Query 018256
Match_columns 359
No_of_seqs 135 out of 1632
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 07:27:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018256.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018256hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 1.2E-40 2.7E-45 312.2 32.6 337 1-350 10-357 (358)
2 PRK11272 putative DMT superfam 100.0 1.5E-32 3.3E-37 253.1 29.6 278 6-319 10-289 (292)
3 PRK10532 threonine and homoser 100.0 2.7E-32 5.9E-37 251.5 28.9 281 2-324 10-290 (293)
4 PRK11453 O-acetylserine/cystei 100.0 9.6E-32 2.1E-36 248.6 30.3 280 4-318 4-290 (299)
5 PRK11689 aromatic amino acid e 100.0 2.8E-32 6E-37 251.6 25.9 284 2-318 2-290 (295)
6 PRK15430 putative chlorampheni 100.0 1.4E-30 3.1E-35 240.3 26.4 277 2-316 6-286 (296)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 3.1E-30 6.8E-35 233.9 26.5 257 16-310 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 2.5E-29 5.4E-34 233.0 27.4 273 19-321 17-299 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 5.4E-27 1.2E-31 215.0 27.2 276 5-312 2-280 (281)
10 PTZ00343 triose or hexose phos 100.0 2.5E-26 5.4E-31 216.3 27.6 280 6-316 51-349 (350)
11 PF06027 DUF914: Eukaryotic pr 100.0 1.2E-25 2.6E-30 206.8 29.4 295 8-323 17-313 (334)
12 TIGR00688 rarD rarD protein. T 99.9 1.1E-25 2.5E-30 203.6 24.7 249 4-290 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 2.4E-23 5.2E-28 191.2 29.0 279 3-316 6-288 (292)
14 COG5006 rhtA Threonine/homoser 99.9 1.5E-23 3.2E-28 179.2 23.4 275 5-321 13-288 (292)
15 COG2962 RarD Predicted permeas 99.9 6.3E-22 1.4E-26 173.8 25.1 280 3-319 6-287 (293)
16 KOG4510 Permease of the drug/m 99.9 1.1E-24 2.4E-29 187.2 2.1 291 6-320 40-330 (346)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 2.4E-21 5.2E-26 177.9 22.9 275 5-316 2-289 (290)
18 KOG2765 Predicted membrane pro 99.8 1.4E-18 3E-23 156.8 19.0 233 72-323 162-398 (416)
19 PF08449 UAA: UAA transporter 99.8 3.1E-17 6.7E-22 152.0 27.4 267 33-321 32-303 (303)
20 KOG1441 Glucose-6-phosphate/ph 99.7 3.8E-17 8.3E-22 148.8 13.3 275 20-323 33-315 (316)
21 COG2510 Predicted membrane pro 99.7 8.7E-16 1.9E-20 118.2 10.7 135 4-145 3-137 (140)
22 KOG1580 UDP-galactose transpor 99.6 1.7E-14 3.8E-19 122.4 18.3 262 33-319 53-317 (337)
23 KOG1443 Predicted integral mem 99.6 1.4E-13 3.1E-18 121.4 21.3 253 33-313 45-313 (349)
24 KOG1444 Nucleotide-sugar trans 99.6 5.2E-13 1.1E-17 119.4 24.8 288 5-324 13-309 (314)
25 KOG2766 Predicted membrane pro 99.6 2.2E-15 4.9E-20 129.3 5.2 250 32-314 47-298 (336)
26 COG2510 Predicted membrane pro 99.6 1E-13 2.2E-18 106.9 13.4 136 177-315 4-139 (140)
27 KOG2234 Predicted UDP-galactos 99.5 1.7E-11 3.7E-16 111.4 28.7 298 6-320 17-327 (345)
28 PF00892 EamA: EamA-like trans 99.5 7.6E-14 1.6E-18 111.6 9.2 123 14-145 1-124 (126)
29 PF04142 Nuc_sug_transp: Nucle 99.5 3.2E-12 7E-17 114.0 18.0 230 65-306 13-244 (244)
30 PF00892 EamA: EamA-like trans 99.4 4.9E-13 1.1E-17 106.8 8.8 125 186-314 1-125 (126)
31 KOG3912 Predicted integral mem 99.3 5E-10 1.1E-14 97.9 17.9 277 15-314 14-333 (372)
32 KOG1581 UDP-galactose transpor 99.3 3.3E-10 7.3E-15 100.4 16.7 269 32-323 50-321 (327)
33 TIGR00950 2A78 Carboxylate/Ami 99.2 2.6E-10 5.6E-15 103.2 14.8 130 3-142 127-259 (260)
34 PF06800 Sugar_transport: Suga 99.2 5E-09 1.1E-13 93.4 20.9 251 32-312 11-268 (269)
35 COG5070 VRG4 Nucleotide-sugar 99.2 3.4E-10 7.3E-15 95.8 11.4 279 19-325 21-306 (309)
36 PF13536 EmrE: Multidrug resis 99.1 1.4E-10 3E-15 91.3 7.4 104 38-148 2-107 (113)
37 KOG1442 GDP-fucose transporter 99.1 2.4E-10 5.1E-15 99.7 7.9 279 21-324 45-336 (347)
38 PRK15430 putative chlorampheni 99.1 1.9E-09 4.1E-14 99.7 13.7 140 172-315 4-145 (296)
39 PF03151 TPT: Triose-phosphate 99.1 1.9E-09 4E-14 89.5 11.9 138 177-315 1-153 (153)
40 PLN00411 nodulin MtN21 family 99.0 7.8E-09 1.7E-13 97.5 16.4 138 5-149 190-330 (358)
41 TIGR03340 phn_DUF6 phosphonate 99.0 5.3E-09 1.2E-13 95.9 14.6 134 178-316 3-136 (281)
42 PRK10532 threonine and homoser 99.0 1.1E-08 2.4E-13 94.4 15.8 134 4-148 148-282 (293)
43 PRK11272 putative DMT superfam 99.0 9.8E-09 2.1E-13 94.7 14.8 136 3-147 149-285 (292)
44 PRK13499 rhamnose-proton sympo 99.0 3.1E-07 6.8E-12 85.2 24.1 299 3-317 6-343 (345)
45 KOG4314 Predicted carbohydrate 99.0 2.2E-09 4.7E-14 89.4 8.7 212 75-316 59-277 (290)
46 TIGR00688 rarD rarD protein. T 99.0 8.8E-09 1.9E-13 93.1 12.9 137 176-315 2-142 (256)
47 PRK11689 aromatic amino acid e 98.9 2.5E-08 5.4E-13 92.1 14.4 132 4-147 156-287 (295)
48 PRK02971 4-amino-4-deoxy-L-ara 98.9 2E-08 4.4E-13 80.3 11.9 123 176-319 2-126 (129)
49 PF05653 Mg_trans_NIPA: Magnes 98.9 9.9E-08 2.1E-12 87.8 17.7 275 3-319 6-296 (300)
50 KOG1582 UDP-galactose transpor 98.9 4.1E-08 9E-13 85.7 14.0 263 30-321 70-338 (367)
51 KOG1583 UDP-N-acetylglucosamin 98.9 1.4E-08 3E-13 89.0 10.6 240 62-316 60-315 (330)
52 PRK11453 O-acetylserine/cystei 98.7 3.6E-07 7.9E-12 84.5 15.3 137 4-146 143-286 (299)
53 PF03151 TPT: Triose-phosphate 98.7 4E-07 8.6E-12 75.4 13.1 134 5-144 1-150 (153)
54 PF13536 EmrE: Multidrug resis 98.7 9.1E-08 2E-12 75.2 8.4 108 211-319 3-110 (113)
55 TIGR00803 nst UDP-galactose tr 98.6 8.7E-08 1.9E-12 84.7 8.1 203 95-312 4-221 (222)
56 TIGR00817 tpt Tpt phosphate/ph 98.6 2.5E-07 5.4E-12 85.7 10.7 139 3-147 144-293 (302)
57 PTZ00343 triose or hexose phos 98.5 4.1E-06 8.9E-11 79.2 15.0 137 3-145 193-346 (350)
58 PRK15051 4-amino-4-deoxy-L-ara 98.5 9.6E-07 2.1E-11 68.9 8.7 68 248-315 42-109 (111)
59 COG4975 GlcU Putative glucose 98.5 2.9E-08 6.3E-13 85.6 0.2 280 4-316 2-286 (288)
60 PRK15051 4-amino-4-deoxy-L-ara 98.4 2.4E-06 5.2E-11 66.7 9.6 66 74-145 41-107 (111)
61 COG0697 RhaT Permeases of the 98.4 7.9E-06 1.7E-10 74.6 14.7 132 3-146 153-286 (292)
62 TIGR00776 RhaT RhaT L-rhamnose 98.4 7.2E-06 1.6E-10 75.5 13.6 129 3-146 151-287 (290)
63 COG2962 RarD Predicted permeas 98.3 8.4E-06 1.8E-10 72.7 11.5 140 175-317 6-146 (293)
64 KOG2922 Uncharacterized conser 98.3 3.5E-06 7.5E-11 75.9 8.6 227 71-316 65-307 (335)
65 COG5006 rhtA Threonine/homoser 98.2 1.5E-05 3.3E-10 69.4 11.4 132 4-145 148-280 (292)
66 PF06027 DUF914: Eukaryotic pr 98.2 1.7E-05 3.7E-10 73.8 12.5 140 2-149 166-307 (334)
67 PRK02971 4-amino-4-deoxy-L-ara 98.2 2.5E-05 5.4E-10 62.6 11.3 117 4-146 2-121 (129)
68 PRK10452 multidrug efflux syst 98.0 6E-05 1.3E-09 59.3 9.5 70 249-318 36-106 (120)
69 PRK09541 emrE multidrug efflux 97.8 0.00022 4.7E-09 55.4 9.6 68 250-317 37-105 (110)
70 PF08449 UAA: UAA transporter 97.8 0.00033 7.1E-09 64.9 12.5 127 191-323 15-144 (303)
71 KOG4510 Permease of the drug/m 97.8 6E-06 1.3E-10 72.4 0.7 140 171-318 33-172 (346)
72 PF05653 Mg_trans_NIPA: Magnes 97.6 0.00016 3.5E-09 66.6 7.6 123 172-318 3-125 (300)
73 PF04657 DUF606: Protein of un 97.6 0.0011 2.3E-08 53.9 11.5 132 177-312 2-138 (138)
74 PF06800 Sugar_transport: Suga 97.6 0.00061 1.3E-08 61.1 10.6 131 3-143 137-267 (269)
75 PRK10650 multidrug efflux syst 97.5 0.0015 3.3E-08 50.5 9.8 63 252-314 44-107 (109)
76 PRK11431 multidrug efflux syst 97.3 0.0019 4.1E-08 49.6 8.9 66 250-315 36-102 (105)
77 PRK13499 rhamnose-proton sympo 97.3 0.0018 3.8E-08 60.5 10.0 139 173-316 4-154 (345)
78 PF04657 DUF606: Protein of un 97.3 0.0038 8.3E-08 50.6 10.7 130 6-144 3-138 (138)
79 COG2076 EmrE Membrane transpor 97.3 0.00089 1.9E-08 51.0 6.4 66 252-317 39-105 (106)
80 PF10639 UPF0546: Uncharacteri 97.3 0.0006 1.3E-08 52.8 5.3 109 10-145 2-112 (113)
81 PRK10650 multidrug efflux syst 97.2 0.0074 1.6E-07 46.7 10.5 66 74-145 40-106 (109)
82 PF00893 Multi_Drug_Res: Small 97.1 0.0021 4.6E-08 48.4 7.2 56 251-306 37-93 (93)
83 KOG2765 Predicted membrane pro 97.1 0.003 6.4E-08 58.4 9.3 138 3-147 246-390 (416)
84 COG3238 Uncharacterized protei 97.1 0.009 2E-07 48.6 10.9 140 175-317 4-148 (150)
85 KOG1441 Glucose-6-phosphate/ph 97.0 0.0024 5.2E-08 58.9 7.7 137 3-146 162-306 (316)
86 PRK10452 multidrug efflux syst 97.0 0.0022 4.7E-08 50.5 6.1 66 76-147 36-103 (120)
87 PRK09541 emrE multidrug efflux 96.9 0.012 2.6E-07 45.7 9.6 66 75-146 35-102 (110)
88 PF06379 RhaT: L-rhamnose-prot 96.8 0.45 9.8E-06 44.1 20.9 300 3-316 6-341 (344)
89 PF04142 Nuc_sug_transp: Nucle 96.7 0.0037 7.9E-08 56.0 6.5 77 243-320 18-94 (244)
90 COG2076 EmrE Membrane transpor 96.6 0.016 3.5E-07 44.2 8.0 64 76-145 36-101 (106)
91 PRK11431 multidrug efflux syst 96.6 0.009 2E-07 45.9 6.6 61 79-145 39-100 (105)
92 COG4975 GlcU Putative glucose 96.4 0.0012 2.5E-08 57.7 1.1 134 176-319 2-140 (288)
93 PF07857 DUF1632: CEO family ( 96.4 0.031 6.7E-07 50.0 9.8 179 5-197 1-204 (254)
94 PF10639 UPF0546: Uncharacteri 96.1 0.015 3.3E-07 45.1 5.7 109 183-313 3-112 (113)
95 PF00893 Multi_Drug_Res: Small 95.7 0.081 1.7E-06 39.7 8.0 52 80-137 40-92 (93)
96 TIGR00803 nst UDP-galactose tr 95.5 0.043 9.4E-07 48.3 7.1 66 72-143 155-220 (222)
97 COG3238 Uncharacterized protei 95.5 0.21 4.5E-06 40.8 10.0 133 5-145 6-144 (150)
98 KOG2234 Predicted UDP-galactos 95.5 0.8 1.7E-05 42.6 14.9 142 177-319 16-168 (345)
99 KOG1581 UDP-galactose transpor 95.3 0.27 5.9E-06 44.6 11.1 138 3-148 171-314 (327)
100 PF07857 DUF1632: CEO family ( 94.9 0.14 3.1E-06 45.8 8.2 127 177-320 1-139 (254)
101 KOG1580 UDP-galactose transpor 94.7 0.26 5.6E-06 43.0 8.9 136 5-146 173-312 (337)
102 KOG1444 Nucleotide-sugar trans 94.5 0.38 8.2E-06 44.0 9.9 138 4-147 157-300 (314)
103 KOG4314 Predicted carbohydrate 93.9 0.018 3.9E-07 48.6 0.3 66 256-321 66-131 (290)
104 KOG2922 Uncharacterized conser 93.2 0.022 4.7E-07 51.9 -0.3 130 171-324 16-145 (335)
105 COG5070 VRG4 Nucleotide-sugar 92.6 0.61 1.3E-05 40.5 7.4 113 30-148 182-297 (309)
106 KOG1443 Predicted integral mem 90.9 4.8 0.0001 36.8 11.5 136 4-145 164-313 (349)
107 PF06379 RhaT: L-rhamnose-prot 88.7 2.8 6.1E-05 39.0 8.6 142 173-317 4-155 (344)
108 KOG4831 Unnamed protein [Funct 88.7 0.9 1.9E-05 34.4 4.4 60 255-314 64-124 (125)
109 PRK06638 NADH:ubiquinone oxido 88.6 15 0.00033 31.7 14.9 34 284-317 133-168 (198)
110 PF07168 Ureide_permease: Urei 88.5 0.67 1.4E-05 42.1 4.3 64 252-316 81-147 (336)
111 KOG4831 Unnamed protein [Funct 88.2 9.7 0.00021 29.0 10.2 112 6-145 5-123 (125)
112 PRK02237 hypothetical protein; 85.2 3.3 7.1E-05 31.6 5.8 46 273-318 63-108 (109)
113 PF02694 UPF0060: Uncharacteri 80.3 1.9 4.1E-05 32.8 2.9 46 273-318 61-106 (107)
114 KOG1442 GDP-fucose transporter 80.2 2.9 6.2E-05 37.7 4.4 141 3-149 184-329 (347)
115 PF05977 MFS_3: Transmembrane 79.9 44 0.00096 33.5 13.4 45 272-316 349-393 (524)
116 KOG1582 UDP-galactose transpor 79.6 11 0.00024 34.0 7.8 126 16-147 202-332 (367)
117 KOG3912 Predicted integral mem 79.0 2.2 4.8E-05 38.5 3.4 64 253-316 96-159 (372)
118 PF04342 DUF486: Protein of un 77.4 2.5 5.3E-05 32.1 2.7 30 284-313 77-106 (108)
119 COG3169 Uncharacterized protei 73.0 8.8 0.00019 28.7 4.6 33 283-315 83-115 (116)
120 PF01102 Glycophorin_A: Glycop 72.1 3.1 6.6E-05 32.8 2.2 21 300-320 74-94 (122)
121 PF03547 Mem_trans: Membrane t 70.0 1E+02 0.0022 29.2 12.8 14 211-224 36-49 (385)
122 PF07168 Ureide_permease: Urei 67.3 4.5 9.8E-05 37.0 2.5 112 9-122 1-125 (336)
123 PF10225 DUF2215: Uncharacteri 64.1 50 0.0011 29.6 8.6 42 262-303 114-155 (249)
124 COG1742 Uncharacterized conser 62.9 14 0.00031 28.0 4.0 46 273-318 62-107 (109)
125 PF15471 TMEM171: Transmembran 61.3 9.5 0.00021 34.0 3.3 25 297-321 161-185 (319)
126 PF06570 DUF1129: Protein of u 57.4 1.3E+02 0.0027 26.0 11.6 31 68-98 145-175 (206)
127 PF11044 TMEMspv1-c74-12: Plec 52.7 11 0.00024 23.6 1.6 17 295-311 2-18 (49)
128 COG3086 RseC Positive regulato 51.9 10 0.00022 30.6 1.8 25 266-290 71-95 (150)
129 PF06570 DUF1129: Protein of u 50.9 1.5E+02 0.0033 25.5 9.2 24 175-198 178-201 (206)
130 PF07698 7TM-7TMR_HD: 7TM rece 49.5 1.6E+02 0.0035 24.8 17.3 38 97-142 59-97 (194)
131 PF05297 Herpes_LMP1: Herpesvi 46.8 6.5 0.00014 35.5 0.0 47 94-145 48-95 (381)
132 TIGR00770 Dcu anaerobic c4-dic 46.5 2.9E+02 0.0063 27.0 14.3 33 109-149 3-35 (430)
133 PF03595 SLAC1: Voltage-depend 46.4 2.3E+02 0.0051 26.1 10.5 78 131-225 6-91 (330)
134 PF06679 DUF1180: Protein of u 46.0 32 0.0007 28.6 4.0 12 334-345 136-147 (163)
135 PF08507 COPI_assoc: COPI asso 45.4 42 0.00091 26.9 4.6 17 298-314 88-104 (136)
136 MTH00057 ND6 NADH dehydrogenas 43.1 2.1E+02 0.0045 24.3 13.4 32 284-315 132-165 (186)
137 COG4657 RnfA Predicted NADH:ub 40.0 2.2E+02 0.0047 23.7 9.6 52 173-224 129-185 (193)
138 PF15345 TMEM51: Transmembrane 39.9 27 0.00058 30.7 2.7 26 300-325 66-91 (233)
139 PF03348 Serinc: Serine incorp 39.2 3.8E+02 0.0082 26.2 20.7 58 247-317 248-305 (429)
140 KOG1583 UDP-N-acetylglucosamin 37.7 40 0.00086 30.7 3.5 67 257-323 78-145 (330)
141 PF04342 DUF486: Protein of un 37.0 1.8E+02 0.004 22.2 6.4 32 108-145 75-106 (108)
142 PRK02237 hypothetical protein; 36.4 2E+02 0.0043 22.1 8.1 38 104-147 68-105 (109)
143 PF06946 Phage_holin_5: Phage 36.1 1.8E+02 0.004 21.7 6.3 59 261-319 22-84 (93)
144 PF06781 UPF0233: Uncharacteri 35.5 93 0.002 22.9 4.6 57 240-316 30-86 (87)
145 TIGR00905 2A0302 transporter, 35.0 4.4E+02 0.0096 25.8 15.4 44 276-320 395-439 (473)
146 COG4854 Predicted membrane pro 34.6 1.6E+02 0.0034 22.8 5.7 28 117-148 64-91 (126)
147 PF08693 SKG6: Transmembrane a 34.6 30 0.00064 21.4 1.6 19 301-319 21-39 (40)
148 PF15102 TMEM154: TMEM154 prot 33.5 40 0.00086 27.4 2.6 24 300-323 66-89 (146)
149 PF10101 DUF2339: Predicted me 33.4 5.8E+02 0.013 26.7 27.4 95 20-121 19-116 (745)
150 COG4858 Uncharacterized membra 32.8 3.1E+02 0.0068 23.4 9.9 106 11-123 107-218 (226)
151 PRK09412 anaerobic C4-dicarbox 31.3 5.1E+02 0.011 25.3 13.4 34 108-149 6-39 (433)
152 COG3302 DmsC DMSO reductase an 30.9 4.2E+02 0.009 24.2 18.6 51 131-191 111-165 (281)
153 PF07214 DUF1418: Protein of u 30.6 1E+02 0.0022 23.1 4.1 18 300-317 50-67 (96)
154 KOG1330 Sugar transporter/spin 30.4 2.2E+02 0.0047 28.2 7.4 40 169-208 281-320 (493)
155 KOG0682 Ammonia permease [Inor 30.1 5.6E+02 0.012 25.5 12.7 38 108-145 199-237 (500)
156 PF05297 Herpes_LMP1: Herpesvi 29.7 18 0.00038 32.8 0.0 15 126-140 133-147 (381)
157 KOG2766 Predicted membrane pro 29.3 84 0.0018 28.3 4.1 130 5-145 167-297 (336)
158 PF15099 PIRT: Phosphoinositid 29.3 23 0.00051 27.8 0.6 18 242-259 56-73 (129)
159 TIGR00544 lgt prolipoprotein d 29.1 47 0.001 30.3 2.7 25 295-319 246-270 (278)
160 TIGR03810 arg_ornith_anti argi 28.8 5.6E+02 0.012 25.0 17.0 24 297-320 411-434 (468)
161 PF06123 CreD: Inner membrane 28.6 5.7E+02 0.012 25.0 11.5 47 175-225 299-345 (430)
162 PF02694 UPF0060: Uncharacteri 28.3 53 0.0012 25.1 2.3 39 103-147 65-103 (107)
163 TIGR01167 LPXTG_anchor LPXTG-m 28.2 93 0.002 17.9 3.0 13 296-308 11-23 (34)
164 PRK10862 SoxR reducing system 27.4 19 0.00041 29.7 -0.2 13 276-288 81-93 (154)
165 PF04246 RseC_MucC: Positive r 27.3 19 0.00042 28.7 -0.1 42 272-314 70-114 (135)
166 COG2917 Intracellular septatio 26.9 2.6E+02 0.0056 23.5 6.3 62 80-149 7-70 (180)
167 TIGR02840 spore_YtaF putative 25.5 40 0.00087 29.2 1.5 46 270-315 34-81 (206)
168 KOG1623 Multitransmembrane pro 25.1 5E+02 0.011 23.2 8.4 30 173-202 125-154 (243)
169 TIGR02865 spore_II_E stage II 25.1 8.5E+02 0.018 25.9 16.5 44 96-145 11-54 (764)
170 PF08229 SHR3_chaperone: ER me 24.3 3E+02 0.0064 23.7 6.4 16 131-146 11-26 (196)
171 PLN00028 nitrate transmembrane 23.6 6.9E+02 0.015 24.3 10.6 14 300-313 417-430 (476)
172 PRK10599 calcium/sodium:proton 23.4 6.6E+02 0.014 24.0 12.2 17 250-266 114-130 (366)
173 PLN02292 ferric-chelate reduct 23.1 72 0.0016 33.3 3.0 50 308-357 604-656 (702)
174 PF12606 RELT: Tumour necrosis 22.8 1.3E+02 0.0027 19.7 3.0 14 306-319 14-27 (50)
175 PRK11469 hypothetical protein; 22.6 50 0.0011 28.2 1.5 43 273-315 44-87 (188)
176 PRK13108 prolipoprotein diacyl 22.5 7.6E+02 0.016 24.4 21.8 25 295-319 254-278 (460)
177 PRK00159 putative septation in 22.4 2.1E+02 0.0046 21.1 4.4 56 241-316 31-86 (87)
178 KOG4255 Uncharacterized conser 22.2 6.9E+02 0.015 23.8 10.7 48 180-228 54-101 (439)
179 PF11361 DUF3159: Protein of u 21.7 5.1E+02 0.011 22.1 11.4 26 171-196 76-101 (187)
180 TIGR00892 2A0113 monocarboxyla 21.3 3.4E+02 0.0075 26.3 7.3 6 31-36 51-56 (455)
181 COG0387 ChaA Ca2+/H+ antiporte 21.3 7.2E+02 0.016 23.7 14.4 24 293-316 161-184 (368)
182 PF13038 DUF3899: Domain of un 21.0 45 0.00097 24.6 0.8 19 296-314 3-21 (92)
183 PF05961 Chordopox_A13L: Chord 20.8 1.5E+02 0.0032 20.6 3.1 21 300-320 7-27 (68)
184 PRK10489 enterobactin exporter 20.3 7.3E+02 0.016 23.4 13.4 19 299-317 382-400 (417)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=312.17 Aligned_cols=337 Identities=41% Similarity=0.681 Sum_probs=263.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHH
Q 018256 1 MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSC 80 (359)
Q Consensus 1 ~~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 80 (359)
|+.+++..|+...++++...++.|.+++++++|..+.++|+.+++++++++++.++|+++.++.+++++....+.|++++
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~ 89 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGS 89 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999998887665533325556888889999999987
Q ss_pred HHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHh------hccccceeccccccchhHHHHHhHHHHHHhhcCCCCC
Q 018256 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFR------MEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPIT 154 (359)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~------~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~ 154 (359)
..+.+++.|++|++++.++++.++.|+++.+++++++ |||++ +.+++|++++++|+.++..++++...
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~------~~~~~G~~l~~~Gv~ll~~~~g~~~~ 163 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSS------VAKVMGTILSLIGALVVIFYHGPRVF 163 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhccccc------HHHHHHHHHHHHHHHHHHHccCcccc
Confidence 7778999999999999999999999999999999995 66666 66999999999999998665543211
Q ss_pred CCC--Ccccc-hhh-hccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcC-
Q 018256 155 SAP--SKNKL-INE-LVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEK- 229 (359)
Q Consensus 155 ~~~--~~~~~-~~~-~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 229 (359)
..+ .+.+. ..+ ....+..++.+|++++++++++||+|.+++|+..+++++....++++..++.+...+..+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~ 243 (358)
T PLN00411 164 VASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKN 243 (358)
T ss_pred cccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 100 00000 000 0011223456799999999999999999999998888756677888888887777776665543
Q ss_pred CCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHH
Q 018256 230 NPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALG 309 (359)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~g 309 (359)
+...|....+.....++|.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|
T Consensus 244 ~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~G 322 (358)
T PLN00411 244 NPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLG 322 (358)
T ss_pred CcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 2333433233334567788875 668999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccccccccccccccCCCCCCCccccccCCCcc
Q 018256 310 FYAVIWGQAKEEKMDEDHTEISGFKPSSPCVPLLINKSNTE 350 (359)
Q Consensus 310 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (359)
+++..+.++||.+.+++. +++++++ |..-+.-|||
T Consensus 323 v~l~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~ 357 (358)
T PLN00411 323 FYAVMWGKANEEKDQLLS---FSGKEKT---PLLLNGKNDQ 357 (358)
T ss_pred HHHHHhhhhhhhhhcccC---ccccccc---hhhhhccccc
Confidence 999998776664443332 3345556 5555444443
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=253.09 Aligned_cols=278 Identities=17% Similarity=0.174 Sum_probs=230.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHHHH
Q 018256 6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQM 84 (359)
Q Consensus 6 ~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~ 84 (359)
++.++...++||.+++++|.+.+ +++|..++++|+.++.++++++...+++ +. .+++++......|.++ ..++.
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~~---~~~~~~~~~~~~g~~~~~~~~~ 84 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGH-PL---PTLRQWLNAALIGLLLLAVGNG 84 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCC-CC---CcHHHHHHHHHHHHHHHHHHHH
Confidence 45667788999999999999777 8999999999999999998877644322 22 3467778888889887 77888
Q ss_pred HHHHHh-ccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccch
Q 018256 85 FHYFGI-ENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLI 163 (359)
Q Consensus 85 ~~~~al-~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~ 163 (359)
+++.+. ++++++.++++.++.|+++.+++.+ +|||++++ +++|++++++|+.++...+ .
T Consensus 85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~~--~----------- 144 (292)
T PRK11272 85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSGG--N----------- 144 (292)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcCc--c-----------
Confidence 999999 9999999999999999999999986 69999955 9999999999998873211 1
Q ss_pred hhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHH
Q 018256 164 NELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELM 243 (359)
Q Consensus 164 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (359)
.+....|++++++++++||.|.+..||..++ + +...+.+++.++.+...+.....+.+... ..+...|.
T Consensus 145 -------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 213 (292)
T PRK11272 145 -------LSGNPWGAILILIASASWAFGSVWSSRLPLP-V-GMMAGAAEMLAAGVVLLIASLLSGERLTA--LPTLSGFL 213 (292)
T ss_pred -------cccchHHHHHHHHHHHHHHHHHHHHHhcCCC-c-chHHHHHHHHHHHHHHHHHHHHcCCcccc--cCCHHHHH
Confidence 1123579999999999999999999987543 3 45667888888888877776544332211 11223588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256 244 AIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 244 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~ 319 (359)
.+++.++++++++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+.+++
T Consensus 214 ~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~ 289 (292)
T PRK11272 214 ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL 289 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999999999999999999999999999999999999999999999998876554
No 3
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=2.7e-32 Score=251.46 Aligned_cols=281 Identities=14% Similarity=0.065 Sum_probs=225.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 018256 2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCC 81 (359)
Q Consensus 2 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (359)
+.+++..+++++++|+.++.+.|++.+ +.+|..++++|++++.++++++. ++++. +.++++++..+..|++.+.
