHHhccceeccc--cccccch----hHHHHHHHcCCCeEEeccccC
Confidence 33 33 33556677898743222 1112222 234555665 79888876543
No 317
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=78.11 E-value=21 Score=31.82 Aligned_cols=132 Identities=12% Similarity=0.050 Sum_probs=73.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE---------------ecCCCCHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG---------------NTGSNSTR 140 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia---------------gvg~~st~ 140 (359)
-|.+...+.++.+++.+++||++.+...+.. + ..++.+.+ .++||+. .|+..+.+
T Consensus 45 ~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~----~---~~~~~~~~---~giPvV~~~~~~~~~~~~~~~~~V~~D~~~ 114 (297)
T 3rot_A 45 NDVPKQVQFIESALATYPSGIATTIPSDTAF----S---KSLQRANK---LNIPVIAVDTRPKDKTKNPYLVFLGSDNLL 114 (297)
T ss_dssp CCHHHHHHHHHHHHHTCCSEEEECCCCSSTT----H---HHHHHHHH---HTCCEEEESCCCSCTTTSCCSCEEECCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCHHHH----H---HHHHHHHH---CCCCEEEEcCCCccccccCcceEEccChHH
Confidence 3788889999999999999999987654421 2 22333332 1456544 22233456
Q ss_pred HHHHHHHHHHhCC--CCEEEEcCCCCCCCCHHHHHH-HHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEE
Q 018253 141 EAIHATEQGFAVG--MHAALHINPYYGKTSLEGLIS-HFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 215 (359)
Q Consensus 141 ~ai~la~~a~~~G--adav~v~pP~y~~~s~~~l~~-yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La-~~pnivGi 215 (359)
.....+++..+.| ...+.++...-...+..+-.+ |.+.+.+. .++...... . ...-..+.+.++. ++|.+.+|
T Consensus 115 ~g~~a~~~l~~~g~~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~~~-~-~~~~~~~~~~~~l~~~~~~~ai 192 (297)
T 3rot_A 115 AGKKLGEKALELTPSAKRALVLNPQPGHIGLEKRAYGIKTILQDKGIFFEELDVG-T-DPNQVQSRVKSYFKIHPETNII 192 (297)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECC-S-CHHHHHHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHHHHHhcCCCceEEEEeCCCCcHHHHHHHHHHHHHHHhcCCeEEEeecC-C-ChHHHHHHHHHHHHhCCCCCEE
Confidence 6778888888888 777766643222222333334 44444444 454433211 1 0111123455644 67877777
Q ss_pred eccC
Q 018253 216 KECV 219 (359)
Q Consensus 216 K~ss 219 (359)
=-.+
T Consensus 193 ~~~~ 196 (297)
T 3rot_A 193 FCLT 196 (297)
T ss_dssp EESS
T ss_pred EEcC
Confidence 5443
No 318
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=78.00 E-value=16 Score=33.10 Aligned_cols=24 Identities=8% Similarity=0.109 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCC
Q 018253 140 REAIHATEQGFAVGMHAALHINPY 163 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~ 163 (359)
++..++.+.+++.|.+.+.++.|.
T Consensus 134 e~~~~~~~~~~~~g~~~i~l~~p~ 157 (268)
T 1qop_A 134 EESAPFRQAALRHNIAPIFICPPN 157 (268)
T ss_dssp GGCHHHHHHHHHTTCEEECEECTT
T ss_pred HHHHHHHHHHHHcCCcEEEEECCC
Confidence 445555555666666655555554
No 319
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=77.88 E-value=3.3 Score=36.89 Aligned_cols=86 Identities=16% Similarity=0.238 Sum_probs=51.1
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCC--CCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC---CCC
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQL--MSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV---GMH 155 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~--LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~---Gad 155 (359)
...+++.+.+.|++.+++.+.+-++.. .. .++++.+.+.+ ++||++.=|-.+.+++.++ .++ |||
T Consensus 148 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~----~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~----~~~~~~Gad 217 (244)
T 1vzw_A 148 LYETLDRLNKEGCARYVVTDIAKDGTLQGPN----LELLKNVCAAT--DRPVVASGGVSSLDDLRAI----AGLVPAGVE 217 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEEC-------CCC----HHHHHHHHHTC--SSCEEEESCCCSHHHHHHH----HTTGGGTEE
T ss_pred HHHHHHHHHhCCCCEEEEeccCcccccCCCC----HHHHHHHHHhc--CCCEEEECCCCCHHHHHHH----HhhccCCCc
Confidence 344566677899999998876544322 23 23444444444 5899985333334554443 345 999
Q ss_pred EEEEcCCCCCCC-CHHHHHHHH
Q 018253 156 AALHINPYYGKT-SLEGLISHF 176 (359)
Q Consensus 156 av~v~pP~y~~~-s~~~l~~yf 176 (359)
++++..-.|..+ +.+++.++.
T Consensus 218 gv~vG~al~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 218 GAIVGKALYAKAFTLEEALEAT 239 (244)
T ss_dssp EEEECHHHHTTSSCHHHHHHHH
T ss_pred eeeeeHHHHcCCCCHHHHHHHh
Confidence 999997766543 667776664
No 320
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=77.81 E-value=36 Score=29.94 Aligned_cols=125 Identities=10% Similarity=0.006 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccC---cCCCCHHHHHHHHHHHHHhhCCCc-EEEEecC------C-C-----CHHHHH
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGE---GQLMSWDEHIMLIGHTVNCFGASV-KVIGNTG------S-N-----STREAI 143 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE---~~~LT~~Er~~li~~~v~~~~grv-pViagvg------~-~-----st~~ai 143 (359)
.+.+.++...+.|.+++=+...... ...++.++..++-+.+.+ . .+ .+.++.. + . +.+...
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~ 91 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREA-S--GGLPAVIHASYLVNLGAEGELWEKSVASLA 91 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHH-T--TCCCEEEECCTTCCTTCSSTHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHH-c--CCceEEEecCcccCCCCCHHHHHHHHHHHH
Confidence 6788888888999999866443221 235667777666655544 2 23 3333321 1 1 233456
Q ss_pred HHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc------CCeEEEeCCCCCCCCC--CHHHHHHHh-cCCCe
Q 018253 144 HATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM------GPTIIYNVPSRTGQDI--PPRVIHTMA-QSPNL 212 (359)
Q Consensus 144 ~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a------~PiiiYn~P~~tg~~l--s~e~l~~La-~~pni 212 (359)
+.++.|+++|+..+.+.+.++ +.+.+.+.++++++. ..+.+=|.|.. +..+ +++.+.+|. ++ ++
T Consensus 92 ~~i~~a~~lGa~~vv~h~g~~---~~~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~-~~~~~~~~~~~~~l~~~v-~v 164 (270)
T 3aam_A 92 DDLEKAALLGVEYVVVHPGSG---RPERVKEGALKALRLAGVRSRPVLLVENTAGG-GEKVGARFEELAWLVADT-PL 164 (270)
T ss_dssp HHHHHHHHHTCCEEEECCCBS---CHHHHHHHHHHHHHHHTCCSSSEEEEECCCCC-TTBSCCSHHHHHHHHTTS-SC
T ss_pred HHHHHHHHcCCCEEEECCCCC---CHHHHHHHHHHHHHhhcccCCCEEEEecCCCC-CCccCCCHHHHHHHHHhC-CE
Confidence 667788899999888776665 347788888877642 35677777643 2233 899999988 46 54
No 321
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=77.63 E-value=6.6 Score=33.83 Aligned_cols=65 Identities=9% Similarity=-0.047 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhC-CCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEE
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 158 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~-grvpViagvg~~st~~ai~la~~a~~~Gadav~ 158 (359)
.+.+.++.+.+.|++.+-+- ...++.++..++++.+.+... -+++|++. +..+.+.++|+|++.
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~-----~~~~~~~~~~~~~~~l~~~~~~~~v~v~v~----------~~~~~a~~~gad~v~ 91 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMR-----IKNAPTREMYEIGKTLRQLTREYDALFFVD----------DRVDVALAVDADGVQ 91 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEEC-----CCSCCHHHHHHHHHHHHHHHHHTTCEEEEE----------SCHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHCCCCEEEEC-----CCCCCHHHHHHHHHHHHHHHHHcCCeEEEc----------ChHHHHHHcCCCEEE
Confidence 45667888889999988554 234677777777776665433 35788884 233667788999996
Q ss_pred E
Q 018253 159 H 159 (359)
Q Consensus 159 v 159 (359)
+
T Consensus 92 l 92 (215)
T 1xi3_A 92 L 92 (215)
T ss_dssp E
T ss_pred E
Confidence 6
No 322
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=77.62 E-value=32 Score=30.74 Aligned_cols=119 Identities=12% Similarity=0.033 Sum_probs=75.5
Q ss_pred eEEeeecCCCC--CC--CCCHHHHHHHHHHHHHC-CCCEEEEccCccCcCCC-CHHHHHHHHHHHHHhhCCCcEEEEec-
Q 018253 62 LITAIKTPYLP--DG--RFDLEAYDDLVNMQIVN-GAEGMIVGGTTGEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNT- 134 (359)
Q Consensus 62 i~~al~TPF~~--dg--~ID~~~l~~li~~li~~-Gv~Gl~v~GstGE~~~L-T~~Er~~li~~~v~~~~grvpViagv- 134 (359)
-+|.++|--+. .| +.+.+...++++..++. +++-+=+ |.... ..+...++++.+.+ ++++||+.-
T Consensus 62 ~~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDv-----El~~~~~~~~~~~l~~~~~~---~~~kvI~S~H 133 (238)
T 1sfl_A 62 SFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDI-----EWQADIDIEKHQRIITHLQQ---YNKEVIISHH 133 (238)
T ss_dssp CSEEEEECCBGGGTSCBCCCHHHHHHHHHHGGGCTTCCEEEE-----ECCTTSCHHHHHHHHHHHHH---TTCEEEEEEE
T ss_pred CCCEEEEeeccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEE-----EccCCCChHHHHHHHHHHHh---cCCEEEEEec
Confidence 34666665443 34 47888888999988886 5887766 54432 34445566655433 467888864
Q ss_pred ---CCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHh-----cCCeEEEeCC
Q 018253 135 ---GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS-----MGPTIIYNVP 191 (359)
Q Consensus 135 ---g~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~-----a~PiiiYn~P 191 (359)
+..+.++.+++.+++++.|||-+=+.... .+.++..+-++...+ ..|++.|+.-
T Consensus 134 df~~tp~~~el~~~~~~~~~~gaDivKia~~a---~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG 195 (238)
T 1sfl_A 134 NFESTPPLDELQFIFFKMQKFNPEYVKLAVMP---HNKNDVLNLLQAMSTFSDTMDCKVVGISMS 195 (238)
T ss_dssp ESSCCCCHHHHHHHHHHHHTTCCSEEEEEECC---SSHHHHHHHHHHHHHHHHHCSSEEEEEECT
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCCEEEEEecC---CCHHHHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 34567888999999999999987443222 245554444433322 2589998853
No 323
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=77.56 E-value=14 Score=34.71 Aligned_cols=73 Identities=16% Similarity=0.132 Sum_probs=48.9
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHH----HHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCE
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLI----GHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHA 156 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li----~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gada 156 (359)
+.++++.++++|+++|.+.-+.|-...||.++.++.+ +.+++.++ ++|++ +..... .. +.....+.|+|+
T Consensus 192 ~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~-~~~ii-h~~g~~-~~---~l~~~~~~g~d~ 265 (348)
T 4ay7_A 192 SIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVN-SVTVL-HICGNV-NP---ILSDMADCGFEG 265 (348)
T ss_dssp HHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSS-SEEEE-ECCSCC-HH---HHHHHHTSCCSE
T ss_pred HHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhcc-CCcEE-EecCCc-HH---HHHHHHHhcccc
Confidence 3345566778999999999888866789999988864 44455554 45665 443332 22 344556789998
Q ss_pred EEE
Q 018253 157 ALH 159 (359)
Q Consensus 157 v~v 159 (359)
+-+
T Consensus 266 i~~ 268 (348)
T 4ay7_A 266 LSV 268 (348)
T ss_dssp EEC
T ss_pred ccc
Confidence 753
No 324
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=77.53 E-value=12 Score=33.67 Aligned_cols=99 Identities=16% Similarity=0.216 Sum_probs=63.1
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
...++..+++|++.++..+. + .++++.+.+. .+|++.|+. +..| +..|.++|+|.+-+.|
T Consensus 96 ~~~a~~Ai~AGA~fIvsP~~-------~----~~vi~~~~~~---gi~~ipGv~--TptE----i~~A~~~Gad~vK~FP 155 (232)
T 4e38_A 96 GEQALAAKEAGATFVVSPGF-------N----PNTVRACQEI---GIDIVPGVN--NPST----VEAALEMGLTTLKFFP 155 (232)
T ss_dssp HHHHHHHHHHTCSEEECSSC-------C----HHHHHHHHHH---TCEEECEEC--SHHH----HHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHcCCCEEEeCCC-------C----HHHHHHHHHc---CCCEEcCCC--CHHH----HHHHHHcCCCEEEECc
Confidence 45677788899999875542 2 2455555443 689999987 3444 4566789999998843
Q ss_pred CCCCCCCHHHHHHHHHHHHhcC---CeEEEeCCCCCCCCCCHHHHHHHhcCCCe
Q 018253 162 PYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPPRVIHTMAQSPNL 212 (359)
Q Consensus 162 P~y~~~s~~~l~~yf~~Ia~a~---PiiiYn~P~~tg~~ls~e~l~~La~~pni 212 (359)
. +.-+=.+|.+++.... |++ | +| .++++.+.+..+.+++
T Consensus 156 -a----~~~gG~~~lkal~~p~p~ip~~----p--tG-GI~~~n~~~~l~aGa~ 197 (232)
T 4e38_A 156 -A----EASGGISMVKSLVGPYGDIRLM----P--TG-GITPSNIDNYLAIPQV 197 (232)
T ss_dssp -T----TTTTHHHHHHHHHTTCTTCEEE----E--BS-SCCTTTHHHHHTSTTB
T ss_pred -C----ccccCHHHHHHHHHHhcCCCee----e--Ec-CCCHHHHHHHHHCCCe
Confidence 2 1111247888887653 343 3 33 3567777777766654
No 325
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=77.52 E-value=30 Score=32.83 Aligned_cols=97 Identities=14% Similarity=0.054 Sum_probs=64.9
Q ss_pred eEEeeec-CCCCCCCCCH-------HHHHHHHHHH--HHCCCCEEEEc--cCc--------cCcCCCCHHHHHHHHHHHH
Q 018253 62 LITAIKT-PYLPDGRFDL-------EAYDDLVNMQ--IVNGAEGMIVG--GTT--------GEGQLMSWDEHIMLIGHTV 121 (359)
Q Consensus 62 i~~al~T-PF~~dg~ID~-------~~l~~li~~l--i~~Gv~Gl~v~--Gst--------GE~~~LT~~Er~~li~~~v 121 (359)
++.-+++ |....++.|. +.+..-++.. .+.|+|=+=+. |+. || ...|.+|-.+-++.++
T Consensus 163 lllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~-~~y~~~ea~~~f~~~~ 241 (332)
T 3iv3_A 163 FFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGE-VVYSKEEAAQAFREQE 241 (332)
T ss_dssp EEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSC-CCBCHHHHHHHHHHHH
T ss_pred eEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhccccccc-ccccHHHHHHHHHHHH
Confidence 3444444 5543344543 3366677766 56698865544 322 23 4668888888777777
Q ss_pred HhhCCCcEEEE-ecCCCCHHHHHHHHHHHHhCCC--CEEEEcCC
Q 018253 122 NCFGASVKVIG-NTGSNSTREAIHATEQGFAVGM--HAALHINP 162 (359)
Q Consensus 122 ~~~~grvpVia-gvg~~st~~ai~la~~a~~~Ga--dav~v~pP 162 (359)
+.. .+|+|+ +-| .+.++.++..+.|.++|+ .++++---
T Consensus 242 ~a~--~~P~v~lsgG-~~~~~fl~~v~~A~~aGa~f~Gv~~GRn 282 (332)
T 3iv3_A 242 AST--DLPYIYLSAG-VSAELFQETLVFAHKAGAKFNGVLCGRA 282 (332)
T ss_dssp HTC--SSCEEEECTT-CCHHHHHHHHHHHHHHTCCCCEEEECHH
T ss_pred hcC--CCCEEEECCC-CCHHHHHHHHHHHHHcCCCcceEEeeHH
Confidence 643 689765 555 478999999999999999 99998643
No 326
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=77.47 E-value=12 Score=35.89 Aligned_cols=76 Identities=22% Similarity=0.293 Sum_probs=43.9
Q ss_pred HHHHHHCCCCEEEEccCcc---C---cCCCCHHHHH-HHHHHHH---HhhCCC-cEEEEecCCCCHHHHHHHHHHHHhCC
Q 018253 85 VNMQIVNGAEGMIVGGTTG---E---GQLMSWDEHI-MLIGHTV---NCFGAS-VKVIGNTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 85 i~~li~~Gv~Gl~v~GstG---E---~~~LT~~Er~-~li~~~v---~~~~gr-vpViagvg~~st~~ai~la~~a~~~G 153 (359)
++.+++.|+++|.+ |+.| . .+-.+.-+-. ++.+... ..++++ +|||+.=|=.+..++++. ..+|
T Consensus 225 a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~ka----lalG 299 (393)
T 2qr6_A 225 ALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKA----IACG 299 (393)
T ss_dssp HHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHH----HHHT
T ss_pred HHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHH----HHcC
Confidence 55667899999999 6533 1 1113322222 2222211 115555 999984443355555443 3479
Q ss_pred CCEEEEcCCCCC
Q 018253 154 MHAALHINPYYG 165 (359)
Q Consensus 154 adav~v~pP~y~ 165 (359)
||+|++-.|+..
T Consensus 300 A~~V~iG~~~l~ 311 (393)
T 2qr6_A 300 ADAVVLGSPLAR 311 (393)
T ss_dssp CSEEEECGGGGG
T ss_pred CCEEEECHHHHc
Confidence 999999988654
No 327
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=77.44 E-value=2.5 Score=46.22 Aligned_cols=80 Identities=10% Similarity=0.106 Sum_probs=52.6
Q ss_pred HHHHHHHHHHCCCCEEEEccCcc---------------------CcCCCC-HHHH---HHHHHHHHHhhCCCcEEEEecC
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTG---------------------EGQLMS-WDEH---IMLIGHTVNCFGASVKVIGNTG 135 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstG---------------------E~~~LT-~~Er---~~li~~~v~~~~grvpViagvg 135 (359)
+..+++.+.+.|+++|.+..|+. +...++ ...+ .+++..+.+.+ +++|||+.=|
T Consensus 717 ~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~-~~ipvi~~GG 795 (1025)
T 1gte_A 717 IVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL-PGFPILATGG 795 (1025)
T ss_dssp HHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS-TTCCEEEESS
T ss_pred HHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc-CCCCEEEecC
Confidence 56677778899999999943321 111111 1122 45677777766 4699987444
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 018253 136 SNSTREAIHATEQGFAVGMHAALHINPYYG 165 (359)
Q Consensus 136 ~~st~~ai~la~~a~~~Gadav~v~pP~y~ 165 (359)
=.+.+++.+... +|||+|++..+.++
T Consensus 796 I~s~~da~~~l~----~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 796 IDSAESGLQFLH----SGASVLQVCSAVQN 821 (1025)
T ss_dssp CCSHHHHHHHHH----TTCSEEEESHHHHT
T ss_pred cCCHHHHHHHHH----cCCCEEEEeecccc
Confidence 446777776664 79999999988665
No 328
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=77.37 E-value=16 Score=32.58 Aligned_cols=163 Identities=14% Similarity=0.052 Sum_probs=92.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCc-CCCCHHHHHHHHHHHHHhhCCCcEEEE---------------------
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG-QLMSWDEHIMLIGHTVNCFGASVKVIG--------------------- 132 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~-~~LT~~Er~~li~~~v~~~~grvpVia--------------------- 132 (359)
..|+..+.+-++.+.+.|++-+-+=-.-|-| +.+|. -..+++...+.++ +.|+.+
T Consensus 14 a~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t~--G~~~v~~lr~~~p-~~~~dvhLmv~dp~~~i~~~~~Ad~it 90 (227)
T 1tqx_A 14 ASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSF--GPPVINNLKKYTK-SIFFDVHLMVEYPEKYVPLLKTSNQLT 90 (227)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCC--CHHHHHHHGGGCS-SCEEEEEEESSCGGGGGGGCTTSSEEE
T ss_pred cCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchhc--CHHHHHHHHHhCC-CCcEEEEEEEcCHHHHHHHHHhCCEEE
Confidence 4788889999999999998875443223332 12332 1145555544431 233333
Q ss_pred -ecCCC--CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHh--cCCeEEEe--CCCCCCCCCCHHHHHH
Q 018253 133 -NTGSN--STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS--MGPTIIYN--VPSRTGQDIPPRVIHT 205 (359)
Q Consensus 133 -gvg~~--st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~--a~PiiiYn--~P~~tg~~ls~e~l~~ 205 (359)
+..+. ....++++++...+.|....+.+.|.- +.+. .+.+.+ ....++.= +|+..|+.+.++.+.+
T Consensus 91 vH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~t----p~~~---~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~k 163 (227)
T 1tqx_A 91 FHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKT----DVQK---LVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGK 163 (227)
T ss_dssp EEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTS----CGGG---GHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHH
T ss_pred EeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCC----cHHH---HHHHhhcCCcCEEEEeeeccCCCCcccchHHHHH
Confidence 33222 356677766688888888777775543 1222 233334 23333222 4777787777777666
Q ss_pred HhcCCCeEEEeccCchhhHhhhhCCceEEEecCCchhhhhhhhcCCceeecccccc
Q 018253 206 MAQSPNLAGVKECVGNDRVEHYTGNGIVVWSGNDDQCHDARWNHGATGVISVTSNL 261 (359)
Q Consensus 206 La~~pnivGiK~ss~d~~l~~~~~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~ 261 (359)
+.+.-..+ .+-.+.|-.|-..........+|++.++.|.+-+
T Consensus 164 i~~lr~~~--------------~~~~I~VdGGI~~~ti~~~~~aGAd~~V~GsaIf 205 (227)
T 1tqx_A 164 VSFLRKKY--------------KNLNIQVDGGLNIETTEISASHGANIIVAGTSIF 205 (227)
T ss_dssp HHHHHHHC--------------TTCEEEEESSCCHHHHHHHHHHTCCEEEESHHHH
T ss_pred HHHHHHhc--------------cCCeEEEECCCCHHHHHHHHHcCCCEEEEeHHHh
Confidence 64321111 0223555667665555566789999999986644
No 329
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=77.28 E-value=5.2 Score=35.74 Aligned_cols=76 Identities=13% Similarity=0.115 Sum_probs=48.3
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
...+++.+.+.|++.|.+..-++.+..-. ...++++.+.+.+ ++||+++=+-.+.++ ++.+.+.|||++++.
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~--~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~----~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSG--YDTEMIRFVRPLT--TLPIIASGGAGKMEH----FLEAFLRGADKVSIN 108 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSC--CCHHHHHHHGGGC--CSCEEEESCCCSHHH----HHHHHHTTCSEECCS
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCc--ccHHHHHHHHHhC--CCCEEEeCCCCCHHH----HHHHHHcCCCeeehh
Confidence 34577777889999998865443221110 1134555555554 689999766555555 444456899999987
Q ss_pred CCCC
Q 018253 161 NPYY 164 (359)
Q Consensus 161 pP~y 164 (359)
...+
T Consensus 109 ~~~l 112 (247)
T 3tdn_A 109 TAAV 112 (247)
T ss_dssp HHHH
T ss_pred hHHh
Confidence 6554
No 330
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=77.27 E-value=7.1 Score=38.33 Aligned_cols=87 Identities=7% Similarity=-0.023 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCc----cCcCCCCHHHHHHHHHHHHHhh------------------CCCcE-EEEec
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTT----GEGQLMSWDEHIMLIGHTVNCF------------------GASVK-VIGNT 134 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~Gst----GE~~~LT~~Er~~li~~~v~~~------------------~grvp-Viagv 134 (359)
.+.+...++.+-+. ++.|-+|-|. |-...-..+.-.++++.+.+.. ..++| |++=+
T Consensus 198 ~~Dy~~~a~~l~~~-ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi 276 (415)
T 3i65_A 198 VDDLKYCINKIGRY-ADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKL 276 (415)
T ss_dssp HHHHHHHHHHHGGG-CSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEE
T ss_pred HHHHHHHHHHHHhh-CCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEe
Confidence 45566667666444 8888888653 3332334455567777777653 13678 78766
Q ss_pred CCC-CHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 018253 135 GSN-STREAIHATEQGFAVGMHAALHINPYYG 165 (359)
Q Consensus 135 g~~-st~~ai~la~~a~~~Gadav~v~pP~y~ 165 (359)
.-. +.++..+.++.+++.|+|++.+.+-...
T Consensus 277 ~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~ 308 (415)
T 3i65_A 277 APDLNQEQKKEIADVLLETNIDGMIISNTTTQ 308 (415)
T ss_dssp CSCCCHHHHHHHHHHHHHHTCSEEEECCCBSC
T ss_pred cCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcc
Confidence 543 4457889999999999999988876553
No 331
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=77.14 E-value=12 Score=38.80 Aligned_cols=84 Identities=14% Similarity=0.014 Sum_probs=56.3
Q ss_pred CCHHHHHHHHH-------HHHHCCCCEEEEccCccC----------------cCCCCHHHHHHHHHH----HHHhhCCCc
Q 018253 76 FDLEAYDDLVN-------MQIVNGAEGMIVGGTTGE----------------GQLMSWDEHIMLIGH----TVNCFGASV 128 (359)
Q Consensus 76 ID~~~l~~li~-------~li~~Gv~Gl~v~GstGE----------------~~~LT~~Er~~li~~----~v~~~~grv 128 (359)
+..+.++++++ +..++|.|||=+.|..|= -+-=|.+-|.+++.. +++.++.+.
T Consensus 146 ~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~ 225 (690)
T 3k30_A 146 MTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRA 225 (690)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCc
Confidence 44555555544 455789999999877664 112256666655544 445566677
Q ss_pred EEEEecC-------CCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 129 KVIGNTG-------SNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 129 pViagvg-------~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
||.+=++ +.+.++++++++.+++ |+|.+-+.
T Consensus 226 ~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~ 263 (690)
T 3k30_A 226 AVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFA 263 (690)
T ss_dssp EEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEE
T ss_pred eEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEe
Confidence 8877552 3457999999999998 79987664
No 332
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=77.02 E-value=28 Score=33.06 Aligned_cols=118 Identities=12% Similarity=-0.087 Sum_probs=76.4
Q ss_pred HHHHHHHCCCCEEEEccCccCc----------------------CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHH
Q 018253 84 LVNMQIVNGAEGMIVGGTTGEG----------------------QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTRE 141 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~GstGE~----------------------~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ 141 (359)
.++.+.+.|..++.+-+.|-|- .....++..+-++...+. ..+.||+++++..+.++
T Consensus 64 ~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~~-~~~~pvivsI~g~~~~d 142 (345)
T 3oix_A 64 ELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDYVTELQKQ-PDSKNHFLSLVGMSPEE 142 (345)
T ss_dssp HHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHHHHHHHHS-TTCCCCEEEECCSSHHH
T ss_pred HHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHHHHHHhhc-cCCCCEEEEecCCCHHH
Confidence 4445567786665555444442 123455555555443221 23579999999999999
Q ss_pred HHHHHHHHHhCCCC-EEEEc--CCCC-----CCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh
Q 018253 142 AIHATEQGFAVGMH-AALHI--NPYY-----GKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA 207 (359)
Q Consensus 142 ai~la~~a~~~Gad-av~v~--pP~y-----~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La 207 (359)
-++.++.+++.|++ ++-+= -|.- ...+.+.+.+..++|.++ .||++==-|. ++.+.+++++
T Consensus 143 ~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~-----~~~~~~a~~~ 213 (345)
T 3oix_A 143 THTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPY-----FDIVHFDQAA 213 (345)
T ss_dssp HHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC-----CCHHHHHHHH
T ss_pred HHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHH
Confidence 99999999999987 55432 2321 113557788888888776 6998877663 4666666665
No 333
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=76.80 E-value=8.7 Score=34.38 Aligned_cols=135 Identities=11% Similarity=0.086 Sum_probs=75.6
Q ss_pred HHHHHHHHHHCCCCEEEEccCccC-cCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC----CC----HHHHHHHHHHHHh
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGE-GQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS----NS----TREAIHATEQGFA 151 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE-~~~LT~~Er~~li~~~v~~~~grvpViagvg~----~s----t~~ai~la~~a~~ 151 (359)
+...++.+.+.|.+||=+.+..+. ...++.++..++-+ ..+..+=++..+..... .. .+...+.++.|++
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~-~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~ 95 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELN-CLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANW 95 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHH-HTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHH-HHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 566788888999999987553221 11233444444433 33333323333321111 11 2345557788889
Q ss_pred CCCCEEEEcCCCCCC--CCH---HHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHhc---CCCeEEEecc
Q 018253 152 VGMHAALHINPYYGK--TSL---EGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGVKEC 218 (359)
Q Consensus 152 ~Gadav~v~pP~y~~--~s~---~~l~~yf~~Ia~a-----~PiiiYn~P~~tg~~ls~e~l~~La~---~pnivGiK~s 218 (359)
+|+..+.+.+..... .++ +.+.+.++.+++. +.+.+-|.|.. ..-+++.+.+|.+ .|++.-.=|.
T Consensus 96 lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~--~~~~~~~~~~l~~~~~~~~vg~~~D~ 173 (286)
T 3dx5_A 96 FKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNT--LTDTLPSTLELLGEVDHPNLKINLDF 173 (286)
T ss_dssp HTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTS--TTSSHHHHHHHHHHHCCTTEEEEEEH
T ss_pred hCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCc--CcCCHHHHHHHHHhcCCCCeEEEecc
Confidence 999999887655432 233 3456666666642 46788887642 2235777777763 5776544443
No 334
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=76.65 E-value=54 Score=31.30 Aligned_cols=124 Identities=9% Similarity=0.028 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
-|.+.+.+.+...++.|.+++=+-.. . +.++-.+.++.+.+.++.++++.+-+ ++.+.++++++++..++.|.
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g--~----~~~~~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 217 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAG--G----PLKADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNL 217 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECC--S----CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHhhhhheeeccc--C----CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 36788888888888999988776432 1 45666788888888888889998865 45689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCeEEEecc
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKEC 218 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La--~~pnivGiK~s 218 (359)
+.+ --|.- + +-.+.+++|.+. .||+.=. .-.+++.+.++. ..-+++-+|-+
T Consensus 218 ~~i--EqP~~--~---~~~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~ 272 (397)
T 2qde_A 218 SKI--EQPLP--A---WDLDGMARLRGKVATPIYADE------SAQELHDLLAIINKGAADGLMIKTQ 272 (397)
T ss_dssp SCE--ECCSC--T---TCHHHHHHHHTTCSSCEEEST------TCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CEE--ECCCC--h---hhHHHHHHHHhhCCCCEEEeC------CcCCHHHHHHHHHcCCCCEEEEecc
Confidence 853 34431 1 125566777765 5766432 234678888877 35789999975
No 335
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=76.65 E-value=3.3 Score=38.82 Aligned_cols=119 Identities=16% Similarity=0.187 Sum_probs=61.0
Q ss_pred CCceEEeeecCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-CccCc-CCCC-HHHHHHHHHHHHHhhCCCcEEEEec
Q 018253 59 ALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEG-QLMS-WDEHIMLIGHTVNCFGASVKVIGNT 134 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~-ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~-~~LT-~~Er~~li~~~v~~~~grvpViagv 134 (359)
..||+-..+=-|.+.|+ .|.+...++.+.+++.|++-|=++| ||.-+ ...+ .+|..+++..+......++||.+-+
T Consensus 31 iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT 110 (294)
T 2dqw_A 31 LLGVLNLTPDSFSDGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDT 110 (294)
T ss_dssp EEEEEECCC-------------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEEC
T ss_pred EEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEC
Confidence 67887766666887776 5899999999999999999999999 55333 2233 4555566555444333367776544
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 135 GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 135 g~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
.. .+ -++.|.++|++-+--+.- . ..++ .+..+++. .|+++-+.
T Consensus 111 ~~--~~----Va~aAl~aGa~iINdVsg---~-~d~~---m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 111 RK--PE----VAEEALKLGAHLLNDVTG---L-RDER---MVALAARHGVAAVVMHM 154 (294)
T ss_dssp SC--HH----HHHHHHHHTCSEEECSSC---S-CCHH---HHHHHHHHTCEEEEECC
T ss_pred CC--HH----HHHHHHHhCCCEEEECCC---C-CChH---HHHHHHHhCCCEEEEcC
Confidence 43 32 234444459984433322 2 2233 34445554 78888775
No 336
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=76.64 E-value=34 Score=30.19 Aligned_cols=131 Identities=9% Similarity=0.040 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-e-----------cCCCCHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N-----------TGSNSTREAI 143 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-g-----------vg~~st~~ai 143 (359)
-|.+...+.++.+++.+++||++.+...+. -...++.+.+. ++||+. + |+....+-..
T Consensus 53 ~~~~~~~~~i~~l~~~~vdgiii~~~~~~~-------~~~~~~~~~~~---~iPvV~~~~~~~~~~~~~~V~~D~~~~g~ 122 (304)
T 3gbv_A 53 YDYNSFVATSQAVIEEQPDGVMFAPTVPQY-------TKGFTDALNEL---GIPYIYIDSQIKDAPPLAFFGQNSHQSGY 122 (304)
T ss_dssp SCHHHHHHHHHHHHTTCCSEEEECCSSGGG-------THHHHHHHHHH---TCCEEEESSCCTTSCCSEEEECCHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEECCCChHH-------HHHHHHHHHHC---CCeEEEEeCCCCCCCceEEEecChHHHHH
Confidence 577888899999999999999999875442 12233333332 456543 2 2333455677
Q ss_pred HHHHHHHhCCC--CEEEEcC-----CCCCCCCHHHHHHHHHHHHhc-CC---eEEEeCCCCCCCCCCHHHHHHHh-cCCC
Q 018253 144 HATEQGFAVGM--HAALHIN-----PYYGKTSLEGLISHFDSVLSM-GP---TIIYNVPSRTGQDIPPRVIHTMA-QSPN 211 (359)
Q Consensus 144 ~la~~a~~~Ga--dav~v~p-----P~y~~~s~~~l~~yf~~Ia~a-~P---iiiYn~P~~tg~~ls~e~l~~La-~~pn 211 (359)
..+++..+.|- .-+.++. +.......+-...|.+.+.+. .+ +.++... ....-..+.+.++. +.|.
T Consensus 123 ~a~~~l~~~g~~~~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~ 200 (304)
T 3gbv_A 123 FAARMLMLLAVNDREIVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPACNILELNLHA--DLNIEDSRMLDDFFREHPD 200 (304)
T ss_dssp HHHHHHHHHSTTCSEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTSEEEEEEEES--SCSSCHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCCCeEEEEEecccCCccchhHHHHHHHHHHHHHhhCCCcEEEEeeecC--CCHHHHHHHHHHHHHhCCC
Confidence 77888888887 6676654 222122233344444555444 32 2222211 11222345666665 5666
Q ss_pred eEEEecc
Q 018253 212 LAGVKEC 218 (359)
Q Consensus 212 ivGiK~s 218 (359)
+.+|=-.
T Consensus 201 ~~ai~~~ 207 (304)
T 3gbv_A 201 VKHGITF 207 (304)
T ss_dssp CCEEEES
T ss_pred eEEEEEc
Confidence 6666533
No 337
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=76.57 E-value=9.8 Score=33.62 Aligned_cols=129 Identities=10% Similarity=0.051 Sum_probs=73.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-e----------cCCCCHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N----------TGSNSTREAIHA 145 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-g----------vg~~st~~ai~l 145 (359)
|.+...++++.+++.+++|+++.+... + ..++.+. ..++||+. + |+....+.....
T Consensus 48 ~~~~~~~~~~~l~~~~vdgiIi~~~~~-------~---~~~~~l~---~~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a 114 (276)
T 3jy6_A 48 DIEREKTLLRAIGSRGFDGLILQSFSN-------P---QTVQEIL---HQQMPVVSVDREMDACPWPQVVTDNFEAAKAA 114 (276)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEESSCC-------H---HHHHHHH---TTSSCEEEESCCCTTCSSCEEECCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCCc-------H---HHHHHHH---HCCCCEEEEecccCCCCCCEEEEChHHHHHHH
Confidence 567778899999999999999988653 2 2333322 23677654 2 223345667778
Q ss_pred HHHHHhCCCCEEEEcCCCCC-CCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHH-HhcCCCeEEEeccC
Q 018253 146 TEQGFAVGMHAALHINPYYG-KTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHT-MAQSPNLAGVKECV 219 (359)
Q Consensus 146 a~~a~~~Gadav~v~pP~y~-~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~-La~~pnivGiK~ss 219 (359)
+++..+.|...+.++..... ..+..+-.+-|++..+..|.++.......... ..+.+.+ |.+.|.+-+|=-.+
T Consensus 115 ~~~L~~~G~~~I~~i~~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~ai~~~~ 189 (276)
T 3jy6_A 115 TTAFRQQGYQHVVVLTSELELSRTRQERYRGILAAAQDVDVLEVSESSYNHSE-VHQRLTQLITQNDQKTVAFALK 189 (276)
T ss_dssp HHHHHTTTCCEEEEEEECSTTCHHHHHHHHHHHTTCSEEEEEEECSSSCCHHH-HHHHHHHHHHSSSSCEEEEESS
T ss_pred HHHHHHcCCCeEEEEecCCCCCchHHHHHHHHHHHHHhCCcEEEeccccCCcH-HHHHHHHHHhcCCCCcEEEEeC
Confidence 88889999988766654332 22323444445444443354444322111111 2233333 44578888776443
No 338
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=76.53 E-value=6.1 Score=37.74 Aligned_cols=66 Identities=6% Similarity=0.007 Sum_probs=43.8
Q ss_pred HHHHHHHC--CCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 84 LVNMQIVN--GAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 84 li~~li~~--Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
.++.+++. |++.+.+-.+.|. ...-.+.++.+.+..+ ++||++|... + .+.++.+.++|+|++.+.
T Consensus 122 ~~~~l~~~~~g~~~i~i~~~~g~-----~~~~~~~i~~lr~~~~-~~~vi~g~v~-t----~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 122 QLEQILEAIPQVKYICLDVANGY-----SEHFVEFVKDVRKRFP-QHTIMAGNVV-T----GEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHCTTCCEEEEECSCTT-----BHHHHHHHHHHHHHCT-TSEEEEEEEC-S----HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHhccCCCCEEEEEecCCC-----cHHHHHHHHHHHHhcC-CCeEEEEeCC-C----HHHHHHHHHhCCCEEEEC
Confidence 45556665 9998776544442 2344566776666653 6899986432 3 456678889999999774
No 339
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=76.27 E-value=2.1 Score=42.03 Aligned_cols=88 Identities=9% Similarity=0.112 Sum_probs=58.7
Q ss_pred CCCHHHHHHHHHHHHH-CCCCEEEEccCccCcCCC----C-HHHHHHHHHHHHHhhCCCcEEEEecCC-CCHHHHHHHHH
Q 018253 75 RFDLEAYDDLVNMQIV-NGAEGMIVGGTTGEGQLM----S-WDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATE 147 (359)
Q Consensus 75 ~ID~~~l~~li~~li~-~Gv~Gl~v~GstGE~~~L----T-~~Er~~li~~~v~~~~grvpViagvg~-~st~~ai~la~ 147 (359)
-++.+....+++.|.+ .|++.|-+-+.+.+.+.. . ......+++.+.+.+++++|||+ +|. .+.+++.+..
T Consensus 260 G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~-~GgI~t~e~Ae~~L- 337 (419)
T 3l5a_A 260 GYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIA-SGGINSPESALDAL- 337 (419)
T ss_dssp EECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEE-CSSCCSHHHHHHHG-
T ss_pred CCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEE-ECCCCCHHHHHHHH-
Confidence 3678889999999999 999999988765421100 0 00122456667777888899886 455 4555444433
Q ss_pred HHHhCCCCEEEEcCCCCCCCC
Q 018253 148 QGFAVGMHAALHINPYYGKTS 168 (359)
Q Consensus 148 ~a~~~Gadav~v~pP~y~~~s 168 (359)
+. +|.|++.-|+...|.
