Query         018254
Match_columns 359
No_of_seqs    320 out of 1602
Neff          5.5 
Searched_HMMs 29240
Date          Mon Mar 25 12:22:01 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018254.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018254hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3ceg_A Baculoviral IAP repeat- 100.0 2.9E-54   1E-58  420.3  22.7  263   19-299    37-315 (323)
  2 1yh2_A HSPC150 protein similar 100.0 1.5E-41 5.1E-46  303.7  18.7  166   51-229     2-167 (169)
  3 3h8k_A Ubiquitin-conjugating e 100.0 3.8E-41 1.3E-45  299.1  20.2  154   52-212     2-162 (164)
  4 2ucz_A UBC7, ubiquitin conjuga 100.0 2.5E-41 8.4E-46  300.8  18.7  156   50-212     1-163 (165)
  5 1ayz_A UBC2, ubiquitin-conjuga 100.0   4E-41 1.4E-45  301.3  19.3  154   50-217     1-154 (169)
  6 1zdn_A Ubiquitin-conjugating e 100.0 3.6E-41 1.2E-45  298.0  17.1  151   47-211     7-157 (158)
  7 2c2v_B Ubiquitin-conjugating e 100.0 4.2E-41 1.4E-45  296.5  16.6  148   51-212     3-150 (154)
  8 2aak_A UBC1, ubiquitin conjuga 100.0 9.5E-41 3.2E-45  293.3  18.4  149   50-212     1-149 (152)
  9 2ayv_A Ubiquitin-conjugating e 100.0   1E-40 3.5E-45  297.8  18.7  147   51-211    19-165 (166)
 10 2r0j_A Ubiquitin carrier prote 100.0 1.1E-40 3.7E-45  292.3  17.0  145   54-212     2-146 (149)
 11 1z2u_A Ubiquitin-conjugating e 100.0 1.6E-40 5.5E-45  291.3  18.1  147   52-212     3-149 (150)
 12 4gpr_A Ubiquitin-conjugating e 100.0 2.1E-40 7.2E-45  291.0  18.5  147   52-212     3-149 (151)
 13 2c4o_A Ubiquitin-conjugating e 100.0 2.1E-40 7.2E-45  295.4  18.3  151   48-212    14-164 (165)
 14 2e2c_A Ubiquitin conjugating e 100.0 3.3E-40 1.1E-44  291.2  19.0  148   50-212     6-153 (156)
 15 2pwq_A Ubiquitin conjugating e 100.0 9.5E-41 3.2E-45  309.7  15.2  184   50-247    20-205 (216)
 16 3rz3_A Ubiquitin-conjugating e 100.0 4.1E-40 1.4E-44  298.0  18.2  158   52-216     6-176 (183)
 17 1jat_A Ubiquitin-conjugating e 100.0 3.1E-40 1.1E-44  291.1  16.8  146   53-212     5-150 (155)
 18 3rcz_B SUMO-conjugating enzyme 100.0 4.5E-40 1.5E-44  292.9  17.5  150   50-211     7-161 (163)
 19 2bep_A Ubiquitin-conjugating e 100.0 8.9E-40   3E-44  289.3  18.4  151   48-212     3-157 (159)
 20 3fn1_B NEDD8-conjugating enzym 100.0 8.8E-40   3E-44  291.3  18.2  154   50-212    11-166 (167)
 21 2gjd_A Ubiquitin-conjugating e 100.0   1E-39 3.6E-44  288.4  17.0  150   50-211     1-155 (157)
 22 1fxt_A Ubiquitin-conjugating e 100.0 3.9E-40 1.3E-44  288.5  13.8  145   54-212     2-148 (149)
 23 1i7k_A Ubiquitin-conjugating e 100.0 7.9E-40 2.7E-44  295.5  15.8  148   50-212    27-174 (179)
 24 2grr_A Ubiquitin-conjugating e 100.0 1.6E-39 5.6E-44  288.3  17.0  153   48-212     2-159 (161)
 25 2awf_A Ubiquitin-conjugating e 100.0 1.2E-39 4.2E-44  292.3  15.6  149   52-207    16-172 (172)
 26 1yrv_A Ubiquitin-conjugating l 100.0 1.6E-39 5.5E-44  291.0  15.7  151   45-208    15-166 (169)
 27 3bzh_A Ubiquitin-conjugating e 100.0   4E-39 1.4E-43  294.3  18.5  147   52-212    47-193 (194)
 28 3k9o_A Ubiquitin-conjugating e 100.0   3E-39   1E-43  296.0  17.0  150   50-213     2-155 (201)
 29 2f4z_A Tgtwinscan_2721 - E2 do 100.0 4.1E-39 1.4E-43  294.0  17.4  147   52-212    31-191 (193)
 30 1wzv_A Ubiquitin-conjugating e 100.0 1.1E-38 3.9E-43  280.9  16.3  145   54-212     5-150 (155)
 31 3e46_A Ubiquitin-conjugating e 100.0 3.1E-38 1.1E-42  299.0  18.3  153   47-213    51-207 (253)
 32 2y9m_A Ubiquitin-conjugating e 100.0 5.7E-38 1.9E-42  281.4  17.9  151   49-212     2-167 (172)
 33 1tte_A Ubiquitin-conjugating e 100.0 1.4E-38 4.8E-43  294.9  11.6  146   53-212     2-149 (215)
 34 1y8x_A Ubiquitin-conjugating e 100.0 1.6E-37 5.3E-42  275.6  16.1  142   52-210     5-147 (160)
 35 2nvu_C NEDD8-conjugating enzym 100.0 3.1E-37 1.1E-41  278.7  17.3  143   51-210    24-167 (180)
 36 2onu_A Ubiquitin-conjugating e 100.0 4.3E-38 1.5E-42  277.0  10.8  143   54-213     3-147 (152)
 37 1c4z_D UBCH7, ubiquitin conjug 100.0 4.2E-38 1.4E-42  277.1   8.7  146   54-213     3-149 (154)
 38 2z5d_A Ubiquitin-conjugating e 100.0 1.6E-37 5.5E-42  280.5  12.3  149   47-213    17-169 (179)
 39 1yf9_A Ubiquitin carrier prote 100.0 3.3E-37 1.1E-41  276.5  13.1  154   53-224    12-169 (171)
 40 4ddg_A Ubiquitin-conjugating e 100.0 8.1E-36 2.8E-40  298.5  21.1  163   52-233     2-164 (399)
 41 2h2y_A Ubiquitin-conjugating e 100.0 8.2E-36 2.8E-40  258.0  16.9  117   52-177    19-135 (136)
 42 3o2u_A NEDD8-conjugating enzym 100.0 5.7E-36   2E-40  272.5  15.8  143   51-210    27-176 (190)
 43 2fo3_A Ubiquitin-conjugating e 100.0 5.4E-36 1.8E-40  255.4  13.9  116   53-177     6-121 (125)
 44 4ds2_A Ubiquitin-conjugating e 100.0 5.4E-36 1.8E-40  267.1  13.9  146   48-205     3-163 (167)
 45 2a7l_A Hypothetical ubiquitin- 100.0 3.2E-36 1.1E-40  260.9  11.3  118   47-173    17-136 (136)
 46 2q0v_A Ubiquitin-conjugating e 100.0 6.7E-35 2.3E-39  258.0  14.9  135   47-196    15-156 (156)
 47 2f4w_A Ubiquitin-conjugating e 100.0 2.5E-34 8.7E-39  261.1  17.5  119   51-178    12-130 (187)
 48 2a4d_A Ubiquitin-conjugating e 100.0 2.1E-34 7.2E-39  255.9  15.5  127   50-186    22-154 (160)
 49 2hlw_A Ubiquitin-conjugating e 100.0 1.8E-34 6.2E-39  258.6  14.5  148   26-186    11-164 (170)
 50 1zuo_A Hypothetical protein LO 100.0 2.5E-34 8.4E-39  261.0   8.6  150   43-213    17-182 (186)
 51 1jat_B Ubiquitin-conjugating e 100.0 9.2E-34 3.1E-38  245.4  10.7  121   53-186     6-133 (138)
 52 2z6o_A UFM1-conjugating enzyme  99.9 5.4E-24 1.9E-28  189.0   5.2  102   51-166    30-144 (172)
 53 3r3q_A Suppressor protein STP2  99.6   5E-16 1.7E-20  138.0  10.1  115   55-177    30-159 (162)
 54 3kpa_A Probable ubiquitin fold  99.6 5.1E-17 1.7E-21  141.7   3.6   84   52-143    33-127 (168)
 55 3obq_A Tumor susceptibility ge  99.3 3.4E-12 1.1E-16  111.6   9.9  107   59-178    26-142 (146)
 56 2ebm_A RWD domain-containing p  95.2    0.11 3.6E-06   43.0   9.4   68   54-123    11-78  (128)
 57 2day_A Ring finger protein 25;  93.9    0.26 8.7E-06   40.6   8.7   68   57-124    12-83  (128)
 58 2yz0_A Serine/threonine-protei  92.6    0.46 1.6E-05   39.6   8.2   69   54-124    11-86  (138)
 59 2ebk_A RWD domain-containing p  90.9    0.39 1.4E-05   39.5   5.9   66   57-123    11-79  (128)
 60 1ukx_A GCN2, GCN2 EIF2alpha ki  90.6     1.6 5.5E-05   36.0   9.5   70   53-123    10-86  (137)
 61 3zqs_A E3 ubiquitin-protein li  85.2     6.2 0.00021   35.3  10.2   85   56-174     4-88  (186)
 62 2daw_A RWD domain containing p  83.9     3.4 0.00012   35.3   7.8   68   53-124    14-99  (154)
 63 2dax_A Protein C21ORF6; RWD do  78.7     1.1 3.7E-05   38.1   2.7   24  101-124    74-97  (152)
 64 3u3c_B Paxillin LD2 peptide; 4  25.6      39  0.0013   20.3   1.9   20   54-73      6-25  (26)
 65 2bum_A Protocatechuate 3,4-dio  21.0      67  0.0023   28.9   3.5   27   98-124   109-140 (209)

No 1  
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00  E-value=2.9e-54  Score=420.31  Aligned_cols=263  Identities=35%  Similarity=0.652  Sum_probs=225.4

Q ss_pred             cCCCCCceeeCCCCC--------CccccccccCCCCCCCCChhHHHHHHHHHHHHHhcCCC----CeEEEeecCCcceEE
Q 018254           19 TISFPQFDVVSDVSD--------HHYITSSFTKKNGRDHFPAGSHKKIMQEWKILEKHLPE----SIFVRVYENRIDLLR   86 (359)
Q Consensus        19 ~~~~~~f~~v~~~~d--------h~y~~~~~~~~~~~~~~ss~a~kRL~kEl~~L~k~~p~----gI~v~~~e~~l~~w~   86 (359)
                      ..+|.+||++++.+|        |||.+....   ....+++.+.+||++|++.|++++|.    ++++.++++|++.|+
T Consensus        37 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~  113 (323)
T 3ceg_A           37 KLQFDTFEMVSEDEDGKLGFKVNYHYMSQVKN---ANDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMK  113 (323)
T ss_dssp             TTSEEEECCEEECTTSCEEESSCCTTHHHHHT---CCCCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEE
T ss_pred             HhcCceeeecccccccccccccchHHHhhhhc---cCCCCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccE
Confidence            467999999987766        677654211   23456788999999999999999886    567889999999999


Q ss_pred             EEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccc---cccCCCcCCCCceeeccccccCCCCCCCcccCcccHHH
Q 018254           87 AVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFG---LRLNPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQ  163 (359)
Q Consensus        87 ~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i---~rfHPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~q  163 (359)
                      ++|.||+||||+||+|+|+|.||++||++||+|+|.|++   .+||||||.+|+||||+|++|+|.+.+.|+|++|+|.+
T Consensus       114 ~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~  193 (323)
T 3ceg_A          114 VLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQ  193 (323)
T ss_dssp             EEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHH
T ss_pred             EEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHH
Confidence            999999999999999999999999999999999999983   14599999999999999999999888999999878999


Q ss_pred             HHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHH-HHHHHHhCCCCCcHHHHHHHHHHhhHHHHHHH
Q 018254          164 VLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCK-SMTFLLRNPPKNFEGFVRSHFRERGHVILSAC  242 (359)
Q Consensus       164 VL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k-~m~~~l~~pp~~Fe~~V~~hf~~r~~~Il~~~  242 (359)
                      ||++||+||.+++|++++|++....|+.++.++++.|+++|+.++++ +|.++|++||..|+++|..||+.++..|+++|
T Consensus       194 VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~~t~k~A~~~~l~~Pp~~f~~~i~~hF~~~~~~i~~~~  273 (323)
T 3ceg_A          194 VLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRNPSPCFKEVIHKHFYLKRVEIMAQC  273 (323)
T ss_dssp             HHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTTHHHHHSCCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHHHHHHHhhHHHHhCCCcccHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999999999986656789999999999999999976 57889999999999999999999999999999


Q ss_pred             HHHhccCcccceeccCCCCCCCCCCCCCCCCccCChhHHHHHHHHHHHHHHHHHHcC
Q 018254          243 KSYLSGHVRVGYYLNEGSSGGGASSPGPGGAVDVSEKFQGLIVQLYPELVTAFSRTG  299 (359)
Q Consensus       243 ~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~s~~f~~~l~~~~~~l~~~f~~~g  299 (359)
                      ++|+++..+..         .+..      ......++..+|.+++.+|..+|.++-
T Consensus       274 ~~w~~e~~~~~---------~~~~------~~~~~~~~~~~l~~~~~~l~~~l~~~~  315 (323)
T 3ceg_A          274 EEWIADIQQYS---------SDKR------VGRTMSHHAAALKRHTAQLREELLKLP  315 (323)
T ss_dssp             HHHHHHHTTC---------------------CHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHhhhhhc---------cccc------cchhhhhHHHHHHHHHHHHHHHHHhcC
Confidence            99999732110         0110      112344566889999999999998864


No 2  
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00  E-value=1.5e-41  Score=303.71  Aligned_cols=166  Identities=25%  Similarity=0.453  Sum_probs=145.4

Q ss_pred             ChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCC
Q 018254           51 PAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNP  130 (359)
Q Consensus        51 ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHP  130 (359)
                      |..+.+||++|++.|++++|.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+++  ||
T Consensus         2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HP   79 (169)
T 1yh2_A            2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIY--HP   79 (169)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC--BT
T ss_pred             chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCc--cc
Confidence            3568999999999999999999999999999999999999999999999999999999999999999999999976  99


Q ss_pred             CcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHH
Q 018254          131 NLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCK  210 (359)
Q Consensus       131 NVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k  210 (359)
                      |||.+|+||||+|++|.   .+.|+|++ +|.+||++||+||.+|+|  ++|++.  +|+.+|.++++.|+++|+.++.+
T Consensus        80 Nv~~~G~iCl~iL~~~~---~~~W~p~~-~i~~vL~si~~ll~~p~~--~~p~n~--~aa~~~~~~~~~y~~~~r~~~~~  151 (169)
T 1yh2_A           80 NIDSAGRICLDVLKLPP---KGAWRPSL-NIATVLTSIQLLMSEPNP--DDPLMA--DISSEFKYNKPAFLKNARQWTEK  151 (169)
T ss_dssp             TBCTTCBBCCGGGSCTT---TSCCCTTS-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             cCCcCCeEecccccCCc---ccCCCCCC-cHHHHHHHHHHHHhCCCC--cchHhH--HHHHHHHhhHHHHHHHHHHHHHH
Confidence            99999999999998763   37899998 999999999999999999  999998  78999999999999999999988


Q ss_pred             HHHHHHhCCCCCcHHHHHH
Q 018254          211 SMTFLLRNPPKNFEGFVRS  229 (359)
Q Consensus       211 ~m~~~l~~pp~~Fe~~V~~  229 (359)
                      ++.   .++..++++.|+.
T Consensus       152 ~a~---~~~~~~~~~~~~~  167 (169)
T 1yh2_A          152 HAR---QKQKADEEEMLDN  167 (169)
T ss_dssp             HSC---CC-----------
T ss_pred             Hcc---ccccCCHHHHhhc
Confidence            665   3445667766653


No 3  
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00  E-value=3.8e-41  Score=299.07  Aligned_cols=154  Identities=26%  Similarity=0.502  Sum_probs=144.2

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCeEEEeecC-CcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCC
Q 018254           52 AGSHKKIMQEWKILEKHLPESIFVRVYEN-RIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNP  130 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p~gI~v~~~e~-~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHP  130 (359)
                      +.+.+||++|++.|++++|.||++.+.++ |++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+++  ||
T Consensus         2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HP   79 (164)
T 3h8k_A            2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMF--HP   79 (164)
T ss_dssp             CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC--CT
T ss_pred             cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCc--cC
Confidence            46899999999999999999999998766 9999999999999999999999999999999999999999999976  99