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~--~~~~~---~~~~~~~~~~~~~g~~~~~ 83 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFP-LVGAPGVTALRLALGTLILIAIF--KPWRL---RFAKEQRLPLLFYGVSLGG 83 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHH--hHHhc---cCCHHHHHHHHHHHHHHHH
Confidence 578899999999999999999999888 69999999999999998887654 22222 2456777888888988888
Q ss_pred HHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCccc
Q 018256 82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNK 161 (359)
Q Consensus 82 ~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~ 161 (359)
.+.++++|+++++++.++++.++.|+++.+++ +||+. +..++.++++|+.++.. .+..
T Consensus 84 ~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--------~~~~~~i~~~Gv~li~~-~~~~--------- 141 (293)
T PRK10532 84 MNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--------DFVWVVLAVLGLWFLLP-LGQD--------- 141 (293)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--------HHHHHHHHHHHHheeee-cCCC---------
Confidence 88999999999999999999999999999886 25554 45667888999988742 1111
Q ss_pred chhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchh
Q 018256 162 LINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIE 241 (359)
Q Consensus 162 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (359)
.++....|++++++++++||.|.++.||..++.+ +... .+...++.+++.+.....+. ...++ ...
T Consensus 142 --------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~~---~~~ 207 (293)
T PRK10532 142 --------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAG-EALWH---WSI 207 (293)
T ss_pred --------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccC-cccCC---HHH
Confidence 1222357999999999999999999999877766 6655 45666666666666553322 11111 123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256 242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE 321 (359)
Q Consensus 242 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~ 321 (359)
|...+++|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|+....+..+|+.
T Consensus 208 ~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~ 287 (293)
T PRK10532 208 LPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREP 287 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 55667999999999999999999999999999999999999999999999999999999999999999999988776654
Q ss_pred ccc
Q 018256 322 KMD 324 (359)
Q Consensus 322 ~~~ 324 (359)
|.+
T Consensus 288 ~~~ 290 (293)
T PRK10532 288 KIK 290 (293)
T ss_pred CCC
Confidence 443
No 4
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=9.6e-32 Score=248.59 Aligned_cols=280 Identities=18% Similarity=0.129 Sum_probs=216.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG 82 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 82 (359)
+..+..++++++||.+++++|.+.+ +++|..+.++|++++++.+.++. + ++ +.++ +.....|++. ...
T Consensus 4 ~~~l~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~~~--~-~~----~~~~---~~~~~~g~~~~~~~ 72 (299)
T PRK11453 4 KDGVLALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIFFV--A-RP----KVPL---NLLLGYGLTISFGQ 72 (299)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHh--c-CC----CCch---HHHHHHHHHHHHHH
Confidence 4456788899999999999999877 79999999999999877665433 2 11 1222 2344456655 556
Q ss_pred HHHHHHHhcc-CCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCccc
Q 018256 83 QMFHYFGIEN-GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNK 161 (359)
Q Consensus 83 ~~~~~~al~~-~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~ 161 (359)
..+++.++++ .+++.++++.++.|+++.+++++++|||++++ +++|++++++|+.++.. .+..
T Consensus 73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~-~~~~--------- 136 (299)
T PRK11453 73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE-DSLN--------- 136 (299)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc-ccCC---------
Confidence 6678889998 57889999999999999999999999999955 99999999999988842 1100
Q ss_pred chhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc--hHHHHHHHHHHHHHHHHHHHHhcCCC---Ccccc
Q 018256 162 LINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAE--LMVTLICSIFVTILSSAVSLVAEKNP---NAWRL 236 (359)
Q Consensus 162 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 236 (359)
+......|+++++.++++|+.|.+++||..++.+++ .....+....+.+.........+.+. ..+..
T Consensus 137 --------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (299)
T PRK11453 137 --------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT 208 (299)
T ss_pred --------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhcc
Confidence 122235799999999999999999999986654422 33345555555444444433333321 11111
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256 237 RPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 237 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
.+...|..++|.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++|++|+++..+.
T Consensus 209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 22245889999999999999999999999999999999999999999999999999999999999999999999988876
Q ss_pred Cc
Q 018256 317 QA 318 (359)
Q Consensus 317 ~~ 318 (359)
++
T Consensus 289 ~~ 290 (299)
T PRK11453 289 LR 290 (299)
T ss_pred hh
Confidence 65
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=2.8e-32 Score=251.62 Aligned_cols=284 Identities=13% Similarity=0.073 Sum_probs=212.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-H
Q 018256 2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-C 80 (359)
Q Consensus 2 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~ 80 (359)
+.+++++++.++++||.+++.+|.+.+ +++|..+.++|+.++.++++++. ++++. ++.+ ++.++.+.++ +
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~~---~~~~~-~~~~----~~~~~~~~l~~~ 72 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLTV---GFPRL-RQFP----KRYLLAGGLLFV 72 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHHc---ccccc-cccc----HHHHHHHhHHHH
Confidence 567889999999999999999999777 79999999999999998887542 11111 1111 2233444445 7
Q ss_pred HHHHHHHHHhc----cCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCC
Q 018256 81 CGQMFHYFGIE----NGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSA 156 (359)
Q Consensus 81 ~~~~~~~~al~----~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~ 156 (359)
.+..+++.|++ +.+++.++++.++.|+++.+++++++|||++++ +++|++++++|++++...+ ...+..
T Consensus 73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~~-~~~~~~ 145 (295)
T PRK11689 73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGGD-NGLSLA 145 (295)
T ss_pred HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecCC-ccchhh
Confidence 77788888775 457788889999999999999999999999955 9999999999998884321 111000
Q ss_pred CCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 018256 157 PSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRL 236 (359)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (359)
+. ..+......|++++++++++||.|.++.||..++.+ +..... ..+.+.+.+.....+.....+
T Consensus 146 --------~~-~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~~---~~~~~~l~~~~~~~~~~~~~~-- 210 (295)
T PRK11689 146 --------EL-INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLFF---ILTALALWIKYFLSPQPAMVF-- 210 (295)
T ss_pred --------hh-hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHHH---HHHHHHHHHHHHHhcCccccC--
Confidence 00 001112346999999999999999999999876665 554322 223333333333222211111
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256 237 RPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 237 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
. ...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++++++++++||+++..+++|+++|+.|+++....
T Consensus 211 ~-~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 211 S-LPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred C-HHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 1 234677778775 78999999999999999999999999999999999999999999999999999999999888765
Q ss_pred Cc
Q 018256 317 QA 318 (359)
Q Consensus 317 ~~ 318 (359)
++
T Consensus 289 ~~ 290 (295)
T PRK11689 289 TR 290 (295)
T ss_pred Hh
Confidence 44
No 6
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.98 E-value=1.4e-30 Score=240.30 Aligned_cols=277 Identities=15% Similarity=0.090 Sum_probs=205.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCC-CCCC-CHHHHHHHHHHHHHH
Q 018256 2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRT-PPQL-TWSIVCRIFLLGLLS 79 (359)
Q Consensus 2 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~-~~~~-~~~~~~~~~~~g~~~ 79 (359)
+.++++.+++++++||.+++..|. .+ +++|.++.++|++++.+++.++...+++... .++. +++++.. ...+.++
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~k~-~~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 82 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYFKL-IY-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LAVSAVL 82 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHH-hc-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HHHHHHH
Confidence 568899999999999999999998 45 7999999999999999887766544332111 0011 3333333 3355555
Q ss_pred -HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCC
Q 018256 80 -CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS 158 (359)
Q Consensus 80 -~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~ 158 (359)
+.++.++++|+++++++.++++.++.|+++.+++++++|||++++ ++.|++++++|++++...+
T Consensus 83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~--------- 147 (296)
T PRK15430 83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTF--------- 147 (296)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHc---------
Confidence 889999999999999999999999999999999999999999955 9999999999999884221
Q ss_pred cccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Q 018256 159 KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWRLR 237 (359)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (359)
++. .+++++++++||.|.++.|+..++.. +....+.+...++.+...+. .......+...
T Consensus 148 ------------~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 208 (296)
T PRK15430 148 ------------GSL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQN 208 (296)
T ss_pred ------------CCc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcccccCC
Confidence 111 14678899999999999998643221 12223333443433332111 11111112211
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256 238 PDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 238 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
+...+..+.+.++ .+.++|.+|++++++.++.+++.+.+++|+++++++++++||++++.+++|+++|++|+.+....
T Consensus 209 ~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 209 PMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred cHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1112333444455 67899999999999999999999999999999999999999999999999999999888877754
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.98 E-value=3.1e-30 Score=233.87 Aligned_cols=257 Identities=19% Similarity=0.219 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHhccCC
Q 018256 16 DVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIENGS 94 (359)
Q Consensus 16 ~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~ 94 (359)
||.+++..|.+++++.|+....+.|.+.+.+++.+.... + + +++++.+....|.++ ++++.+++.|+++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~--~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~ 72 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R--P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRLP 72 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c--c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 899999999988878899999999999988887665422 2 1 234556677777777 999999999999999
Q ss_pred cchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCch
Q 018256 95 PALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNW 174 (359)
Q Consensus 95 ~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (359)
++.++++.++.|+++.+++.+++|||++++ ++.|++++++|+.++.. ++ +.+..
T Consensus 73 ~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~-------------------~~~~~ 126 (260)
T TIGR00950 73 VGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG-------------------NLSIN 126 (260)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-------------------ccccc
Confidence 999999999999999999999999999955 99999999999988742 21 12234
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHH
Q 018256 175 TIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAV 253 (359)
Q Consensus 175 ~~G~~~~l~a~~~~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 253 (359)
..|++++++++++|+.+.++.|+..++.+ ++.....+.+.++.+...+..+..++.. .+ ....|..+++.+++++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGT 202 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHH
Confidence 68999999999999999999999887655 1234455678888888887776543322 11 2235777889999999
Q ss_pred HHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHH
Q 018256 254 SVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGF 310 (359)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi 310 (359)
+++|.+|++++++.++.+++.+.+++|+++++++++++||+++..+++|+++++.|+
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999886
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=2.5e-29 Score=232.96 Aligned_cols=273 Identities=12% Similarity=0.123 Sum_probs=213.0
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchh
Q 018256 19 LNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALA 98 (359)
Q Consensus 19 ~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a 98 (359)
..+.+|+++++...|..+.++|+..+.+.+.+. +....+++ ++.+++++++.+..|++++.+..+.+.|++|++++.+
T Consensus 17 ~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~ 94 (302)
T TIGR00817 17 FNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLS-WSSGLPKR-LKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFT 94 (302)
T ss_pred HHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHH-HHhCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 346899988854779999999999887776543 11122223 5578899999999999998889999999999999999
Q ss_pred hhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHH
Q 018256 99 SAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGG 178 (359)
Q Consensus 99 ~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 178 (359)
+++.++.|+++.+++++++|||++++ ++.|++++++|+.+.. .+ +.+....|+
T Consensus 95 ~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~-~~--------------------~~~~~~~G~ 147 (302)
T TIGR00817 95 HTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS-DT--------------------ELSFNWAGF 147 (302)
T ss_pred HHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc-CC--------------------cccccHHHH
Confidence 99999999999999999999999955 9999999999997652 11 122235799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh--hCCCchHHHHHHHHHHHHHHHHHHHHhcCCCC---cccc-----cCchhHHHHHHH
Q 018256 179 IFLAAHSVILAIYYIVQAWIVR--DYPAELMVTLICSIFVTILSSAVSLVAEKNPN---AWRL-----RPDIELMAIGYS 248 (359)
Q Consensus 179 ~~~l~a~~~~a~~~vl~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~ 248 (359)
+++++++++|+.|.++.||..+ +.+ +...+.+++..+.+.+.+.....++... .+.. .....+...+..
T Consensus 148 ~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (302)
T TIGR00817 148 LSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVA 226 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHH
Confidence 9999999999999999999887 566 8999999999999999998865543211 1100 000111112222
Q ss_pred HHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256 249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE 321 (359)
Q Consensus 249 g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~ 321 (359)
+..+....+.++++++++.+|++.++..+++|++++++|++++||+++..+++|+++++.|++++.+.|.||+
T Consensus 227 ~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~ 299 (302)
T TIGR00817 227 AMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP 299 (302)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence 2212222223555899999999999999999999999999999999999999999999999999997665443
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=5.4e-27 Score=215.03 Aligned_cols=276 Identities=15% Similarity=0.135 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018256 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM 84 (359)
Q Consensus 5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (359)
..++.++++++|+...+..|...+ .-++ ..+++.....+++.|+...+.++...+..+++.+......++.+..++.
T Consensus 2 ~~~~~~~aa~~~a~~~~~~k~~~~-~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 2 ALTLVVFSALMHAGWNLMAKSHAD-KEPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFL 78 (281)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCC-chhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 356788999999999999996444 3233 3477777777777776654321221122334444444455555599999
Q ss_pred HHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchh
Q 018256 85 FHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLIN 164 (359)
Q Consensus 85 ~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~ 164 (359)
+++.|+++.+++.++.+.++.|+++.+++++++|||++++ +++|+.+++.|++++...+ .
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~~~-~------------- 138 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGLSR-F------------- 138 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhccc-c-------------
Confidence 9999999999999999999999999999999999999955 9999999999999874211 1
Q ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCch---HHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchh
Q 018256 165 ELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAEL---MVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIE 241 (359)
Q Consensus 165 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (359)
......|+.++++++++|+.|.++.|+..++.++.. ....+..........+.....+.. .+. .....
T Consensus 139 ------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~ 209 (281)
T TIGR03340 139 ------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF-PYARQ 209 (281)
T ss_pred ------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh-hhHHH
Confidence 112235788999999999999999887654433111 122223322211111221111111 111 11223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018256 242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYA 312 (359)
Q Consensus 242 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l 312 (359)
++..++.+.+.+.++|.+|++++++.++++++.+.+++|+++++++++++||+++..+++|+++|++|+++
T Consensus 210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 56677888889999999999999999999999999999999999999999999999999999999999875
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=2.5e-26 Score=216.27 Aligned_cols=280 Identities=15% Similarity=0.136 Sum_probs=217.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCC--HHHHHHHHHHHHHHHHH
Q 018256 6 TAAMVTLEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLT--WSIVCRIFLLGLLSCCG 82 (359)
Q Consensus 6 ~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~ 82 (359)
.++.++=-.+-.......|.+++ .++ |+.+..+|++++.++...... .+.+++ |+++ +++++..+..|+++...
T Consensus 51 ~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~-~~~~~~~~~~~~llp~gl~~~~~ 127 (350)
T PTZ00343 51 ALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYWA-TGFRKI-PRIKSLKLFLKNFLPQGLCHLFV 127 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 33333334445556788999888 689 999999999999876544322 222222 3443 45778899999999656
Q ss_pred HHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccc
Q 018256 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKL 162 (359)
Q Consensus 83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~ 162 (359)
+...+.|+++++++.++++..+.|+++++++++++|||++++ ++.++++++.|+.+.+..+
T Consensus 128 ~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~~~------------- 188 (350)
T PTZ00343 128 HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASVKE------------- 188 (350)
T ss_pred HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheeccc-------------
Confidence 777889999999999999999999999999999999999955 9999999999999974211
Q ss_pred hhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC------CchHHHHHHHHHHHHHHHHHHHHhcCCC--Ccc
Q 018256 163 INELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP------AELMVTLICSIFVTILSSAVSLVAEKNP--NAW 234 (359)
Q Consensus 163 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 234 (359)
.+....|++++++++++++.|+++.|+..++.+ ++.....++.+.+.++++|+....|... ..+
T Consensus 189 --------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~ 260 (350)
T PTZ00343 189 --------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVW 260 (350)
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 223467999999999999999999999876532 2555666778899999998886554321 111
Q ss_pred c----ccCchhHHHHHHHHHHHHHHHHHHHHH----HHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHH
Q 018256 235 R----LRPDIELMAIGYSAIFAVSVRSVFHTW----ALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATI 306 (359)
Q Consensus 235 ~----~~~~~~~~~~~~~g~~~~~~~~~~~~~----~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~li 306 (359)
. ......+..+++. ++.+++.|.+|+. ++++.+|.+.++..+++|+++++++++++||++++.+++|++++
T Consensus 261 ~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~li 339 (350)
T PTZ00343 261 TNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVA 339 (350)
T ss_pred HHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHH
Confidence 0 0001112334443 4567899999995 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc
Q 018256 307 ALGFYAVIWG 316 (359)
Q Consensus 307 i~gi~l~~~~ 316 (359)
+.|++++++.
T Consensus 340 i~Gv~lYs~~ 349 (350)
T PTZ00343 340 ILGALLYSLF 349 (350)
T ss_pred HHHHHHHhhc
Confidence 9999998865
No 11
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=1.2e-25 Score=206.83 Aligned_cols=295 Identities=15% Similarity=0.170 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018256 8 AMVTLEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFH 86 (359)
Q Consensus 8 ~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 86 (359)
.-=..+++-..+...++...+.+.+ |....++-+..-.++..+....+++.++..+.-+++++++++.+++...++++.
T Consensus 17 lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~ 96 (334)
T PF06027_consen 17 LGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLV 96 (334)
T ss_pred HHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHH
Confidence 3334556666777777764444444 666666666555555555544443332212334567788889999999999999
Q ss_pred HHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhh
Q 018256 87 YFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINEL 166 (359)
Q Consensus 87 ~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~ 166 (359)
+.|++|++.+.++++..+.-+++++++++++|+|.++ .+++|+++++.|+.++...|....+
T Consensus 97 v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~------~~~~gv~i~i~Gv~lv~~sD~~~~~------------ 158 (334)
T PF06027_consen 97 VLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSW------FHILGVLICIAGVVLVVVSDVLSGS------------ 158 (334)
T ss_pred HHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhH------HHHHHHHHHHhhhhheeeecccccc------------
Confidence 9999999999999999999999999999999999995 5999999999999988654422111
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCC-CCcccccCchhHHHH
Q 018256 167 VQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIELMAI 245 (359)
Q Consensus 167 ~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 245 (359)
.+++..+...|+++++++++.||.++++.++..++.+ ..++.....+++.+++.+.....|.. ......++.. +..+
T Consensus 159 ~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~-~~~~ 236 (334)
T PF06027_consen 159 DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQV-IGLL 236 (334)
T ss_pred cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhh-HHHH
Confidence 1123457789999999999999999999999999887 88889999999999998887766653 2222222211 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccc
Q 018256 246 GYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKM 323 (359)
Q Consensus 246 ~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~ 323 (359)
+. ..++..+.|.+....++..+|+...+-..+..+++++++++++|+++++..++|.++|++|++++...++++.++
T Consensus 237 v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~ 313 (334)
T PF06027_consen 237 VG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEA 313 (334)
T ss_pred HH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccccc
Confidence 22 233567778888899999999999999999999999999999999999999999999999999999876655443
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=1.1e-25 Score=203.58 Aligned_cols=249 Identities=10% Similarity=0.037 Sum_probs=184.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccC----CCCCCCHHH-HHHHHHHHHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKR----TPPQLTWSI-VCRIFLLGLL 78 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~----~~~~~~~~~-~~~~~~~g~~ 78 (359)
|+++++++++++||.+++++|. .+ +++|.+++++|++++.+++.++...+++++ +.++.++++ +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5889999999999999999998 55 699999999999999988776654433211 101122222 3456677877
Q ss_pred HHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCC
Q 018256 79 SCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS 158 (359)
Q Consensus 79 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~ 158 (359)
.+.++.++++|++++++++++++.++.|+++.+++++++|||++++ ++++++++++|++++...+
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~--------- 144 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLK--------- 144 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHc---------
Confidence 8999999999999999999999999999999999999999999955 9999999999998874321
Q ss_pred cccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccC
Q 018256 159 KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRP 238 (359)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (359)
.+.. .++++++++||.|.+..|+..++ + ....... .+...+...+.....+... ....++
T Consensus 145 ------------~~~~----~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~ 204 (256)
T TIGR00688 145 ------------GSLP----WEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLLQTDFAT-VQQTNP 204 (256)
T ss_pred ------------CCch----HHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHHHhccCc-ccccCc
Confidence 1111 35788999999999999987543 3 2222221 1222222222211111111 111112
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHH
Q 018256 239 DIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAF 290 (359)
Q Consensus 239 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~ 290 (359)
...|..+++.|++ +.++|.++++++++.++++++.+.|++|+++++++.+.
T Consensus 205 ~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 205 FPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 2357788888875 88999999999999999999999999999999999864
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.93 E-value=2.4e-23 Score=191.15 Aligned_cols=279 Identities=21% Similarity=0.263 Sum_probs=211.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCCCHHHHHHHHHHHHHH-H
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKR-TPPQLTWSIVCRIFLLGLLS-C 80 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~-~ 80 (359)
.......++.++.|+.+....|...++..++....+.|.+.+.+...+.. .+++. . .+.. ++.++..+.+.++ .
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 81 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLL--LLEPRGL-RPAL-RPWLLLLLLALLGLA 81 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHH--Hhhcccc-cccc-cchHHHHHHHHHHHH
Confidence 45667788888999999999999666336777777779998888743332 22211 1 1111 1134455555555 9
Q ss_pred HHHHHHHHHhccCCcchhhhhhccchHHHHHHHH-HHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCc
Q 018256 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAI-IFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSK 159 (359)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~-l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~ 159 (359)
..+.+++.++++++++.++.+.++.|+++.+++. +++|||++++ ++.++++++.|++++...++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~~------- 148 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGGG------- 148 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCcc-------
Confidence 9999999999999999999999999999999996 7779999954 9999999999999984322110
Q ss_pred ccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHH-HHHHHHHHHHHHHHHHhcCCCCcccccC
Q 018256 160 NKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTL-ICSIFVTILSSAVSLVAEKNPNAWRLRP 238 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (359)
... ...|+.+++.+++++|.+.+..|+.. +.+ +..... +..........+... .+.+ ....
T Consensus 149 ----------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~ 210 (292)
T COG0697 149 ----------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG----APIL 210 (292)
T ss_pred ----------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc----ccCC
Confidence 011 57899999999999999999999887 444 555555 444311111111111 1111 1112
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256 239 DIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 239 ~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
...+..+.+.|++++++++.++++++++.++..++.+.+++|+++.+++++++||+++..+++|+++++.|+.+...+
T Consensus 211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 235788889999999999999999999999999999999999999999999999999999999999999999998877
No 14
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.93 E-value=1.5e-23 Score=179.23 Aligned_cols=275 Identities=14% Similarity=0.079 Sum_probs=226.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018256 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM 84 (359)
Q Consensus 5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (359)
++..++.+.+.-=....+.|..++ .++|...+.+|..++++++.++. |+.+ .++++++++.....|+..+..|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP-~vG~~g~t~lRl~~aaLIll~l~----RPwr-~r~~~~~~~~~~~yGvsLg~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFP-LVGAAGVTALRLAIAALILLALF----RPWR-RRLSKPQRLALLAYGVSLGGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHcc-ccChhhHHHHHHHHHHHHHHHHh----hHHH-hccChhhhHHHHHHHHHHHHHHH
Confidence 567777776666666778888788 79999999999999999986543 2333 45889999999999999999999
Q ss_pred HHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchh
Q 018256 85 FHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLIN 164 (359)
Q Consensus 85 ~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~ 164 (359)
+||.+++.+|.+.+..+.++-|+...+++- .|.. +.+-+.+++.|..++. ..++.
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr~~--------d~vwvaLAvlGi~lL~-p~~~~------------ 141 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RRLR--------DFVWVALAVLGIWLLL-PLGQS------------ 141 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc----cchh--------hHHHHHHHHHHHHhhe-eccCC------------
Confidence 999999999999999999999998888742 3333 8888899999998884 22221
Q ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCC-CCcccccCchhHH
Q 018256 165 ELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIELM 243 (359)
Q Consensus 165 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 243 (359)
....+..|..+++.++.+|+.|.+..||..+..+ ...-+...+.++.++..|+......+ ...+. -..
T Consensus 142 -----~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~-----ll~ 210 (292)
T COG5006 142 -----VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGPALFSPS-----LLP 210 (292)
T ss_pred -----cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcchhhcChH-----HHH
Confidence 2445678999999999999999999999886655 77788999999999999998733222 22222 244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256 244 AIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE 321 (359)
Q Consensus 244 ~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~ 321 (359)
.-+..+++++.+.|.+.+.+++|.+..+.+.+..+||.++.+.|++++||++|..||+|.++|+++..-..+..+|+.
T Consensus 211 laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~ 288 (292)
T COG5006 211 LALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA 288 (292)
T ss_pred HHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence 556778999999999999999999999999999999999999999999999999999999999988776666555543
No 15
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.91 E-value=6.3e-22 Score=173.84 Aligned_cols=280 Identities=12% Similarity=0.070 Sum_probs=222.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC--CCCHHHHHHHHHHHHHHH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP--QLTWSIVCRIFLLGLLSC 80 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~ 80 (359)
.++++..+.+.++||..+...|. ++ ..++.++...|..-+..++..+....++.+... ..+++.+....+.+++..
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kl-l~-~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~ 83 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKL-LE-PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG 83 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHH-Hc-cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 57899999999999999999998 67 799999999999999988877665554432211 234566677778888889
Q ss_pred HHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcc
Q 018256 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKN 160 (359)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~ 160 (359)
.+..+|.+|.++..+-++++-++..|++.++++++++|||+| +.|+++++++.+||.......|+
T Consensus 84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls------~~Q~iAV~lA~~GV~~~~~~~g~--------- 148 (293)
T COG2962 84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLS------RLQWIAVGLAAAGVLIQTWLLGS--------- 148 (293)
T ss_pred HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhcc------HHHHHHHHHHHHHHHHHHHHcCC---------
Confidence 999999999999999999999999999999999999999999 77999999999999998765421
Q ss_pred cchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCch
Q 018256 161 KLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDI 240 (359)
Q Consensus 161 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (359)
-.+ ..+.=+++|+.|..+.|+. +.+ +.+-...-.+.-.+......+..+....-....+..
T Consensus 149 ------------lpw----val~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~ 209 (293)
T COG2962 149 ------------LPW----VALALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANS 209 (293)
T ss_pred ------------CcH----HHHHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCch
Confidence 222 3445568999999888855 344 444444444444444444444333322111112334
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256 241 ELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 241 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~ 319 (359)
.+..+...|. .|.++..+|..+-++.+-+..+.++|.+|....+++++++||+++..+++..++|-.|..++.++.-+
T Consensus 210 ~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~ 287 (293)
T COG2962 210 LWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLY 287 (293)
T ss_pred HHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5777777787 68899999999999999999999999999999999999999999999999999999999999976544
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.89 E-value=1.1e-24 Score=187.20 Aligned_cols=291 Identities=14% Similarity=0.145 Sum_probs=219.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018256 6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMF 85 (359)
Q Consensus 6 ~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 85 (359)
..+.-+. ..+....++.+..++ .+|....-.|.+.-+++..|....++..-. .+.....+++++|+.|..+..+
T Consensus 40 l~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~---gp~g~R~~LiLRg~mG~tgvml 113 (346)
T KOG4510|consen 40 LLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI---GPEGKRKWLILRGFMGFTGVML 113 (346)
T ss_pred ceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeee---cCCCcEEEEEeehhhhhhHHHH
Confidence 3344444 455555555555344 699999999987777766553333332221 1223336788999999999999
Q ss_pred HHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhh
Q 018256 86 HYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINE 165 (359)
Q Consensus 86 ~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~ 165 (359)
.|+|++|++.++|+++.+++|.|+.+++|.++|||.+ +.+.+|..+.+.|+++++ + |.+-..++.+ +
T Consensus 114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t------~~eaL~s~itl~GVVLIv--R-PpFlFG~~t~----g 180 (346)
T KOG4510|consen 114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFT------KFEALGSLITLLGVVLIV--R-PPFLFGDTTE----G 180 (346)
T ss_pred HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCc------HHHHHHHHHhhheEEEEe--c-CCcccCCCcc----c
Confidence 9999999999999999999999999999999999999 779999999999999984 1 1111110000 0
Q ss_pred hccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHH
Q 018256 166 LVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAI 245 (359)
Q Consensus 166 ~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (359)
.+.+.......|.+.++.+.++-|--+++.|+..|+.+ ....+.|..+++.+.+.+.....+.. .++.. ..+|+.+
T Consensus 181 ~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig~~--~lP~c-gkdr~l~ 256 (346)
T KOG4510|consen 181 EDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIGAV--QLPHC-GKDRWLF 256 (346)
T ss_pred cccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhccce--ecCcc-ccceEEE
Confidence 00111345567888999999988888899999988887 77778888888888877776544321 22222 1246667
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCccc
Q 018256 246 GYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKE 320 (359)
Q Consensus 246 ~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~ 320 (359)
+.+|+ ..++++.+.+.++|+..+..++++.+.+.+++.++..+++++.|+++.|+|+++|+.+.+.....|..+
T Consensus 257 ~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa~ 330 (346)
T KOG4510|consen 257 VNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWAG 330 (346)
T ss_pred EEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHhc
Confidence 77787 466899999999999999999999999999999999999999999999999999999988888665444
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.89 E-value=2.4e-21 Score=177.93 Aligned_cols=275 Identities=15% Similarity=0.129 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018256 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM 84 (359)
Q Consensus 5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (359)
++++.++++++||.+.+..|. .. +.++.+.. |..++.+++..+....++++ +..++.+...++.|++...++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~-~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~---~~~~~~~~~g~l~G~~w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVK-IG-GGPYSQTL--GTTFGALILSIAIAIFVLPE---FWALSIFLVGLLSGAFWALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhc-cC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCc---ccccHHHHHHHHHHHHHHhhhh
Confidence 478889999999999999998 44 77887775 77777777665554433211 1224555666777777799999
Q ss_pred HHHHHhccCCcchhhhhhc-cchHHHHHHHHHHhhccccceecccccc----chhHHHHHhHHHHHHhhcCCCCCCCCCc
Q 018256 85 FHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAK----SFGTVLLIGGALIVTLYKGLPITSAPSK 159 (359)
Q Consensus 85 ~~~~al~~~~~~~a~~l~~-~~Pi~~~lls~l~~~E~~~~~~~~~~~~----~~g~~l~~~Gv~ll~~~~~~~~~~~~~~ 159 (359)
+++.++++++.+.+..+.+ +.+++..+.+.+++|||.+.+ + .+|++++++|++++...++++..