T Consensus 338 ---~~-aDlVaiGR~~IanPd 354 (419)
T 3l5a_A 338 ---QH-ADMVGMSSPFVTEPD 354 (419)
T ss_dssp ---GG-CSEEEESTHHHHCTT
T ss_pred ---Hh-CCcHHHHHHHHHCcH
Confidence 34 999999988776554
No 340
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=76.26 E-value=22 Score=33.74 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=44.2
Q ss_pred HHHHHHHHCCCCEEEEccCcc--Cc------CCCCHHHHHHHHHHHHHhhC-CCcEEEE--ecCCCCHHHHHHHHHHHHh
Q 018253 83 DLVNMQIVNGAEGMIVGGTTG--EG------QLMSWDEHIMLIGHTVNCFG-ASVKVIG--NTGSNSTREAIHATEQGFA 151 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstG--E~------~~LT~~Er~~li~~~v~~~~-grvpVia--gvg~~st~~ai~la~~a~~ 151 (359)
+.++.+++.|+|+|.+..+.| +. +.... ...+..+.+.++ .++|||+ |+. +-.+.. .|.+
T Consensus 173 e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~---~~~l~~v~~~~~~~~ipvIa~GGI~--~g~di~----kAla 243 (351)
T 2c6q_A 173 EMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQ---LSAVMECADAAHGLKGHIISDGGCS--CPGDVA----KAFG 243 (351)
T ss_dssp HHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCH---HHHHHHHHHHHHHTTCEEEEESCCC--SHHHHH----HHHH
T ss_pred HHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccH---HHHHHHHHHHHhhcCCcEEEeCCCC--CHHHHH----HHHH
Confidence 345677899999998743222 11 01111 223333333332 2699999 665 344443 5667
Q ss_pred CCCCEEEEcCCCCC
Q 018253 152 VGMHAALHINPYYG 165 (359)
Q Consensus 152 ~Gadav~v~pP~y~ 165 (359)
+|||+|++-.|+..
T Consensus 244 lGA~~V~vG~~fl~ 257 (351)
T 2c6q_A 244 AGADFVMLGGMLAG 257 (351)
T ss_dssp TTCSEEEESTTTTT
T ss_pred cCCCceeccHHHhc
Confidence 99999999998864
No 341
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=76.25 E-value=10 Score=35.93 Aligned_cols=89 Identities=9% Similarity=-0.050 Sum_probs=57.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEc-cCccCcC-CCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHh
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVG-GTTGEGQ-LMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFA 151 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~-GstGE~~-~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~ 151 (359)
+..+.+....+++.|.+.|++.|-+- |.+.+.. .....-...+++.+.+.+ ++|||++=+=.+.+++ +.+.+
T Consensus 224 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e~a----~~~L~ 297 (340)
T 3gr7_A 224 DGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQA----EEILQ 297 (340)
T ss_dssp TSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHHHH----HHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHHHH----HHHHH
Confidence 44778889999999999999999885 4432210 001111345666666666 5898864333344444 44555
Q ss_pred CC-CCEEEEcCCCCCCCC
Q 018253 152 VG-MHAALHINPYYGKTS 168 (359)
Q Consensus 152 ~G-adav~v~pP~y~~~s 168 (359)
.| ||.|++.-+.+..|.
T Consensus 298 ~G~aD~V~iGR~~lanPd 315 (340)
T 3gr7_A 298 NGRADLVFLGRELLRNPY 315 (340)
T ss_dssp TTSCSEEEECHHHHHCTT
T ss_pred CCCeeEEEecHHHHhCch
Confidence 77 999999988776553
No 342
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=76.19 E-value=8.6 Score=37.80 Aligned_cols=96 Identities=20% Similarity=0.089 Sum_probs=73.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Ga 154 (359)
+.|.+-+.++++.+.+.|++-|.++-|.| .+++.+-.++++.+.+.. .+++=++. +++..-++..+..|.++||
T Consensus 176 r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG---~~~P~~v~~lv~~l~~~~--~~~i~~H~-Hnd~GlAvAN~laAv~aGa 249 (423)
T 3ivs_A 176 RSDLVDLLSLYKAVDKIGVNRVGIADTVG---CATPRQVYDLIRTLRGVV--SCDIECHF-HNDTGMAIANAYCALEAGA 249 (423)
T ss_dssp GSCHHHHHHHHHHHHHHCCSEEEEEETTS---CCCHHHHHHHHHHHHHHC--SSEEEEEE-BCTTSCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhCCCccccCCccC---cCCHHHHHHHHHHHHhhc--CCeEEEEE-CCCCchHHHHHHHHHHhCC
Confidence 47888899999999999999999999998 678999999999888765 35654444 5677888899999999999
Q ss_pred CEEEEcCCCC----CCCCHHHHHHHH
Q 018253 155 HAALHINPYY----GKTSLEGLISHF 176 (359)
Q Consensus 155 dav~v~pP~y----~~~s~~~l~~yf 176 (359)
+.+=..-=-+ ...+-++++...
T Consensus 250 ~~vd~ti~GlGERaGNa~Le~vv~~L 275 (423)
T 3ivs_A 250 THIDTSILGIGERNGITPLGALLARM 275 (423)
T ss_dssp CEEEEBGGGCSSTTCBCBHHHHHHHH
T ss_pred CEEEEecccccCcccchhHHHHHHHH
Confidence 9886654322 234556665443
No 343
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=76.07 E-value=8.7 Score=36.16 Aligned_cols=101 Identities=8% Similarity=-0.060 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEcc-CccC-cCCCCHHHHHHHHHHHHHhhCCCcEEEE-ecCCCCHHHHHHHHHHHHhCCCC
Q 018253 79 EAYDDLVNMQIVNGAEGMIVGG-TTGE-GQLMSWDEHIMLIGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 79 ~~l~~li~~li~~Gv~Gl~v~G-stGE-~~~LT~~Er~~li~~~v~~~~grvpVia-gvg~~st~~ai~la~~a~~~Gad 155 (359)
+...++...+++.|++-|-++| ||.- ...-|.+|-.++++.+.+.+ ++|+.+ .++ +.+---+-++.|.++|++
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~--~vplsI~DT~--~~~~~~~V~eaal~aga~ 149 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI--DVPLMIIGCG--VEEKDAEIFPVIGEALSG 149 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC--SSCEEEECCS--CHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC--CceEEEECCC--CCCCCHHHHHHHHHhCCC
Confidence 5778888899999999999999 4432 23478888888999988865 688887 554 466667778888889997
Q ss_pred ---EEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 156 ---AALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 156 ---av~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
-+--+.- . ..+ +-+..+++. .|+++-+.
T Consensus 150 ~k~iINdvs~---~-~~~---~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 150 RNCLLSSATK---D-NYK---PIVATCMVHGHSVVASAP 181 (310)
T ss_dssp SCCEEEEECT---T-THH---HHHHHHHHHTCEEEEECS
T ss_pred CCCEEEECCC---C-ccH---HHHHHHHHhCCCEEEECh
Confidence 3322211 1 222 233334443 79988763
No 344
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=75.96 E-value=48 Score=31.25 Aligned_cols=121 Identities=13% Similarity=-0.012 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHH-HhCCC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQG-FAVGM 154 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a-~~~Ga 154 (359)
|.+.+.+.++...+.|.+++=+-... +.++=.+.++.+++.++.++++.+-+ ++.+.++++++++.. ++.|+
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g~------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i 219 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKISG------EPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF 219 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECCS------CHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC
T ss_pred CHHHHHHHHHHHHHhChheEEeecCC------CHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC
Confidence 67888888888999999997664321 46666788888888887789998865 456899999999999 88887
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCeEEEeccC
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 219 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La--~~pnivGiK~ss 219 (359)
.+--|.. + .+.+++|.+. .||+.=. .-.+++.+.++. ..-+++-+|-+-
T Consensus 220 ---~iE~P~~---~----~~~~~~l~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 272 (371)
T 2ps2_A 220 ---ALEAPCA---T----WRECISLRRKTDIPIIYDE------LATNEMSIVKILADDAAEGIDLKISK 272 (371)
T ss_dssp ---EEECCBS---S----HHHHHHHHTTCCSCEEEST------TCCSHHHHHHHHHHTCCSEEEEEHHH
T ss_pred ---cCcCCcC---C----HHHHHHHHhhCCCCEEeCC------CcCCHHHHHHHHHhCCCCEEEechhh
Confidence 4555643 2 4566777765 5766532 235688888876 357899999753
No 345
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=75.71 E-value=40 Score=29.41 Aligned_cols=80 Identities=10% Similarity=-0.047 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCC--C
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG--M 154 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~G--a 154 (359)
++++-+..+++|++.|..-+.+.+..... ..+|.+-++.+.+..+-......-.+..+.+++.+.++...+.+ .
T Consensus 102 ~~~~g~~a~~~L~~~G~~~i~~i~~~~~~----~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 177 (280)
T 3gyb_A 102 DFRGAEIATKHLIDLGHTHIAHLRVGSGA----GLRRFESFEATMRAHGLEPLSNDYLGPAVEHAGYTETLALLKEHPEV 177 (280)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEECCSSHH----HHHHHHHHHHHHHHTTCCCEECCCCSCCCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEeCCCch----HHHHHHHHHHHHHHcCcCCCcccccCCCCHHHHHHHHHHHHhCCCCC
Confidence 46677888899999998877766655443 78888888888877654443223345567788888887776654 7
Q ss_pred CEEEEc
Q 018253 155 HAALHI 160 (359)
Q Consensus 155 dav~v~ 160 (359)
|+++..
T Consensus 178 ~ai~~~ 183 (280)
T 3gyb_A 178 TAIFSS 183 (280)
T ss_dssp CEEEES
T ss_pred CEEEEC
Confidence 787765
No 346
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=75.58 E-value=4.1 Score=37.92 Aligned_cols=109 Identities=17% Similarity=0.185 Sum_probs=67.7
Q ss_pred HHHCCCCEEEEccCccC----------------------cCCC-CHHHH----------HHHHHHHHHhhCCCcEEEE-e
Q 018253 88 QIVNGAEGMIVGGTTGE----------------------GQLM-SWDEH----------IMLIGHTVNCFGASVKVIG-N 133 (359)
Q Consensus 88 li~~Gv~Gl~v~GstGE----------------------~~~L-T~~Er----------~~li~~~v~~~~grvpVia-g 133 (359)
-++.|++= .+|||| -..| |.+|. .++++.+.+. .++||++ +
T Consensus 131 ri~eGA~m---IrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~--~~IPVV~IA 205 (291)
T 3o07_A 131 RINEGAAM---IRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEK--GKLPVVNFA 205 (291)
T ss_dssp HHHHTCSE---EEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHH--TSCSSCEEB
T ss_pred HHHCCCCE---EEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHc--cCCCEEEec
Confidence 35678874 578888 4456 77763 1456666554 4789864 4
Q ss_pred cCCC-CHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHHhc-C-C
Q 018253 134 TGSN-STREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTMAQ-S-P 210 (359)
Q Consensus 134 vg~~-st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~La~-~-p 210 (359)
-|.- +.+++.+.. +.|+|+||+..-.+...++....+.|.+..+. | -.|+.+.++++ + .
T Consensus 206 nGGI~TpedA~~~l----e~GaDGVmVGrAI~~s~DP~~~Akafv~Av~~-----~---------~~~~~~~~~s~~l~~ 267 (291)
T 3o07_A 206 AGGVATPADAALLM----QLGCDGVFVGSGIFKSSNPVRLATAVVEATTH-----F---------DNPSKLLEVSSDLGE 267 (291)
T ss_dssp CSSCCSHHHHHHHH----HTTCSCEEECGGGGGSSCHHHHHHHHHHHHHT-----T---------TCHHHHHHHHSSCCC
T ss_pred CCCCCCHHHHHHHH----HhCCCEEEEchHHhCCCCHHHHHHHHHHHHHh-----c---------cCHHHHHHHHhcccc
Confidence 4544 455555444 68999999998888778888888888776654 2 34678888874 3 4
Q ss_pred CeEEEeccC
Q 018253 211 NLAGVKECV 219 (359)
Q Consensus 211 nivGiK~ss 219 (359)
-.+|+-.++
T Consensus 268 ~m~g~~~~~ 276 (291)
T 3o07_A 268 LMGGVSIES 276 (291)
T ss_dssp C--------
T ss_pred cccCcchhh
Confidence 566665443
No 347
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=75.57 E-value=11 Score=36.26 Aligned_cols=87 Identities=14% Similarity=0.070 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccC----ccCcCCCCHHHHHHHHHHHHHhh-----CCCcEEEEecCC-CCHHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGT----TGEGQLMSWDEHIMLIGHTVNCF-----GASVKVIGNTGS-NSTREAIHAT 146 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~Gs----tGE~~~LT~~Er~~li~~~v~~~-----~grvpViagvg~-~st~~ai~la 146 (359)
+.+.+.+.++.+ ..+++.|-+|=| -|-...-+.+.-.++++.+.+.. ..++||++=+.- .+.++..+.+
T Consensus 162 ~~~dy~~~~~~~-~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia 240 (367)
T 3zwt_A 162 AAEDYAEGVRVL-GPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIA 240 (367)
T ss_dssp HHHHHHHHHHHH-GGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHH-hhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHH
Confidence 566777777765 456899998754 23222234445557777776541 136899987653 3556899999
Q ss_pred HHHHhCCCCEEEEcCCCC
Q 018253 147 EQGFAVGMHAALHINPYY 164 (359)
Q Consensus 147 ~~a~~~Gadav~v~pP~y 164 (359)
+.++++|+|++.+..-..
T Consensus 241 ~~~~~aGadgi~v~ntt~ 258 (367)
T 3zwt_A 241 SVVKELGIDGLIVTNTTV 258 (367)
T ss_dssp HHHHHHTCCEEEECCCBS
T ss_pred HHHHHcCCCEEEEeCCCc
Confidence 999999999999886543
No 348
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=75.50 E-value=43 Score=29.62 Aligned_cols=104 Identities=12% Similarity=0.041 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC--CC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV--GM 154 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~--Ga 154 (359)
|+++.+..+++|++.|..-|.+.+.... . +..+|.+-++.+.+..+-......-.+..+.+++.+.++...+. ..
T Consensus 110 ~~~~~~~a~~~L~~~G~~~I~~i~~~~~--~-~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 186 (289)
T 3k9c_A 110 DVAGITLAVDHLTELGHRNIAHIDGADA--P-GGADRRAGFLAAMDRHGLSASATVVTGGTTETEGAEGMHTLLEMPTPP 186 (289)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEECCTTS--T-THHHHHHHHHHHHHHTTCGGGEEEECCCSSHHHHHHHHHHHHTSSSCC
T ss_pred hHHHHHHHHHHHHHCCCCcEEEEeCCCC--c-cHHHHHHHHHHHHHHCCCCCCccEEECCCCHHHHHHHHHHHHcCCCCC
Confidence 4667788899999999887766665442 2 88999999988888765443222234567788888888877664 47
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc---CC----eEEEeC
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM---GP----TIIYNV 190 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a---~P----iiiYn~ 190 (359)
|+++.. +......-++.+.+. .| |+=||.
T Consensus 187 ~ai~~~-------~d~~A~g~~~al~~~g~~vP~di~vig~D~ 222 (289)
T 3k9c_A 187 TAVVAF-------NDRCATGVLDLLVRSGRDVPADISVVGYDD 222 (289)
T ss_dssp SEEEES-------SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred CEEEEC-------ChHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 787765 443333444444443 34 777774
No 349
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=75.46 E-value=17 Score=31.67 Aligned_cols=131 Identities=11% Similarity=0.075 Sum_probs=74.4
Q ss_pred CCCCHHHHHHHHHHHHHCC-CCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE------------ecCCCCHH
Q 018253 74 GRFDLEAYDDLVNMQIVNG-AEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG------------NTGSNSTR 140 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~G-v~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia------------gvg~~st~ 140 (359)
..-|.+...+.++.+++.+ ++|+++.+...+. +.+ .++.+.+ .++||+. .|+....+
T Consensus 40 ~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~---~~~----~~~~~~~---~~ipvV~~~~~~~~~~~~~~V~~d~~~ 109 (276)
T 3ksm_A 40 DDGDIAGQIQILSYHLSQAPPDALILAPNSAED---LTP----SVAQYRA---RNIPVLVVDSDLAGDAHQGLVATDNYA 109 (276)
T ss_dssp STTCHHHHHHHHHHHHHHSCCSEEEECCSSTTT---THH----HHHHHHH---TTCCEEEESSCCSSSCSSEEEECCHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHH---HHH----HHHHHHH---CCCcEEEEecCCCCCCcceEEccCHHH
Confidence 4567888899999999999 9999998864331 222 2222222 2455542 23344566
Q ss_pred HHHHHHHHHHhC----CCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC---CeEEEeCCCCCCCCCCH----HHHHHHh-c
Q 018253 141 EAIHATEQGFAV----GMHAALHINPYYGKTSLEGLISHFDSVLSMG---PTIIYNVPSRTGQDIPP----RVIHTMA-Q 208 (359)
Q Consensus 141 ~ai~la~~a~~~----Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~---PiiiYn~P~~tg~~ls~----e~l~~La-~ 208 (359)
.....+++..+. |..-+.++.......+..+-.+-|++..+.. ++. .... . +.+. +.+.++. +
T Consensus 110 ~g~~~~~~l~~~~~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~-~~~~--~--~~~~~~~~~~~~~~l~~ 184 (276)
T 3ksm_A 110 AGQLAARALLATLDLSKERNIALLRLRAGNASTDQREQGFLDVLRKHDKIRII-AAPY--A--GDDRGAARSEMLRLLKE 184 (276)
T ss_dssp HHHHHHHHHHHHSCTTSCEEEEECBCCTTCHHHHHHHHHHHHHHTTCTTEEEE-ECCB--C--CSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcCCCceEEEEEcCCCchhHHHHHHHHHHHHHhCCCcEEE-EEec--C--CCcHHHHHHHHHHHHHh
Confidence 677888888888 8888877754322223334444444444332 332 1111 1 2232 3455555 5
Q ss_pred CCCeEEEeccC
Q 018253 209 SPNLAGVKECV 219 (359)
Q Consensus 209 ~pnivGiK~ss 219 (359)
+|.+.+|=-.+
T Consensus 185 ~~~~~ai~~~~ 195 (276)
T 3ksm_A 185 TPTIDGLFTPN 195 (276)
T ss_dssp CSCCCEEECCS
T ss_pred CCCceEEEECC
Confidence 77777775443
No 350
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=75.40 E-value=7.2 Score=35.92 Aligned_cols=84 Identities=14% Similarity=0.050 Sum_probs=52.0
Q ss_pred HHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 018253 87 MQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGK 166 (359)
Q Consensus 87 ~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~ 166 (359)
+..+.|++-+-+++.....+..+.+. ++..++.++.++||++.-|=.+.+++ +.+.++|+|++++..-.+..
T Consensus 177 ~A~~~Gad~IGv~~r~l~~~~~dl~~----~~~l~~~v~~~~pvVaegGI~t~edv----~~l~~~GadgvlVGsal~~a 248 (272)
T 3qja_A 177 RALKAGAKVIGVNARDLMTLDVDRDC----FARIAPGLPSSVIRIAESGVRGTADL----LAYAGAGADAVLVGEGLVTS 248 (272)
T ss_dssp HHHHHTCSEEEEESBCTTTCCBCTTH----HHHHGGGSCTTSEEEEESCCCSHHHH----HHHHHTTCSEEEECHHHHTC
T ss_pred HHHHCCCCEEEECCCcccccccCHHH----HHHHHHhCcccCEEEEECCCCCHHHH----HHHHHcCCCEEEEcHHHhCC
Confidence 33456888887776544333333332 33334455557899986554445443 44567899999999887777
Q ss_pred CCHHHHHHHHHH
Q 018253 167 TSLEGLISHFDS 178 (359)
Q Consensus 167 ~s~~~l~~yf~~ 178 (359)
.+..+..+.|..
T Consensus 249 ~dp~~~~~~l~~ 260 (272)
T 3qja_A 249 GDPRAAVADLVT 260 (272)
T ss_dssp SCHHHHHHHHHT
T ss_pred CCHHHHHHHHHh
Confidence 776665555443
No 351
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=75.38 E-value=26 Score=32.91 Aligned_cols=77 Identities=17% Similarity=0.058 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCC--CHHH---HHHHHHHHHHhhCCCcEEEE-ecCC-CCHHHHHHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLM--SWDE---HIMLIGHTVNCFGASVKVIG-NTGS-NSTREAIHATEQ 148 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~L--T~~E---r~~li~~~v~~~~grvpVia-gvg~-~st~~ai~la~~ 148 (359)
.+.+.+.+.+ ...|+++|-++.+...-... ...+ ..++++.+++.+ ++||++ +++. .+ .+.++.
T Consensus 127 ~~~~~~~~~~---~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~~----~~~a~~ 197 (349)
T 1p0k_A 127 ATAAQAKEAV---EMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGMS----KASAGK 197 (349)
T ss_dssp CCHHHHHHHH---HHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCCC----HHHHHH
T ss_pred CCHHHHHHHH---HhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCCC----HHHHHH
Confidence 3444444433 34789999887664211000 0111 346676666655 579887 3322 23 456788
Q ss_pred HHhCCCCEEEEcC
Q 018253 149 GFAVGMHAALHIN 161 (359)
Q Consensus 149 a~~~Gadav~v~p 161 (359)
+.++|+|++.+..
T Consensus 198 a~~~Gad~I~v~~ 210 (349)
T 1p0k_A 198 LYEAGAAAVDIGG 210 (349)
T ss_dssp HHHHTCSEEEEEC
T ss_pred HHHcCCCEEEEcC
Confidence 8899999999974
No 352
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=75.36 E-value=58 Score=31.08 Aligned_cols=133 Identities=13% Similarity=0.072 Sum_probs=90.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccC----ccC------cCCC---CHHHHHHHHHHHHHhhCCCcEEEEec-CCCCH
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGT----TGE------GQLM---SWDEHIMLIGHTVNCFGASVKVIGNT-GSNST 139 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~Gs----tGE------~~~L---T~~Er~~li~~~v~~~~grvpViagv-g~~st 139 (359)
...|.+.+.+.+....+.|.+++=+-.. .|- +..- ..++=.+.++.+++.++.++++++-+ ++.+.
T Consensus 149 ~~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 228 (407)
T 2o56_A 149 MLTEPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDT 228 (407)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 4468899999999999999999876431 121 0011 12444577888888888889999865 45689
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEE
Q 018253 140 REAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGV 215 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGi 215 (359)
++++++++..++.|.+.+ --|.- +. -.+.+++|.+. .||+.=. .-.+++.++++.+ .-+++-+
T Consensus 229 ~~a~~~~~~l~~~~i~~i--E~P~~--~~---~~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 229 TSAIQFGRMIEELGIFYY--EEPVM--PL---NPAQMKQVADKVNIPLAAGE------RIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp HHHHHHHHHHGGGCCSCE--ECSSC--SS---SHHHHHHHHHHCCSCEEECT------TCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHHHHhcCCCEE--eCCCC--hh---hHHHHHHHHHhCCCCEEeCC------CcCCHHHHHHHHHcCCCCEEec
Confidence 999999999999998753 33431 11 14556667665 5776532 1235788888873 5689999
Q ss_pred eccC
Q 018253 216 KECV 219 (359)
Q Consensus 216 K~ss 219 (359)
|-+-
T Consensus 296 k~~~ 299 (407)
T 2o56_A 296 DICT 299 (407)
T ss_dssp CTTT
T ss_pred Cccc
Confidence 9754
No 353
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=75.20 E-value=59 Score=31.05 Aligned_cols=127 Identities=8% Similarity=-0.049 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccC-ccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecC-CC--CHHHHHHHHHHHHhC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGT-TGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG-SN--STREAIHATEQGFAV 152 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~Gs-tGE~~~LT~~Er~~li~~~v~~~~grvpViagvg-~~--st~~ai~la~~a~~~ 152 (359)
|.+.+.+.+....+.|.+++=+-++ .|- .+ .++-.++++.+++.++.++++.+-+. +. +.++++++++..++.
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~spvG~--~~-~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~ 221 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGPIGR--GT-VAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAA 221 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTTTTS--SC-HHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCCCCC--CH-HHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhc
Confidence 7788889999999999999876421 121 22 15556788888888888899998664 55 789999999999999
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHh-c--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCeEEEeccC
Q 018253 153 GMHAALHINPYYGKTSLEGLISHFDSVLS-M--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 219 (359)
Q Consensus 153 Gadav~v~pP~y~~~s~~~l~~yf~~Ia~-a--~PiiiYn~P~~tg~~ls~e~l~~La--~~pnivGiK~ss 219 (359)
|++.+ --|+- +. -.+.+++|.+ . .||+.=. .-.+++.+.++. ..-+++-+|-+-
T Consensus 222 ~i~~i--EqP~~--~~---d~~~~~~l~~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 280 (401)
T 2hzg_A 222 GVLWL--EEPFD--AG---ALAAHAALAGRGARVRIAGGE------AAHNFHMAQHLMDYGRIGFIQIDCGR 280 (401)
T ss_dssp TCSEE--ECCSC--TT---CHHHHHHHHTTCCSSEEEECT------TCSSHHHHHHHHHHSCCSEEEECHHH
T ss_pred CCCEE--ECCCC--cc---CHHHHHHHHhhCCCCCEEecC------CcCCHHHHHHHHHCCCCCEEEeCcch
Confidence 99854 44542 11 1556677777 5 4665432 235678888887 357899999653
No 354
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=75.18 E-value=19 Score=35.86 Aligned_cols=77 Identities=16% Similarity=0.199 Sum_probs=45.0
Q ss_pred HHHHHHHCCCCEEEEccCccCc--------CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCC
Q 018253 84 LVNMQIVNGAEGMIVGGTTGEG--------QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~GstGE~--------~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gad 155 (359)
.++.+.+.|+++|.+....|-. ......--...+..+.+.. ++|||+.=|=.+..++.+ |.++|||
T Consensus 309 ~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~ipVia~GGI~~~~di~k----ala~GAd 382 (514)
T 1jcn_A 309 QAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GVPIIADGGIQTVGHVVK----ALALGAS 382 (514)
T ss_dssp HHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TCCEEEESCCCSHHHHHH----HHHTTCS
T ss_pred HHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC--CCCEEEECCCCCHHHHHH----HHHcCCC
Confidence 4667788999999983222210 1111233344444444444 589998323224455443 4458999
Q ss_pred EEEEcCCCCCC
Q 018253 156 AALHINPYYGK 166 (359)
Q Consensus 156 av~v~pP~y~~ 166 (359)
+|++..++...
T Consensus 383 ~V~iG~~~l~~ 393 (514)
T 1jcn_A 383 TVMMGSLLAAT 393 (514)
T ss_dssp EEEESTTTTTS
T ss_pred eeeECHHHHcC
Confidence 99999987643
No 355
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=75.07 E-value=3.8 Score=39.31 Aligned_cols=89 Identities=8% Similarity=-0.097 Sum_probs=56.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCc-cCcCCC--CHHHHHHHHHHHHHhhCCCcEEEEecCCC-CHHHHHHHHHH
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTT-GEGQLM--SWDEHIMLIGHTVNCFGASVKVIGNTGSN-STREAIHATEQ 148 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~Gst-GE~~~L--T~~Er~~li~~~v~~~~grvpViagvg~~-st~~ai~la~~ 148 (359)
.|+.+.+....+++.|.+.|++.|-+-+.+ .+.... .......+++.+.+.+ ++|||+ +|.. +.++ ++.
T Consensus 240 ~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~-~GgI~s~e~----a~~ 312 (363)
T 3l5l_A 240 RDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA--KLPVTS-AWGFGTPQL----AEA 312 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCCEEE-CSSTTSHHH----HHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc--CCcEEE-eCCCCCHHH----HHH
Confidence 344778889999999999999998876532 211111 1111345666666666 578886 4544 4443 344
Q ss_pred HHhCC-CCEEEEcCCCCCCCC
Q 018253 149 GFAVG-MHAALHINPYYGKTS 168 (359)
Q Consensus 149 a~~~G-adav~v~pP~y~~~s 168 (359)
+.+.| ||.|++.-++...|.
T Consensus 313 ~l~~G~aD~V~iGR~~lanPd 333 (363)
T 3l5l_A 313 ALQANQLDLVSVGRAHLADPH 333 (363)
T ss_dssp HHHTTSCSEEECCHHHHHCTT
T ss_pred HHHCCCccEEEecHHHHhCch
Confidence 55577 999999877765554
No 356
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=74.86 E-value=6.6 Score=36.58 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=81.5
Q ss_pred EEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccC-cc-----Cc--CCCCHHHHHHHHHHHHHhhCCCcEEEEec
Q 018253 63 ITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGT-TG-----EG--QLMSWDEHIMLIGHTVNCFGASVKVIGNT 134 (359)
Q Consensus 63 ~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~Gs-tG-----E~--~~LT~~Er~~li~~~v~~~~grvpViagv 134 (359)
...++|.+| ....++++ +.|++.+++.|+ .+ -- -.+|.+|....++.+.+.+ ++||++-.
T Consensus 22 ~i~~~~a~D-------~~sA~i~e---~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~--~~PviaD~ 89 (287)
T 3b8i_A 22 CYHTASVFD-------PMSARIAA---DLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVA--RLPVIADA 89 (287)
T ss_dssp CEECEECCS-------HHHHHHHH---HTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTC--SSCEEEEC
T ss_pred cEEEecCCC-------HHHHHHHH---HcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEEEC
Confidence 345678876 34455554 479999999988 33 21 3689999999988887765 47998843
Q ss_pred --CCCCHHHHHHHHHHHHhCCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHhc---CCeEEE
Q 018253 135 --GSNSTREAIHATEQGFAVGMHAALHINPYYG---------KTSLEGLISHFDSVLSM---GPTIIY 188 (359)
Q Consensus 135 --g~~st~~ai~la~~a~~~Gadav~v~pP~y~---------~~s~~~l~~yf~~Ia~a---~PiiiY 188 (359)
|-.+..++.+.++...++||+++-+---... -.+.++..+-.+.+.++ .+++|.
T Consensus 90 d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~ 157 (287)
T 3b8i_A 90 DHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTII 157 (287)
T ss_dssp TTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEE
Confidence 3238999999999999999999998654321 13567788888888776 245544
No 357
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=74.84 E-value=8.4 Score=34.60 Aligned_cols=137 Identities=11% Similarity=0.143 Sum_probs=80.1
Q ss_pred EeeecCCCCCC---CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCH-
Q 018253 64 TAIKTPYLPDG---RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST- 139 (359)
Q Consensus 64 ~al~TPF~~dg---~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st- 139 (359)
-+++=|=..|. +.+++.+.+-++.+.+.|++||+++.-|-++ .+..+--++|++. +. ..+|..+=.-..+
T Consensus 58 ~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg-~iD~~~~~~Li~~----a~-~~~vTFHRAFD~~~ 131 (224)
T 2bdq_A 58 AVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNN-HIDTEAIEQLLPA----TQ-GLPLVFHMAFDVIP 131 (224)
T ss_dssp EEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-SBCHHHHHHHHHH----HT-TCCEEECGGGGGSC
T ss_pred EEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC-CcCHHHHHHHHHH----hC-CCeEEEECchhccC
Confidence 34555633332 3567778888889999999999877777666 4566555555543 33 4688876432223
Q ss_pred -HHHHHHHHHHHhCCCCEEEEcCCCCCCCC--HHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc---CCC
Q 018253 140 -REAIHATEQGFAVGMHAALHINPYYGKTS--LEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ---SPN 211 (359)
Q Consensus 140 -~~ai~la~~a~~~Gadav~v~pP~y~~~s--~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~---~pn 211 (359)
.+..+..+...++|++.|+-.- ...+ -.+-....+++.+. ..|.|- .|-.++++-+.+|.+ ...
T Consensus 132 ~~d~~~ale~L~~lGv~rILTSG---~~~~~~a~~g~~~L~~Lv~~a~~ri~Im-----~GgGV~~~Ni~~l~~~tGv~e 203 (224)
T 2bdq_A 132 KSDQKKSIDQLVALGFTRILLHG---SSNGEPIIENIKHIKALVEYANNRIEIM-----VGGGVTAENYQYICQETGVKQ 203 (224)
T ss_dssp TTTHHHHHHHHHHTTCCEEEECS---CSSCCCGGGGHHHHHHHHHHHTTSSEEE-----ECSSCCTTTHHHHHHHHTCCE
T ss_pred CcCHHHHHHHHHHcCCCEEECCC---CCCCCcHHHHHHHHHHHHHhhCCCeEEE-----eCCCCCHHHHHHHHHhhCCCE
Confidence 4455566777788999999642 2222 33334444445432 223222 244566666666652 444
Q ss_pred eEE
Q 018253 212 LAG 214 (359)
Q Consensus 212 ivG 214 (359)
+-+
T Consensus 204 ~H~ 206 (224)
T 2bdq_A 204 AHG 206 (224)
T ss_dssp EEE
T ss_pred Ecc
Confidence 444
No 358
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=74.74 E-value=4.6 Score=36.88 Aligned_cols=71 Identities=13% Similarity=0.117 Sum_probs=52.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCCC---CCCCHHHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 135 GSNSTREAIHATEQGFAVGMHAALHINPYY---GKTSLEGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 135 g~~st~~ai~la~~a~~~Gadav~v~pP~y---~~~s~~~l~~yf~~Ia~a-----~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
|+.+.++++++++.|.+.|.+.+.+++-+. +..+.+.+.++++++.+. .||-|+- -.=+.+.++....|
T Consensus 15 G~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~---G~Ev~~~~~~~~~l 91 (262)
T 3qy7_A 15 GAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLP---GQEIRIYGEVEQDL 91 (262)
T ss_dssp SCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEEC---CCEEECCTTHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEec---CeEEecchhHHHHH
Confidence 567899999999999999999998887653 234678899999888653 4776662 12234667777777
Q ss_pred hc
Q 018253 207 AQ 208 (359)
Q Consensus 207 a~ 208 (359)
.+
T Consensus 92 ~~ 93 (262)
T 3qy7_A 92 AK 93 (262)
T ss_dssp HT
T ss_pred hc
Confidence 64
No 359
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=74.68 E-value=12 Score=34.91 Aligned_cols=107 Identities=7% Similarity=0.020 Sum_probs=62.3
Q ss_pred HHHHHHHHCCCCEEEEccCccC-cCCC-CHHH--------HHHHHHHHHHhhCCCcEEEEecCCC---CHHHHHHHHHHH
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGE-GQLM-SWDE--------HIMLIGHTVNCFGASVKVIGNTGSN---STREAIHATEQG 149 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE-~~~L-T~~E--------r~~li~~~v~~~~grvpViagvg~~---st~~ai~la~~a 149 (359)
.+++.+-+.||+..++.++..- .+.+ ..++ -..+. .+++...+|..-++.+--. +.+++++..+++
T Consensus 53 ~~l~~md~~GV~~~vl~~~~~~~~~~~~~~~~~~~~~~~~N~~~~-~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~ 131 (350)
T 2gwg_A 53 NQLKKMQERGSDLTVFSPRASFMAHHIGDFNVSSTWAAICNELCY-RVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKC 131 (350)
T ss_dssp THHHHHHHHTCCEEEEECCC-------CCHHHHHHHHHHHHHHHH-HHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCchhhccccCCHHHHHHHHHHHHHHHH-HHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 5677788899999888876532 1112 2222 12223 2333345564444444311 346677777776
Q ss_pred H-hCCCCEEEEcCC---CCC---CCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 150 F-AVGMHAALHINP---YYG---KTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 150 ~-~~Gadav~v~pP---~y~---~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
. +.|+.+|-+-+- +|+ ..+.+.+...|+...+. +||+++--
T Consensus 132 ~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~ 180 (350)
T 2gwg_A 132 VKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVS 180 (350)
T ss_dssp HHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCC
T ss_pred HhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCC
Confidence 6 789999966443 221 24556778888877775 89998754
No 360
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=74.60 E-value=9.2 Score=36.80 Aligned_cols=67 Identities=16% Similarity=0.137 Sum_probs=40.2
Q ss_pred HHHHHHHHCCCCEEEEccCc--cCcCC--CCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEE
Q 018253 83 DLVNMQIVNGAEGMIVGGTT--GEGQL--MSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAAL 158 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~Gst--GE~~~--LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~ 158 (359)
...+.+.+.|++.+.+.++. .|+.. ++++ . ++.+++.+ ++||++|-. .+.++ ++.+.++|+|++.
T Consensus 169 e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~---~-i~~l~~~~--~~pvi~ggi-~t~e~----a~~~~~~Gad~i~ 237 (393)
T 2qr6_A 169 EIAPIVIKAGADLLVIQGTLISAEHVNTGGEAL---N-LKEFIGSL--DVPVIAGGV-NDYTT----ALHMMRTGAVGII 237 (393)
T ss_dssp HHHHHHHHTTCSEEEEECSSCCSSCCCC--------C-HHHHHHHC--SSCEEEECC-CSHHH----HHHHHTTTCSEEE
T ss_pred HHHHHHHHCCCCEEEEeCCccccccCCCcccHH---H-HHHHHHhc--CCCEEECCc-CCHHH----HHHHHHcCCCEEE
Confidence 34455567899998877654 33221 2333 2 33444544 689998532 34444 6777789999999
Q ss_pred Ec
Q 018253 159 HI 160 (359)
Q Consensus 159 v~ 160 (359)
+.
T Consensus 238 vg 239 (393)
T 2qr6_A 238 VG 239 (393)
T ss_dssp ES
T ss_pred EC
Confidence 94
No 361
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=74.27 E-value=21 Score=34.81 Aligned_cols=115 Identities=7% Similarity=-0.049 Sum_probs=71.6
Q ss_pred ceEEeeecCCCCC-CCCCHHH----HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018253 61 RLITAIKTPYLPD-GRFDLEA----YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG 135 (359)
Q Consensus 61 Gi~~al~TPF~~d-g~ID~~~----l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg 135 (359)
.++...+-|+..- +.++++. ++..++.|++.|||.|++ |- .-+..|-+.+++.+.+ . .+||++.++
T Consensus 116 ~~VAGsIGP~g~~l~~~s~eel~~~~~eqi~~L~~~GvDlll~-----ET-i~~~~Eakaa~~a~~~-~--~lPv~iS~T 186 (406)
T 1lt8_A 116 ALVAGGVSQTPSYLSAKSETEVKKVFLQQLEVFMKKNVDFLIA-----EY-FEHVEEAVWAVETLIA-S--GKPVAATMA 186 (406)
T ss_dssp CEEEEEECCCHHHHTTCHHHHHHHHHHHHHHHHHHHTCSEEEE-----CC-CSCHHHHHHHHHHHGG-G--TSCEEEEEC
T ss_pred CEEEEEcCCcccccCCCCHHHHHHHHHHHHHHHhhCCCCEEEE-----cc-cCCHHHHHHHHHHHHH-h--CCcEEEEEE
Confidence 4666677777531 3466665 445677778899998774 21 2245676666655543 3 379888654
Q ss_pred C--------CCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHh-------cCCeEEEeCC
Q 018253 136 S--------NSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS-------MGPTIIYNVP 191 (359)
Q Consensus 136 ~--------~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~-------a~PiiiYn~P 191 (359)
- .++.++ +..+.+.|+++|.+=- ...++.+..+.+.+.+ ..|+++|-+.
T Consensus 187 ~~~~G~l~G~~~~~~---~~~l~~~~~~avGvNC----~~gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNa 250 (406)
T 1lt8_A 187 IGPEGDLHGVPPGEA---AVRLVKAGASIIGVNC----HFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLA 250 (406)
T ss_dssp CBTTBCTTCCCHHHH---HHHHHTTTCSEEEEES----SSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCS
T ss_pred ECCCCCcCCCcHHHH---HHHhhcCCCCEEEecC----CCCHHHHHHHHHHHHHhhhhcCCCccEEEecCC
Confidence 2 234444 4444557888887743 1346777777777764 2589999764
No 362
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=74.24 E-value=16 Score=30.54 Aligned_cols=86 Identities=14% Similarity=0.139 Sum_probs=47.7
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
.+.+++...+.+++-+.+..+.+. +.+.-.++++...+.-..+++|++| |...+++. ..+.+.|+|++..