Q ss_pred             CcCCCCceeeccccccCC------CCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHH
Q 018254          131 NLYANGRVCLSLLNTWTG------KKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDV  204 (359)
Q Consensus       131 NVy~~GkVCLslL~tw~G------~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v  204 (359)
                      |||.+|+|||++|++|.+      .+++.|+|++ ||.+||++|++||.+|++  ++|++.  +|+.+|.+++.+|+++|
T Consensus        80 NV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~-ti~~vL~~i~~ll~~pn~--~~p~n~--~aa~~~~~~~~~f~~~~  154 (164)
T 3h8k_A           80 NIYPDGRVCISILHAPGDDPMGYESSAERWSPVQ-SVEKILLSVVSMLAEPND--ESGANV--DASKMWRDDREQFYKIA  154 (164)
T ss_dssp             TBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTC-CHHHHHHHHHHHHHSCCC--SSCSSH--HHHHHHHHCHHHHHHHH
T ss_pred             CCCCCCcEeeecccCcccccccccccccCCCCCC-cHHHHHHHHHHHHcCCCC--CCccCH--HHHHHHHHCHHHHHHHH
Confidence            999999999999998743      3468999998 899999999999999999  999998  78999999999999999


Q ss_pred             HHHHHHHH
Q 018254          205 FILSCKSM  212 (359)
Q Consensus       205 ~~~t~k~m  212 (359)
                      +.++.+++
T Consensus       155 ~~~~~~s~  162 (164)
T 3h8k_A          155 KQIVQKSL  162 (164)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhh
Confidence            99998864


No 4  
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00  E-value=2.5e-41  Score=300.76  Aligned_cols=156  Identities=28%  Similarity=0.549  Sum_probs=143.9

Q ss_pred             CChhHHHHHHHHHHHHHhcCCCCeEEEeec-CCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccccccc
Q 018254           50 FPAGSHKKIMQEWKILEKHLPESIFVRVYE-NRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRL  128 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e-~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rf  128 (359)
                      |++.+.+||++|+++|+++++.||++.+.+ +|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+++  
T Consensus         1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~--   78 (165)
T 2ucz_A            1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSIL--   78 (165)
T ss_dssp             -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCS--
T ss_pred             CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCc--
Confidence            456789999999999999999999999864 79999999999999999999999999999999999999999999976  


Q ss_pred             CCCcCCCCceeeccccccCC------CCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHH
Q 018254          129 NPNLYANGRVCLSLLNTWTG------KKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNE  202 (359)
Q Consensus       129 HPNVy~~GkVCLslL~tw~G------~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne  202 (359)
                      |||||.+|+||||+|++|..      .+.+.|+|++ +|.+||++||+||.+|++  ++|+|.  +|+.+|.+++.+|++
T Consensus        79 HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~-~i~~vL~si~~ll~~Pn~--~~p~n~--~aa~~~~~~~~~y~~  153 (165)
T 2ucz_A           79 HPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQ-SVEKILLSVMSMLSEPNI--ESGANI--DACILWRDNRPEFER  153 (165)
T ss_dssp             CTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTC-CHHHHHHHHHHHHHSCCG--GGCCCH--HHHHHHHTTHHHHHH
T ss_pred             cCCCCCCCcEeehhhCCccccccccCCCCCCCCCcC-cHHHHHHHHHHHHhCCCC--CCchhH--HHHHHHHHCHHHHHH
Confidence            99999999999999987632      2368999998 999999999999999998  999998  789999999999999


Q ss_pred             HHHHHHHHHH
Q 018254          203 DVFILSCKSM  212 (359)
Q Consensus       203 ~v~~~t~k~m  212 (359)
                      +|+.++.+++
T Consensus       154 ~v~~~~~~~~  163 (165)
T 2ucz_A          154 QVKLSILKSL  163 (165)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            9999988753


No 5  
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00  E-value=4e-41  Score=301.25  Aligned_cols=154  Identities=29%  Similarity=0.581  Sum_probs=145.1

Q ss_pred             CChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccC
Q 018254           50 FPAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLN  129 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfH  129 (359)
                      |++.+.+||++|++.|++++|.||++.+.++|+..|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+++  |
T Consensus         1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~--H   78 (169)
T 1ayz_A            1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMF--H   78 (169)
T ss_dssp             -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC--C
T ss_pred             CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCc--c
Confidence            45578999999999999999999999999999999999999999999999999999999999999999999999976  9


Q ss_pred             CCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHH
Q 018254          130 PNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSC  209 (359)
Q Consensus       130 PNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~  209 (359)
                      ||||.+|+|||++|.       +.|+|++ +|.+||++|++||.+|+|  ++|+|.  +|+.+|.++++.|+++|+.++.
T Consensus        79 PNI~~~G~ICl~iL~-------~~WsP~~-~i~~vL~si~~ll~~Pn~--~~P~n~--~aa~~~~~d~~~y~~~~r~~~~  146 (169)
T 1ayz_A           79 PNVYANGEICLDILQ-------NRWTPTY-DVASILTSIQSLFNDPNP--ASPANV--EAATLFKDHKSQYVKRVKETVE  146 (169)
T ss_dssp             TTBCTTSBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHTCCCC--SSCSSH--HHHHHHHHCHHHHHHHHHHHHH
T ss_pred             CCCCCCCeEeehhhc-------cCCCCcC-cHHHHHHHHHHHHhCCCC--CcHHHH--HHHHHHHHCHHHHHHHHHHHHH
Confidence            999999999999997       7899999 999999999999999999  999998  7899999999999999999999


Q ss_pred             HHHHHHHh
Q 018254          210 KSMTFLLR  217 (359)
Q Consensus       210 k~m~~~l~  217 (359)
                      +++.....
T Consensus       147 ~~a~~~~~  154 (169)
T 1ayz_A          147 KSWEDDMD  154 (169)
T ss_dssp             HHHHHHTC
T ss_pred             HHcCCCcc
Confidence            88776543


No 6  
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00  E-value=3.6e-41  Score=298.04  Aligned_cols=151  Identities=25%  Similarity=0.459  Sum_probs=143.6

Q ss_pred             CCCCChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccccc
Q 018254           47 RDHFPAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGL  126 (359)
Q Consensus        47 ~~~~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~  126 (359)
                      ...+++.+.+||++|++.|++++|.||++.++++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+++
T Consensus         7 ~~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~   86 (158)
T 1zdn_A            7 VENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIF   86 (158)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred             ccccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcc
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHH
Q 018254          127 RLNPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFI  206 (359)
Q Consensus       127 rfHPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~  206 (359)
                        |||||.+|+|||++|+       +.|+|.+ +|.+||++|++||.+|+|  ++|+|.  +|+.+|.++++.|+++|+.
T Consensus        87 --HPnv~~~G~iCl~iL~-------~~W~p~~-~i~~vL~~i~~ll~~pn~--~~p~n~--~aa~~~~~d~~~f~~~a~~  152 (158)
T 1zdn_A           87 --HPNVGANGEICVNVLK-------RDWTAEL-GIRHVLLTIKCLLIHPNP--ESALNE--EAGRLLLENYEEYAARARL  152 (158)
T ss_dssp             --CTTBCTTSBBCHHHHT-------TTCCTTC-CHHHHHHHHHHHHHSCCG--GGCSSH--HHHHHHHHCHHHHHHHHHH
T ss_pred             --cCCCCCCCEEehhhcC-------CCCCCCC-cHHHHHHHHHHHHhCCCC--CCcccH--HHHHHHHHCHHHHHHHHHH
Confidence              9999999999999997       7899998 999999999999999999  999998  7899999999999999999


Q ss_pred             HHHHH
Q 018254          207 LSCKS  211 (359)
Q Consensus       207 ~t~k~  211 (359)
                      ++.++
T Consensus       153 ~t~~~  157 (158)
T 1zdn_A          153 LTEIH  157 (158)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            98775


No 7  
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00  E-value=4.2e-41  Score=296.48  Aligned_cols=148  Identities=27%  Similarity=0.466  Sum_probs=139.1

Q ss_pred             ChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCC
Q 018254           51 PAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNP  130 (359)
Q Consensus        51 ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHP  130 (359)
                      |..+.+||++|++.|++++|.||++.+.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+++  ||
T Consensus         3 s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HP   80 (154)
T 2c2v_B            3 SAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIY--HP   80 (154)
T ss_dssp             SCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC--CT
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcc--cC
Confidence            3456799999999999999999999999999999999999999999999999999999999999999999999976  99


Q ss_pred             CcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHH
Q 018254          131 NLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCK  210 (359)
Q Consensus       131 NVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k  210 (359)
                      |||.+|+|||++|+       +.|+|++ +|.+||++|++||.+|+|  ++|++.  +|+.+|.+|++.|+++|+.++.+
T Consensus        81 nv~~~G~iCl~iL~-------~~W~p~~-~i~~vl~~i~~ll~~pn~--~~p~n~--~aa~~~~~d~~~f~~~ar~~~~~  148 (154)
T 2c2v_B           81 NVDKLGRICLDILK-------DKWSPAL-QIRTVLLSIQALLSAPNP--DDPLAN--DVAEQWKTNEAQAIETARAWTRL  148 (154)
T ss_dssp             TBCTTCBBCCHHHH-------TSCCTTC-CHHHHHHHHHHHTTSCCC--CCC--C--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCccCCeEEchhcc-------CCCCCCC-cHHHHHHHHHHHHhCCCC--CCcccH--HHHHHHHHCHHHHHHHHHHHHHH
Confidence            99999999999997       7999998 999999999999999999  999998  78999999999999999999987


Q ss_pred             HH
Q 018254          211 SM  212 (359)
Q Consensus       211 ~m  212 (359)
                      ++
T Consensus       149 ~a  150 (154)
T 2c2v_B          149 YA  150 (154)
T ss_dssp             HS
T ss_pred             hc
Confidence            65


No 8  
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00  E-value=9.5e-41  Score=293.33  Aligned_cols=149  Identities=34%  Similarity=0.633  Sum_probs=142.0

Q ss_pred             CChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccC
Q 018254           50 FPAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLN  129 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfH  129 (359)
                      |++.+.+||++|++.|+++++.||++.+.++|+..|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+++  |
T Consensus         1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--H   78 (152)
T 2aak_A            1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMF--H   78 (152)
T ss_dssp             CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC--C
T ss_pred             CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcc--c
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999999976  9


Q ss_pred             CCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHH
Q 018254          130 PNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSC  209 (359)
Q Consensus       130 PNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~  209 (359)
                      ||||.+|+|||++|.       +.|+|++ +|.+||.+|++||.+|++  ++|+|.  +|+.+|.++++.|+++|+.++.
T Consensus        79 Pnv~~~G~iCl~iL~-------~~W~p~~-~i~~vl~~i~~ll~~p~~--~~p~n~--~aa~~~~~~~~~y~~~~~~~~~  146 (152)
T 2aak_A           79 PNIYADGSICLDILQ-------NQWSPIY-DVAAILTSIQSLLCDPNP--NSPANS--EAARMYSESKREYNRRVRDVVE  146 (152)
T ss_dssp             TTBCTTSBBCCGGGT-------TSCCTTC-CHHHHHHHHHHHHTSCCT--TSCSSH--HHHHHHHHCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEechhhc-------CCCCCCC-cHHHHHHHHHHHHhCCCC--CccccH--HHHHHHHHCHHHHHHHHHHHHH
Confidence            999999999999997       7899998 999999999999999999  999998  7899999999999999999988


Q ss_pred             HHH
Q 018254          210 KSM  212 (359)
Q Consensus       210 k~m  212 (359)
                      +++
T Consensus       147 ~~a  149 (152)
T 2aak_A          147 QSW  149 (152)
T ss_dssp             HHC
T ss_pred             HHc
Confidence            764


No 9  
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00  E-value=1e-40  Score=297.83  Aligned_cols=147  Identities=29%  Similarity=0.560  Sum_probs=140.8

Q ss_pred             ChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCC
Q 018254           51 PAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNP  130 (359)
Q Consensus        51 ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHP  130 (359)
                      .+.+.+||++|++.|++++|.||++.+.++|++.|+++|.||+||||+||+|.|+|.||++||++||+|+|.|+++  ||
T Consensus        19 ~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~--HP   96 (166)
T 2ayv_A           19 FQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIY--HP   96 (166)
T ss_dssp             CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC--BT
T ss_pred             CcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCc--CC
Confidence            3568999999999999999999999999999999999999999999999999999999999999999999999986  99


Q ss_pred             CcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHH
Q 018254          131 NLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCK  210 (359)
Q Consensus       131 NVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k  210 (359)
                      |||.+|+|||++|+       +.|+|++ +|.+||++|++||.+|+|  ++|++.  +|+.+|.++++.|+++|+.++.+
T Consensus        97 NI~~~G~ICL~iL~-------~~WsP~~-ti~~vL~sI~sll~~pn~--~~Pln~--~aa~l~~~d~~~f~~~ar~~~~~  164 (166)
T 2ayv_A           97 NINSQGAICLDILK-------DQWSPAL-TISKVLLSISSLLTDPNP--DDPLVP--EIAHLYKSDRMRYDQTAREWSQK  164 (166)
T ss_dssp             TBCTTCBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             cCCCCCeEEccccc-------ccCCCCC-cHHHHHHHHHHHHhCCCC--CchhhH--HHHHHHHHCHHHHHHHHHHHHHH
Confidence            99999999999997       7999998 999999999999999999  999998  78999999999999999999877


Q ss_pred             H
Q 018254          211 S  211 (359)
Q Consensus       211 ~  211 (359)
                      +
T Consensus       165 ~  165 (166)
T 2ayv_A          165 Y  165 (166)
T ss_dssp             H
T ss_pred             h
Confidence            5


No 10 
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00  E-value=1.1e-40  Score=292.26  Aligned_cols=145  Identities=26%  Similarity=0.470  Sum_probs=138.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCCcC
Q 018254           54 SHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPNLY  133 (359)
Q Consensus        54 a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPNVy  133 (359)
                      +.+||++|+++|++++|.||++.+.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+++  |||||
T Consensus         2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HPnv~   79 (149)
T 2r0j_A            2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIY--HPNID   79 (149)
T ss_dssp             CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCC--BTTBC
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCc--cCCCC
Confidence            3589999999999999999999999999999999999999999999999999999999999999999999976  99999


Q ss_pred             CCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHHHH
Q 018254          134 ANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCKSM  212 (359)
Q Consensus       134 ~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k~m  212 (359)
                      .+|+|||++|+       +.|+|++ +|.+||++|++||.+|+|  ++|++.  +++.+|.++++.|+++|+.++++++
T Consensus        80 ~~G~iCl~iL~-------~~W~p~~-~i~~vl~~i~~ll~~p~~--~~p~n~--~aa~~~~~~~~~f~~~~~~~~~~~a  146 (149)
T 2r0j_A           80 KLGRICLDILK-------DKWSPAL-QIRTVLLSIQALLSSPEP--DDPLDS--KVAEHFKQDKNDAEHVARQWNKIYA  146 (149)
T ss_dssp             TTCBBCCGGGT-------TTCCTTS-CHHHHHHHHHHHHHSCCT--TSCSSC--HHHHHHHHCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEechhcC-------CCCCCCC-cHHHHHHHHHHHHhCCCC--CCchhH--HHHHHHHHCHHHHHHHHHHHHHHHc
Confidence            99999999997       8999998 999999999999999999  999998  7899999999999999999998754


No 11 
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00  E-value=1.6e-40  Score=291.29  Aligned_cols=147  Identities=29%  Similarity=0.526  Sum_probs=140.3

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCC
Q 018254           52 AGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPN  131 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPN  131 (359)
                      ..+.+||++|++.|++++|.||++.+.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+++  |||
T Consensus         3 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HPn   80 (150)
T 1z2u_A            3 HMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY--HPN   80 (150)
T ss_dssp             CHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC--BTT
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcc--cCc
Confidence            457899999999999999999999999999999999999999999999999999999999999999999999976  999


Q ss_pred             cCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHHH
Q 018254          132 LYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCKS  211 (359)
Q Consensus       132 Vy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k~  211 (359)
                      ||.+|+|||++|+       +.|+|++ +|.+||++|++||.+|+|  ++|++.  +++.+|.++++.|+++|+.+++++
T Consensus        81 v~~~G~iCl~iL~-------~~W~p~~-~i~~vl~~i~~ll~~pn~--~~p~n~--~aa~~~~~~~~~f~~~~~~~~~~~  148 (150)
T 1z2u_A           81 INSNGSICLDILR-------SQWSPAL-TISKVLLSICSLLCDPNP--DDPLVP--EIARIYKTDRERYNQLAREWTQKY  148 (150)
T ss_dssp             BCTTCBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEeecccc-------CCCCCCC-CHHHHHHHHHHHhhCCCC--CCccCH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997       7999998 999999999999999999  999998  679999999999999999999875


Q ss_pred             H
Q 018254          212 M  212 (359)
Q Consensus       212 m  212 (359)
                      +
T Consensus       149 a  149 (150)
T 1z2u_A          149 A  149 (150)
T ss_dssp             C
T ss_pred             h
Confidence            3


No 12 
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00  E-value=2.1e-40  Score=290.98  Aligned_cols=147  Identities=27%  Similarity=0.511  Sum_probs=141.2

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCC
Q 018254           52 AGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPN  131 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPN  131 (359)
                      +.+.+||++|++.|++++|.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+++  |||
T Consensus         3 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~--HPn   80 (151)
T 4gpr_A            3 AMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVY--HPN   80 (151)
T ss_dssp             HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC--BTT
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcc--cce
Confidence            568999999999999999999999999999999999999999999999999999999999999999999999976  999