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~----- 143 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG----- 143 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc-----
Confidence 9999999999999999988 888999999999999999954 7 99999999998887432211100
Q ss_pred ccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHH---HHHHHHHHHHHHhcCCCCcccc
Q 018256 160 NKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSI---FVTILSSAVSLVAEKNPNAWRL 236 (359)
Q Consensus 160 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 236 (359)
.++..+...|.+++++++++|+.|.+..|+. +++ +...++.+.. +++.+..... . .. .++
T Consensus 144 --------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~--~-~~-~~~-- 206 (290)
T TIGR00776 144 --------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH--I-LA-KPL-- 206 (290)
T ss_pred --------cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH--h-cc-cch--
Confidence 0000234679999999999999999999976 355 7777444443 3333222221 1 00 111
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHh-cCCcceeeeccchhhHHHHHHHHHHhcCccchhhH----HHHHHHHHHHH
Q 018256 237 RPDIELMAIGYSAIFAVSVRSVFHTWALR-KKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSF----VGAATIALGFY 311 (359)
Q Consensus 237 ~~~~~~~~~~~~g~~~~~~~~~~~~~~l~-~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~----iG~~lii~gi~ 311 (359)
.+...+..+ ..|++ ..+++.+|..+.+ +.++++.+.+...+|+.+.+++++++||..++.++ +|+++|+.|+.
T Consensus 207 ~~~~~~~~~-~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~ 284 (290)
T TIGR00776 207 KKYAILLNI-LPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN 284 (290)
T ss_pred HHHHHHHHH-HHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence 111223334 47887 7999999999999 99999999999999999999999999999999999 99999999998
Q ss_pred HHHhc
Q 018256 312 AVIWG 316 (359)
Q Consensus 312 l~~~~ 316 (359)
+....
T Consensus 285 l~~~~ 289 (290)
T TIGR00776 285 ILGIG 289 (290)
T ss_pred HHhcc
Confidence 87654
No 18
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.81 E-value=1.4e-18 Score=156.77 Aligned_cols=233 Identities=17% Similarity=0.223 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCC
Q 018256 72 IFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGL 151 (359)
Q Consensus 72 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~ 151 (359)
.+..-.+.++.++.++.|+.+++++..+++.+++.+|+..++.++.+||+| +.|++++.+.+.|++++.+++..
T Consensus 162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft------~sKllav~~si~GViiVt~~~s~ 235 (416)
T KOG2765|consen 162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFT------LSKLLAVFVSIAGVIIVTMGDSK 235 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhh------HHHHHHHHHhhccEEEEEecccc
Confidence 334444449999999999999999999999999999999999999999999 45999999999999999776533
Q ss_pred CCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC---CchHHHHHHHHHHHHHHHHHHHHhc
Q 018256 152 PITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP---AELMVTLICSIFVTILSSAVSLVAE 228 (359)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (359)
+.+ ........+|+++++++++.||.|.++.||...+.+ |--.+..+.-++..++++|..++..
T Consensus 236 ~~~-------------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~ 302 (416)
T KOG2765|consen 236 QNS-------------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILD 302 (416)
T ss_pred ccc-------------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 311 113456689999999999999999999998765542 1223334444555556655544322
Q ss_pred C-CCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHH
Q 018256 229 K-NPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIA 307 (359)
Q Consensus 229 ~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii 307 (359)
. ..+.+..+.......++..++++++++-++|.++.-..+|..+++-+.++.+.+++.+.++-|.++++.+++|.+.|+
T Consensus 303 ~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~If 382 (416)
T KOG2765|consen 303 FFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIF 382 (416)
T ss_pred HhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 1 222333333334455667778899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcccccc
Q 018256 308 LGFYAVIWGQAKEEKM 323 (359)
Q Consensus 308 ~gi~l~~~~~~~~~~~ 323 (359)
+|.+.++..++...++
T Consensus 383 v~Fv~vn~~~~~~~~~ 398 (416)
T KOG2765|consen 383 VGFVIVNISSENSKKD 398 (416)
T ss_pred HHHhheeccccccccc
Confidence 9999999876544333
No 19
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.81 E-value=3.1e-17 Score=151.98 Aligned_cols=267 Identities=13% Similarity=0.154 Sum_probs=207.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHH
Q 018256 33 HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFIL 112 (359)
Q Consensus 33 p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~ll 112 (359)
|..+++..++...+.-.+.....+ + ++.++..++.++..+++..++..+.+.|++|++.+.-.++..+.|++++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~ 107 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFILLSLFK-F---PKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMIL 107 (303)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcc-c---cCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence 888888888887776655443333 1 223344457778889999999999999999999999999999999999999
Q ss_pred HHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHH
Q 018256 113 AIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYY 192 (359)
Q Consensus 113 s~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~ 192 (359)
+.+++|+|.+++ +++++++..+|+++....+...... ..+....+..|+++++++.++.|...
T Consensus 108 ~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~-----------~~~~~~~~~~G~~ll~~sl~~~a~~~ 170 (303)
T PF08449_consen 108 GVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSS-----------SNSSSFSSALGIILLLLSLLLDAFTG 170 (303)
T ss_pred HHHhcCccccHH------HHHHHHHHHhhHheeeecccccccc-----------cccccccchhHHHHHHHHHHHHHHHH
Confidence 999999999955 9999999999999986554322111 01112233459999999999999999
Q ss_pred HHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHH--hcCCCCccc--ccCchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018256 193 IVQAWIVRDY-PAELMVTLICSIFVTILSSAVSLV--AEKNPNAWR--LRPDIELMAIGYSAIFAVSVRSVFHTWALRKK 267 (359)
Q Consensus 193 vl~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 267 (359)
+.++|..+++ .++.+.+++.+.++.+...+..+. .++....+. ...+..+..++...+ +..++..+.++..++.
T Consensus 171 ~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~ 249 (303)
T PF08449_consen 171 VYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKF 249 (303)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 9999988664 346789999999999988888876 333222111 111113444444444 5566777777889999
Q ss_pred CcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256 268 GPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE 321 (359)
Q Consensus 268 ~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~ 321 (359)
++...+++..+.-+++++++++++|+++++.+|+|.++++.|..+..+.++|++
T Consensus 250 ~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 250 SALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred CchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 999999999999999999999999999999999999999999999999888764
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.73 E-value=3.8e-17 Score=148.81 Aligned_cols=275 Identities=13% Similarity=0.111 Sum_probs=211.0
Q ss_pred HHHHHHHHh--CCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcch
Q 018256 20 NTVTKAAMS--RGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPAL 97 (359)
Q Consensus 20 ~~~~k~~~~--~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~ 97 (359)
....|+.++ +.--|..++..+...+.+.+.....+...+.. +..++..++..+..|++.+.+..+-+.++++.+++.
T Consensus 33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~-~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF 111 (316)
T KOG1441|consen 33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPS-KISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSF 111 (316)
T ss_pred EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCC-ccccccchHHHHHHHHHHHHHHHhcchhhhccchhH
Confidence 356788777 45668888888777777666554444333332 222456678889999999999999999999999999
Q ss_pred hhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHH
Q 018256 98 ASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIG 177 (359)
Q Consensus 98 a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 177 (359)
...+..++|+++.++++++.+|+.+++ ..+.++..+.|+.+.+..+ ......|
T Consensus 112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~~e---------------------~~fn~~G 164 (316)
T KOG1441|consen 112 YQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASVTE---------------------LSFNLFG 164 (316)
T ss_pred HHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeeecc---------------------ccccHHH
Confidence 999999999999999999999999955 7788888888888774322 3455789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---CCCchHHHHHHHHHHHHHHH-HHHHHhcCCCC-cccc-cCchhHHHHHHHHHH
Q 018256 178 GIFLAAHSVILAIYYIVQAWIVRD---YPAELMVTLICSIFVTILSS-AVSLVAEKNPN-AWRL-RPDIELMAIGYSAIF 251 (359)
Q Consensus 178 ~~~~l~a~~~~a~~~vl~k~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-~~~~~~~~~~~~g~~ 251 (359)
.+.++++.+.++..+++.|+..++ .-|++....++.-++.+.++ |+....+++.. .+.. .++......++..+
T Consensus 165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv- 243 (316)
T KOG1441|consen 165 FISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSV- 243 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHH-
Confidence 999999999999999999998742 23489999999999999888 77765555433 0000 11111222222222
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccc
Q 018256 252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKM 323 (359)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~ 323 (359)
....-...-+..+.+++|.+.++.+.+.-++.++.++++++|+.++.+..|+++.++|++++.+.|.+++++
T Consensus 244 ~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~ 315 (316)
T KOG1441|consen 244 LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG 315 (316)
T ss_pred HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 222223344578999999999999999999999999999999999999999999999999999988776543
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.66 E-value=8.7e-16 Score=118.23 Aligned_cols=135 Identities=14% Similarity=0.172 Sum_probs=122.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ 83 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (359)
...++.++++++||...++.|..++ ++||...++.|.....+.+..+++..++.+.....+.|.+....+.|+.+.++.
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glsw 81 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSW 81 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHH
Confidence 3467889999999999999999888 899999999999999998888877777666533457888888999998889999
Q ss_pred HHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 84 ~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
.+||.|++...++....+..+.|+++.+++++++|||+|.+ +++|+.+..+|++++
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailv 137 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeE
Confidence 99999999999999999999999999999999999999965 999999999999876
No 22
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.65 E-value=1.7e-14 Score=122.44 Aligned_cols=262 Identities=13% Similarity=0.104 Sum_probs=202.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHH
Q 018256 33 HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFIL 112 (359)
Q Consensus 33 p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~ll 112 (359)
...++++....-.++.-.+..++++ .+ .+....+.+..++.-..+.+...+.|++|.|-....+-.++-|+=++++
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir~~-~~---~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIRKK-TE---IDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeeccc-cc---ccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 4455666666655554333333332 22 3333335566666666888899999999999999999999999999999
Q ss_pred HHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHH
Q 018256 113 AIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYY 192 (359)
Q Consensus 113 s~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~ 192 (359)
+.++.+++-+|+ +...+++.++|+.+. +++..... +..+.....|.++.+++-..-+...
T Consensus 129 GVl~~~KsY~w~------kY~cVL~IV~GValF-mYK~~Kv~-------------g~e~~t~g~GElLL~lSL~mDGlTg 188 (337)
T KOG1580|consen 129 GVLFAHKSYHWR------KYCCVLMIVVGVALF-MYKENKVG-------------GAEDKTFGFGELLLILSLAMDGLTG 188 (337)
T ss_pred ehhhhcccccHH------HHHHHHHHHHHHHHh-hccccccC-------------CCcccccchHHHHHHHHHHhcccch
Confidence 999999999965 999999999999998 55533222 2235566789999999988888888
Q ss_pred HHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHHhcCCC--CcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018256 193 IVQAWIVRDY-PAELMVTLICSIFVTILSSAVSLVAEKNP--NAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGP 269 (359)
Q Consensus 193 vl~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~ 269 (359)
..+.+..+.+ +....++++.++.+++.+....++.++-+ ..+....+..|+-+..+++ ++++++++.+..+...+|
T Consensus 189 ~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgP 267 (337)
T KOG1580|consen 189 SIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGP 267 (337)
T ss_pred hHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCC
Confidence 8888776553 33567889999999998887776655532 2333333345777777787 899999999999999999
Q ss_pred ceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256 270 VYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 270 ~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~ 319 (359)
.+-|++....-.|+++.++++++.+++..||+|..+++.|...-....+|
T Consensus 268 LtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~ 317 (337)
T KOG1580|consen 268 LTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKK 317 (337)
T ss_pred eeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence 99999999999999999999999999999999999999998887765443
No 23
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.62 E-value=1.4e-13 Score=121.43 Aligned_cols=253 Identities=16% Similarity=0.199 Sum_probs=187.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCC--CCCCCHHHH-HHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHH
Q 018256 33 HFILVVYSNTLAIFLLVPSSFIFYRKRT--PPQLTWSIV-CRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFT 109 (359)
Q Consensus 33 p~~~~~~R~~~a~i~l~~~~~~~~~~~~--~~~~~~~~~-~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~ 109 (359)
|...+.+.+++-.++-......++++.. +.+++|++. ++....++.++....+.+++++|++.+.-++..+..++|+
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI 124 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI 124 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence 7777777776665555444433333322 136788775 5666788888999999999999999999999999999999
Q ss_pred HHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHH
Q 018256 110 FILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILA 189 (359)
Q Consensus 110 ~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a 189 (359)
.+++.++.-||++|. -..-+++..+|+++++ ++ +.+....|..+.++++++-+
T Consensus 125 llFs~if~lEk~~w~------L~l~v~lI~~Glflft-~K--------------------sTqf~i~Gf~lv~~aS~~sG 177 (349)
T KOG1443|consen 125 LLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFT-YK--------------------STQFNIEGFFLVLAASLLSG 177 (349)
T ss_pred HHHHHHHHhHHHHHH------HHHHHHHHhhheeEEE-ec--------------------ccceeehhHHHHHHHHHhhh
Confidence 999999999999943 5555555666666653 23 14455789999999988888
Q ss_pred HHHHHHHHHHhhC----CCchHHHHHHHHHHHHHHHHHHHHhcCCCC-----cccccCc-hhHHHHHHHHHHHHHHHHH-
Q 018256 190 IYYIVQAWIVRDY----PAELMVTLICSIFVTILSSAVSLVAEKNPN-----AWRLRPD-IELMAIGYSAIFAVSVRSV- 258 (359)
Q Consensus 190 ~~~vl~k~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~g~~~~~~~~~- 258 (359)
+...+.++.+++. ++|....+.......+.+++..+..|+... .|..... ..+..+.++++ +..+++.
T Consensus 178 lRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l 256 (349)
T KOG1443|consen 178 LRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLL 256 (349)
T ss_pred hhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHH
Confidence 8877777766653 368888888888888888888887776421 2222222 12333333333 2333333
Q ss_pred --HHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHH
Q 018256 259 --FHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAV 313 (359)
Q Consensus 259 --~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~ 313 (359)
.-...+.+++..+.++..-..-+-+.+++....+|+++...|+|..+...|+.+.
T Consensus 257 ~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 257 EFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 3345688899999999999999999999999999999999999999999999988
No 24
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.61 E-value=5.2e-13 Score=119.43 Aligned_cols=288 Identities=11% Similarity=0.062 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH--HHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018256 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVV--YSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCG 82 (359)
Q Consensus 5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~--~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 82 (359)
+....+.=++.--.+.++.|..++.+--|..+.. ++++...+++...- +.|-.+.++++++..+.++...++....
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk--~~~lv~~~~l~~~~~kk~~P~~~lf~~~ 90 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLK--RLGLVNFRPLDLRTAKKWFPVSLLFVGM 90 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH--HhceeecCCcChHHHHHHccHHHHHHHH
Confidence 3444444455555667888998875444555555 88877777664322 2333333678999999999999999999
Q ss_pred HHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccc
Q 018256 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKL 162 (359)
Q Consensus 83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~ 162 (359)
.+.-..+++|.++..-+++.+..|+++++...+++|.|++++ -+.++....+|.......+
T Consensus 91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~d------------- 151 (314)
T KOG1444|consen 91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFTD------------- 151 (314)
T ss_pred HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcccc-------------
Confidence 999999999999999999999999999999999999888844 7777777777766653211
Q ss_pred hhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHHhcCCC------Cccc
Q 018256 163 INELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDY-PAELMVTLICSIFVTILSSAVSLVAEKNP------NAWR 235 (359)
Q Consensus 163 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 235 (359)
......|..+++.+.++-+.+.+..|+..+.. -+.+..++|-.+.+.+.+.+...+.++.. ..|.
T Consensus 152 --------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~ 223 (314)
T KOG1444|consen 152 --------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWS 223 (314)
T ss_pred --------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhccccc
Confidence 23334599999999999999999999876542 23677889999999999988887666522 1121
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256 236 LRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW 315 (359)
Q Consensus 236 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~ 315 (359)
....+..+...++++.++.|.. .+..+..++++.++.+...-..+.+-+.+++|++.++...+|..+-+.|..++++
T Consensus 224 --~~~~~~~~~lScv~gf~isy~s-~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 224 --DSSVLVVMLLSCVMGFGISYTS-FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY 300 (314)
T ss_pred --chhHHHHHHHHHHHHHHHHHHH-HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence 1234677888888888887776 4678888999999999888888888888888899999999999999999999998
Q ss_pred cCccccccc
Q 018256 316 GQAKEEKMD 324 (359)
Q Consensus 316 ~~~~~~~~~ 324 (359)
.+.++++.+
T Consensus 301 ~~~~~k~~~ 309 (314)
T KOG1444|consen 301 ATFRKKKQP 309 (314)
T ss_pred hhhhhccCC
Confidence 876654433
No 25
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.57 E-value=2.2e-15 Score=129.31 Aligned_cols=250 Identities=14% Similarity=0.107 Sum_probs=195.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHH
Q 018256 32 SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFI 111 (359)
Q Consensus 32 ~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~l 111 (359)
.|..-.++-+..-+++-.++..++++. -+-.|+.+++.+++..-++++...|.||++...+.++.--.-..+.+
T Consensus 47 ~Pt~QtFl~Y~LLalVY~~~~~fR~~~------~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~ 120 (336)
T KOG2766|consen 47 APTSQTFLNYVLLALVYGPIMLFRRKY------IKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLV 120 (336)
T ss_pred CccHHHHHHHHHHHHHHhhHHHhhhHH------HHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHH
Confidence 477778888877778888777665522 12344568888888888899999999999999999999877778889
Q ss_pred HHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHH
Q 018256 112 LAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIY 191 (359)
Q Consensus 112 ls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~ 191 (359)
++|+++|.|-+ +.|+.|+.+|++|++++.+.+-.. + ...++.+...|+.+.++++-+||..
T Consensus 121 lsw~fLktrYr------lmki~gV~iCi~GvvmvV~sDV~a-g------------d~aggsnp~~GD~lvi~GATlYaVS 181 (336)
T KOG2766|consen 121 LSWFFLKTRYR------LMKISGVVICIVGVVMVVFSDVHA-G------------DRAGGSNPVKGDFLVIAGATLYAVS 181 (336)
T ss_pred HHHHHHHHHHh------hheeeeEEeEecceEEEEEeeecc-c------------cccCCCCCccCcEEEEecceeeeec
Confidence 99999999998 559999999999999985443111 1 1234567789999999999999999
Q ss_pred HHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCC-CCcccccCchhHHHHHHH-HHHHHHHHHHHHHHHHhcCCc
Q 018256 192 YIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIELMAIGYS-AIFAVSVRSVFHTWALRKKGP 269 (359)
Q Consensus 192 ~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~l~~~~~ 269 (359)
++..+...|+.+ ..+++....++|++++.+-.. .+.. ... ..++ +-...|+ ..++.++-|.+.-..+|..++
T Consensus 182 Nv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ~i-~~~~~~~t--l~w~--~~i~~yl~f~L~MFllYsl~pil~k~~~a 255 (336)
T KOG2766|consen 182 NVSEEFLVKNAD-RVELMGFLGLFGAIISAIQFI-FERHHVST--LHWD--SAIFLYLRFALTMFLLYSLAPILIKTNSA 255 (336)
T ss_pred cccHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHh-hhccceee--Eeeh--HHHHHHHHHHHHHHHHHHhhHHheecCCc
Confidence 999999999988 899999999999999988844 4332 221 1111 1222222 233556667777788999999
Q ss_pred ceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHH
Q 018256 270 VYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVI 314 (359)
Q Consensus 270 ~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~ 314 (359)
+...+-..+.-.++++. ..+|=+.+|...+..+.++.|.+++.
T Consensus 256 T~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 256 TMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS 298 (336)
T ss_pred eEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence 99999999999999998 56788899999999999999998884
No 26
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.56 E-value=1e-13 Score=106.88 Aligned_cols=136 Identities=20% Similarity=0.204 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHH
Q 018256 177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVR 256 (359)
Q Consensus 177 G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 256 (359)
..++++++++++++..+..|--.++.+ |..-++.+.++..+.+..+....++....-.. ....|..+...|+ .++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~-~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEI-GPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceeccccc-CcceehhhhHHHH-HHHHH
Confidence 457899999999999999999888887 88899999999988888887755443222111 2234788888886 89999
Q ss_pred HHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256 257 SVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW 315 (359)
Q Consensus 257 ~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~ 315 (359)
..+|+++++..+++.+..+.-++|+++++++++++||++|..+++|+++|.+|.+++.+
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999887654
No 27
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.55 E-value=1.7e-11 Score=111.37 Aligned_cols=298 Identities=13% Similarity=0.110 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHHHhhcc---CCCCCC------CHHHHHHHH
Q 018256 6 TAAMVTLEFLDVGLNTVTKAAMSRG---ASHFILVVYSNTLAIFLLVPSSFIFYRK---RTPPQL------TWSIVCRIF 73 (359)
Q Consensus 6 ~~~~l~~~~~~g~~~~~~k~~~~~~---~~p~~~~~~R~~~a~i~l~~~~~~~~~~---~~~~~~------~~~~~~~~~ 73 (359)
.+.++...+.++......|++-..+ ..|...++.--.+-.++.....+...|+ +..+.+ .+++..+..
T Consensus 17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~ 96 (345)
T KOG2234|consen 17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS 96 (345)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence 4566777788999999999976545 6688888887777776666555544322 111222 345667777
Q ss_pred HHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCC
Q 018256 74 LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPI 153 (359)
Q Consensus 74 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~ 153 (359)
+-+++.++.|.+.|.++.+.+++.-++...+.-+-|++++.+++++|+++ .||.+.++.+.|+.++-....+..
T Consensus 97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~------~Qw~Al~lL~~Gv~~vQ~~~~~~~ 170 (345)
T KOG2234|consen 97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSR------LQWMALVLLFAGVALVQLPSLSPT 170 (345)
T ss_pred HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHHhccCCCCC
Confidence 88888888888999999999999999999999999999999999999994 499999999999999852221110
Q ss_pred CCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-chHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 018256 154 TSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAVSLVAEKNPN 232 (359)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (359)
+ +.......+...|....+.+++.-+...++.+|..|+.+. ....+....+++.+..+...+..+....
T Consensus 171 ~----------a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i 240 (345)
T KOG2234|consen 171 G----------AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAI 240 (345)
T ss_pred C----------ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 0 0002235677899999999999999999999998876442 3444444556666666555554433211
Q ss_pred cccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018256 233 AWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYA 312 (359)
Q Consensus 233 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l 312 (359)
.|.- -...|-...+..++....+-.+-...+|+.+-..=.....+..+++.+.++.++|-++|....+|..+|+.++.+
T Consensus 241 ~~~g-ff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~l 319 (345)
T KOG2234|consen 241 NEYG-FFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFL 319 (345)
T ss_pred ccCC-ccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHH
Confidence 1110 001122222222233344444445556777766666677788999999999999999999999999999999999
Q ss_pred HHhcCccc
Q 018256 313 VIWGQAKE 320 (359)
Q Consensus 313 ~~~~~~~~ 320 (359)
+...+++.
T Consensus 320 Y~~~P~~~ 327 (345)
T KOG2234|consen 320 YSLYPARD 327 (345)
T ss_pred hhcCCccc
Confidence 99555543
No 28
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.51 E-value=7.6e-14 Score=111.55 Aligned_cols=123 Identities=22% Similarity=0.305 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHhcc
Q 018256 14 FLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIEN 92 (359)
Q Consensus 14 ~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~ 92 (359)
++||...++.|...+ +.||....++|+..+.+ +++.....+++.. ++.+++++......|++. ..++.+++.|+++
T Consensus 1 ~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 77 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK-KISPLSITFWRFLIAGI-LLILLLILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYALKY 77 (126)
T ss_pred ceeeeHHHHHHHHhc-cCCHHHHHHHHHHHHHH-HHHHHHhhccccc-cCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence 479999999999777 69999999999999998 6555555555443 457788888888999886 9999999999999
Q ss_pred CCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 93 GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 93 ~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
++++.++.+.++.|+++.+++++++|||++++ ++.|+++.+.|++++
T Consensus 78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 78 ISASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLI 124 (126)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999955 999999999999886
No 29
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.48 E-value=3.2e-12 Score=114.01 Aligned_cols=230 Identities=11% Similarity=0.151 Sum_probs=165.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHH
Q 018256 65 TWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALI 144 (359)
Q Consensus 65 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~l 144 (359)
++++..+..+-+++.++.+.+.+.++++.+++.-.++.++..++|++++++++|+|++ +.||.++.+.+.|+.+
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls------~~qW~aL~lL~~Gv~l 86 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLS------RRQWLALFLLVAGVVL 86 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccc------hhhHHHHHHHHHHHhe
Confidence 4677888889999999999999999999999999999999999999999999999999 4599999999999998
Q ss_pred HHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-chHHHHHHHHHHHHHHHHH
Q 018256 145 VTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAV 223 (359)
Q Consensus 145 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 223 (359)
+-..+....+..+ ..+............|.++.++++++-+...++.+|..|+.+. ...........+.+...+.
T Consensus 87 v~~~~~~~~~~~~----~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~ 162 (244)
T PF04142_consen 87 VQLSSSQSSDNSS----SSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLA 162 (244)
T ss_pred eecCCcccccccc----ccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 7433211100000 0000001124556899999999999999999999999888642 3444455556666666555
Q ss_pred HHHhcCCC-CcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHH
Q 018256 224 SLVAEKNP-NAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVG 302 (359)
Q Consensus 224 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG 302 (359)
....+... .+.... ..+-...+..++...++-.+....+|+.+...=........+.+.+.+++++|.+++....+|
T Consensus 163 ~~~~~~~~~~~~g~f--~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg 240 (244)
T PF04142_consen 163 LLLSDGSAISESGFF--HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG 240 (244)
T ss_pred HhcccccccccCCch--hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence 43322211 110000 011111222333444555566677899998888889999999999999999999999999999
Q ss_pred HHHH
Q 018256 303 AATI 306 (359)
Q Consensus 303 ~~li 306 (359)
+.+|
T Consensus 241 ~~~V 244 (244)
T PF04142_consen 241 AALV 244 (244)
T ss_pred eecC
Confidence 8753
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.43 E-value=4.9e-13 Score=106.85 Aligned_cols=125 Identities=18% Similarity=0.292 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 018256 186 VILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALR 265 (359)
Q Consensus 186 ~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~ 265 (359)
++||.+.+..|+..++.+ +....++++..+.+ ..+.....+... ....+...+...++.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 468899999999999877 99999999999998 666665444332 11122234677778888788999999999999
Q ss_pred cCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHH
Q 018256 266 KKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVI 314 (359)
Q Consensus 266 ~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~ 314 (359)
+.+++.++.+.+++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998875
No 31
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.27 E-value=5e-10 Score=97.94 Aligned_cols=277 Identities=15% Similarity=0.135 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHh---CCC----ChHHHHHHHHHHHHHHHHHHHHHhhccCCC--------------CCCCHHHHHHHH
Q 018256 15 LDVGLNTVTKAAMS---RGA----SHFILVVYSNTLAIFLLVPSSFIFYRKRTP--------------PQLTWSIVCRIF 73 (359)
Q Consensus 15 ~~g~~~~~~k~~~~---~~~----~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 73 (359)
.=+++.+++|++=+ ++- +|+......++.-+..++.+.+++.|.... +++++ ...+
T Consensus 14 sGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p---~lfl 90 (372)
T KOG3912|consen 14 SGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP---VLFL 90 (372)
T ss_pred hccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc---ceec
Confidence 34566788888622 233 377777777777777777777666654331 12333 2334
Q ss_pred HHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCC
Q 018256 74 LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPI 153 (359)
Q Consensus 74 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~ 153 (359)
.-.++-.++..+.|.|+.+++++.-+++-...-+|+.+++.-++|.+++ ..+|+|+.....|++.+...+-...
T Consensus 91 ~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~------~~qWl~i~fv~lGlviVg~~d~~~~ 164 (372)
T KOG3912|consen 91 PPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTIT------GRQWLGILFVSLGLVIVGSLDVHLV 164 (372)
T ss_pred ChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccc------hhhHHHHHHHHhhhheeeeeecccc
Confidence 4666778899999999999999999999999999999999999999999 5599999999999988743321111
Q ss_pred CCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHHhcC---
Q 018256 154 TSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDY-PAELMVTLICSIFVTILSSAVSLVAEK--- 229 (359)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 229 (359)
+. ...+.+....|+++.+++-+..|+-.++-+|..+++ -+|.....|.-+++.+++..++.....