T Consensus 58 ~e~lv~aa~~~~~diV~lS~~~~~----~~~~~~~~i~~L~~~g~~~i~v~vG-G~~~~~~~----~~l~~~G~d~v~~- 127 (161)
T 2yxb_A 58 PEQVAMAAVQEDVDVIGVSILNGA----HLHLMKRLMAKLRELGADDIPVVLG-GTIPIPDL----EPLRSLGIREIFL- 127 (161)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSC----HHHHHHHHHHHHHHTTCTTSCEEEE-ECCCHHHH----HHHHHTTCCEEEC-
T ss_pred HHHHHHHHHhcCCCEEEEEeechh----hHHHHHHHHHHHHhcCCCCCEEEEe-CCCchhcH----HHHHHCCCcEEEC-
Confidence 345566666777887777666552 4555666666665532235777775 23333321 2356688886542
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 018253 161 NPYYGKTSLEGLISHFDSVL 180 (359)
Q Consensus 161 pP~y~~~s~~~l~~yf~~Ia 180 (359)
| ..+.++.+++.+.+.
T Consensus 128 -~---~~~~~~~~~~~~~~~ 143 (161)
T 2yxb_A 128 -P---GTSLGEIIEKVRKLA 143 (161)
T ss_dssp -T---TCCHHHHHHHHHHHH
T ss_pred -C---CCCHHHHHHHHHHHH
Confidence 1 123455566665554
No 363
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=73.96 E-value=9.3 Score=37.39 Aligned_cols=109 Identities=10% Similarity=-0.035 Sum_probs=67.2
Q ss_pred HHHHHHHHHHCCCCEEEEccCcc----CcCCCCHHHHHHH----HHHHHHhhC-----CCcEEEEecCCCCHHHHHHHHH
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTG----EGQLMSWDEHIML----IGHTVNCFG-----ASVKVIGNTGSNSTREAIHATE 147 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstG----E~~~LT~~Er~~l----i~~~v~~~~-----grvpViagvg~~st~~ai~la~ 147 (359)
.+..++.+-+.||+.-++..+.+ +.+....++...+ -+.+.+.+. +|.--++.+.-...+.+++..+
T Consensus 103 ~e~rl~~MD~~GId~~Vl~p~~~~~~~~~~~~d~e~a~~~~r~~Nd~lae~~~~~~P~~Rf~g~a~v~~~d~~~a~~EL~ 182 (423)
T 4dzi_A 103 RDARIAVMDEQDIETAFMLPTFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDHRIIAAPIVSLADPTRAVEEVD 182 (423)
T ss_dssp HHHHHHHHHHHTEEEEEEECSGGGGHHHHTTTCHHHHHHHHHHHHHHHHHHTCSSCTTCCEEECCBCCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEECCCchhhccccccCCHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCCccCHHHHHHHHH
Confidence 34456666678999766666543 2223344444343 333344443 4532233333334788999999
Q ss_pred HHHhCCCCEEEEcCC----CC--CCCCHHHHHHHHHHHHhc-CCeEEEe
Q 018253 148 QGFAVGMHAALHINP----YY--GKTSLEGLISHFDSVLSM-GPTIIYN 189 (359)
Q Consensus 148 ~a~~~Gadav~v~pP----~y--~~~s~~~l~~yf~~Ia~a-~PiiiYn 189 (359)
++.+.|+.++.+.|- .+ ..++.+.+...|+.+.+. .||+++-
T Consensus 183 r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~ 231 (423)
T 4dzi_A 183 FVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHL 231 (423)
T ss_dssp HHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEEC
T ss_pred HHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeC
Confidence 999999999987541 11 124557788899988886 7988884
No 364
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=73.86 E-value=16 Score=34.76 Aligned_cols=73 Identities=16% Similarity=0.236 Sum_probs=45.2
Q ss_pred HHHHHHHCCCCEEEEcc-----CccCcCC--------CCHHHHHHHHHHHHHhhCCCcEEEEecCCC-CHHHHHHHHHHH
Q 018253 84 LVNMQIVNGAEGMIVGG-----TTGEGQL--------MSWDEHIMLIGHTVNCFGASVKVIGNTGSN-STREAIHATEQG 149 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~G-----stGE~~~--------LT~~Er~~li~~~v~~~~grvpViagvg~~-st~~ai~la~~a 149 (359)
.+....+.|+|.|.+-| .+|.+.. +. ...+++.+.+.+ ++|||+ .|+- +.+++.+ +
T Consensus 157 ~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~---~~~~l~~i~~~~--~iPVia-aGGI~~~~~~~~----~ 226 (369)
T 3bw2_A 157 EARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIG---LLSLLAQVREAV--DIPVVA-AGGIMRGGQIAA----V 226 (369)
T ss_dssp HHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCC---HHHHHHHHHHHC--SSCEEE-ESSCCSHHHHHH----H
T ss_pred HHHHHHHcCCCEEEEeCCCcCCcCCCccccccccccccc---HHHHHHHHHHhc--CceEEE-ECCCCCHHHHHH----H
Confidence 34567789999999943 3455422 22 245566665554 689886 3444 4444333 3
Q ss_pred HhCCCCEEEEcCCCCCC
Q 018253 150 FAVGMHAALHINPYYGK 166 (359)
Q Consensus 150 ~~~Gadav~v~pP~y~~ 166 (359)
.++|||+|++...+...
T Consensus 227 l~~GAd~V~vGs~~~~~ 243 (369)
T 3bw2_A 227 LAAGADAAQLGTAFLAT 243 (369)
T ss_dssp HHTTCSEEEESHHHHTS
T ss_pred HHcCCCEEEEChHHhCC
Confidence 44899999998776543
No 365
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=73.77 E-value=41 Score=31.86 Aligned_cols=121 Identities=8% Similarity=-0.082 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Gad 155 (359)
|.+.+.+.+...++.|.+++=+-...+ +.++=.+.++.+++.++.++++.+-+ ++.+.++++++++..+ .|+
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~-----~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~-~~i- 217 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGS-----DPAQDIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVR-ARD- 217 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSS-----CHHHHHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCC-CCC-
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCC-----ChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhC-CCc-
Confidence 668888888888899999887754332 45666788888888888789988865 3568899999999887 766
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCeEEEeccC
Q 018253 156 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 219 (359)
Q Consensus 156 av~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La--~~pnivGiK~ss 219 (359)
++--|+. + .+.++++.+. .||+.=. .-.+++.+.++. ..-+++-+|-+-
T Consensus 218 --~iEqP~~---d----~~~~~~l~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 270 (378)
T 2qdd_A 218 --WIEQPCQ---T----LDQCAHVARRVANPIMLDE------CLHEFSDHLAAWSRGACEGVKIKPNR 270 (378)
T ss_dssp --EEECCSS---S----HHHHHHHHTTCCSCEEECT------TCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred --EEEcCCC---C----HHHHHHHHHhCCCCEEECC------CcCCHHHHHHHHHhCCCCEEEecccc
Confidence 5566653 2 4556667765 5766532 234678888877 357899999753
No 366
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=73.69 E-value=59 Score=31.32 Aligned_cols=151 Identities=9% Similarity=0.007 Sum_probs=100.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCC---HHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHH
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMS---WDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGF 150 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT---~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~ 150 (359)
.-+.+.+.+.++.+++.|.+.+=+.|..+.....+ .++=.+.++.+++.++.++++++-. ++.+.++++++++..+
T Consensus 123 ~~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~ 202 (405)
T 3rr1_A 123 GDRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELE 202 (405)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHH
Confidence 45678999999999999999987755433222222 3445778888888888889999865 4568999999999999
Q ss_pred hCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC--chh--
Q 018253 151 AVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND-- 222 (359)
Q Consensus 151 ~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss--~d~-- 222 (359)
+.|.+.+= -|.- +. + .+.+++|.+. .||+.=. .-.+++.+.++.+ .-.++-+|-+- |-.
T Consensus 203 ~~~i~~iE--eP~~--~~--d-~~~~~~l~~~~~iPIa~dE------~i~~~~~~~~~l~~~a~d~v~~d~~~~GGitea 269 (405)
T 3rr1_A 203 PYRPLFIE--EPVL--AE--Q-AETYARLAAHTHLPIAAGE------RMFSRFDFKRVLEAGGVSILQPDLSHAGGITEC 269 (405)
T ss_dssp GGCCSCEE--CSSC--CS--S-THHHHHHHTTCSSCEEECT------TCCSHHHHHHHHHHCCCSEECCBTTTTTHHHHH
T ss_pred hcCCCEEE--CCCC--cc--c-HHHHHHHHhcCCCCEEecC------CcCCHHHHHHHHHHhCCCeEEEChhhcCCHHHH
Confidence 99987553 3431 11 1 3556777775 5776432 2356788888863 56788898754 222
Q ss_pred -hHhhhh-CCceEEEecC
Q 018253 223 -RVEHYT-GNGIVVWSGN 238 (359)
Q Consensus 223 -~l~~~~-~~~~~v~~G~ 238 (359)
++.+++ .-++.+..+.
T Consensus 270 ~kia~lA~~~gi~v~~h~ 287 (405)
T 3rr1_A 270 VKIAAMAEAYDVALAPHC 287 (405)
T ss_dssp HHHHHHHHTTTCEECCBC
T ss_pred HHHHHHHHHcCCEEEeCC
Confidence 343332 3456665554
No 367
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=73.62 E-value=8.3 Score=34.23 Aligned_cols=96 Identities=14% Similarity=0.050 Sum_probs=58.2
Q ss_pred eecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEE-EecCCC--CHHHH
Q 018253 66 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNTGSN--STREA 142 (359)
Q Consensus 66 l~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVi-agvg~~--st~~a 142 (359)
++|-++..+.. .+...++++.-.+.|++|+++.++- .+..+ .+.+..+. ..++ -|++.. +
T Consensus 103 vLts~s~~~~~-~~~v~~~a~~a~~~G~~GvV~sat~--------~~e~~---~ir~~~~~-f~~v~pGI~~~g~~---- 165 (215)
T 3ve9_A 103 LVLSMSHPGWN-DAFYPYLREVARRVNPKGFVAPATR--------PSMIS---RVKGDFPD-KLVISPGVGTQGAK---- 165 (215)
T ss_dssp EECCCSSTTCC-GGGHHHHHHHHHHHCCSEEECCTTS--------HHHHH---HHHHHCTT-SEEEECCTTSTTCC----
T ss_pred EEEecCCcchH-HHHHHHHHHHHHHcCCCceeeCCCC--------HHHHH---HHHHhCCC-cEEEcCCCCcCcCC----
Confidence 66777665544 4556667776677899998864431 22222 23344444 3333 488754 3
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCCCCCHHHH-HHHHHHHHh
Q 018253 143 IHATEQGFAVGMHAALHINPYYGKTSLEGL-ISHFDSVLS 181 (359)
Q Consensus 143 i~la~~a~~~Gadav~v~pP~y~~~s~~~l-~~yf~~Ia~ 181 (359)
.+.+.+.|+|.+++--|.|...++.+. .++.+++.+
T Consensus 166 ---~~~a~~~Gad~iVvGr~I~~a~dp~~a~~~i~~~i~~ 202 (215)
T 3ve9_A 166 ---PGIALCHGADYEIVGRSVYQSADPVRKLEEIVRSQEE 202 (215)
T ss_dssp ---TTHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHHH
T ss_pred ---HHHHHHcCCCEEEeCHHHcCCCCHHHHHHHHHHHHHH
Confidence 335556899999988888877776544 444444443
No 368
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=73.41 E-value=64 Score=30.67 Aligned_cols=126 Identities=8% Similarity=-0.034 Sum_probs=90.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
.+.+.+.+.++.+++.|.+.+=+-...+ +.++=.+.++.+++.++.++++.+-+ ++.+.++++++++..++.|.
T Consensus 164 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-----~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i 238 (392)
T 1tzz_A 164 KGLSMLRGEMRGYLDRGYNVVKMKIGGA-----PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPL 238 (392)
T ss_dssp -CHHHHHHHHHHHHTTTCSEEEEECSSS-----CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCC-----CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4778888889999999999887654322 35666788888888888889998865 45689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc------CCCeEEEeccC
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ------SPNLAGVKECV 219 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~------~pnivGiK~ss 219 (359)
+.+ --|.. + +-.+.+++|.+. .||+.=. .-.+++.+.++.+ .-+++-+|-+-
T Consensus 239 ~~i--EqP~~--~---~d~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~ 298 (392)
T 1tzz_A 239 FWY--EEVGD--P---LDYALQAALAEFYPGPMATGE------NLFSHQDARNLLRYGGMRPDRDWLQFDCAL 298 (392)
T ss_dssp SEE--ECCSC--T---TCHHHHHHHTTTCCSCEEECT------TCCSHHHHHHHHHHSCCCTTTCEECCCTTT
T ss_pred Cee--cCCCC--h---hhHHHHHHHHhhCCCCEEECC------CCCCHHHHHHHHHcCCCccCCcEEEECccc
Confidence 853 44532 1 125566777765 5766532 2256788888764 46788888653
No 369
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=73.40 E-value=38 Score=31.08 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=16.8
Q ss_pred CcEEEEec----CCCCHHHHHHHHHHHHhCCCCEE
Q 018253 127 SVKVIGNT----GSNSTREAIHATEQGFAVGMHAA 157 (359)
Q Consensus 127 rvpViagv----g~~st~~ai~la~~a~~~Gadav 157 (359)
+++||+.- +..+.++.++..+.+++.|||-+
T Consensus 159 ~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIv 193 (276)
T 3o1n_A 159 NVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIP 193 (276)
T ss_dssp TCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEE
Confidence 45555532 23345556666666666666655
No 370
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=73.38 E-value=6.2 Score=36.34 Aligned_cols=100 Identities=9% Similarity=0.050 Sum_probs=61.8
Q ss_pred CceEEeeecCCCCCCCCCHHHHHHHHHHHHH---CCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-ecC
Q 018253 60 LRLITAIKTPYLPDGRFDLEAYDDLVNMQIV---NGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-NTG 135 (359)
Q Consensus 60 ~Gi~~al~TPF~~dg~ID~~~l~~li~~li~---~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-gvg 135 (359)
+|++ ++|=++..|.+....+...+-.+.. .|++|+++-++ |.. +..+.+..++. ||+
T Consensus 145 ~~ll--lla~mss~~~l~~~~~~~~v~~~A~~a~~g~dGvV~s~~--~~~---------------~~~g~~f~~vTPGIr 205 (267)
T 3gdm_A 145 RGLL--MLAELSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQRD--MGG---------------RDEGYDWLIMTPGVG 205 (267)
T ss_dssp CEEE--EECSCCSTTCCCCHHHHHHHHHHHTTCTTTEEEEECSSC--CCC---------------GGGTCCCEEEECSEE
T ss_pred CCeE--EEEEcCCccccccCCHHHHHHHHHHHHhcCCCeEEeCcc--chh---------------hccCCCCEEECCCcC
Confidence 4544 4667777777665566666665554 28999886664 421 33454554443 775
Q ss_pred C----CCHHHHHHHHHHHHhCCCCEEEEcCCCCC-CCCHHHHHHHHHH
Q 018253 136 S----NSTREAIHATEQGFAVGMHAALHINPYYG-KTSLEGLISHFDS 178 (359)
Q Consensus 136 ~----~st~~ai~la~~a~~~Gadav~v~pP~y~-~~s~~~l~~yf~~ 178 (359)
- .+..|.-+--..|.+.|+|.++|--|.|. ..++.+..+-|++
T Consensus 206 ~~~~g~~~gdQ~rTP~~Ai~~GaD~iVVGRpI~~~a~dP~~aa~~i~~ 253 (267)
T 3gdm_A 206 LDDKGDALGQQYRTVDDVVSTGSDIIIVGRGLFAKGRDAKVEGERYRK 253 (267)
T ss_dssp CCCTTCTTGGGSEEHHHHHHTTCSEEEECGGGTSTTCCHHHHHHHHHH
T ss_pred CCcCCCccccCCCCHHHHHHcCCCEEEEChhhccCCCCHHHHHHHHHH
Confidence 2 23333333455666799999999999998 7777554444433
No 371
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=73.23 E-value=30 Score=32.64 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=97.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHH-HHHHHHHhCCC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAI-HATEQGFAVGM 154 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai-~la~~a~~~Ga 154 (359)
|.+.+.+.+....+.|.+.+=+-... +.++=.+.++.+++.++.++++.+-+ ++.+.++++ ++++..++.|+
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i 214 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGT------NVKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNI 214 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCC
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCC------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 67788888888899999998764332 46767788888888888889998865 355789999 99999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC--chh---hHh
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RVE 225 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss--~d~---~l~ 225 (359)
+.+ --|+ ...+ .+.++++.+. .||+.=. .-.+++.+.++.+ .-+++-+|-+- +-. ++.
T Consensus 215 ~~i--EqP~-~~~d----~~~~~~l~~~~~iPI~~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 281 (369)
T 2p8b_A 215 DWI--EQPV-IADD----IDAMAHIRSKTDLPLMIDE------GLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLA 281 (369)
T ss_dssp SCE--ECCB-CTTC----HHHHHHHHHTCCSCEEEST------TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHH
T ss_pred cEE--ECCC-Cccc----HHHHHHHHHhCCCCEEeCC------CCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHH
Confidence 743 4453 1112 4556667665 5766532 2356888888874 57899999753 222 333
Q ss_pred hhh-CCceEEEecC
Q 018253 226 HYT-GNGIVVWSGN 238 (359)
Q Consensus 226 ~~~-~~~~~v~~G~ 238 (359)
++. ..++.++.|.
T Consensus 282 ~~A~~~g~~~~~~~ 295 (369)
T 2p8b_A 282 HQAEMAGIECQVGS 295 (369)
T ss_dssp HHHHHTTCEEEECC
T ss_pred HHHHHcCCcEEecC
Confidence 322 2456666554
No 372
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=73.02 E-value=69 Score=31.16 Aligned_cols=150 Identities=9% Similarity=-0.022 Sum_probs=98.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCc------cCcCCC-CHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTT------GEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATE 147 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~Gst------GE~~~L-T~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~ 147 (359)
-+.+.+.+.++.+++.|.+.+=+-... |..... ..++=.+.++.+++.++.++++++-+ ++.+.++++++++
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~ 224 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQ 224 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHH
Confidence 478899999999999999998774321 211111 23455678888888898899999865 4668999999999
Q ss_pred HHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC--ch
Q 018253 148 QGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GN 221 (359)
Q Consensus 148 ~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss--~d 221 (359)
..++.|.+.+= -|.- ..+ .+.+++|.+. .||..=. .-.+++.+.++.+ .-.++-+|-+- |=
T Consensus 225 ~Le~~~i~~iE--eP~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~l~~g~~D~v~~d~~~~GGi 291 (433)
T 3rcy_A 225 AIEPYSPLWYE--EPVP-PDN----VGAMAQVARAVRIPVATGE------RLTTKAEFAPVLREGAAAILQPALGRAGGI 291 (433)
T ss_dssp HHGGGCCSEEE--CCSC-TTC----HHHHHHHHHHSSSCEEECT------TCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred HhhhcCCCEEE--CCCC-hhh----HHHHHHHHhccCCCEEecC------CCCCHHHHHHHHHcCCCCEEEeCchhcCCH
Confidence 99999987553 3432 112 4556677765 5776532 2356888888874 45788888643 22
Q ss_pred h---hHhhhh-CCceEEEecC
Q 018253 222 D---RVEHYT-GNGIVVWSGN 238 (359)
Q Consensus 222 ~---~l~~~~-~~~~~v~~G~ 238 (359)
. ++.+++ .-++.+..+.
T Consensus 292 t~~~kia~lA~~~gv~~~~h~ 312 (433)
T 3rcy_A 292 WEMKKVAAMAEVYNAQMAPHL 312 (433)
T ss_dssp HHHHHHHHHHHTTTCEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecC
Confidence 2 343332 3456665554
No 373
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=73.00 E-value=13 Score=35.58 Aligned_cols=78 Identities=10% Similarity=-0.007 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCc----------------------CC---------------------CCHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEG----------------------QL---------------------MSWDEH 113 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~----------------------~~---------------------LT~~Er 113 (359)
|.+...++++...+.|++.+.+.-.+--+ .. ++...-
T Consensus 134 d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~ 213 (370)
T 1gox_A 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLS 213 (370)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCC
T ss_pred CchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccch
Confidence 56777888999889999998776543111 00 001111
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 114 IMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 114 ~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
.+.++.+++.+ ++||++... .+ .+.++.+.++|+|++.+.+
T Consensus 214 ~~~i~~l~~~~--~~pv~vK~~-~~----~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 214 WKDVAWLQTIT--SLPILVKGV-IT----AEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp HHHHHHHHHHC--CSCEEEECC-CS----HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHh--CCCEEEEec-CC----HHHHHHHHHcCCCEEEECC
Confidence 23455556655 579998433 23 3567888999999999953
No 374
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=72.93 E-value=32 Score=31.35 Aligned_cols=134 Identities=9% Similarity=0.051 Sum_probs=73.9
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCC-----CCHHHHHHHHHHHHHhhCCCcEEEE-ecCC-------C----------
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQL-----MSWDEHIMLIGHTVNCFGASVKVIG-NTGS-------N---------- 137 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~-----LT~~Er~~li~~~v~~~~grvpVia-gvg~-------~---------- 137 (359)
+...++.+.+.|.+||=+.+. +.... ++.++..++.+.+ +.. .+.+.. ++.. .
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~~~~~~~~~~~l-~~~--gl~i~~~~~~~~g~~~~~p~~~~~~~~~~ 92 (340)
T 2zds_A 17 LEEVCRLARDFGYDGLELACW-GDHFEVDKALADPSYVDSRHQLL-DKY--GLKCWAISNHLVGQAVCDAIIDERHEAIL 92 (340)
T ss_dssp HHHHHHHHHHHTCSEEEEESS-TTTCCHHHHHHCTTHHHHHHHHH-HHT--TCEEEEEEEHHHHHHHHCSCCSHHHHHHS
T ss_pred HHHHHHHHHHcCCCEEEeccc-cccCCccccccCHHHHHHHHHHH-HHc--CCeEEEeeccccccccccccccccccccc
Confidence 456677777889999987765 22222 1333444444443 333 344432 2210 0
Q ss_pred --------C--------HHHHHHHHHHHHhCCCCEEEEcCCCCC-------C--C---CH---HHHHHHHHHHHhc----
Q 018253 138 --------S--------TREAIHATEQGFAVGMHAALHINPYYG-------K--T---SL---EGLISHFDSVLSM---- 182 (359)
Q Consensus 138 --------s--------t~~ai~la~~a~~~Gadav~v~pP~y~-------~--~---s~---~~l~~yf~~Ia~a---- 182 (359)
+ .+...+.++.|+++|+..+.+.+.... . + .+ +.+.+.++.+++.
T Consensus 93 ~~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~ 172 (340)
T 2zds_A 93 PARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAE 172 (340)
T ss_dssp CHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHc
Confidence 1 234556678889999998887643321 1 0 11 2355566666542
Q ss_pred -CCeEEEeCCCCCCCCCCHHHHHHHhc----CCCeEEEeccCch
Q 018253 183 -GPTIIYNVPSRTGQDIPPRVIHTMAQ----SPNLAGVKECVGN 221 (359)
Q Consensus 183 -~PiiiYn~P~~tg~~ls~e~l~~La~----~pnivGiK~ss~d 221 (359)
+.+.+-|.|... .-+++.+.+|.+ .|++ |+=...++
T Consensus 173 Gv~l~lEn~~~~~--~~~~~~~~~ll~~v~~~~~v-g~~~D~~H 213 (340)
T 2zds_A 173 GVRFAHEVHPSEI--AYDYWTTHRALEAVGHRPAF-GLNFDPSH 213 (340)
T ss_dssp TCEEEEECCTTSS--CCSHHHHHHHHHHTTTCTTE-EEEECCHH
T ss_pred CCEEEEEcCCCcc--cCCHHHHHHHHHhcCCCCCe-eEEEchhh
Confidence 577888877432 236777777763 4674 55443333
No 375
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=72.90 E-value=27 Score=30.68 Aligned_cols=59 Identities=10% Similarity=0.058 Sum_probs=42.3
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018253 128 VKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 191 (359)
Q Consensus 128 vpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P 191 (359)
..++......+.++..+..+...+.++|++++.+. +.+.....++.+.+. .|++++|.+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~-----~~~~~~~~~~~~~~~~iPvV~~~~~ 95 (291)
T 3l49_A 36 GTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLG-----NLDVLNPWLQKINDAGIPLFTVDTA 95 (291)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESS-----CHHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCC-----ChhhhHHHHHHHHHCCCcEEEecCC
Confidence 45555555567777888888888889999988744 234455667777665 799999865
No 376
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=72.58 E-value=9.8 Score=34.81 Aligned_cols=34 Identities=18% Similarity=0.107 Sum_probs=28.6
Q ss_pred cEEEEecCCC-CHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 128 VKVIGNTGSN-STREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 128 vpViagvg~~-st~~ai~la~~a~~~Gadav~v~p 161 (359)
.-||+|..+. +.+.+.++++.++++|+|++....
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~ 58 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGA 58 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBS
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 4578887544 789999999999999999998874
No 377
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=72.40 E-value=66 Score=30.36 Aligned_cols=131 Identities=9% Similarity=0.033 Sum_probs=92.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCC-CHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhC
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAV 152 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~L-T~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~ 152 (359)
..+.+.+.+.++..++.|.+++=+-...|.+.++ ..++=.++++.+++.++.++++.+-+ ++.+.++++++++..++.
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~ 226 (382)
T 1rvk_A 147 LATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKL 226 (382)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 3578889999999999999998765443322112 45666778888888888889998865 456899999999999999
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCC-HHHHHHHhc--CCCeEEEecc
Q 018253 153 GMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIP-PRVIHTMAQ--SPNLAGVKEC 218 (359)
Q Consensus 153 Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls-~e~l~~La~--~pnivGiK~s 218 (359)
|++.+ --|.- ..+ .+.+++|.+. .||+.=. .-.+ ++.+.++.+ .-+++-+|-+
T Consensus 227 ~i~~i--E~P~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~~i~~~~~d~v~ik~~ 284 (382)
T 1rvk_A 227 GFDWI--EEPMD-EQS----LSSYKWLSDNLDIPVVGPE------SAAGKHWHRAEWIKAGACDILRTGVN 284 (382)
T ss_dssp TCSEE--ECCSC-TTC----HHHHHHHHHHCSSCEEECS------SCSSHHHHHHHHHHTTCCSEEEECHH
T ss_pred CCCEE--eCCCC-hhh----HHHHHHHHhhCCCCEEEeC------CccCcHHHHHHHHHcCCCCEEeeCch
Confidence 98854 44532 112 4455666664 5776532 3456 788888863 5689999975
No 378
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=72.39 E-value=63 Score=30.09 Aligned_cols=144 Identities=12% Similarity=0.107 Sum_probs=97.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Gad 155 (359)
|.+.+.+.++...+.|.+.+=+-... +.++=.++++.+.+. +.++++.+-. ++.+.++++++++..++.|.+
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~------~~~~d~~~v~avr~~-g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 211 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGE------NLKEDIEAVEEIAKV-TRGAKYIVDANMGYTQKEAVEFARAVYQKGID 211 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS------CHHHHHHHHHHHHHH-STTCEEEEECTTCSCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecC------CHHHHHHHHHHHHhh-CCCCeEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 67788888888899999988764321 466667778888887 7789998855 456899999999999999988
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCeEEEeccCch-h---hHhhh
Q 018253 156 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECVGN-D---RVEHY 227 (359)
Q Consensus 156 av~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La--~~pnivGiK~ss~d-~---~l~~~ 227 (359)
...+--|.- ..+ .+.++++.+. .||+.=. .-.+++.+.++. ..-+++-+|-+-|- . ++.++
T Consensus 212 ~~~iE~P~~-~~~----~~~~~~l~~~~~ipia~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~GGit~~~~i~~~ 280 (345)
T 2zad_A 212 IAVYEQPVR-RED----IEGLKFVRFHSPFPVAADE------SARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEI 280 (345)
T ss_dssp CSEEECCSC-TTC----HHHHHHHHHHSSSCEEEST------TCCSHHHHHHHHHHTCCSEEEECHHHHHHHHHHHHHHH
T ss_pred eeeeeCCCC-ccc----HHHHHHHHHhCCCCEEEeC------CcCCHHHHHHHHHhCCCCEEEEecccccHHHHHHHHHH
Confidence 223455542 112 4455666654 5776543 234688888886 35789999876532 1 33333
Q ss_pred h-CCceEEEecC
Q 018253 228 T-GNGIVVWSGN 238 (359)
Q Consensus 228 ~-~~~~~v~~G~ 238 (359)
. ..++.++.|.
T Consensus 281 A~~~g~~~~~~~ 292 (345)
T 2zad_A 281 AESSGLKLMIGC 292 (345)
T ss_dssp HHTTTCEEEECC
T ss_pred HHHcCCeEEEec
Confidence 2 3456666664
No 379
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=72.15 E-value=3.6 Score=38.82 Aligned_cols=119 Identities=18% Similarity=0.207 Sum_probs=65.4
Q ss_pred CCceEEeeecCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc-CccCcC-CCC-HHHHHHHHHHHHHhhCC--CcEEEE
Q 018253 59 ALRLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQ-LMS-WDEHIMLIGHTVNCFGA--SVKVIG 132 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~-ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~-~LT-~~Er~~li~~~v~~~~g--rvpVia 132 (359)
+.||+-..+=-|.+.|+ .|.+...++++.+++.|++=|=++| ||.-+. ..+ .+|..+++.. ++.+.. ++||-+
T Consensus 12 iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pv-I~~l~~~~~vpiSI 90 (314)
T 2vef_A 12 ICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPV-IKAIRKESDVLISI 90 (314)
T ss_dssp EEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHH-HHHHHHHCCCEEEE
T ss_pred EEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHH-HHHHHhhCCceEEE
Confidence 57887766666887776 5899999999999999999999999 553332 223 3556655544 333322 566655
Q ss_pred ecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 133 NTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 133 gvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
-+.. . +-++.|.++||+-+-=+.-. ..+ + +.+..+++. .|+++-+.
T Consensus 91 DT~~--~----~Va~aAl~aGa~iINDVsg~--~~d-~---~m~~v~a~~~~~vvlmh~ 137 (314)
T 2vef_A 91 DTWK--S----QVAEAALAAGADLVNDITGL--MGD-E---KMPHVVAEARAQVVIMFN 137 (314)
T ss_dssp ECSC--H----HHHHHHHHTTCCEEEETTTT--CSC-T---THHHHHHHHTCEEEEECC
T ss_pred eCCC--H----HHHHHHHHcCCCEEEECCCC--CCC-h---HHHHHHHHcCCCEEEEec
Confidence 4443 3 33455566799766554321 111 1 233334554 68887765
No 380
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=72.11 E-value=14 Score=32.17 Aligned_cols=129 Identities=9% Similarity=0.039 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-e----------cCCCCHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N----------TGSNSTREAIHA 145 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-g----------vg~~st~~ai~l 145 (359)
|.+...++++.+++.+++|+++.+...+. . + .++.+.+ .++||+. + |+....+.....
T Consensus 43 ~~~~~~~~~~~l~~~~vdgiIi~~~~~~~----~-~---~~~~~~~---~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a 111 (272)
T 3o74_A 43 QPDSERQLQQLFRARRCDALFVASCLPPE----D-D---SYRELQD---KGLPVIAIDRRLDPAHFCSVISDDRDASRQL 111 (272)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCCCSS----C-C---HHHHHHH---TTCCEEEESSCCCTTTCEEEEECHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCcccc----H-H---HHHHHHH---cCCCEEEEccCCCccccCEEEEchHHHHHHH
Confidence 67788899999999999999998765331 1 1 2222222 2567653 2 223345566777
Q ss_pred HHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCe-EEEeCCCCCCCCCCHHHHHHHh-cCC-CeEEEecc
Q 018253 146 TEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPT-IIYNVPSRTGQDIPPRVIHTMA-QSP-NLAGVKEC 218 (359)
Q Consensus 146 a~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~Pi-iiYn~P~~tg~~ls~e~l~~La-~~p-nivGiK~s 218 (359)
+++..+.|...+.++.......+..+-.+-|++..+. .++ .++... . ...-..+.+.++. +.| .+.+|=-.
T Consensus 112 ~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~~~~~~~ai~~~ 187 (272)
T 3o74_A 112 AASLLSSAPRSIALIGARPELSVSQARAGGFDEALQGYTGEVRRYQGEA-F-SRECGQRLMQQLIDDLGGLPDALVTT 187 (272)
T ss_dssp HHHHHTTCCSEEEEEEECTTSHHHHHHHHHHHHHTTTCCSEEEEEEESS-S-SHHHHHHHHHHHHHHHTSCCSEEEES
T ss_pred HHHHHHCCCcEEEEEecCCCCccHHHHHHHHHHHHHHcCCChheeecCC-C-CHHHHHHHHHHHHhcCCCCCcEEEEe
Confidence 8888999988887765433222334444555555443 332 233211 1 0111123455555 566 56666433
No 381
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=72.07 E-value=16 Score=34.83 Aligned_cols=84 Identities=8% Similarity=-0.030 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHH---HCCCCEEEEccCc----cCcCCC-CHHHHHHHHHHHHHhhCCCcEEEEecCC-CCHHHHHHHHH
Q 018253 77 DLEAYDDLVNMQI---VNGAEGMIVGGTT----GEGQLM-SWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATE 147 (359)
Q Consensus 77 D~~~l~~li~~li---~~Gv~Gl~v~Gst----GE~~~L-T~~Er~~li~~~v~~~~grvpViagvg~-~st~~ai~la~ 147 (359)
|.+.+.+.++.+. +.|++.|-+|-+. |....+ ..+.-.++++.+.+.+ ++||++=+.- .+..+..+.++
T Consensus 137 ~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~--~~PV~vKi~p~~d~~~~~~~a~ 214 (354)
T 4ef8_A 137 SMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY--PHSFGVKMPPYFDFAHFDAAAE 214 (354)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC--CSCEEEEECCCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh--CCCeEEEecCCCCHHHHHHHHH
Confidence 5677777777776 5789999988652 322222 4577788888888765 5799886543 35666777788
Q ss_pred HHHhCC-CCEEEEcCC
Q 018253 148 QGFAVG-MHAALHINP 162 (359)
Q Consensus 148 ~a~~~G-adav~v~pP 162 (359)
.+.+.| +|++.+++-
T Consensus 215 ~~~~~Gg~d~I~~~NT 230 (354)
T 4ef8_A 215 ILNEFPKVQFITCINS 230 (354)
T ss_dssp HHHTCTTEEEEEECCC
T ss_pred HHHhCCCccEEEEecc
Confidence 788898 999988753
No 382
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=71.98 E-value=3 Score=37.88 Aligned_cols=69 Identities=14% Similarity=0.241 Sum_probs=45.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC-CHHHHHHHHHH
Q 018253 70 YLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN-STREAIHATEQ 148 (359)
Q Consensus 70 F~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~-st~~ai~la~~ 148 (359)
.++|-+...+. ++.+.++|+|.+.++||.|- |.+.=.++++.+.+ -.+|++.=.+.+ ..
T Consensus 15 gDP~~~~t~~~----~~~l~~~GaD~ielG~S~Gv----t~~~~~~~v~~ir~---~~~Pivlm~y~~n~i--------- 74 (240)
T 1viz_A 15 LDPNKDLPDEQ----LEILCESGTDAVIIGGSDGV----TEDNVLRMMSKVRR---FLVPCVLEVSAIEAI--------- 74 (240)
T ss_dssp ECTTSCCCHHH----HHHHHTSCCSEEEECC--------CHHHHHHHHHHHTT---SSSCEEEECSCGGGC---------
T ss_pred eCCCccccHHH----HHHHHHcCCCEEEECCCCCC----CHHHHHHHHHHhhC---cCCCEEEecCccccc---------
Confidence 34444444444 57778899999999997553 77666777776655 378999866652 22
Q ss_pred HHhCCCCEEEEc
Q 018253 149 GFAVGMHAALHI 160 (359)
Q Consensus 149 a~~~Gadav~v~ 160 (359)
+.|+|++++.
T Consensus 75 --~~G~dg~iiP 84 (240)
T 1viz_A 75 --VPGFDLYFIP 84 (240)
T ss_dssp --CSCCSEEEEE
T ss_pred --cCCCCEEEEc
Confidence 6799988774
No 383
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=71.96 E-value=21 Score=35.25 Aligned_cols=72 Identities=17% Similarity=0.256 Sum_probs=41.7
Q ss_pred HHHHHHCCCCEEEEccCccC--------cCCCCHHHHHHHHHHHHHhhCC-CcEEEEecCCCCHHHHHHHHHHHHhCCCC
Q 018253 85 VNMQIVNGAEGMIVGGTTGE--------GQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 85 i~~li~~Gv~Gl~v~GstGE--------~~~LT~~Er~~li~~~v~~~~g-rvpViagvg~~st~~ai~la~~a~~~Gad 155 (359)
++.+.+.|+++|.+.+..|- .+.... ...+..+.+...+ ++|||+.=|=.+..++.+ |.++|||
T Consensus 292 a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~---~~~l~~v~~~~~~~~ipvia~GGI~~~~di~k----ala~GAd 364 (494)
T 1vrd_A 292 TEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQ---LTAVMECSEVARKYDVPIIADGGIRYSGDIVK----ALAAGAE 364 (494)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCH---HHHHHHHHHHHHTTTCCEEEESCCCSHHHHHH----HHHTTCS
T ss_pred HHHHHHcCCCEEEEcCCCCccccccccCCCCccH---HHHHHHHHHHHhhcCCCEEEECCcCCHHHHHH----HHHcCCC
Confidence 35677899999999544331 111222 2233334443332 799998333334555544 3458999
Q ss_pred EEEEcCCC
Q 018253 156 AALHINPY 163 (359)
Q Consensus 156 av~v~pP~ 163 (359)
+|++..|+
T Consensus 365 ~V~iGr~~ 372 (494)
T 1vrd_A 365 SVMVGSIF 372 (494)
T ss_dssp EEEESHHH
T ss_pred EEEECHHH
Confidence 99998654
No 384
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=71.90 E-value=17 Score=35.09 Aligned_cols=74 Identities=20% Similarity=0.251 Sum_probs=42.7
Q ss_pred HHHHHHHHCCCCEEEEccCccC--------cCCCCHHHHHHHHHHHHHhhC-CCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGE--------GQLMSWDEHIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE--------~~~LT~~Er~~li~~~v~~~~-grvpViagvg~~st~~ai~la~~a~~~G 153 (359)
..++.+.+.|+++|.+.+..|- .+.... ...+..+.+... .++|||+.=|=.+.+++.+.. ++|
T Consensus 206 ~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~---~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~al----a~G 278 (404)
T 1eep_A 206 EAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQ---ITAICDVYEACNNTNICIIADGGIRFSGDVVKAI----AAG 278 (404)
T ss_dssp HHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCH---HHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHH----HHT
T ss_pred HHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcch---HHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHH----HcC
Confidence 4556777899999999321110 011111 233444455443 479999833323455555443 479
Q ss_pred CCEEEEcCCC
Q 018253 154 MHAALHINPY 163 (359)
Q Consensus 154 adav~v~pP~ 163 (359)
||+|++..++
T Consensus 279 Ad~V~iG~~~ 288 (404)
T 1eep_A 279 ADSVMIGNLF 288 (404)
T ss_dssp CSEEEECHHH
T ss_pred CCHHhhCHHH
Confidence 9999998655
No 385
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=71.84 E-value=17 Score=34.11 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=70.5
Q ss_pred HHHHHHHCCCCEEEE-----ccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe--c---------CCCCHHHHHHHHH
Q 018253 84 LVNMQIVNGAEGMIV-----GGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN--T---------GSNSTREAIHATE 147 (359)
Q Consensus 84 li~~li~~Gv~Gl~v-----~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag--v---------g~~st~~ai~la~ 147 (359)
-++..++.|++++-+ .|+-.| .+.-.++-+.+-++..-.+|+++= + ...+.+-....++
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e-----~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaR 207 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGT-----APTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVA 207 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTH-----HHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHH
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhH-----HHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHH
Confidence 455666779999552 344444 333444444444445557898773 1 2357888899999
Q ss_pred HHHhCCCC----EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCC-C-HHHHHHHhc---CCCeEEEe
Q 018253 148 QGFAVGMH----AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDI-P-PRVIHTMAQ---SPNLAGVK 216 (359)
Q Consensus 148 ~a~~~Gad----av~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~l-s-~e~l~~La~---~pnivGiK 216 (359)
.|.++||| -+=+-.| +-|++|.++ .|+++== |-.. + .++++.+.+ .+...|+=
T Consensus 208 iAaELGADs~~tivK~~y~-----------e~f~~Vv~a~~vPVViaG-----G~k~~~~~e~L~~v~~A~~~aGa~Gv~ 271 (307)
T 3fok_A 208 IAAGLGNDSSYTWMKLPVV-----------EEMERVMESTTMPTLLLG-----GEGGNDPDATFASWEHALTLPGVRGLT 271 (307)
T ss_dssp HHHTCSSCCSSEEEEEECC-----------TTHHHHGGGCSSCEEEEC-----CSCC--CHHHHHHHHHHTTSTTEEEEE
T ss_pred HHHHhCCCcCCCEEEeCCc-----------HHHHHHHHhCCCCEEEeC-----CCCCCCHHHHHHHHHHHHHhCCCeEEe
Confidence 99999999 6655222 236888776 6888863 3233 2 466666652 36888886
Q ss_pred c
Q 018253 217 E 217 (359)
Q Consensus 217 ~ 217 (359)
.