Q ss_pred             cCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHHH
Q 018254          132 LYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCKS  211 (359)
Q Consensus       132 Vy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k~  211 (359)
                      |+.+|+|||++|.       +.|+|++ +|.+||++|++||.+|+|  ++|.+.  +++.+|.++++.|+++|+.++.++
T Consensus        81 v~~~G~iCl~iL~-------~~W~p~~-~i~~vl~~i~~ll~~p~~--~~p~n~--~aa~~~~~d~~~f~~~ar~~~~~y  148 (151)
T 4gpr_A           81 INKNGVICLDILK-------DQWSPAL-TLSRVLLSISSLLTDPNP--SDPLDP--EVANVLRANKKQFEDTAREWTRMY  148 (151)
T ss_dssp             BCTTCBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHCCCT--TSCSSH--HHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             ECCCCEEEccccc-------CCCCCCC-cHHHHHHHHHHHhcCCCC--CCchhH--HHHHHHHHCHHHHHHHHHHHHHHh
Confidence            9999999999997       7999998 999999999999999999  999998  789999999999999999999876


Q ss_pred             H
Q 018254          212 M  212 (359)
Q Consensus       212 m  212 (359)
                      +
T Consensus       149 a  149 (151)
T 4gpr_A          149 A  149 (151)
T ss_dssp             C
T ss_pred             c
Confidence            4


No 13 
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00  E-value=2.1e-40  Score=295.43  Aligned_cols=151  Identities=28%  Similarity=0.494  Sum_probs=141.9

Q ss_pred             CCCChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccc
Q 018254           48 DHFPAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLR  127 (359)
Q Consensus        48 ~~~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~r  127 (359)
                      ....+.+.+||++|++.|++++|.||++.+.++|++.|+++|.||+||||+||+|.|+|.||++||++||+|+|.|+++ 
T Consensus        14 ~~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~-   92 (165)
T 2c4o_A           14 VPRGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY-   92 (165)
T ss_dssp             --CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC-
T ss_pred             ccCCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCc-
Confidence            3345678999999999999999999999999999999999999999999999999999999999999999999999976 


Q ss_pred             cCCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHH
Q 018254          128 LNPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFIL  207 (359)
Q Consensus       128 fHPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~  207 (359)
                       |||||.+|+|||++|+       +.|+|++ +|.+||++||+||.+|+|  ++|++.  +|+.+|.+++++|+++|+.+
T Consensus        93 -HPnV~~~G~ICl~iL~-------~~W~P~~-ti~~vL~si~~ll~~pn~--~~P~n~--~aa~~~~~d~~~y~~~ar~~  159 (165)
T 2c4o_A           93 -HPNINSNGSICLDILR-------SQWSPAL-TISKVLLSICSLLCDPNP--DDPLVP--EIARIYKTDREKYNRIAREW  159 (165)
T ss_dssp             -BTTBCTTCBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHSCCT--TSCSSH--HHHHHHHHCHHHHHHHHHHH
T ss_pred             -CCcCCCCCeEeehhhc-------CCCCCcC-cHHHHHHHHHHHHhCCCC--CccccH--HHHHHHHHHHHHHHHHHHHH
Confidence             9999999999999997       7999998 999999999999999999  999998  67999999999999999999


Q ss_pred             HHHHH
Q 018254          208 SCKSM  212 (359)
Q Consensus       208 t~k~m  212 (359)
                      +++++
T Consensus       160 ~~~~a  164 (165)
T 2c4o_A          160 TQKYA  164 (165)
T ss_dssp             HHHTT
T ss_pred             HHHHh
Confidence            87753


No 14 
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00  E-value=3.3e-40  Score=291.23  Aligned_cols=148  Identities=24%  Similarity=0.398  Sum_probs=140.6

Q ss_pred             CChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccC
Q 018254           50 FPAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLN  129 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfH  129 (359)
                      +++.+.+||++|++.|+++++.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+++  |
T Consensus         6 ~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--H   83 (156)
T 2e2c_A            6 ERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCW--H   83 (156)
T ss_dssp             SCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC--B
T ss_pred             cchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcc--c
Confidence            34568999999999999999999999999999999999999999999999999999999999999999999999976  9


Q ss_pred             CCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHH
Q 018254          130 PNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSC  209 (359)
Q Consensus       130 PNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~  209 (359)
                      ||||.+|+|||++|+       +.|+|++ +|.+||++|++||.+|++  ++|+|.  +|+.+| +++++|+++|+.++.
T Consensus        84 Pnv~~~G~iCl~iL~-------~~W~p~~-~i~~vL~si~~ll~~pn~--~~p~n~--~aa~~~-~d~~~y~~~~~~~~~  150 (156)
T 2e2c_A           84 PNVDQSGNICLDILK-------ENWTASY-DVRTILLSLQSLLGEPNN--ASPLNA--QAADMW-SNQTEYKKVLHEKYK  150 (156)
T ss_dssp             TTBCTTCBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHTTSCCC--SSCSCH--HHHHHT-TCHHHHHHHHHHHHH
T ss_pred             CCCccCceEECcccc-------ccCCCCC-cHHHHHHHHHHHHhCCCC--CCHHHH--HHHHHh-cCHHHHHHHHHHHHH
Confidence            999999999999997       7899998 999999999999999999  999998  678899 899999999999998


Q ss_pred             HHH
Q 018254          210 KSM  212 (359)
Q Consensus       210 k~m  212 (359)
                      +++
T Consensus       151 ~~~  153 (156)
T 2e2c_A          151 TAQ  153 (156)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            764


No 15 
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00  E-value=9.5e-41  Score=309.65  Aligned_cols=184  Identities=21%  Similarity=0.354  Sum_probs=142.8

Q ss_pred             CChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccC
Q 018254           50 FPAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLN  129 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfH  129 (359)
                      .++.+.+||++|++.|++++|.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++|  |
T Consensus        20 ~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~--H   97 (216)
T 2pwq_A           20 QGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIW--H   97 (216)
T ss_dssp             CSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC--B
T ss_pred             ccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCc--C
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999987  9


Q ss_pred             CCcC-CCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHH
Q 018254          130 PNLY-ANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILS  208 (359)
Q Consensus       130 PNVy-~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t  208 (359)
                      |||| .+|.|||++|+       +.|+|++ +|.+||++||+||.+|+|  ++|++.  +++.+|.+++..|+++|+.++
T Consensus        98 PNI~~~~G~ICL~iL~-------~~WsP~~-ti~~VL~sI~sLL~~Pnp--~dPln~--eaa~~~~~d~~~f~~~ar~~t  165 (216)
T 2pwq_A           98 PNISSQTGAICLDVLK-------NEWSPAL-TIRTALLSIQALLSDPQP--DDPQDA--EVAKMYKENHALFVKTASVWT  165 (216)
T ss_dssp             TTBCTTTCBBCCHHHH-------HHCCTTC-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHHHHCHHHHHHHHHHHH
T ss_pred             CCCcCCCCEEEchhhc-------ccCCCCC-cHHHHHHHHHHHHhCCCC--CCcccH--HHHHHHHHCHHHHHHHHHHHH
Confidence            9999 69999999997       7899998 999999999999999999  999998  789999999999999999999


Q ss_pred             HHHHHHH-HhCCCCCcHHHHHHHHHHhhHHHHHHHHHHhc
Q 018254          209 CKSMTFL-LRNPPKNFEGFVRSHFRERGHVILSACKSYLS  247 (359)
Q Consensus       209 ~k~m~~~-l~~pp~~Fe~~V~~hf~~r~~~Il~~~~~~~~  247 (359)
                      .+++..- ........+.++.-+|.+....+.-.|..|-.
T Consensus       166 ~~ya~~~~~~~~~~~v~~~~~mgf~~~~~~~al~~~~~~~  205 (216)
T 2pwq_A          166 KTFATGPKEEPREVIIKKITEMGFSEDQAKNALIKANWNE  205 (216)
T ss_dssp             HHHSCCC---------------------------------
T ss_pred             HHhcCCCcccchhhHHHHHHHcCCCHHHHHHHHHHcCCch
Confidence            8765421 11112334555556666655555555555543


No 16 
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00  E-value=4.1e-40  Score=297.96  Aligned_cols=158  Identities=28%  Similarity=0.447  Sum_probs=141.3

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCeEEE-eecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCC
Q 018254           52 AGSHKKIMQEWKILEKHLPESIFVR-VYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNP  130 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p~gI~v~-~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHP  130 (359)
                      +.+.|||++|++.|+++++.||++. ++++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+++  ||
T Consensus         6 ~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HP   83 (183)
T 3rz3_A            6 PSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMW--HP   83 (183)
T ss_dssp             CHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC--CT
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCc--cC
Confidence            5689999999999999999999999 78889999999999999999999999999999999999999999999976  99


Q ss_pred             CcCCCCceeeccccccCCC------CCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHH------cHH
Q 018254          131 NLYANGRVCLSLLNTWTGK------KSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEK------KST  198 (359)
Q Consensus       131 NVy~~GkVCLslL~tw~G~------~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~------~~~  198 (359)
                      |||.+|+||||+|++|.++      +.+.|+|++ +|.+||++||+||.+|++  ++|+|.  +|+.+|++      +.+
T Consensus        84 nV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~-~i~~vL~si~~ll~~Pn~--~~p~n~--~aa~~~~~~~~~~~~~~  158 (183)
T 3rz3_A           84 NIYETGDVCISILHPPVDDPQSGELPSERWNPTQ-NVRTILLSVISLLNEPNT--FSPANV--DASVMYRKWKESKGKDR  158 (183)
T ss_dssp             TBCTTSBBCCTTC--------------CCCCTTC-CHHHHHHHHHHHHHSCCC--SSCSSH--HHHHHHHHHHHTTTCCC
T ss_pred             CCCCCCcEehhhcCcccccccccccccCCCCCcC-cHHHHHHHHHHHHhCCCC--CCcccH--HHHHHHHhcccccccHH
Confidence            9999999999999875422      358999999 899999999999999999  999998  78899988      678


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 018254          199 AYNEDVFILSCKSMTFLL  216 (359)
Q Consensus       199 ~Yne~v~~~t~k~m~~~l  216 (359)
                      +|+++|+.++.+++....
T Consensus       159 ~y~~~v~~~v~~s~~~~~  176 (183)
T 3rz3_A          159 EYTDIIRKQVLGTKVDAE  176 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999988776553


No 17 
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00  E-value=3.1e-40  Score=291.09  Aligned_cols=146  Identities=27%  Similarity=0.473  Sum_probs=139.5

Q ss_pred             hHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCCc
Q 018254           53 GSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPNL  132 (359)
Q Consensus        53 ~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPNV  132 (359)
                      .+.+||++|++.|+++++.||++.+.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+++  ||||
T Consensus         5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HPnv   82 (155)
T 1jat_A            5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIY--HPNI   82 (155)
T ss_dssp             SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCC--BTTB
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccc--cCCC
Confidence            35799999999999999999999999999999999999999999999999999999999999999999999976  9999


Q ss_pred             CCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHHHH
Q 018254          133 YANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCKSM  212 (359)
Q Consensus       133 y~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k~m  212 (359)
                      |.+|+|||++|.       +.|+|++ +|.+||++|++||.+|++  ++|++.  +++.+|.++++.|+++|+.++.+++
T Consensus        83 ~~~G~iCl~iL~-------~~W~p~~-~i~~vl~~i~~ll~~p~~--~~p~n~--~aa~~~~~~~~~f~~~~r~~~~~~a  150 (155)
T 1jat_A           83 DRLGRICLDVLK-------TNWSPAL-QIRTVLLSIQALLASPNP--NDPLAN--DVAEDWIKNEQGAKAKAREWTKLYA  150 (155)
T ss_dssp             CTTCCBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHSCCT--TSTTCC--TTHHHHHHCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEchhhc-------cCCCCCC-CHHHHHHHHHHHHhCCCC--CCcccH--HHHHHHHHCHHHHHHHHHHHHHHhc
Confidence            999999999996       7999998 999999999999999999  999998  6799999999999999999998754


No 18 
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00  E-value=4.5e-40  Score=292.90  Aligned_cols=150  Identities=25%  Similarity=0.519  Sum_probs=140.0

Q ss_pred             CChhHHHHHHHHHHHHHhcCCCCeEEEeecC-----CcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccc
Q 018254           50 FPAGSHKKIMQEWKILEKHLPESIFVRVYEN-----RIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSF  124 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~-----~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~  124 (359)
                      -|..+.+||++|+++|++++|.||++.+.++     |+..|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+
T Consensus         7 ~~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~   86 (163)
T 3rcz_B            7 HSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPP   86 (163)
T ss_dssp             --CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCC
Confidence            3567999999999999999999999999876     89999999999999999999999999999999999999999999


Q ss_pred             ccccCCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHH
Q 018254          125 GLRLNPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDV  204 (359)
Q Consensus       125 i~rfHPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v  204 (359)
                      ++  |||||.+|+|||++|+.     .+.|+|++ +|.+||++|++||.+|++  ++|++.  +++.+|.+|+..|+++|
T Consensus        87 i~--HPnV~~~G~iCl~iL~~-----~~~W~p~~-ti~~vL~~i~~ll~~P~~--~~p~n~--~aa~~~~~d~~~y~~~~  154 (163)
T 3rcz_B           87 LF--HPNVYPSGTVCLSILNE-----EEGWKPAI-TIKQILLGIQDLLDDPNI--ASPAQT--EAYTMFKKDKVEYEKRV  154 (163)
T ss_dssp             CC--STTBCTTSBBCCGGGCT-----TTTCCTTC-CHHHHHHHHHHHHTSCCT--TSCSCH--HHHHHHHHCHHHHHHHH
T ss_pred             Cc--cCCCCCCCcEeccccCC-----CCCcCCcC-cHHHHHHHHHHHHhCCCC--CCccCH--HHHHHHHHCHHHHHHHH
Confidence            76  99999999999999972     35799998 999999999999999999  999998  78999999999999999


Q ss_pred             HHHHHHH
Q 018254          205 FILSCKS  211 (359)
Q Consensus       205 ~~~t~k~  211 (359)
                      +.++.++
T Consensus       155 r~~~~~y  161 (163)
T 3rcz_B          155 RAQAREN  161 (163)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9998774


No 19 
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00  E-value=8.9e-40  Score=289.27  Aligned_cols=151  Identities=24%  Similarity=0.474  Sum_probs=141.6

Q ss_pred             CCCChhHHHHHHHHHHHHHhc---CCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccc
Q 018254           48 DHFPAGSHKKIMQEWKILEKH---LPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSF  124 (359)
Q Consensus        48 ~~~ss~a~kRL~kEl~~L~k~---~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~  124 (359)
                      ..|++.+.+||++|+++|+++   ++.||++.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus         3 ~~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~   82 (159)
T 2bep_A            3 MAMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK   82 (159)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred             ccchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCC
Confidence            457778999999999999985   57899999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCcC-CCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHH
Q 018254          125 GLRLNPNLY-ANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNED  203 (359)
Q Consensus       125 i~rfHPNVy-~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~  203 (359)
                      ++  ||||| .+|+|||++|+       +.|+|++ +|.+||++||+||.+|+|  ++|.+.  +++.+|.++++.|+++
T Consensus        83 i~--HPni~~~~G~iCl~iL~-------~~W~p~~-~i~~vl~~i~~ll~~p~~--~~p~n~--~aa~~~~~~~~~f~~~  148 (159)
T 2bep_A           83 IW--HPNISSVTGAICLDILK-------DQWAAAM-TLRTVLLSLQALLAAAEP--DDPQDA--VVANQYKQNPEMFKQT  148 (159)
T ss_dssp             CC--BTTBCTTTCBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHHHHCHHHHHHH
T ss_pred             CC--ccCCCCCCCEEeChhhh-------ccCCCCC-cHHHHHHHHHHHHhCCCC--CCcccH--HHHHHHHHCHHHHHHH
Confidence            76  99999 69999999997       7899998 999999999999999999  999998  7899999999999999


Q ss_pred             HHHHHHHHH
Q 018254          204 VFILSCKSM  212 (359)
Q Consensus       204 v~~~t~k~m  212 (359)
                      |+.++.+++
T Consensus       149 a~~~~~~~a  157 (159)
T 2bep_A          149 ARLWAHVYA  157 (159)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHhh
Confidence            999998754


No 20 
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00  E-value=8.8e-40  Score=291.27  Aligned_cols=154  Identities=21%  Similarity=0.310  Sum_probs=143.0

Q ss_pred             CChhHHHHHHHHHHHHHhcCCCCeEEEe-ecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccccccc
Q 018254           50 FPAGSHKKIMQEWKILEKHLPESIFVRV-YENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRL  128 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~~p~gI~v~~-~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rf  128 (359)
                      -.+.+.+||++|++.|++++|.||++.+ +++++..|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+++  
T Consensus        11 ~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~--   87 (167)
T 3fn1_B           11 RVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIW--   87 (167)
T ss_dssp             CCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCC--
T ss_pred             chhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcc--
Confidence            3467899999999999999999999995 567899999998 899999999999999999999999999999999976  


Q ss_pred             CCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhcc-CCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHH
Q 018254          129 NPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLN-EKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFIL  207 (359)
Q Consensus       129 HPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~-p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~  207 (359)
                      |||||.+|+|||++|++| |.+.+.|+|++ +|.+||++||+||.+ |++  ++|+|.  +|+.+|.+++..|+++|+.+
T Consensus        88 HPnv~~~G~iCl~iL~~~-~~~~~~W~p~~-~i~~vl~~i~~ll~~~pn~--~~p~n~--eaa~~~~~~~~~f~~~~r~~  161 (167)
T 3fn1_B           88 HPNITETGEICLSLLREH-SIDGTGWAPTR-TLKDVVWGLNSLFTDLLNF--DDPLNI--EAAEHHLRDKEDFRNKVDDY  161 (167)
T ss_dssp             CSSBCTTCCBCCGGGSBC-SSSTTSBCTTC-CHHHHHHHHHHTTTTTCCS--SSCSCH--HHHHHHHHCHHHHHHHHHHH
T ss_pred             cCCCCCCCEEechhhccC-CCCCCCCCCcC-cHHHHHHHHHHHHcCCCCC--CcchhH--HHHHHHHHCHHHHHHHHHHH
Confidence            999999999999999987 66678999998 999999999999999 688  999998  78999999999999999999