T Consensus 165 ~~-----------p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~ 233 (372)
T KOG3912|consen 165 TD-----------PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPS 233 (372)
T ss_pred cC-----------CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheec
Confidence 11 011245678999999999999999999987766553 348999999999997766666543211
Q ss_pred --C--------CCcccc----cCchhHHHHHHHHHHHHHHHHHHHH----HHHhcCCcceeeeccchhhHHHHHHHHHHh
Q 018256 230 --N--------PNAWRL----RPDIELMAIGYSAIFAVSVRSVFHT----WALRKKGPVYVSMFKPLGMVVALVFGIAFL 291 (359)
Q Consensus 230 --~--------~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~----~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ 291 (359)
. .++|.. .......++...|. .++..+++ ...+..++++=.++..+...+-=+++..+.
T Consensus 234 ~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~---~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~ 310 (372)
T KOG3912|consen 234 GDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGF---TVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMG 310 (372)
T ss_pred CCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhh---hhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHH
Confidence 1 111100 00001223333333 33333333 235567777778888888888888889999
Q ss_pred cCccchhhHHHHHHHHHHHHHHH
Q 018256 292 GDTLYLGSFVGAATIALGFYAVI 314 (359)
Q Consensus 292 ge~~~~~~~iG~~lii~gi~l~~ 314 (359)
.|.+...|+.|.++.+.|+.++.
T Consensus 311 ~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 311 WEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988
No 32
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.26 E-value=3.3e-10 Score=100.39 Aligned_cols=269 Identities=13% Similarity=0.137 Sum_probs=201.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHH
Q 018256 32 SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFI 111 (359)
Q Consensus 32 ~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~l 111 (359)
++..+++...+.+.++-. .++..++..++ .++.++.+...++....+..+-+.|++|.+=-...+-..+--+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~--~~l~~~k~~~~--~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSY--AMLKWWKKELS--GVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHH--HHHhcccccCC--CCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 467777777777776653 33344333312 23445777788888899999999999999999888888888888999
Q ss_pred HHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHH
Q 018256 112 LAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIY 191 (359)
Q Consensus 112 ls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~ 191 (359)
+..++.+.|.+.+ +-+...+.-.|+.+..+.+.+... ...+..+...|..++...-+.-+..
T Consensus 126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s~------------~~~g~~ns~~G~~Ll~~~L~fDgfT 187 (327)
T KOG1581|consen 126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDSS------------SKSGRENSPIGILLLFGYLLFDGFT 187 (327)
T ss_pred HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCCc------------cccCCCCchHhHHHHHHHHHHHhhH
Confidence 9999999999954 888888888888777655322210 1113456788999999999999999
Q ss_pred HHHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHHhcCCCCc--ccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018256 192 YIVQAWIVRDY-PAELMVTLICSIFVTILSSAVSLVAEKNPNA--WRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKG 268 (359)
Q Consensus 192 ~vl~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~ 268 (359)
+..++++.+++ -++..++++.++++.+....-.+..+..... +....+..++-++.... +..+++.+.++.+++.|
T Consensus 188 n~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FG 266 (327)
T KOG1581|consen 188 NATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFG 266 (327)
T ss_pred HhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcc
Confidence 99999887763 2478889999999988887764322222221 11111123555555555 56688898899999999
Q ss_pred cceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccc
Q 018256 269 PVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKM 323 (359)
Q Consensus 269 ~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~ 323 (359)
+.+.+.++.+.-++++.++.+.+|.+++..||+|..+++.|+.+-...++|++.+
T Consensus 267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~~~~ 321 (327)
T KOG1581|consen 267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKKNQP 321 (327)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhccCc
Confidence 9999999999999999999999999999999999999999999988877764433
No 33
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.23 E-value=2.6e-10 Score=103.23 Aligned_cols=130 Identities=16% Similarity=0.152 Sum_probs=109.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASH--FILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS- 79 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p--~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 79 (359)
.++..+.++++++|+......|...+ +.++ .....+|+..+.+++.+..+..++.. ..+++++...+..|+++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVK-KEGPELLQFTGWVLLLGALLLLPFAWFLGPNP---QALSLQWGALLYLGLIGT 202 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhh-cCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC---CcchHHHHHHHHHHHHHH
Confidence 56888999999999999999999665 5564 45555789999888887765544332 24667777778888887
Q ss_pred HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHH
Q 018256 80 CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGA 142 (359)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv 142 (359)
..++.++++++++.+++.++.+.++.|+++.+++++++||+++. .++.|..+.+.|+
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~------~~~~G~~li~~g~ 259 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSL------PQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999994 4999999998886
No 34
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.19 E-value=5e-09 Score=93.41 Aligned_cols=251 Identities=16% Similarity=0.144 Sum_probs=170.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhc-cchHH
Q 018256 32 SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTW--SIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMID-LTPGF 108 (359)
Q Consensus 32 ~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~-~~Pi~ 108 (359)
+|.+-..--.+.+ +++....++..+ |.++. +.+...++.|++..+++...+.+.++.+++.+-.+.. .+-+.
T Consensus 11 ~~~~Q~lG~t~Ga-li~alv~~~~~~----p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg 85 (269)
T PF06800_consen 11 KPANQILGTTIGA-LIFALVVFLFRQ----PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVG 85 (269)
T ss_pred cHHHHHHHHHHHH-HHHHHHHHHHhC----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence 4444444433333 333334444444 44554 7788888999999999999999999999999999985 66677
Q ss_pred HHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHH
Q 018256 109 TFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVIL 188 (359)
Q Consensus 109 ~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~ 188 (359)
+.+.+.++++|.-+.+.+ .....++++.++|+.+....++++.. .+++.+...|....+++.+.|
T Consensus 86 ~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~~~-------------~~~~~~~~kgi~~Ll~stigy 150 (269)
T PF06800_consen 86 TSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKSDK-------------SSSKSNMKKGILALLISTIGY 150 (269)
T ss_pred HHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhccccccccc-------------cccccchhhHHHHHHHHHHHH
Confidence 889999999998874411 22455677778888776443322110 112456678999999999999
Q ss_pred HHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 018256 189 AIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKG 268 (359)
Q Consensus 189 a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~ 268 (359)
-.|.+..|. .+.+ +....+=+.+-..+...++....+....+ . ..|..+ ..|+ .-.++-.+|..+.++.+
T Consensus 151 ~~Y~~~~~~--~~~~-~~~~~lPqaiGm~i~a~i~~~~~~~~~~~--k---~~~~ni-l~G~-~w~ignl~~~is~~~~G 220 (269)
T PF06800_consen 151 WIYSVIPKA--FHVS-GWSAFLPQAIGMLIGAFIFNLFSKKPFFE--K---KSWKNI-LTGL-IWGIGNLFYLISAQKNG 220 (269)
T ss_pred HHHHHHHHh--cCCC-hhHhHHHHHHHHHHHHHHHhhcccccccc--c---chHHhh-HHHH-HHHHHHHHHHHhHHhcc
Confidence 999999774 3444 66665555444444444444322111111 1 113322 2333 34566777888999999
Q ss_pred cceeeeccchhhHHHHHHHHHHhcCccchh----hHHHHHHHHHHHHH
Q 018256 269 PVYVSMFKPLGMVVALVFGIAFLGDTLYLG----SFVGAATIALGFYA 312 (359)
Q Consensus 269 ~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~----~~iG~~lii~gi~l 312 (359)
....-.+.-+.++++.+.|.++++|+-+.. .++|.+++++|.++
T Consensus 221 ~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 221 VATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred chhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999987755 45788888888764
No 35
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.17 E-value=3.4e-10 Score=95.83 Aligned_cols=279 Identities=13% Similarity=0.149 Sum_probs=198.1
Q ss_pred HHHHHHHHHh-CCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q 018256 19 LNTVTKAAMS-RGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPA 96 (359)
Q Consensus 19 ~~~~~k~~~~-~~~~-p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~ 96 (359)
+..-.|+.++ .+.+ -+.+++.+.+...+.+..+-. .|- -.++.++.+.++..+++-....+.-..+++|.++.
T Consensus 21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~--l~~---~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vp 95 (309)
T COG5070 21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKF--LRL---VEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVP 95 (309)
T ss_pred HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHH--HhH---hheehhhhhhhcCHHHHHHHHHHhcccceeeeeee
Confidence 3444565443 2333 344455666655554433221 121 22334555677778887788888889999999999
Q ss_pred hhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhH
Q 018256 97 LASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTI 176 (359)
Q Consensus 97 ~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (359)
.-+++.++.-+..+..-.+++|.|++ -......++.+..-+.-...+-... .-.....+.
T Consensus 96 iYTiFKNltII~iAygEvl~Fgg~vt------sl~l~SFilMvlSS~va~w~D~q~~--------------~~~~~~lN~ 155 (309)
T COG5070 96 IYTIFKNLTIILIAYGEVLFFGGRVT------SLELLSFILMVLSSVVATWGDQQAS--------------AFKAQILNP 155 (309)
T ss_pred HHHHhccceeehhHhhHHHHhcCccc------hhhHHHHHHHHHHHHHhccchhhHH--------------HHHhcccCC
Confidence 99999999999999999999999999 6688877777766655432221000 001235567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--hCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCc---ccccCchhHHHHHHHHHH
Q 018256 177 GGIFLAAHSVILAIYYIVQAWIVR--DYPAELMVTLICSIFVTILSSAVSLVAEKNPNA---WRLRPDIELMAIGYSAIF 251 (359)
Q Consensus 177 G~~~~l~a~~~~a~~~vl~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~ 251 (359)
|.+++...++.-+.|....|+..+ +.. -...++|..+.+.++++.+..+.|+.... -... .....++...|+.
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~-~d~l~am~ISgl~ 233 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLS-VDSLMAMFISGLC 233 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCC-hHHHHHHHHHHHH
Confidence 999999999999999887776543 233 46679999999999999999877664222 1111 1235566777775
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccccc
Q 018256 252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMDE 325 (359)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~~~ 325 (359)
+.++.|. -.|.++..+.++.+++..+.-.-..+-|.+++||+.+...+....+-..+..++...+.+|++.++
T Consensus 234 svgiSy~-saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q~ 306 (309)
T COG5070 234 SVGISYC-SAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQK 306 (309)
T ss_pred Hhhhhhc-cceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5555554 478899999999999999999999999999999999999999988888888888877766554443
No 36
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.14 E-value=1.4e-10 Score=91.28 Aligned_cols=104 Identities=22% Similarity=0.382 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHHHhhccCC-CCCCCHHHHHHHHHHHHHH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHH
Q 018256 38 VYSNTLAIFLLVPSSFIFYRKRT-PPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAII 115 (359)
Q Consensus 38 ~~R~~~a~i~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l 115 (359)
.+|...+.+++..+...++|... .+..+++.+.+.+..|+++ ..++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 57888988888877766443211 0223334456667778888 699999999999999 58889999999999999999
Q ss_pred HhhccccceeccccccchhHHHHHhHHHHHHhh
Q 018256 116 FRMEKLELRVQSSQAKSFGTVLLIGGALIVTLY 148 (359)
Q Consensus 116 ~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~ 148 (359)
++|||++++ ++.+++++++|++++...
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIAWS 107 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHhhh
Confidence 999999955 999999999999999543
No 37
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.10 E-value=2.4e-10 Score=99.68 Aligned_cols=279 Identities=14% Similarity=0.084 Sum_probs=198.7
Q ss_pred HHHHHHHhC---CC-ChHHHHHHHHHHHHHHHHHHHHHhhcc----CC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 018256 21 TVTKAAMSR---GA-SHFILVVYSNTLAIFLLVPSSFIFYRK----RT-PPQLTWSIVCRIFLLGLLSCCGQMFHYFGIE 91 (359)
Q Consensus 21 ~~~k~~~~~---~~-~p~~~~~~R~~~a~i~l~~~~~~~~~~----~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~ 91 (359)
...|+.++. .. .|....++..+....+-..+-....+- .. ..+++.+..+.+...++...++....+++++
T Consensus 45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~ 124 (347)
T KOG1442|consen 45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLK 124 (347)
T ss_pred hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehh
Confidence 456665541 12 377777777776655544332221111 11 0235667777888888888888888999999
Q ss_pred cCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCC
Q 018256 92 NGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPL 171 (359)
Q Consensus 92 ~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
|.+++.--+--.+..+|+.+++++++|+|-+.. ...+..+.+.|-.+= . ++. +..+
T Consensus 125 yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lG-v---dqE--------------~~~~ 180 (347)
T KOG1442|consen 125 YVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLG-V---DQE--------------GSTG 180 (347)
T ss_pred hcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheehheec-c---ccc--------------cccC
Confidence 999999888889999999999999999999843 444444444442221 1 111 1124
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCccc--ccCc-hhHHHHHH
Q 018256 172 SNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWR--LRPD-IELMAIGY 247 (359)
Q Consensus 172 ~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~ 247 (359)
.-...|.+++..+.++-|+..+..||.....+ .-...+.|.++.+.+++.|...+.++-...+. ..+. ..|..+..
T Consensus 181 ~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtL 260 (347)
T KOG1442|consen 181 TLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTL 260 (347)
T ss_pred ccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHH
Confidence 45578999999999999999999997654433 34678889999999999999876655332222 2222 23556667
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCccccccc
Q 018256 248 SAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMD 324 (359)
Q Consensus 248 ~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~~ 324 (359)
.|+++..++|.. .+=+|..+|.+..+-..-.-..-.+++..+++|..+..-|-|-++|+.|-.++.+.|.++.++.
T Consensus 261 sglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~ 336 (347)
T KOG1442|consen 261 SGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKA 336 (347)
T ss_pred HHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhh
Confidence 777666666653 2447888999999998888888899999999999999999999999999999999877765544
No 38
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.08 E-value=1.9e-09 Score=99.66 Aligned_cols=140 Identities=13% Similarity=0.156 Sum_probs=110.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCccc--ccCchhHHHHHHHH
Q 018256 172 SNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWR--LRPDIELMAIGYSA 249 (359)
Q Consensus 172 ~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g 249 (359)
.+...|.+++++++++|+...+..|.. .+.+ |....++++.++.+.+.+......+ ..... ......+ .....+
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~ 79 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVS 79 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHH
Confidence 355689999999999999999999865 5666 9999999999998877666543321 11100 0011122 223355
Q ss_pred HHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256 250 IFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW 315 (359)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~ 315 (359)
.+..+..+.++++++++.++..++++.++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~ 145 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW 145 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 556778899999999999999999999999999999999999999999999999999999988764
No 39
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.07 E-value=1.9e-09 Score=89.52 Aligned_cols=138 Identities=12% Similarity=0.158 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh------CCCchHHHHHHHHHHHHHHHHHHHHhcCCCC-c--cccc------Cchh
Q 018256 177 GGIFLAAHSVILAIYYIVQAWIVRD------YPAELMVTLICSIFVTILSSAVSLVAEKNPN-A--WRLR------PDIE 241 (359)
Q Consensus 177 G~~~~l~a~~~~a~~~vl~k~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~------~~~~ 241 (359)
|.++++.+.++.|++.++.|+..++ ..++..+..+....+.+.+.+.....|+... . .... ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6789999999999999999987666 4468999999999999999999887766431 1 1110 1123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256 242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW 315 (359)
Q Consensus 242 ~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~ 315 (359)
+..++..|+. ........+..+++.+|.+.++...+..+..++.+++++||+++..+++|.++.++|.++++|
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 4445555553 445555667889999999999999999999999999999999999999999999999988764
No 40
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.05 E-value=7.8e-09 Score=97.54 Aligned_cols=138 Identities=12% Similarity=0.125 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCC---CCCCCHHHHHHHHHHHHHHHH
Q 018256 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRT---PPQLTWSIVCRIFLLGLLSCC 81 (359)
Q Consensus 5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~ 81 (359)
+.+++++++++|+...++.|....+.-++....++....+.+.+.+......+... ....+... ...+..++...+
T Consensus 190 G~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~i~y~~i~t~l 268 (358)
T PLN00411 190 GGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITL-ITIVTMAIITSV 268 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHH-HHHHHHHHHHHH
Confidence 66788899999999999999866633344455666666666555444444332111 01122222 223334544467
Q ss_pred HHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256 82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYK 149 (359)
Q Consensus 82 ~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~ 149 (359)
.+.++++++++.+++.++.+.++.|++++++++++++|++++. +++|.++.+.|++++...+
T Consensus 269 ay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 269 YYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWGK 330 (358)
T ss_pred HHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhhh
Confidence 8889999999999999999999999999999999999999954 9999999999999985443
No 41
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.04 E-value=5.3e-09 Score=95.91 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHH
Q 018256 178 GIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRS 257 (359)
Q Consensus 178 ~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 257 (359)
.++.++++++||..+++.|+..++.+ + ...+.....++...++..... ....|...+. .++.....+.......+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYL-AQVGWSRLPA-TFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhc-ccCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence 46788999999999999998776644 3 345556666666666554321 1122332222 23334444444677888
Q ss_pred HHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256 258 VFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 258 ~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
.++++++++.+++.++++.++.|+++.+++++++||+++..+++|.++++.|+.+....
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999999999999999999999999999988753
No 42
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.02 E-value=1.1e-08 Score=94.39 Aligned_cols=134 Identities=13% Similarity=0.110 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG 82 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 82 (359)
.+.++.++++++|+...+..|+..+ +.++...... .+.+.+++.++...... . ...++..+...+..|++. .+.
T Consensus 148 ~G~ll~l~aa~~~a~~~v~~r~~~~-~~~~~~~~~~-~~~~~~~l~~~~~~~~~--~-~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 148 TGAALALGAGACWAIYILSGQRAGA-EHGPATVAIG-SLIAALIFVPIGALQAG--E-ALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHH-HHHHHHHHHHHHHHccC--c-ccCCHHHHHHHHHHHHHHHHHH
Confidence 4778999999999999999999544 6777776544 45566666665544322 1 234555555566788888 899
Q ss_pred HHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhh
Q 018256 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLY 148 (359)
Q Consensus 83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~ 148 (359)
+.++++++++.+++.++.+.+++|+++.++++++++|+++ ..+++|..+.+.|++.....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~------~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLT------LIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCc------HHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999 55999999999999888554
No 43
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.00 E-value=9.8e-09 Score=94.68 Aligned_cols=136 Identities=14% Similarity=0.027 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CC 81 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 81 (359)
..+.+..++++++|+......|. ... -++.....++...+.+++.+.......... ...+.+.+...+..|+++ ..
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~i~~s~~ 225 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSR-LPL-PVGMMAGAAEMLAAGVVLLIASLLSGERLT-ALPTLSGFLALGYLAVFGSII 225 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-cCC-CcchHHHHHHHHHHHHHHHHHHHHcCCccc-ccCCHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999998 342 245566778888888877766544322211 113556777888888887 89
Q ss_pred HHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256 82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (359)
Q Consensus 82 ~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~ 147 (359)
++.++++++++.+++.++.+.++.|+++++++++++||++++ .+++|..+.+.|++++..
T Consensus 226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~------~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSP------IEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcH------HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999994 499999999999988743
No 44
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.99 E-value=3.1e-07 Score=85.22 Aligned_cols=299 Identities=12% Similarity=0.036 Sum_probs=178.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHHHHH--HHHhhcc--CCCCCCCHHHHHHHHHHH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGAS--HFILVVYSNTLAIFLLVPS--SFIFYRK--RTPPQLTWSIVCRIFLLG 76 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~--p~~~~~~R~~~a~i~l~~~--~~~~~~~--~~~~~~~~~~~~~~~~~g 76 (359)
..+++..++++++||..++-.|. .. ..+ .++.+. ..++.+ +.|+ ..+..+. ....+.+.+.+...++.|
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k-~w~wE~~W~v~--gi~~wl-~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G 80 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VK-KWSWETMWSVG--GIFSWL-ILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG 80 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cC-CCchhHHHHHH--HHHHHH-HHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence 45788999999999999999998 33 233 222211 111111 1111 1111110 000235677788888999
Q ss_pred HHHHHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccc---cceeccccccchhHHHHHhHHHHHHhhcCCC
Q 018256 77 LLSCCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKL---ELRVQSSQAKSFGTVLLIGGALIVTLYKGLP 152 (359)
Q Consensus 77 ~~~~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~---~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~ 152 (359)
++...++..++.++++.+.+.+..+. .++-++..++..++++|-. + +.......+|+++.++|+++........
T Consensus 81 ~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~--t~~g~~~~~gv~liliGi~l~s~Ag~~k 158 (345)
T PRK13499 81 ALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLA--TNGGRMTLLGVLVALIGVAIVGRAGQLK 158 (345)
T ss_pred HHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccc--cchHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999998887 5888999999999998754 2 1112347788889999998885421111
Q ss_pred CCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHH-------HHHHHHHhhCCCchHHHHHHHH---HHHHHHHH
Q 018256 153 ITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYY-------IVQAWIVRDYPAELMVTLICSI---FVTILSSA 222 (359)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------vl~k~~~~~~~~~~~~~~~~~~---~~~~~~~~ 222 (359)
... ...+.+.+.+...|.++++++++.++.|+ ...+...+...++.....-+.. .+..+.-.
T Consensus 159 ~~~--------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~ 230 (345)
T PRK13499 159 ERK--------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNL 230 (345)
T ss_pred ccc--------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 000 00000135677899999999999999999 4444322221123322222222 33332221
Q ss_pred -HHHH---hcCCCC-ccccc-Cchh---HHHHHHHHHHHHHHHHHHHHHHHhcCCcceeee---c-cchhhHHHHHHHHH
Q 018256 223 -VSLV---AEKNPN-AWRLR-PDIE---LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSM---F-KPLGMVVALVFGIA 289 (359)
Q Consensus 223 -~~~~---~~~~~~-~~~~~-~~~~---~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~---~-~~l~pi~~~i~~~~ 289 (359)
.... ...... ..... +... ...+..++-+.=.++..+|..+-++.+...... + +-+..+++.++|.+
T Consensus 231 ~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~ 310 (345)
T PRK13499 231 GFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV 310 (345)
T ss_pred HHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh
Confidence 1111 111111 01111 1011 111222222245567777888888776554443 3 36777999999995
Q ss_pred HhcCccc------hhhHHHHHHHHHHHHHHHhcC
Q 018256 290 FLGDTLY------LGSFVGAATIALGFYAVIWGQ 317 (359)
Q Consensus 290 ~~ge~~~------~~~~iG~~lii~gi~l~~~~~ 317 (359)
++|.=+ ...++|.+++++|..+....+
T Consensus 311 -lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~ 343 (345)
T PRK13499 311 -LKEWKGASRRPVRVLSLGCVVIILAANIVGLGN 343 (345)
T ss_pred -hhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 999766 566899999999999887654
No 45
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.99 E-value=2.2e-09 Score=89.36 Aligned_cols=212 Identities=15% Similarity=0.172 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCC
Q 018256 75 LGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPIT 154 (359)
Q Consensus 75 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~ 154 (359)
..++....++.|..|++.+++++++.+..+...|+.+++++.+|+|+. ..++++.++++.|++++...++
T Consensus 59 F~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~------~~kIlaailAI~GiVmiay~DN---- 128 (290)
T KOG4314|consen 59 FSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFM------GFKILAAILAIGGIVMIAYADN---- 128 (290)
T ss_pred eEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchh------hhhHHHHHHHhCcEEEEEeccc----
Confidence 344457889999999999999999999999999999999999999999 7799999999999998853331
Q ss_pred CCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHH-------HHHHHHHHh
Q 018256 155 SAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTI-------LSSAVSLVA 227 (359)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 227 (359)
.....+.|..++..+++.-|+|.++-|+...+.+ --....++...+.. ...++++
T Consensus 129 ---------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~-- 190 (290)
T KOG4314|consen 129 ---------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILAF-- 190 (290)
T ss_pred ---------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHHH--
Confidence 1334578999999999999999999998876633 22222222222221 1122222
Q ss_pred cCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHH
Q 018256 228 EKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIA 307 (359)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii 307 (359)
...++|+......|..+...+...... -.+.+.++.-..|...|+-+....+--...+.++-+-..+.....|..+|+
T Consensus 191 -T~VE~~qsFA~~PWG~l~G~A~L~lAF-N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~ 268 (290)
T KOG4314|consen 191 -TGVEHLQSFAAAPWGCLCGAAGLSLAF-NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIIC 268 (290)
T ss_pred -hchHHHHHHhhCCchhhhhHHHHHHHH-hhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122233321222377776655433322 234467788889999999999999999999998666677888899999999
Q ss_pred HHHHHHHhc
Q 018256 308 LGFYAVIWG 316 (359)
Q Consensus 308 ~gi~l~~~~ 316 (359)
.|..+....
T Consensus 269 i~FiLiiiP 277 (290)
T KOG4314|consen 269 IGFILIIIP 277 (290)
T ss_pred HhHHheecc
Confidence 999887754
No 46
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.97 E-value=8.8e-09 Score=93.13 Aligned_cols=137 Identities=13% Similarity=0.151 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCC---Ccccc-cCchhHHHHHHHHHH
Q 018256 176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP---NAWRL-RPDIELMAIGYSAIF 251 (359)
Q Consensus 176 ~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~g~~ 251 (359)
.|..+.++++++|+...+..|. ..+.+ +.+..+++++++.+.+.+......... ..++. .....+..+...|+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL- 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH-
Confidence 4788999999999999999997 45566 999999999999888766654332210 11110 11111333445555
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256 252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW 315 (359)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~ 315 (359)
..++.+.++++++++.++.+++.+.++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 3668889999999999999999999999999999999999999999999999999999987754
No 47
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.92 E-value=2.5e-08 Score=92.12 Aligned_cols=132 Identities=18% Similarity=0.206 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ 83 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (359)
.+.++++.++++|+...+..|.. .++.++..... ..+.+.+.+..... .... ...+++.+...+..|+...+.+
T Consensus 156 ~G~~~~l~aa~~~A~~~v~~k~~-~~~~~~~~~~~---~~~~~~l~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~t~~~~ 229 (295)
T PRK11689 156 LSYGLAFIGAFIWAAYCNVTRKY-ARGKNGITLFF---ILTALALWIKYFLS-PQPA-MVFSLPAIIKLLLAAAAMGFGY 229 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc-cCCCCchhHHH---HHHHHHHHHHHHHh-cCcc-ccCCHHHHHHHHHHHHHHHHHH
Confidence 36789999999999999999994 44677765432 22333333322222 2111 2356666767777775558899
Q ss_pred HHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256 84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (359)
Q Consensus 84 ~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~ 147 (359)
.++++++++.+++.++.+.++.|++..++++++++|++++ .+++|.++.+.|+++...
T Consensus 230 ~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~------~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 230 AAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSF------SFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999994 599999999999988743
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.92 E-value=2e-08 Score=80.31 Aligned_cols=123 Identities=14% Similarity=0.162 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHH
Q 018256 176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSV 255 (359)
Q Consensus 176 ~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 255 (359)
.|.++.+.+.++-+..+++-|+-.++.+ ....... . ....... .. -...++.|++++++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~-----~~~~~~~----------~~----p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F-----IAALLAF----------GL----ALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H-----HHHHHHH----------hc----cHHHHHHHHHHHHH
Confidence 4778899999999999999999887765 3221111 0 0000000 00 12256778889999
Q ss_pred HHHHHHHHHhcCCcceeeeccchhhHHHHHHHHH--HhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256 256 RSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIA--FLGDTLYLGSFVGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 256 ~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~--~~ge~~~~~~~iG~~lii~gi~l~~~~~~~ 319 (359)
++.+|.+++++.+++.+..+..+.++...+.++. ++||++|+.+++|+++|++|+++..+.++|
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999988888888777875 899999999999999999999998865443
No 49
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.91 E-value=9.9e-08 Score=87.79 Aligned_cols=275 Identities=16% Similarity=0.185 Sum_probs=151.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHH-HHHHHHHHHHH-H
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSI-VCRIFLLGLLS-C 80 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~-~ 80 (359)
..++.+.+.++++-+....+.|.+..+ .+. ... +.+ .. .++. ....++.|++. .
T Consensus 6 ~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~---------------~~~-~~----~~~~l~~~~W~~G~~~~~ 61 (300)
T PF05653_consen 6 YIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSL---------------RAG-SG----GRSYLRRPLWWIGLLLMV 61 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccc---------------ccc-ch----hhHHHhhHHHHHHHHHHh
Confidence 457778888888888888888875431 000 000 000 00 0111 12345566666 8
Q ss_pred HHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcc
Q 018256 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKN 160 (359)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~ 160 (359)
.+..+.+.|+.+.|.+..+.+..+.-++..+++..++|||+++ .++.|+.+++.|..++.... +......