T Consensus 272 v 272 (307)
T 3fok_A 272 V 272 (307)
T ss_dssp E
T ss_pred e
Confidence 5
No 386
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=71.83 E-value=11 Score=35.09 Aligned_cols=113 Identities=12% Similarity=0.133 Sum_probs=79.2
Q ss_pred EeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccC-cc----Cc--CCCCHHHHHHHHHHHHHhhCCCcEEEEec--
Q 018253 64 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGT-TG----EG--QLMSWDEHIMLIGHTVNCFGASVKVIGNT-- 134 (359)
Q Consensus 64 ~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~Gs-tG----E~--~~LT~~Er~~li~~~v~~~~grvpViagv-- 134 (359)
..++|.+| ....++++ +.|++.+++.|. .+ -- -.+|.+|....++.+.+.+ ++||++-.
T Consensus 17 i~~~~a~D-------~~sA~~~~---~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~d~ 84 (290)
T 2hjp_A 17 FTAMAAHN-------PLVAKLAE---QAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTV--SIPLIADIDT 84 (290)
T ss_dssp EEEEECSS-------HHHHHHHH---HHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTC--SSCEEEECTT
T ss_pred EEEecCCC-------HHHHHHHH---HcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEEECCC
Confidence 34677776 34445554 479999999972 33 22 3689999999998888765 47998843
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCCC----------C--CCCHHHHHHHHHHHHhc---CCeEEE
Q 018253 135 GSNSTREAIHATEQGFAVGMHAALHINPYY----------G--KTSLEGLISHFDSVLSM---GPTIIY 188 (359)
Q Consensus 135 g~~st~~ai~la~~a~~~Gadav~v~pP~y----------~--~~s~~~l~~yf~~Ia~a---~PiiiY 188 (359)
|-.+..++.+.++...++||++|-+---.. . -.++++..+-.+++.++ .+++|.
T Consensus 85 Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~ 153 (290)
T 2hjp_A 85 GFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVI 153 (290)
T ss_dssp TTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEE
Confidence 323889999999999999999998854321 1 13667777788877765 355554
No 387
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=71.80 E-value=16 Score=32.16 Aligned_cols=123 Identities=8% Similarity=0.013 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHH-HHHHhhCCCcEEEE---------ecCCCCHHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIG-HTVNCFGASVKVIG---------NTGSNSTREAIHAT 146 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~-~~v~~~~grvpVia---------gvg~~st~~ai~la 146 (359)
|.+...++++.+++.+++|+++.+. +. +. ++ .+.+ .++||+. .|+....+.....+
T Consensus 49 ~~~~~~~~~~~l~~~~~dgiIi~~~-------~~-~~---~~~~l~~---~~iPvV~~~~~~~~~~~V~~D~~~~g~~a~ 114 (277)
T 3e61_A 49 DIKKAQGYLATFVSHNCTGMISTAF-------NE-NI---IENTLTD---HHIPFVFIDRINNEHNGISTNHFKGGQLQA 114 (277)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECGG-------GH-HH---HHHHHHH---C-CCEEEGGGCC---------HHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecC-------Ch-HH---HHHHHHc---CCCCEEEEeccCCCCCeEEechHHHHHHHH
Confidence 6778889999999999999999872 22 21 33 2222 2577765 24444556677788
Q ss_pred HHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHH-hc-CCeE-EEeCCCCCCCCCCHHHHHHHhcCCCeEEEecc
Q 018253 147 EQGFAVGMHAALHINPYYGKTSLEGLISHFDSVL-SM-GPTI-IYNVPSRTGQDIPPRVIHTMAQSPNLAGVKEC 218 (359)
Q Consensus 147 ~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia-~a-~Pii-iYn~P~~tg~~ls~e~l~~La~~pnivGiK~s 218 (359)
++..+.|...+.++.......+..+-.+-|++.. +. .++. ++.. ..+. .+....|.+.|.+.+|=-.
T Consensus 115 ~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~----~~~~-~~~~~~l~~~~~~~ai~~~ 184 (277)
T 3e61_A 115 EVVRKGKGKNVLIVHENLLIDAFHQRVQGIKYILDQQRIDYKMLEAT----LLDN-DKKFIDLIKELSIDSIICS 184 (277)
T ss_dssp HHHHHTTCCSEEEEESCTTSHHHHHHHHHHHHHHHC---CEEEEEGG----GGGS-HHHHHHHHHHHTCCEEEES
T ss_pred HHHHHCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHcCCCccceecC----CCCH-HHHHHHhhcCCCCCEEEEC
Confidence 8888899877766643322223334344444444 43 4443 2221 1111 2233335555666666544
No 388
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=71.80 E-value=72 Score=30.53 Aligned_cols=131 Identities=11% Similarity=0.063 Sum_probs=90.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccC--ccC------cCCC---CHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHH
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGT--TGE------GQLM---SWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREA 142 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~Gs--tGE------~~~L---T~~Er~~li~~~v~~~~grvpViagv-g~~st~~a 142 (359)
.++.+.+.+.+....+.|.+++=+-.. .|- +..- ..++=.+.++.+++.++.++++.+-+ ++.+.+++
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~~~a 226 (410)
T 2qq6_A 147 EGSNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDIPSS 226 (410)
T ss_dssp STHHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHH
Confidence 357788989999999999999765431 121 1111 23445677888888888889998865 45689999
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEecc
Q 018253 143 IHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKEC 218 (359)
Q Consensus 143 i~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~s 218 (359)
+++++..++.|.+.+ --|.- + +-.+.+++|.+. .||+.=. .-.+++.++++.+ .-+++-+|-+
T Consensus 227 ~~~~~~l~~~~i~~i--EeP~~--~---~d~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~ 293 (410)
T 2qq6_A 227 IRFARAMEPFGLLWL--EEPTP--P---ENLDALAEVRRSTSTPICAGE------NVYTRFDFRELFAKRAVDYVMPDVA 293 (410)
T ss_dssp HHHHHHHGGGCCSEE--ECCSC--T---TCHHHHHHHHTTCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCBHH
T ss_pred HHHHHHHhhcCCCeE--ECCCC--h---hhHHHHHHHHhhCCCCEEeCC------CcCCHHHHHHHHHcCCCCEEecCcc
Confidence 999999999998753 34432 1 115566777775 5776533 2346888888873 5688889964
No 389
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=71.76 E-value=50 Score=29.28 Aligned_cols=129 Identities=12% Similarity=0.136 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEE-EecC------CCC-------HHHHHHH
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNTG------SNS-------TREAIHA 145 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVi-agvg------~~s-------t~~ai~l 145 (359)
.+...++.+.+.|.+||=+....- .++..+ ++...+.. .+.+. ++.+ +.+ .+...+.
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~~------~~~~~~-~~~~l~~~--gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 109 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGGL------AGRVNE-IKQALNGR--NIKVSAICAGFKGFILSTDPAIRKECMDTMKEI 109 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTC------GGGHHH-HHHHHTTS--SCEECEEECCCCSCTTBSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCCch------HHHHHH-HHHHHHHc--CCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 566788888899999998776621 122222 22333322 35543 2332 122 2445567
Q ss_pred HHHHHhCCCCEEEEcCCCCC-C----CCH---HHHHHHHHHHHhc-----CCeEEEeCCCCCCC-CCCHHHHHHHh-c--
Q 018253 146 TEQGFAVGMHAALHINPYYG-K----TSL---EGLISHFDSVLSM-----GPTIIYNVPSRTGQ-DIPPRVIHTMA-Q-- 208 (359)
Q Consensus 146 a~~a~~~Gadav~v~pP~y~-~----~s~---~~l~~yf~~Ia~a-----~PiiiYn~P~~tg~-~ls~e~l~~La-~-- 208 (359)
++.|+++|++.+.+.+.+.. . ..+ +.+.+.++.+++. +.+.+-|.+...+. --+++.+.+|. +
T Consensus 110 i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v~ 189 (287)
T 3kws_A 110 IAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDIN 189 (287)
T ss_dssp HHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcC
Confidence 78889999998888654321 1 232 3455666666542 47778776532232 23577777776 3
Q ss_pred CCCeEEEec
Q 018253 209 SPNLAGVKE 217 (359)
Q Consensus 209 ~pnivGiK~ 217 (359)
.|++.-.=|
T Consensus 190 ~~~vg~~~D 198 (287)
T 3kws_A 190 NPGVRCMGD 198 (287)
T ss_dssp CTTEEEEEE
T ss_pred CCCeeEEee
Confidence 577544434
No 390
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=71.74 E-value=46 Score=28.27 Aligned_cols=165 Identities=10% Similarity=0.005 Sum_probs=89.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gad 155 (359)
.|.+...+.++.+.+ |++.+=+ |. +-+ ..+=.++++...+... +.|++++..-.++-++ .++.+.++|||
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev-~~-~~~----~~~g~~~i~~l~~~~~-~~~i~~~l~~~di~~~--~~~~a~~~Gad 79 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIEL-GT-PLI----KAEGLSVITAVKKAHP-DKIVFADMKTMDAGEL--EADIAFKAGAD 79 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEE-CH-HHH----HHHCTHHHHHHHHHST-TSEEEEEEEECSCHHH--HHHHHHHTTCS
T ss_pred CCHHHHHHHHHHhhc-cCCEEEE-Cc-HHH----HhhCHHHHHHHHHhCC-CCeEEEEEEecCccHH--HHHHHHhCCCC
Confidence 477888888888877 8888766 21 111 2233456777666543 5789986654452222 45788899999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCC-CHHH-HHHHhcC-CCeEEEeccC-----ch----h
Q 018253 156 AALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDI-PPRV-IHTMAQS-PNLAGVKECV-----GN----D 222 (359)
Q Consensus 156 av~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~l-s~e~-l~~La~~-pnivGiK~ss-----~d----~ 222 (359)
++.+.+ .. ..+.+.+..+.+.+. .++.+-- ... +|+. +.++.+. ...+++.-+. +. .
T Consensus 80 ~v~vh~-~~---~~~~~~~~~~~~~~~g~~~gv~~------~s~~~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~ 149 (207)
T 3ajx_A 80 LVTVLG-SA---DDSTIAGAVKAAQAHNKGVVVDL------IGIEDKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLNG 149 (207)
T ss_dssp EEEEET-TS---CHHHHHHHHHHHHHHTCEEEEEC------TTCSSHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTHH
T ss_pred EEEEec-cC---ChHHHHHHHHHHHHcCCceEEEE------ecCCChHHHHHHHHHhCCCEEEEEecccccccCCCchHH
Confidence 998652 11 234444444443333 3432210 012 4444 4555432 3444333211 11 2
Q ss_pred hHhhhh--CCceEEEecCCchhhhhhhhcCCceeeccccc
Q 018253 223 RVEHYT--GNGIVVWSGNDDQCHDARWNHGATGVISVTSN 260 (359)
Q Consensus 223 ~l~~~~--~~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an 260 (359)
++++.. +..+.+-.|-...-....+..|++|++.|.+-
T Consensus 150 ~i~~~~~~~~pi~v~GGI~~~~~~~~~~aGad~vvvGsaI 189 (207)
T 3ajx_A 150 LLAAGEKARVPFSVAGGVKVATIPAVQKAGAEVAVAGGAI 189 (207)
T ss_dssp HHHHHHHHTSCEEEESSCCGGGHHHHHHTTCSEEEESHHH
T ss_pred HHHHhhCCCCCEEEECCcCHHHHHHHHHcCCCEEEEeeec
Confidence 344433 33455555664334445578999999987553
No 391
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=71.73 E-value=13 Score=32.82 Aligned_cols=83 Identities=14% Similarity=0.153 Sum_probs=46.6
Q ss_pred HHHHC--CCCEEEEc----cCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE--ecCCCCHHHHHHHHHHHHhCCCCEEE
Q 018253 87 MQIVN--GAEGMIVG----GTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAVGMHAAL 158 (359)
Q Consensus 87 ~li~~--Gv~Gl~v~----GstGE~~~LT~~Er~~li~~~v~~~~grvpVia--gvg~~st~~ai~la~~a~~~Gadav~ 158 (359)
.+.+. +++-+++. |++|+ .+.+ +-.+.++.+.+.. +++|+++ |++..+..+.+ ++|||.+.
T Consensus 131 ~~~~~~~~~d~vl~~sv~pg~~g~--~~~~-~~l~~i~~~~~~~-~~~pi~v~GGI~~~ni~~~~-------~aGaD~vv 199 (228)
T 1h1y_A 131 PLVEAENPVELVLVMTVEPGFGGQ--KFMP-EMMEKVRALRKKY-PSLDIEVDGGLGPSTIDVAA-------SAGANCIV 199 (228)
T ss_dssp HHHHSSSCCSEEEEESSCTTCSSC--CCCG-GGHHHHHHHHHHC-TTSEEEEESSCSTTTHHHHH-------HHTCCEEE
T ss_pred HHHhcCCCCCEEEEEeecCCCCcc--cCCH-HHHHHHHHHHHhc-CCCCEEEECCcCHHHHHHHH-------HcCCCEEE
Confidence 34454 88988772 44443 3332 2222234444444 2678765 45544333332 23999999
Q ss_pred EcCCCCCCCCHHHHHHHHHHHH
Q 018253 159 HINPYYGKTSLEGLISHFDSVL 180 (359)
Q Consensus 159 v~pP~y~~~s~~~l~~yf~~Ia 180 (359)
+..-.+...+.++-.+-+++..
T Consensus 200 vGsai~~~~d~~~~~~~l~~~~ 221 (228)
T 1h1y_A 200 AGSSIFGAAEPGEVISALRKSV 221 (228)
T ss_dssp ESHHHHTSSCHHHHHHHHHHHH
T ss_pred ECHHHHCCCCHHHHHHHHHHHH
Confidence 9977666667766666665544
No 392
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=71.52 E-value=12 Score=34.83 Aligned_cols=82 Identities=7% Similarity=-0.010 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc----------cCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecC-CCCHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTT----------GEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG-SNSTREAIHA 145 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~Gst----------GE~~~LT~~Er~~li~~~v~~~~grvpViagvg-~~st~~ai~l 145 (359)
|.+.+.+.++.+.+. .++|-+++.. |-...-..+.-.++++.+.+.++ +||.+-+. +.+..+..++
T Consensus 69 ~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~--~pv~vKir~G~~~~~~~~~ 145 (318)
T 1vhn_A 69 EPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS--GKFSVKTRLGWEKNEVEEI 145 (318)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCS--SEEEEEEESCSSSCCHHHH
T ss_pred CHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhC--CCEEEEecCCCChHHHHHH
Confidence 568899999998888 9999998642 11111234555666777776664 78877542 1233455699
Q ss_pred HHHHHhCCCCEEEEcC
Q 018253 146 TEQGFAVGMHAALHIN 161 (359)
Q Consensus 146 a~~a~~~Gadav~v~p 161 (359)
++.+++.|+|++.+..
T Consensus 146 a~~l~~~G~d~i~v~g 161 (318)
T 1vhn_A 146 YRILVEEGVDEVFIHT 161 (318)
T ss_dssp HHHHHHTTCCEEEEES
T ss_pred HHHHHHhCCCEEEEcC
Confidence 9999999999998853
No 393
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=71.40 E-value=25 Score=33.59 Aligned_cols=106 Identities=14% Similarity=0.110 Sum_probs=64.5
Q ss_pred HHHHHHHCCCCEEEEccC-ccCcCCCCHHHHHHHHH-------HHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHh-CCC
Q 018253 84 LVNMQIVNGAEGMIVGGT-TGEGQLMSWDEHIMLIG-------HTVNCFGASVKVIGNTGSNSTREAIHATEQGFA-VGM 154 (359)
Q Consensus 84 li~~li~~Gv~Gl~v~Gs-tGE~~~LT~~Er~~li~-------~~v~~~~grvpViagvg~~st~~ai~la~~a~~-~Ga 154 (359)
.++.+-+.||+.-++..+ -|-......++...+.+ .+++..++|.--++.+.-...+++++..+++.+ .|+
T Consensus 95 rl~~MD~~GId~~Vl~~~~pg~~~~~d~~~a~~~~r~~Nd~l~~~~~~~P~Rf~g~a~v~~~~~~~a~~EL~r~~~~~G~ 174 (373)
T 4inf_A 95 RIADMDATGIDKAILALTSPGVQPLHDLDEARTLATRANDTLADACQKYPDRFIGMGTVAPQDPEWSAREIHRGARELGF 174 (373)
T ss_dssp HHHHHHHTTCCEEEEEECTTTTTTCSCHHHHHHHHHHHHHHHHHHHHHSTTTEEECBCCCTTSHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHCCCcEEEEccCCccccccCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecCCCCHHHHHHHHHHHHhhcCc
Confidence 666777899996555433 23211345544433322 223334566444444544456777777777765 599
Q ss_pred CEEEEcCCCC-CCCCHHHHHHHHHHHHhc-CCeEEEe
Q 018253 155 HAALHINPYY-GKTSLEGLISHFDSVLSM-GPTIIYN 189 (359)
Q Consensus 155 dav~v~pP~y-~~~s~~~l~~yf~~Ia~a-~PiiiYn 189 (359)
.++.+.+.+- ..++...+...|+.+.+. .||+++-
T Consensus 175 ~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV~iH~ 211 (373)
T 4inf_A 175 KGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHP 211 (373)
T ss_dssp CCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCEEECC
T ss_pred eEEEECCCCCCCCCCCcchHHHHHHHHHcCCeEEECC
Confidence 9998754322 134667788899988886 7988874
No 394
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=71.18 E-value=12 Score=36.98 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=42.5
Q ss_pred HHHHHCCCCEEEEccCccCcCCCCHHH-------HHHHHHHHHHhh-CCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEE
Q 018253 86 NMQIVNGAEGMIVGGTTGEGQLMSWDE-------HIMLIGHTVNCF-GASVKVIGNTGSNSTREAIHATEQGFAVGMHAA 157 (359)
Q Consensus 86 ~~li~~Gv~Gl~v~GstGE~~~LT~~E-------r~~li~~~v~~~-~grvpViagvg~~st~~ai~la~~a~~~Gadav 157 (359)
..+++.|++++.+. ..| +...+... ....+..+++.+ ..++|||+.=|-.+..+..+. .++|||++
T Consensus 289 ~~~~~~Gad~I~vg-~g~-g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~ka----l~~GA~~v 362 (491)
T 1zfj_A 289 RALYDAGVDVVKVG-IGP-GSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKA----LAAGGNAV 362 (491)
T ss_dssp HHHHHTTCSEEEEC-SSC-CTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHH----HHTTCSEE
T ss_pred HHHHHcCCCEEEEC-ccC-CcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHH----HHcCCcce
Confidence 35778999999884 211 01001000 112222222222 136999995554566666554 35899999
Q ss_pred EEcCCCCC
Q 018253 158 LHINPYYG 165 (359)
Q Consensus 158 ~v~pP~y~ 165 (359)
++-.|++.
T Consensus 363 ~vG~~~~~ 370 (491)
T 1zfj_A 363 MLGSMFAG 370 (491)
T ss_dssp EESTTTTT
T ss_pred eeCHHhhC
Confidence 99999885
No 395
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=71.08 E-value=14 Score=35.96 Aligned_cols=77 Identities=21% Similarity=0.280 Sum_probs=43.5
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHH-------HHHHHHHHHHHhhC-CCcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWD-------EHIMLIGHTVNCFG-ASVKVIGNTGSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~-------Er~~li~~~v~~~~-grvpViagvg~~st~~ai~la~~a~~~Ga 154 (359)
+.++.+++.|+|+|.+..+.| ..-+.. -...++..+.+.+. -++|||+.=|=.+.++.. .|.++||
T Consensus 196 e~A~~a~~aGAD~I~vG~g~G--s~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~----kalalGA 269 (400)
T 3ffs_A 196 EATKELIENGADGIKVGIGPG--SICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIG----KALAVGA 269 (400)
T ss_dssp HHHHHHHHTTCSEEEECC-----------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHH----HHHTTTC
T ss_pred HHHHHHHHcCCCEEEEeCCCC--cCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHH----HHHHcCC
Confidence 455678889999999932222 110100 12344555555443 369999832222344443 3456899
Q ss_pred CEEEEcCCCCC
Q 018253 155 HAALHINPYYG 165 (359)
Q Consensus 155 dav~v~pP~y~ 165 (359)
|+|++-..+..
T Consensus 270 d~V~vGt~f~~ 280 (400)
T 3ffs_A 270 SSVMIGSILAG 280 (400)
T ss_dssp SEEEECGGGTT
T ss_pred CEEEEChHHhc
Confidence 99999977654
No 396
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=70.87 E-value=14 Score=34.86 Aligned_cols=71 Identities=11% Similarity=-0.010 Sum_probs=46.5
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHH----HHHHHhhCC-CcEEEEecCCCCHHHHHHHHHHHHhCCCCE
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLI----GHTVNCFGA-SVKVIGNTGSNSTREAIHATEQGFAVGMHA 156 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li----~~~v~~~~g-rvpViagvg~~st~~ai~la~~a~~~Gada 156 (359)
.++++.++++|+++|.+.-+.|. .||.++..+.+ +.+++.+.. .+|++..+.++ .. +.....+.|+|+
T Consensus 196 ~~~~~~~~~aGad~i~i~D~~~~--~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~--~~---~l~~l~~~g~d~ 268 (359)
T 2inf_A 196 IVYVKAQIKAGAKAIQIFDSWVG--ALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGA--SH---LAGDWHDLPLDV 268 (359)
T ss_dssp HHHHHHHHHTTCSEEEEECTTGG--GSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTC--GG---GHHHHHTSSCSE
T ss_pred HHHHHHHHHhCCCEEEEeCCccc--cCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCc--HH---HHHHHHHhCCCE
Confidence 44556677899999998887664 79988776654 333444432 37887766544 22 444556799997
Q ss_pred EEE
Q 018253 157 ALH 159 (359)
Q Consensus 157 v~v 159 (359)
+-+
T Consensus 269 ~~~ 271 (359)
T 2inf_A 269 VGL 271 (359)
T ss_dssp EEC
T ss_pred EEe
Confidence 754
No 397
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=70.43 E-value=10 Score=41.99 Aligned_cols=99 Identities=15% Similarity=0.165 Sum_probs=79.1
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~G 153 (359)
+..|.+-+.++++.+.+.|++-|.+.-|.| .+++.+-.++++.+.+.+ .+|+=+++ +++..-++..+-.|.++|
T Consensus 704 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G---~~~P~~~~~lv~~l~~~~--~~~i~~H~-Hnd~GlAvAn~laAv~aG 777 (1165)
T 2qf7_A 704 PKYDLKYYTNLAVELEKAGAHIIAVKDMAG---LLKPAAAKVLFKALREAT--GLPIHFHT-HDTSGIAAATVLAAVEAG 777 (1165)
T ss_dssp GGGCHHHHHHHHHHHHHTTCSEEEEEETTC---CCCHHHHHHHHHHHHHHC--SSCEEEEE-CBTTSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCccC---CcCHHHHHHHHHHHHHhc--CCeEEEEE-CCCCCHHHHHHHHHHHhC
Confidence 348999999999999999999999999999 578999999999999887 57776665 567788899999999999
Q ss_pred CCEEEEcCC-CC---CCCCHHHHHHHHHH
Q 018253 154 MHAALHINP-YY---GKTSLEGLISHFDS 178 (359)
Q Consensus 154 adav~v~pP-~y---~~~s~~~l~~yf~~ 178 (359)
||.+=..-- +- ..++-++++..++.
T Consensus 778 a~~vd~ti~GlGe~~Gn~~le~vv~~L~~ 806 (1165)
T 2qf7_A 778 VDAVDAAMDALSGNTSQPCLGSIVEALSG 806 (1165)
T ss_dssp CSEEEEBCGGGCSBTSCCBHHHHHHHHTT
T ss_pred CCEEEecccccCCCccchhHHHHHHHHHh
Confidence 999966543 22 23455666665553
No 398
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=70.24 E-value=22 Score=34.07 Aligned_cols=108 Identities=13% Similarity=-0.044 Sum_probs=0.0
Q ss_pred eecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCH------
Q 018253 66 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST------ 139 (359)
Q Consensus 66 l~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st------ 139 (359)
...|+-.|-.+|+..... .++.|++.+=++...=- +.+.-.++++.+.+. .+|+-+||.+-|.
T Consensus 83 ~~vPlvaDiHf~~~lal~----a~e~G~dklRINPGNig----~~~~~~~vv~~ak~~---~~piRIGvN~GSL~~~ll~ 151 (366)
T 3noy_A 83 SPMPVIADIHFAPSYAFL----SMEKGVHGIRINPGNIG----KEEIVREIVEEAKRR---GVAVRIGVNSGSLEKDLLE 151 (366)
T ss_dssp CSSCEEEECCSCHHHHHH----HHHTTCSEEEECHHHHS----CHHHHHHHHHHHHHH---TCEEEEEEEGGGCCHHHHH
T ss_pred CCCCEEEeCCCCHHHHHH----HHHhCCCeEEECCcccC----chhHHHHHHHHHHHc---CCCEEEecCCcCCCHHHHH
Q ss_pred -----------HHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEE
Q 018253 140 -----------REAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTII 187 (359)
Q Consensus 140 -----------~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~Piii 187 (359)
+-+++.++.+++.|.+-+.+....- +....++-|+.+++. -|+-+
T Consensus 152 ~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S---~v~~~i~ayr~la~~~dyPLHl 209 (366)
T 3noy_A 152 KYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKGS---DVLQNVRANLIFAERTDVPLHI 209 (366)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECS---SHHHHHHHHHHHHHHCCCCEEE
T ss_pred hcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecC---ChHHHHHHHHHHHhccCCCEEE
No 399
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=70.19 E-value=19 Score=32.61 Aligned_cols=169 Identities=11% Similarity=0.017 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCc---CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHh
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG---QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFA 151 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~---~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~ 151 (359)
+.|+..+.+-++.+.+.|++-+-+==.-|-| .++.. .+++...+... ++|+-+..--.+.++ +.+.+.+
T Consensus 36 saD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~----~~v~~lr~~~p-~~~ldvHLmv~~p~~---~i~~~~~ 107 (246)
T 3inp_A 36 SADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGP----MVLKALRDYGI-TAGMDVHLMVKPVDA---LIESFAK 107 (246)
T ss_dssp GSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCH----HHHHHHHHHTC-CSCEEEEEECSSCHH---HHHHHHH
T ss_pred cCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCH----HHHHHHHHhCC-CCeEEEEEeeCCHHH---HHHHHHH
Q ss_pred CCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhc----------CCCeEEEeccCc
Q 018253 152 VGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQ----------SPNLAGVKECVG 220 (359)
Q Consensus 152 ~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~----------~pnivGiK~ss~ 220 (359)
+|||.+.+. ....+.+.+..+.+-+. .-+.+==+| .-+.+.++.+.+ .|.+-|-|.-..
T Consensus 108 aGAd~itvH-----~Ea~~~~~~~i~~ir~~G~k~Gvalnp-----~Tp~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 108 AGATSIVFH-----PEASEHIDRSLQLIKSFGIQAGLALNP-----ATGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp HTCSEEEEC-----GGGCSCHHHHHHHHHTTTSEEEEEECT-----TCCSGGGTTTGGGCSEEEEECSCTTC--CCCCTT
T ss_pred cCCCEEEEc-----cccchhHHHHHHHHHHcCCeEEEEecC-----CCCHHHHHHHHhcCCEEEEeeecCCCCCcccchH
Q ss_pred h-hhHhhhhC--------CceEEEecCCchhhhhhhhcCCceeecccccc
Q 018253 221 N-DRVEHYTG--------NGIVVWSGNDDQCHDARWNHGATGVISVTSNL 261 (359)
Q Consensus 221 d-~~l~~~~~--------~~~~v~~G~d~~~~~~~l~~Ga~G~is~~an~ 261 (359)
. .+++++.. -.+.|=.|-..........+|++.++.|.+-+
T Consensus 178 ~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~GSaIf 227 (246)
T 3inp_A 178 MLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIF 227 (246)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEehHHh
No 400
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=70.07 E-value=30 Score=31.37 Aligned_cols=123 Identities=9% Similarity=-0.027 Sum_probs=70.7
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
.+.+++.+-+.||+..++.+..-.. .+-..+++.+ +..++++--++|+--.... +..++..+.|+-||-+.
T Consensus 55 ~e~~l~~~~~~GV~~~V~v~~~~~~-----~~n~~~~~~~-~~~p~r~~g~~~v~P~~~~---~eL~~l~~~gv~Gi~l~ 125 (294)
T 4i6k_A 55 VQSFISHLDEHNFTHGVLVQPSFLG-----TNNQAMLNAI-QQYPDRLKGIAVVQHTTTF---NELVNLKAQGIVGVRLN 125 (294)
T ss_dssp HHHHHHHHHHTTCCEEEEECCGGGT-----TCCHHHHHHH-HHSTTTEEEEECCCTTCCH---HHHHHHHTTTEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEecCcccc-----cchHHHHHHH-HHCCCeEEEEEEeCCcccH---HHHHHHHHCCCcEEEec
Confidence 4566677778999998887654321 1223344443 3345676556666433222 33344455699888764
Q ss_pred CCCCC---CCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEEeccCc
Q 018253 161 NPYYG---KTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKECVG 220 (359)
Q Consensus 161 pP~y~---~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La-~~pnivGiK~ss~ 220 (359)
+ +.. ....+.+...++.+.+. +||+++--+. .++.+.+++ ++| +.+|=+..+
T Consensus 126 ~-~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~~------~l~~~~~~l~~~p-~~~Vi~H~g 182 (294)
T 4i6k_A 126 L-FGLNLPALNTPDWQKFLRNVESLNWQVELHAPPK------YLVQLLPQLNEYS-FDVVIDHFG 182 (294)
T ss_dssp C-TTSCCCCSSSHHHHHHHHHHHHTTCEEEEECCHH------HHHHHHHHHTTSS-SCEEESGGG
T ss_pred c-CCCCCCCcccHHHHHHHHHHHHcCCEEEEeeCcc------hHHHHHHHHHHCC-CCEEEECCC
Confidence 3 222 12446777778777775 7999986431 133455555 677 655554433
No 401
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=70.02 E-value=26 Score=30.89 Aligned_cols=59 Identities=10% Similarity=-0.066 Sum_probs=42.7
Q ss_pred cEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018253 128 VKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 191 (359)
Q Consensus 128 vpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P 191 (359)
..+++.....+.+...+..+...+.++|++++.+... +.+...++.+.+. .|++++|.+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~-----~~~~~~~~~~~~~~iPvV~~~~~ 98 (293)
T 3l6u_A 39 YEALVATSQNSRISEREQILEFVHLKVDAIFITTLDD-----VYIGSAIEEAKKAGIPVFAIDRM 98 (293)
T ss_dssp CEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCT-----TTTHHHHHHHHHTTCCEEEESSC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh-----HHHHHHHHHHHHcCCCEEEecCC
Confidence 4566555667888888999999999999999986532 2233455666665 799999864
No 402
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=69.94 E-value=12 Score=35.28 Aligned_cols=118 Identities=14% Similarity=0.172 Sum_probs=68.7
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccC-ccCcCC-----CC-HHHHHHHHHHHHHhhCC--CcE
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGT-TGEGQL-----MS-WDEHIMLIGHTVNCFGA--SVK 129 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~Gs-tGE~~~-----LT-~~Er~~li~~~v~~~~g--rvp 129 (359)
..||+-..+=-|.+ -..|.+...+.++.+++.|++-|=++|- |--+.. .+ .+|..+++.. ++.+.. ++|
T Consensus 30 vMGIlNvTpDSFsd-~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pv-I~~l~~~~~vp 107 (314)
T 3tr9_A 30 VMGIINVSPNSFYH-PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPV-IDAIKKRFPQL 107 (314)
T ss_dssp EEEEEECSTTCSBC-BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHH-HHHHHHHCCSE
T ss_pred EEEEEeCCCCchhh-ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHH-HHHHHhhCCCe
Confidence 56766665556765 5579999999999999999999999983 433322 33 4555555543 333322 456
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018253 130 VIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 191 (359)
Q Consensus 130 Viagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P 191 (359)
|-+-+. ..+. ++.|.++|++-+--+.-. . . + +-+..+++. .|+++-+..
T Consensus 108 ISIDT~--~~~V----a~aAl~aGa~iINDVsg~--~-~-~---~m~~v~a~~g~~vVlMh~~ 157 (314)
T 3tr9_A 108 ISVDTS--RPRV----MREAVNTGADMINDQRAL--Q-L-D---DALTTVSALKTPVCLMHFP 157 (314)
T ss_dssp EEEECS--CHHH----HHHHHHHTCCEEEETTTT--C-S-T---THHHHHHHHTCCEEEECCC
T ss_pred EEEeCC--CHHH----HHHHHHcCCCEEEECCCC--C-c-h---HHHHHHHHhCCeEEEECCC
Confidence 554433 3332 334444588855444221 1 1 1 334445554 688877643
No 403
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=69.71 E-value=49 Score=30.04 Aligned_cols=100 Identities=12% Similarity=0.040 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC--C
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV--G 153 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~--G 153 (359)
.|.+...++++.+++.|++-|=++|...+ -=..+|-.+++..+.+. -++|+.+-+. ..+. ++.|.++ |
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~--v~~~ee~~rvv~~i~~~--~~~pisIDT~--~~~v----~~aAl~a~~G 91 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAV--QDKVSAMEWLVEVTQEV--SNLTLCLDST--NIKA----IEAGLKKCKN 91 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC------CHHHHHHHHHHHHHTT--CCSEEEEECS--CHHH----HHHHHHHCSS
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCC--CChHHHHHHHHHHHHHh--CCCeEEEeCC--CHHH----HHHHHhhCCC
Confidence 68999999999999999999999984322 12456677777666543 2577766544 2322 2333333 8
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeC
Q 018253 154 MHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNV 190 (359)
Q Consensus 154 adav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~ 190 (359)
++-+--+.-. ++.+.+-+..+++. .|+++-++
T Consensus 92 a~iINdvs~~-----~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 92 RAMINSTNAE-----REKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp CEEEEEECSC-----HHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCEEEECCCC-----cccHHHHHHHHHHhCCcEEEEcC
Confidence 7665544211 34444556656655 68887765
No 404
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=69.70 E-value=18 Score=31.15 Aligned_cols=81 Identities=9% Similarity=0.131 Sum_probs=45.1
Q ss_pred CCCCEEEEc----cCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCC
Q 018253 91 NGAEGMIVG----GTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAVGMHAALHINPYY 164 (359)
Q Consensus 91 ~Gv~Gl~v~----GstGE~~~LT~~Er~~li~~~v~~~~grvpVia--gvg~~st~~ai~la~~a~~~Gadav~v~pP~y 164 (359)
.+++.+++. |.+|....-+.-++.+.++......+.+.|+++ |+... .++.+.++|+|++.+..+.|
T Consensus 130 ~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~-------~~~~~~~~Gad~vvvGsai~ 202 (220)
T 2fli_A 130 DLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNK-------TIRACYEAGANVFVAGSYLF 202 (220)
T ss_dssp TTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTT-------THHHHHHHTCCEEEESHHHH
T ss_pred hhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHH-------HHHHHHHcCCCEEEEChHHh
Confidence 558877542 344442222222444444444443333578665 34432 22233445999999999988
Q ss_pred CCCCHHHHHHHHHH
Q 018253 165 GKTSLEGLISHFDS 178 (359)
Q Consensus 165 ~~~s~~~l~~yf~~ 178 (359)
...+.++..+-+++
T Consensus 203 ~~~d~~~a~~~~~~ 216 (220)
T 2fli_A 203 KASDLVSQVQTLRT 216 (220)
T ss_dssp TSSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 77777665555544
No 405
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=69.61 E-value=28 Score=32.05 Aligned_cols=154 Identities=13% Similarity=0.090 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-----------ecCCCCHHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-----------NTGSNSTREAIH 144 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-----------gvg~~st~~ai~ 144 (359)
-|.+...++++.+++.+++|+++.+... +. ..++.+.+ .++||+. .|+..+.+.+..
T Consensus 110 ~~~~~~~~~~~~l~~~~vdGiI~~~~~~-----~~----~~~~~l~~---~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~ 177 (355)
T 3e3m_A 110 YSPEREEQLVETMLRRRPEAMVLSYDGH-----TE----QTIRLLQR---ASIPIVEIWEKPAHPIGHTVGFSNERAAYD 177 (355)
T ss_dssp TCHHHHHHHHHHHHHTCCSEEEEECSCC-----CH----HHHHHHHH---CCSCEEEESSCCSSCSSEEEECCHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCCEEEEeCCCC-----CH----HHHHHHHh---CCCCEEEECCccCCCCCCEEEeChHHHHHH
Confidence 3667778899999999999999976542 22 22222222 3567653 234445667778
Q ss_pred HHHHHHhCCCCEEEEcCCCCCC-C-CHHHHHHHHHHHHhc-CC---eEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEEec
Q 018253 145 ATEQGFAVGMHAALHINPYYGK-T-SLEGLISHFDSVLSM-GP---TIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKE 217 (359)
Q Consensus 145 la~~a~~~Gadav~v~pP~y~~-~-s~~~l~~yf~~Ia~a-~P---iiiYn~P~~tg~~ls~e~l~~La-~~pnivGiK~ 217 (359)
.+++..+.|-..+.++...... . ..+-...|.+.+.+. .+ .+.+..+..+ ..-..+.+.++. +.|.+.+|=-
T Consensus 178 a~~~L~~~G~r~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~ai~~ 256 (355)
T 3e3m_A 178 MTNALLARGFRKIVFLGEKDDDWTRGAARRAGFKRAMREAGLNPDQEIRLGAPPLS-IEDGVAAAELILQEYPDTDCIFC 256 (355)
T ss_dssp HHHHHHHTTCCSEEEEEESSCTTSHHHHHHHHHHHHHHHTTSCSCCEEEESCSSCC-HHHHHHHHHHHHHHCTTCCEEEE
T ss_pred HHHHHHHCCCCeEEEEccCcccChhHHHHHHHHHHHHHHCCcCCCccEEEecCCCC-HHHHHHHHHHHHcCCCCCcEEEE
Confidence 8889999998776655432222 2 234444455555554 32 3333221111 111124555655 4666666654
Q ss_pred cCchh--h----Hhhh---hCCceEEEecCCchhh
Q 018253 218 CVGND--R----VEHY---TGNGIVVWSGNDDQCH 243 (359)
Q Consensus 218 ss~d~--~----l~~~---~~~~~~v~~G~d~~~~ 243 (359)
.+... . +.+. .+.++.| .|.|+..+
T Consensus 257 ~nD~~A~g~~~al~~~G~~vP~disv-igfD~~~~ 290 (355)
T 3e3m_A 257 VSDMPAFGLLSRLKSIGVAVPEQVSV-VGFGNFEV 290 (355)
T ss_dssp SSHHHHHHHHHHHHHHTCCTTTTCEE-ECSSCCHH
T ss_pred CChHHHHHHHHHHHHcCCCCCCceEE-EEECChHH
Confidence 33222 1 2211 2357876 46666544
No 406
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=69.56 E-value=67 Score=30.67 Aligned_cols=145 Identities=11% Similarity=0.040 Sum_probs=97.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
.+.+.+.+.+....+.|.+++=+-... -+.++=.+.++.+.+.++.++++.+-+ ++.+.++++++++..++.|+
T Consensus 174 ~~~e~~~~~a~~~~~~Gf~~vKik~g~-----~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i 248 (398)
T 2pp0_A 174 TPLDQVLKNVVISRENGIGGIKLKVGQ-----PNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNL 248 (398)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCC-----SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTC
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCC-----CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 478889999999999999987764321 135666777888888888889998865 45689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC--chh---hHh
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RVE 225 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss--~d~---~l~ 225 (359)
+.+ --|.- ..+ .+.++.|.+. .||+.=. .-.+++.+.++.+ .-+++-+|-+- +-. ++.