Q ss_pred             HHHHH
Q 018254          208 SCKSM  212 (359)
Q Consensus       208 t~k~m  212 (359)
                      +.+++
T Consensus       162 ~~~~A  166 (167)
T 3fn1_B          162 IKRYA  166 (167)
T ss_dssp             HHHHC
T ss_pred             HHHhc
Confidence            88753


No 21 
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00  E-value=1e-39  Score=288.44  Aligned_cols=150  Identities=25%  Similarity=0.552  Sum_probs=138.8

Q ss_pred             CChhHHHHHHHHHHHHHhcCCCCeEEEeec-----CCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccc
Q 018254           50 FPAGSHKKIMQEWKILEKHLPESIFVRVYE-----NRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSF  124 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e-----~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~  124 (359)
                      |++.+.+||++|++.|++++|.||++.+.+     +|+..|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+
T Consensus         1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~   80 (157)
T 2gjd_A            1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG   80 (157)
T ss_dssp             --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred             CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence            345689999999999999999999999875     489999999999999999999999999999999999999999999


Q ss_pred             ccccCCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHH
Q 018254          125 GLRLNPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDV  204 (359)
Q Consensus       125 i~rfHPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v  204 (359)
                      ++  |||||.+|+|||++|+.     .+.|+|++ +|.+||++|++||.+|++  ++|++.  +|+.+|.+++++|+++|
T Consensus        81 i~--HPnv~~~G~iCl~iL~~-----~~~W~p~~-~i~~vl~~i~~ll~~p~~--~~p~n~--~aa~~~~~~~~~y~~~~  148 (157)
T 2gjd_A           81 FY--HPNVYPSGTICLSILNE-----DQDWRPAI-TLKQIVLGVQDLLDSPNP--NSPAQE--PAWRSFSRNKAEYDKKV  148 (157)
T ss_dssp             CC--CTTBCTTSBBCCGGGCT-----TTTCCTTC-CHHHHHHHHHHHHTSCCT--TCCCCH--HHHHHHHHCHHHHHHHH
T ss_pred             Cc--cCCCCCCCcEeeecccC-----CCCCCCCC-cHHHHHHHHHHHHhCCCC--CCccCH--HHHHHHHHCHHHHHHHH
Confidence            76  99999999999999983     24899998 999999999999999988  999998  78999999999999999


Q ss_pred             HHHHHHH
Q 018254          205 FILSCKS  211 (359)
Q Consensus       205 ~~~t~k~  211 (359)
                      +.++.++
T Consensus       149 ~~~~~~~  155 (157)
T 2gjd_A          149 LLQAKQY  155 (157)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9998765


No 22 
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00  E-value=3.9e-40  Score=288.54  Aligned_cols=145  Identities=26%  Similarity=0.555  Sum_probs=138.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEeecC-CcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCCc
Q 018254           54 SHKKIMQEWKILEKHLPESIFVRVYEN-RIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPNL  132 (359)
Q Consensus        54 a~kRL~kEl~~L~k~~p~gI~v~~~e~-~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPNV  132 (359)
                      +.+||++|++.|+++++.||++.+.++ |++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+++  ||||
T Consensus         2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HPni   79 (149)
T 1fxt_A            2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVY--HPNI   79 (149)
T ss_dssp             CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCC--BTTB
T ss_pred             hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCc--cCCC
Confidence            479999999999999999999999887 9999999999999999999999999999999999999999999976  9999


Q ss_pred             CC-CCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHHH
Q 018254          133 YA-NGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCKS  211 (359)
Q Consensus       133 y~-~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k~  211 (359)
                      |. +|+|||++|.       +.|+|++ +|.+||++||+||.+|+|  ++|.+.  +|+.+|.++++.|+++|+.++.++
T Consensus        80 ~~~~G~iCl~iL~-------~~W~p~~-~i~~vl~~i~~ll~~p~~--~~p~n~--~aa~~~~~d~~~f~~~a~~~~~~~  147 (149)
T 1fxt_A           80 SSVTGAICLDILK-------NAWSPVI-TLKSALISLQALLQSPEP--NDPQDA--EVAQHYLRDRESFNKTAALWTRLY  147 (149)
T ss_dssp             CSSSCCBCCHHHH-------TSCCTTC-CHHHHHHHHHHHHHSCCS--SSCSSH--HHHHHHHHCSSHHHHHHHHHHHHH
T ss_pred             cCCCCeEeCCcCC-------CCCCCCC-cHHHHHHHHHHHHhCCCC--CCcccH--HHHHHHHHCHHHHHHHHHHHHHHh
Confidence            97 9999999997       7899998 999999999999999999  999998  789999999999999999999875


Q ss_pred             H
Q 018254          212 M  212 (359)
Q Consensus       212 m  212 (359)
                      +
T Consensus       148 a  148 (149)
T 1fxt_A          148 A  148 (149)
T ss_dssp             C
T ss_pred             c
Confidence            3


No 23 
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00  E-value=7.9e-40  Score=295.54  Aligned_cols=148  Identities=26%  Similarity=0.385  Sum_probs=138.7

Q ss_pred             CChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccC
Q 018254           50 FPAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLN  129 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfH  129 (359)
                      +++.+.+||++|++.|+++++.||++.++++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++|  |
T Consensus        27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~--H  104 (179)
T 1i7k_A           27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCY--H  104 (179)
T ss_dssp             ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCC--S
T ss_pred             cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCc--c
Confidence            56779999999999999999999999999999999999999999999999999999999999999999999999976  9


Q ss_pred             CCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHH
Q 018254          130 PNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSC  209 (359)
Q Consensus       130 PNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~  209 (359)
                      ||||.+|+|||++|.       +.|+|++ +|.+||++|++||.+|++  ++|++.  +++.+| +++++|+++|+.++.
T Consensus       105 PNV~~~G~ICL~iL~-------~~WsP~~-ti~~vL~sI~sll~~Pn~--~~Pln~--~aa~l~-~d~~~f~~~v~~~v~  171 (179)
T 1i7k_A          105 PNVDTQGNISLDILK-------EKWSALY-DVRTILLSIQSLLGEPNI--DSPLNT--HAAELW-KNPTAFKKYLQETYS  171 (179)
T ss_dssp             TTBCTTCBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHT-TSHHHHHHHHHHHHH
T ss_pred             CccccCCeEEcccCc-------CcCCCCC-CHHHHHHHHHHHHhCCCC--cchhhH--HHHHHh-hCHHHHHHHHHHHHH
Confidence            999999999999997       7899998 999999999999999999  999998  679999 999999999998877


Q ss_pred             HHH
Q 018254          210 KSM  212 (359)
Q Consensus       210 k~m  212 (359)
                      +++
T Consensus       172 ~~~  174 (179)
T 1i7k_A          172 KQV  174 (179)
T ss_dssp             TTC
T ss_pred             HHh
Confidence            654


No 24 
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00  E-value=1.6e-39  Score=288.29  Aligned_cols=153  Identities=27%  Similarity=0.497  Sum_probs=141.1

Q ss_pred             CCCChhHHHHHHHHHHHHHhcCCCCeEEEeec-----CCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeec
Q 018254           48 DHFPAGSHKKIMQEWKILEKHLPESIFVRVYE-----NRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYR  122 (359)
Q Consensus        48 ~~~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e-----~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~  122 (359)
                      .+|++.+.+||++|++.|++++|.||++.+.+     +|+..|+++|.||+||||+||+|+|+|.||++||++||+|+|.
T Consensus         2 ~~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~   81 (161)
T 2grr_A            2 SHMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE   81 (161)
T ss_dssp             --CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred             CcccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe
Confidence            34677899999999999999999999999874     6899999999999999999999999999999999999999999


Q ss_pred             ccccccCCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHH
Q 018254          123 SFGLRLNPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNE  202 (359)
Q Consensus       123 T~i~rfHPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne  202 (359)
                      |+++  |||||.+|+|||++|+.     .+.|+|++ +|.+||++|++||.+|++  ++|++.  +|+.+|.+++++|++
T Consensus        82 t~i~--HPnv~~~G~iCl~iL~~-----~~~W~p~~-~i~~vl~~i~~ll~~p~~--~~p~n~--~aa~~~~~~~~~y~~  149 (161)
T 2grr_A           82 PPLF--HPNVYPSGTVCLSILEE-----DKDWRPAI-TIKQILLGIQELLNEPNI--QSPAQA--EAYTIYCQNRVEYEK  149 (161)
T ss_dssp             SCCC--STTBCTTSBBCCGGGCT-----TTTCCTTC-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHHHHCHHHHHH
T ss_pred             cCcc--cCCCCCCCeEeehhcCC-----CCCcCCCC-cHHHHHHHHHHHHhCCCC--CCccCH--HHHHHHHHCHHHHHH
Confidence            9976  99999999999999972     35899998 999999999999999998  999998  789999999999999


Q ss_pred             HHHHHHHHHH
Q 018254          203 DVFILSCKSM  212 (359)
Q Consensus       203 ~v~~~t~k~m  212 (359)
                      +|+.++.+++
T Consensus       150 ~~~~~~~~~a  159 (161)
T 2grr_A          150 RVRAQAKKFA  159 (161)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHHHh
Confidence            9999987753


No 25 
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00  E-value=1.2e-39  Score=292.29  Aligned_cols=149  Identities=24%  Similarity=0.454  Sum_probs=112.1

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCeEEEeec-CCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCC
Q 018254           52 AGSHKKIMQEWKILEKHLPESIFVRVYE-NRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNP  130 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p~gI~v~~~e-~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHP  130 (359)
                      +.+.+||++|+++|++++|.||++.+.+ +|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+++  ||
T Consensus        16 ~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~--HP   93 (172)
T 2awf_A           16 PRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIW--HP   93 (172)
T ss_dssp             CTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC--CT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCc--cC
Confidence            5689999999999999999999999865 79999999999999999999999999999999999999999999976  99


Q ss_pred             CcCCCCceeeccccccCC------CCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHH-HHHHH
Q 018254          131 NLYANGRVCLSLLNTWTG------KKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKST-AYNED  203 (359)
Q Consensus       131 NVy~~GkVCLslL~tw~G------~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~-~Yne~  203 (359)
                      |||.+|+|||++|++|..      ...+.|+|++ +|.+||++||+||.+|++  ++|+|.  +|+.+|.++++ +|+++
T Consensus        94 NV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~-ti~~vL~sI~sll~~Pn~--~~p~n~--~aa~~~~~d~~~~f~~~  168 (172)
T 2awf_A           94 NVDKNGDVCISILHEPGEDKYGYEKPEERWLPIH-TVETIMISVISMLADPNG--DSPANV--DAAKEWREDRNGEFKRK  168 (172)
T ss_dssp             TBCTTCBBCCGGGSCC---------CTTSCCTTC-CHHHHHHHHHHHHSCC-----------------------------
T ss_pred             CCCCCCcEehhhcCCcccccccccccCCCCCCcC-cHHHHHHHHHHHHHCcCC--CCccCH--HHHHHHHHCcHHHHHHH
Confidence            999999999999987532      2458999998 999999999999999998  999998  67999999999 99999


Q ss_pred             HHHH
Q 018254          204 VFIL  207 (359)
Q Consensus       204 v~~~  207 (359)
                      |+.+
T Consensus       169 vr~~  172 (172)
T 2awf_A          169 VARC  172 (172)
T ss_dssp             ----
T ss_pred             HHhC
Confidence            8753


No 26 
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00  E-value=1.6e-39  Score=290.95  Aligned_cols=151  Identities=19%  Similarity=0.348  Sum_probs=140.8

Q ss_pred             CCCCCCChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccc
Q 018254           45 NGRDHFPAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSF  124 (359)
Q Consensus        45 ~~~~~~ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~  124 (359)
                      -...+|++.+.+||++|+++|+++++.||++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus        15 ~~~~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~   94 (169)
T 1yrv_A           15 VPRGSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITI   94 (169)
T ss_dssp             CCTTGGGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSC
T ss_pred             cccCccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCC
Confidence            45667888899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCc-CCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHH
Q 018254          125 GLRLNPNL-YANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNED  203 (359)
Q Consensus       125 i~rfHPNV-y~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~  203 (359)
                      +|  |||| |.+|+|||++|++     .+.|+|++ +|.+||++||+||.+|++  ++|+|.  +|+.+|.++++.|+++
T Consensus        95 i~--HPNI~~~~G~ICL~iL~~-----~~~WsP~~-ti~~vL~sI~sll~~Pn~--~~Pln~--eaa~l~~~d~~~y~~~  162 (169)
T 1yrv_A           95 PF--HPNVDPHTGQPCIDFLDN-----PEKWNTNY-TLSSILLALQVMLSNPVL--ENPVNL--EAARILVKDESLYRTI  162 (169)
T ss_dssp             CC--CTTBCTTTCCBCCHHHHC-----GGGCCTTC-CHHHHHHHHHHHHTSCCT--TSCSCH--HHHHHHHSCHHHHHHH
T ss_pred             Cc--cCcccCCCCeEeehhhcC-----CcCCCCcC-CHHHHHHHHHHHHhCCCC--CCchhH--HHHHHHHHCHHHHHHH
Confidence            76  9999 8999999999972     37899998 999999999999999999  999998  7899999999999987


Q ss_pred             HHHHH
Q 018254          204 VFILS  208 (359)
Q Consensus       204 v~~~t  208 (359)
                       +.++
T Consensus       163 -~~~v  166 (169)
T 1yrv_A          163 -LRLF  166 (169)
T ss_dssp             -HHHH
T ss_pred             -HHHh
Confidence             5554


No 27 
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00  E-value=4e-39  Score=294.30  Aligned_cols=147  Identities=26%  Similarity=0.470  Sum_probs=140.5

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCC
Q 018254           52 AGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPN  131 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPN  131 (359)
                      +.+.+||++|++.|++++|.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+++  |||
T Consensus        47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~--HPN  124 (194)
T 3bzh_A           47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIY--HCN  124 (194)
T ss_dssp             HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC--BTT
T ss_pred             cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCc--cce
Confidence            458899999999999999999999999999999999999999999999999999999999999999999999976  999


Q ss_pred             cCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHHH
Q 018254          132 LYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCKS  211 (359)
Q Consensus       132 Vy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k~  211 (359)
                      ||.+|.|||++|.       +.|+|.+ +|.+||++|++||.+|+|  ++|++.  +++.+|.+++..|+++|+.++.++
T Consensus       125 V~~~G~ICL~iL~-------~~WsP~~-ti~~vL~sI~~ll~~pnp--~~Pln~--~aa~l~~~d~~~f~~~ar~~t~~y  192 (194)
T 3bzh_A          125 INSQGVICLDILK-------DNWSPAL-TISKVLLSICSLLTDCNP--ADPLVG--SIATQYMTNRAEHDRMARQWTKRY  192 (194)
T ss_dssp             BCTTCBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             ECCCCceechhhh-------ccCCCcC-cHHHHHHHHHHHHhCCCC--ccchhH--HHHHHHHHCHHHHHHHHHHHHHHh
Confidence            9999999999997       7999998 999999999999999999  999998  679999999999999999998775


Q ss_pred             H
Q 018254          212 M  212 (359)
Q Consensus       212 m  212 (359)
                      +
T Consensus       193 a  193 (194)
T 3bzh_A          193 A  193 (194)
T ss_dssp             C
T ss_pred             h
Confidence            3


No 28 
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00  E-value=3e-39  Score=295.96  Aligned_cols=150  Identities=24%  Similarity=0.483  Sum_probs=140.3

Q ss_pred             CChhHHHHHHHHHHHHHhc---CCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccccc
Q 018254           50 FPAGSHKKIMQEWKILEKH---LPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGL  126 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~---~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~  126 (359)
                      |+..+.+||++|+++|+++   ++.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++|
T Consensus         2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~   81 (201)
T 3k9o_A            2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW   81 (201)
T ss_dssp             --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence            4566899999999999886   4789999999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCcC-CCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHH
Q 018254          127 RLNPNLY-ANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVF  205 (359)
Q Consensus       127 rfHPNVy-~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~  205 (359)
                        ||||| .+|+|||++|.       +.|+|++ +|.+||++||+||.+|+|  ++|.+.  +++.+|.+++..|+++|+
T Consensus        82 --HPnv~~~~G~iCl~iL~-------~~W~p~~-~i~~vL~~i~~ll~~p~p--~~p~n~--~aa~~~~~~~~~f~~~a~  147 (201)
T 3k9o_A           82 --HPNISSVTGAICLDILK-------DQWAAAM-TLRTVLLSLQALLAAAEP--DDPQDA--VVANQYKQNPEMFKQTAR  147 (201)
T ss_dssp             --BTTBCTTTCBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHHHHCHHHHHHHHH
T ss_pred             --cCCCcCCCCeeeCcccc-------cCCCCCC-CHHHHHHHHHHHhcCCCC--CCcccH--HHHHHHHHCHHHHHHHHH
Confidence              99999 69999999997       7999998 999999999999999999  999998  789999999999999999