T Consensus 62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~------~~~~G~~l~i~G~~liv~~~-~~~~~~~--- 131 (300)
T PF05653_consen 62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTR------RDIVGCALIILGSVLIVIFA-PKEEPIH--- 131 (300)
T ss_pred cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchH------hHHhhHHHHHhhheeeEEeC-CCCCCcC---
Confidence 8889999999999999999999999999999999999999994 49999999999998875443 2211110
Q ss_pred cchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH-------HHHHHhcCCCCc
Q 018256 161 KLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSS-------AVSLVAEKNPNA 233 (359)
Q Consensus 161 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 233 (359)
..++....-.+............ +...+.....+|..++ + .........++++.... .+....++ ..+
T Consensus 132 -t~~~l~~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~-~-i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g-~~~ 206 (300)
T PF05653_consen 132 -TLDELIALLSQPGFLVYFILVLV-LILILIFFIKPRYGRR-N-ILVYISICSLIGSFTVLSAKAISILIKLTFSG-DNQ 206 (300)
T ss_pred -CHHHHHHHhcCcceehhHHHHHH-HHHHHHHhhcchhccc-c-eEEEEEEeccccchhhhHHHHHHHHHHHHhcC-chh
Confidence 11111111111111112111111 1122222222222221 1 22112222222221111 11111111 111
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchh-hHHHHHHHHHHhcCc--cch----hhHHHHHHH
Q 018256 234 WRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLG-MVVALVFGIAFLGDT--LYL----GSFVGAATI 306 (359)
Q Consensus 234 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~-pi~~~i~~~~~~ge~--~~~----~~~iG~~li 306 (359)
+. ....|..++.. +.+......+.++++++.+++.+.++.+.. ...+++-|.++++|. .+. ....|..++
T Consensus 207 f~--~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~i 283 (300)
T PF05653_consen 207 FT--YPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLII 283 (300)
T ss_pred hh--hhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHH
Confidence 11 11123333222 334455556778999999999988886654 455666788889984 334 345778888
Q ss_pred HHHHHHHHhcCcc
Q 018256 307 ALGFYAVIWGQAK 319 (359)
Q Consensus 307 i~gi~l~~~~~~~ 319 (359)
+.|+++....|++
T Consensus 284 i~GV~lL~~~~~~ 296 (300)
T PF05653_consen 284 IIGVFLLSSSKDK 296 (300)
T ss_pred HHhhheeeccCch
Confidence 8998888655433
No 50
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.91 E-value=4.1e-08 Score=85.73 Aligned_cols=263 Identities=11% Similarity=0.062 Sum_probs=186.0
Q ss_pred CCCh--HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchH
Q 018256 30 GASH--FILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPG 107 (359)
Q Consensus 30 ~~~p--~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi 107 (359)
++.| +.+++.+++.-..+-+.-+...+ .++ +...| +.+...+.+......+.+-++-|.+-..-.++..+--+
T Consensus 70 gfkp~GWylTlvQf~~Ysg~glie~~~~~-~k~-r~iP~---rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKli 144 (367)
T KOG1582|consen 70 GFKPFGWYLTLVQFLVYSGFGLIELQLIQ-TKR-RVIPW---RTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLI 144 (367)
T ss_pred cCcccchHHHHHHHHHHHhhhheEEEeec-ccc-eecch---hHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhh
Confidence 5553 55666666554333221111111 111 23444 45556666667777788888889888888888877777
Q ss_pred HHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHH
Q 018256 108 FTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVI 187 (359)
Q Consensus 108 ~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~ 187 (359)
=+++.+.++.+.|-++ .+..+..+...|.++.++.|... +.+....|..+.-++-++
T Consensus 145 PVmiggifIqGkRY~v------~d~~aA~lm~lGli~FTLADs~~-----------------sPNF~~~Gv~mIsgALl~ 201 (367)
T KOG1582|consen 145 PVMIGGIFIQGKRYGV------HDYIAAMLMSLGLIWFTLADSQT-----------------SPNFNLIGVMMISGALLA 201 (367)
T ss_pred hhhheeeeeccccccH------HHHHHHHHHHHHHHhhhhccccc-----------------CCCcceeeHHHHHHHHHH
Confidence 7888889999988874 49999999999999987655322 244567898888888888
Q ss_pred HHHHHHHHHHHHhhCC-CchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCch---hHHHHHHHHHHHHHHHHHHHHHH
Q 018256 188 LAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDI---ELMAIGYSAIFAVSVRSVFHTWA 263 (359)
Q Consensus 188 ~a~~~vl~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~ 263 (359)
-|.-.-++++..+..+ +..++.++...++.+.++......++-...|..-... ...+.++.+. .+.++...-.-.
T Consensus 202 DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLal 280 (367)
T KOG1582|consen 202 DAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLAL 280 (367)
T ss_pred HHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHH
Confidence 8888888888777654 2467788888888888887777666655555432211 1233333333 344555555555
Q ss_pred HhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256 264 LRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE 321 (359)
Q Consensus 264 l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~ 321 (359)
++-.++..+..+....-.++++++++++..+++.+..-|..+|+.|+++..+.++.+.
T Consensus 281 I~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk~ 338 (367)
T KOG1582|consen 281 IKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNKI 338 (367)
T ss_pred HHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCCC
Confidence 7778999999999999999999999999999999999999999999999998874443
No 51
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.4e-08 Score=88.98 Aligned_cols=240 Identities=14% Similarity=0.090 Sum_probs=163.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhccC-CcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHh
Q 018256 62 PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENG-SPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIG 140 (359)
Q Consensus 62 ~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~-~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~ 140 (359)
|+.+.| .+...-.+.+..+.+.++++++- +...=.++-.-.++-+++++++++|.|-+. .|..++.+.-+
T Consensus 60 ~kiplk---~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~------~Qy~Sv~~iTi 130 (330)
T KOG1583|consen 60 PKIPLK---DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSL------RQYSSVLMITI 130 (330)
T ss_pred CCCchh---hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeeh------hhhhhHHhhhh
Confidence 444444 33444444577888889999886 444444555788999999999999999994 49999999999
Q ss_pred HHHHHHhhcCCCCCCCCCcccchh-hhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCchHHHHHHHHHHHH
Q 018256 141 GALIVTLYKGLPITSAPSKNKLIN-ELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDY-PAELMVTLICSIFVTI 218 (359)
Q Consensus 141 Gv~ll~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~-~~~~~~~~~~~~~~~~ 218 (359)
|+++.++.+.++... +.+..+ +...++...|..|+.+...+.+.-|.-.+.+++..+++ .++-+..+|.-..+.+
T Consensus 131 GiiIcTl~s~~d~~~---~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP 207 (330)
T KOG1583|consen 131 GIIICTLFSSKDGRS---KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLP 207 (330)
T ss_pred hheeEEeecCcchhh---hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccc
Confidence 999987765444322 111111 11233456778899888888888888888888776663 3477888888887777
Q ss_pred HHHHHHH--H------hcCC-----CCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHH
Q 018256 219 LSSAVSL--V------AEKN-----PNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALV 285 (359)
Q Consensus 219 ~~~~~~~--~------~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i 285 (359)
......= . ...+ ..... -+..|+.++.-.+ .+..+----+..-.+.++.++++...+.-.+..+
T Consensus 208 ~Flf~~~div~~~~~~~~se~~~~p~~g~~--vP~~~~yLl~n~L-~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl 284 (330)
T KOG1583|consen 208 LFLFMGDDIVSHWRLAFKSESYLIPLLGFK--VPSMWVYLLFNVL-TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLL 284 (330)
T ss_pred hHHHhcchHHHHHHHHhcCcceeccccCcc--ccHHHHHHHHHHH-HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHh
Confidence 6655430 0 0000 01111 1224555554333 2222221222334567889999999999999999
Q ss_pred HHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256 286 FGIAFLGDTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 286 ~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
++.+.++.++++.-|+|.+++..|..++...
T Consensus 285 ~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 285 FSIIYFENPFTPWHWLGAALVFFGTLLFANV 315 (330)
T ss_pred heeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988854
No 52
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.73 E-value=3.6e-07 Score=84.55 Aligned_cols=137 Identities=18% Similarity=0.163 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHHHHHHHHhhccCC----CCCCCHHHHHHHHHHHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGAS--HFILVVYSNTLAIFLLVPSSFIFYRKRT----PPQLTWSIVCRIFLLGL 77 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~--p~~~~~~R~~~a~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~ 77 (359)
.+.++.++++++|+...+..|....++-+ ......+-.+.+.+.+............ ....+.+.+...+..|+
T Consensus 143 ~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i 222 (299)
T PRK11453 143 LGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAF 222 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHH
Confidence 57889999999999999999985432212 2233333333433333222222222110 02356677788888888
Q ss_pred HH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHH
Q 018256 78 LS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (359)
Q Consensus 78 ~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~ 146 (359)
+. ...+.+++.++++.+++.++.+..+.|++..++++++++|+++ ..+++|..+.+.|+++..
T Consensus 223 ~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~------~~~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 223 VATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLT------GLQFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCcc------HHHHHHHHHHHHHHHHHh
Confidence 88 8999999999999999999999999999999999999999999 459999999999998763
No 53
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.70 E-value=4e-07 Score=75.44 Aligned_cols=134 Identities=18% Similarity=0.275 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC----------CHHH
Q 018256 5 VTAAMVTLEFLDVGLNTVTKAAMSR------GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL----------TWSI 68 (359)
Q Consensus 5 ~~~~~l~~~~~~g~~~~~~k~~~~~------~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~----------~~~~ 68 (359)
|..+.+.+.++.+...+..|..+.+ ..++..+..+-...+.+++.+..+..++....+.. +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 4577889999999999999998765 78999999999999999999887776554310100 2244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHH
Q 018256 69 VCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALI 144 (359)
Q Consensus 69 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~l 144 (359)
+...+..|++....+...+..++++++-..+++.....+++.++++++++|+++. .++.|+.+++.|+++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~------~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITP------LQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCH------HHHHHHHHHHHHHhe
Confidence 5566667777799999999999999999999999999999999999999999995 499999999999865
No 54
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.69 E-value=9.1e-08 Score=75.20 Aligned_cols=108 Identities=12% Similarity=0.225 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHH
Q 018256 211 ICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAF 290 (359)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~ 290 (359)
+...++.+.............+.+.......+...+..|+++...++.++.+++++.+ ..++.+..+.|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555544322111111111123555666677677789999999999999 588899999999999999999
Q ss_pred hcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256 291 LGDTLYLGSFVGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 291 ~ge~~~~~~~iG~~lii~gi~l~~~~~~~ 319 (359)
++|+++..+++|.+++.+|+.++.+.+..
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999987543
No 55
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.65 E-value=8.7e-08 Score=84.74 Aligned_cols=203 Identities=11% Similarity=0.075 Sum_probs=124.3
Q ss_pred cchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCC-----------CCCCCCcccch
Q 018256 95 PALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLP-----------ITSAPSKNKLI 163 (359)
Q Consensus 95 ~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~-----------~~~~~~~~~~~ 163 (359)
........+..++++++..+...++|.+ +.|+++.++...|++.-.+.+.+. ....+ +.++
T Consensus 4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~------~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~-~~~~- 75 (222)
T TIGR00803 4 VPIHIIFKQNNLVLIALGNLLAAGKQVT------QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMV-QSSA- 75 (222)
T ss_pred ccchHHHHhcchHHHHHhcccccceeee------hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecC-CCCc-
Confidence 3445666788999999999999999998 559999999998887542221100 00000 0000
Q ss_pred hhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHH-HHHHHHHHHHHHHHHHHHhcCCC-Cccc--ccCc
Q 018256 164 NELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMV-TLICSIFVTILSSAVSLVAEKNP-NAWR--LRPD 239 (359)
Q Consensus 164 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~ 239 (359)
......+...|....+.+.++-+...+++++..++.+..... .....+.+.+.........+.+. ..+. ...+
T Consensus 76 ---~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (222)
T TIGR00803 76 ---KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYP 152 (222)
T ss_pred ---cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCc
Confidence 000113456777777778887777788888776654311111 11111222221111111111111 1111 0101
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018256 240 IELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYA 312 (359)
Q Consensus 240 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l 312 (359)
...+.+ ++...++..+..+.+++.++...+....++++++.+++++++||+++..+++|+.+++.|+++
T Consensus 153 ~~~~~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 153 TAVWIV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred hHHHHH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 111111 124556667788889999999999999999999999999999999999999999999988765
No 56
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.62 E-value=2.5e-07 Score=85.75 Aligned_cols=139 Identities=19% Similarity=0.196 Sum_probs=103.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC-C-------CCHHHHHH-H
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSR-GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP-Q-------LTWSIVCR-I 72 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~-~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~-~-------~~~~~~~~-~ 72 (359)
..+.++.++++++|+...+..|...++ +.+|.....+....+.+.+.|+..........+ . ........ .
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence 347788999999999999999985442 589999999999999988888765443211000 0 01111111 2
Q ss_pred HHHHHHH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256 73 FLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (359)
Q Consensus 73 ~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~ 147 (359)
+..+... ...+.+++.+++++++..+++.....|++++++++++++|+++. .+++|..+.+.|+.+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~------~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISP------QQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCch------hHHHHHHHHHHHHHHHHH
Confidence 2333322 34446778899999999999999999999999999999999995 499999999999988743
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.48 E-value=4.1e-06 Score=79.20 Aligned_cols=137 Identities=14% Similarity=0.134 Sum_probs=99.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhccC----------CCCCCCH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSR------GASHFILVVYSNTLAIFLLVPSSFIFYRKR----------TPPQLTW 66 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~------~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~----------~~~~~~~ 66 (359)
+.+.+..++++++|+...+..|..+.+ ..++.....+-...++++++|+........ ......+
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 457889999999999999999996652 255766666667788888888765332110 0001111
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 67 SIV-CRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 67 ~~~-~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
... ...+..++...+.+.+.|.+++++++...++..++.|+++.++++++++|+++ ..+++|..+++.|+++.
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt------~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVT------LLGYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCc------hHhHHHHHHHHHHHHHH
Confidence 111 12222233335555556679999999999999999999999999999999999 55999999999999876
No 58
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.47 E-value=9.6e-07 Score=68.94 Aligned_cols=68 Identities=13% Similarity=0.077 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256 248 SAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW 315 (359)
Q Consensus 248 ~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~ 315 (359)
.++++.++++.++.+++++.+.+.+..+..+.++++.+.+++++||+++..+++|.+++++|+.+...
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34456788999999999999999999999999999999999999999999999999999999987653
No 59
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.47 E-value=2.9e-08 Score=85.58 Aligned_cols=280 Identities=16% Similarity=0.136 Sum_probs=179.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ 83 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (359)
..++..++-++.||....++.. . +-+|.+-..--.+.| +++....++..+ |..+.+.+..-++.|++...++
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k-~--GG~p~qQ~lGtT~GA-Lifaiiv~~~~~----p~~T~~~~iv~~isG~~Ws~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANK-F--GGKPYQQTLGTTLGA-LIFAIIVFLFVS----PELTLTIFIVGFISGAFWSFGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeee-c--CCChhHhhhhccHHH-HHHHHHHheeec----CccchhhHHHHHHhhhHhhhhh
Confidence 4678889999999999977665 2 345665555444344 444334444322 5577787888888888889999
Q ss_pred HHHHHHhccCCcchhhhhhc-cchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhcCCCCCCCCCcccc
Q 018256 84 MFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKL 162 (359)
Q Consensus 84 ~~~~~al~~~~~~~a~~l~~-~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~ 162 (359)
...+.|.++++++.+..+.+ ++-+-+-+++.+.++|-.+.... ....+++++.++|+.+-...+ +
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~~~-~----------- 139 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSKQD-R----------- 139 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeeeec-c-----------
Confidence 99999999999999999885 66677888899999987762100 112233344444444432111 1
Q ss_pred hhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhH
Q 018256 163 INELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIEL 242 (359)
Q Consensus 163 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (359)
++.+.++..+...|....+.+.+.|-.|.++.+... .+ ......-+..-..+..+.... ...+. . .....|
T Consensus 140 -~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~-g~saiLPqAiGMv~~ali~~~-~~~~~---~-~~K~t~ 210 (288)
T COG4975 140 -NNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VD-GLSAILPQAIGMVIGALILGF-FKMEK---R-FNKYTW 210 (288)
T ss_pred -ccccccChHhhhhheeeeeeeccceeeeEeeecccc--cc-chhhhhHHHHHHHHHHHHHhh-ccccc---c-hHHHHH
Confidence 111122355677899999999999999998887543 22 333332222222222222222 21111 1 111123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhh----HHHHHHHHHHHHHHHhc
Q 018256 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGS----FVGAATIALGFYAVIWG 316 (359)
Q Consensus 243 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~----~iG~~lii~gi~l~~~~ 316 (359)
..+ ..|+ .=..+-..+..+.++.+..+.-.+.-+..+.+.+-|.++++|+-|..+ ++|.+++++|..+....
T Consensus 211 ~ni-i~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~ 286 (288)
T COG4975 211 LNI-IPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIA 286 (288)
T ss_pred HHH-hhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhee
Confidence 333 2333 234566777788889998888888888999999999999999988765 57888888887766543
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.41 E-value=2.4e-06 Score=66.67 Aligned_cols=66 Identities=21% Similarity=0.295 Sum_probs=60.1
Q ss_pred HHHHHH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 74 LLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
..++++ .....++..++++.|.+.+..+.++.++++.+++++++|||++++ +++|+.+.+.|++++
T Consensus 41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHH
Confidence 344455 889999999999999999999999999999999999999999955 999999999999887
No 61
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.41 E-value=7.9e-06 Score=74.65 Aligned_cols=132 Identities=17% Similarity=0.205 Sum_probs=102.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-H
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVV-YSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-C 80 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~-~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~ 80 (359)
..+.++.+.++++|+...+..|... ..++..... +..........+.. ..... ...+.+.+......|+++ .
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~g~~~~~ 226 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFF--LSGFG--APILSRAWLLLLYLGVFSTG 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHH--hcccc--ccCCHHHHHHHHHHHHHHHH
Confidence 4688899999999999999999844 456666666 44332222222211 11111 235567788888899888 6
Q ss_pred HHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHH
Q 018256 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (359)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~ 146 (359)
.++.+++.+++..+++.++.+..+.|++..++++++++|+++ ..+++|.++.+.|+.+..
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~------~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLS------PAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCc------HHHHHHHHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999 459999999999988873
No 62
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.38 E-value=7.2e-06 Score=75.50 Aligned_cols=129 Identities=17% Similarity=0.128 Sum_probs=100.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH---HHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNT---LAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS 79 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~---~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 79 (359)
.+++...+++++.++......|.. +.+|...++.... ++..++.... ++ .+ |. +.+..+..++.|++.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~~-~~-~~-~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---IL-AK-PL-KKYAILLNILPGLMW 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---hc-cc-ch-HHHHHHHHHHHHHHH
Confidence 679999999999999999999973 3788887555443 3333332211 11 12 22 334444556688888
Q ss_pred HHHHHHHHHHhc-cCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccc----hhHHHHHhHHHHHH
Q 018256 80 CCGQMFHYFGIE-NGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKS----FGTVLLIGGALIVT 146 (359)
Q Consensus 80 ~~~~~~~~~al~-~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~----~g~~l~~~Gv~ll~ 146 (359)
...+.+++.+.+ +.+++.+..+.+..|+...+.+++++||+.+++ ++ +|.++.+.|+.++.
T Consensus 222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 999999999999 999999999999999999999999999999955 88 99999999988873
No 63
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.30 E-value=8.4e-06 Score=72.67 Aligned_cols=140 Identities=13% Similarity=0.180 Sum_probs=111.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCccc-ccCchhHHHHHHHHHHHH
Q 018256 175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWR-LRPDIELMAIGYSAIFAV 253 (359)
Q Consensus 175 ~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~ 253 (359)
..|.++++.+-+.|+.--.+.|-. +..+ +.++..++.+.+.+....+.........-++ ...+..+......++. -
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence 469999999999999987777754 5566 8999999999999988777765544322222 1222235555555553 4
Q ss_pred HHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcC
Q 018256 254 SVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQ 317 (359)
Q Consensus 254 ~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~ 317 (359)
......|.|+..+....++|.-.++.|.+.+++|.++++|+++..|++..++-.+|+....+..
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 4778999999999999999999999999999999999999999999999999999998877543
No 64
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.28 E-value=3.5e-06 Score=75.92 Aligned_cols=227 Identities=19% Similarity=0.181 Sum_probs=134.3
Q ss_pred HHHHHHHHH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256 71 RIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYK 149 (359)
Q Consensus 71 ~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~ 149 (359)
+.++.|++. .++....|.|..+.|.+..+.+..+.-++.++++..++|||++++ ..+|..++++|-.+++.+.
T Consensus 65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~ha 138 (335)
T KOG2922|consen 65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIHA 138 (335)
T ss_pred HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEec
Confidence 455678888 999999999999999999999999999999999999999999955 9999999999998886543
Q ss_pred CCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHH-------HH
Q 018256 150 GLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILS-------SA 222 (359)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 222 (359)
|......+..+. ...-.+...+.....+...++.=+ ...|+.. ...+.+.+.....++|+... ..
T Consensus 139 -P~e~~i~t~~el----~~~~~~~~Fliy~~~iil~~~il~--~~~~p~~-g~tnilvyi~i~s~iGS~tV~svKalg~a 210 (335)
T KOG2922|consen 139 -PKEQEIESVEEV----WELATEPGFLVYVIIIILIVLILI--FFYAPRY-GQTNILVYIGICSLIGSLTVMSVKALGIA 210 (335)
T ss_pred -CcccccccHHHH----HHHhcCccHHHHHHHHHHHHHHHh--eeecccc-cccceeehhhHhhhhcceeeeeHHHHHHH
Confidence 322211111111 010111111222222111111111 1112111 11124444444444442211 11
Q ss_pred HHHHhcC-CCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccch-hhHHHHHHHHHHhcCccc--h-
Q 018256 223 VSLVAEK-NPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPL-GMVVALVFGIAFLGDTLY--L- 297 (359)
Q Consensus 223 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l-~pi~~~i~~~~~~ge~~~--~- 297 (359)
+-....+ +.... ...|..++.... +...-.-..++|++..+++.++.+.+. -..++++-+.++++|.-. .
T Consensus 211 iklt~~g~~ql~~----~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~ 285 (335)
T KOG2922|consen 211 IKLTFSGNNQLFY----PLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDAL 285 (335)
T ss_pred HHHHhcCCccccc----HHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHH
Confidence 1111121 21111 123444443332 444445566799999999998888654 456667778899988433 2
Q ss_pred ---hhHHHHHHHHHHHHHHHhc
Q 018256 298 ---GSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 298 ---~~~iG~~lii~gi~l~~~~ 316 (359)
...+|+..++.|+.+....
T Consensus 286 ~i~~~~~Gf~ti~~G~flL~~~ 307 (335)
T KOG2922|consen 286 DIAGELCGFVTIFLGIFLLHRT 307 (335)
T ss_pred HHHHHHHhHHHhhheeeEeeee
Confidence 3568889999998888443
No 65
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.24 E-value=1.5e-05 Score=69.41 Aligned_cols=132 Identities=12% Similarity=0.040 Sum_probs=111.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG 82 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 82 (359)
.+..+.+.+..+|+..-+..|.+-. ..+...-+..-+++++++.+|+-.-..... -++++.....+..++++ ++.
T Consensus 148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~-~~~g~~g~a~gm~vAaviv~Pig~~~ag~~---l~~p~ll~laLgvavlSSalP 223 (292)
T COG5006 148 VGVALALGAGACWALYIVLGQRAGR-AEHGTAGVAVGMLVAALIVLPIGAAQAGPA---LFSPSLLPLALGVAVLSSALP 223 (292)
T ss_pred HHHHHHHHHhHHHHHHHHHcchhcc-cCCCchHHHHHHHHHHHHHhhhhhhhcchh---hcChHHHHHHHHHHHHhcccc
Confidence 4677888899999999999998553 456666677778899999999875444333 36778888888999999 999
Q ss_pred HHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
+.+-..++++.+...-+.+.++.|.+..+.++++++|+++.. ||.++...+.+..-.
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~ 280 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGS 280 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999955 999998888776544
No 66
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.24 E-value=1.7e-05 Score=73.77 Aligned_cols=140 Identities=11% Similarity=0.010 Sum_probs=108.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC--CHHHHHHHHHHHHHH
Q 018256 2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL--TWSIVCRIFLLGLLS 79 (359)
Q Consensus 2 ~~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 79 (359)
+.++=++++.+++++|.+.++.+.... +.++..+..+-.+.+.++..+.+...+++.. .++ +++....++..++..
T Consensus 166 ~i~GDll~l~~a~lya~~nV~~E~~v~-~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i-~~~~w~~~~~~~~v~~~~~l 243 (334)
T PF06027_consen 166 PILGDLLALLGAILYAVSNVLEEKLVK-KAPRVEFLGMLGLFGFIISGIQLAILERSGI-ESIHWTSQVIGLLVGYALCL 243 (334)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHHheehhhh-hccCCChhhHHHHHHHHHHH
Confidence 467778999999999999999998655 6788888888888888888777666665543 333 344333333333333
Q ss_pred HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256 80 CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYK 149 (359)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~ 149 (359)
+..+.+.-..++++++....+-..+..+++.+++++++|++++ +...+|.++.++|.++....+
T Consensus 244 f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~------~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 244 FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFS------WLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCcccc------HHHHHHHHHHHHHhheEEccC
Confidence 6667777788899999887777788899999999999999999 569999999999998875433
No 67
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.21 E-value=2.5e-05 Score=62.57 Aligned_cols=117 Identities=16% Similarity=0.146 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH-HHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG 82 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 82 (359)
++++++++..++-+..-++.|..++ ..+....... . ...+ .. . .++ ..++..|++. .+.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~-~~g~~~~~~~-~-~~~~----~~--~--------~~p---~~~i~lgl~~~~la 61 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMS-RLPLLSHAWD-F-IAAL----LA--F--------GLA---LRAVLLGLAGYALS 61 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHh-hCCCccchhH-H-HHHH----HH--H--------hcc---HHHHHHHHHHHHHH
Confidence 5778888888888999999999876 3333222111 1 0000 00 0 111 2346777777 999
Q ss_pred HHHHHHHhccCCcchhhhhhccchHHHHHHHHH--HhhccccceeccccccchhHHHHHhHHHHHH
Q 018256 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAII--FRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (359)
Q Consensus 83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l--~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~ 146 (359)
..++..++++.+.+.+..+....+.++.+.++. ++||+++++ +++|+++.++|++++.
T Consensus 62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence 999999999999999999999998888888874 899999955 9999999999999984
No 68
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.00 E-value=6e-05 Score=59.30 Aligned_cols=70 Identities=17% Similarity=0.357 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256 249 AIFAVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA 318 (359)
Q Consensus 249 g~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~ 318 (359)
.+...++++.++.+++++.+...+=.+ ..+.-+.+.+.+++++||++++.+++|..+|++|++......+
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 344667889999999999988776544 4678888999999999999999999999999999988866543
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.81 E-value=0.00022 Score=55.36 Aligned_cols=68 Identities=16% Similarity=0.193 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcC
Q 018256 250 IFAVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQ 317 (359)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~ 317 (359)
+.+.++++.++..++++.+.+.+=.. ..+.-+.+.+.+++++||++++.+++|..+|++|++......
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 44667889999999999888775444 557888889999999999999999999999999999987654
No 70
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.80 E-value=0.00033 Score=64.95 Aligned_cols=127 Identities=17% Similarity=0.204 Sum_probs=95.2
Q ss_pred HHHHHHHHHhhC-CC--chHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018256 191 YYIVQAWIVRDY-PA--ELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKK 267 (359)
Q Consensus 191 ~~vl~k~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 267 (359)
+.+++++..++. .. +..+++.++....+...+.......... . ...+......++ ...++..+-+.++++.
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~-~~~~~~~~~~~al~~i 88 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS--R---KIPLKKYAILSF-LFFLASVLSNAALKYI 88 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC--C---cChHHHHHHHHH-HHHHHHHHHHHHHHhC
Confidence 446677665542 22 6788888888888877776654431111 1 112333444444 5667778889999999
Q ss_pred CcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccc
Q 018256 268 GPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKM 323 (359)
Q Consensus 268 ~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~ 323 (359)
+.....+.....|+.+.+++++++|++.+..++++.+++.+|+.+....+.+..+.
T Consensus 89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~ 144 (303)
T PF08449_consen 89 SYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS 144 (303)
T ss_pred ChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence 99999999999999999999999999999999999999999999999876554433
No 71
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.80 E-value=6e-06 Score=72.36 Aligned_cols=140 Identities=9% Similarity=0.096 Sum_probs=96.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHH
Q 018256 171 LSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAI 250 (359)
Q Consensus 171 ~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 250 (359)
++...+|..+...+ ..+....++.++..++. |.......+++-..+..+..+....+ .|.......|+ ++=|+
T Consensus 33 ~d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~L--iLRg~ 105 (346)
T KOG4510|consen 33 KDKPNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWL--ILRGF 105 (346)
T ss_pred cCCCccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEE--Eeehh
Confidence 34567788888888 77788888888877664 45555555444444443333211111 11111111122 22233
Q ss_pred HHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256 251 FAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA 318 (359)
Q Consensus 251 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~ 318 (359)
.++ .+..+.++++++.+-+.++++.+..|++++++++++++|+.|....+|..+.+.|+++..+..-
T Consensus 106 mG~-tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 106 MGF-TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred hhh-hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 333 4556677899999999999999999999999999999999999999999999999999886543
No 72
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.64 E-value=0.00016 Score=66.60 Aligned_cols=123 Identities=20% Similarity=0.255 Sum_probs=88.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHH
Q 018256 172 SNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIF 251 (359)
Q Consensus 172 ~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 251 (359)
.++..|..+++.++++.+....++|+...+.+ ....-. .......-.+ ..|+. |+.
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~-~~~~~~-----------------~~~~~~~l~~---~~W~~---G~~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLP-RGSLRA-----------------GSGGRSYLRR---PLWWI---GLL 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccccc-----------------cchhhHHHhh---HHHHH---HHH
Confidence 45678999999999999999999998766644 100000 0000000000 11211 222
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256 252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA 318 (359)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~ 318 (359)
...++..+...++...+++.++.+..+..++..+++..+++|+++...++|+++++.|..+......
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~ 125 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP 125 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence 3345556677788889999999999999999999999999999999999999999999988775443
No 73
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.63 E-value=0.0011 Score=53.92 Aligned_cols=132 Identities=10% Similarity=0.074 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHH
Q 018256 177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVR 256 (359)
Q Consensus 177 G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 256 (359)
..++++.++++-++-..++.++.++..+|....+..+..+.+.+.+..++.++. .+......+|+..+ -|++ ....