T Consensus 249 ~~i--EqP~~-~~d----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~ 315 (398)
T 2pp0_A 249 IWI--EEPLD-AYD----IEGHAQLAAALDTPIATGE------MLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIM 315 (398)
T ss_dssp SCE--ECCSC-TTC----HHHHHHHHHHCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHH
T ss_pred cee--eCCCC-hhh----HHHHHHHHhhCCCCEEecC------CcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHH
Confidence 743 34431 112 4555666665 5776543 2346788888863 56888888642 222 333
Q ss_pred hhh-CCceEEEecC
Q 018253 226 HYT-GNGIVVWSGN 238 (359)
Q Consensus 226 ~~~-~~~~~v~~G~ 238 (359)
++. .-++.++.+.
T Consensus 316 ~~A~~~gi~~~~h~ 329 (398)
T 2pp0_A 316 DLAAKHGRKLAPHF 329 (398)
T ss_dssp HHHHHTTCEECCCS
T ss_pred HHHHHcCCeEeecC
Confidence 332 2456666543
No 407
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=69.23 E-value=36 Score=30.04 Aligned_cols=127 Identities=15% Similarity=0.082 Sum_probs=72.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-e----------cCCCCHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N----------TGSNSTREAIHA 145 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-g----------vg~~st~~ai~l 145 (359)
|.+...++++.+++.+++|+++.+... +. ..++. ....++||+. + |+....+.....
T Consensus 49 ~~~~~~~~~~~l~~~~vdgiIi~~~~~-----~~----~~~~~---~~~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a 116 (291)
T 3egc_A 49 DIVREREAVGQFFERRVDGLILAPSEG-----EH----DYLRT---ELPKTFPIVAVNRELRIPGCGAVLSENVRGARTA 116 (291)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCSS-----CC----HHHHH---SSCTTSCEEEESSCCCCTTCEEEEECHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCC-----Ch----HHHHH---hhccCCCEEEEecccCCCCCCEEEECcHHHHHHH
Confidence 667788999999999999999988754 11 12221 2234677653 2 223345667778
Q ss_pred HHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHH-Hhc-CC---e-EEEeCCCCCCCCCCHHHHHHHh-cCCCeEEEecc
Q 018253 146 TEQGFAVGMHAALHINPYYGKTSLEGLISHFDSV-LSM-GP---T-IIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKEC 218 (359)
Q Consensus 146 a~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~I-a~a-~P---i-iiYn~P~~tg~~ls~e~l~~La-~~pnivGiK~s 218 (359)
+++..+.|...+.++.......+..+-.+-|++. .+. .+ . +.+... ...-..+.+.++. +.|.+-+|=-.
T Consensus 117 ~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~ai~~~ 193 (291)
T 3egc_A 117 VEYLIARGHTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGGV---RADNGRDGAIKVLTGADRPTALLTS 193 (291)
T ss_dssp HHHHHHTTCCSEEEECSCTTSHHHHHHHHHHHHHHHHTTCCCCGGGEEC---------CCHHHHHHHHTC-CCCSEEEES
T ss_pred HHHHHHcCCCEEEEEeCCCCCcCHHHHHHHHHHHHHHcCCCCCHHHeEeCCC---ChhHHHHHHHHHHhCCCCCcEEEEC
Confidence 8888889987777665443223334444444444 443 32 1 333211 1223346677776 56777766543
No 408
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=68.78 E-value=69 Score=29.11 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=69.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCC-CC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG-MH 155 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~G-ad 155 (359)
|+++-+..+++|++.|..-|.+.+.. ....+..+|.+-++.+.+..+- +.+...+..+.+++.+.++...+.+ .|
T Consensus 158 ~~~~~~~a~~~L~~~G~~~I~~i~~~--~~~~~~~~R~~Gf~~al~~~g~--~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 233 (333)
T 3jvd_A 158 DEAGFFQLTESVLGGSGMNIAALVGE--ESLSTTQERMRGISHAASIYGA--EVTFHFGHYSVESGEEMAQVVFNNGLPD 233 (333)
T ss_dssp HHHHHHHHHHHHCCSSSCEEEEEESC--TTSHHHHHHHHHHHHHHHHTTC--EEEEEECCSSHHHHHHHHHHHHHTCCCS
T ss_pred hHHHHHHHHHHHHHCCCCeEEEEeCC--CCCccHHHHHHHHHHHHHHCCC--CEEEecCCCCHHHHHHHHHHHhcCCCCc
Confidence 45678888999999999988776654 2344678899888888877643 3444446678888888888877655 78
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc---CC----eEEEeC
Q 018253 156 AALHINPYYGKTSLEGLISHFDSVLSM---GP----TIIYNV 190 (359)
Q Consensus 156 av~v~pP~y~~~s~~~l~~yf~~Ia~a---~P----iiiYn~ 190 (359)
+++.. +..-...-++.+.+. .| |+-||.
T Consensus 234 ai~~~-------nd~~A~g~~~al~~~G~~vP~disvig~D~ 268 (333)
T 3jvd_A 234 ALIVA-------SPRLMAGVMRAFTRLNVRVPHDVVIGGYDD 268 (333)
T ss_dssp EEEEC-------CHHHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred EEEEC-------CHHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 88774 433333334444433 34 676764
No 409
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=68.73 E-value=19 Score=31.24 Aligned_cols=57 Identities=14% Similarity=0.138 Sum_probs=32.2
Q ss_pred HHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcC
Q 018253 86 NMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 161 (359)
Q Consensus 86 ~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~p 161 (359)
+...+.|++++.+ |..-+ .. ..+.+..+ . +++|++..+..+ ++.+.+.|+|.+++.+
T Consensus 88 ~~a~~~gad~v~l-~~~~~----~~-------~~~~~~~g-~--~~~~~s~~t~~e----~~~a~~~g~d~v~~~~ 144 (227)
T 2tps_A 88 ELALNLKADGIHI-GQEDA----NA-------KEVRAAIG-D--MILGVSAHTMSE----VKQAEEDGADYVGLGP 144 (227)
T ss_dssp HHHHHHTCSEEEE-CTTSS----CH-------HHHHHHHT-T--SEEEEEECSHHH----HHHHHHHTCSEEEECC
T ss_pred HHHHHcCCCEEEE-CCCcc----CH-------HHHHHhcC-C--cEEEEecCCHHH----HHHHHhCCCCEEEECC
Confidence 4456678898876 43321 21 22223232 2 456665555555 3456678999998853
No 410
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=68.71 E-value=13 Score=35.78 Aligned_cols=131 Identities=12% Similarity=0.061 Sum_probs=73.1
Q ss_pred EeeecCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCC--CHHHHHHHHHHHHHhhCCCcEEEEecCC----
Q 018253 64 TAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLM--SWDEHIMLIGHTVNCFGASVKVIGNTGS---- 136 (359)
Q Consensus 64 ~al~TPF~~dg~-ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~L--T~~Er~~li~~~v~~~~grvpViagvg~---- 136 (359)
|.++.|++- |+ ...+-.+.+.+-..+.|+... +||.... ..+.+.. .+.+.+ .+..+|++++++.
T Consensus 61 Pv~ia~MtG-gt~~~~~in~~la~~a~~~G~~~~-----vGs~~~~l~~~~~~~s-~~~vr~-~ap~~~~~anlg~~ql~ 132 (368)
T 3vkj_A 61 PVMVTGMTG-GRNELGRINKIIAEVAEKFGIPMG-----VGSQRVAIEKAEARES-FAIVRK-VAPTIPIIANLGMPQLV 132 (368)
T ss_dssp SEEECCCCC-SSHHHHHHHHHHHHHHHHHTCCEE-----CCCCHHHHHCGGGSHH-HHHHHH-HCSSSCEEEEEEGGGGG
T ss_pred CeEEecCCC-CCchhhHHHHHHHHHHHHhCCCee-----eecchhccCCHHHHhh-HHHHHH-hCcCcceecCcCeeecC
Confidence 556667763 43 334455666666667787643 3454322 1221222 122333 4567899998887
Q ss_pred --CCHHHHHHHHHHHHhCCCCEEEEcCCCC-------CCCCHH-HHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHH
Q 018253 137 --NSTREAIHATEQGFAVGMHAALHINPYY-------GKTSLE-GLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIH 204 (359)
Q Consensus 137 --~st~~ai~la~~a~~~Gadav~v~pP~y-------~~~s~~-~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~ 204 (359)
.+.+++.+.++.+ ++|+..+--... ...+.. +..+..+.|.+. .||++=- .|..++++..+
T Consensus 133 ~~~~~~~~~~av~~~---~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~----vG~g~s~~~A~ 205 (368)
T 3vkj_A 133 KGYGLKEFQDAIQMI---EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKE----SGNGISMETAK 205 (368)
T ss_dssp TTCCHHHHHHHHHHT---TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEEC----SSSCCCHHHHH
T ss_pred CCCCHHHHHHHHHHh---cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEe----CCCCCCHHHHH
Confidence 3455554544443 666665542211 011111 467777777776 6998863 56668999888
Q ss_pred HHhcC
Q 018253 205 TMAQS 209 (359)
Q Consensus 205 ~La~~ 209 (359)
++.+.
T Consensus 206 ~l~~a 210 (368)
T 3vkj_A 206 LLYSY 210 (368)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 88753
No 411
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=68.66 E-value=6.6 Score=33.82 Aligned_cols=78 Identities=12% Similarity=0.017 Sum_probs=47.7
Q ss_pred HHCCCCEE-EEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCC
Q 018253 89 IVNGAEGM-IVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG--NTGSNSTREAIHATEQGFAVGMHAALHINPYYG 165 (359)
Q Consensus 89 i~~Gv~Gl-~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia--gvg~~st~~ai~la~~a~~~Gadav~v~pP~y~ 165 (359)
.+.|++-+ +..+.++.+...+..+ +.++.+.+. ++|+++ |+... .++.+.++|||++.+..+.+.
T Consensus 124 ~~~g~d~v~~~~~~~~~~~g~~~~~--~~i~~~~~~---~~pi~v~GGI~~~-------~~~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 124 RALGAKFVEMHAGLDEQAKPGFDLN--GLLAAGEKA---RVPFSVAGGVKVA-------TIPAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp HHTTCSEEEEECCHHHHTSTTCCTH--HHHHHHHHH---TSCEEEESSCCGG-------GHHHHHHTTCSEEEESHHHHT
T ss_pred HHhCCCEEEEEecccccccCCCchH--HHHHHhhCC---CCCEEEECCcCHH-------HHHHHHHcCCCEEEEeeeccC
Confidence 35589988 7666655444444444 334444432 467655 44422 445557799999999988887
Q ss_pred CCCHHHHHHHHHH
Q 018253 166 KTSLEGLISHFDS 178 (359)
Q Consensus 166 ~~s~~~l~~yf~~ 178 (359)
..+..+..+-|++
T Consensus 192 ~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 192 AADPAAAAKELRA 204 (207)
T ss_dssp SSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 7676665555543
No 412
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=68.63 E-value=19 Score=36.58 Aligned_cols=122 Identities=16% Similarity=0.089 Sum_probs=72.7
Q ss_pred CCceEEeeecCCCCCCCC--CHHHHHHHHHHHHHCC-----CCEEEEcc-CccCc-CCCC-HHHHHHHHHHHHHhhC---
Q 018253 59 ALRLITAIKTPYLPDGRF--DLEAYDDLVNMQIVNG-----AEGMIVGG-TTGEG-QLMS-WDEHIMLIGHTVNCFG--- 125 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~I--D~~~l~~li~~li~~G-----v~Gl~v~G-stGE~-~~LT-~~Er~~li~~~v~~~~--- 125 (359)
..||+-..+=-|.+.|+. |.+...++++.+++.| ++=|=++| ||.-+ ...+ .+|..+++-.+.....
T Consensus 227 iMGIlNvTPDSFsDGG~~~~~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~ 306 (545)
T 2bmb_A 227 IMAIFNATPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTE 306 (545)
T ss_dssp EEEEEECSCSSTTTTTTTTTCHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSS
T ss_pred EEEEEeCCCCCCcCCCcCcCCHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcc
Confidence 556665433338877875 8999999999999999 99999988 55333 3344 4555555544433321
Q ss_pred -CCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeC
Q 018253 126 -ASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNV 190 (359)
Q Consensus 126 -grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~ 190 (359)
....+.+.|-+...+ -++.|.++|||-|-=+.=. ... + +-+..+++. .|+++-+.
T Consensus 307 ~~~~~vpISIDT~~a~----VaeaAl~aGadIINDVsg~--~~d-~---~m~~vva~~~~~~vVlmH~ 364 (545)
T 2bmb_A 307 LPQDKVILSIDTYRSN----VAKEAIKVGVDIINDISGG--LFD-S---NMFAVIAENPEICYILSHT 364 (545)
T ss_dssp SCGGGEEEEEECCCHH----HHHHHHHTTCCEEEETTTT--SSC-T---THHHHHHTCTTSEEEEECC
T ss_pred ccCCCCeEEEeCCcHH----HHHHHHHcCCCEEEeCCCC--cCC-h---HHHHHHHHhCCCeEEEECC
Confidence 112344445443333 3455666799876544221 112 2 335566666 68887765
No 413
>5rub_A Rubisco (ribulose-1,5-bisphosphate carboxylase(slash)oxygenase); lyase(carbon-carbon); 1.70A {Rhodospirillum rubrum} SCOP: c.1.14.1 d.58.9.1 PDB: 1rus_A 2rus_A 9rub_A* 1rba_A
Probab=68.58 E-value=34 Score=34.14 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=64.6
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHh----hCCCcEEEEecCCCCHHHHH
Q 018253 68 TPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC----FGASVKVIGNTGSNSTREAI 143 (359)
Q Consensus 68 TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~----~~grvpViagvg~~st~~ai 143 (359)
|-+++.--+.-+.+.+++-.+...| |-+====.-+....+.++||...+-.+++. ++.++--.+++++.+++|.+
T Consensus 187 tiiKPklGLsp~~~a~~~ye~~~GG-DfiKDDE~l~sQpf~p~~eR~~~v~eAi~rA~~eTGe~k~y~~NITa~~~~eM~ 265 (490)
T 5rub_A 187 TIIKPKLGLRPKPFAEACHAFWLGG-DFIKNDEPQGNQPFAPLRDTIALVADAMRRAQDETGEAKLFSANITADDPFEII 265 (490)
T ss_dssp EECSSSSCCCHHHHHHHHHHHTTTC-SEEECCTTCSCBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEECCCSSHHHHH
T ss_pred EEeccccCCCHHHHHHHHHHHHhcC-CcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCceeEEeccCCCCHHHHH
Confidence 3345444588999999998888776 643111133456778999998877666654 34444456799988899999
Q ss_pred HHHHHHHhC-CCC----EEEE
Q 018253 144 HATEQGFAV-GMH----AALH 159 (359)
Q Consensus 144 ~la~~a~~~-Gad----av~v 159 (359)
++++.|++. |++ ++|+
T Consensus 266 ~RAe~a~e~~G~~~g~~~vMv 286 (490)
T 5rub_A 266 ARGEYVLETFGENASHVALLV 286 (490)
T ss_dssp HHHHHHHHHHGGGGGGEEEEE
T ss_pred HHHHHHHHhcCCccCceEEEE
Confidence 999999996 765 5565
No 414
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=68.43 E-value=67 Score=28.84 Aligned_cols=125 Identities=8% Similarity=0.004 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcC---CCCHHHHHHHHHHHHHhhCCCc-EEEEec------CCCC--------HHH
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQ---LMSWDEHIMLIGHTVNCFGASV-KVIGNT------GSNS--------TRE 141 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~---~LT~~Er~~li~~~v~~~~grv-pViagv------g~~s--------t~~ 141 (359)
.+...++...+.|.+++=+....-..+ .++.++..++-+.+.+ . .+ .+.++. .+.+ .+.
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~--gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~ 95 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQA-H--GIEEIVVHAPYIINIGNTTNLDTFSLGVDF 95 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHH-T--TCCEEEEECCTTCCTTCSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHH-c--CCceEEEeccccccCCCCCcHHHHHHHHHH
Confidence 567778888899999988743332222 2445555555544433 2 23 344432 2222 333
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCCCCCH-H---HHHHHHHHHHhc---CCeEEEeCCCCCCCC-CCHHHHHHHh
Q 018253 142 AIHATEQGFAVGMHAALHINPYYGKTSL-E---GLISHFDSVLSM---GPTIIYNVPSRTGQD-IPPRVIHTMA 207 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~pP~y~~~s~-~---~l~~yf~~Ia~a---~PiiiYn~P~~tg~~-ls~e~l~~La 207 (359)
..+.++.|+++|+..+.+.|.++...+. + .+.+.++.+++. +.+.+=|.|.....- -+++.+.+|.
T Consensus 96 ~~~~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~t~~~~~~li 169 (303)
T 3aal_A 96 LRAEIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFEELAYII 169 (303)
T ss_dssp HHHHHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCCCHHHHHHHH
Confidence 4456678889999998877665433233 2 344455555542 356677776332222 2788888876
No 415
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=68.42 E-value=11 Score=34.47 Aligned_cols=129 Identities=15% Similarity=0.134 Sum_probs=74.8
Q ss_pred eeecCCCCCC---CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHH
Q 018253 65 AIKTPYLPDG---RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTRE 141 (359)
Q Consensus 65 al~TPF~~dg---~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ 141 (359)
+++=|=..|. +.+++.+.+-++.+.+.|++||+++.-|-++ .+..+--++|++. +. ..++..+=.-..+.+
T Consensus 56 vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg-~iD~~~~~~Li~~----a~-~~~vTFHRAfD~~~d 129 (256)
T 1twd_A 56 PIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDG-NVDMPRMEKIMAA----AG-PLAVTFHRAFDMCAN 129 (256)
T ss_dssp EBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-SBCHHHHHHHHHH----HT-TSEEEECGGGGGCSC
T ss_pred EEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC-CcCHHHHHHHHHH----hC-CCcEEEECchhccCC
Confidence 4455633332 3567778888889999999999887777765 4565555555543 33 468887643222334
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHh
Q 018253 142 AIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMA 207 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La 207 (359)
..+..+...++|++.|+-.- ...+-.+=....+++.+. ..|.|- .|-.++++-+.+|.
T Consensus 130 ~~~ale~L~~lG~~rILTSG---~~~~a~~g~~~L~~Lv~~a~~i~Im-----~GgGv~~~Ni~~l~ 188 (256)
T 1twd_A 130 PLYTLNNLAELGIARVLTSG---QKSDALQGLSKIMELIAHRDAPIIM-----AGAGVRAENLHHFL 188 (256)
T ss_dssp HHHHHHHHHHHTCCEEEECT---TSSSTTTTHHHHHHHHTSSSCCEEE-----EESSCCTTTHHHHH
T ss_pred HHHHHHHHHHcCCCEEECCC---CCCCHHHHHHHHHHHHHhhCCcEEE-----ecCCcCHHHHHHHH
Confidence 44556666678999999652 222323334444555442 122221 23445666666664
No 416
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=68.24 E-value=41 Score=31.71 Aligned_cols=124 Identities=8% Similarity=-0.001 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
-+.+.+.+.++.+++.|.+.+=+--.. +.++=.+.++.+++.++.++++++=+ ++-+.++++++++..++.|.
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~------~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i 212 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCG------DEEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGI 212 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCC------CHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCC
Confidence 367888889999999999987664321 56777888899999998899999865 46689999999999999988
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc---CCCeEEEecc
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ---SPNLAGVKEC 218 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~---~pnivGiK~s 218 (359)
+.+ --|.. ..+ .+.+++|.+. .||..=. .-.+++.+.++.+ .-.++-+|-+
T Consensus 213 ~~i--EqP~~-~~d----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~~~~~~~~d~v~~k~~ 268 (356)
T 3ro6_B 213 EFI--EQPFP-AGR----TDWLRALPKAIRRRIAADE------SLLGPADAFALAAPPAACGIFNIKLM 268 (356)
T ss_dssp CCE--ECCSC-TTC----HHHHHTSCHHHHHTEEEST------TCCSHHHHHHHHSSSCSCSEEEECHH
T ss_pred CEE--ECCCC-CCc----HHHHHHHHhcCCCCEEeCC------cCCCHHHHHHHHhcCCcCCEEEEccc
Confidence 655 34442 112 3445556554 5877632 2356788888875 5678888864
No 417
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=68.19 E-value=63 Score=28.44 Aligned_cols=135 Identities=12% Similarity=-0.036 Sum_probs=73.5
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe------cCCCC-------HHHHHHHHH
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN------TGSNS-------TREAIHATE 147 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag------vg~~s-------t~~ai~la~ 147 (359)
+...++.+.+.|.+||=+....... .+.++..++.+. .+..+=++..+.+ .++.+ .+...+.++
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~--~~~~~~~~~~~~-l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~ 95 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHN--LSDAKKRELKAV-ADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLD 95 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGG--SCHHHHHHHHHH-HHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCCccc--cchhhHHHHHHH-HHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5677777888999999876554322 234444444444 4444323333322 12222 245667777
Q ss_pred HHHhCCCCEEEEcC----CC--C-CC-CCHH---HHHHHHHHHHhc-----CCeEEEeCCCC-CCCCCCHHHHHHHhc--
Q 018253 148 QGFAVGMHAALHIN----PY--Y-GK-TSLE---GLISHFDSVLSM-----GPTIIYNVPSR-TGQDIPPRVIHTMAQ-- 208 (359)
Q Consensus 148 ~a~~~Gadav~v~p----P~--y-~~-~s~~---~l~~yf~~Ia~a-----~PiiiYn~P~~-tg~~ls~e~l~~La~-- 208 (359)
.|+++|+..+.+.. .. + .. ..++ .+.+.++++++. +.+.+-|.+.. +..--+++.+.+|.+
T Consensus 96 ~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~~ 175 (290)
T 2qul_A 96 DCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFEQWLCNDAKEAIAFADAV 175 (290)
T ss_dssp HHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCccccccccCCHHHHHHHHHHc
Confidence 88899999887521 11 2 11 2333 345555555442 46778887632 222236777777763
Q ss_pred -CCCeEEEecc
Q 018253 209 -SPNLAGVKEC 218 (359)
Q Consensus 209 -~pnivGiK~s 218 (359)
.|++.-.=|.
T Consensus 176 ~~~~~g~~~D~ 186 (290)
T 2qul_A 176 DSPACKVQLDT 186 (290)
T ss_dssp CCTTEEEEEEH
T ss_pred CCCCEEEEEEc
Confidence 4676444343
No 418
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=68.11 E-value=20 Score=32.97 Aligned_cols=84 Identities=21% Similarity=0.190 Sum_probs=50.3
Q ss_pred CcEEEEecCCC-CHHHHHHHHHHHHhCCCCEEEEc------CCC-CCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCC
Q 018253 127 SVKVIGNTGSN-STREAIHATEQGFAVGMHAALHI------NPY-YGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQ 196 (359)
Q Consensus 127 rvpViagvg~~-st~~ai~la~~a~~~Gadav~v~------pP~-y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~ 196 (359)
+.-||+|.++. |.+.++++++.++++|+|++-.. .|+ |..+..++ .+.++++++. +|++-=
T Consensus 38 ~~~vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~g-l~~l~~~~~~~Gl~~~te-------- 108 (276)
T 1vs1_A 38 SKAVIAGPCSVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEG-LKLLRRAGDEAGLPVVTE-------- 108 (276)
T ss_dssp BCEEEEECSBCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHH-HHHHHHHHHHHTCCEEEE--------
T ss_pred CeEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHH-HHHHHHHHHHcCCcEEEe--------
Confidence 45689988755 88999999999999999986442 233 22234444 4455555554 566531
Q ss_pred CCCHHHHHHHhcCCCeEEEeccCch
Q 018253 197 DIPPRVIHTMAQSPNLAGVKECVGN 221 (359)
Q Consensus 197 ~ls~e~l~~La~~pnivGiK~ss~d 221 (359)
.++++.+.-|+++ +-.+|..+.+
T Consensus 109 ~~d~~~~~~l~~~--vd~~kIgs~~ 131 (276)
T 1vs1_A 109 VLDPRHVETVSRY--ADMLQIGARN 131 (276)
T ss_dssp CCCGGGHHHHHHH--CSEEEECGGG
T ss_pred cCCHHHHHHHHHh--CCeEEECccc
Confidence 1233333333333 3456776665
No 419
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=68.10 E-value=47 Score=31.53 Aligned_cols=126 Identities=13% Similarity=-0.001 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhC-C
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAV-G 153 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~-G 153 (359)
+|.+.+.+.+...++.|.+++=+-...+ +.++=.+.++.+++.++.++++.+-+ ++.+.++++++++..++. |
T Consensus 138 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~-----~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~ 212 (382)
T 2gdq_A 138 QWISRSVSNVEAQLKKGFEQIKVKIGGT-----SFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTN 212 (382)
T ss_dssp THHHHHHHHHHHHHTTTCCEEEEECSSS-----CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSC
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEcCCCC-----CHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccC
Confidence 3448888888888999999987654321 45666788888888888889998865 456899999999999988 7
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC
Q 018253 154 MHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 219 (359)
Q Consensus 154 adav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss 219 (359)
.+. +--|.- ..+ .+.+++|.+. .||+.=. .-.+++.+.++.+ .-+++-+|-+-
T Consensus 213 i~~--iEqP~~-~~d----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 269 (382)
T 2gdq_A 213 IGW--LEEPLP-FDQ----PQDYAMLRSRLSVPVAGGE------NMKGPAQYVPLLSQRCLDIIQPDVMH 269 (382)
T ss_dssp EEE--EECCSC-SSC----HHHHHHHHTTCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCCTTT
T ss_pred CeE--EECCCC-ccc----HHHHHHHHhhCCCCEEecC------CcCCHHHHHHHHHcCCCCEEecCccc
Confidence 653 445532 112 4556677765 5766532 2356788888873 56888899754
No 420
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=68.08 E-value=16 Score=33.50 Aligned_cols=27 Identities=11% Similarity=0.112 Sum_probs=13.7
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCCE
Q 018253 130 VIGNTGSNSTREAIHATEQGFAVGMHA 156 (359)
Q Consensus 130 Viagvg~~st~~ai~la~~a~~~Gada 156 (359)
|+.++...+.++..++.+.+.+.|.+.
T Consensus 139 VlLi~a~l~~~~l~~l~~~a~~lGl~~ 165 (272)
T 3qja_A 139 LLLIVAALEQSVLVSMLDRTESLGMTA 165 (272)
T ss_dssp EEEEGGGSCHHHHHHHHHHHHHTTCEE
T ss_pred EEEecccCCHHHHHHHHHHHHHCCCcE
Confidence 334444444555555555555555554
No 421
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=67.95 E-value=59 Score=30.14 Aligned_cols=81 Identities=9% Similarity=0.034 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCH--------------HHHH
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST--------------REAI 143 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st--------------~~ai 143 (359)
.+.+.+.++.+.+.|++-|++=-..| +.=|.++-.++++...+...-..|+++|++.-|. ..+.
T Consensus 176 ~~~l~~~i~~a~~~Gi~~IilDPG~G--f~kt~~~n~~ll~~l~~~~~~g~Pvl~G~Srksfig~l~g~p~~~~R~~~t~ 253 (294)
T 2dqw_A 176 KAFLEAQARRALSAGVPQVVLDPGFG--FGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVEDPAQRVHGSV 253 (294)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECCTT--SSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHHTCCSGGGCHHHHH
T ss_pred HHHHHHHHHHHHHCCCCcEEEcCCCC--cccCHHHHHHHHHHHHHHhcCCCCEEEEeccchhhhhhcCCCchhhhHHHHH
Confidence 56788999999999998776655444 4558888899998887665567899999987443 4567
Q ss_pred HHHHHHHhCCCCEEEEc
Q 018253 144 HATEQGFAVGMHAALHI 160 (359)
Q Consensus 144 ~la~~a~~~Gadav~v~ 160 (359)
.++-.|...|++-+-+.
T Consensus 254 a~~~~a~~~Ga~IvRvH 270 (294)
T 2dqw_A 254 AAHLFAVMKGVRLLRVH 270 (294)
T ss_dssp HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHcCCcEEEcC
Confidence 77788889999755443
No 422
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=67.93 E-value=15 Score=34.36 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHh
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFA 151 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~ 151 (359)
.++.+.-.++++..++..=+--++.|+.+. +.+|-.++.+.+.+.-...+-++.--.-.+.++.++.-+...+
T Consensus 57 ~Lt~~Er~~v~~~~v~~~grvpViaGvg~~----~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~ 129 (313)
T 3dz1_A 57 KLDAAEAEAVATRFIKRAKSMQVIVGVSAP----GFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATE 129 (313)
T ss_dssp GSCHHHHHHHHHHHHHHCTTSEEEEECCCS----SHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEecCCC----CHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHH
Confidence 477777777777777643111233344333 6777777777766642222222211222355556655555443
No 423
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=67.89 E-value=13 Score=42.22 Aligned_cols=89 Identities=10% Similarity=0.082 Sum_probs=55.3
Q ss_pred HHHHHCCCCEEEEccCccC----------cCCCCHHHHHHHHHHHHHhh-----CCCcEEEEecCCCCHHHHHHHHHHHH
Q 018253 86 NMQIVNGAEGMIVGGTTGE----------GQLMSWDEHIMLIGHTVNCF-----GASVKVIGNTGSNSTREAIHATEQGF 150 (359)
Q Consensus 86 ~~li~~Gv~Gl~v~GstGE----------~~~LT~~Er~~li~~~v~~~-----~grvpViagvg~~st~~ai~la~~a~ 150 (359)
..+.++|+|+|.+-|..|= ..-++.. ..+..+.+.+ .+++|||+.=|=.+-.+++ .|.
T Consensus 1046 ~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~---~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVa----kAL 1118 (1520)
T 1ofd_A 1046 AGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWE---LGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVV----MAA 1118 (1520)
T ss_dssp HHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHH---HHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHH----HHH
T ss_pred HHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHH---HHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHH----HHH
Confidence 3456789999999766431 1123443 3333333332 3489999854434555554 455
Q ss_pred hCCCCEEEEcCCCCC------------------------------CCCHHHHHHHHHHHHh
Q 018253 151 AVGMHAALHINPYYG------------------------------KTSLEGLISHFDSVLS 181 (359)
Q Consensus 151 ~~Gadav~v~pP~y~------------------------------~~s~~~l~~yf~~Ia~ 181 (359)
.+|||+|.+-.++.. ....+.+..|++.+++
T Consensus 1119 aLGAdaV~iGTafL~algc~~~r~Ch~~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ 1179 (1520)
T 1ofd_A 1119 LMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAE 1179 (1520)
T ss_dssp HTTCSEEECSHHHHHHTTCCCCCCGGGTCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HcCCCeeEEcHHHHHHHHHHHHHhccCCCCCceeEeeCHHHHhhcCCcHHHHHHHHHHHHH
Confidence 689999999876532 2357888888888764
No 424
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=67.62 E-value=9.8 Score=34.91 Aligned_cols=123 Identities=7% Similarity=-0.081 Sum_probs=69.8
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
.+.+++.+-+.||++.++.+.. ....|-..+++.+ +. .+++--++|+-.....++.+..++..+.|+-||=..
T Consensus 36 ~~~ll~~~~~~GV~~~V~v~~~-----~~~~~n~~l~~la-~~-~p~~~g~vg~v~~~~~~~~~~L~~l~~~gv~Gir~~ 108 (303)
T 4do7_A 36 PDALHPLMHAQALGASIAVQAR-----AGRDETAFLLELA-CD-EARIAAVVGWEDLRAPQLAERVAEWRGTKLRGFRHQ 108 (303)
T ss_dssp HHHHHHHHHHTTCCEEEEECCS-----SSHHHHHHHHHHH-TT-CTTEEEEEECCCTTCTTHHHHHTTCCSSCEEEEECC
T ss_pred HHHHHHHHHhcCCcEEEEEccC-----CcHHHHHHHHHHH-Hh-CCCeEEEEEEeCCCCchHHHHHHHHhhcCceEEEec
Confidence 3455666668999998887764 2455666666643 22 235444445322222224444444446788888765
Q ss_pred CCCCCC-----CCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEEec
Q 018253 161 NPYYGK-----TSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKE 217 (359)
Q Consensus 161 pP~y~~-----~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La-~~pnivGiK~ 217 (359)
+.+.. .+.+.+..+++.+++. .|+.++-.+. .++.+.+++ ++|++.=|=+
T Consensus 109 -~~~~~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~------~l~~l~~ll~~~P~l~iVi~ 165 (303)
T 4do7_A 109 -LQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFER------QLPDVQAFCARHDAHWLVLD 165 (303)
T ss_dssp -GGGSSCHHHHHHCHHHHHHHHHHHHTTCEEEECCCGG------GHHHHHHHHHHCCSSCEEEG
T ss_pred -CcCCCCccccccCHHHHHHHHHHHHCCCeEEEecCHH------HHHHHHHHHHHCCCCCEEEe
Confidence 33322 1224566777777665 7999986542 245566666 6886554444
No 425
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=67.51 E-value=25 Score=30.18 Aligned_cols=67 Identities=13% Similarity=0.121 Sum_probs=39.1
Q ss_pred HHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC
Q 018253 87 MQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGK 166 (359)
Q Consensus 87 ~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~ 166 (359)
...+.|++.+.++.+. .++ .+.++.+.+..+.++||++. |+-+.++. +.+.++|||++.+..-.|..
T Consensus 116 ~a~~~G~d~v~v~~t~----~~g----~~~~~~l~~~~~~~ipvia~-GGI~~~~i----~~~~~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 116 TALEAGAQALKIFPSS----AFG----PQYIKALKAVLPSDIAVFAV-GGVTPENL----AQWIDAGCAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHTTCSEEEETTHH----HHC----HHHHHHHHTTSCTTCEEEEE-SSCCTTTH----HHHHHHTCSEEEECTTTCCT
T ss_pred HHHHCCCCEEEEecCC----CCC----HHHHHHHHHhccCCCeEEEe-CCCCHHHH----HHHHHcCCCEEEEChHHhCC
Confidence 3467899998875421 112 34445555544436898873 22333222 33345799999999766653
No 426
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=67.46 E-value=36 Score=32.47 Aligned_cols=142 Identities=11% Similarity=0.093 Sum_probs=97.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCC
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~G 153 (359)
.-|.+.+.+.++.+++.|.+.+=+--.. ..++=.+.++.+++.++.++++++=+ ++-+.++++++++..++.|
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~iKiK~G~------~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~ 216 (378)
T 3eez_A 143 AKSVEETRAVIDRYRQRGYVAHSVKIGG------DVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLH 216 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGT
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEeccCC------CHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCC
Confidence 3577889999999999999987764322 56777788888888888889998865 4568999999999999988
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC--chh---hH
Q 018253 154 MHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RV 224 (359)
Q Consensus 154 adav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss--~d~---~l 224 (359)
+ ++--|.- + .+.++.+.+. .||+.= ..-.+++.+.++.+ .-.++-+|-+. |-. ++
T Consensus 217 i---~iEqP~~---~----~~~~~~l~~~~~iPIa~d------E~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 217 V---MFEQPGE---T----LDDIAAIRPLHSAPVSVD------ECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp C---CEECCSS---S----HHHHHHTGGGCCCCEEEC------TTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred e---EEecCCC---C----HHHHHHHHhhCCCCEEEC------CCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHH
Confidence 6 3444543 3 3445677766 576653 22456888888873 46788899643 222 34
Q ss_pred hhhh-CCceEEEecC
Q 018253 225 EHYT-GNGIVVWSGN 238 (359)
Q Consensus 225 ~~~~-~~~~~v~~G~ 238 (359)
.++. .-++.++.|.
T Consensus 281 a~~A~~~g~~~~~~~ 295 (378)
T 3eez_A 281 RDIALTHGIDMFVMA 295 (378)
T ss_dssp HHHHHHTTCEEEEEC
T ss_pred HHHHHHcCCEEEcCC
Confidence 3332 2456776553
No 427
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=67.37 E-value=11 Score=33.46 Aligned_cols=98 Identities=17% Similarity=0.182 Sum_probs=58.5
Q ss_pred eecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEE-EecCCCCHHHHHH
Q 018253 66 IKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNTGSNSTREAIH 144 (359)
Q Consensus 66 l~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVi-agvg~~st~~ai~ 144 (359)
++|-++..+..|+.. .++.+...+.|++|+++.+ |..+..+.+ .+..+. ..++ -|++...-
T Consensus 110 vLts~s~~~~~~~~~-~~~a~~a~~~g~~GvV~sa--------t~p~e~~~i---r~~~~~-~~~vtPGI~~~g~----- 171 (222)
T 4dbe_A 110 LVAVMSHEGWSTLFA-DYIKNVIREISPKGIVVGG--------TKLDHITQY---RRDFEK-MTIVSPGMGSQGG----- 171 (222)
T ss_dssp EEEECSSTTCCCTTH-HHHHHHHHHHCCSEEEECT--------TCHHHHHHH---HHHCTT-CEEEECCBSTTSB-----
T ss_pred EEEeCCCcchHHHHH-HHHHHHHHHhCCCEEEECC--------CCHHHHHHH---HHhCCC-CEEEcCCcccCcc-----
Confidence 677777766555432 4556655678999988654 222333333 344444 4444 37875521
Q ss_pred HHHHHHhCCCCEEEEcCCCCCCCCHHH-HHHHHHHHHh
Q 018253 145 ATEQGFAVGMHAALHINPYYGKTSLEG-LISHFDSVLS 181 (359)
Q Consensus 145 la~~a~~~Gadav~v~pP~y~~~s~~~-l~~yf~~Ia~ 181 (359)
-.+.|.+.|+|.+++--|.|...++.+ ..++.+++.+
T Consensus 172 tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i~~ 209 (222)
T 4dbe_A 172 SYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIED 209 (222)
T ss_dssp CTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHHHH
Confidence 133445689999999999888777644 4445454443
No 428
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=67.37 E-value=13 Score=34.89 Aligned_cols=85 Identities=8% Similarity=0.037 Sum_probs=48.6
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcE-EEEecCCC--CHHHHHH--HHHHHHhCCCCE
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVK-VIGNTGSN--STREAIH--ATEQGFAVGMHA 156 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvp-Viagvg~~--st~~ai~--la~~a~~~Gada 156 (359)
.++.+...+.|++|+++. ..| ++.+.+..+...- |.-|++.. +..+.-+ -.+.+.++|+|.
T Consensus 161 ~~lA~~a~~~G~dGvV~s----------~~E----~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~ 226 (303)
T 3ru6_A 161 INFSKISYENGLDGMVCS----------VFE----SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDY 226 (303)
T ss_dssp HHHHHHHHHTTCSEEECC----------TTT----HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEC----------HHH----HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCE
Confidence 344444557899997752 122 2344455554432 33488743 2333322 456677899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHHH
Q 018253 157 ALHINPYYGKTSLEGLISHFDSVL 180 (359)
Q Consensus 157 v~v~pP~y~~~s~~~l~~yf~~Ia 180 (359)
+++-.|.|...++.+..+-+++..