Q ss_pred             HHHHHHHH
Q 018254          206 ILSCKSMT  213 (359)
Q Consensus       206 ~~t~k~m~  213 (359)
                      .++.+++.
T Consensus       148 ~~~~~~a~  155 (201)
T 3k9o_A          148 LWAHVYAG  155 (201)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHhcc
Confidence            99988664


No 29 
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00  E-value=4.1e-39  Score=294.03  Aligned_cols=147  Identities=23%  Similarity=0.499  Sum_probs=137.0

Q ss_pred             hhHHHHHHHHHHHHHhcCC-------------CCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCe
Q 018254           52 AGSHKKIMQEWKILEKHLP-------------ESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPM  118 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p-------------~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~  118 (359)
                      +.+.+||++|++.|+++++             .||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+
T Consensus        31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~  110 (193)
T 2f4z_A           31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPK  110 (193)
T ss_dssp             -CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred             CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCe
Confidence            4588999999999999887             799999999999999999999999999999999999999999999999


Q ss_pred             eeecccccccCCCcC-CCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcH
Q 018254          119 VHYRSFGLRLNPNLY-ANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKS  197 (359)
Q Consensus       119 V~f~T~i~rfHPNVy-~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~  197 (359)
                      |+|.|+++  ||||| .+|+|||++|+       +.|+|++ +|.+||++||+||.+|+|  ++|.+.  +++.+|.+++
T Consensus       111 V~F~T~i~--HPNI~~~~G~ICL~iL~-------~~WsP~~-ti~~vL~sI~sll~~pnp--~~P~n~--~aa~l~~~d~  176 (193)
T 2f4z_A          111 MKFVTKIW--HPNISSQTGAICLDILK-------HEWSPAL-TIRTALLSIQAMLADPVP--TDPQDA--EVAKMMIENH  176 (193)
T ss_dssp             EEESSCCC--BTTBCTTTCBBCCGGGT-------TTCCTTS-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHHHHCH
T ss_pred             EEEecCCc--cCCCcCCCCEEECcccc-------ccCCCCC-CHHHHHHHHHHHHhCCCC--CCcccH--HHHHHHHHCH
Confidence            99999986  99999 69999999997       7899998 999999999999999999  999998  7899999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 018254          198 TAYNEDVFILSCKSM  212 (359)
Q Consensus       198 ~~Yne~v~~~t~k~m  212 (359)
                      +.|+++|+.++.+++
T Consensus       177 ~~f~~~ar~~t~~ya  191 (193)
T 2f4z_A          177 PLFVQTAKLWTETFA  191 (193)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHc
Confidence            999999999998764


No 30 
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00  E-value=1.1e-38  Score=280.92  Aligned_cols=145  Identities=23%  Similarity=0.448  Sum_probs=137.8

Q ss_pred             HHHHHHHHHHHHHhcCCCCeEE-EeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCCc
Q 018254           54 SHKKIMQEWKILEKHLPESIFV-RVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPNL  132 (359)
Q Consensus        54 a~kRL~kEl~~L~k~~p~gI~v-~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPNV  132 (359)
                      +.+||++|++.|++++|.||++ .++++|++.|+++|. |+||||+||.|+|+|.||++||++||+|+|.|+++  ||||
T Consensus         5 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HPnV   81 (155)
T 1wzv_A            5 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIY--HPNV   81 (155)
T ss_dssp             CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCC--BTTB
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCc--cCcC
Confidence            5799999999999999999999 889999999999999 99999999999999999999999999999999976  9999


Q ss_pred             CCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHHHH
Q 018254          133 YANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCKSM  212 (359)
Q Consensus       133 y~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k~m  212 (359)
                      |.+|+|||++|+      .+.|+|++ +|.+||++|++||.+|++  ++|++.  +|+.+|.++++.|+++|+.++.+++
T Consensus        82 ~~~G~iCl~iL~------~~~W~p~~-~i~~vl~~i~~ll~~p~~--~~p~n~--~aa~~~~~~~~~y~~~~r~~~~~~a  150 (155)
T 1wzv_A           82 DENGQICLPIIS------SENWKPCT-KTCQVLEALNVLVNRPNI--REPLRM--DLADLLTQNPELFRKNAEEFTLRFG  150 (155)
T ss_dssp             CTTCBCCCGGGC------TTTCCTTC-CHHHHHHHHHHHHHSCCS--SSCSSH--HHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred             CCCCeEeecCCC------ccCCCCCC-cHHHHHHHHHHHHhCCCC--CchHHH--HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999994      28999998 999999999999999999  999998  7899999999999999999988754


No 31 
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00  E-value=3.1e-38  Score=298.95  Aligned_cols=153  Identities=24%  Similarity=0.466  Sum_probs=143.5

Q ss_pred             CCCCChhHHHHHHHHHHHHHhc---CCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecc
Q 018254           47 RDHFPAGSHKKIMQEWKILEKH---LPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRS  123 (359)
Q Consensus        47 ~~~~ss~a~kRL~kEl~~L~k~---~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T  123 (359)
                      ...|++.+.+||++|+++|+++   ++.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|
T Consensus        51 ~~~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T  130 (253)
T 3e46_A           51 EFDMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT  130 (253)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred             cccccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecC
Confidence            3567788999999999999886   4789999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCcC-CCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHH
Q 018254          124 FGLRLNPNLY-ANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNE  202 (359)
Q Consensus       124 ~i~rfHPNVy-~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne  202 (359)
                      ++|  ||||| .+|+|||++|.       +.|+|.+ +|.+||++||+||.+|+|  ++|.+.  +++.+|.++++.|++
T Consensus       131 ~i~--HPNV~~~~G~ICL~iL~-------~~WsP~~-ti~~vL~sI~~ll~~pnp--~~Pln~--eaa~l~~~d~~~f~~  196 (253)
T 3e46_A          131 KIW--HPNISSVTGAICLDILK-------DQWAAAM-TLRTVLLSLQALLAAAEP--DDPQDA--VVANQYKQNPEMFKQ  196 (253)
T ss_dssp             CCC--BTTBCTTTCBBCCGGGT-------TCCCTTC-CHHHHHHHHHHHHHSCCT--TSCSCH--HHHHHHHHCHHHHHH
T ss_pred             CCc--cCCccCCCCeeeccccc-------CCCCCCC-CHHHHHHHHHHHhcCCCC--CChhhH--HHHHHHHHCHHHHHH
Confidence            987  99999 69999999997       8999998 999999999999999999  999998  789999999999999


Q ss_pred             HHHHHHHHHHH
Q 018254          203 DVFILSCKSMT  213 (359)
Q Consensus       203 ~v~~~t~k~m~  213 (359)
                      +|+.++.+++.
T Consensus       197 ~ar~~t~~yA~  207 (253)
T 3e46_A          197 TARLWAHVYAG  207 (253)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHhcc
Confidence            99999988664


No 32 
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00  E-value=5.7e-38  Score=281.36  Aligned_cols=151  Identities=23%  Similarity=0.373  Sum_probs=137.2

Q ss_pred             CCChhHHHHHHHHHHHHHh-c-C------CC---CeEEEe-ecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCC
Q 018254           49 HFPAGSHKKIMQEWKILEK-H-L------PE---SIFVRV-YENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHP  116 (359)
Q Consensus        49 ~~ss~a~kRL~kEl~~L~k-~-~------p~---gI~v~~-~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~P  116 (359)
                      .|++.+.+||++|++.|++ + +      |.   ++.+.+ +++|++.|+++|.||++|||+||+|+|+|.||++||++|
T Consensus         2 ~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P   81 (172)
T 2y9m_A            2 AMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNP   81 (172)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred             CCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCC
Confidence            4677899999999999998 4 3      44   567788 889999999999999999999999999999999999999


Q ss_pred             Ceeeecc-cccccCCCc-CCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHH
Q 018254          117 PMVHYRS-FGLRLNPNL-YANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWE  194 (359)
Q Consensus       117 P~V~f~T-~i~rfHPNV-y~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~  194 (359)
                      |+|+|.| +++  |||| +.+|+|||++|+      .+.|+|++ +|.+||++||+||.+|++  ++|++.  +|+.+|.
T Consensus        82 P~v~f~t~~i~--HPni~~~~G~iCl~iL~------~~~W~p~~-~i~~vL~si~~ll~~p~~--~~p~n~--~aa~~~~  148 (172)
T 2y9m_A           82 PKISFMQNNIL--HCNVKSATGEICLNILK------PEEWTPVW-DLLHCVHAVWRLLREPVC--DSPLDV--DIGNIIR  148 (172)
T ss_dssp             CEEEECTTSCC--CTTEETTTTEECCGGGS------TTTCCTTC-CHHHHHHHHHHHHHSCCT--TSCSSH--HHHHHHT
T ss_pred             CEEEEeeCCee--cCCCcCCCCEEeccccC------CCCCCCcC-cHHHHHHHHHHHHhCCCC--CCccCH--HHHHHHH
Confidence            9999999 876  9999 589999999996      47899998 999999999999999999  999998  7899999


Q ss_pred             H-cHHHHHHHHHHHHHHHH
Q 018254          195 K-KSTAYNEDVFILSCKSM  212 (359)
Q Consensus       195 ~-~~~~Yne~v~~~t~k~m  212 (359)
                      + +++.|+++|+.++.++.
T Consensus       149 ~~d~~~f~~~~~~~~~~~~  167 (172)
T 2y9m_A          149 CGDMSAYQGIVKYFLAERE  167 (172)
T ss_dssp             TTCHHHHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHHH
Confidence            9 99999999999987654


No 33 
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00  E-value=1.4e-38  Score=294.93  Aligned_cols=146  Identities=26%  Similarity=0.551  Sum_probs=137.4

Q ss_pred             hHHHHHHHHHHHHHhcCCCCeEEEeecC-CcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCC
Q 018254           53 GSHKKIMQEWKILEKHLPESIFVRVYEN-RIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPN  131 (359)
Q Consensus        53 ~a~kRL~kEl~~L~k~~p~gI~v~~~e~-~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPN  131 (359)
                      .+.+||++|++.|++++|.||++.+.++ +++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++|  |||
T Consensus         2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~--HPN   79 (215)
T 1tte_A            2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVY--HPN   79 (215)
T ss_dssp             TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCC--CSS
T ss_pred             hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCc--cCc
Confidence            3689999999999999999999999776 5679999999999999999999999999999999999999999977  999


Q ss_pred             cCC-CCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHH
Q 018254          132 LYA-NGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCK  210 (359)
Q Consensus       132 Vy~-~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k  210 (359)
                      ||. +|.|||++|+       +.|+|++ ||.+||++||+||.+|+|  ++|.+.  +++.+|.+++..|+++|+.++.+
T Consensus        80 I~~~~G~ICL~iL~-------~~WsP~~-ti~~VL~sI~sLL~~Pnp--~~Pln~--eaa~~~~~d~~~f~~~ar~~t~~  147 (215)
T 1tte_A           80 ISSVTGAICLDILR-------NAWSPVI-TLKSALISLQALLQSPEP--NDPQDA--EVAQHYLRDRESFNKTAALWTRL  147 (215)
T ss_dssp             SCSSSSCCCSSTTT-------CCSCTTC-CHHHHHHHHHHHHTSCCC--SSCSCH--HHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CcCCCCEEECccCC-------CCCCCcC-cHHHHHHHHHHHHhCCCC--CCccCH--HHHHHHHHCHHHHHHHHHHHHHH
Confidence            998 9999999997       7999998 999999999999999999  999998  67999999999999999988877


Q ss_pred             HH
Q 018254          211 SM  212 (359)
Q Consensus       211 ~m  212 (359)
                      ++
T Consensus       148 yA  149 (215)
T 1tte_A          148 YA  149 (215)
T ss_dssp             SS
T ss_pred             hc
Confidence            54


No 34 
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00  E-value=1.6e-37  Score=275.56  Aligned_cols=142  Identities=23%  Similarity=0.450  Sum_probs=133.4

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCeEEE-eecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCC
Q 018254           52 AGSHKKIMQEWKILEKHLPESIFVR-VYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNP  130 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p~gI~v~-~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHP  130 (359)
                      +.+.+||++|++.|  ++|+||++. ++++|+..|+++| ||++|||+||.|+|+|.||++||++||+|+|.|+++  ||
T Consensus         5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HP   79 (160)
T 1y8x_A            5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVY--HP   79 (160)
T ss_dssp             CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCC--BT
T ss_pred             cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCc--cC
Confidence            45899999999999  578999998 7899999999988 999999999999999999999999999999999976  99


Q ss_pred             CcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHH
Q 018254          131 NLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCK  210 (359)
Q Consensus       131 NVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k  210 (359)
                      |||.+|+|||++|+       +.|+|++ +|.+||++|++||.+|++  ++|++.  +|+.+|.++++.|+++|+.++..
T Consensus        80 nv~~~G~iCl~iL~-------~~W~p~~-~i~~vL~~i~~ll~~Pn~--~~p~n~--~aa~~~~~~~~~f~~~v~~~v~~  147 (160)
T 1y8x_A           80 NIDLEGNVCLNILR-------EDWKPVL-TINSIIYGLQYLFLEPNP--EDPLNK--EAAEVLQNNRRLFEQNVQRSMRG  147 (160)
T ss_dssp             TBCTTCBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHSCCC--SSCSCH--HHHHHHHSCHHHHHHHHHHHHHS
T ss_pred             cCCCCCeEEcccch-------hhccCCC-CHHHHHHHHHHHHhCCCC--CCccCH--HHHHHHHHCHHHHHHHHHHHHhh
Confidence            99999999999997       7899998 999999999999999999  999998  78999999999999999877653


No 35 
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00  E-value=3.1e-37  Score=278.69  Aligned_cols=143  Identities=22%  Similarity=0.422  Sum_probs=134.5

Q ss_pred             ChhHHHHHHHHHHHHHhcCCCCeEEE-eecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccC
Q 018254           51 PAGSHKKIMQEWKILEKHLPESIFVR-VYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLN  129 (359)
Q Consensus        51 ss~a~kRL~kEl~~L~k~~p~gI~v~-~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfH  129 (359)
                      ++.+.+||++|+++|  ++|+||++. ++++|++.|+++| ||++|||+||.|+|+|.||++||++||+|+|.|+++  |
T Consensus        24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~--H   98 (180)
T 2nvu_C           24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVY--H   98 (180)
T ss_dssp             CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCC--B
T ss_pred             ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCc--c
Confidence            467899999999999  678999998 8899999999988 999999999999999999999999999999999976  9


Q ss_pred             CCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHH
Q 018254          130 PNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSC  209 (359)
Q Consensus       130 PNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~  209 (359)
                      ||||.+|.|||++|+       +.|+|++ +|.+||++|++||.+|++  ++|++.  +|+.+|.++++.|+++|+.++.
T Consensus        99 PNV~~~G~iCl~iL~-------~~W~p~~-~i~~vL~si~~ll~~Pn~--~~p~n~--~aa~~~~~d~~~f~~~v~~~v~  166 (180)
T 2nvu_C           99 PNIDLEGNVALNILR-------EDWKPVL-TINSIIYGLQYLFLEPNP--EDPLNK--EAAEVLQNNRRLFEQNVQRSMR  166 (180)
T ss_dssp             TTBCTTSBBCCGGGT-------TSCCTTC-CHHHHHHHHHHHHHSCCT--TSCSSH--HHHHHHHHCHHHHHHHHHHHHH
T ss_pred             CCCCCCCcEEccccc-------ccCCCCC-CHHHHHHHHHHHHhCCCC--CCccCH--HHHHHHHHCHHHHHHHHHHHHh
Confidence            999999999999997       7899998 999999999999999999  999998  7899999999999999987765


Q ss_pred             H
Q 018254          210 K  210 (359)
Q Consensus       210 k  210 (359)
                      .
T Consensus       167 ~  167 (180)
T 2nvu_C          167 G  167 (180)
T ss_dssp             S
T ss_pred             h
Confidence            3


No 36 
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00  E-value=4.3e-38  Score=276.97  Aligned_cols=143  Identities=22%  Similarity=0.408  Sum_probs=134.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCCcC
Q 018254           54 SHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPNLY  133 (359)
Q Consensus        54 a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPNVy  133 (359)
                      +.+||++|++.|+++   |+++.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+++  |||||
T Consensus         3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~--HPni~   77 (152)
T 2onu_A            3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLL--HPNVD   77 (152)
T ss_dssp             CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC--CTTBC
T ss_pred             HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCc--cCcCc
Confidence            468999999999874   7899999999999999999999999999999999999999999999999999976  99999


Q ss_pred             -CCCceeeccccccCCCCCCCcccCcccHHHHHHH-HHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHHH
Q 018254          134 -ANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVS-IQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCKS  211 (359)
Q Consensus       134 -~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~s-Iq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k~  211 (359)
                       .+|+|||++|+       +.|+|++ +|.+||++ ||+||.+|++  ++|++.  +|+.+|.++++.|+++|+.++.++
T Consensus        78 ~~~G~iCl~il~-------~~W~p~~-~i~~vl~~ii~~Ll~~Pn~--~~P~n~--~aa~~~~~d~~~y~~~v~~~~~~~  145 (152)
T 2onu_A           78 EASGSVCLDVIN-------QTWTPLY-SLVNVFEVFLPQLLTYPNP--SDPLNS--DAASLLMKDKNIYEEKVKEYVKLY  145 (152)
T ss_dssp             TTTCBBCHHHHH-------HHCCTTC-CHHHHHHTHHHHHHHSCCC--SSCSSH--HHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             CcCCeEeccccc-------ccCCCCC-CHHHHHHHHHHHHHhCCCC--CCcccH--HHHHHHHHCHHHHHHHHHHHHHHh
Confidence             59999999997       7899998 99999999 6999999999  999998  789999999999999999998876