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~l-G~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLL-GVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHH-HHHH
Confidence 356788889999999999999888877799999999999999998888776653 22211122344443 3443 3345
Q ss_pred HHHHHHHHhcCCcceeeec-cchhhHHHHHHHHH----HhcCccchhhHHHHHHHHHHHHH
Q 018256 257 SVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIA----FLGDTLYLGSFVGAATIALGFYA 312 (359)
Q Consensus 257 ~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~----~~ge~~~~~~~iG~~lii~gi~l 312 (359)
..+.....++.++...... ..-+.+.+++++.+ .-++++++.+++|.+++++|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 5666788899998887666 44566777888885 23468899999999999999864
No 74
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.61 E-value=0.00061 Score=61.14 Aligned_cols=131 Identities=16% Similarity=0.114 Sum_probs=93.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCG 82 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 82 (359)
.|++..++++++.+....++.|. . +++|....+=.. ++.++-..+.....++ +...|..+.-++.|++...+
T Consensus 137 ~kgi~~Ll~stigy~~Y~~~~~~--~-~~~~~~~~lPqa-iGm~i~a~i~~~~~~~----~~~~k~~~~nil~G~~w~ig 208 (269)
T PF06800_consen 137 KKGILALLISTIGYWIYSVIPKA--F-HVSGWSAFLPQA-IGMLIGAFIFNLFSKK----PFFEKKSWKNILTGLIWGIG 208 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh--c-CCChhHhHHHHH-HHHHHHHHHHhhcccc----cccccchHHhhHHHHHHHHH
Confidence 57889999999999999998887 2 478877666443 4444333222222221 22334456668899999999
Q ss_pred HHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHH
Q 018256 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGAL 143 (359)
Q Consensus 83 ~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ 143 (359)
+.+++.+.+..+.+.+-.+..+..++..+-+.+++||+=+.|.. ...++|+++.++|.+
T Consensus 209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~--~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEM--IYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhH--HHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999875411 123345555555543
No 75
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.47 E-value=0.0015 Score=50.47 Aligned_cols=63 Identities=16% Similarity=0.244 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHH
Q 018256 252 AVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVI 314 (359)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~ 314 (359)
+..+++.+...++|+.|...+ ++...+..+.+.+.+++++||++++.+++|.++|+.|+....
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 567889999999999987764 445667888889999999999999999999999999998764
No 76
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.35 E-value=0.0019 Score=49.63 Aligned_cols=66 Identities=21% Similarity=0.349 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256 250 IFAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW 315 (359)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~ 315 (359)
+.+..+++.+...++|+.|...+ ++...+..+.+.+.+++++||++++.+++|..+|++|++....
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 33567889999999999887764 4556688889999999999999999999999999999988754
No 77
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.31 E-value=0.0018 Score=60.50 Aligned_cols=139 Identities=10% Similarity=0.052 Sum_probs=91.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHH--HHHHHHHHH-HHHHHhcCCC-CcccccCchhHHHHHHH
Q 018256 173 NWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLIC--SIFVTILSS-AVSLVAEKNP-NAWRLRPDIELMAIGYS 248 (359)
Q Consensus 173 ~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (359)
+...|.++++++++|++.+.+-.|| .++.+ .+.. |- .++..++.. ..+.+..++. ......+...+..-+..
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~ 79 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF 79 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence 4578999999999999999999998 44443 2222 32 112221111 1111122222 12221222234444444
Q ss_pred HHHHHHHHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCcc---c----hhhHHHHHHHHHHHHHHHhc
Q 018256 249 AIFAVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTL---Y----LGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 249 g~~~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~---~----~~~~iG~~lii~gi~l~~~~ 316 (359)
|+ .=.++...+..++++.+.+....+ .-++.+.+.+++.+++||.. + ....+|.+++++|+.+..+.
T Consensus 80 G~-~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 80 GA-LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HH-HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 54 466889999999999999887666 67888999999999999764 2 33578999999999999984
No 78
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.30 E-value=0.0038 Score=50.65 Aligned_cols=130 Identities=15% Similarity=0.137 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018256 6 TAAMVTLEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM 84 (359)
Q Consensus 6 ~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (359)
++..+++..+-+.+..++-. +.+..+ |....+.-+..+.+++..+....+++.. .+.+ +.-++...-|+++.....
T Consensus 3 ~lla~~aG~~i~~q~~~N~~-L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~-~~~~-~~p~w~~lGG~lG~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQ-LGKALGSPLVASFISFGVGFILLLIILLITGRPSL-ASLS-SVPWWAYLGGLLGVFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHhCccHHHHHHHHHHHHHHHHHHHHHhccccc-chhc-cCChHHhccHHHHHHHHH
Confidence 34556666777777777766 333555 9999999999999988777666655422 2222 222455568899999999
Q ss_pred HHHHHhccCCcchhhhhhccch-HHHHHHHHH----HhhccccceeccccccchhHHHHHhHHHH
Q 018256 85 FHYFGIENGSPALASAMIDLTP-GFTFILAII----FRMEKLELRVQSSQAKSFGTVLLIGGALI 144 (359)
Q Consensus 85 ~~~~al~~~~~~~a~~l~~~~P-i~~~lls~l----~~~E~~~~~~~~~~~~~~g~~l~~~Gv~l 144 (359)
+..+.++..+++.+..+.-+.- +...+++.+ .-|++++ ..|.+|+++.++|+++
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~------~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFS------LRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCC------HHHHHHHHHHHHHHhC
Confidence 9999999999999888775444 444445543 3556676 5599999999999863
No 79
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.29 E-value=0.00089 Score=51.01 Aligned_cols=66 Identities=20% Similarity=0.332 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcC
Q 018256 252 AVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQ 317 (359)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~ 317 (359)
+..++|.+...++|+.+...+ ++......+.+.+.+++++||++++.+++|..++++|+.......
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 456889999999999887664 556778888899999999999999999999999999999877643
No 80
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.26 E-value=0.0006 Score=52.81 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHH
Q 018256 10 VTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLL-SCCGQMFHYF 88 (359)
Q Consensus 10 l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~ 88 (359)
++.+++||...+++|.+.. +.++..-.. |..-....+ + .++ ++. ..+. +-.+...|++
T Consensus 2 l~Vg~~WG~Tnpfik~g~~-~~~~~~~~~-~~~~~~~~L-----l---------~n~----~y~-ipf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSS-GLEKVKASL-QLLQEIKFL-----L---------LNP----KYI-IPFLLNQSGSVLFFL 60 (113)
T ss_pred eeehHHhcCchHHHHHHHh-hcCCccchH-HHHHHHHHH-----H---------HhH----HHH-HHHHHHHHHHHHHHH
Confidence 4578999999999999765 444433331 321111110 0 112 222 2333 4888999999
Q ss_pred HhccCCcchhhhhh-ccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 89 GIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 89 al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
.+...+.|.+..+. .+.=+||++.++++.+|..++ ..++|+.+.+.|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~------~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISR------RTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccch------hHHHHHHHHHcCeeee
Confidence 99999999999996 677788888888877777774 4899999999998754
No 81
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.16 E-value=0.0074 Score=46.65 Aligned_cols=66 Identities=17% Similarity=0.120 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 74 LLGLLSCCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 74 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
..-+....++.+...++++.|.+.+=.+- ..--+.+.+.+++++||++++. +++|+.+.+.|++.+
T Consensus 40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 33333378889999999999999976554 5777889999999999999954 999999999999886
No 82
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.14 E-value=0.0021 Score=48.36 Aligned_cols=56 Identities=25% Similarity=0.446 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhcCccchhhHHHHHHH
Q 018256 251 FAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATI 306 (359)
Q Consensus 251 ~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~li 306 (359)
.+.++++.++.+++|+.+.+.+ .+...+..+.+.+.|.+++||++|+.+++|..+|
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3677889999999999998887 4456689999999999999999999999999876
No 83
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.14 E-value=0.003 Score=58.44 Aligned_cols=138 Identities=11% Similarity=0.135 Sum_probs=110.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC---CHHHHHHHHHHH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSR---GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL---TWSIVCRIFLLG 76 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~---~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~g 76 (359)
..|-++.+++++++|...++.|.-.++ .+|...+-.+-.++..++++|..++.+.... +++ +..+...++..+
T Consensus 246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~-e~F~lP~~~q~~~vv~~~ 324 (416)
T KOG2765|consen 246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE-ERFELPSSTQFSLVVFNN 324 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc-CcccCCCCceeEeeeHhh
Confidence 567889999999999999999985542 3677777777788999999987665544322 222 334455677888
Q ss_pred HHH-HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256 77 LLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (359)
Q Consensus 77 ~~~-~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~ 147 (359)
+++ .+..++|.+|.-.+++-.+++-+.++--..++...++.+.+++ ....+|.+..++|-+++..
T Consensus 325 ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S------~~~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 325 LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPS------ALYIIGSIPIFVGFVIVNI 390 (416)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCC------HHHHHHHHHHHHHHhheec
Confidence 999 9999999999999999999998887777788888999999998 6699999999999887743
No 84
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.11 E-value=0.009 Score=48.64 Aligned_cols=140 Identities=12% Similarity=0.090 Sum_probs=93.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHH
Q 018256 175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVS 254 (359)
Q Consensus 175 ~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 254 (359)
.+..++.+.++++-.+-.-.+.++.+...+|..-....+..+++.+..+.+..+... .+.......|+..+. |+++.
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~-~~a~~~~~pwW~~~G-G~lGa- 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHP-GLAAVASAPWWAWIG-GLLGA- 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCC-chhhccCCchHHHHc-cchhh-
Confidence 456788889999999999999999888877999999999999999988887744432 222222223554432 23222
Q ss_pred HHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhc----CccchhhHHHHHHHHHHHHHHHhcC
Q 018256 255 VRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLG----DTLYLGSFVGAATIALGFYAVIWGQ 317 (359)
Q Consensus 255 ~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~g----e~~~~~~~iG~~lii~gi~l~~~~~ 317 (359)
+--..-....+|.+++.. .....-+-+.+.+.|.+=+. .+++...++|.+++++|+++..+.+
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 222233455666666543 33455566667777665333 4789999999999999965555443
No 85
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.02 E-value=0.0024 Score=58.91 Aligned_cols=137 Identities=10% Similarity=0.086 Sum_probs=108.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHHHHH-HHHHHhhccCC---C-CCCCHHHHHHHHH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMS---RGASHFILVVYSNTLAIFLLV-PSSFIFYRKRT---P-PQLTWSIVCRIFL 74 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~---~~~~p~~~~~~R~~~a~i~l~-~~~~~~~~~~~---~-~~~~~~~~~~~~~ 74 (359)
+.+....+.+.+..+...++.|..+. +.++++.+..+-.-++.+.++ |+......... . ...+... .....
T Consensus 162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 240 (316)
T KOG1441|consen 162 LFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LILLL 240 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHHHH
Confidence 56788889999999999999999873 459999999999888888888 87655433221 1 1233333 33344
Q ss_pred HHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHH
Q 018256 75 LGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (359)
Q Consensus 75 ~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~ 146 (359)
.+++....|...|..+.++++-.-++....--+++...++++++|++| ..+.+|..+++.|+++-.
T Consensus 241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt------~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVT------FLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCc------hhhHHHHHHHHHHHHHHH
Confidence 446668889999999999999999999888888888899999999999 559999999999998863
No 86
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.97 E-value=0.0022 Score=50.50 Aligned_cols=66 Identities=20% Similarity=0.284 Sum_probs=57.3
Q ss_pred HHHH-HHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256 76 GLLS-CCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (359)
Q Consensus 76 g~~~-~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~ 147 (359)
.+.. ++++.++..++++.|.+.+-.+- ...-+.+.+++++++||+++++ +++|+.+.++|++.+-.
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence 3444 88999999999999999987775 6888899999999999999955 99999999999988843
No 87
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.90 E-value=0.012 Score=45.65 Aligned_cols=66 Identities=15% Similarity=0.217 Sum_probs=56.7
Q ss_pred HHHHH-HHHHHHHHHHhccCCcchhhhh-hccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHH
Q 018256 75 LGLLS-CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (359)
Q Consensus 75 ~g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~ 146 (359)
..+.+ .+.+.++..++++.|.+.+-.+ ....-+.+.+.+++++||++| +.+++|+.+.++|++.+-
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~------~~~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLD------LPAIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHHHHHHHHh
Confidence 34445 8888899999999999998776 457788889999999999999 459999999999999983
No 88
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=96.77 E-value=0.45 Score=44.08 Aligned_cols=300 Identities=16% Similarity=0.108 Sum_probs=164.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhc-cCC---CCCCCHHHHHHHHHHHHH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYR-KRT---PPQLTWSIVCRIFLLGLL 78 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~-~~~---~~~~~~~~~~~~~~~g~~ 78 (359)
..+++...+.+++-|..++-.|. .. +.+ ++..+.-..+-..++.|+...... +.. ....+...+....+.|++
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kk-vk-~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l 82 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKK-VK-GWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL 82 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhh-cC-Ccc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence 35677888888999999988887 33 333 333332233333344454422211 000 022344566777888988
Q ss_pred HHHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccc-cceeccccccchhHHHHHhHHHHHHhhcCCCCCCC
Q 018256 79 SCCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKL-ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSA 156 (359)
Q Consensus 79 ~~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~-~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~ 156 (359)
-..+...|=.+++|...+....+. .+.-.+-.++-.++.++-- -..+..+..-++|++++++|+.+..........
T Consensus 83 WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~-- 160 (344)
T PF06379_consen 83 WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK-- 160 (344)
T ss_pred HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh--
Confidence 899999999999999999865544 4555555555555544210 011223456899999999999998432211100
Q ss_pred CCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHHHHHH-------HHhhCCCchH----HHHHHHHHHHHHHHHHHH
Q 018256 157 PSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAW-------IVRDYPAELM----VTLICSIFVTILSSAVSL 225 (359)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~vl~k~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 225 (359)
+......+.+...|.+.++.+++.-|..++-... ..+...++.. .....+.-+.+.-...++
T Consensus 161 -------~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~ 233 (344)
T PF06379_consen 161 -------ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCL 233 (344)
T ss_pred -------hhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHH
Confidence 0001123456788999999999888888764421 1111111221 112223333344444443
Q ss_pred Hh--c-CCCC---cccc-cCc-hh-HHHHHHHHHHHHHHHHHHHHHHHhcCCcc----eeeeccchhhHHHHHHHHHHhc
Q 018256 226 VA--E-KNPN---AWRL-RPD-IE-LMAIGYSAIFAVSVRSVFHTWALRKKGPV----YVSMFKPLGMVVALVFGIAFLG 292 (359)
Q Consensus 226 ~~--~-~~~~---~~~~-~~~-~~-~~~~~~~g~~~~~~~~~~~~~~l~~~~~~----~~s~~~~l~pi~~~i~~~~~~g 292 (359)
.. . .+.+ +... .+. .. ....+..|+ -=...+++|-++-.+.+.. --.+.+.+..+++-++|.+ ++
T Consensus 234 ~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lk 311 (344)
T PF06379_consen 234 ILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LK 311 (344)
T ss_pred HHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HH
Confidence 22 1 1221 1111 110 11 112222232 2345566666776666644 2334566677777777876 66
Q ss_pred Cc------cchhhHHHHHHHHHHHHHHHhc
Q 018256 293 DT------LYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 293 e~------~~~~~~iG~~lii~gi~l~~~~ 316 (359)
|. .-..-++|.++++.+++++-++
T Consensus 312 EWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 312 EWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 62 2244578999988888877654
No 89
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.75 E-value=0.0037 Score=55.97 Aligned_cols=77 Identities=12% Similarity=0.209 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCccc
Q 018256 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKE 320 (359)
Q Consensus 243 ~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~ 320 (359)
+....-++ ...+.-.+.+.++++.+|+...++..+..+++.++++++++.+++..||++..+..+|+.+........
T Consensus 18 ~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 18 LKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 33444444 355666778899999999999999999999999999999999999999999999999999988766554
No 90
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.59 E-value=0.016 Score=44.20 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=55.0
Q ss_pred HHHH-HHHHHHHHHHhccCCcchhhhh-hccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 76 GLLS-CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 76 g~~~-~~~~~~~~~al~~~~~~~a~~l-~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
.+++ ..++.+...+++++|.+.+=.+ ...--+.+.+.+++++||+++ ..+++|+.+.++|++.+
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~------~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLS------LIKLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCC------HHHHHHHHHHHHHHHHh
Confidence 3344 8889999999999999987554 467778899999999999999 45999999999999887
No 91
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.55 E-value=0.009 Score=45.89 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 79 SCCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 79 ~~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
...++.+...+++.+|.+.+=.+- ..--+.+.+.+++++||++++ .+++|+.+.++|++.+
T Consensus 39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~------~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASP------ARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHhh
Confidence 388899999999999999876554 577888999999999999995 4999999999999887
No 92
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.44 E-value=0.0012 Score=57.65 Aligned_cols=134 Identities=12% Similarity=0.014 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHH
Q 018256 176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSV 255 (359)
Q Consensus 176 ~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 255 (359)
.+.+.+++=++.|+..-....|... .|...+.-..+-+.+..+++.++..+... +. .+..-+..|. .=.+
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~~~p~~T-~~-----~~iv~~isG~-~Ws~ 71 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLFVSPELT-LT-----IFIVGFISGA-FWSF 71 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHheeecCccc-hh-----hHHHHHHhhh-Hhhh
Confidence 3567888888999987666554422 25555655666666666666554322211 11 1222223333 3457
Q ss_pred HHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhH----HHHHHHHHHHHHHHhcCcc
Q 018256 256 RSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSF----VGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 256 ~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~----iG~~lii~gi~l~~~~~~~ 319 (359)
++..+.++.+..+.+++..+ +.++.+-+-+++++.+||..+..++ +..++++.|+++..+.++.
T Consensus 72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~ 140 (288)
T COG4975 72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN 140 (288)
T ss_pred hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence 88889999999999999988 5678888899999999999887764 4457788888888776553
No 93
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.37 E-value=0.031 Score=50.02 Aligned_cols=179 Identities=12% Similarity=0.034 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018256 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM 84 (359)
Q Consensus 5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (359)
++++.+.+++++|.+++-.|. .+ .-|++.+-++......+.-+.+..+... |++. .+..+.|.+.+.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~-~~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~----p~f~----p~amlgG~lW~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKK-FD-TGDGFFFQWVMCSGIFLVGLVVNLILGF----PPFY----PWAMLGGALWATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEe-cc-CCCcHHHHHHHHHHHHHHHHHHHHhcCC----Ccce----eHHHhhhhhhhcCce
Confidence 467889999999999999998 55 4688777777665544444433333221 3332 456677788899999
Q ss_pred HHHHHhccCCcchhhhhhccchHHHH-HHHHH-Hhh---ccccceeccccccchhHHHHHhHHHHHHhhcCCCCCC-C--
Q 018256 85 FHYFGIENGSPALASAMIDLTPGFTF-ILAII-FRM---EKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITS-A-- 156 (359)
Q Consensus 85 ~~~~al~~~~~~~a~~l~~~~Pi~~~-lls~l-~~~---E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~-~-- 156 (359)
+..-.++..+.+...++-++.-..+- ..+.+ +++ |.++. .....+|++++++|..+..+-+.+.-.. .
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~----~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~ 146 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSS----PWLNYIGVALVLVSGIIFSFIKSEEKEPKKSS 146 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccch----hHHHHHHHHHHHHHHHheeeecCCCCCccccc
Confidence 99999999999999888876544443 33333 333 33332 2678899999999988875543222000 0
Q ss_pred -----C-Ccccchhh------hccC-----CCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 018256 157 -----P-SKNKLINE------LVQL-----PLSNWTIGGIFLAAHSVILAIYYIVQAW 197 (359)
Q Consensus 157 -----~-~~~~~~~~------~~~~-----~~~~~~~G~~~~l~a~~~~a~~~vl~k~ 197 (359)
. ++.+...+ ..+. ...+...|..+++.+++.|+...+=...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Y 204 (254)
T PF07857_consen 147 EETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIY 204 (254)
T ss_pred cccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHH
Confidence 0 00000000 0010 1124678888888888888886543333
No 94
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.13 E-value=0.015 Score=45.10 Aligned_cols=109 Identities=14% Similarity=0.068 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 018256 183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTW 262 (359)
Q Consensus 183 ~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 262 (359)
+-++.|+..+.+.||..+..+ +..-.. +.. .-... ++ . .|-+.+ .+...-.+-.+|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~-~~~~~----Ll---------~----n~~y~i--pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLE-KVKASL-QLL-QEIKF----LL---------L----NPKYII--PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcC-CccchH-HHH-HHHHH----HH---------H----hHHHHH--HHHHHHHHHHHHHH
Confidence 346789999999998877655 222221 111 11111 10 0 022222 22234456677788
Q ss_pred HHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHH
Q 018256 263 ALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAV 313 (359)
Q Consensus 263 ~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~ 313 (359)
.+++.+.+.+.++ +.+.-+++++.++++.+|..+...++|+++|++|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 8999999999998 59999999999998888888899999999999998653
No 95
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.70 E-value=0.081 Score=39.74 Aligned_cols=52 Identities=21% Similarity=0.152 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhccCCcchhhhhh-ccchHHHHHHHHHHhhccccceeccccccchhHHH
Q 018256 80 CCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVL 137 (359)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~l~-~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l 137 (359)
+.+..++..++++.|.+.+-.+. .+..+.+.+.+.+++||++|++ |++|+.+
T Consensus 40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l 92 (93)
T PF00893_consen 40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence 88889999999999999986654 6888999999999999999955 8888765
No 96
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.55 E-value=0.043 Score=48.26 Aligned_cols=66 Identities=14% Similarity=0.193 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHH
Q 018256 72 IFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGAL 143 (359)
Q Consensus 72 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ 143 (359)
.+...+..+.+..+..+.+++.++..-+....+.++++.+++.++++|+++ ..+++|+.+.+.|+.
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls------~~~~~g~~lV~~~~~ 220 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKIS------STFYLGAILVFLATF 220 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcc------HHHHHHHHHHHeeeE
Confidence 334445557888889999999999999999999999999999999999999 459999999888864
No 97
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.47 E-value=0.21 Score=40.79 Aligned_cols=133 Identities=13% Similarity=0.017 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018256 5 VTAAMVTLEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ 83 (359)
Q Consensus 5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~-p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (359)
.++..+.+..+-.....++-. +.+..+ |....+.-+..+.+++..+.+...+... .....+.-++.+.-|++++...
T Consensus 6 ~ll~~i~aG~~l~~Q~~iN~q-L~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~-~a~~~~~pwW~~~GG~lGa~~v 83 (150)
T COG3238 6 YLLFAILAGALLPLQAAINGR-LARYLGSPLLASLISFLVGTVLLLILLLIKQGHPG-LAAVASAPWWAWIGGLLGAIFV 83 (150)
T ss_pred HHHHHHHHhhhhhhHHHHHHH-HHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhccCCchHHHHccchhhhhh
Confidence 345555666666666666666 333444 9999999999988888777666333222 2222344466677788888888
Q ss_pred HHHHHHhccCCcchhhhhhc-cchHHHHHHHHHH-h---hccccceeccccccchhHHHHHhHHHHH
Q 018256 84 MFHYFGIENGSPALASAMID-LTPGFTFILAIIF-R---MEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 84 ~~~~~al~~~~~~~a~~l~~-~~Pi~~~lls~l~-~---~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
...........++....+.- -+-+...++..+= + +.+++ ..+++|+++.++|++++
T Consensus 84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~------~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLN------LPRILGILLVLAGILLA 144 (150)
T ss_pred hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCC------HHHHHHHHHHHHHHHHh
Confidence 88888888888877666553 4444445554221 2 24444 66999999999995554
No 98
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.46 E-value=0.8 Score=42.56 Aligned_cols=142 Identities=10% Similarity=0.074 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCC---CchHHHHHHHHHHHHHHHHHHHHhcCC--------CCcccccCchhHHHH
Q 018256 177 GGIFLAAHSVILAIYYIVQAWIVRDYP---AELMVTLICSIFVTILSSAVSLVAEKN--------PNAWRLRPDIELMAI 245 (359)
Q Consensus 177 G~~~~l~a~~~~a~~~vl~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 245 (359)
=.+.++...+-++......|...+..+ .+.+..+..-++-.+++....+..+.. ...+......+...+
T Consensus 16 k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~ 95 (345)
T KOG2234|consen 16 KYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV 95 (345)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence 334445555566666666665544321 256667777777777777776644311 111111111122222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcc
Q 018256 246 GYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 246 ~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~ 319 (359)
..-++ ...+--.+++.++.+.+|++..+...+....+.++..++++++++..||...++..+|+.++......
T Consensus 96 ~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~ 168 (345)
T KOG2234|consen 96 SVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS 168 (345)
T ss_pred HHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence 22222 23344457789999999999999999999999999999999999999999999999999999944433
No 99
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.30 E-value=0.27 Score=44.56 Aligned_cols=138 Identities=15% Similarity=0.208 Sum_probs=106.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC-----CCCHHHHHHHHHHH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSR-GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP-----QLTWSIVCRIFLLG 76 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~-~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g 76 (359)
..+++++..--++-|+.....+..+.. .++++.+.++-++..++.-... ++.....+ + +..++.++..++.+
T Consensus 171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~-~av~F~~~hp~~~~Di~l~s 248 (327)
T KOG1581|consen 171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLL-PAVSFIKEHPDVAFDILLYS 248 (327)
T ss_pred hHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCc-hHHHHHHcChhHHHHHHHHH
Confidence 456777777778888888877765542 5889999999998888776543 22222111 1 22456678888999
Q ss_pred HHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhh
Q 018256 77 LLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLY 148 (359)
Q Consensus 77 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~ 148 (359)
.+++.++.+-|.-++.-++-.-+.+..+--++.++++.+.++.+++ +.+|.|+.+.+.|..+=...
T Consensus 249 ~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s------~~q~~g~~iVFg~i~l~~~~ 314 (327)
T KOG1581|consen 249 TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLS------SEQWLGVLIVFGGIFLEILL 314 (327)
T ss_pred HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccc------hhhccCeeeehHHHHHHHHH
Confidence 9998889888888888887777888889999999999999999999 55999999999998776443
No 100
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=94.87 E-value=0.14 Score=45.77 Aligned_cols=127 Identities=9% Similarity=0.129 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCC-CcccccCchh-----HHHHHHHHH
Q 018256 177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP-NAWRLRPDIE-----LMAIGYSAI 250 (359)
Q Consensus 177 G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~g~ 250 (359)
|.+.++.|+++|+...+=.||.... | ++....++.....+...++.+..+.+. ..|......- ...+-.+-.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g-D-g~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~~ 78 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG-D-GFFFQWVMCSGIFLVGLVVNLILGFPPFYPWAMLGGALWATGNILVVPIIKT 78 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC-C-cHHHHHHHHHHHHHHHHHHHHhcCCCcceeHHHhhhhhhhcCceeehhHhhh
Confidence 4567888999999988888877543 3 676666666666666666665444321 1221110000 001111111
Q ss_pred HHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHH-HhcCc-----cchhhHHHHHHHHHHHHHHHhcCccc
Q 018256 251 FAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIA-FLGDT-----LYLGSFVGAATIALGFYAVIWGQAKE 320 (359)
Q Consensus 251 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~-~~ge~-----~~~~~~iG~~lii~gi~l~~~~~~~~ 320 (359)
++-++++.+|. ....+.+-..+.+ ++|+. -++..++|.+++++|..+...-|.++
T Consensus 79 iGLglg~liW~---------------s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 79 IGLGLGMLIWG---------------SVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhHHHHHHHH---------------HHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 23344444443 1233333333332 34432 23567899999999998888765554
No 101
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.70 E-value=0.26 Score=43.04 Aligned_cols=136 Identities=18% Similarity=0.165 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCC---CCCCHHHHHHHHHHHHHHH
Q 018256 5 VTAAMVTLEFLDVGLNTVTKAAM-SRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP---PQLTWSIVCRIFLLGLLSC 80 (359)
Q Consensus 5 ~~~~~l~~~~~~g~~~~~~k~~~-~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~ 80 (359)
+-+++++.-.+-|......-..- +..-+...+.++-++-+.+.+..-.++...-+.. ..-.+..++.+...++.++
T Consensus 173 GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~ 252 (337)
T KOG1580|consen 173 GELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASC 252 (337)
T ss_pred HHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34556666666666665544321 1123444555555555555543322221110000 0011345677788899999
Q ss_pred HHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHH
Q 018256 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (359)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~ 146 (359)
+++.+.|.-+.+-++-.-+++..+--+|+++.+.++++.+++.| ||+|..+.+.|...=.
T Consensus 253 LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 253 LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADV 312 (337)
T ss_pred hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHh
Confidence 99999999999999999999999999999999999999999955 9999999999876643
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.49 E-value=0.38 Score=44.01 Aligned_cols=138 Identities=13% Similarity=0.103 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCCCCCHHHHHHHHHHHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMS-RGASHFILVVYSNTLAIFLLVPSSFIFYRK-----RTPPQLTWSIVCRIFLLGL 77 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~-~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~ 77 (359)
.++..++...+.-+...+..|+..+ .+.+.+.++++..+.+...+....++.... ......+...+....+.++
T Consensus 157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv 236 (314)
T KOG1444|consen 157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV 236 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence 3566677777777777788887654 367888899999999888876655444321 1101123445566777888
Q ss_pred HHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256 78 LSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (359)
Q Consensus 78 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~ 147 (359)
++..-+++.+++.+..++...++.....-+.+.+...++.+++++ +...+|+.+++.|.++-..