T Consensus 227 iVvGr~I~~a~dp~~a~~~i~~~i 250 (303)
T 3ru6_A 227 IVVGRPIYKNENPRAVCEKILNKI 250 (303)
T ss_dssp EEECHHHHTSSCHHHHHHHHHHHH
T ss_pred EEEChHHhCCCCHHHHHHHHHHHH
Confidence 999988888777766555454443
No 429
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=67.26 E-value=35 Score=30.45 Aligned_cols=77 Identities=16% Similarity=0.055 Sum_probs=42.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCc-----------CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHH
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG-----------QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAI 143 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~-----------~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai 143 (359)
.+..+...+..+-.++.|+|-|= -|||=. .--|.+. .++++.+++.++++++|-+.=|-.+.++++
T Consensus 124 ~Lt~eei~~a~~ia~eaGADfVK--TSTGf~~~~~~~~~~~~~gAt~~d-v~lm~~~i~~~g~~v~vKaaGGirt~~~al 200 (226)
T 1vcv_A 124 YLRDEERYTLYDIIAEAGAHFIK--SSTGFAEEAYAARQGNPVHSTPER-AAAIARYIKEKGYRLGVKMAGGIRTREQAK 200 (226)
T ss_dssp GCCHHHHHHHHHHHHHHTCSEEE--CCCSCCCHHHHHHTTCCSSCCHHH-HHHHHHHHHHHTCCCEEEEESSCCSHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEE--eCCCCCccccccccCCCCCCCHHH-HHHHHHHHHHhCCCceEEEeCCCCCHHHHH
Confidence 34455666666666677777433 244432 2333333 344445555566666765533434567777
Q ss_pred HHHHHHHhCCCC
Q 018253 144 HATEQGFAVGMH 155 (359)
Q Consensus 144 ~la~~a~~~Gad 155 (359)
++.+.+ ++|++
T Consensus 201 ~~i~a~-~~Ga~ 211 (226)
T 1vcv_A 201 AIVDAI-GWGED 211 (226)
T ss_dssp HHHHHH-CSCSC
T ss_pred HHHHHH-HCCCC
Confidence 777776 47776
No 430
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=67.10 E-value=12 Score=33.53 Aligned_cols=100 Identities=12% Similarity=0.009 Sum_probs=59.2
Q ss_pred CCCCHHHHHHH-------HHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHH
Q 018253 74 GRFDLEAYDDL-------VNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHAT 146 (359)
Q Consensus 74 g~ID~~~l~~l-------i~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la 146 (359)
+.+..+.+.++ ++.|.+.|++.|.++++|+=+.. -.+--+++.+...+.. .+|++- +...+ .
T Consensus 41 ~~~t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~-G~~~~~~~~~~l~~~~--~iPv~~-----~~~A~---~ 109 (240)
T 3ixl_A 41 GSVTPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYR-GAAFNAALTVAMREAT--GLPCTT-----MSTAV---L 109 (240)
T ss_dssp CCSSHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTT-CHHHHHHHHHHHHHHH--SSCEEE-----HHHHH---H
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhc-ccchHHHHHHHHHhcc--CCCEEC-----HHHHH---H
Confidence 45666766666 56777899999999988876543 3343344555555543 488873 12222 3
Q ss_pred HHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHh-c-CCeEEEe
Q 018253 147 EQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLS-M-GPTIIYN 189 (359)
Q Consensus 147 ~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~-a-~PiiiYn 189 (359)
+.+++.|+..+-++.||. .++-++|++-.+ . ..++...
T Consensus 110 ~al~~~g~~rvglltpy~-----~~~~~~~~~~l~~~Giev~~~~ 149 (240)
T 3ixl_A 110 NGLRALGVRRVALATAYI-----DDVNERLAAFLAEESLVPTGCR 149 (240)
T ss_dssp HHHHHTTCSEEEEEESSC-----HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHhCCCEEEEEeCCh-----HHHHHHHHHHHHHCCCEEeccc
Confidence 334457999999988843 334444444333 3 4554443
No 431
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=67.09 E-value=77 Score=29.01 Aligned_cols=176 Identities=14% Similarity=0.094 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccCcCCCC-HHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHh-C-CC
Q 018253 79 EAYDDLVNMQIVNGAEGMIVGGTTGEGQLMS-WDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFA-V-GM 154 (359)
Q Consensus 79 ~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT-~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~-~-Ga 154 (359)
.+..-+.+-+.++|.+=+.+.=--= .++ ......+++..- ..++.++-++ |..+.+|++..+|.|.+ + |-
T Consensus 30 ~~~~~~~~a~~asg~e~vtva~rR~---~~~~~~~~~~~~~~i~---~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~ 103 (265)
T 1wv2_A 30 KDLDETRRAIEASGAEIVTVAVRRT---NIGQNPDEPNLLDVIP---PDRYTILPNTAGCYDAVEAVRTCRLARELLDGH 103 (265)
T ss_dssp SSHHHHHHHHHHSCCSEEEEEGGGC---CC-------------C---TTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSC
T ss_pred CCHHHHHHHHHHhCCCeEEEEEEee---ccccCCCcchHHhhhh---hcCCEECCcCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 3344445555689988776654221 221 122234444331 2378899886 56688999999999999 5 66
Q ss_pred CEEE---EcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHhcC-CCeEEEecc----Cc----h
Q 018253 155 HAAL---HINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMAQS-PNLAGVKEC----VG----N 221 (359)
Q Consensus 155 dav~---v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La~~-pnivGiK~s----s~----d 221 (359)
+.+= +.-+.|.-++..+.++-.+.+.++ ..++.|-.+ ++.+-++|.+. +.++ +=.. ++ |
T Consensus 104 ~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~d-------d~~~akrl~~~G~~aV-mPlg~pIGsG~Gi~~ 175 (265)
T 1wv2_A 104 NLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSD-------DPIIARQLAEIGCIAV-MPLAGLIGSGLGICN 175 (265)
T ss_dssp CEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECS-------CHHHHHHHHHSCCSEE-EECSSSTTCCCCCSC
T ss_pred CeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCC-------CHHHHHHHHHhCCCEE-EeCCccCCCCCCcCC
Confidence 7663 334567678889999999999887 466667654 36778888763 4554 3211 12 2
Q ss_pred hhH-hhhh-CCceEEEec--C--CchhhhhhhhcCCceeeccccccc---HHHHHHH
Q 018253 222 DRV-EHYT-GNGIVVWSG--N--DDQCHDARWNHGATGVISVTSNLV---PGMMREL 269 (359)
Q Consensus 222 ~~l-~~~~-~~~~~v~~G--~--d~~~~~~~l~~Ga~G~is~~an~~---P~l~~~l 269 (359)
..+ .... ..++.|+.+ - .+... .++.+|++|++.+++-.- |..+.+-
T Consensus 176 ~~lI~~I~e~~~vPVI~eGGI~TPsDAa-~AmeLGAdgVlVgSAI~~a~dP~~ma~a 231 (265)
T 1wv2_A 176 PYNLRIILEEAKVPVLVDAGVGTASDAA-IAMELGCEAVLMNTAIAHAKDPVMMAEA 231 (265)
T ss_dssp HHHHHHHHHHCSSCBEEESCCCSHHHHH-HHHHHTCSEEEESHHHHTSSSHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEeCCCCCHHHHH-HHHHcCCCEEEEChHHhCCCCHHHHHHH
Confidence 211 1111 234444442 1 12333 358899999998887665 6655543
No 432
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=67.05 E-value=12 Score=30.46 Aligned_cols=88 Identities=10% Similarity=-0.007 Sum_probs=49.8
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC-CCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS-NSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~-~st~~ai~la~~a~~~Gadav~v~ 160 (359)
+.+++...+.+++-+.+..+.+. +.++-.++++...+.-..+++|++|=.. ...++--+..+.++++|+|++.-
T Consensus 44 e~~v~~a~~~~~d~v~lS~~~~~----~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~- 118 (137)
T 1ccw_A 44 ELFIKAAIETKADAILVSSLYGQ----GEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYA- 118 (137)
T ss_dssp HHHHHHHHHHTCSEEEEEECSST----HHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECC-
T ss_pred HHHHHHHHhcCCCEEEEEecCcC----cHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEEC-
Confidence 45666666778888877777653 3445566666665542225787775211 11222223355677889987532
Q ss_pred CCCCCCCCHHHHHHHHHH
Q 018253 161 NPYYGKTSLEGLISHFDS 178 (359)
Q Consensus 161 pP~y~~~s~~~l~~yf~~ 178 (359)
...+..++.+++..
T Consensus 119 ----~g~~~~~~~~~l~~ 132 (137)
T 1ccw_A 119 ----PGTPPEVGIADLKK 132 (137)
T ss_dssp ----TTCCHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHH
Confidence 12345666666544
No 433
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=66.81 E-value=39 Score=32.92 Aligned_cols=75 Identities=15% Similarity=0.099 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCC--C-HHHHHHHHHHHHhCCC
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSN--S-TREAIHATEQGFAVGM 154 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~--s-t~~ai~la~~a~~~Ga 154 (359)
.+.+.++++..++.|+.|+-...+..-....+.+|-.++++.+.+ . ..++.+++-.. . .+..-+..+.+.+.|+
T Consensus 166 l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~-~--g~~v~~H~~~~~~~~~~a~~e~i~la~~~g~ 242 (480)
T 3gip_A 166 QQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAE-R--RRLHTSHIRNEADGVEAAVEEVLAIGRGTGC 242 (480)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHH-T--TCEEEEECSCSSTTHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHH-c--CCEEEEEecCccccHHHHHHHHHHHHHHhCC
Confidence 456677777777899999876544333345688888888866554 2 24677766432 1 2222333344445565
Q ss_pred C
Q 018253 155 H 155 (359)
Q Consensus 155 d 155 (359)
.
T Consensus 243 ~ 243 (480)
T 3gip_A 243 A 243 (480)
T ss_dssp E
T ss_pred C
Confidence 3
No 434
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=66.67 E-value=15 Score=35.12 Aligned_cols=59 Identities=10% Similarity=0.058 Sum_probs=38.7
Q ss_pred CcEEEEecCCC-CHHHHHHHHHHHHhCCCCEEEEc------CCCCCC-CCHHHHHHHHHHHHhc--CCeE
Q 018253 127 SVKVIGNTGSN-STREAIHATEQGFAVGMHAALHI------NPYYGK-TSLEGLISHFDSVLSM--GPTI 186 (359)
Q Consensus 127 rvpViagvg~~-st~~ai~la~~a~~~Gadav~v~------pP~y~~-~s~~~l~~yf~~Ia~a--~Pii 186 (359)
+.-||+|.++. |.+.++++++.++++|+|++-.. .||-|+ +..++ ...++++++. +|++
T Consensus 106 ~~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~eg-l~~l~~~~~e~Gl~~~ 174 (350)
T 1vr6_A 106 YFTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKG-LEYLREAADKYGMYVV 174 (350)
T ss_dssp EEEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHH-HHHHHHHHHHHTCEEE
T ss_pred CeEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHH-HHHHHHHHHHcCCcEE
Confidence 45578887755 88999999999999999986442 233232 34444 4555555554 4554
No 435
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=66.64 E-value=27 Score=32.78 Aligned_cols=71 Identities=11% Similarity=0.029 Sum_probs=43.0
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHH----HHHHhhC---CCcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIG----HTVNCFG---ASVKVIGNTGSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~----~~v~~~~---grvpViagvg~~st~~ai~la~~a~~~Ga 154 (359)
.++++.++++|++++.+.-+.|. .||.++..+.+. .+++.+. +.+|++--++... .+.....+.|+
T Consensus 196 ~~~~~~~~~aGad~iqi~D~~~~--~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~c~g~~-----~~l~~l~~~g~ 268 (353)
T 1j93_A 196 AKYIRYQADSGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSG-----GLLERLPLTGV 268 (353)
T ss_dssp HHHHHHHHHTTCSEEEEECGGGG--GSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEECSSCT-----TTGGGGGGGCC
T ss_pred HHHHHHHHHhCCCEEEEeCcccc--cCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEECCChH-----HHHHHHHhcCC
Confidence 34556677899999998877654 789887766532 2233332 2468764343322 23444457888
Q ss_pred CEEEE
Q 018253 155 HAALH 159 (359)
Q Consensus 155 dav~v 159 (359)
|++.+
T Consensus 269 d~~~~ 273 (353)
T 1j93_A 269 DVVSL 273 (353)
T ss_dssp SEEEC
T ss_pred CEEEe
Confidence 86654
No 436
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=66.51 E-value=35 Score=30.50 Aligned_cols=86 Identities=13% Similarity=0.094 Sum_probs=54.6
Q ss_pred EEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHH
Q 018253 95 GMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLIS 174 (359)
Q Consensus 95 Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~ 174 (359)
|+++...+..|+ .+-.+-++.+.+..+ ..+++.....+.+...+..+.+.+.++|++++.+.... .+..
T Consensus 6 gvi~~~~~~~~~----~~~~~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~-----~~~~ 74 (313)
T 3m9w_A 6 GMAIDDLRLERW----QKDRDIFVKKAESLG--AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQ-----VLSN 74 (313)
T ss_dssp EEEESCCSSSTT----HHHHHHHHHHHHHTS--CEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTT-----SCHH
T ss_pred EEEeCCCCChHH----HHHHHHHHHHHHHcC--CEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh-----hhHH
Confidence 566555444433 233334444444443 45555555678888889999999999999999865432 1234
Q ss_pred HHHHHHhc-CCeEEEeCC
Q 018253 175 HFDSVLSM-GPTIIYNVP 191 (359)
Q Consensus 175 yf~~Ia~a-~PiiiYn~P 191 (359)
.++.+.+. .|+++++.+
T Consensus 75 ~~~~~~~~~iPvV~~~~~ 92 (313)
T 3m9w_A 75 VVKEAKQEGIKVLAYDRM 92 (313)
T ss_dssp HHHHHHTTTCEEEEESSC
T ss_pred HHHHHHHCCCeEEEECCc
Confidence 55666665 799999864
No 437
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=66.36 E-value=56 Score=28.37 Aligned_cols=126 Identities=13% Similarity=0.040 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe-----cCCCC-------HHHHHHHHH
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN-----TGSNS-------TREAIHATE 147 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag-----vg~~s-------t~~ai~la~ 147 (359)
.+...++.+.+.|.+ +=+.+. ...+..++ -++.+.+..++.+.+... .++.+ .+...+.++
T Consensus 11 ~l~~~l~~~~~~G~~-vEl~~~---~~~~~~~~---~~~~~~~~~~~~~~~h~~~~~~~l~~~~~~~r~~~~~~~~~~i~ 83 (254)
T 3ayv_A 11 RAEEALPRLQALGLG-AEVYLD---PALLEEDA---LFQSLRRRFSGKLSVHLPFWNLDLLSPDPEVRGLTLRRLLFGLD 83 (254)
T ss_dssp GHHHHHHHHHHHTCE-EEEECC---GGGTTCHH---HHHHHHHHCCSCEEEECCCTTCCTTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-EEEecc---ccccCcHH---HHHHHHHHhCCCeEEecCccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 467778888889999 755322 23344432 234444445333322221 11111 234566777
Q ss_pred HHHhCCCCEEEEcCCCCCCCC-------HHHHHHHHHHHHhc-----CCeEEEeCCCCCCCCCCHHHHHHHh-cC-CCeE
Q 018253 148 QGFAVGMHAALHINPYYGKTS-------LEGLISHFDSVLSM-----GPTIIYNVPSRTGQDIPPRVIHTMA-QS-PNLA 213 (359)
Q Consensus 148 ~a~~~Gadav~v~pP~y~~~s-------~~~l~~yf~~Ia~a-----~PiiiYn~P~~tg~~ls~e~l~~La-~~-pniv 213 (359)
.|+++|+..+.+.+.+..... .+.+.+.++.+++. +.+.+-|.+.. +++.+.+|. +. |++.
T Consensus 84 ~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~-----~~~~~~~l~~~v~~~vg 158 (254)
T 3ayv_A 84 RAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLLLENSHEP-----HPEALRPVLEAHAGELG 158 (254)
T ss_dssp HHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEECSSCS-----SGGGTHHHHHHHTTSSE
T ss_pred HHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEEEcCCCCC-----CHHHHHHHHHhcCcCEE
Confidence 889999999888766553321 24456666776652 46777776532 555555554 22 6654
Q ss_pred EEec
Q 018253 214 GVKE 217 (359)
Q Consensus 214 GiK~ 217 (359)
-.=|
T Consensus 159 ~~~D 162 (254)
T 3ayv_A 159 FCFD 162 (254)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 3333
No 438
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=66.34 E-value=20 Score=32.88 Aligned_cols=58 Identities=21% Similarity=0.269 Sum_probs=42.8
Q ss_pred ecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC------------------CCHHHHHHHHHHHHhc--CCeEE--EeC
Q 018253 133 NTGSNSTREAIHATEQGFAVGMHAALHINPYYGK------------------TSLEGLISHFDSVLSM--GPTII--YNV 190 (359)
Q Consensus 133 gvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~------------------~s~~~l~~yf~~Ia~a--~Piii--Yn~ 190 (359)
-.|..+.+.+++.++..++. +|++.+-.||--+ .+.+.+.+..++|.+. .|+++ |.+
T Consensus 23 ~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n 101 (271)
T 1ujp_A 23 TAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLN 101 (271)
T ss_dssp ETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHH
T ss_pred cCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCc
Confidence 46888999999999999999 9999999998632 2334445556666554 69988 655
Q ss_pred C
Q 018253 191 P 191 (359)
Q Consensus 191 P 191 (359)
|
T Consensus 102 ~ 102 (271)
T 1ujp_A 102 P 102 (271)
T ss_dssp H
T ss_pred H
Confidence 5
No 439
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=66.34 E-value=30 Score=33.68 Aligned_cols=125 Identities=10% Similarity=0.043 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
.+.+.+.+.+....+.|.+++=+-... +.++-.+.++.+.+.++.++++.+-+ ++.+.++++++++..++.|.
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g~------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 270 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVGA------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDI 270 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCS------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCC------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 477889999999999999998764321 35666788888888888889998865 46689999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCeEEEeccC
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 219 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a---~PiiiYn~P~~tg~~ls~e~l~~La--~~pnivGiK~ss 219 (359)
+.+ --|.. ..+ .+.++.|.+. .||+.=. .-.+++.+.++. ..-+++-+|-+-
T Consensus 271 ~~i--EqP~~-~~d----~~~~~~l~~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 327 (441)
T 2hxt_A 271 AWI--EEPTS-PDD----VLGHAAIRQGITPVPVSTGE------HTQNRVVFKQLLQAGAVDLIQIDAAR 327 (441)
T ss_dssp SCE--ECCSC-TTC----HHHHHHHHHHHTTSCEEECT------TCCSHHHHHHHHHHTCCSEECCCTTT
T ss_pred Cee--eCCCC-HHH----HHHHHHHHhhCCCCCEEEeC------CcCCHHHHHHHHHcCCCCEEEeCcce
Confidence 743 34432 112 3344555543 5666532 245678888886 357888899654
No 440
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=66.10 E-value=14 Score=33.80 Aligned_cols=127 Identities=9% Similarity=0.096 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEe----------cCCCCHHHHHHHH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGN----------TGSNSTREAIHAT 146 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViag----------vg~~st~~ai~la 146 (359)
|.+...++++.+++.+++|+++.++..... ........++|++.- |+..+.+.....+
T Consensus 103 ~~~~~~~~~~~l~~~~vdGiIi~~~~~~~~------------~~~~l~~~~iPvV~~~~~~~~~~~~V~~D~~~~~~~a~ 170 (339)
T 3h5o_A 103 DAGQELQLLRAYLQHRPDGVLITGLSHAEP------------FERILSQHALPVVYMMDLADDGRCCVGFSQEDAGAAIT 170 (339)
T ss_dssp CHHHHHHHHHHHHTTCCSEEEEECSCCCTT------------HHHHHHHTTCCEEEEESCCSSSCCEEECCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHcCCCCEEEEeCCCCCHH------------HHHHHhcCCCCEEEEeecCCCCCeEEEECHHHHHHHHH
Q ss_pred HHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-C--CeEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEE
Q 018253 147 EQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-G--PTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGV 215 (359)
Q Consensus 147 ~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~--PiiiYn~P~~tg~~ls~e~l~~La-~~pnivGi 215 (359)
++..+.|-.-+.++.+.....+.+-...|.+.+.+. . +-..+-.+......-..+.+.++. +.|.+.+|
T Consensus 171 ~~L~~~G~~~I~~i~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ai 243 (339)
T 3h5o_A 171 RHLLSRGKRRIGFLGAQLDERVMKRLDGYRAALDAADCRDAGLEWLDPQPSSMQMGADMLDRALAERPDCDAL 243 (339)
T ss_dssp HHHHHTTCCSEEEEEESCCHHHHHHHHHHHHHHHHTTCCCGGGEEEECSCCCHHHHHHHHHHHHHHCTTCCEE
T ss_pred HHHHHCCCCeEEEEeCCCCccHHHHHHHHHHHHHHCCCCCCChheEecCCCCHHHHHHHHHHHHcCCCCCcEE
No 441
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=66.06 E-value=15 Score=34.86 Aligned_cols=84 Identities=8% Similarity=0.115 Sum_probs=51.3
Q ss_pred HHHHHHHHhhCCCcEEE-EecCCCC-HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCC
Q 018253 115 MLIGHTVNCFGASVKVI-GNTGSNS-TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPS 192 (359)
Q Consensus 115 ~li~~~v~~~~grvpVi-agvg~~s-t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~ 192 (359)
++++.+.+. .++||+ ++.|+-. .+++.++. +.|+|++++..-.+...+++...+-|.+..+. ||
T Consensus 230 ell~~i~~~--~~IPVV~VAeGGI~Tpeda~~~l----~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~-----~~--- 295 (330)
T 2yzr_A 230 EVLLEVKKL--GRLPVVNFAAGGVATPADAALMM----QLGSDGVFVGSGIFKSENPLERARAIVEATYN-----YD--- 295 (330)
T ss_dssp HHHHHHHHH--TSCSSEEEECSCCCSHHHHHHHH----HTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT-----TT---
T ss_pred HHHHHHHHh--CCCCeEEEEECCCCCHHHHHHHH----HcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHh-----cC---
Confidence 444444443 478987 6888875 55544433 36999999998777667777666666655542 33
Q ss_pred CCCCCCCHHHHHHHhc-C-CCeEEEecc
Q 018253 193 RTGQDIPPRVIHTMAQ-S-PNLAGVKEC 218 (359)
Q Consensus 193 ~tg~~ls~e~l~~La~-~-pnivGiK~s 218 (359)
.|+.+.++++ + .-.+|+-.+
T Consensus 296 ------~~~~~~~~s~~~~~~m~g~~~~ 317 (330)
T 2yzr_A 296 ------KPDIVAEVSKNLGEAMKGIDIT 317 (330)
T ss_dssp ------CHHHHHHHHTTCCCCCCC----
T ss_pred ------CHHHHHHHHhcccccCcCcccc
Confidence 3577888874 4 346666543
No 442
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=66.00 E-value=57 Score=31.00 Aligned_cols=151 Identities=7% Similarity=-0.015 Sum_probs=97.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCc------CC------CCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHH
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG------QL------MSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTRE 141 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~------~~------LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ 141 (359)
..+.+.+.+.+....+.|.+++=+-...|+. +. -..++=.+.++.+++.++.++++.+-+ ++.+.++
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~ 214 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDE 214 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHH
Confidence 3578889889999999999988765442221 00 123444577888888888889998865 4568999
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEec
Q 018253 142 AIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKE 217 (359)
Q Consensus 142 ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ 217 (359)
++++++..++.|.+. +--|.- ..+ .+.+++|.+. .||+.=. .-.+++.++++.+ .-+++-+|-
T Consensus 215 a~~~~~~l~~~~i~~--iE~P~~-~~~----~~~~~~l~~~~~ipIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~ 281 (392)
T 2poz_A 215 TIRFCRKIGELDICF--VEEPCD-PFD----NGALKVISEQIPLPIAVGE------RVYTRFGFRKIFELQACGIIQPDI 281 (392)
T ss_dssp HHHHHHHHGGGCEEE--EECCSC-TTC----HHHHHHHHHHCSSCEEECT------TCCHHHHHHHHHTTTCCSEECCCT
T ss_pred HHHHHHHHHhcCCCE--EECCCC-ccc----HHHHHHHHhhCCCCEEecC------CcCCHHHHHHHHHcCCCCEEecCc
Confidence 999999999988764 444532 112 4556666665 5766432 2345788888874 468888986
Q ss_pred cC--chh---hHhhhh-CCceEEEecC
Q 018253 218 CV--GND---RVEHYT-GNGIVVWSGN 238 (359)
Q Consensus 218 ss--~d~---~l~~~~-~~~~~v~~G~ 238 (359)
+- +-. ++.++. .-++.++.+.
T Consensus 282 ~~~GGit~~~~i~~~A~~~g~~~~~h~ 308 (392)
T 2poz_A 282 GTAGGLMETKKICAMAEAYNMRVAPHV 308 (392)
T ss_dssp TTSSCHHHHHHHHHHHHTTTCEECCCC
T ss_pred cccCCHHHHHHHHHHHHHcCCeEecCC
Confidence 53 222 333332 3455555543
No 443
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=65.85 E-value=25 Score=32.56 Aligned_cols=79 Identities=10% Similarity=0.106 Sum_probs=37.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~G 153 (359)
..++.+.+.++++.+.+.|+..|.+.| ||-..-. +-.++++.+.+. .+...+-+.+.+....+ .++..+++|
T Consensus 48 ~~ls~e~i~~~i~~~~~~g~~~i~~tG--GEPll~~--~l~~li~~~~~~-~~~~~i~i~TNG~ll~~---~~~~L~~~g 119 (340)
T 1tv8_A 48 ELLTFDEMARIAKVYAELGVKKIRITG--GEPLMRR--DLDVLIAKLNQI-DGIEDIGLTTNGLLLKK---HGQKLYDAG 119 (340)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEES--SCGGGST--THHHHHHHHTTC-TTCCEEEEEECSTTHHH---HHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEeC--CCccchh--hHHHHHHHHHhC-CCCCeEEEEeCccchHH---HHHHHHHCC
Confidence 346666666777666666666666655 6643321 223344333221 11113333333333332 344444556
Q ss_pred CCEEEEc
Q 018253 154 MHAALHI 160 (359)
Q Consensus 154 adav~v~ 160 (359)
.+.+.+.
T Consensus 120 ~~~v~iS 126 (340)
T 1tv8_A 120 LRRINVS 126 (340)
T ss_dssp CCEEEEE
T ss_pred CCEEEEe
Confidence 6655554
No 444
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=65.66 E-value=82 Score=28.86 Aligned_cols=107 Identities=12% Similarity=0.039 Sum_probs=68.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCc-------cC--------cCCCCHHHHHHHHHHHHHhhCCCcE--EEEecCCCCH
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTT-------GE--------GQLMSWDEHIMLIGHTVNCFGASVK--VIGNTGSNST 139 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~Gst-------GE--------~~~LT~~Er~~li~~~v~~~~grvp--Viagvg~~st 139 (359)
|+++....+++|++.|..-|.+.+.. |. ....+..+|.+-++.+.+..+-... .+...+..+.
T Consensus 173 ~~~~~~~a~~~L~~~G~r~I~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~ 252 (366)
T 3h5t_A 173 NRKAIAPAAQALIDAGHRKIGILSIRLDRANNDGEVTRERLENAQYQVQRDRVRGAMEVFIEAGIDPGTVPIMECWINNR 252 (366)
T ss_dssp HHHHTHHHHHHHHHTTCCSEEEEEECCSSSCCCEECCHHHHHTCCCTTHHHHHHHHHHHHHHHTCCGGGSCEEEESSCCH
T ss_pred hHHHHHHHHHHHHHCCCCcEEEEecccccccccCccccccccccccchHHHHHHHHHHHHHHCCCCCCcceEEEcCCCCH
Confidence 46778889999999998877666522 32 2367889999999888887653321 2333455677
Q ss_pred HHHHHHHHHHHhC--CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CC----eEEEeC
Q 018253 140 REAIHATEQGFAV--GMHAALHINPYYGKTSLEGLISHFDSVLSM---GP----TIIYNV 190 (359)
Q Consensus 140 ~~ai~la~~a~~~--Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a---~P----iiiYn~ 190 (359)
+...+.++...+. ..||++.. +..-...-++.+.+. .| |+=||.
T Consensus 253 ~~~~~~~~~ll~~~~~~~ai~~~-------nD~~A~g~~~al~~~G~~vP~disvigfD~ 305 (366)
T 3h5t_A 253 QHNFEVAKELLETHPDLTAVLCT-------VDALAFGVLEYLKSVGKSAPADLSLTGFDG 305 (366)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEES-------SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCCcEEEEC-------CcHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 7777777776554 47888775 443333334444443 34 677774
No 445
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=65.49 E-value=41 Score=32.57 Aligned_cols=130 Identities=8% Similarity=-0.007 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcC-CCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQ-LMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~-~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
|.+.+.+.++..++.|.+++=+-...|-.. .-..++=.+.++.+++.++.++++++=+ ++.+.++++++++..++.|.
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i 258 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEP 258 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 788999999999999999987754333100 0023455677888889998899999865 46789999999999999998
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 219 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss 219 (359)
+.+= -|.- ..+ .+.+++|.+. .||..=. .-.+++.+.++.+ .-.++-+|-+-
T Consensus 259 ~~iE--eP~~-~~d----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~li~~~a~D~v~ik~~~ 314 (412)
T 3stp_A 259 RWLE--EPVI-ADD----VAGYAELNAMNIVPISGGE------HEFSVIGCAELINRKAVSVLQYDTNR 314 (412)
T ss_dssp SEEE--CCSC-TTC----HHHHHHHHHTCSSCEEECT------TCCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred CEEE--CCCC-ccc----HHHHHHHHhCCCCCEEeCC------CCCCHHHHHHHHHcCCCCEEecChhh
Confidence 7653 3432 112 4456777775 5766532 2356888888874 45788888643
No 446
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=65.30 E-value=33 Score=30.68 Aligned_cols=76 Identities=9% Similarity=0.047 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE------------ecCCCCHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG------------NTGSNSTREAI 143 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia------------gvg~~st~~ai 143 (359)
-|.+...+.++.+++.+++||++.+...+.. . ..++.+ ...++||+. .|+..+.+-..
T Consensus 42 ~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~----~---~~~~~~---~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~ 111 (313)
T 3m9w_A 42 GNEETQMSQIENMINRGVDVLVIIPYNGQVL----S---NVVKEA---KQEGIKVLAYDRMINDADIDFYISFDNEKVGE 111 (313)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECSSTTSC----H---HHHHHH---HTTTCEEEEESSCCTTSCCSEEEEECHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCChhhh----H---HHHHHH---HHCCCeEEEECCcCCCCCceEEEecCHHHHHH
Confidence 4677888999999999999999988765421 1 223322 233577654 22223455577
Q ss_pred HHHHHHH-hCCCCEEEEcC
Q 018253 144 HATEQGF-AVGMHAALHIN 161 (359)
Q Consensus 144 ~la~~a~-~~Gadav~v~p 161 (359)
..+++.. +.|-..+.++.
T Consensus 112 ~a~~~L~~~~G~~~i~~i~ 130 (313)
T 3m9w_A 112 LQAKALVDIVPQGNYFLMG 130 (313)
T ss_dssp HHHHHHHHHCSSEEEEEEE
T ss_pred HHHHHHHHhCCCCcEEEEE
Confidence 7788887 88887777664
No 447
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=65.21 E-value=25 Score=32.69 Aligned_cols=117 Identities=11% Similarity=0.079 Sum_probs=68.6
Q ss_pred CCCCcccccccc-CCcccccCCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHH
Q 018253 40 HLPMRSFEVKNR-TSAEDIKALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIG 118 (359)
Q Consensus 40 ~~~~~~~~~~~~-~~~~~~~~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~ 118 (359)
.+|+-++-+++. .+.+ +.+ .+|. +..+...+.++...-.+.|.+=+++-++. + ... .++++
T Consensus 157 ~ip~gYL~v~~g~k~V~---fv~-----~~~~---~~~e~A~~~aYa~~gad~G~~lV~LD~~~-~--~v~----~e~V~ 218 (286)
T 3vk5_A 157 LLLTVALTFGEDPRTGD---LLG-----TVPV---STASTEEIDRYLHVARAFGFHMVYLYSRN-E--HVP----PEVVR 218 (286)
T ss_dssp EEEEEEEECSCCHHHHH---HHC-----BCCC---CCSSSHHHHHHHHHHHHTTCSEEEEECSS-S--CCC----HHHHH
T ss_pred cceEEEEEECCCCceee---eeC-----CCCC---CCHHHHHHHHHHHHHHHcCCCEEEEcCCC-C--cCC----HHHHH
Confidence 455556655555 3333 222 3333 33455433444444457899998887644 2 111 25677
Q ss_pred HHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018253 119 HTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM 182 (359)
Q Consensus 119 ~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a 182 (359)
.+.+.+.+.+||++|-|=.+.+++. .+.++|||+|.+-.-.+... +-++.+++++.
T Consensus 219 ~I~~~~~~~iPV~vGGGIrs~Eda~----~ll~aGAD~VVVGSAav~d~----~Pelv~e~a~~ 274 (286)
T 3vk5_A 219 HFRKGLGPDQVLFVSGNVRSGRQVT----EYLDSGADYVGFAGALEQPD----WRSALAEIAGR 274 (286)
T ss_dssp HHHHHSCTTCEEEEESSCCSHHHHH----HHHHTTCSEEEESGGGSSTT----HHHHHHHHHC-
T ss_pred HHHHhcCCCCCEEEEeCCCCHHHHH----HHHHcCCCEEEECchhhcCC----CHHHHHHHHHh
Confidence 7777765479999997755555544 44558999999987766432 33555666544
No 448
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=65.12 E-value=17 Score=34.85 Aligned_cols=10 Identities=10% Similarity=0.391 Sum_probs=4.5
Q ss_pred CHHHHHHHHH
Q 018253 77 DLEAYDDLVN 86 (359)
Q Consensus 77 D~~~l~~li~ 86 (359)
|.+.+.++.+
T Consensus 104 ~~~~l~~la~ 113 (365)
T 3rhg_A 104 DIRKLKQVAE 113 (365)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4444444443
No 449
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=65.07 E-value=42 Score=32.20 Aligned_cols=95 Identities=9% Similarity=0.011 Sum_probs=45.2
Q ss_pred HHHHHHCCCCEEEEccCccCcCC----CCHHHHHHHHHHHHHhh---CCCcEEEEecC---CCCHHHHHHHHHHHHhCCC
Q 018253 85 VNMQIVNGAEGMIVGGTTGEGQL----MSWDEHIMLIGHTVNCF---GASVKVIGNTG---SNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 85 i~~li~~Gv~Gl~v~GstGE~~~----LT~~Er~~li~~~v~~~---~grvpViagvg---~~st~~ai~la~~a~~~Ga 154 (359)
++..+++|++.+-+..++++.+. +|.+|-.+.++.+++.+ ++...|.++.. ..+.+..++.++.+.++ |
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a 158 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-V 158 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-C
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-c
Confidence 56666788888888888877533 46665444444444332 11244444432 22344555555555555 5
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHh
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLS 181 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~ 181 (359)
|.+.+.. .....++.++.+.++.+.+
T Consensus 159 ~~i~l~D-T~G~~~P~~~~~lv~~l~~ 184 (382)
T 2ztj_A 159 DRVGLAD-TVGVATPRQVYALVREVRR 184 (382)
T ss_dssp SEEEEEE-TTSCCCHHHHHHHHHHHHH
T ss_pred CEEEecC-CCCCCCHHHHHHHHHHHHH
Confidence 5444322 2222344444444444443
No 450
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=65.05 E-value=14 Score=34.32 Aligned_cols=132 Identities=15% Similarity=0.237 Sum_probs=75.5
Q ss_pred EEeeecCCCCCCC---CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCH
Q 018253 63 ITAIKTPYLPDGR---FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST 139 (359)
Q Consensus 63 ~~al~TPF~~dg~---ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st 139 (359)
+-.++=|-..|.- .+++.+.+-|+.+.+.|++||++..-|-|+ .+..+-=++|++. ++ ..+|..+=.-..+
T Consensus 92 V~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg-~iD~~~~~~Li~~----a~-~l~vTFHRAFD~~ 165 (287)
T 3iwp_A 92 VFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDG-HIDKELCMSLMAI----CR-PLPVTFHRAFDMV 165 (287)
T ss_dssp EEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-CBCHHHHHHHHHH----HT-TSCEEECGGGGGC
T ss_pred eEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCC-CcCHHHHHHHHHH----cC-CCcEEEECchhcc
Confidence 3455666655543 456777788888899999999877766554 3455544455543 33 3677776431222
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc
Q 018253 140 REAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ 208 (359)
Q Consensus 140 ~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~ 208 (359)
.+..+..+...++|+|.|+..-- +++..+=.+..+++.+. ..|.|- .|-.+.++-+.+|.+
T Consensus 166 ~d~~~Ale~Li~lGvdrILTSG~---~~~a~~Gl~~Lk~Lv~~a~~rI~Im-----aGGGV~~~Ni~~l~~ 228 (287)
T 3iwp_A 166 HDPMAALETLLTLGFERVLTSGC---DSSALEGLPLIKRLIEQAKGRIVVM-----PGGGITDRNLQRILE 228 (287)
T ss_dssp SCHHHHHHHHHHHTCSEEEECTT---SSSTTTTHHHHHHHHHHHTTSSEEE-----ECTTCCTTTHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEECCCC---CCChHHhHHHHHHHHHHhCCCCEEE-----ECCCcCHHHHHHHHH
Confidence 23445555566679999998542 33323333444444442 233322 133466666666653
No 451
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=65.04 E-value=34 Score=33.41 Aligned_cols=113 Identities=14% Similarity=0.161 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHC----CCCEEEEccCccCcCCCCHHHHHHHHHHHHHh--hCCCcEEEEecCCCCHHHHHHHHHHHHh
Q 018253 78 LEAYDDLVNMQIVN----GAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNC--FGASVKVIGNTGSNSTREAIHATEQGFA 151 (359)
Q Consensus 78 ~~~l~~li~~li~~----Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~--~~grvpViagvg~~st~~ai~la~~a~~ 151 (359)
.+.+.+.++.+.+. ++..+++.| |+...|+.++-.++++.+.+. ..+.+.+-+.+...+. .-+..+..++
T Consensus 86 ~~~l~~Ei~~~~~~~~~~~i~~i~fgG--Gtpt~l~~~~l~~ll~~i~~~~~~~~~~eitie~~p~~l--~~e~l~~L~~ 161 (457)
T 1olt_A 86 LDALEQEIVHRAPLFAGRHVSQLHWGG--GTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREI--ELDVLDHLRA 161 (457)
T ss_dssp HHHHHHHHHHHGGGGTTCCEEEEEEEE--SCGGGSCHHHHHHHHHHHHHHSCEEEEEEEEEEECSSSC--CTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeC--CCcccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEccCcC--CHHHHHHHHH
Q ss_pred CCCCEEEEcCCCCC---------CCCHHHHHHHHHHHHhc-CC-e---EEEeCCCCC
Q 018253 152 VGMHAALHINPYYG---------KTSLEGLISHFDSVLSM-GP-T---IIYNVPSRT 194 (359)
Q Consensus 152 ~Gadav~v~pP~y~---------~~s~~~l~~yf~~Ia~a-~P-i---iiYn~P~~t 194 (359)
+|++.+.+-.-.+. ..+.+++.+-++.+.+. .+ + +||..|.-|
T Consensus 162 ~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget 218 (457)
T 1olt_A 162 EGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218 (457)
T ss_dssp TTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCC
T ss_pred cCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCC
No 452
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=65.04 E-value=32 Score=32.19 Aligned_cols=68 Identities=10% Similarity=0.167 Sum_probs=42.7
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhC--CCcEEEEec---CCCCH------------HHHHH
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG--ASVKVIGNT---GSNST------------REAIH 144 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~--grvpViagv---g~~st------------~~ai~ 144 (359)
.+.++.+.+.|++.+.+.+..|+ +.++.+++.+. ++-|.+.+| ++.+- +.+++
T Consensus 93 ~~av~~~a~lGaD~vTVHa~~G~----------~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~~ 162 (303)
T 3ru6_A 93 ADACEEVSKLGVDMINIHASAGK----------IAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVIN 162 (303)
T ss_dssp HHHHHHHHTTTCSEEEEEGGGCH----------HHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeccCCH----------HHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHHH
Confidence 34556666789999999998885 23444444432 223444443 33332 23467
Q ss_pred HHHHHHhCCCCEEEE
Q 018253 145 ATEQGFAVGMHAALH 159 (359)
Q Consensus 145 la~~a~~~Gadav~v 159 (359)
+++.+++.|+|+++.