Q ss_pred             HH
Q 018254          212 MT  213 (359)
Q Consensus       212 m~  213 (359)
                      +.
T Consensus       146 a~  147 (152)
T 2onu_A          146 AS  147 (152)
T ss_dssp             SC
T ss_pred             cc
Confidence            53


No 37 
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00  E-value=4.2e-38  Score=277.05  Aligned_cols=146  Identities=25%  Similarity=0.472  Sum_probs=134.6

Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEE-eecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCCc
Q 018254           54 SHKKIMQEWKILEKHLPESIFVR-VYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPNL  132 (359)
Q Consensus        54 a~kRL~kEl~~L~k~~p~gI~v~-~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPNV  132 (359)
                      +.+||++|++.|++++|.||.+. ++++|++.|+++|. |+||||+||.|+|+|.||++||++||+|+|.|+++  ||||
T Consensus         3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--HPnv   79 (154)
T 1c4z_D            3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIY--HPNI   79 (154)
T ss_dssp             -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCC--CTTB
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCc--cccC
Confidence            56899999999999999999855 57889999999998 99999999999999999999999999999999976  9999


Q ss_pred             CCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHHHH
Q 018254          133 YANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCKSM  212 (359)
Q Consensus       133 y~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k~m  212 (359)
                      |.+|+|||++|+      .+.|+|++ +|.+||++|++||.+|++  ++|++.  +++.+|.++++.|+++|+.++.+++
T Consensus        80 ~~~G~iCl~iL~------~~~W~p~~-~i~~vl~~i~~ll~~p~~--~~p~n~--~aa~~~~~~~~~f~~~~~~~~~~~a  148 (154)
T 1c4z_D           80 DEKGQVCLPVIS------AENWKPAT-KTDQVIQSLIALVNDPQP--EHPLRA--DLAEEYSKDRKKFCKNAEEFTKKYG  148 (154)
T ss_dssp             CTTCBBCCTTTS------SSSCCTTC-CHHHHHHHHHHHHHSCCC--SSCSCH--HHHHHHHTCSSTTHHHHHHHHTTC-
T ss_pred             CCCCEEECCCCC------CCCCCCCC-cHHHHHHHHHHHHcCCCC--CchhhH--HHHHHHHHhHHHHHHHHHHHHHHhc
Confidence            999999999996      37899999 999999999999999999  999998  6799999999999999999987755


Q ss_pred             H
Q 018254          213 T  213 (359)
Q Consensus       213 ~  213 (359)
                      .
T Consensus       149 ~  149 (154)
T 1c4z_D          149 E  149 (154)
T ss_dssp             -
T ss_pred             c
Confidence            4


No 38 
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00  E-value=1.6e-37  Score=280.49  Aligned_cols=149  Identities=19%  Similarity=0.415  Sum_probs=134.1

Q ss_pred             CCCCCh--hHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccc
Q 018254           47 RDHFPA--GSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSF  124 (359)
Q Consensus        47 ~~~~ss--~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~  124 (359)
                      ...|++  .+.+||++|++.|+.   +||++.+. +|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus        17 ~~~ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~   92 (179)
T 2z5d_A           17 RGSMSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNK   92 (179)
T ss_dssp             ------CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred             cccCCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecC
Confidence            334443  589999999999984   58888887 579999999999999999999999999999999999999999999


Q ss_pred             ccccCCCcCC-CCceeeccccccCCCCCCCcccCcccHHHHHHH-HHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHH
Q 018254          125 GLRLNPNLYA-NGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVS-IQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNE  202 (359)
Q Consensus       125 i~rfHPNVy~-~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~s-Iq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne  202 (359)
                      ++  |||||. +|+|||++|+       +.|+|++ +|.+||++ |++||.+|+|  ++|.+.  +++.+|.+++++|++
T Consensus        93 i~--HPNV~~~~G~ICL~iL~-------~~WsP~~-ti~~iL~s~I~~Ll~~Pn~--~~p~n~--eaa~~~~~d~~~y~~  158 (179)
T 2z5d_A           93 IF--HPNIDEASGTVCLDVIN-------QTWTALY-DLTNIFESFLPQLLAYPNP--IDPLNG--DAAAMYLHRPEEYKQ  158 (179)
T ss_dssp             CC--BTTBCTTTCBBCHHHHH-------HHCCTTC-CTTHHHHTHHHHHHHSCCC--SSCSCH--HHHHHHHHCHHHHHH
T ss_pred             Cc--cCcCCCCCCeEeccccc-------cCCCCCC-CHHHHHHHHHHHHHhCCCC--CCccCH--HHHHHHHHCHHHHHH
Confidence            76  999998 9999999997       7899998 99999999 9999999999  999998  789999999999999


Q ss_pred             HHHHHHHHHHH
Q 018254          203 DVFILSCKSMT  213 (359)
Q Consensus       203 ~v~~~t~k~m~  213 (359)
                      +|+.++.+++.
T Consensus       159 ~vr~~~~~~a~  169 (179)
T 2z5d_A          159 KIKEYIQKYAT  169 (179)
T ss_dssp             HHHHHHHHHSS
T ss_pred             HHHHHHHHHcc
Confidence            99999987653


No 39 
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00  E-value=3.3e-37  Score=276.47  Aligned_cols=154  Identities=19%  Similarity=0.401  Sum_probs=137.9

Q ss_pred             hHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCCc
Q 018254           53 GSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPNL  132 (359)
Q Consensus        53 ~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPNV  132 (359)
                      .+.+||++|++.|+++++ ++   +.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+++  ||||
T Consensus        12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~--HPNi   85 (171)
T 1yf9_A           12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRIL--HPNV   85 (171)
T ss_dssp             -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC--BTTB
T ss_pred             cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcc--cccC
Confidence            467999999999999874 44   35889999999999999999999999999999999999999999999976  9999


Q ss_pred             C-CCCceeeccccccCCCCCCCcccCcccHHHHHHHH-HHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHH
Q 018254          133 Y-ANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSI-QALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCK  210 (359)
Q Consensus       133 y-~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sI-q~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k  210 (359)
                      | .+|+|||++|+       +.|+|++ +|.+||++| |+||.+|++  ++|++.  +|+.+|.++++.|+++|+.++.+
T Consensus        86 ~~~~G~iCl~iL~-------~~W~p~~-~i~~vL~sil~~ll~~Pn~--~~p~n~--~aa~~~~~d~~~y~~~vr~~~~~  153 (171)
T 1yf9_A           86 DERSGSVCLDVIN-------QTWTPMY-QLENIFDVFLPQLLRYPNP--SDPLNV--QAAHLLHADRVGFDALLREHVST  153 (171)
T ss_dssp             CTTTCBBCHHHHH-------HHCCTTC-CTHHHHHTHHHHHHHSCCS--SCCSCH--HHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             cccCCeEeccccc-------cCCCCCC-cHHHHHHHHHHHHHhCCCC--CCcccH--HHHHHHHHCHHHHHHHHHHHHHH
Confidence            9 59999999997       7899998 999999998 899999999  999998  78999999999999999999987


Q ss_pred             HHH--HHHhCCCCCcH
Q 018254          211 SMT--FLLRNPPKNFE  224 (359)
Q Consensus       211 ~m~--~~l~~pp~~Fe  224 (359)
                      ++.  ....+.|++|+
T Consensus       154 ~a~~~~~~~~~p~~~~  169 (171)
T 1yf9_A          154 HATPQKALESIPEAYR  169 (171)
T ss_dssp             HCCHHHHHHTSCGGGC
T ss_pred             HcChhhHhcCCCcccC
Confidence            642  23456777774


No 40 
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00  E-value=8.1e-36  Score=298.49  Aligned_cols=163  Identities=26%  Similarity=0.459  Sum_probs=149.0

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCC
Q 018254           52 AGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPN  131 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPN  131 (359)
                      +.+.|||++|++.|++++|.||++.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+++  |||
T Consensus         2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~--HPn   79 (399)
T 4ddg_A            2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY--HPN   79 (399)
T ss_dssp             HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCC--CTT
T ss_pred             cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeecccc--ccc
Confidence            458999999999999999999999999999999999999999999999999999999999999999999999976  999


Q ss_pred             cCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHHHHHHHHHH
Q 018254          132 LYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNEDVFILSCKS  211 (359)
Q Consensus       132 Vy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~v~~~t~k~  211 (359)
                      |+.+|.|||++|.       +.|+|++ +|.+||++|++||.+|+|  ++|++.  +++.+|.+|+..|+++|+.++.++
T Consensus        80 v~~~G~iCl~il~-------~~W~p~~-~i~~vL~~i~~ll~~pnp--~~p~n~--~aa~~~~~d~~~y~~~~~~~~~~~  147 (399)
T 4ddg_A           80 INSNGSISLDILR-------SQWSPAL-TISKVLLSICSLLCDPNP--DDPLVP--EIARIYKTDREKYNRIAREWTQKY  147 (399)
T ss_dssp             BCTTCBBCCGGGT-------TSCCTTC-CHHHHHHHHHHHHHSCCT--TSCSSH--HHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEeCcccc-------cCCCccc-cHHHHHHHHHHHHcCCCC--CchhhH--HHHHHHHHCHHHHHHHHHHHHHHh
Confidence            9999999999997       7999998 999999999999999999  999998  789999999999999999998875


Q ss_pred             HHHHHhCCCCCcHHHHHHHHHH
Q 018254          212 MTFLLRNPPKNFEGFVRSHFRE  233 (359)
Q Consensus       212 m~~~l~~pp~~Fe~~V~~hf~~  233 (359)
                      +.     ++..+.+.|.+..+.
T Consensus       148 a~-----~~v~~De~i~~q~~~  164 (399)
T 4ddg_A          148 AM-----GGSAYDEAIMAQQDR  164 (399)
T ss_dssp             TS-----CTTHHHHHHHHHHHH
T ss_pred             hc-----cccchhHHHHHHHHH
Confidence            53     445555555554333


No 41 
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=8.2e-36  Score=257.97  Aligned_cols=117  Identities=25%  Similarity=0.494  Sum_probs=110.8

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCC
Q 018254           52 AGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPN  131 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPN  131 (359)
                      +.+.+||++|+++|++++|.||++.+.++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|++ ++|||
T Consensus        19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i-~~HPn   97 (136)
T 2h2y_A           19 GNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKP-PKHTH   97 (136)
T ss_dssp             TSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSC-CCCTT
T ss_pred             hHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCC-CCCCc
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999996 24999


Q ss_pred             cCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCC
Q 018254          132 LYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKP  177 (359)
Q Consensus       132 Vy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~P  177 (359)
                      ||.+|+|||++|+       +.|+|++ +|.+||++||+||.+|+.
T Consensus        98 v~~~G~ICl~iL~-------~~WsP~~-ti~~vL~si~sll~~p~~  135 (136)
T 2h2y_A           98 VYSNGDICLSVLG-------DDYNPSL-SISGLILSIISMLSSAKE  135 (136)
T ss_dssp             BCTTCCBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCEEECcccc-------CCCCCCC-cHHHHHHHHHHHHhCcCc
Confidence            9999999999997       7899998 999999999999988753


No 42 
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00  E-value=5.7e-36  Score=272.52  Aligned_cols=143  Identities=22%  Similarity=0.408  Sum_probs=134.1

Q ss_pred             ChhHHHHHHHHHHHHHhcCCCCeEEE----eecCCcc---eEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecc
Q 018254           51 PAGSHKKIMQEWKILEKHLPESIFVR----VYENRID---LLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRS  123 (359)
Q Consensus        51 ss~a~kRL~kEl~~L~k~~p~gI~v~----~~e~~l~---~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T  123 (359)
                      .+.+.+||++|+++|+  +|.||++.    ++++|++   .|+++|. |++|||+||.|+|+|.||++||++||+|+|.|
T Consensus        27 ~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t  103 (190)
T 3o2u_A           27 LSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLK  103 (190)
T ss_dssp             CCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECS
T ss_pred             ccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEec
Confidence            3678999999999998  78899998    8899999   9999997 88899999999999999999999999999999


Q ss_pred             cccccCCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHcHHHHHHH
Q 018254          124 FGLRLNPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKKSTAYNED  203 (359)
Q Consensus       124 ~i~rfHPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~~~~Yne~  203 (359)
                      +++  |||||.+|+|||++|+       +.|+|.+ +|.+||++|++||.+|+|  ++|+|.  +|+.+|.+|++.|+++
T Consensus       104 ~i~--HPnV~~~G~iCl~iL~-------~~W~p~~-~i~~vL~~i~~ll~~pn~--~~pln~--~aa~~~~~d~~~f~~~  169 (190)
T 3o2u_A          104 KIF--HPNIDLKGNVCLNILR-------EDWSPAL-DLQSIITGLLFLFLEPNP--NDPLNK--DAAKLLCEGEKEFAEA  169 (190)
T ss_dssp             CCC--CTTBCTTSBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHHSCCT--TSCSSH--HHHHHHHTCHHHHHHH
T ss_pred             Ccc--cCCCCCCCeEechhcc-------CCCCCCC-CHHHHHHHHHHHHhCCCC--CcchhH--HHHHHHHHCHHHHHHH
Confidence            976  9999999999999997       8999998 999999999999999999  999998  7899999999999999


Q ss_pred             HHHHHHH
Q 018254          204 VFILSCK  210 (359)
Q Consensus       204 v~~~t~k  210 (359)
                      |+.++..
T Consensus       170 ar~~~~~  176 (190)
T 3o2u_A          170 VRLTMSG  176 (190)
T ss_dssp             HHHHHBT
T ss_pred             HHHHHHh
Confidence            9887643


No 43 
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00  E-value=5.4e-36  Score=255.44  Aligned_cols=116  Identities=27%  Similarity=0.507  Sum_probs=105.7

Q ss_pred             hHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCCc
Q 018254           53 GSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPNL  132 (359)
Q Consensus        53 ~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPNV  132 (359)
                      .+.+||++|+++|++++|.||++.++++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|++ ++||||
T Consensus         6 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i-~~HPnv   84 (125)
T 2fo3_A            6 NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKP-PKHTHV   84 (125)
T ss_dssp             ---CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSC-CCBTTB
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCC-CCCCcC
Confidence            4789999999999999999999999999999999999999999999999999999999999999999999996 249999


Q ss_pred             CCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCC
Q 018254          133 YANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKP  177 (359)
Q Consensus       133 y~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~P  177 (359)
                      |.+|+|||++|+       +.|+|++ +|.+||++||+||.+|++
T Consensus        85 ~~~G~iCl~iL~-------~~W~P~~-~i~~vl~si~~ll~~p~~  121 (125)
T 2fo3_A           85 YSNGDICLSLLG-------DDYNPSL-SISGLVLSIISMLSSAKE  121 (125)
T ss_dssp             CTTSBBCCGGGT-------TTCCTTC-CHHHHHHHHHHHHC----
T ss_pred             CCCCEEEchhcC-------CCCCCCC-cHHHHHHHHHHHHhCccc
Confidence            999999999997       7999998 999999999999998876


No 44 
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00  E-value=5.4e-36  Score=267.11  Aligned_cols=146  Identities=20%  Similarity=0.354  Sum_probs=131.1

Q ss_pred             CCCChhHHHHHHHHHHHHHhcC------------CCCeEEEeecCCcceEEEEEecCCCCCcC--CCeEEEEEeCCCCCC
Q 018254           48 DHFPAGSHKKIMQEWKILEKHL------------PESIFVRVYENRIDLLRAVIVGTAGTPYH--DGLFFFDLAFPADYP  113 (359)
Q Consensus        48 ~~~ss~a~kRL~kEl~~L~k~~------------p~gI~v~~~e~~l~~w~~~I~GP~gTPYe--gG~F~f~I~fP~dYP  113 (359)
                      ..|++.+.|||++|++.|++++            +.+|++.++++|++.|+++|.||+||||+  ||.|+|+|.||++||
T Consensus         3 ~~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP   82 (167)
T 4ds2_A            3 GSMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYP   82 (167)
T ss_dssp             --CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTT
T ss_pred             ccccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCC
Confidence            3566678999999999999987            78999999999999999999999999999  999999999999999


Q ss_pred             CCCCeeeecccccccCCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHH-HHHHHhccCCCCCCCCCCCCchhhhh
Q 018254          114 NHPPMVHYRSFGLRLNPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLV-SIQALVLNEKPYFNEPGHGMWPGRSI  192 (359)
Q Consensus       114 ~~PP~V~f~T~i~rfHPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~-sIq~Ll~~p~Py~neP~~~~~~a~~~  192 (359)
                      ++||+|+|.|+++  |||||.+|+|||++|+       +.|+|++ +|.+||+ .|++|+...+|..++|+|.  +|+.+
T Consensus        83 ~~pP~v~f~t~i~--HPnv~~~G~iCl~il~-------~~W~p~~-~i~~vll~~l~~l~~~~~pn~~~p~n~--eaa~l  150 (167)
T 4ds2_A           83 HEPPTVRFVTPVY--SPLVTGEGGICDRMVN-------DFWTPDQ-HASDVIKLVLDRVFSQYKSRRDDDVNP--EARHY  150 (167)
T ss_dssp             TSCCEEEESSCCC--CSSCCTTSCCCTHHHH-------TTCCTTS-CHHHHHHHHHHHHHTSTTSCCSCCCCH--HHHHH
T ss_pred             CCCCEEEEeCCcc--cccCCCCCEEEcccCc-------CCCCCCC-ChHHHHHHHHHHHHhcCCCCCcchHhH--HHHHH
Confidence            9999999999976  9999999999999997       8999999 8998754 6778887633333999988  78999