T Consensus 237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~------~~n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFT------FLNVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceec------hhhhHHHHHHhhhhhHHhh
Confidence 889999999999999999999888855556666666777888898 6699999999999888643
No 103
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=93.93 E-value=0.018 Score=48.62 Aligned_cols=66 Identities=15% Similarity=0.169 Sum_probs=59.5
Q ss_pred HHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccc
Q 018256 256 RSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEE 321 (359)
Q Consensus 256 ~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~ 321 (359)
+-+.|..++++++|+.++.+..-.-.+..+++++++||++...+++..++-+.|+++..+.++..+
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 356788999999999999999999999999999999999999999999999999998887765543
No 104
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.23 E-value=0.022 Score=51.89 Aligned_cols=130 Identities=15% Similarity=0.207 Sum_probs=91.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHH
Q 018256 171 LSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAI 250 (359)
Q Consensus 171 ~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 250 (359)
..++..|.++++.+.+..+...++.||..++.. . . ..-.+++......+ ..|+ .|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~---~--------------~~ra~~gg~~yl~~--~~Ww----~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A---S--------------GLRAGEGGYGYLKE--PLWW----AGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h---h--------------cccccCCCcchhhh--HHHH----HHH
Confidence 345568999999999999999999988766643 1 0 00011111111111 1122 233
Q ss_pred HHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCccccccc
Q 018256 251 FAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKMD 324 (359)
Q Consensus 251 ~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~~ 324 (359)
+...++-...+.+....+++.++.+..++.+...+++..+++|+++....+|+++.++|-.+.+...+++.+..
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~ 145 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIE 145 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccc
Confidence 34445555566666677999999999999999999999999999999999999999999888887665554443
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=92.57 E-value=0.61 Score=40.47 Aligned_cols=113 Identities=18% Similarity=0.160 Sum_probs=91.2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhhccCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccch
Q 018256 30 GASHFILVVYSNTLAIFLLVPSSFIFYRKRTP---PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTP 106 (359)
Q Consensus 30 ~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~P 106 (359)
....+..++|.++++..++..+-++...+... ..++.....+.++.|++...-.++.-|.++-++.+.-+.+..+.-
T Consensus 182 Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNK 261 (309)
T COG5070 182 NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNK 261 (309)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhh
Confidence 46678889999999999988776665543321 235556667888899999888889999999999999999998888
Q ss_pred HHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhh
Q 018256 107 GFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLY 148 (359)
Q Consensus 107 i~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~ 148 (359)
.-..+.+.++++|+.| ..++..+++++...++-...
T Consensus 262 lp~alaGlvffdap~n------f~si~sillGflsg~iYava 297 (309)
T COG5070 262 LPIALAGLVFFDAPVN------FLSIFSILLGFLSGAIYAVA 297 (309)
T ss_pred ChHHHhhhhhcCCchh------HHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999 55999999998877776443
No 106
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=90.86 E-value=4.8 Score=36.82 Aligned_cols=136 Identities=16% Similarity=0.103 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHHHHHHHHhhccCCC------CCCC----HHHH
Q 018256 4 SVTAAMVTLEFLDVGLNTVTKAAMSRG----ASHFILVVYSNTLAIFLLVPSSFIFYRKRTP------PQLT----WSIV 69 (359)
Q Consensus 4 ~~~~~~l~~~~~~g~~~~~~k~~~~~~----~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~------~~~~----~~~~ 69 (359)
.+..+.+.++++-|+-+++.+..+.++ -+|......-.-...+.++|..+...+.... ...+ ++..
T Consensus 164 ~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~ 243 (349)
T KOG1443|consen 164 EGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVI 243 (349)
T ss_pred hhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHH
Confidence 467788889999999999999876522 2466666555555555666655554432210 0111 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 70 CRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 70 ~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
..+...|.+.++.-.+-|.=++.++.-..++..-..=+-+.+++..+++++++ -..+.|..++..|+..=
T Consensus 244 g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls------~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 244 GLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLS------LLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchh------hhHHHHHHHHHHHHHHh
Confidence 22333333333334444444566666555665556667789999999999999 66999999999998764
No 107
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=88.69 E-value=2.8 Score=38.98 Aligned_cols=142 Identities=16% Similarity=0.097 Sum_probs=82.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHH-HHhcCCCC-cccccCchhHHHHHHHHH
Q 018256 173 NWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVS-LVAEKNPN-AWRLRPDIELMAIGYSAI 250 (359)
Q Consensus 173 ~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~ 250 (359)
.-..|.++..+++++-+.+++=.||. |+.+ -...=..+.+++-++.-.+. ++.-++.. .....+...+......|+
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 45789999999999999988877766 3433 33344444455554443333 22233322 222222233444444454
Q ss_pred HHHHHHHHHHHHHHhcCCccee-eeccchhhHHHHHHHHHHhcC-------ccchhhHHHHHHHHHHHHHHHhcC
Q 018256 251 FAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGD-------TLYLGSFVGAATIALGFYAVIWGQ 317 (359)
Q Consensus 251 ~~~~~~~~~~~~~l~~~~~~~~-s~~~~l~pi~~~i~~~~~~ge-------~~~~~~~iG~~lii~gi~l~~~~~ 317 (359)
-=+++-..|-.++|+.+.+.. ++..-+.-+++.++--++.|+ +-....++|.++.++|+.+..+.-
T Consensus 82 -lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG 155 (344)
T PF06379_consen 82 -LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG 155 (344)
T ss_pred -HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence 244556666777888776543 333444444444444444332 223467899999999999998753
No 108
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=88.68 E-value=0.9 Score=34.38 Aligned_cols=60 Identities=18% Similarity=0.203 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHH
Q 018256 255 VRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVI 314 (359)
Q Consensus 255 ~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~ 314 (359)
.+-.+|++.+++.+-+.+..+ +.+.-.++.++|..+..|......++|+.+++.|+++..
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 344566777999998888777 566888999999986666667888999999999998754
No 109
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=88.56 E-value=15 Score=31.65 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=23.5
Q ss_pred HHHHHHHhcCccchhhHHHHHHHHH--HHHHHHhcC
Q 018256 284 LVFGIAFLGDTLYLGSFVGAATIAL--GFYAVIWGQ 317 (359)
Q Consensus 284 ~i~~~~~~ge~~~~~~~iG~~lii~--gi~l~~~~~ 317 (359)
-.+|..++++-.-+.+..|.++.++ |.+...+++
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~~ 168 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARRE 168 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 4558888888888888888877764 554444433
No 110
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=88.47 E-value=0.67 Score=42.14 Aligned_cols=64 Identities=13% Similarity=0.081 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHhcCCcceeeec-cchhhHHHHHHHHHHhcCccc--hhhHHHHHHHHHHHHHHHhc
Q 018256 252 AVSVRSVFHTWALRKKGPVYVSMF-KPLGMVVALVFGIAFLGDTLY--LGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 252 ~~~~~~~~~~~~l~~~~~~~~s~~-~~l~pi~~~i~~~~~~ge~~~--~~~~iG~~lii~gi~l~~~~ 316 (359)
.--++-.+..+++...+.+.+-++ ..+..+.++.+.|+ ++++.+ ..-+.|.+++++++++-...
T Consensus 81 vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga~a 147 (336)
T PF07168_consen 81 VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGAAA 147 (336)
T ss_pred hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHHHH
Confidence 344566666777777676665555 34445556667775 455554 24567888888888876643
No 111
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=88.15 E-value=9.7 Score=28.95 Aligned_cols=112 Identities=21% Similarity=0.325 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q 018256 6 TAAMVTLEFLDVGLNTVTKAAMSRGASH------FILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS 79 (359)
Q Consensus 6 ~~~~l~~~~~~g~~~~~~k~~~~~~~~p------~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 79 (359)
...++...++||...++.|.+-. +.+. ....++|-.... ..+|+.+ +-=.++
T Consensus 5 ~~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl-----------------~l~w~Y~----iPFllN 62 (125)
T KOG4831|consen 5 MDKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTL-----------------FLNWEYL----IPFLLN 62 (125)
T ss_pred HHHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHH-----------------HHhHHHH----HHHHHH
Confidence 45677889999999999998533 3322 222222221111 1223222 222345
Q ss_pred HHHHHHHHHHhccCCcchhhhhhc-cchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 80 CCGQMFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~l~~-~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
-++..+||+-+++.+.+.+..+.+ +.-.|+++.+..+ +|+..- +..+.|..+.+.|+.++
T Consensus 63 qcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g-----~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 63 QCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQG-----GLALLGTSLIVFGIWLC 123 (125)
T ss_pred HhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-cccccc-----ceeehhhhHHhhhhhhe
Confidence 677889999999999999988875 5557777777765 555542 56888999999988765
No 112
>PRK02237 hypothetical protein; Provisional
Probab=85.19 E-value=3.3 Score=31.65 Aligned_cols=46 Identities=13% Similarity=0.181 Sum_probs=40.1
Q ss_pred eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256 273 SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA 318 (359)
Q Consensus 273 s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~ 318 (359)
+.+.-.-.+.++++++.+-|++|+...++|..+.++|+.+..+..+
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 4566777888899999999999999999999999999988876654
No 113
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=80.31 E-value=1.9 Score=32.83 Aligned_cols=46 Identities=17% Similarity=0.278 Sum_probs=39.5
Q ss_pred eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256 273 SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA 318 (359)
Q Consensus 273 s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~ 318 (359)
+.+.-.-.+.++++++.+-|++|+...++|..+.++|+.+..+.+|
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 3456667788899999999999999999999999999998877654
No 114
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=80.21 E-value=2.9 Score=37.65 Aligned_cols=141 Identities=18% Similarity=0.136 Sum_probs=95.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHHHhhccCCC---CCC-CHHHHHHHHHHHH
Q 018256 3 ASVTAAMVTLEFLDVGLNTVTKAAMSR-GASHFILVVYSNTLAIFLLVPSSFIFYRKRTP---PQL-TWSIVCRIFLLGL 77 (359)
Q Consensus 3 ~~~~~~~l~~~~~~g~~~~~~k~~~~~-~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~---~~~-~~~~~~~~~~~g~ 77 (359)
+.+++.-+++++.-+...+-.|..+.. +-..+.+.++.+..+.++++|...+.+..... |++ +.+-|....+.|+
T Consensus 184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl 263 (347)
T KOG1442|consen 184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL 263 (347)
T ss_pred hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH
Confidence 567888889999999999999975542 22367888999999999999988766543221 223 4455555666777
Q ss_pred HHHHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256 78 LSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYK 149 (359)
Q Consensus 78 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~ 149 (359)
+++..++-..+=++.++|-.--+-...-...=.+++..+++|.-+ ...|-+-++.++|...-..-+
T Consensus 264 fgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks------~lwwtsn~~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 264 FGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKS------GLWWTSNIVVLVGSLAYTLVK 329 (347)
T ss_pred HHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhh------hheeeeeEEEEehhHHHHHHH
Confidence 775555555555666655432222222333445677888999998 568888888888887776544
No 115
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=79.93 E-value=44 Score=33.53 Aligned_cols=45 Identities=11% Similarity=-0.014 Sum_probs=20.0
Q ss_pred eeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256 272 VSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 272 ~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
........|+=+.++|.+.-.-.......+++++++++..+..+.
T Consensus 349 ~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 349 QMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 334445566666666665332222222333333334444444433
No 116
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=79.62 E-value=11 Score=34.01 Aligned_cols=126 Identities=17% Similarity=0.178 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhccCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018256 16 DVGLNTVTKAAMS-RGASHFILVVYSNTLAIFLLVPSSFIFYRKRT----PPQLTWSIVCRIFLLGLLSCCGQMFHYFGI 90 (359)
Q Consensus 16 ~g~~~~~~k~~~~-~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~al 90 (359)
-+....+...++. +.-+..+++++...++...++..+.....--. -.+-+++.+.+.++.+..+.++......=+
T Consensus 202 DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI 281 (367)
T KOG1582|consen 202 DAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALI 281 (367)
T ss_pred HHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHH
Confidence 3333334333332 23456777777777777777655543322100 012346677777777777766666666666
Q ss_pred ccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256 91 ENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (359)
Q Consensus 91 ~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~ 147 (359)
+.-++..++.+...--..|.+++++++.++++.+ ...+.++.+.|+++=..
T Consensus 282 ~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~y 332 (367)
T KOG1582|consen 282 KLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMY 332 (367)
T ss_pred HHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcc
Confidence 7777888888888888999999999999999955 89999999999888643
No 117
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=79.05 E-value=2.2 Score=38.45 Aligned_cols=64 Identities=17% Similarity=0.148 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256 253 VSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 253 ~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
-..+-.+++.++...+++...+......+|+.+++.-+++.+++..+|+|+..+..|+..+-..
T Consensus 96 Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 96 DIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 3445556667777788888888888899999999999999999999999999999999887754
No 118
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=77.40 E-value=2.5 Score=32.13 Aligned_cols=30 Identities=20% Similarity=0.300 Sum_probs=26.3
Q ss_pred HHHHHHHhcCccchhhHHHHHHHHHHHHHH
Q 018256 284 LVFGIAFLGDTLYLGSFVGAATIALGFYAV 313 (359)
Q Consensus 284 ~i~~~~~~ge~~~~~~~iG~~lii~gi~l~ 313 (359)
..++.++++|+++++...|.++++.+++.+
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 567788999999999999999999887654
No 119
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.99 E-value=8.8 Score=28.71 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=28.9
Q ss_pred HHHHHHHHhcCccchhhHHHHHHHHHHHHHHHh
Q 018256 283 ALVFGIAFLGDTLYLGSFVGAATIALGFYAVIW 315 (359)
Q Consensus 283 ~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~ 315 (359)
-+.++.++++|++.+..+.|..+++.|+++..+
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 356789999999999999999999999987754
No 120
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=72.08 E-value=3.1 Score=32.81 Aligned_cols=21 Identities=24% Similarity=0.158 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHhcCccc
Q 018256 300 FVGAATIALGFYAVIWGQAKE 320 (359)
Q Consensus 300 ~iG~~lii~gi~l~~~~~~~~ 320 (359)
+.|.+.+++.+++..++++|+
T Consensus 74 ~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 74 MAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 345555555444444444444
No 121
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=69.97 E-value=1e+02 Score=29.23 Aligned_cols=14 Identities=7% Similarity=-0.299 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHHH
Q 018256 211 ICSIFVTILSSAVS 224 (359)
Q Consensus 211 ~~~~~~~~~~~~~~ 224 (359)
+.+-+..+.++...
T Consensus 36 lv~~~~lP~liF~~ 49 (385)
T PF03547_consen 36 LVFNVFLPALIFSS 49 (385)
T ss_pred HHHHHHHHHHHHHH
Confidence 33334444443333
No 122
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=67.32 E-value=4.5 Score=36.95 Aligned_cols=112 Identities=13% Similarity=0.004 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhcc------CC------CCCCCHHHHHHHHHHH
Q 018256 9 MVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRK------RT------PPQLTWSIVCRIFLLG 76 (359)
Q Consensus 9 ~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~------~~------~~~~~~~~~~~~~~~g 76 (359)
|+++.+|||......|++-. .-...+...+-+.++.++...++-+.... .. ..+-+++.....+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r-~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAER-RGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHh-cCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 45678999999999999433 22322334444444444443333222111 11 0233566667777788
Q ss_pred HHHHHHHHHHHHHhccCCcchhhhhhccch-HHHHHHHHHHhhcccc
Q 018256 77 LLSCCGQMFHYFGIENGSPALASAMIDLTP-GFTFILAIIFRMEKLE 122 (359)
Q Consensus 77 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~P-i~~~lls~l~~~E~~~ 122 (359)
++..+++++..+|+.+.+.+.+-.+..... +.-..+- .++..|.+
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~N-Yfld~~~n 125 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLN-YFLDPKIN 125 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeee-eeccCCCC
Confidence 888999999999999998888766664332 2222232 33355655
No 123
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=64.08 E-value=50 Score=29.59 Aligned_cols=42 Identities=12% Similarity=-0.113 Sum_probs=24.3
Q ss_pred HHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHH
Q 018256 262 WALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGA 303 (359)
Q Consensus 262 ~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~ 303 (359)
...++.++.....-+.+.-..=++-..+++.-.-....-.++
T Consensus 114 vcy~~gp~~~~rs~~~v~W~Lqligl~lI~~ss~~~~~a~~~ 155 (249)
T PF10225_consen 114 VCYRYGPPVDPRSRNFVKWALQLIGLVLIYFSSQDPEFAFAA 155 (249)
T ss_pred hhcccCCCccHhHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 335567777777777776666666555555544444433333
No 124
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=62.85 E-value=14 Score=27.99 Aligned_cols=46 Identities=15% Similarity=0.210 Sum_probs=39.1
Q ss_pred eeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCc
Q 018256 273 SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQA 318 (359)
Q Consensus 273 s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~ 318 (359)
+.+.-.-.+.++++.+.+-|.+|+...++|.++.++|+.++.+..+
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 4566777888999999999999999999999999999877776643
No 125
>PF15471 TMEM171: Transmembrane protein family 171
Probab=61.31 E-value=9.5 Score=34.05 Aligned_cols=25 Identities=12% Similarity=0.243 Sum_probs=20.0
Q ss_pred hhhHHHHHHHHHHHHHHHhcCcccc
Q 018256 297 LGSFVGAATIALGFYAVIWGQAKEE 321 (359)
Q Consensus 297 ~~~~iG~~lii~gi~l~~~~~~~~~ 321 (359)
..|++|-+++++|.+..+...-||+
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKKr 185 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKKR 185 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeeec
Confidence 3589999999999999998654443
No 126
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=57.45 E-value=1.3e+02 Score=26.02 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCcchh
Q 018256 68 IVCRIFLLGLLSCCGQMFHYFGIENGSPALA 98 (359)
Q Consensus 68 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a 98 (359)
.++..++.++...+.....+...+..++...
T Consensus 145 ~~~k~~~~~~~~~~~w~~~~~~~~~lp~~in 175 (206)
T PF06570_consen 145 SWWKYILISVLAMVLWIVIFVLTSFLPPVIN 175 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCC
Confidence 3344445555544455555555555665543
No 127
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=52.72 E-value=11 Score=23.63 Aligned_cols=17 Identities=18% Similarity=0.178 Sum_probs=9.4
Q ss_pred cchhhHHHHHHHHHHHH
Q 018256 295 LYLGSFVGAATIALGFY 311 (359)
Q Consensus 295 ~~~~~~iG~~lii~gi~ 311 (359)
|+|..++-.++|+.|++
T Consensus 2 p~wlt~iFsvvIil~If 18 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIF 18 (49)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 44555555555665553
No 128
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=51.91 E-value=10 Score=30.65 Aligned_cols=25 Identities=16% Similarity=0.219 Sum_probs=15.8
Q ss_pred cCCcceeeeccchhhHHHHHHHHHH
Q 018256 266 KKGPVYVSMFKPLGMVVALVFGIAF 290 (359)
Q Consensus 266 ~~~~~~~s~~~~l~pi~~~i~~~~~ 290 (359)
..+....+.+.|+.|.++.+++.++
T Consensus 71 EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 71 EKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455566677777777776664
No 129
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=50.92 E-value=1.5e+02 Score=25.54 Aligned_cols=24 Identities=4% Similarity=0.117 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 018256 175 TIGGIFLAAHSVILAIYYIVQAWI 198 (359)
Q Consensus 175 ~~G~~~~l~a~~~~a~~~vl~k~~ 198 (359)
.-+....++++++++++..+.||.
T Consensus 178 l~~~~~iiig~i~~~~~~~lkkk~ 201 (206)
T PF06570_consen 178 LPPWVYIIIGVIAFALRFYLKKKY 201 (206)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHh
Confidence 345677788899999987777765
No 130
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=49.52 E-value=1.6e+02 Score=24.85 Aligned_cols=38 Identities=18% Similarity=0.013 Sum_probs=20.1
Q ss_pred hhhhhhccchHHHH-HHHHHHhhccccceeccccccchhHHHHHhHH
Q 018256 97 LASAMIDLTPGFTF-ILAIIFRMEKLELRVQSSQAKSFGTVLLIGGA 142 (359)
Q Consensus 97 ~a~~l~~~~Pi~~~-lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv 142 (359)
......+..|+... ++...+.++|.. -..+..+++...
T Consensus 59 ~~~~~~~~~P~a~~~~l~~~l~~~~~a--------i~~~~~~sl~~~ 97 (194)
T PF07698_consen 59 DISYFPYLIPVAAAAMLLTILIDPRLA--------ILASLFLSLLAS 97 (194)
T ss_pred cchhhhhhhHHHHHHHHHHHHhcchHH--------HHHHHHHHHHHH
Confidence 44555566664433 334556677766 445555554433
No 131
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=46.78 E-value=6.5 Score=35.45 Aligned_cols=47 Identities=11% Similarity=0.142 Sum_probs=0.0
Q ss_pred CcchhhhhhccchHHHH-HHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 94 SPALASAMIDLTPGFTF-ILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 94 ~~~~a~~l~~~~Pi~~~-lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
+-+..+++.+.+-+.++ ++-+.++|.|+- - ....+.+++.++-.++.
T Consensus 48 t~~a~~vl~sfAvvliiIIiIImlF~RrLL-C----PLGlLCiilimi~lLv~ 95 (381)
T PF05297_consen 48 TQGALTVLYSFAVVLIIIIIIIMLFKRRLL-C----PLGLLCIILIMIVLLVS 95 (381)
T ss_dssp -----------------------------------------------------
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhc-C----cchHHHHHHHHHHHHHH
Confidence 33334444443333333 333444555542 1 34555555555444333
No 132
>TIGR00770 Dcu anaerobic c4-dicarboxylate membrane transporter family protein. These proteins are members of th C4-Dicarboxylate Uptake (Dcu) Family (TC 2.A.13). Most proteins in this family have 12 GES predicted transmembrane regions; however one member has 10 experimentally determined transmembrane regions with both the N- and C-termini localized to the periplasm. The two Escherichia coli proteins, DcuA and DcuB, transport aspartate, malate, fumarate and succinate, and function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively.
Probab=46.45 E-value=2.9e+02 Score=26.97 Aligned_cols=33 Identities=21% Similarity=-0.019 Sum_probs=19.3
Q ss_pred HHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256 109 TFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYK 149 (359)
Q Consensus 109 ~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~ 149 (359)
..+++.++.+-|.. ..--.+.+-+|++++++.-
T Consensus 3 ~~~~~~~~~g~r~g--------g~~~g~~g~~g~~~~~~~~ 35 (430)
T TIGR00770 3 IIVLLCIFLGARLG--------GIGLGYAGGLGVLILCFGF 35 (430)
T ss_pred ehHHHHHHHHHhhh--------hHHHHHHHHHHHHHHHHHc
Confidence 34566777777665 3333345566677766543
No 133
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=46.41 E-value=2.3e+02 Score=26.11 Aligned_cols=78 Identities=10% Similarity=0.072 Sum_probs=46.1
Q ss_pred cchhHHHHHhHHHHHHhhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHHHH-------HH-HHHHhhC
Q 018256 131 KSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYI-------VQ-AWIVRDY 202 (359)
Q Consensus 131 ~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v-------l~-k~~~~~~ 202 (359)
.+.|..++..|+..+ +..-+.. .+.....|.++..++.+.|....+ .. |+..++.
T Consensus 6 ~~f~~~mGtg~l~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~el 68 (330)
T PF03595_consen 6 AWFGMVMGTGGLSNL-LYLLPYH----------------FGGLAILSEVLFILALILFLVLLVLYLLRWIRYPKAFKAEL 68 (330)
T ss_dssp GGGHHHHHHHHHHHH-HHTTTTT----------------STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHh----------------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 788999999888887 3321111 144556777777777777766222 22 2233444
Q ss_pred CCchHHHHHHHHHHHHHHHHHHH
Q 018256 203 PAELMVTLICSIFVTILSSAVSL 225 (359)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
.||....++.....+...+....
T Consensus 69 ~~p~~~~f~~t~~m~~~~l~~~~ 91 (330)
T PF03595_consen 69 RHPVRSSFFPTFPMALMLLAAFI 91 (330)
T ss_dssp HSTTGGGGGGHHHHHHHHHHHHH
T ss_pred cCCcccchHHHHHHHHHHHHHHH
Confidence 45777777766666655555443
No 134
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=45.96 E-value=32 Score=28.60 Aligned_cols=12 Identities=17% Similarity=0.169 Sum_probs=6.6
Q ss_pred CCCCCCcccccc
Q 018256 334 KPSSPCVPLLIN 345 (359)
Q Consensus 334 ~~~~~~~~~~~~ 345 (359)
+|+.|..|+.++
T Consensus 136 ~~~~Em~pL~~d 147 (163)
T PF06679_consen 136 AENVEMAPLEED 147 (163)
T ss_pred cccceecccCCC
Confidence 345555577554
No 135
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=45.35 E-value=42 Score=26.87 Aligned_cols=17 Identities=18% Similarity=0.356 Sum_probs=10.3
Q ss_pred hhHHHHHHHHHHHHHHH
Q 018256 298 GSFVGAATIALGFYAVI 314 (359)
Q Consensus 298 ~~~iG~~lii~gi~l~~ 314 (359)
..++|..+++.|+....
T Consensus 88 ~~i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 88 SIIIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34566666666666555
No 136
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=43.06 E-value=2.1e+02 Score=24.34 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=22.5
Q ss_pred HHHHHHHhcCccchhhHHHHHHHHH--HHHHHHh
Q 018256 284 LVFGIAFLGDTLYLGSFVGAATIAL--GFYAVIW 315 (359)
Q Consensus 284 ~i~~~~~~ge~~~~~~~iG~~lii~--gi~l~~~ 315 (359)
-.+|..++.|-.-+....|.++.++ |.+...+
T Consensus 132 ~~iG~~Lyt~Y~l~fe~~s~lLLvAmIGAIvLa~ 165 (186)
T MTH00057 132 EVLGRVLYTDYYYLFILASFILLVAMIGAIVLTH 165 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4558888888888888888877764 4444443
No 137
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=40.01 E-value=2.2e+02 Score=23.69 Aligned_cols=52 Identities=19% Similarity=0.202 Sum_probs=31.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHH-----HhhCCCchHHHHHHHHHHHHHHHHHH
Q 018256 173 NWTIGGIFLAAHSVILAIYYIVQAWI-----VRDYPAELMVTLICSIFVTILSSAVS 224 (359)
Q Consensus 173 ~~~~G~~~~l~a~~~~a~~~vl~k~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (359)
+..-..+.++.++++|++..++-.-. ..+.|.|+.-..+.++.+.+.+....
T Consensus 129 ~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaFm 185 (193)
T COG4657 129 NFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAFM 185 (193)
T ss_pred hHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHc
Confidence 34555677788888888876654322 23456566666666666666655443
No 138
>PF15345 TMEM51: Transmembrane protein 51
Probab=39.88 E-value=27 Score=30.65 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhcCcccccccc
Q 018256 300 FVGAATIALGFYAVIWGQAKEEKMDE 325 (359)
Q Consensus 300 ~iG~~lii~gi~l~~~~~~~~~~~~~ 325 (359)
-.|.++.+.++|+-.+.|+|.....+
T Consensus 66 G~Gv~LLLLSICL~IR~KRr~rq~~e 91 (233)
T PF15345_consen 66 GSGVALLLLSICLSIRDKRRRRQGEE 91 (233)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 35778888899999988777654443
No 139
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=39.21 E-value=3.8e+02 Score=26.20 Aligned_cols=58 Identities=12% Similarity=0.006 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcC
Q 018256 247 YSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQ 317 (359)
Q Consensus 247 ~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~ 317 (359)
-.++++.-..|+.| -|+...|...-... . .--+..-+...++|.++.++.+.....+.
T Consensus 248 qssvv~~Y~~yL~~-SAlss~P~~~CNp~-----------~-~~~~~~~~~~~iig~i~~~~~v~yss~ra 305 (429)
T PF03348_consen 248 QSSVVSLYTTYLTW-SALSSEPDKECNPS-----------G-SRSGSWNTWQSIIGLIFTFVSVLYSSFRA 305 (429)
T ss_pred cHHHHHHHHHHHHH-HHHHcCCCcccCCc-----------c-cccCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 34555555666666 45666554444333 0 01233456777899999988887776553
No 140
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=37.68 E-value=40 Score=30.65 Aligned_cols=67 Identities=16% Similarity=0.293 Sum_probs=56.4
Q ss_pred HHHHHHHHhc-CCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhcCcccccc
Q 018256 257 SVFHTWALRK-KGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWGQAKEEKM 323 (359)
Q Consensus 257 ~~~~~~~l~~-~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~~~~~~~~ 323 (359)
-.+.+++++. ++....-++..-.++...++++++.|.+.+..|+....++-+|+++....+.+..+.
T Consensus 78 nv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 78 NVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred eeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 4456677765 677778888999999999999999999999999999999999999998876654433
No 141
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=37.01 E-value=1.8e+02 Score=22.23 Aligned_cols=32 Identities=9% Similarity=0.234 Sum_probs=23.8
Q ss_pred HHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 108 FTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 108 ~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
.-..++.+++||+++|. .++|.++.+.++.++
T Consensus 75 vF~~Fsv~~l~E~l~~n------~l~af~~i~~av~fi 106 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWN------YLWAFLCILGAVYFI 106 (108)
T ss_pred eeHHHHHHHhCCCccHH------HHHHHHHHHHhhhee
Confidence 34566788999999955 888888777666543
No 142
>PRK02237 hypothetical protein; Provisional
Probab=36.40 E-value=2e+02 Score=22.15 Aligned_cols=38 Identities=5% Similarity=0.099 Sum_probs=28.6
Q ss_pred cchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256 104 LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (359)
Q Consensus 104 ~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~ 147 (359)
..-+...+-.+.+-|+|++ +.+++|..++++|+.++.+
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd------~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPD------RWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHHHhcCcCCC------hhHHHhHHHHHHhHHHhee
Confidence 4444445556777778887 6799999999999988743
No 143
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=36.06 E-value=1.8e+02 Score=21.66 Aligned_cols=59 Identities=19% Similarity=0.148 Sum_probs=32.8
Q ss_pred HHHHhcCCcceeeeccchhhHHHHHHHHHH---hcCc-cchhhHHHHHHHHHHHHHHHhcCcc
Q 018256 261 TWALRKKGPVYVSMFKPLGMVVALVFGIAF---LGDT-LYLGSFVGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 261 ~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~---~ge~-~~~~~~iG~~lii~gi~l~~~~~~~ 319 (359)
..++++++...--.+-.+.-+.++++|.+. -++. +-...|.|+..=+++.-+..-..+|
T Consensus 22 Vq~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r 84 (93)
T PF06946_consen 22 VQAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNR 84 (93)
T ss_pred HHHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhh
Confidence 455666655555555555666666665543 2222 2333477777666766666544443
No 144
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=35.47 E-value=93 Score=22.94 Aligned_cols=57 Identities=11% Similarity=0.041 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256 240 IELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 240 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
..|...+.++++..++....-+|..+.. .....+-=+++..+|..++++|..+..+.