T Consensus 163 lA~~a~~~G~dGvV~ 177 (303)
T 3ru6_A 163 FSKISYENGLDGMVC 177 (303)
T ss_dssp HHHHHHHTTCSEEEC
T ss_pred HHHHHHHcCCCEEEE
Confidence 888888889988766
No 453
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=65.01 E-value=54 Score=28.42 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=37.5
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
..++..++.|++++...++ + ..+++.+.+ . .++++.|+. +..| ++.|.+.|+|.+-+.
T Consensus 74 d~~~~A~~~GAd~v~~~~~-------d----~~v~~~~~~-~--g~~~i~G~~--t~~e----~~~A~~~Gad~v~~f 131 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPGL-------L----EEVAALAQA-R--GVPYLPGVL--TPTE----VERALALGLSALKFF 131 (207)
T ss_dssp HHHHHHHHHTCSEEEESSC-------C----HHHHHHHHH-H--TCCEEEEEC--SHHH----HHHHHHTTCCEEEET
T ss_pred HHHHHHHHcCCCEEEcCCC-------C----HHHHHHHHH-h--CCCEEecCC--CHHH----HHHHHHCCCCEEEEe
Confidence 5677778899999874432 1 134444443 2 367888864 3444 456677899999883
No 454
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=64.94 E-value=19 Score=33.44 Aligned_cols=105 Identities=11% Similarity=0.052 Sum_probs=69.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhC--------C--CcEEEEecCC--CCHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG--------A--SVKVIGNTGS--NSTREAI 143 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~--------g--rvpViagvg~--~st~~ai 143 (359)
--.+.+++.++++.+.||.-+.+..-+.|.+.=+.+|...|.+...+... . |+.+|..... .++.+++
T Consensus 83 ~G~~~l~~iv~~c~~lGI~~LTlYaFStENwkRp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvrviG~~~~lp~~~~~~i 162 (284)
T 2vg3_A 83 MGEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINEL 162 (284)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEEETTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEESCCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEeCChhhCCHHHHHHH
Confidence 34588999999999999999999999999999999998888766544321 2 3334432322 1344455
Q ss_pred HHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018253 144 HATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM 182 (359)
Q Consensus 144 ~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a 182 (359)
+.++..-+..-...+.+.=-| .+.++|++-.+.+++.
T Consensus 163 ~~ae~~T~~n~~l~Lnia~~Y--gGR~EIv~A~r~la~~ 199 (284)
T 2vg3_A 163 AVAEEMTKSNDVITINYCVNY--GGRTEITEATREIARE 199 (284)
T ss_dssp HHHHHHHTTCCSEEEEEEEEE--CHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCceEEEEEecC--CCHHHHHHHHHHHHHH
Confidence 555544333333344333234 2678999999999874
No 455
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=64.90 E-value=32 Score=30.80 Aligned_cols=120 Identities=12% Similarity=0.126 Sum_probs=79.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhC--------C--CcEEEEecCCC--CHH
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFG--------A--SVKVIGNTGSN--STR 140 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~--------g--rvpViagvg~~--st~ 140 (359)
..+-=.+.+++.++++.+.||.-+.+..-+-|.+.=+.+|-..|++...+... . |+.+|.-.... ++.
T Consensus 31 GH~~G~~~~~~i~~~c~~lGI~~lTlYaFStENw~Rp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~~~~ 110 (225)
T 3ugs_B 31 GYSQGVKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVR 110 (225)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCEEEEEEEESGGGGSCHHHHHHHHHHHHHHHHHHHHHSTTTTEEEEEESCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEEEEcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEEEeChHhCCHHHH
Confidence 33455688999999999999999999999999999999999888777665431 2 33344323222 344
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCCCCCCCCCCHHHHHHH
Q 018253 141 EAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVPSRTGQDIPPRVIHTM 206 (359)
Q Consensus 141 ~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P~~tg~~ls~e~l~~L 206 (359)
+.++.++..-+-.-...+.+.=-| .+.++|.+-.+.+++.. -+|+.+++.+-
T Consensus 111 ~~i~~ae~~T~~n~~~~lnia~~Y--ggR~EI~~A~~~iv~~g------------~~I~e~~i~~~ 162 (225)
T 3ugs_B 111 EKITLVEEKTKHCDALCVNLAISY--GARDEIIRAAKRVIEKK------------LELNEENLTQN 162 (225)
T ss_dssp HHHHHHHHHHTTCCSEEEEEEEEE--CHHHHHHHHHHHHHHTT------------CCCSHHHHHHT
T ss_pred HHHHHHHHHhcCCCCcEEEEeeCC--CCHHHHHHHHHHHHHhc------------CcCCHHHHHHh
Confidence 455555544333333344433334 36789999999986543 46888887764
No 456
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=64.88 E-value=25 Score=33.85 Aligned_cols=100 Identities=15% Similarity=0.087 Sum_probs=74.1
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCC
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~G 153 (359)
.+.|.+-+.++++.+.+. ++-|.++-|.|= +++.+-.++++.+.+.++..+|+=++. +++..-++..+-.|.++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~~~~i~~H~-Hnd~GlAvAN~laAv~aG 214 (382)
T 2ztj_A 140 FRSEEQDLLAVYEAVAPY-VDRVGLADTVGV---ATPRQVYALVREVRRVVGPRVDIEFHG-HNDTGCAIANAYEAIEAG 214 (382)
T ss_dssp TTSCHHHHHHHHHHHGGG-CSEEEEEETTSC---CCHHHHHHHHHHHHHHHTTTSEEEEEE-BCTTSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHh-cCEEEecCCCCC---CCHHHHHHHHHHHHHhcCCCCeEEEEe-CCCccHHHHHHHHHHHhC
Confidence 367888999999999999 999998888885 779998999988888653456765554 567777888888889999
Q ss_pred CCEEEEcCCCCC----CCCHHHHHHHHHH
Q 018253 154 MHAALHINPYYG----KTSLEGLISHFDS 178 (359)
Q Consensus 154 adav~v~pP~y~----~~s~~~l~~yf~~ 178 (359)
|+.+=..---+. ..+-++++..+..
T Consensus 215 a~~vd~tv~GlGeraGN~~lE~vv~~L~~ 243 (382)
T 2ztj_A 215 ATHVDTTILGIGERNGITPLGGFLARMYT 243 (382)
T ss_dssp CCEEEEBGGGCSSTTCBCBHHHHHHHHHH
T ss_pred CCEEEEccccccccccchhHHHHHHHHHh
Confidence 998866533222 2455666655443
No 457
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=64.88 E-value=43 Score=31.05 Aligned_cols=77 Identities=12% Similarity=0.189 Sum_probs=41.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccCc-CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG-QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 152 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~-~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~ 152 (359)
+.++.+.+.+..+-..+.|+|-|= -|||=. .--|.+ -.++++.+++..+++++|.+.=|-.+.++++++.+ +
T Consensus 183 ~~Lt~eei~~A~~ia~eaGADfVK--TSTGf~~~GAT~e-dv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~----a 255 (288)
T 3oa3_A 183 SQLTADEIIAGCVLSSLAGADYVK--TSTGFNGPGASIE-NVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVR----A 255 (288)
T ss_dssp GGCCHHHHHHHHHHHHHTTCSEEE--CCCSSSSCCCCHH-HHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHH----T
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEE--cCCCCCCCCCCHH-HHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH----c
Confidence 345566666666666677777432 234421 223333 34555555554456677665323334566665554 6
Q ss_pred CCCEE
Q 018253 153 GMHAA 157 (359)
Q Consensus 153 Gadav 157 (359)
||+.+
T Consensus 256 GA~Ri 260 (288)
T 3oa3_A 256 GAERL 260 (288)
T ss_dssp TCSEE
T ss_pred CCcee
Confidence 76644
No 458
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=64.85 E-value=99 Score=29.50 Aligned_cols=123 Identities=8% Similarity=-0.069 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHCCCCEEEE--ccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecC-CC-CHHHHHHHHHHHHhCCCC
Q 018253 80 AYDDLVNMQIVNGAEGMIV--GGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG-SN-STREAIHATEQGFAVGMH 155 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v--~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg-~~-st~~ai~la~~a~~~Gad 155 (359)
.+.+.++.+++.|...+=+ .|.. ..+.++=.+.++.+++.++.++++++-.. +. +.++++++++..++.|.+
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~----~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~ 235 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA----DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDLELY 235 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC----CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGGCCS
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC----ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcCCe
Confidence 6667888889999998876 2321 13577778889999999988999998764 45 789999999999999987
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC
Q 018253 156 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 219 (359)
Q Consensus 156 av~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss 219 (359)
.+ --|.. ..+ .+.+++|.+. .||+.=. .-.+++.+.++.+ .-.++-+|-+-
T Consensus 236 ~i--EeP~~-~~d----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~l~~~~~d~v~~k~~~ 290 (394)
T 3mkc_A 236 FA--EATLQ-HDD----LSGHAKLVENTRSRICGAE------MSTTRFEAEEWITKGKVHLLQSDYNR 290 (394)
T ss_dssp EE--ESCSC-TTC----HHHHHHHHHHCSSCBEECT------TCCHHHHHHHHHHTTCCSEECCCTTT
T ss_pred EE--ECCCC-chh----HHHHHHHHhhCCCCEEeCC------CCCCHHHHHHHHHcCCCCeEecCccc
Confidence 55 34432 112 3455677765 5765432 2345778888874 46788899765
No 459
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=64.51 E-value=89 Score=32.71 Aligned_cols=96 Identities=11% Similarity=-0.023 Sum_probs=61.0
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecC---------CCCHHHHHHHHHHHHh
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG---------SNSTREAIHATEQGFA 151 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg---------~~st~~ai~la~~a~~ 151 (359)
.++.++...++|++-+-++.+..+ .+.-...++.+.+ .+..+...+..+ ..+.+..+++++.+.+
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~s~n~-----l~~l~~~i~~ak~-~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~ 272 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFDSLNY-----LPNMLLGMEAAGS-AGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVR 272 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSCC-----HHHHHHHHHHHHT-TTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhcCcCEEEEEecHHH-----HHHHHHHHHHHHH-cCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHH
Confidence 467788888999999888876543 2222222333222 222232222222 1267889999999999
Q ss_pred CCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcC
Q 018253 152 VGMHAALHINPYYGKTSLEGLISHFDSVLSMG 183 (359)
Q Consensus 152 ~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~ 183 (359)
+|||.+.+.- .....++.++.+.++.+.+..
T Consensus 273 ~Ga~~I~l~D-T~G~~~P~~v~~lV~~lk~~~ 303 (718)
T 3bg3_A 273 AGTHILCIKD-MAGLLKPTACTMLVSSLRDRF 303 (718)
T ss_dssp HTCSEEEEEC-TTSCCCHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEcC-cCCCcCHHHHHHHHHHHHHhC
Confidence 9999776653 344567888888888887764
No 460
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=64.46 E-value=25 Score=32.78 Aligned_cols=119 Identities=9% Similarity=0.003 Sum_probs=83.0
Q ss_pred ceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccCccCcCC---CCHHHHHHHHHHHHHhhCC-CcEEEEecCC
Q 018253 61 RLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQL---MSWDEHIMLIGHTVNCFGA-SVKVIGNTGS 136 (359)
Q Consensus 61 Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~---LT~~Er~~li~~~v~~~~g-rvpViagvg~ 136 (359)
++-.+.++=| +.|.-..+.-..-++..++.|++-|=+.=.-|..-. =..++-.+-++.+++.+++ -++||.-++.
T Consensus 83 ~v~V~tVigF-P~G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~ 161 (297)
T 4eiv_A 83 GIKVCAAVNF-PEGTGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGE 161 (297)
T ss_dssp GSEEEEEEST-TTCCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSC
T ss_pred CCeEEEEecC-CCCCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEeccc
Confidence 4556666778 688888898888899999999988755555554322 1233344445566666654 4889999998
Q ss_pred CCHHHH-HHHHHHHHhCCCCEEEEcCCCCC-CCCHHHHHHHHHHHH
Q 018253 137 NSTREA-IHATEQGFAVGMHAALHINPYYG-KTSLEGLISHFDSVL 180 (359)
Q Consensus 137 ~st~~a-i~la~~a~~~Gadav~v~pP~y~-~~s~~~l~~yf~~Ia 180 (359)
.+.++. .+.++.|.++|||.|=-..=+-. ..+.+.+.---+.+.
T Consensus 162 Lt~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~ 207 (297)
T 4eiv_A 162 LQGGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALR 207 (297)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHH
Confidence 888884 68889999999999888776643 356666555555443
No 461
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=64.24 E-value=17 Score=31.53 Aligned_cols=102 Identities=12% Similarity=0.127 Sum_probs=57.2
Q ss_pred ceEEeeecCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEE-EecCCCC
Q 018253 61 RLITAIKTPYLPDGR-FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVI-GNTGSNS 138 (359)
Q Consensus 61 Gi~~al~TPF~~dg~-ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVi-agvg~~s 138 (359)
|+..-.-||...-.+ + .+.+...+....+.|.+|+.+..++ .++ .+.+ .+..+.+..++ .|++...
T Consensus 101 gv~vl~~t~~~~~~~~~-~~~v~~~~~~a~~~G~~G~~~~~~~-------~~~-i~~l---r~~~~~~~~iv~gGI~~~g 168 (208)
T 2czd_A 101 EIIMVVEMSHPGALEFI-NPLTDRFIEVANEIEPFGVIAPGTR-------PER-IGYI---RDRLKEGIKILAPGIGAQG 168 (208)
T ss_dssp EEEEECCCCSGGGGTTT-GGGHHHHHHHHHHHCCSEEECCCSS-------THH-HHHH---HHHSCTTCEEEECCCCSST
T ss_pred CcEEEEecCCcchhhHH-HHHHHHHHHHHHHhCCcEEEECCCC-------hHH-HHHH---HHhCCCCeEEEECCCCCCC
Confidence 655544555321101 1 4455666666778999998765542 222 2222 33334333333 3676542
Q ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHH
Q 018253 139 TREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSV 179 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~I 179 (359)
. + ++.+.++|+|.+.+..+.+...+..+..+-+++.
T Consensus 169 ~-~----~~~~~~aGad~vvvGr~I~~a~dp~~~~~~l~~~ 204 (208)
T 2czd_A 169 G-K----AKDAVKAGADYIIVGRAIYNAPNPREAAKAIYDE 204 (208)
T ss_dssp T-H----HHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHH
T ss_pred C-C----HHHHHHcCCCEEEEChHHhcCCCHHHHHHHHHHH
Confidence 1 1 5555677999999998887766666665555543
No 462
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=63.89 E-value=88 Score=28.56 Aligned_cols=80 Identities=11% Similarity=0.047 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccCcCCCC-HHHHHHHHHHHHHhhCCCcE--EEEecCCCCHHHHHHHHHHHHhC--
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMS-WDEHIMLIGHTVNCFGASVK--VIGNTGSNSTREAIHATEQGFAV-- 152 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT-~~Er~~li~~~v~~~~grvp--Viagvg~~st~~ai~la~~a~~~-- 152 (359)
+++....+++|++.|..-|.+.+.... ..+ ..+|.+-+..+.+..+-... ++...+..+.++..+.++...+.
T Consensus 172 ~~~~~~a~~~L~~~G~r~I~~i~~~~~--~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 249 (355)
T 3e3m_A 172 ERAAYDMTNALLARGFRKIVFLGEKDD--DWTRGAARRAGFKRAMREAGLNPDQEIRLGAPPLSIEDGVAAAELILQEYP 249 (355)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEESSC--TTSHHHHHHHHHHHHHHHTTSCSCCEEEESCSSCCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHCCCCeEEEEccCcc--cChhHHHHHHHHHHHHHHCCcCCCccEEEecCCCCHHHHHHHHHHHHcCCC
Confidence 344555556666666554444332211 112 45555555555554332221 22223334444444444444332
Q ss_pred CCCEEEE
Q 018253 153 GMHAALH 159 (359)
Q Consensus 153 Gadav~v 159 (359)
..|+++.
T Consensus 250 ~~~ai~~ 256 (355)
T 3e3m_A 250 DTDCIFC 256 (355)
T ss_dssp TCCEEEE
T ss_pred CCcEEEE
Confidence 3455444
No 463
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=63.62 E-value=15 Score=36.32 Aligned_cols=118 Identities=14% Similarity=0.107 Sum_probs=69.9
Q ss_pred CCceEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-CccCcC-CCCH-HHHHHHHHHHHHhhC-------CCc
Q 018253 59 ALRLITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TTGEGQ-LMSW-DEHIMLIGHTVNCFG-------ASV 128 (359)
Q Consensus 59 ~~Gi~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-stGE~~-~LT~-~Er~~li~~~v~~~~-------grv 128 (359)
..||+-..+=-|.+.| .|.+...++++.+++.|++-|=++| ||--+. ..+. ||..+++.. ++.+. -++
T Consensus 193 vMGIlNvTPDSFsDgg-~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pv-I~~l~~~~~~~~~~v 270 (442)
T 3mcm_A 193 RMGIVNLSNQSFSDGN-FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEF-LEYFKSQLANLIYKP 270 (442)
T ss_dssp EEEEEECSSCC-CCCS-SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHH-HHHHHHHTTTCSSCC
T ss_pred EEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH-HHHHHhhccccCCCC
Confidence 6777776666687777 9999999999999999999998887 443332 3454 556665433 23221 145
Q ss_pred EEEEecCCCCHHHHHHHHHHHHh--CCCCE-EEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018253 129 KVIGNTGSNSTREAIHATEQGFA--VGMHA-ALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 191 (359)
Q Consensus 129 pViagvg~~st~~ai~la~~a~~--~Gada-v~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P 191 (359)
||-+-+. ..+. +++|.+ +||+- +--+. . ...+ +-+..+++. .|+++-+..
T Consensus 271 pISIDT~--~~~V----aeaAL~~~aGa~i~INDVs---g-~~d~---~m~~v~a~~g~~vVlMh~~ 324 (442)
T 3mcm_A 271 LVSIDTR--KLEV----MQKILAKHHDIIWMINDVE---C-NNIE---QKAQLIAKYNKKYVIIHNL 324 (442)
T ss_dssp EEEEECC--CHHH----HHHHHHHHGGGCCEEEECC---C-TTHH---HHHHHHHHHTCEEEEECC-
T ss_pred eEEEeCC--CHHH----HHHHHhhCCCCCEEEEcCC---C-CCCh---HHHHHHHHhCCeEEEECCC
Confidence 6554443 3333 344444 78874 43332 2 1222 445556665 799887653
No 464
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=63.59 E-value=88 Score=28.48 Aligned_cols=127 Identities=11% Similarity=0.008 Sum_probs=69.4
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCC--CHHHHHHHHHHHHHhhCCCcE---EEE--ecC------CCC-------HHHH
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLM--SWDEHIMLIGHTVNCFGASVK---VIG--NTG------SNS-------TREA 142 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~L--T~~Er~~li~~~v~~~~grvp---Via--gvg------~~s-------t~~a 142 (359)
..++.+.+.|.+||=+.+..+..... +.++..++ +...+..+ +. +.. +.. +.+ .+..
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l-~~~l~~~g--L~~~~i~~~~~~~~~~~l~~~d~~~r~~~~~~~ 111 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNL-RHYLDSEG--LENVKISTNVGATRTFDPSSNYPEQRQEALEYL 111 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHH-HHHHHHTT--CTTCEEEEECCCCSSSCTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHH-HHHHHHCC--CCcceeEEEeccCCCCCCCCCCHHHHHHHHHHH
Confidence 78888889999999887654433211 12334444 33444333 33 443 221 111 2456
Q ss_pred HHHHHHHHhCCCCEEEEcCC---C--C-CCC-------------CH---HHHHHHHHHHHhc-----CCeEEEeCCCC-C
Q 018253 143 IHATEQGFAVGMHAALHINP---Y--Y-GKT-------------SL---EGLISHFDSVLSM-----GPTIIYNVPSR-T 194 (359)
Q Consensus 143 i~la~~a~~~Gadav~v~pP---~--y-~~~-------------s~---~~l~~yf~~Ia~a-----~PiiiYn~P~~-t 194 (359)
.+.++.|+++|++.+ +.|- + + ... ++ +.+.+.++.+++. +.+.+-|.+.. +
T Consensus 112 ~~~i~~A~~lG~~~v-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~ 190 (335)
T 2qw5_A 112 KSRVDITAALGGEIM-MGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVKLAIEPITHWET 190 (335)
T ss_dssp HHHHHHHHHTTCSEE-EECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEECCCCTTTC
T ss_pred HHHHHHHHHcCCCEE-eccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCcccc
Confidence 677888899999988 4321 1 1 111 12 2345556666542 46667776532 2
Q ss_pred CCCCCHHHHHHHhc-C--CCeE
Q 018253 195 GQDIPPRVIHTMAQ-S--PNLA 213 (359)
Q Consensus 195 g~~ls~e~l~~La~-~--pniv 213 (359)
..--+++.+.+|.+ . |++.
T Consensus 191 ~~~~t~~~~~~ll~~v~~~~vg 212 (335)
T 2qw5_A 191 PGPNKLSQLIEFLKGVKSKQVG 212 (335)
T ss_dssp SSCCSHHHHHHHHTTCCCTTEE
T ss_pred cccCCHHHHHHHHHhcCCCCee
Confidence 23346788888873 3 5643
No 465
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=63.55 E-value=76 Score=27.71 Aligned_cols=103 Identities=11% Similarity=-0.047 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcE--EEEecCCCCHHHHHHHHHHHHhC--
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVK--VIGNTGSNSTREAIHATEQGFAV-- 152 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvp--Viagvg~~st~~ai~la~~a~~~-- 152 (359)
++++.+..+++|++.|..-+.+.+... ...+..+|.+-++.+.+..+-... .+. .+..+.+++.+.++...+.
T Consensus 111 ~~~~~~~a~~~L~~~G~~~i~~i~~~~--~~~~~~~R~~gf~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 187 (289)
T 3g85_A 111 NYKMGEKASLLFAKKRYKSAAAILTES--LNDAMDNRNKGFIETCHKNGIKISENHII-AAENSIHGGVDAAKKLMKLKN 187 (289)
T ss_dssp HHHHHHHHHHHHHHTTCCBCEEEECCC--SSHHHHHHHHHHHHHHHHTTCBCCGGGEE-ECCSSHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCc--ccccHHHHHHHHHHHHHHcCCCCChhhee-ccCCCHHHHHHHHHHHHcCCC
Confidence 467788899999999988776665432 344567888888888876643321 122 3456788888888877665
Q ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CC----eEEEe
Q 018253 153 GMHAALHINPYYGKTSLEGLISHFDSVLSM---GP----TIIYN 189 (359)
Q Consensus 153 Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a---~P----iiiYn 189 (359)
..|+++.. +......-++.+.+. .| |+-||
T Consensus 188 ~~~ai~~~-------~d~~a~g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 188 TPKALFCN-------SDSIALGVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp CCSEEEES-------SHHHHHHHHHHHHHTTCCTTTTCEEEEEE
T ss_pred CCcEEEEc-------CCHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 37787765 333333444444443 34 77777
No 466
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=63.55 E-value=12 Score=38.73 Aligned_cols=102 Identities=13% Similarity=0.110 Sum_probs=68.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCc---cCcCCCCH---HHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHH-HHH
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTT---GEGQLMSW---DEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIH-ATE 147 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~Gst---GE~~~LT~---~Er~~li~~~v~~~~grvpViagvg~~st~~ai~-la~ 147 (359)
.++++..+++||+-.+.|.+.+++...= +....++. ..-.+|++.+.+ ..|.++.-..+...++..+ ..+
T Consensus 305 g~n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~---kgV~i~lw~~~~~~~~~~~~~~~ 381 (641)
T 3a24_A 305 GVNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAAS---KNVGIILWAGYHAFERDMENVCR 381 (641)
T ss_dssp SSSHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHH---TTCEEEEEEEHHHHHTSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHh---cCCEEEEEeeCcchHHHHHHHHH
Confidence 4899999999999999999999984421 11111111 112344444433 4588888776555555444 778
Q ss_pred HHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc
Q 018253 148 QGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM 182 (359)
Q Consensus 148 ~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a 182 (359)
..++.|++++=+= |...+..+.++||..++++
T Consensus 382 ~~~~~Gv~gvK~D---f~~~~~Q~~v~~y~~i~~~ 413 (641)
T 3a24_A 382 HYAEMGVKGFKVD---FMDRDDQEMTAFNYRAAEM 413 (641)
T ss_dssp HHHHHTCCEEEEE---CCCCCSHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEC---CCCCCcHHHHHHHHHHHHH
Confidence 8899999999886 4344446788899999874
No 467
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=63.52 E-value=13 Score=36.43 Aligned_cols=46 Identities=9% Similarity=-0.103 Sum_probs=22.3
Q ss_pred HHHCCCCEE--EEccCcc-----CcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018253 88 QIVNGAEGM--IVGGTTG-----EGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGS 136 (359)
Q Consensus 88 li~~Gv~Gl--~v~GstG-----E~~~LT~~Er~~li~~~v~~~~grvpViagvg~ 136 (359)
+.+.|+.++ +...+++ .+..++.++-.++++.+.+. ..+|.+++..
T Consensus 157 l~~~G~~~~K~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e~ 209 (473)
T 3e74_A 157 LDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGEL---GQPVLVHCEN 209 (473)
T ss_dssp HHHHTCSCEEEEC------------CCCCHHHHHHHHHHHHHH---TCCEEEECSC
T ss_pred HHHcCCCEEEEeccccCCcccccccCCCCHHHHHHHHHHHHhc---CCeEEEEecC
Confidence 345566665 2222222 45566777766666665542 3466666553
No 468
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=63.37 E-value=24 Score=30.64 Aligned_cols=71 Identities=8% Similarity=0.066 Sum_probs=46.0
Q ss_pred HHHHHHHHHhhCCCcEEEEec--CCCCHHHHHHHHHHHHhCC-CCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEe
Q 018253 114 IMLIGHTVNCFGASVKVIGNT--GSNSTREAIHATEQGFAVG-MHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYN 189 (359)
Q Consensus 114 ~~li~~~v~~~~grvpViagv--g~~st~~ai~la~~a~~~G-adav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn 189 (359)
.+-++...+..+ ..++... +..+.+...+..+...+.+ +|++++.+... .. ....++.+.+. .|++++|
T Consensus 19 ~~gi~~~~~~~g--~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~-~~----~~~~~~~~~~~~ipvV~~~ 91 (276)
T 3ksm_A 19 YLGAQKAADEAG--VTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSA-ED----LTPSVAQYRARNIPVLVVD 91 (276)
T ss_dssp HHHHHHHHHHHT--CEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSST-TT----THHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHcC--CEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCH-HH----HHHHHHHHHHCCCcEEEEe
Confidence 333444444443 3455444 4568888889999999999 99999986432 12 23445566665 7999998
Q ss_pred CC
Q 018253 190 VP 191 (359)
Q Consensus 190 ~P 191 (359)
.+
T Consensus 92 ~~ 93 (276)
T 3ksm_A 92 SD 93 (276)
T ss_dssp SC
T ss_pred cC
Confidence 64
No 469
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=63.15 E-value=40 Score=30.16 Aligned_cols=96 Identities=14% Similarity=0.150 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-e-----------cCCCCHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N-----------TGSNSTREAI 143 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-g-----------vg~~st~~ai 143 (359)
-|.+...+.++.+++.+++|+++.+...+. . ...++.+.+ .++||+. + |+..+.....
T Consensus 41 ~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~----~---~~~~~~~~~---~~iPvV~~~~~~~~~~~~~~V~~d~~~~g~ 110 (313)
T 2h3h_A 41 EDINAQLQMLESFIAEGVNGIAIAPSDPTA----V---IPTIKKALE---MGIPVVTLDTDSPDSGRYVYIGTDNYQAGY 110 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEECCSSTTT----T---HHHHHHHHH---TTCCEEEESSCCTTSCCSCEEECCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCChHH----H---HHHHHHHHH---CCCeEEEeCCCCCCcceeEEECcCHHHHHH
Confidence 467788889999999999999988765431 1 122333322 2467654 2 1122344556
Q ss_pred HHHHHHHhC--CCCEEEEcCCCCCCCCHHHHHHHHHHHHh
Q 018253 144 HATEQGFAV--GMHAALHINPYYGKTSLEGLISHFDSVLS 181 (359)
Q Consensus 144 ~la~~a~~~--Gadav~v~pP~y~~~s~~~l~~yf~~Ia~ 181 (359)
..+++..+. |..-+.++.......+..+-.+-|++..+
T Consensus 111 ~a~~~L~~~~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~ 150 (313)
T 2h3h_A 111 TAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIK 150 (313)
T ss_dssp HHHHHHHHHHTSCSEEEEEESCSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCEEEEEECCCCCccHHHHHHHHHHHhc
Confidence 677888777 87777665432222223334444444443
No 470
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=63.08 E-value=14 Score=35.40 Aligned_cols=95 Identities=8% Similarity=0.025 Sum_probs=62.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEccCccCc-CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC
Q 018253 74 GRFDLEAYDDLVNMQIVNGAEGMIVGGTTGEG-QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV 152 (359)
Q Consensus 74 g~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~-~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~ 152 (359)
+..+.+....+++.+.+.|++.|-+.+.+-+. .... .++++.+.+.+ ++|||+ +|..+.+ .++.+.+.
T Consensus 245 ~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~i~~~~--~iPvi~-~Ggi~~~----~a~~~l~~ 313 (365)
T 2gou_A 245 DADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTP----VSFKRALREAY--QGVLIY-AGRYNAE----KAEQAIND 313 (365)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHC--CSEEEE-ESSCCHH----HHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCcc----HHHHHHHHHHC--CCcEEE-eCCCCHH----HHHHHHHC
Confidence 45677888999999999999999987754111 1111 24566666666 478875 4555544 44555556
Q ss_pred C-CCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCe
Q 018253 153 G-MHAALHINPYYGKTSLEGLISHFDSVLSMGPT 185 (359)
Q Consensus 153 G-adav~v~pP~y~~~s~~~l~~yf~~Ia~a~Pi 185 (359)
| ||.|++.-+.+..|. +++.+.+..|+
T Consensus 314 g~aD~V~igR~~i~~P~------l~~~~~~g~~l 341 (365)
T 2gou_A 314 GLADMIGFGRPFIANPD------LPERLRHGYPL 341 (365)
T ss_dssp TSCSEEECCHHHHHCTT------HHHHHHHTCCC
T ss_pred CCcceehhcHHHHhCch------HHHHHHcCCCC
Confidence 7 999999988776553 44555554443
No 471
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=63.05 E-value=12 Score=33.75 Aligned_cols=77 Identities=8% Similarity=0.027 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEccCccC----cCCCCHHHHHHHHHHHHHhhCC-CcEEEEecCCCCHHHHHHHHH
Q 018253 73 DGRFDLEAYDDLVNMQIVNGAEGMIVGGTTGE----GQLMSWDEHIMLIGHTVNCFGA-SVKVIGNTGSNSTREAIHATE 147 (359)
Q Consensus 73 dg~ID~~~l~~li~~li~~Gv~Gl~v~GstGE----~~~LT~~Er~~li~~~v~~~~g-rvpViagvg~~st~~ai~la~ 147 (359)
|...+.+.+...++..++.|++.|-+=--..- +.+|+.+|+.++.+.+.+.+.. ++++|++ ...+
T Consensus 37 ~~~~~~~~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liIn----------d~~~ 106 (243)
T 3o63_A 37 DARRERGDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVN----------DRAD 106 (243)
T ss_dssp CCCTTTCCHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEE----------SCHH
T ss_pred CCCcccchHHHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEe----------CHHH
Q ss_pred HHHhCCCCEEEE
Q 018253 148 QGFAVGMHAALH 159 (359)
Q Consensus 148 ~a~~~Gadav~v 159 (359)
.|.++|||+|-+
T Consensus 107 lA~~~gAdGVHL 118 (243)
T 3o63_A 107 IARAAGADVLHL 118 (243)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHhCCCEEEe
No 472
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=62.94 E-value=20 Score=39.67 Aligned_cols=97 Identities=14% Similarity=0.162 Sum_probs=76.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCC
Q 018253 75 RFDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 75 ~ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Ga 154 (359)
.-|.+-+.++++.+.+.|++-|.+.-|+|- ++..+-.++++.+.+.. .+|+=+++ +++..-++..+-.|.++||
T Consensus 688 ~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~---~~P~~~~~lv~~l~~~~--~~~i~~H~-Hnt~G~a~An~laA~~aGa 761 (1150)
T 3hbl_A 688 IYTLEYYVKLAKELEREGFHILAIKDMAGL---LKPKAAYELIGELKSAV--DLPIHLHT-HDTSGNGLLTYKQAIDAGV 761 (1150)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEEETTCC---CCHHHHHHHHHHHHHHC--CSCEEEEE-CBTTSCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCeeeEcCccCC---CCHHHHHHHHHHHHHhc--CCeEEEEe-CCCCcHHHHHHHHHHHhCC
Confidence 478899999999999999999999999995 78999999999998876 57777665 4677778999999999999
Q ss_pred CEEEEcC-CCC---CCCCHHHHHHHHH
Q 018253 155 HAALHIN-PYY---GKTSLEGLISHFD 177 (359)
Q Consensus 155 dav~v~p-P~y---~~~s~~~l~~yf~ 177 (359)
|.+=..- +.- +.++-++++..++
T Consensus 762 ~~vD~ai~GlG~~~gn~~lE~lv~~L~ 788 (1150)
T 3hbl_A 762 DIIDTAVASMSGLTSQPSANSLYYALN 788 (1150)
T ss_dssp SEEEEBCGGGCSBTSCCBHHHHHHHTT
T ss_pred CEEEEeccccCCCCCCccHHHHHHHHH
Confidence 9985554 332 2244466655544
No 473
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=62.91 E-value=58 Score=31.16 Aligned_cols=123 Identities=9% Similarity=-0.042 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHCCCCEEEE--ccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecC-CC-CHHHHHHHHHHHHhCCCC
Q 018253 80 AYDDLVNMQIVNGAEGMIV--GGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTG-SN-STREAIHATEQGFAVGMH 155 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v--~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg-~~-st~~ai~la~~a~~~Gad 155 (359)
.+.+.++.+++.|.+.+=+ .|.. ..+.++=.+.++.+.+.++.++++++-.. +. +.++++++++..++.|.+
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~----~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~ 230 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPND----KVSDKEIVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLY 230 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCT----TSCHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCS
T ss_pred HHHHHHHHHHHcCCCEEEecccCCC----ccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCe
Confidence 6667888889999998876 2321 13567778889999999988999998764 45 789999999999999987
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC
Q 018253 156 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 219 (359)
Q Consensus 156 av~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss 219 (359)
.+= -|.. ..+ .+.+++|.+. .||+.=. .-.+++.+.++.+ .-.++-+|-+-
T Consensus 231 ~iE--eP~~-~~~----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~l~~~~~d~v~~k~~~ 285 (394)
T 3mqt_A 231 FIE--ACLQ-HDD----LIGHQKLAAAINTRLCGAE------MSTTRFEAQEWLEKTGISVVQSDYNR 285 (394)
T ss_dssp EEE--SCSC-TTC----HHHHHHHHHHSSSEEEECT------TCCHHHHHHHHHHHHCCSEECCCTTT
T ss_pred EEE--CCCC-ccc----HHHHHHHHhhCCCCEEeCC------CcCCHHHHHHHHHcCCCCeEecCccc
Confidence 653 4432 112 3456677765 5665432 2345778888763 56788888754
No 474
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=62.66 E-value=30 Score=31.57 Aligned_cols=65 Identities=12% Similarity=0.055 Sum_probs=40.9
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHH----------HHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHh
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEH----------IMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFA 151 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er----------~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~ 151 (359)
.++++.+.+.|++++-+... .+.+.+ .+.++.+.+.+ ++|++++..-.+ .+.++.+.+
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~------v~~~~~~~~G~~~~~~~~~i~~i~~~~--~~Pvi~~~~~~~----~~~~~~~~~ 98 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALER------VPADIRAQGGVARMSDPKIIKEIMAAV--SIPVMAKVRIGH----FVEAMILEA 98 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSS------CHHHHHHTTCCCCCCCHHHHHHHHTTC--SSCEEEEEETTC----HHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEeccc------cchHHHhhcCCccCCCHHHHHHHHHhc--CCCeEEEeccCC----HHHHHHHHH
Confidence 46788888999999977421 111111 23455554443 579887643322 566777888
Q ss_pred CCCCEEE
Q 018253 152 VGMHAAL 158 (359)
Q Consensus 152 ~Gadav~ 158 (359)
+|||++.
T Consensus 99 aGad~v~ 105 (297)
T 2zbt_A 99 IGVDFID 105 (297)
T ss_dssp TTCSEEE
T ss_pred CCCCEEe
Confidence 9999993
No 475
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=62.65 E-value=1.6 Score=39.25 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=0.0
Q ss_pred HHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 83 DLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 83 ~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
.+++.+.+.|++.+++.+.+-++..-.. -.++++.+.+.+ ++|||+.=|-.+.+++.++. +.|+|++++...
T Consensus 160 ~~a~~~~~~G~~~i~~t~~~~~g~~~g~--~~~~~~~i~~~~--~iPvia~GGI~~~~d~~~~~----~~Gad~v~vg~a 231 (247)
T 3tdn_A 160 DWVVEVEKRGAGEILLTSIDRDGTKSGY--DTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAF----LRGADKVSINTA 231 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCEEEEecccCCCCcCCC--CHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHH----HcCCcHhhccHH
Confidence 3556667789999988776544332111 123455555544 68998754443455554443 459999999887
Q ss_pred CCCCCC
Q 018253 163 YYGKTS 168 (359)
Q Consensus 163 ~y~~~s 168 (359)
.|..+.
T Consensus 232 l~~~p~ 237 (247)
T 3tdn_A 232 AVENPS 237 (247)
T ss_dssp ------
T ss_pred HHcCcH
Confidence 775443
No 476
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=62.58 E-value=24 Score=30.85 Aligned_cols=66 Identities=8% Similarity=0.031 Sum_probs=43.5
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCC-CCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEE
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQL-MSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAA 157 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~-LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav 157 (359)
...++..++.|++.+.+....-..+. .+ -.++++.+.+... ..+|++++. +.++ ++.+.+.|+|.+
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~~~~~~---~~~~i~~i~~~~~-~~~v~~~~~--t~~e----a~~a~~~Gad~i 157 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDRHDGLD---IASFIRQVKEKYP-NQLLMADIS--TFDE----GLVAHQAGIDFV 157 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCCTTCCC---HHHHHHHHHHHCT-TCEEEEECS--SHHH----HHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcccccCCCCCcc---HHHHHHHHHHhCC-CCeEEEeCC--CHHH----HHHHHHcCCCEE
Confidence 44577788999999877665432210 12 2467777777663 567877765 3333 778889999988
No 477
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=62.57 E-value=41 Score=30.62 Aligned_cols=68 Identities=12% Similarity=0.048 Sum_probs=41.3
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhh-----CCC-cEEEEec---CCCC--------------
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCF-----GAS-VKVIGNT---GSNS-------------- 138 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~-----~gr-vpViagv---g~~s-------------- 138 (359)
...++.+.+.|++.+.+.+..|. +.++.+++.+ .|+ -|.+.+| ++.+
T Consensus 73 ~~a~~~~~~~gad~vTVh~~~G~----------~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~ 142 (259)
T 3tfx_A 73 YNGAKALAKLGITFTTVHALGGS----------QMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPM 142 (259)
T ss_dssp HHHHHHHHTTTCSEEEEEGGGCH----------HHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCH----------HHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCH
Confidence 44556666789999999999884 2333333332 121 2333333 3332
Q ss_pred HHHHHHHHHHHHhCCCCEEEE
Q 018253 139 TREAIHATEQGFAVGMHAALH 159 (359)
Q Consensus 139 t~~ai~la~~a~~~Gadav~v 159 (359)
.+.++++++.++++|+|+++.