Q ss_pred             HHHcHHHHHHHHH
Q 018254          193 WEKKSTAYNEDVF  205 (359)
Q Consensus       193 ~~~~~~~Yne~v~  205 (359)
                      |.+|+++|+++|+
T Consensus       151 ~~~d~~~f~~~vr  163 (167)
T 4ds2_A          151 LEKFPQDFAARVR  163 (167)
T ss_dssp             HHHCHHHHHHHHT
T ss_pred             HHHCHHHHHHHHh
Confidence            9999999999986


No 45 
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00  E-value=3.2e-36  Score=260.88  Aligned_cols=118  Identities=27%  Similarity=0.529  Sum_probs=109.9

Q ss_pred             CCCCChhHHHHHHHHHHHHHhcCCCCeEEE--eecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccc
Q 018254           47 RDHFPAGSHKKIMQEWKILEKHLPESIFVR--VYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSF  124 (359)
Q Consensus        47 ~~~~ss~a~kRL~kEl~~L~k~~p~gI~v~--~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~  124 (359)
                      ...|++. .+||++|+++|++++|+||++.  ++++|++.|+++|.||+||||+||.|+|+|.||++||++||+|+|.|+
T Consensus        17 ~~~Ms~~-~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~   95 (136)
T 2a7l_A           17 RGSMASM-QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGE   95 (136)
T ss_dssp             GGGGTTS-CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESS
T ss_pred             chhccHH-HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCC
Confidence            4445543 4999999999999999999976  889999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhc
Q 018254          125 GLRLNPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVL  173 (359)
Q Consensus       125 i~rfHPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~  173 (359)
                      +++||||||.+|+|||++|+       ++|+|++ +|.+||++||+||.
T Consensus        96 i~~~HPNV~~~G~ICL~iL~-------~~WsP~~-ti~~vL~sI~slL~  136 (136)
T 2a7l_A           96 NIPVHPHVYSNGHICLSILT-------EDWSPAL-SVQSVCLSIISMLS  136 (136)
T ss_dssp             CCCCBTTBCTTCBBCCGGGT-------TTCCTTS-CHHHHHHHHHHHTC
T ss_pred             CcCCCccCCCCCeEEchhcC-------CCCCCCC-cHHHHHHHHHHHhC
Confidence            98899999999999999997       8999999 99999999999983


No 46 
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00  E-value=6.7e-35  Score=258.00  Aligned_cols=135  Identities=17%  Similarity=0.307  Sum_probs=119.7

Q ss_pred             CCCCChhHHHHHHHHHHHHHhc-CCCCeEEEeec-C--CcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeec
Q 018254           47 RDHFPAGSHKKIMQEWKILEKH-LPESIFVRVYE-N--RIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYR  122 (359)
Q Consensus        47 ~~~~ss~a~kRL~kEl~~L~k~-~p~gI~v~~~e-~--~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~  122 (359)
                      .......+.+||++|++.|+++ ++.||++.+.. +  |++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.
T Consensus        15 ~~~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~   94 (156)
T 2q0v_A           15 YFQGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFD   94 (156)
T ss_dssp             CCSSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred             CCcccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEE
Confidence            3344566899999999999998 78899999843 3  599999999999999999999999999999999999999999


Q ss_pred             ccccccCCCcCCCCce---eeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCCchhhhhHHHc
Q 018254          123 SFGLRLNPNLYANGRV---CLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGMWPGRSIWEKK  196 (359)
Q Consensus       123 T~i~rfHPNVy~~GkV---CLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~~~a~~~~~~~  196 (359)
                      |+++  |||||.+|+|   ||++|+        .|+|++ +|.+||++||+||.+|++  ++|.+.  +|+.+|.+|
T Consensus        95 t~i~--HPNV~~~G~icisCL~iL~--------~WsP~~-ti~~vL~sI~~ll~~Pn~--~~p~n~--~aa~~y~~n  156 (156)
T 2q0v_A           95 TKIE--MSCVDNCGRVIKNNLHILK--------NWNRNY-TIETILISLRQEMLSSAN--KRLPQP--NEGEVYSNN  156 (156)
T ss_dssp             BCCC--CTTBCTTSBBCGGGSHHHH--------TCCTTC-CHHHHHHHHHHHTTSTTT--TTCCCC--CTTCBC---
T ss_pred             cccc--cCCCccCCeEehhhccccc--------CCCCcC-cHHHHHHHHHHHHhCCCC--CCcCCh--HHHHHhhhC
Confidence            9986  9999999999   899996        499998 999999999999999999  999998  567777653


No 47 
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00  E-value=2.5e-34  Score=261.07  Aligned_cols=119  Identities=24%  Similarity=0.475  Sum_probs=104.3

Q ss_pred             ChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCC
Q 018254           51 PAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNP  130 (359)
Q Consensus        51 ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHP  130 (359)
                      ++.+.+||++|++.|++++|.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+    ||
T Consensus        12 ~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~----~~   87 (187)
T 2f4w_A           12 PTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP----NG   87 (187)
T ss_dssp             --CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC----CS
T ss_pred             ccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC----Cc
Confidence            45689999999999999999999999999999999999999999999999999999999999999999999998    99


Q ss_pred             CcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCC
Q 018254          131 NLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPY  178 (359)
Q Consensus       131 NVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py  178 (359)
                      |++.+|+|||++|++|    .+.|+|++ +|.+||++|++||.+|+|.
T Consensus        88 ~~~~~G~ICL~iL~~~----~~~W~P~~-ti~~vL~si~sll~~p~p~  130 (187)
T 2f4w_A           88 RFKCNTRLCLSITDFH----PDTWNPAW-SVSTILTGLLSFMVEKGPT  130 (187)
T ss_dssp             SBCTTSCBC--------------CCTTC-CHHHHHHHHHHHHHSCCCC
T ss_pred             eeccCCeEeeeccccC----ccCCCCcC-cHHHHHHHHHHHhcCCCCC
Confidence            9999999999999754    37899998 9999999999999999983


No 48 
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00  E-value=2.1e-34  Score=255.87  Aligned_cols=127  Identities=17%  Similarity=0.304  Sum_probs=115.5

Q ss_pred             CChhHHHHHHHHHHHHHhcCCCC-eEEEe-ecCC--cceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccc
Q 018254           50 FPAGSHKKIMQEWKILEKHLPES-IFVRV-YENR--IDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFG  125 (359)
Q Consensus        50 ~ss~a~kRL~kEl~~L~k~~p~g-I~v~~-~e~~--l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i  125 (359)
                      +...+.+||++|+++|++++++| +.+.+ +++|  ++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|++
T Consensus        22 v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i  101 (160)
T 2a4d_A           22 VKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI  101 (160)
T ss_dssp             CCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCC
T ss_pred             eechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCc
Confidence            44668999999999999999998 67776 5665  88999999999999999999999999999999999999999998


Q ss_pred             cccCCCcC-CCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhc-cCCCCCCCCCCCC
Q 018254          126 LRLNPNLY-ANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVL-NEKPYFNEPGHGM  186 (359)
Q Consensus       126 ~rfHPNVy-~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~-~p~Py~neP~~~~  186 (359)
                      +  ||||| .+|+|||++|++|     +.|+|++ +|.+||++||+||. .|++  ++|.+.+
T Consensus       102 ~--HPNV~~~~G~ICl~iL~~~-----~~WsP~~-ti~~vL~sI~~ll~~~pn~--~~P~n~e  154 (160)
T 2a4d_A          102 N--MNGVNSSNGVVDPRAISVL-----AKWQNSY-SIKVVLQELRRLMMSKENM--KLPQPPE  154 (160)
T ss_dssp             C--CTTBCTTTCBBCGGGSHHH-----HTCCTTC-CHHHHHHHHHHHHTSTTTT--TCCCCCT
T ss_pred             e--eCCEECCCCEEehhhcCCc-----cCCCccC-cHHHHHHHHHHHHccCCCC--CCCCChh
Confidence            6  99999 7999999999765     6899998 99999999999995 5888  9999983


No 49 
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00  E-value=1.8e-34  Score=258.55  Aligned_cols=148  Identities=16%  Similarity=0.263  Sum_probs=127.4

Q ss_pred             eeeCCCCCCccccccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCC-eEEEe-ecCC--cceEEEEEecCCCCCcCCCe
Q 018254           26 DVVSDVSDHHYITSSFTKKNGRDHFPAGSHKKIMQEWKILEKHLPES-IFVRV-YENR--IDLLRAVIVGTAGTPYHDGL  101 (359)
Q Consensus        26 ~~v~~~~dh~y~~~~~~~~~~~~~~ss~a~kRL~kEl~~L~k~~p~g-I~v~~-~e~~--l~~w~~~I~GP~gTPYegG~  101 (359)
                      +++++.+|||+........   ......+.+||++|++.|++++++| +.+.+ +++|  ++.|+++|.||++|||+||+
T Consensus        11 ~~~s~~~~~~~~~p~~~~~---~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~   87 (170)
T 2hlw_A           11 KSQSKLSDEGRLEPRKFHC---KGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRI   87 (170)
T ss_dssp             CCSCSSSCSSCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCC
T ss_pred             ccccccccccccCCccccC---CcccCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcE
Confidence            4557888999986643221   1133557899999999999999998 56776 5665  89999999999999999999


Q ss_pred             EEEEEeCCCCCCCCCCeeeecccccccCCCcC-CCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhcc-CCCCC
Q 018254          102 FFFDLAFPADYPNHPPMVHYRSFGLRLNPNLY-ANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLN-EKPYF  179 (359)
Q Consensus       102 F~f~I~fP~dYP~~PP~V~f~T~i~rfHPNVy-~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~-p~Py~  179 (359)
                      |+|+|.||++||++||+|+|.|+++  ||||| .+|+|||++|++|     +.|+|++ +|.+||++||+||.+ |++  
T Consensus        88 f~l~i~fp~~YP~~PP~v~F~T~i~--HPNV~~~~G~ICl~iL~~~-----~~WsP~~-ti~~vL~sI~~ll~~~pn~--  157 (170)
T 2hlw_A           88 YSLKIECGPKYPEAPPFVRFVTKIN--MNGVNSSNGVVDPRAISVL-----AKWQNSY-SIKVVLQELRRLMMSKENM--  157 (170)
T ss_dssp             BCEEEECCSSCTTSCCEEEECBCCC--CSSBCSSSCBBCTTTCHHH-----HTCCSSC-CHHHHHHHHHHHHHSTTTS--
T ss_pred             EEEEEECCCCCCCCCCeeEEecccc--cCCEeCCCCEEEhhhcCCC-----CCCCccC-cHHHHHHHHHHHHccCCCC--
Confidence            9999999999999999999999986  99999 8999999999765     6899998 999999999999975 788  


Q ss_pred             CCCCCCC
Q 018254          180 NEPGHGM  186 (359)
Q Consensus       180 neP~~~~  186 (359)
                      ++|.+.+
T Consensus       158 ~~P~n~e  164 (170)
T 2hlw_A          158 KLPQPPE  164 (170)
T ss_dssp             SSCCCSS
T ss_pred             CCCCCcc
Confidence            9999983


No 50 
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00  E-value=2.5e-34  Score=261.01  Aligned_cols=150  Identities=17%  Similarity=0.332  Sum_probs=126.2

Q ss_pred             CCCCCCCCChhHHHHHHHHHHHHHhcC---CCCeEEEeecCCcceEEEEEecC-CCCCcCC-----------CeEEEEEe
Q 018254           43 KKNGRDHFPAGSHKKIMQEWKILEKHL---PESIFVRVYENRIDLLRAVIVGT-AGTPYHD-----------GLFFFDLA  107 (359)
Q Consensus        43 ~~~~~~~~ss~a~kRL~kEl~~L~k~~---p~gI~v~~~e~~l~~w~~~I~GP-~gTPYeg-----------G~F~f~I~  107 (359)
                      ...+...++..+.+||++|+++|++++   +.+|.+.+.++|++.|+++|.|| ++|||+|           |.|.|+|.
T Consensus        17 ~~~g~~~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~   96 (186)
T 1zuo_A           17 RGSGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFS   96 (186)
T ss_dssp             -------CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred             ccCCcccccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEE
Confidence            344566778889999999999999988   68999999999999999999998 9999998           89999999


Q ss_pred             CCCCCCCCCCeeeecccccccCC-CcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCC
Q 018254          108 FPADYPNHPPMVHYRSFGLRLNP-NLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGM  186 (359)
Q Consensus       108 fP~dYP~~PP~V~f~T~i~rfHP-NVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~  186 (359)
                      ||++||++||+|+|.|+++  || |||.+|.|||++|.      .+.|+|++ +|.+||++|++||.+|++         
T Consensus        97 fp~~YP~~PP~V~f~tpi~--hPnnV~~~G~ICL~iL~------~~~WsP~~-ti~~VL~sI~slL~~p~a---------  158 (186)
T 1zuo_A           97 FKDNFPFDPPFVRVVLPVL--SGGYVLGGGALCMELLT------KQGWSSAY-SIESVIMQINATLVKGKA---------  158 (186)
T ss_dssp             CCTTTTSSCCEEEEEESCE--ESTTBCGGGBBCCGGGS------TTTCCTTS-CHHHHHHHHHHHHHHTTC---------
T ss_pred             CCCCCCCCCCeEEEeCCcc--CCCccCCCCcEEeccCC------CCCCCCcC-cHHHHHHHHHHHHcCCCh---------
Confidence            9999999999999999976  99 69999999999996      37899998 999999999999998865         


Q ss_pred             chhhhhHHHcHHHHHHHHHHHHHHHHH
Q 018254          187 WPGRSIWEKKSTAYNEDVFILSCKSMT  213 (359)
Q Consensus       187 ~~a~~~~~~~~~~Yne~v~~~t~k~m~  213 (359)
                         ...+..+..+|.+.++..+.+.+.
T Consensus       159 ---~~~~~~~~~~Y~~~~~~~~~~~~~  182 (186)
T 1zuo_A          159 ---RVQFGANKNQYNLARAQQSYNSIV  182 (186)
T ss_dssp             ---EECTTCCTTCCCHHHHHHHHHHHH
T ss_pred             ---hHhhccCHHHHhHHHHHHHHHHHH
Confidence               222334456787777776666554


No 51 
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00  E-value=9.2e-34  Score=245.45  Aligned_cols=121  Identities=17%  Similarity=0.280  Sum_probs=109.7

Q ss_pred             hHHHHHHHHHHHHHhc-CCCCeEEEeec-C--CcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccccccc
Q 018254           53 GSHKKIMQEWKILEKH-LPESIFVRVYE-N--RIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRL  128 (359)
Q Consensus        53 ~a~kRL~kEl~~L~k~-~p~gI~v~~~e-~--~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rf  128 (359)
                      .+.+||++|+++|+++ ++.||++.+.+ +  |++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+++  
T Consensus         6 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~--   83 (138)
T 1jat_B            6 PRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKIN--   83 (138)
T ss_dssp             CHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC--
T ss_pred             HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccc--
Confidence            4679999999999998 78899999843 4  4899999999999999999999999999999999999999999987  


Q ss_pred             CCCcCCC-Cce--eeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCCCCCCCCCC
Q 018254          129 NPNLYAN-GRV--CLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPYFNEPGHGM  186 (359)
Q Consensus       129 HPNVy~~-GkV--CLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py~neP~~~~  186 (359)
                      |||||.+ |+|  ||++|+        .|+|++ +|.+||++||+||.+|++  ++|.+..
T Consensus        84 HPnv~~~~G~i~~cL~~l~--------~W~p~~-~i~~vl~~i~~ll~~pn~--~~p~~~~  133 (138)
T 1jat_B           84 LPCVNPTTGEVQTDFHTLR--------DWKRAY-TMETLLLDLRKEMATPAN--KKLRQPK  133 (138)
T ss_dssp             CTTBCTTTCBBCTTSHHHH--------TCCTTC-CHHHHHHHHHHHHTSHHH--HTSCCCC
T ss_pred             cCCEeCCCCEEeeecccCC--------CCCCcC-cHHHHHHHHHHHHcCCCC--CCCCCcc
Confidence            9999976 999  999994        699998 999999999999999999  9999873


No 52 
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.89  E-value=5.4e-24  Score=188.98  Aligned_cols=102  Identities=18%  Similarity=0.368  Sum_probs=91.8

Q ss_pred             ChhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCC----------eEEEEEeCCCCCCCCCCeee
Q 018254           51 PAGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDG----------LFFFDLAFPADYPNHPPMVH  120 (359)
Q Consensus        51 ss~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG----------~F~f~I~fP~dYP~~PP~V~  120 (359)
                      ...|.+||++|++.|++      ++.+..+++..|.++|.||+||||+||          .|.+.|.||.+||.+||+|+
T Consensus        30 ~~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~  103 (172)
T 2z6o_A           30 RELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIA  103 (172)
T ss_dssp             THHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred             cHHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeee
Confidence            35689999999999998      467778899999999999999999999          99999999999999999999


Q ss_pred             eccc-ccccCCCcCCCCceeeccccc--cCCCCCCCcccCcccHHHHHH
Q 018254          121 YRSF-GLRLNPNLYANGRVCLSLLNT--WTGKKSEKWNPDESTVLQVLV  166 (359)
Q Consensus       121 f~T~-i~rfHPNVy~~GkVCLslL~t--w~G~~~e~WsP~~stI~qVL~  166 (359)
                      |.+. ++  |||+|.+|+|||++|..  |     ..|+|.+ +|.++|.
T Consensus       104 F~~~~~~--hpnmY~~G~ICLdIL~kp~W-----s~~~P~~-~IahiL~  144 (172)
T 2z6o_A          104 VPELDGK--TAKMYRGGKICLTDHFKPLW-----ARNVPKF-GLAHLMA  144 (172)
T ss_dssp             CGGGTTT--CSSBCTTSBBCCCTTHHHHH-----HHHTTSC-CHHHHHH
T ss_pred             eCCCCCC--CCCCCCCCcEechhhccccc-----cccCCcc-CHHHHHh
Confidence            9998 65  99999999999999942  3     3566999 9999874


No 53 
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.64  E-value=5e-16  Score=138.01  Aligned_cols=115  Identities=18%  Similarity=0.271  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHhcCC---CCeEEEeecCCcceEEEEEecCCCCCcCCCe---EEEEEeCCCCCCCCCCeeeeccc---c
Q 018254           55 HKKIMQEWKILEKHLP---ESIFVRVYENRIDLLRAVIVGTAGTPYHDGL---FFFDLAFPADYPNHPPMVHYRSF---G  125 (359)
Q Consensus        55 ~kRL~kEl~~L~k~~p---~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~---F~f~I~fP~dYP~~PP~V~f~T~---i  125 (359)
                      .+|..+|+..+.+.-|   ....+...++....+-..+.|+-.++|+||.   |.+.|.||.+||++||.|.|.+.   +
T Consensus        30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m  109 (162)
T 3r3q_A           30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM  109 (162)
T ss_dssp             HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred             hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence            3566778877766555   2344455667677778888888889999999   88999999999999999988651   0


Q ss_pred             ------cccCCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCC
Q 018254          126 ------LRLNPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKP  177 (359)
Q Consensus       126 ------~rfHPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~P  177 (359)
                            ...||||+.+|+||+++|.        .|+|..|+|.+||.+|+++|.+|+|
T Consensus       110 ~~~~~~I~~hpnVD~~G~I~lpyL~--------~W~p~~s~L~~ll~~l~~lf~ep~~  159 (162)
T 3r3q_A          110 NTISSSLPIQEYIDSNGWIALPILH--------AWDPAAMNLIMVVQELMSLLHEPPQ  159 (162)
T ss_dssp             TTSCTTSTHHHHBCTTSBBCCGGGG--------SCCGGGCCHHHHHHHHHHTTSCCCC
T ss_pred             cccccccCCCCCCCCCCcEeCcccc--------cCCCCcCcHHHHHHHHHHHhcCCCC
Confidence                  1249999999999999995        6999666999999999999999988


No 54 
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.64  E-value=5.1e-17  Score=141.73  Aligned_cols=84  Identities=18%  Similarity=0.387  Sum_probs=75.0

Q ss_pred             hhHHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCC----------eEEEEEeCCCCCCCCCCeeee
Q 018254           52 AGSHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDG----------LFFFDLAFPADYPNHPPMVHY  121 (359)
Q Consensus        52 s~a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG----------~F~f~I~fP~dYP~~PP~V~f  121 (359)
                      ..|..||..|+..|.+      ||....++-..|.+++.||+||+|.|+          .|.+.|.||.+||..||.|.|
T Consensus        33 ~~w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~F  106 (168)
T 3kpa_A           33 DKWTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIAL  106 (168)
T ss_dssp             HHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred             HHHHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeec
Confidence            5699999999999866      444455566789999999999999999          899999999999999999999


Q ss_pred             ccc-ccccCCCcCCCCceeeccc
Q 018254          122 RSF-GLRLNPNLYANGRVCLSLL  143 (359)
Q Consensus       122 ~T~-i~rfHPNVy~~GkVCLslL  143 (359)
                      .+. ++  |||+|.+|+|||+++
T Consensus       107 p~ldgk--t~kmYr~GkICLdIh  127 (168)
T 3kpa_A          107 PELEGK--TVKMYRGGKICMTTH  127 (168)
T ss_dssp             GGGTTT--CSSEETTTEECCCTT
T ss_pred             ccccCc--CccccCCCcEEeccc
Confidence            996 55  999999999999886


No 55 
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.34  E-value=3.4e-12  Score=111.61  Aligned_cols=107  Identities=20%  Similarity=0.379  Sum_probs=82.7

Q ss_pred             HHHHHHHHhcCCC-CeEEEee---cCCcceEEEEEecCCCCCcCCCeEEE--EEeCCCCCCCCCCeeeeccc----cccc
Q 018254           59 MQEWKILEKHLPE-SIFVRVY---ENRIDLLRAVIVGTAGTPYHDGLFFF--DLAFPADYPNHPPMVHYRSF----GLRL  128 (359)
Q Consensus        59 ~kEl~~L~k~~p~-gI~v~~~---e~~l~~w~~~I~GP~gTPYegG~F~f--~I~fP~dYP~~PP~V~f~T~----i~rf  128 (359)
                      .+|...+.+.-|. .......   ..++..|.++|.    .+|+|+.|.+  .|.||.+||+.||.| |.++    ..+.
T Consensus        26 ~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~  100 (146)
T 3obq_A           26 VRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKT  100 (146)
T ss_dssp             HHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECC
T ss_pred             HHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECC
Confidence            4566666665553 1112222   256888899997    7899999985  999999999999999 5554    1246


Q ss_pred             CCCcCCCCceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhccCCCC
Q 018254          129 NPNLYANGRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLNEKPY  178 (359)
Q Consensus       129 HPNVy~~GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~p~Py  178 (359)
                      ||||+.+|+||++.|.        +|++..|+|.++|.+++.+|...-|.
T Consensus       101 ~~~Vd~~G~i~lpyL~--------~W~~~~snL~~ll~~l~~~F~~epPv  142 (146)
T 3obq_A          101 GKHVDANGKIYLPYLH--------EWKHPQSDLLGLIQVMIVVFGDEPPV  142 (146)
T ss_dssp             BTTBCTTCBBCCHHHH--------TCCTTTCCHHHHHHHHHHHHHHSCSE
T ss_pred             CCCCCCCCCEeccccc--------ccCCCCCCHHHHHHHHHHHHhhCCCC
Confidence            9999999999999996        48886679999999999999876553


No 56 
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.23  E-value=0.11  Score=42.95  Aligned_cols=68  Identities=18%  Similarity=0.255  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecc
Q 018254           54 SHKKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRS  123 (359)
Q Consensus        54 a~kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T  123 (359)
                      ...+...|+..|+.-.++.+.+.  ......+++.|..-.+..-+.-.+.+.|.||++||..||.+...+
T Consensus        11 ~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~   78 (128)
T 2ebm_A           11 YGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS   78 (128)
T ss_dssp             HHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred             hHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence            45667889999988777665442  222345555554222222233478899999999999999998755


No 57 
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=93.95  E-value=0.26  Score=40.59  Aligned_cols=68  Identities=19%  Similarity=0.193  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHhcCCCCeEEEeecCC--cceEEEEEecCCCCCcC--CCeEEEEEeCCCCCCCCCCeeeeccc
Q 018254           57 KIMQEWKILEKHLPESIFVRVYENR--IDLLRAVIVGTAGTPYH--DGLFFFDLAFPADYPNHPPMVHYRSF  124 (359)
Q Consensus        57 RL~kEl~~L~k~~p~gI~v~~~e~~--l~~w~~~I~GP~gTPYe--gG~F~f~I~fP~dYP~~PP~V~f~T~  124 (359)
                      ....|+..|+.-.++.+.+.....+  ...+.+.|..+.+..-+  .-.+.+.|.||++||..||.+...+.
T Consensus        12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~   83 (128)
T 2day_A           12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP   83 (128)
T ss_dssp             HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred             HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence            4678999998877776665432222  23344455422221111  24678899999999999999987764


No 58 
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=92.57  E-value=0.46  Score=39.62  Aligned_cols=69  Identities=7%  Similarity=0.105  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEeec-------CCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeeccc
Q 018254           54 SHKKIMQEWKILEKHLPESIFVRVYE-------NRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSF  124 (359)
Q Consensus        54 a~kRL~kEl~~L~k~~p~gI~v~~~e-------~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~  124 (359)
                      ...+-..|+..|+.-.++.+.+. ..       +....+.+.|....+ +-..-.+.+.|.+|++||..||.|...+.
T Consensus        11 ~~e~q~~EleaL~SIY~d~~~~~-~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~   86 (138)
T 2yz0_A           11 YYEIQCNELEAIRSIYMDDFTDL-TKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV   86 (138)
T ss_dssp             HHHHHHHHHHHHHTTSSSSEECC-STTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred             hHHHHHHHHHHHHHHChhhheec-ccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence            34556788888887666554322 21       123456666663322 11234778999999999999999987653


No 59 
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.86  E-value=0.39  Score=39.55  Aligned_cols=66  Identities=18%  Similarity=0.174  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHhcCCC--CeEEEe-ecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecc
Q 018254           57 KIMQEWKILEKHLPE--SIFVRV-YENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRS  123 (359)
Q Consensus        57 RL~kEl~~L~k~~p~--gI~v~~-~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T  123 (359)
                      ....|+..|+.-.++  .+.+.- ...+...+++.|.. .+..=..-.+.+.|.||++||..||.+...+
T Consensus        11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~   79 (128)
T 2ebk_A           11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISINS   79 (128)
T ss_dssp             HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred             HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence            456789888775543  443211 11223466666653 2210012368899999999999999987654


No 60 
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=90.56  E-value=1.6  Score=36.03  Aligned_cols=70  Identities=13%  Similarity=0.124  Sum_probs=44.0

Q ss_pred             hHHHHHHHHHHHHHhcCCCCeEEEeecC-----CcceEEEEEecCCC-C-CcCCCeEEEEEeCCCCCCCCCCeeeecc
Q 018254           53 GSHKKIMQEWKILEKHLPESIFVRVYEN-----RIDLLRAVIVGTAG-T-PYHDGLFFFDLAFPADYPNHPPMVHYRS  123 (359)
Q Consensus        53 ~a~kRL~kEl~~L~k~~p~gI~v~~~e~-----~l~~w~~~I~GP~g-T-PYegG~F~f~I~fP~dYP~~PP~V~f~T  123 (359)
                      ....+...|+..|+.-.++.+.+.....     .....++.|. |.+ . .-..-.+.+.|.||++||..||.|...+
T Consensus        10 ~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~   86 (137)
T 1ukx_A           10 SYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN   86 (137)
T ss_dssp             CHHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred             chHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence            3456778999999887776654422111     1234455554 222 1 0012468899999999999999998743


No 61 
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=85.17  E-value=6.2  Score=35.31  Aligned_cols=85  Identities=12%  Similarity=0.204  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHhcCCCCeEEEeecCCcceEEEEEecCCCCCcCCCeEEEEEeCCCCCCCCCCeeeecccccccCCCcCCC
Q 018254           56 KKIMQEWKILEKHLPESIFVRVYENRIDLLRAVIVGTAGTPYHDGLFFFDLAFPADYPNHPPMVHYRSFGLRLNPNLYAN  135 (359)
Q Consensus        56 kRL~kEl~~L~k~~p~gI~v~~~e~~l~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~~PP~V~f~T~i~rfHPNVy~~  135 (359)
                      .+|.+|+..|-=+.     +.-...++...++.+....     |-...+.|.++.+||.+||.+.-.-|.- |  +    
T Consensus         4 ~~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~~-~--~----   66 (186)
T 3zqs_A            4 SSLIEEIGTLGWDK-----LVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPVP-F--C----   66 (186)
T ss_dssp             CSHHHHHHHHCGGG-----EEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSSC-C--C----
T ss_pred             HHHHHHHHHhCCce-----eeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCCC-c--c----
Confidence            46888998873221     2223456788888887543     5678899999999999999987766631 1  1    


Q ss_pred             CceeeccccccCCCCCCCcccCcccHHHHHHHHHHHhcc
Q 018254          136 GRVCLSLLNTWTGKKSEKWNPDESTVLQVLVSIQALVLN  174 (359)
Q Consensus       136 GkVCLslL~tw~G~~~e~WsP~~stI~qVL~sIq~Ll~~  174 (359)
                                      -.|+|.. ++..++...+..+..
T Consensus        67 ----------------~~w~~~s-sL~~v~~qF~~~Le~   88 (186)
T 3zqs_A           67 ----------------ASWTPQS-SLISIYSQFLAAIES   88 (186)
T ss_dssp             ----------------CCCCTTC-CHHHHHHHHHHHHHH
T ss_pred             ----------------cccCCCc-cHHHHHHHHHHHHHH
Confidence                            3688874 898888888877753


No 62 
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=83.89  E-value=3.4  Score=35.26  Aligned_cols=68  Identities=15%  Similarity=0.109  Sum_probs=41.8

Q ss_pred             hHHHHHHHHHHHHHhcCC--CCeEEEeec-------------CC-c--ceEEEEEecCCCCCcCCCeEEEEEeCCCCCCC
Q 018254           53 GSHKKIMQEWKILEKHLP--ESIFVRVYE-------------NR-I--DLLRAVIVGTAGTPYHDGLFFFDLAFPADYPN  114 (359)
Q Consensus        53 ~a~kRL~kEl~~L~k~~p--~gI~v~~~e-------------~~-l--~~w~~~I~GP~gTPYegG~F~f~I~fP~dYP~  114 (359)
                      ....+-..|+..|+.-.|  +-+.+.-..             .+ .  ..+++.|.- .+ +  ...+.+.|.+|.+||.
T Consensus        14 ~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~-~~-~--~~~i~L~v~lP~~YP~   89 (154)
T 2daw_A           14 ESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQI-EE-P--KVKIDLQVTMPHSYPY   89 (154)
T ss_dssp             HHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEE-TT-T--TEEEEEEEEECSSTTS
T ss_pred             hhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEec-CC-C--CceEEEEEEcCCCCCC
Confidence            345566778888887666  555442100             01 1  234433332 11 1  1378999999999999


Q ss_pred             CCCeeeeccc
Q 018254          115 HPPMVHYRSF  124 (359)
Q Consensus       115 ~PP~V~f~T~  124 (359)
                      .||.+...+.
T Consensus        90 ~~P~i~l~~~   99 (154)
T 2daw_A           90 LALQLFGRSS   99 (154)
T ss_dssp             SCCEEEEECS
T ss_pred             CCCcEEEEeC
Confidence            9999986654


No 63 
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=78.71  E-value=1.1  Score=38.12  Aligned_cols=24  Identities=29%  Similarity=0.546  Sum_probs=20.9

Q ss_pred             eEEEEEeCCCCCCCCCCeeeeccc
Q 018254          101 LFFFDLAFPADYPNHPPMVHYRSF  124 (359)
Q Consensus       101 ~F~f~I~fP~dYP~~PP~V~f~T~  124 (359)
                      .+.+.|.+|.+||..||.+...+.
T Consensus        74 ~l~L~v~lP~~YP~~~P~i~l~~~   97 (152)
T 2dax_A           74 MFSLACILPFKYPAVLPEITVRSV   97 (152)
T ss_dssp             EEEEEEEECSSTTSSCCCCEEECT
T ss_pred             eEEEEEECCCCCCCCCCeEEEEcc
Confidence            578899999999999999987664


No 64 
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=25.56  E-value=39  Score=20.28  Aligned_cols=20  Identities=10%  Similarity=0.308  Sum_probs=17.5

Q ss_pred             HHHHHHHHHHHHHhcCCCCe
Q 018254           54 SHKKIMQEWKILEKHLPESI   73 (359)
Q Consensus        54 a~kRL~kEl~~L~k~~p~gI   73 (359)
                      -+.||.-|+...+.++|.|.
T Consensus         6 eldrlllelnavqhnppsg~   25 (26)
T 3u3c_B            6 ELDRLLLELNAVQHNPPSGX   25 (26)
T ss_pred             HHHHHHHHHhhhccCCCCCC
Confidence            57899999999999999874


No 65 
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=21.02  E-value=67  Score=28.87  Aligned_cols=27  Identities=22%  Similarity=0.495  Sum_probs=23.5

Q ss_pred             CCCeEEEEEeCCCCCCC-----CCCeeeeccc
Q 018254           98 HDGLFFFDLAFPADYPN-----HPPMVHYRSF  124 (359)
Q Consensus        98 egG~F~f~I~fP~dYP~-----~PP~V~f~T~  124 (359)
                      +.|.|.|.-.+|--||.     .||.|+|.-.
T Consensus       109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V~  140 (209)
T 2bum_A          109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLIIF  140 (209)
T ss_dssp             TTCCEEEEEECCCCCBCSTTCBCCCCEEEEEE
T ss_pred             CCcEEEEEEEccCcccCCCCCccCcEEEEEEE
Confidence            36999999999999998     8999988753


Done!