T Consensus 143 ~e~v~~~A~~a~~~G~dGvV~ 163 (259)
T 3tfx_A 143 AEQVLSLAKMAKHSGADGVIC 163 (259)
T ss_dssp HHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHhCCCEEEE
Confidence 134557888888888888876
No 478
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=62.30 E-value=83 Score=27.76 Aligned_cols=80 Identities=15% Similarity=0.179 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhC----
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAV---- 152 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~---- 152 (359)
|+++.+..+++|++.|..-|.+.+... ...+..+|.+-++.+.+..+-...++ .+..+.+++.+.++...+.
T Consensus 115 ~~~~~~~a~~~L~~~G~~~I~~i~~~~--~~~~~~~R~~Gf~~al~~~g~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~ 190 (295)
T 3hcw_A 115 NILASENLTRHVIEQGVDELIFITEKG--NFEVSKDRIQGFETVASQFNLDYQII--ETSNEREVILNYMQNLHTRLKDP 190 (295)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEEEESS--CCHHHHHHHHHHHHHHHHTTCEEEEE--EECSCHHHHHHHHHHHHHHHTCT
T ss_pred cHHHHHHHHHHHHHcCCccEEEEcCCc--cchhHHHHHHHHHHHHHHcCCCeeEE--eccCCHHHHHHHHHHHHhhcccC
Confidence 467778888888888888776665332 23356788888777777654333322 2345666666666655443
Q ss_pred -CCCEEEEc
Q 018253 153 -GMHAALHI 160 (359)
Q Consensus 153 -Gadav~v~ 160 (359)
..++++..
T Consensus 191 ~~~~ai~~~ 199 (295)
T 3hcw_A 191 NIKQAIISL 199 (295)
T ss_dssp TSCEEEEES
T ss_pred CCCcEEEEC
Confidence 46776653
No 479
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=62.29 E-value=55 Score=29.65 Aligned_cols=130 Identities=9% Similarity=0.031 Sum_probs=71.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEE-e----------cCCCCHHHHHH
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIG-N----------TGSNSTREAIH 144 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpVia-g----------vg~~st~~ai~ 144 (359)
-|.+...++++.+++.+++|+++.+... +.++ +.+.+.+ ..+||+. + |+..+......
T Consensus 103 ~~~~~~~~~~~~l~~~~vdgiIi~~~~~-----~~~~---~~~~~~~---~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~ 171 (338)
T 3dbi_A 103 HSAEEERQAIQYLLDLRCDAIMIYPRFL-----SVDE---IDDIIDA---HSQPIMVLNRRLRKNSSHSVWCDHKQTSFN 171 (338)
T ss_dssp TSHHHHHHHHHHHHHTTCSEEEECCSSS-----CHHH---HHHHHHH---CSSCEEEESSCCSSSGGGEECBCHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCCEEEEeCCCC-----ChHH---HHHHHHc---CCCCEEEEcCCCCCCCCCEEEEChHHHHHH
Confidence 4667778899999999999999987543 2222 2222222 2467543 2 33445666778
Q ss_pred HHHHHHhCCCCEEEEcCCCCCCCCHHH-HHHHHHHHHhc-CC---eEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEEecc
Q 018253 145 ATEQGFAVGMHAALHINPYYGKTSLEG-LISHFDSVLSM-GP---TIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVKEC 218 (359)
Q Consensus 145 la~~a~~~Gadav~v~pP~y~~~s~~~-l~~yf~~Ia~a-~P---iiiYn~P~~tg~~ls~e~l~~La-~~pnivGiK~s 218 (359)
.+++..+.|...+.++.......+..+ ...|.+.+.+. .+ ..++.... ...-..+.+.+|. +.|.+.+|=-.
T Consensus 172 a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~~~~~ai~~~ 249 (338)
T 3dbi_A 172 AVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKW--TPASGAEGVEMLLERGAKFSALVAS 249 (338)
T ss_dssp HHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHTTCCCCGGGEECCCS--SHHHHHHHHHHHHHTTCCCSEEEES
T ss_pred HHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHCCCCCCcceEEeCCC--CHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 889999999877766644322222333 34444444444 33 22332110 0011124556665 56776666543
No 480
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=62.07 E-value=29 Score=30.81 Aligned_cols=72 Identities=17% Similarity=0.271 Sum_probs=39.3
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCH-----HHHHHHHHHHHhCCCC
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNST-----REAIHATEQGFAVGMH 155 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st-----~~ai~la~~a~~~Gad 155 (359)
..+.++.+.+.|++.+.+-+..|+ +--...++.+.+ .+.++.|+...++.+. +.+.++++.+++.|.+
T Consensus 80 v~~~~~~~~~~gad~vtvh~~~G~------~~l~~~~~~~~~-~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~ 152 (228)
T 3m47_A 80 NEKICRATFKAGADAIIVHGFPGA------DSVRACLNVAEE-MGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVK 152 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTCH------HHHHHHHHHHHH-HTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCEEEEeccCCH------HHHHHHHHHHHh-cCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCc
Confidence 466777777888888888877774 111222222222 2333333333333321 2345567777777877
Q ss_pred EEEE
Q 018253 156 AALH 159 (359)
Q Consensus 156 av~v 159 (359)
++++
T Consensus 153 GvV~ 156 (228)
T 3m47_A 153 NYVG 156 (228)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7554
No 481
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=62.03 E-value=71 Score=30.45 Aligned_cols=126 Identities=11% Similarity=0.017 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHC-CCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCC
Q 018253 76 FDLEAYDDLVNMQIVN-GAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVG 153 (359)
Q Consensus 76 ID~~~l~~li~~li~~-Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~G 153 (359)
-+.+.+.+.++.+++. |...+=+--.. -+.++=.+.++.+++.++.++++++=+ ++-+.++++++++..++.|
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~-----~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~ 240 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGH-----GDLATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYD 240 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCS-----SCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCC-----CCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhC
Confidence 5788899999999999 98887654321 146677788889999998899999865 4668999999999999999
Q ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh--cCCCeEEEeccC
Q 018253 154 MHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA--QSPNLAGVKECV 219 (359)
Q Consensus 154 adav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La--~~pnivGiK~ss 219 (359)
.+.+ --|.- ..+ .+.+++|.+. .||..=. .-.+++.+.++. ..-.++-+|-+-
T Consensus 241 i~~i--EeP~~-~~d----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~a~d~v~ik~~~ 297 (383)
T 3toy_A 241 LTWI--EEPVP-QEN----LSGHAAVRERSEIPIQAGE------NWWFPRGFAEAIAAGASDFIMPDLMK 297 (383)
T ss_dssp CSEE--ECCSC-TTC----HHHHHHHHHHCSSCEEECT------TCCHHHHHHHHHHHTCCSEECCCTTT
T ss_pred CCEE--ECCCC-cch----HHHHHHHHhhcCCCEEeCC------CcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 8654 33432 112 3445677765 5766532 134577788876 356788888654
No 482
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=61.96 E-value=15 Score=31.81 Aligned_cols=68 Identities=9% Similarity=-0.029 Sum_probs=46.9
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCC-----HHHHHHHHHHHHhCCCC
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNS-----TREAIHATEQGFAVGMH 155 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~s-----t~~ai~la~~a~~~Gad 155 (359)
-.+.++.+.+.|++.+.+-..+|.. .++.+.+.. .+.+...++... .+.....++.+.+.|++
T Consensus 67 ~~~~v~~~~~~Gad~vtvh~~~g~~----------~i~~~~~~~--gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~ 134 (208)
T 2czd_A 67 NRLIARKVFGAGADYVIVHTFVGRD----------SVMAVKELG--EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPF 134 (208)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTCHH----------HHHHHHTTS--EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhcCCCEEEEeccCCHH----------HHHHHHHhC--CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCc
Confidence 3567888889999999998888732 255554433 577777765443 33456678888888988
Q ss_pred EEEEc
Q 018253 156 AALHI 160 (359)
Q Consensus 156 av~v~ 160 (359)
++.+.
T Consensus 135 G~~~~ 139 (208)
T 2czd_A 135 GVIAP 139 (208)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 88555
No 483
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=61.93 E-value=8.7 Score=35.56 Aligned_cols=90 Identities=17% Similarity=0.237 Sum_probs=54.3
Q ss_pred CcEEEEecCCC-CHHHHHHHHHHHHhCCCCEE----EE--------cCCC-CCCCC-HHHHHHHHHHHHhc--CCeE---
Q 018253 127 SVKVIGNTGSN-STREAIHATEQGFAVGMHAA----LH--------INPY-YGKTS-LEGLISHFDSVLSM--GPTI--- 186 (359)
Q Consensus 127 rvpViagvg~~-st~~ai~la~~a~~~Gadav----~v--------~pP~-y~~~s-~~~l~~yf~~Ia~a--~Pii--- 186 (359)
+.-||+|..+. +.+.+++.++.++++|+++. +- ..|| |..+. .++ .+.++++++. +|++
T Consensus 15 ~~~vIAGpc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~~~~g~~l~~g-l~~l~~~~~~~Gl~~~te~ 93 (280)
T 2qkf_A 15 PFVLFGGINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEG-LKIFEKVKAEFGIPVITDV 93 (280)
T ss_dssp CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSCSSSSSCCCSCHHHH-HHHHHHHHHHHCCCEEEEC
T ss_pred ceEEEEecCCCCCHHHHHHHHHHHHHhhhhcceeEEEeeeeecCCCCChHHhhccchHHH-HHHHHHHHHHcCCcEEEec
Confidence 46688886544 78899999999999876543 22 1222 22233 344 4555666554 4543
Q ss_pred --------------EEeCCCCCCCCCCHHHHHHHhcCCCeEEEeccC
Q 018253 187 --------------IYNVPSRTGQDIPPRVIHTMAQSPNLAGVKECV 219 (359)
Q Consensus 187 --------------iYn~P~~tg~~ls~e~l~~La~~pnivGiK~ss 219 (359)
+|-+|++.- -..+++.++++...-|++|-..
T Consensus 94 ~d~~~~~~l~~~~d~~kIga~~~--~n~~ll~~~a~~~kPV~lk~G~ 138 (280)
T 2qkf_A 94 HEPHQCQPVAEVCDVIQLPAFLA--RQTDLVVAMAKTGNVVNIKKPQ 138 (280)
T ss_dssp CSGGGHHHHHHHCSEEEECGGGT--TBHHHHHHHHHTCCEEEEECCT
T ss_pred CCHHHHHHHHhhCCEEEECcccc--cCHHHHHHHHcCCCcEEEECCC
Confidence 345554322 2245777777778888888654
No 484
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=61.69 E-value=8.7 Score=33.83 Aligned_cols=83 Identities=14% Similarity=0.093 Sum_probs=47.7
Q ss_pred HHHHHHCCCCEE--EEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCC
Q 018253 85 VNMQIVNGAEGM--IVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 162 (359)
Q Consensus 85 i~~li~~Gv~Gl--~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP 162 (359)
+....+.|++.+ .+.|.+....... ....++++.+.+. ++||++.=|=.+.+++.+ +.++|||++++...
T Consensus 146 a~~a~~~Gad~i~~~v~g~~~~~~~~~-~~~~~~i~~~~~~---~ipvia~GGI~s~~~~~~----~~~~Gad~v~vGsa 217 (234)
T 1yxy_A 146 GLVAHQAGIDFVGTTLSGYTPYSRQEA-GPDVALIEALCKA---GIAVIAEGKIHSPEEAKK----INDLGVAGIVVGGA 217 (234)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSCCSS-SCCHHHHHHHHHT---TCCEEEESCCCSHHHHHH----HHTTCCSEEEECHH
T ss_pred HHHHHHcCCCEEeeeccccCCCCcCCC-CCCHHHHHHHHhC---CCCEEEECCCCCHHHHHH----HHHCCCCEEEEchH
Confidence 556678999988 5566543221111 1224555555553 689987433333555444 34479999999876
Q ss_pred CCCCCCHHHHHHHHHH
Q 018253 163 YYGKTSLEGLISHFDS 178 (359)
Q Consensus 163 ~y~~~s~~~l~~yf~~ 178 (359)
.|. ++...+.|.+
T Consensus 218 l~~---p~~~~~~l~~ 230 (234)
T 1yxy_A 218 ITR---PKEIAERFIE 230 (234)
T ss_dssp HHC---HHHHHHHHHH
T ss_pred HhC---hHHHHHHHHH
Confidence 554 4444444443
No 485
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=61.59 E-value=70 Score=28.22 Aligned_cols=73 Identities=12% Similarity=0.090 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhhCCCcEEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEe
Q 018253 112 EHIMLIGHTVNCFGASVKVIG-NTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYN 189 (359)
Q Consensus 112 Er~~li~~~v~~~~grvpVia-gvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn 189 (359)
+-.+-++...+..+ ..++. ..+..+.++..+..+.+.+.++|++++.+... +.....++.+.+. .|++++|
T Consensus 21 ~~~~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 21 RCLKGFEDAAQALN--VTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDP-----VELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHHHHHHHHHHT--CEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSST-----TTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHcC--CEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCH-----HHHHHHHHHHHHCCCcEEEEC
Confidence 33444444444443 34554 56677888899999999999999999876432 1233455666665 7999998
Q ss_pred CC
Q 018253 190 VP 191 (359)
Q Consensus 190 ~P 191 (359)
.+
T Consensus 94 ~~ 95 (305)
T 3g1w_A 94 SG 95 (305)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 486
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=61.48 E-value=30 Score=31.55 Aligned_cols=87 Identities=13% Similarity=0.074 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEE-EEecCCC--CHHHHH--HHHHHHHhCCC
Q 018253 80 AYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKV-IGNTGSN--STREAI--HATEQGFAVGM 154 (359)
Q Consensus 80 ~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpV-iagvg~~--st~~ai--~la~~a~~~Ga 154 (359)
...++.+.-.+.|++|+++. .+| .. .+.+..+...-+ .-||+.. +..+.. .-.+.+.++|+
T Consensus 145 ~v~~~A~~a~~~G~dGvV~s----------~~e-~~---~ir~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGa 210 (259)
T 3tfx_A 145 QVLSLAKMAKHSGADGVICS----------PLE-VK---KLHENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGS 210 (259)
T ss_dssp HHHHHHHHHHHTTCCEEECC----------GGG-HH---HHHHHHCSSSEEEECCCCCC-----------CHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCEEEEC----------HHH-HH---HHHhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCC
Confidence 33445555557899998852 223 22 223445544333 3488643 223322 23556778999
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHH
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVL 180 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia 180 (359)
|.+++--|.|...++.+..+-+++-.
T Consensus 211 d~iVvGr~I~~a~dp~~a~~~i~~~~ 236 (259)
T 3tfx_A 211 SAIVVGRPITLASDPKAAYEAIKKEF 236 (259)
T ss_dssp SEEEECHHHHTSSSHHHHHHHHHHHH
T ss_pred CEEEEChHHhCCCCHHHHHHHHHHHH
Confidence 99999999888777765554444433
No 487
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=61.46 E-value=1.2e+02 Score=29.28 Aligned_cols=122 Identities=10% Similarity=0.065 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCCEE
Q 018253 79 EAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGMHAA 157 (359)
Q Consensus 79 ~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Gadav 157 (359)
+.+.+.+....+.|.+++=+-... +.++-.+.++.+.+.++.++++.+-. ++.+.++++++++..++.|.+.+
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~------~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i~~i 260 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGD------AARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWL 260 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCS------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSCE
T ss_pred HHHHHHHHHHHHCCCCEEEECCCC------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 778888888889999988764322 56666788888888888889998865 45689999999999999998843
Q ss_pred EEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC
Q 018253 158 LHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 219 (359)
Q Consensus 158 ~v~pP~y~~~s~~~l~~yf~~Ia~a---~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss 219 (359)
--|.- +. -.+.+++|.+. .||+.=. .-.+++.++++.+ .-+++-+|-+-
T Consensus 261 --EqP~~--~~---d~~~~~~l~~~~~~iPIa~dE------~~~~~~~~~~~i~~~~~d~v~ik~~~ 314 (428)
T 3bjs_A 261 --EEPFA--CN---DFASYREVAKITPLVPIAAGE------NHYTRFEFGQMLDAGAVQVWQPDLSK 314 (428)
T ss_dssp --ECCSC--TT---CHHHHHHHTTTCSSSCEEECT------TCCSHHHHHHHHTTCCEEEECCBTTT
T ss_pred --ECCCC--cc---CHHHHHHHHHhCCCCcEEcCC------CcCCHHHHHHHHHhCCCCEEEeCccc
Confidence 34431 11 25566777664 4554432 2356888888874 45788888653
No 488
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=61.40 E-value=16 Score=32.69 Aligned_cols=119 Identities=6% Similarity=-0.113 Sum_probs=65.5
Q ss_pred HHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEc
Q 018253 81 YDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAALHI 160 (359)
Q Consensus 81 l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav~v~ 160 (359)
.+.+++.+-+.||++.++.+.. . ..-.. ..+++.+ +..++|+--++++--.. +.+..+++.+.|+.++-+.
T Consensus 42 ~~~~l~~m~~~GV~~~v~~~~~-~-~~~~n---~~~~~~~-~~~p~r~~~~~~v~p~~---~~~el~~~~~~g~~Gi~~~ 112 (288)
T 2ffi_A 42 LGDYLGQLRAHGFSHGVLVQPS-F-LGTDN---RYLLSAL-QTVPGQLRGVVMLERDV---EQATLAEMARLGVRGVRLN 112 (288)
T ss_dssp HHHHHHHHHHTSCCEECCBCCG-G-GTTCC---HHHHHHH-HHSTTTBCCBBCCCSSC---CHHHHHHHHTTTCCEEECC
T ss_pred HHHHHHHHHHhCCCeEEEECCc-c-ccccH---HHHHHHH-HHCCCCEEEEEEeCCCC---CHHHHHHHHHCCCeEEEEe
Confidence 3445556668999998877742 1 11112 2244443 33445654445553222 2244444556799999554
Q ss_pred CCCCC---CCCHHHHHHHHHHHHhc-CCeEEEeCCCCCCCCCCHHHHHHHh-cCCCeEEEe
Q 018253 161 NPYYG---KTSLEGLISHFDSVLSM-GPTIIYNVPSRTGQDIPPRVIHTMA-QSPNLAGVK 216 (359)
Q Consensus 161 pP~y~---~~s~~~l~~yf~~Ia~a-~PiiiYn~P~~tg~~ls~e~l~~La-~~pnivGiK 216 (359)
|.+. ..+.+.+...|+.+.+. +||+++--+. .++.+.+++ ++| +..+=
T Consensus 113 -~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~------~~~~~~~~~~~~p-l~~vi 165 (288)
T 2ffi_A 113 -LMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQVA------DIPVLVRALQPYG-LDIVI 165 (288)
T ss_dssp -CSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCTT------THHHHHHHHTTTT-CCEEE
T ss_pred -cccCCCCCcccHHHHHHHHHHHHCCCeEEEeechh------hHHHHHHHHHHCC-CCEEE
Confidence 4442 23445677777777765 7999853221 245566666 688 55443
No 489
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=61.34 E-value=18 Score=33.88 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=72.5
Q ss_pred eEEeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEcc-Cc-----cCc--CCCCHHHHHHHHHHHHHhhCCCcEEEEe
Q 018253 62 LITAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGG-TT-----GEG--QLMSWDEHIMLIGHTVNCFGASVKVIGN 133 (359)
Q Consensus 62 i~~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~G-st-----GE~--~~LT~~Er~~li~~~v~~~~grvpViag 133 (359)
....++|.+| ....++++ +.|++++++.| +. |-- -.+|.+|-..-++.+.+.+ .++||++-
T Consensus 18 ~~i~~~~a~D-------~~sA~l~e---~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~-~~~PviaD 86 (302)
T 3fa4_A 18 SFIVAPGVYD-------GLSARVAL---SAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNIS-PSTPVIAD 86 (302)
T ss_dssp CCEEEEEECS-------HHHHHHHH---TTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTS-TTSCEEEE
T ss_pred CeEEEecCcC-------HHHHHHHH---HcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhc-cCCCEEEE
Confidence 3345567775 23344433 57999999965 22 322 3578888877777665533 37899994
Q ss_pred c--CCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCC----------CCHHHHHHHHHHHHhc
Q 018253 134 T--GSNSTREAIHATEQGFAVGMHAALHINPYYGK----------TSLEGLISHFDSVLSM 182 (359)
Q Consensus 134 v--g~~st~~ai~la~~a~~~Gadav~v~pP~y~~----------~s~~~l~~yf~~Ia~a 182 (359)
. |..+..++.+.++...++|++++-+---...| .+.++..+-.++..++
T Consensus 87 ~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A 147 (302)
T 3fa4_A 87 ADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQA 147 (302)
T ss_dssp CTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHH
Confidence 3 43468888999999999999999886543321 2566777777666543
No 490
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=61.24 E-value=60 Score=28.05 Aligned_cols=106 Identities=8% Similarity=-0.043 Sum_probs=65.3
Q ss_pred EEeeecCCC--CCC--CCCHHHHHHHHHHHHHCCC-CEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec---
Q 018253 63 ITAIKTPYL--PDG--RFDLEAYDDLVNMQIVNGA-EGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT--- 134 (359)
Q Consensus 63 ~~al~TPF~--~dg--~ID~~~l~~li~~li~~Gv-~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv--- 134 (359)
.|.++|--+ +.| +.+.+...++++..++.|+ +-+=+=-+..+-. + .++++||+.-
T Consensus 38 ~PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~~~----------i-------~~~~kvI~S~Hdf 100 (196)
T 2ox1_A 38 KEKILTCRRVSDGGKFEGDERERIEKMKRAFDSLNPDYVDLESDLPDSA----------F-------DFNCRIIESYHNF 100 (196)
T ss_dssp SEEEEECCBGGGTSSBCSCHHHHHHHHHHHHHHHCCSEEEEETTSCGGG----------C-------CCSSEEEEEEEES
T ss_pred CcEEEEEeecccCCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCCCHhH----------H-------hCCCEEEEEecCC
Confidence 344555443 233 4777888888888888877 7665544443321 1 1667888864
Q ss_pred -CCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhcCCeEEEeCC
Q 018253 135 -GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSMGPTIIYNVP 191 (359)
Q Consensus 135 -g~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a~PiiiYn~P 191 (359)
+..+.++.+++.+ ++.| |-+=+... ..+.++..+-++...+..|++.|+.-
T Consensus 101 ~~tp~~~~l~~~~~--~~~g-DivKia~~---a~~~~D~l~ll~~~~~~~p~I~~~MG 152 (196)
T 2ox1_A 101 IRTPDYSELKGIVE--GRRG-DLVKIATM---GKSKRDVETIVRILTNYDDVVAFLMG 152 (196)
T ss_dssp SCCCCHHHHHHHHH--TCCS-SEEEEEEE---CCSHHHHHHHHHHHHHCSSEEEEEES
T ss_pred CCCcCHHHHHHHHH--HHcC-CEEEEEEc---CCCHHHHHHHHHHHhhCCCeEEEEcC
Confidence 3456677666666 7889 87744322 23566666666655544588888863
No 491
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=60.98 E-value=95 Score=27.97 Aligned_cols=114 Identities=14% Similarity=0.083 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHC--CCCEEEEccCccCc--CCCCHHHHHHHHHHHHHhh------------------------CCCc
Q 018253 77 DLEAYDDLVNMQIVN--GAEGMIVGGTTGEG--QLMSWDEHIMLIGHTVNCF------------------------GASV 128 (359)
Q Consensus 77 D~~~l~~li~~li~~--Gv~Gl~v~GstGE~--~~LT~~Er~~li~~~v~~~------------------------~grv 128 (359)
|.+.+...+..+.+. +..-|+.+=+..|+ +.++.+||.++++.+.+.. .+.+
T Consensus 61 ~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~~ 140 (258)
T 4h3d_A 61 NIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKEV 140 (258)
T ss_dssp CHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhCCC
Q ss_pred EEEEec----CCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc---CCeEEEeC
Q 018253 129 KVIGNT----GSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM---GPTIIYNV 190 (359)
Q Consensus 129 pViagv----g~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a---~PiiiYn~ 190 (359)
+||+.- +..+.++..++.+.+++.|||-+=+....-...+--.+.++...+.+. .|++.++.
T Consensus 141 kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~M 209 (258)
T 4h3d_A 141 KVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSM 209 (258)
T ss_dssp EEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEEC
T ss_pred EEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeC
No 492
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=60.95 E-value=11 Score=33.01 Aligned_cols=76 Identities=7% Similarity=-0.057 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccCc-CCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCE
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGEG-QLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHA 156 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE~-~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gada 156 (359)
.+.+.+.++.+.+.|++.+=+.-.-|.| ..++ ...++++...+.. +.|+.+++.-+..+ +.++.+.++|+|+
T Consensus 22 ~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~--~~~~~i~~l~~~~--~~~~~v~l~vnd~~---~~v~~~~~~Gad~ 94 (230)
T 1rpx_A 22 FSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNIT--IGPLVVDSLRPIT--DLPLDVHLMIVEPD---QRVPDFIKAGADI 94 (230)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC--CCHHHHHHHGGGC--CSCEEEEEESSSHH---HHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHCCCCEEEEeeccCCcccccc--cCHHHHHHHHhcc--CCcEEEEEEecCHH---HHHHHHHHcCCCE
Confidence 4577888999999999966543233333 2222 1235555555544 35777777666644 5666677899999
Q ss_pred EEEc
Q 018253 157 ALHI 160 (359)
Q Consensus 157 v~v~ 160 (359)
+.+.
T Consensus 95 v~vh 98 (230)
T 1rpx_A 95 VSVH 98 (230)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9654
No 493
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=60.71 E-value=62 Score=30.61 Aligned_cols=124 Identities=12% Similarity=-0.037 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCCC
Q 018253 77 DLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGMH 155 (359)
Q Consensus 77 D~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Gad 155 (359)
+.+.+.+.++.+++.|.+.+=+--.. ..++=.+.++.+++.++.++++++=. ++.+.++++++++..++.|.+
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~------~~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~ 213 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGG------SKELDVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQ 213 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS------CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCS
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecC------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCC
Confidence 67888888888899999887653221 35777888899999998899999865 466899999999999999876
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC
Q 018253 156 AALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV 219 (359)
Q Consensus 156 av~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss 219 (359)
.+= -|.- .++ .+.+++|.+. .||..=. .-.+++.+.++.+ .-.++-+|-+-
T Consensus 214 ~iE--qP~~----~~~-~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~~~~~~~d~v~~k~~~ 268 (368)
T 3q45_A 214 HCE--EPVS----RNL-YTALPKIRQACRIPIMADE------SCCNSFDAERLIQIQACDSFNLKLSK 268 (368)
T ss_dssp CEE--CCBC----GGG-GGGHHHHHHTCSSCEEEST------TCCSHHHHHHHHHTTCCSEEEECTTT
T ss_pred EEE--CCCC----hhH-HHHHHHHHhhCCCCEEEcC------CcCCHHHHHHHHHcCCCCeEEechhh
Confidence 543 3431 122 3456667765 5766432 2356788888873 56888899654
No 494
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=60.37 E-value=27 Score=32.50 Aligned_cols=113 Identities=12% Similarity=0.131 Sum_probs=74.6
Q ss_pred EeeecCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEccC-cc----Cc--CCCCHHHHHHHHHHHHHhhCCCcEEEEec--
Q 018253 64 TAIKTPYLPDGRFDLEAYDDLVNMQIVNGAEGMIVGGT-TG----EG--QLMSWDEHIMLIGHTVNCFGASVKVIGNT-- 134 (359)
Q Consensus 64 ~al~TPF~~dg~ID~~~l~~li~~li~~Gv~Gl~v~Gs-tG----E~--~~LT~~Er~~li~~~v~~~~grvpViagv-- 134 (359)
..++|.+| ....++++ +.|++.+++.|. .+ -- -.+|.+|...-++.+.+.+ ++||++-.
T Consensus 21 i~~~~a~D-------~~sA~~~~---~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~d~ 88 (295)
T 1s2w_A 21 EFIMEAHN-------GLSARIVQ---EAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS--DVPILLDADT 88 (295)
T ss_dssp EEEEEECS-------HHHHHHHH---HHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTC--SSCEEEECCS
T ss_pred EEEecCCC-------HHHHHHHH---HcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEecCCC
Confidence 34677776 34444554 469999999962 33 11 2467888888888877755 47999843
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEEcCCCC-------C---C--CCHHHHHHHHHHHHhc---CCeEEE
Q 018253 135 GSNSTREAIHATEQGFAVGMHAALHINPYY-------G---K--TSLEGLISHFDSVLSM---GPTIIY 188 (359)
Q Consensus 135 g~~st~~ai~la~~a~~~Gadav~v~pP~y-------~---~--~s~~~l~~yf~~Ia~a---~PiiiY 188 (359)
|-.+..++.+.++...++||++|-+---.+ . + .++++..+-.+++.++ .+++|.
T Consensus 89 Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~ 157 (295)
T 1s2w_A 89 GYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIV 157 (295)
T ss_dssp SCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEE
Confidence 333678999999999999999998754321 1 1 4677777877777765 355554
No 495
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=60.30 E-value=39 Score=38.32 Aligned_cols=90 Identities=12% Similarity=0.173 Sum_probs=55.6
Q ss_pred HHHHHHCCCCEEEEccCccCc----------CCCCHHHHHHHHHHHHHhh-----CCCcEEEEecCCCCHHHHHHHHHHH
Q 018253 85 VNMQIVNGAEGMIVGGTTGEG----------QLMSWDEHIMLIGHTVNCF-----GASVKVIGNTGSNSTREAIHATEQG 149 (359)
Q Consensus 85 i~~li~~Gv~Gl~v~GstGE~----------~~LT~~Er~~li~~~v~~~-----~grvpViagvg~~st~~ai~la~~a 149 (359)
...+.++|+|+|.+-|.-|=. .-++.. ..+..+.+.+ .+++|||+.=|=.+-.+++ .|
T Consensus 1010 A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~---~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVa----kA 1082 (1479)
T 1ea0_A 1010 AAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWE---MGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIV----IA 1082 (1479)
T ss_dssp HHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHH---HHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHH----HH
T ss_pred HHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHH---HHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHH----HH
Confidence 345667999999997663221 113333 3333344432 3589999854444555555 34
Q ss_pred HhCCCCEEEEcCCCCC------------------------------CCCHHHHHHHHHHHHh
Q 018253 150 FAVGMHAALHINPYYG------------------------------KTSLEGLISHFDSVLS 181 (359)
Q Consensus 150 ~~~Gadav~v~pP~y~------------------------------~~s~~~l~~yf~~Ia~ 181 (359)
..+|||+|.+-.++.. ....+.+..|++.+.+
T Consensus 1083 LaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~~~gg~e~V~n~l~~l~~ 1144 (1479)
T 1ea0_A 1083 AMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAE 1144 (1479)
T ss_dssp HHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGSCCCCHHHHHHHHHHHHH
T ss_pred HHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHHhhcCCchHHHHHHHHHHHH
Confidence 5689999998766421 2357888888877654
No 496
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=60.20 E-value=1.2e+02 Score=28.83 Aligned_cols=146 Identities=11% Similarity=0.099 Sum_probs=97.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEec-CCCCHHHHHHHHHHHHhCCC
Q 018253 76 FDLEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNT-GSNSTREAIHATEQGFAVGM 154 (359)
Q Consensus 76 ID~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagv-g~~st~~ai~la~~a~~~Ga 154 (359)
-+.+.+.+.++..++.|...+=+-... ..++=.+.++.+++.++.++++.+-. ++-+.++++++++..++.|.
T Consensus 141 ~~~e~~~~~a~~~~~~Gf~~~KlK~g~------~~~~d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~ 214 (379)
T 3r0u_A 141 GNVAETIQNIQNGVEANFTAIKVKTGA------DFNRDIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSL 214 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSS------CHHHHHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeecCC------CHHHHHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCC
Confidence 467888888888889999987764421 46777788889999888889999865 46689999999999999444
Q ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHhc--CCCeEEEeccC--chh---hHh
Q 018253 155 HAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMAQ--SPNLAGVKECV--GND---RVE 225 (359)
Q Consensus 155 dav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La~--~pnivGiK~ss--~d~---~l~ 225 (359)
+-..+--|.-. .+ .+.+++|.+. .||..=. .-.+...+.++.+ .-.++-+|-+- |=. ++.
T Consensus 215 ~l~~iEeP~~~-~d----~~~~~~l~~~~~iPIa~dE------~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia 283 (379)
T 3r0u_A 215 NVEIIEQPVKY-YD----IKAMAEITKFSNIPVVADE------SVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIK 283 (379)
T ss_dssp CEEEEECCSCT-TC----HHHHHHHHHHCSSCEEEST------TCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHH
T ss_pred CcEEEECCCCc-cc----HHHHHHHHhcCCCCEEeCC------ccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHH
Confidence 44455556431 12 3455667665 5665532 2355777888774 46788888643 222 343
Q ss_pred hhh-CCceEEEecC
Q 018253 226 HYT-GNGIVVWSGN 238 (359)
Q Consensus 226 ~~~-~~~~~v~~G~ 238 (359)
.++ .-++.++.|.
T Consensus 284 ~~A~~~gi~~~~~~ 297 (379)
T 3r0u_A 284 KLADSAGISCMVGC 297 (379)
T ss_dssp HHHHHTTCEEEECC
T ss_pred HHHHHcCCEEEEeC
Confidence 332 2456676664
No 497
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=60.11 E-value=83 Score=28.28 Aligned_cols=72 Identities=7% Similarity=0.004 Sum_probs=46.3
Q ss_pred HHHHHHHHhhCC--CcEEEEecCCCCHHHHHHHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc-CCeEEEeCC
Q 018253 115 MLIGHTVNCFGA--SVKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM-GPTIIYNVP 191 (359)
Q Consensus 115 ~li~~~v~~~~g--rvpViagvg~~st~~ai~la~~a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a-~PiiiYn~P 191 (359)
++++.+.+.+.. ...+++.....+.+...+..+...+.++|++++.+. +.+.+...++.+.+. .|+++++.+
T Consensus 22 ~~~~gi~~~a~~~~g~~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~-----~~~~~~~~~~~~~~~~iPvV~~~~~ 96 (325)
T 2x7x_A 22 KMNDEILREAMFYNGVSVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISAN-----EAAPMTPIVEEAYQKGIPVILVDRK 96 (325)
T ss_dssp HHHHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS-----SHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC-----CHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 344444443321 356666555567777788888888899999998753 233344455666555 799999864
No 498
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=59.95 E-value=36 Score=30.50 Aligned_cols=23 Identities=13% Similarity=-0.055 Sum_probs=18.7
Q ss_pred HHHHHHHHHCCCCEEEEccCccC
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGE 104 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE 104 (359)
.+.++.+.+.|++.+.+.+..|.
T Consensus 76 ~~~~~~~~~~gad~vTvh~~~G~ 98 (239)
T 3tr2_A 76 AGACRAVAELGVWMMNIHISGGR 98 (239)
T ss_dssp HHHHHHHHHTTCSEEEEEGGGCH
T ss_pred HHHHHHHHhCCCCEEEEeccCCH
Confidence 34567778899999999999884
No 499
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=59.88 E-value=38 Score=29.95 Aligned_cols=127 Identities=11% Similarity=0.058 Sum_probs=69.2
Q ss_pred HHHHHHHHHCCCCEEEEccCccCcCC-----------------------CCH----HHHHHHHHHHHHhhCCCcEEEEec
Q 018253 82 DDLVNMQIVNGAEGMIVGGTTGEGQL-----------------------MSW----DEHIMLIGHTVNCFGASVKVIGNT 134 (359)
Q Consensus 82 ~~li~~li~~Gv~Gl~v~GstGE~~~-----------------------LT~----~Er~~li~~~v~~~~grvpViagv 134 (359)
..+++.+-+.||+..++.++.-+... ++. ..-..+++.+ +..+++...++.+
T Consensus 16 ~~~l~~m~~~Gv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~-~~~p~~~~~~g~~ 94 (272)
T 3cjp_A 16 EKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSIKELTNVI-QAYPSRYVGFGNV 94 (272)
T ss_dssp HHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHHHHHHHHH-HHSTTTEEEEECC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccccchhhhhhhhhhcccccccCCchhhHHHHHhhHHHHHHHH-HhCCCeEEEEEEe
Confidence 56777778899999888877543211 111 1223344333 3344554333222
Q ss_pred CCCC-HHHHHHHHHH-HHhCCCCEEEEcCCCCCCCCHHHHHHHHHHHHhc--CCeEEEeCCCCCCCCCCHHHHHHHh-cC
Q 018253 135 GSNS-TREAIHATEQ-GFAVGMHAALHINPYYGKTSLEGLISHFDSVLSM--GPTIIYNVPSRTGQDIPPRVIHTMA-QS 209 (359)
Q Consensus 135 g~~s-t~~ai~la~~-a~~~Gadav~v~pP~y~~~s~~~l~~yf~~Ia~a--~PiiiYn~P~~tg~~ls~e~l~~La-~~ 209 (359)
-... .+++++..++ +.+.|+.++-...... . ..+.+...|+...+. +||+++--.. .+. -+++.+.++. ++
T Consensus 95 p~~~~~~~~~~el~~~~~~~g~~gi~~~g~~~-~-~~~~~~~~~~~a~~~~~lpv~iH~~~~-~~~-~~~~~~~~~l~~~ 170 (272)
T 3cjp_A 95 PVGLSENDTNSYIEENIVNNKLVGIGELTPAS-G-QIKSLKPIFKYSMDSGSLPIWIHAFNP-LVL-QDIKEIAELCKAF 170 (272)
T ss_dssp CTTCCHHHHHHHHHHHTTTTTCSEEEEECCCT-T-CGGGGHHHHHHHHHTTCCCEEECCSTT-CCH-HHHHHHHHHHHHS
T ss_pred CCCCCcHHHHHHHHHHHHhcCceEEEecCCCC-C-ccHHHHHHHHHHHhccCCcEEEeCCCC-Ccc-ccHHHHHHHHHHC
Confidence 2222 2567776666 4567999996654432 2 445677777777774 6998874311 000 1234455555 57
Q ss_pred CCeE
Q 018253 210 PNLA 213 (359)
Q Consensus 210 pniv 213 (359)
|++.
T Consensus 171 p~l~ 174 (272)
T 3cjp_A 171 PKVP 174 (272)
T ss_dssp TTSC
T ss_pred CCce
Confidence 7654
No 500
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=59.74 E-value=87 Score=29.78 Aligned_cols=108 Identities=7% Similarity=-0.048 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEEccCccCcCCCCHHHHHHHHHHHHHhhCCCcEEEEecCCCCHHHHHHHHHHHHhCCCCEE
Q 018253 78 LEAYDDLVNMQIVNGAEGMIVGGTTGEGQLMSWDEHIMLIGHTVNCFGASVKVIGNTGSNSTREAIHATEQGFAVGMHAA 157 (359)
Q Consensus 78 ~~~l~~li~~li~~Gv~Gl~v~GstGE~~~LT~~Er~~li~~~v~~~~grvpViagvg~~st~~ai~la~~a~~~Gadav 157 (359)
.+.+....+..+..|+..++..+.......-+.+.-....+.+.+...-++-..+++.....++..+ ..+.|+.++
T Consensus 76 ~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----l~~~g~~~~ 151 (448)
T 3hm7_A 76 WEGFASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGNIDHLQD----LHDGGVIGF 151 (448)
T ss_dssp GCCSHHHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTCGGGHHH----HHHTTCSEE
T ss_pred HhHHHHHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccCHHHHHH----HHHcCCCEE
Confidence 3456677788899999999988722233334555555555554443322444556665544433333 334788887
Q ss_pred EEcCCCCC-----CCCHHHHHHHHHHHHhc-CCeEEEe
Q 018253 158 LHINPYYG-----KTSLEGLISHFDSVLSM-GPTIIYN 189 (359)
Q Consensus 158 ~v~pP~y~-----~~s~~~l~~yf~~Ia~a-~PiiiYn 189 (359)
-+...|+. ..+.+.+.+.++...+. +|++++.
T Consensus 152 ~~~l~~~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~ 189 (448)
T 3hm7_A 152 KAFMSECGTDDFQFSHDETLLKGMKKIAALGSILAVHA 189 (448)
T ss_dssp EEESSSCSSSSSCCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred EEeeccccCCccCcCCHHHHHHHHHHHHhcCCEEEEEe
Confidence 65544432 23667777777766665 7999885
Done!