T Consensus 30 p~W~~p~m~~lmllGL~WiVvyYi~~~~--------------------i~pi~~lG~WN~~IGfg~~~~Gf~mt~rW 86 (87)
T PF06781_consen 30 PRWYAPLMLGLMLLGLLWIVVYYISGGQ--------------------IPPIPDLGNWNLAIGFGLMIVGFLMTMRW 86 (87)
T ss_pred CccHHHHHHHHHHHHHHHHhhhhcccCC--------------------CCCcccccchHHHHHHHHHHHHHHHHccc
Confidence 3577777777777777666555443332 01112222678899999999999887764
No 145
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=35.01 E-value=4.4e+02 Score=25.78 Aligned_cols=44 Identities=16% Similarity=0.070 Sum_probs=24.9
Q ss_pred cchhhHHHHHHHHHH-hcCccchhhHHHHHHHHHHHHHHHhcCccc
Q 018256 276 KPLGMVVALVFGIAF-LGDTLYLGSFVGAATIALGFYAVIWGQAKE 320 (359)
Q Consensus 276 ~~l~pi~~~i~~~~~-~ge~~~~~~~iG~~lii~gi~l~~~~~~~~ 320 (359)
....|+++.++..+. +... ......|.+++..|+.++.+.++++
T Consensus 395 ~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~y~~~~~~~ 439 (473)
T TIGR00905 395 ALIVGVIACVYSIWLLYAAG-LKYLLLGFILYAPGIIFYGRARKER 439 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344455555444333 3322 2345678888889987777654443
No 146
>COG4854 Predicted membrane protein [Function unknown]
Probab=34.63 E-value=1.6e+02 Score=22.77 Aligned_cols=28 Identities=25% Similarity=0.415 Sum_probs=22.2
Q ss_pred hhccccceeccccccchhHHHHHhHHHHHHhh
Q 018256 117 RMEKLELRVQSSQAKSFGTVLLIGGALIVTLY 148 (359)
Q Consensus 117 ~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~ 148 (359)
..||-|+| ..+.+.+-.++.|.+++.+.
T Consensus 64 vse~aSr~----TiqV~~is~Al~gavl~a~k 91 (126)
T COG4854 64 VSERASRR----TIQVFSISAALGGAVLLALK 91 (126)
T ss_pred HHHhhhhe----eEEEEEehHHHHHHHHHHhc
Confidence 35777777 67999999999999988653
No 147
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=34.60 E-value=30 Score=21.43 Aligned_cols=19 Identities=37% Similarity=0.709 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHhcCcc
Q 018256 301 VGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 301 iG~~lii~gi~l~~~~~~~ 319 (359)
+|.++++.+.+++.|++++
T Consensus 21 V~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred hHHHHHHHHHHhheEEecc
Confidence 3455566666666655554
No 148
>PF15102 TMEM154: TMEM154 protein family
Probab=33.47 E-value=40 Score=27.41 Aligned_cols=24 Identities=17% Similarity=0.055 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHhcCcccccc
Q 018256 300 FVGAATIALGFYAVIWGQAKEEKM 323 (359)
Q Consensus 300 ~iG~~lii~gi~l~~~~~~~~~~~ 323 (359)
+++.++++..++++.+.|||+.|.
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCC
Confidence 445555666677777766655533
No 149
>PF10101 DUF2339: Predicted membrane protein (DUF2339); InterPro: IPR019286 This entry, found in various hypothetical bacterial proteins, has no known function.
Probab=33.36 E-value=5.8e+02 Score=26.65 Aligned_cols=95 Identities=17% Similarity=0.152 Sum_probs=51.1
Q ss_pred HHHHHHHHhCC-CChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-HHH-HHHHHHHHHHhccCCcc
Q 018256 20 NTVTKAAMSRG-ASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLG-LLS-CCGQMFHYFGIENGSPA 96 (359)
Q Consensus 20 ~~~~k~~~~~~-~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~-~~~~~~~~~al~~~~~~ 96 (359)
..+.|++.+++ ++|..-+..-...+..+...-.+.++| +. +.....+..| +.. ....+.-+.=.+..|+.
T Consensus 19 ~fl~kya~~~g~l~p~~Rv~~g~~~g~~l~~~g~~l~~k-~~------~~~~~~L~g~G~a~ly~t~~aa~~~y~l~~~~ 91 (745)
T PF10101_consen 19 VFLLKYAIDAGWLGPAVRVALGAALGLALLAAGERLRRK-GY------RAFAQALAGGGIAVLYLTVFAAYHLYGLIPPP 91 (745)
T ss_pred HHHHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHHHHHc-cc------chHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 45678888865 778777777666666555433333332 11 1222222222 222 33333333335667777
Q ss_pred hhhhhhccchHHHHHHHHHHhhccc
Q 018256 97 LASAMIDLTPGFTFILAIIFRMEKL 121 (359)
Q Consensus 97 ~a~~l~~~~Pi~~~lls~l~~~E~~ 121 (359)
.+-.+....-..+..++....+|-+
T Consensus 92 ~af~~~~~v~~~~~~la~r~~~~~l 116 (745)
T PF10101_consen 92 VAFALLALVTAAAVALALRYDSPAL 116 (745)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 7777777777777777665444333
No 150
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=32.80 E-value=3.1e+02 Score=23.38 Aligned_cols=106 Identities=15% Similarity=0.101 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018256 11 TLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGI 90 (359)
Q Consensus 11 ~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al 90 (359)
+.+++-|.+..+.|.+.. .+-..++.. .+.+...+....++..|.+.+...+.. ++..+.......+-+...+.+-
T Consensus 107 ~~aLlsgitaff~~nA~~--~GlItlll~-a~vgGfamy~my~y~yr~~ad~sqr~~-~~K~~lv~~~sm~lWi~v~i~t 182 (226)
T COG4858 107 AMALLSGITAFFQKNAQV--YGLITLLLT-AVVGGFAMYIMYYYAYRMRADNSQRPG-TWKYLLVAVLSMLLWIAVMIAT 182 (226)
T ss_pred HHHHHHHHHHHHhcCCcc--hhHHHHHHH-HHhhhHHHHHHHHHHHHhhcccccCCc-hHHHHHHHHHHHHHHHHHHHHH
Confidence 455677777777777433 233333332 223333333332222221110111111 2333333333334444455666
Q ss_pred ccCCcchhhhhhccchHHHHHHH------HHHhhccccc
Q 018256 91 ENGSPALASAMIDLTPGFTFILA------IIFRMEKLEL 123 (359)
Q Consensus 91 ~~~~~~~a~~l~~~~Pi~~~lls------~l~~~E~~~~ 123 (359)
.+.|++..-. +-|+-..+.+ .+.+|.|.|.
T Consensus 183 ~~lPtslN~~---L~pi~l~IiGav~lalRfylkkk~NI 218 (226)
T COG4858 183 VFLPTSLNPQ---LPPIALTIIGAVILALRFYLKKKKNI 218 (226)
T ss_pred hhCCCcCCcC---CchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 6677665433 3344444333 4445555553
No 151
>PRK09412 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=31.26 E-value=5.1e+02 Score=25.31 Aligned_cols=34 Identities=24% Similarity=0.077 Sum_probs=21.2
Q ss_pred HHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256 108 FTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYK 149 (359)
Q Consensus 108 ~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~ 149 (359)
+..+++.++.+-|.. ..--.+.+-+|++++++.-
T Consensus 6 ~~~~~~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~ 39 (433)
T PRK09412 6 LIIVLLAIFLGARLG--------GIGIGFAGGLGVLILTFIF 39 (433)
T ss_pred HHHHHHHHHHhHhhh--------HHHHHHHHHHHHHHHHHhc
Confidence 456677777777665 4444455667777776543
No 152
>COG3302 DmsC DMSO reductase anchor subunit [General function prediction only]
Probab=30.92 E-value=4.2e+02 Score=24.21 Aligned_cols=51 Identities=10% Similarity=0.017 Sum_probs=26.5
Q ss_pred cchhHHHHHhHHHHHH----hhcCCCCCCCCCcccchhhhccCCCCchhHHHHHHHHHHHHHHHH
Q 018256 131 KSFGTVLLIGGALIVT----LYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIY 191 (359)
Q Consensus 131 ~~~g~~l~~~Gv~ll~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~ 191 (359)
+.+-++-++.|++.+. .+..+....|+++. .........++..+++.+++.
T Consensus 111 ~~~l~laav~Gvvfv~~m~~VY~~~tV~tW~~~~----------T~~~f~lT~~~~G~~l~~~ll 165 (281)
T COG3302 111 NLWLLLAAVLGVVFVWMMAQVYSITTVPTWHSGY----------TLLAFFLTVLMGGSALGAALL 165 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCccchHhhcc----------hHHHHHHHHHHHhHHHHHHHH
Confidence 5555777888877763 22333444443222 223344455566666665654
No 153
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=30.58 E-value=1e+02 Score=23.10 Aligned_cols=18 Identities=22% Similarity=0.540 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 018256 300 FVGAATIALGFYAVIWGQ 317 (359)
Q Consensus 300 ~iG~~lii~gi~l~~~~~ 317 (359)
++|.++++=+.+...|+-
T Consensus 50 f~Gi~lMlPAav~ivWR~ 67 (96)
T PF07214_consen 50 FVGIGLMLPAAVNIVWRV 67 (96)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456666664444555543
No 154
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=30.37 E-value=2.2e+02 Score=28.22 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=30.6
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHH
Q 018256 169 LPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMV 208 (359)
Q Consensus 169 ~~~~~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~ 208 (359)
+.+....+|.+.+.++.++-....++.++..+..++....
T Consensus 281 ~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~ 320 (493)
T KOG1330|consen 281 DHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTL 320 (493)
T ss_pred ccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccch
Confidence 4557778899999999999999999998877666543333
No 155
>KOG0682 consensus Ammonia permease [Inorganic ion transport and metabolism]
Probab=30.08 E-value=5.6e+02 Score=25.45 Aligned_cols=38 Identities=8% Similarity=0.146 Sum_probs=24.7
Q ss_pred HHHHHHHHHhhccccc-eeccccccchhHHHHHhHHHHH
Q 018256 108 FTFILAIIFRMEKLEL-RVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 108 ~~~lls~l~~~E~~~~-~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
+..+.+.+++|.|..+ +.+....+-=....++.|.+++
T Consensus 199 ~agl~~a~~lGpR~~r~~~~~~~~~~hsv~~v~LGt~lL 237 (500)
T KOG0682|consen 199 VAGLVAALILGPRIGRFFGKAIALRPHSVTLVVLGTFLL 237 (500)
T ss_pred HHHHHHHHHhCCccCcccccccccCCCchhHHHHHHHHH
Confidence 3455556667777763 3444555666677888888877
No 156
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=29.74 E-value=18 Score=32.78 Aligned_cols=15 Identities=13% Similarity=-0.128 Sum_probs=0.0
Q ss_pred ccccccchhHHHHHh
Q 018256 126 QSSQAKSFGTVLLIG 140 (359)
Q Consensus 126 ~~~~~~~~g~~l~~~ 140 (359)
..|++++++.++++.
T Consensus 133 GAs~WtiLaFcLAF~ 147 (381)
T PF05297_consen 133 GASFWTILAFCLAFL 147 (381)
T ss_dssp ---------------
T ss_pred hhHHHHHHHHHHHHH
Confidence 334566666666654
No 157
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=29.32 E-value=84 Score=28.32 Aligned_cols=130 Identities=12% Similarity=0.086 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCHHH-HHHHHHHHHHHHHHH
Q 018256 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSI-VCRIFLLGLLSCCGQ 83 (359)
Q Consensus 5 ~~~~~l~~~~~~g~~~~~~k~~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 83 (359)
+=.+++.++.+++.+++.-..... ..|-.++...-.+.++++-. +-.+..|... ..+.|.. ...++...++.++.+
T Consensus 167 GD~lvi~GATlYaVSNv~EEflvk-n~d~~elm~~lgLfGaIIsa-IQ~i~~~~~~-~tl~w~~~i~~yl~f~L~MFllY 243 (336)
T KOG2766|consen 167 GDFLVIAGATLYAVSNVSEEFLVK-NADRVELMGFLGLFGAIISA-IQFIFERHHV-STLHWDSAIFLYLRFALTMFLLY 243 (336)
T ss_pred CcEEEEecceeeeeccccHHHHHh-cCcHHHHHHHHHHHHHHHHH-HHHhhhccce-eeEeehHHHHHHHHHHHHHHHHH
Confidence 334556677788888887776334 67888888888888887765 3444444433 3344421 111122222223333
Q ss_pred HHHHHHhccCCcchhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 84 ~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
.+.-.=++..+++...+-.-++-.+..++ ..++-++. |...++......|.++-
T Consensus 244 sl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~------wLY~laF~~i~~GliiY 297 (336)
T KOG2766|consen 244 SLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVD------WLYFLAFATIATGLIIY 297 (336)
T ss_pred HhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchh------hhhHHHHHHHHHhhEEe
Confidence 33333344444444333334444555555 44555677 66888888888887765
No 158
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=29.26 E-value=23 Score=27.83 Aligned_cols=18 Identities=17% Similarity=0.170 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018256 242 LMAIGYSAIFAVSVRSVF 259 (359)
Q Consensus 242 ~~~~~~~g~~~~~~~~~~ 259 (359)
...++..|++.|+++|.+
T Consensus 56 G~vili~GvvvT~vays~ 73 (129)
T PF15099_consen 56 GVVILIAGVVVTAVAYSF 73 (129)
T ss_pred hHHHHHHhhHhheeeEee
Confidence 345666777778777766
No 159
>TIGR00544 lgt prolipoprotein diacylglyceryl transferase. The conversion of lipoprotein precursors into lipoproteins consists of three steps. First, the enzyme described by this model transfers a diacylglyceryl moiety from phosphatidylglycerol to the side chain of a Cys that will become the new N-terminus. Second, the signal peptide is removed by signal peptidase II. Finally, the free amino group of the new N-terminal Cys is acylated by apolipoprotein N-acyltransferase.
Probab=29.11 E-value=47 Score=30.27 Aligned_cols=25 Identities=12% Similarity=0.118 Sum_probs=20.2
Q ss_pred cchhhHHHHHHHHHHHHHHHhcCcc
Q 018256 295 LYLGSFVGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 295 ~~~~~~iG~~lii~gi~l~~~~~~~ 319 (359)
+|..|++...+++.|+++..+.++|
T Consensus 246 lt~~Q~~sl~~i~~g~~~~~~~~~~ 270 (278)
T TIGR00544 246 ISMGQILSLLMIAGILIIMLLAYKL 270 (278)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6889999999999999877654443
No 160
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=28.84 E-value=5.6e+02 Score=25.03 Aligned_cols=24 Identities=17% Similarity=0.131 Sum_probs=18.0
Q ss_pred hhhHHHHHHHHHHHHHHHhcCccc
Q 018256 297 LGSFVGAATIALGFYAVIWGQAKE 320 (359)
Q Consensus 297 ~~~~iG~~lii~gi~l~~~~~~~~ 320 (359)
....+|.++++.|+.++.+.++++
T Consensus 411 ~~~~~~~~~~~~g~~~y~~~~~~~ 434 (468)
T TIGR03810 411 KYLLLSAILYAPGIYFYARARKEK 434 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 356788899999998887755544
No 161
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=28.64 E-value=5.7e+02 Score=25.04 Aligned_cols=47 Identities=13% Similarity=0.180 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHH
Q 018256 175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSL 225 (359)
Q Consensus 175 ~~G~~~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (359)
-.|.++..+.=+++-+..++.| .+.+ |+.+.......+...++.+++
T Consensus 299 KYgiLFI~LTF~~fflfE~~~~---~~iH-piQY~LVGlAl~lFYlLLLSl 345 (430)
T PF06123_consen 299 KYGILFIGLTFLAFFLFELLSK---LRIH-PIQYLLVGLALVLFYLLLLSL 345 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---Cccc-HHHHHHHHHHHHHHHHHHHHH
Confidence 4667777665555555555555 3445 777777666666666666664
No 162
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=28.32 E-value=53 Score=25.12 Aligned_cols=39 Identities=8% Similarity=0.118 Sum_probs=29.3
Q ss_pred ccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHHHh
Q 018256 103 DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (359)
Q Consensus 103 ~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~ 147 (359)
...-+...+-.+.+-|+|++ +.+++|..++++|+.++.+
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd------~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPD------RWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCC------hHHHHhHHHHHHhHHheEe
Confidence 34444555556777777777 6799999999999998843
No 163
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=28.18 E-value=93 Score=17.86 Aligned_cols=13 Identities=23% Similarity=0.248 Sum_probs=6.7
Q ss_pred chhhHHHHHHHHH
Q 018256 296 YLGSFVGAATIAL 308 (359)
Q Consensus 296 ~~~~~iG~~lii~ 308 (359)
+...++|.+++..
T Consensus 11 ~~~~~~G~~l~~~ 23 (34)
T TIGR01167 11 SLLLLLGLLLLGL 23 (34)
T ss_pred HHHHHHHHHHHHH
Confidence 4555666644433
No 164
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=27.44 E-value=19 Score=29.70 Aligned_cols=13 Identities=23% Similarity=0.311 Sum_probs=5.9
Q ss_pred cchhhHHHHHHHH
Q 018256 276 KPLGMVVALVFGI 288 (359)
Q Consensus 276 ~~l~pi~~~i~~~ 288 (359)
.|+-|+++++.+.
T Consensus 81 vYllPLl~li~ga 93 (154)
T PRK10862 81 VYMTPLVGLFLGA 93 (154)
T ss_pred HHHHHHHHHHHHH
Confidence 3444555444443
No 165
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=27.35 E-value=19 Score=28.74 Aligned_cols=42 Identities=17% Similarity=0.107 Sum_probs=19.9
Q ss_pred eeeccchhhHHHHHHHHHHhcCcc---chhhHHHHHHHHHHHHHHH
Q 018256 272 VSMFKPLGMVVALVFGIAFLGDTL---YLGSFVGAATIALGFYAVI 314 (359)
Q Consensus 272 ~s~~~~l~pi~~~i~~~~~~ge~~---~~~~~iG~~lii~gi~l~~ 314 (359)
.+.+.|+-|+++++.+.++. ..+ ....+++.+..++..++..
T Consensus 70 aa~l~Y~lPll~li~g~~l~-~~~~~~e~~~~l~~l~~l~~~~~~~ 114 (135)
T PF04246_consen 70 AAFLVYLLPLLALIAGAVLG-SYLGGSELWAILGGLLGLALGFLIL 114 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666666665532 221 4444444444443333333
No 166
>COG2917 Intracellular septation protein A [Cell division and chromosome partitioning]
Probab=26.90 E-value=2.6e+02 Score=23.53 Aligned_cols=62 Identities=15% Similarity=0.132 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhccCCcchhhhhhccchHHHHHHHHHHhh--ccccceeccccccchhHHHHHhHHHHHHhhc
Q 018256 80 CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRM--EKLELRVQSSQAKSFGTVLLIGGALIVTLYK 149 (359)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~l~~~~Pi~~~lls~l~~~--E~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~ 149 (359)
.+..+.+|.+.+..+.-.|+...-...+....+.++..| |+.+ ...++.+.+.|.+-+.+++
T Consensus 7 ~~Pli~FF~~yk~~~I~~AT~~livAt~i~l~~~w~~~rkv~km~--------l~s~~~v~vFG~lTl~f~~ 70 (180)
T COG2917 7 FGPLILFFAAYKVYGIYAATAVLIVATVIQLAILWIKYRKVEKMQ--------LISGVVVVVFGGLTLIFHN 70 (180)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH--------HHHHHHHHHhchhHhhccC
Confidence 344555666666655555666555556666666666655 3443 4556666777777665443
No 167
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=25.53 E-value=40 Score=29.21 Aligned_cols=46 Identities=15% Similarity=0.283 Sum_probs=27.7
Q ss_pred ceeeeccchhhHHHHHHHHHHhcCccc-hhhHHHH-HHHHHHHHHHHh
Q 018256 270 VYVSMFKPLGMVVALVFGIAFLGDTLY-LGSFVGA-ATIALGFYAVIW 315 (359)
Q Consensus 270 ~~~s~~~~l~pi~~~i~~~~~~ge~~~-~~~~iG~-~lii~gi~l~~~ 315 (359)
...+.+..+.|..+..+|..+-+-... ..+++|. ++++.|+.+...
T Consensus 34 l~ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~~mi~~ 81 (206)
T TIGR02840 34 LIIAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGIWIIYN 81 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH
Confidence 344555567777777777765443333 3566665 455578877653
No 168
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=25.13 E-value=5e+02 Score=23.21 Aligned_cols=30 Identities=10% Similarity=0.026 Sum_probs=22.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 018256 173 NWTIGGIFLAAHSVILAIYYIVQAWIVRDY 202 (359)
Q Consensus 173 ~~~~G~~~~l~a~~~~a~~~vl~k~~~~~~ 202 (359)
...+|.+++..+.+.||.=....|+..++.
T Consensus 125 ~~~lG~vc~~~nI~~~~sPL~~m~~VIktk 154 (243)
T KOG1623|consen 125 VSVLGIVCAVFNISMFAAPLSVIRKVIKTK 154 (243)
T ss_pred eeeeehhhhhhhHHhhhccHHhhhhheecC
Confidence 557899999888888888766666665553
No 169
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=25.07 E-value=8.5e+02 Score=25.87 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=28.8
Q ss_pred chhhhhhccchHHHHHHHHHHhhccccceeccccccchhHHHHHhHHHHH
Q 018256 96 ALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (359)
Q Consensus 96 ~~a~~l~~~~Pi~~~lls~l~~~E~~~~~~~~~~~~~~g~~l~~~Gv~ll 145 (359)
+.+.++..+.|+-.+.++...+.+|.+ ...++..+-.++|.+.+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~------~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGG------DKAFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhccc------chHHHHHHHHHHHHHHh
Confidence 566778889999999998887766643 11444444445555443
No 170
>PF08229 SHR3_chaperone: ER membrane protein SH3 ; InterPro: IPR013248 This family of proteins are membrane localised chaperones that are required for correct plasma membrane localisation of amino acid permeases (AAPs) []. Shr3 prevents AAPs proteins from aggregating and assists in their correct folding. In the absence of Shr3, AAPs are retained in the ER.
Probab=24.35 E-value=3e+02 Score=23.74 Aligned_cols=16 Identities=13% Similarity=0.129 Sum_probs=10.6
Q ss_pred cchhHHHHHhHHHHHH
Q 018256 131 KSFGTVLLIGGALIVT 146 (359)
Q Consensus 131 ~~~g~~l~~~Gv~ll~ 146 (359)
-+++....+.|++...
T Consensus 11 lIi~stsF~LG~lf~~ 26 (196)
T PF08229_consen 11 LIICSTSFLLGVLFSN 26 (196)
T ss_pred eehHhhHHHHHHHHHc
Confidence 4566666777777764
No 171
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=23.58 E-value=6.9e+02 Score=24.34 Aligned_cols=14 Identities=21% Similarity=0.285 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHH
Q 018256 300 FVGAATIALGFYAV 313 (359)
Q Consensus 300 ~iG~~lii~gi~l~ 313 (359)
+.|++.++.+++..
T Consensus 417 ~~~~~~~i~~~~~~ 430 (476)
T PLN00028 417 LMGVMIIACTLPVA 430 (476)
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444433
No 172
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=23.44 E-value=6.6e+02 Score=24.00 Aligned_cols=17 Identities=6% Similarity=-0.250 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHhc
Q 018256 250 IFAVSVRSVFHTWALRK 266 (359)
Q Consensus 250 ~~~~~~~~~~~~~~l~~ 266 (359)
.+...++.++..-++|+
T Consensus 114 ~~nGilGl~ll~GGlr~ 130 (366)
T PRK10599 114 VTGGLVGFSLLLGGRKF 130 (366)
T ss_pred HhccHHHHHHHHhcccc
Confidence 33555666666666655
No 173
>PLN02292 ferric-chelate reductase
Probab=23.09 E-value=72 Score=33.28 Aligned_cols=50 Identities=18% Similarity=0.176 Sum_probs=25.5
Q ss_pred HHHHHHHhcCccccccccc---ccccccCCCCCCCccccccCCCccccccccc
Q 018256 308 LGFYAVIWGQAKEEKMDED---HTEISGFKPSSPCVPLLINKSNTEDSRATFA 357 (359)
Q Consensus 308 ~gi~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (359)
.|.....|.+++..+++.+ +.+.+.+.|+.|.+.+.+.++-+...||++.
T Consensus 604 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rp~~~ 656 (702)
T PLN02292 604 TSTAAMLWNKKKYYKKSSQQVDNVDSPREIESSPQQLLVQRTNIHYGERPNLN 656 (702)
T ss_pred hhhHHHhhcccccccchhccccccccccccccCcccccccceeeeccCCCCHH
Confidence 5555556655433222221 1123344444455566665666668888863
No 174
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=22.82 E-value=1.3e+02 Score=19.71 Aligned_cols=14 Identities=21% Similarity=-0.057 Sum_probs=6.6
Q ss_pred HHHHHHHHHhcCcc
Q 018256 306 IALGFYAVIWGQAK 319 (359)
Q Consensus 306 ii~gi~l~~~~~~~ 319 (359)
++.|+.+....|++
T Consensus 14 ~lLg~~I~~~~K~y 27 (50)
T PF12606_consen 14 GLLGLSICTTLKAY 27 (50)
T ss_pred HHHHHHHHHHhhcc
Confidence 33455555544433
No 175
>PRK11469 hypothetical protein; Provisional
Probab=22.56 E-value=50 Score=28.20 Aligned_cols=43 Identities=14% Similarity=0.105 Sum_probs=27.3
Q ss_pred eeccchhhHHHHHHHHHHhcCccchhhHHHHHHH-HHHHHHHHh
Q 018256 273 SMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATI-ALGFYAVIW 315 (359)
Q Consensus 273 s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~li-i~gi~l~~~ 315 (359)
+..+.+.|..+...|..+-+=......|+|..+. ..|..+...
T Consensus 44 g~~q~~m~~~g~~~G~~l~~~i~~~~~~i~~~lL~~lG~~mi~e 87 (188)
T PRK11469 44 GAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIE 87 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677888877777655444445667777544 467776663
No 176
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=22.52 E-value=7.6e+02 Score=24.41 Aligned_cols=25 Identities=12% Similarity=0.141 Sum_probs=20.5
Q ss_pred cchhhHHHHHHHHHHHHHHHhcCcc
Q 018256 295 LYLGSFVGAATIALGFYAVIWGQAK 319 (359)
Q Consensus 295 ~~~~~~iG~~lii~gi~l~~~~~~~ 319 (359)
++..|++...++++|++++.+.+++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~~ 278 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPKG 278 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhcc
Confidence 6888999999999999888765443
No 177
>PRK00159 putative septation inhibitor protein; Reviewed
Probab=22.41 E-value=2.1e+02 Score=21.08 Aligned_cols=56 Identities=7% Similarity=0.015 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeeeccchhhHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHhc
Q 018256 241 ELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 241 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~s~~~~l~pi~~~i~~~~~~ge~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
.|...+..|++..++.+..-++..+. . -| +..+-=.++..+|..++++|..+..+.
T Consensus 31 ~W~~~~m~glm~~GllWlvvyYl~~~----~-------~P---------~m~~lG~WN~~IGFg~~i~G~lmt~rW 86 (87)
T PRK00159 31 VWYVVLMLGLMLIGLAWLVVNYLAGP----A-------IP---------WMADLGPWNYAIGFALMITGLLMTMRW 86 (87)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccC----C-------CC---------CCcccCchhHHHHHHHHHHHHHHhccc
Confidence 57777777877777777665544220 0 01 122333478899999999999887754
No 178
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.20 E-value=6.9e+02 Score=23.77 Aligned_cols=48 Identities=4% Similarity=0.082 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHhc
Q 018256 180 FLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAE 228 (359)
Q Consensus 180 ~~l~a~~~~a~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (359)
...++++.-=+|.++.|....+.+ ...+.+.....+.+....++.++.
T Consensus 54 vVqla~lgpLi~tllhk~~~~~i~-~VPiif~ll~~a~v~~l~laflW~ 101 (439)
T KOG4255|consen 54 VVQLANLGPLIVTLLHKGAPGTIP-TVPIIFVLLLLACVCQLGLAFLWH 101 (439)
T ss_pred HHHHHcchhHHHHHHHhhCCCcCC-CCCchhHHHHHHHHHHHHHHHHHh
Confidence 344455566666666665544444 667777777777777777776553
No 179
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=21.66 E-value=5.1e+02 Score=22.09 Aligned_cols=26 Identities=15% Similarity=0.041 Sum_probs=15.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHH
Q 018256 171 LSNWTIGGIFLAAHSVILAIYYIVQA 196 (359)
Q Consensus 171 ~~~~~~G~~~~l~a~~~~a~~~vl~k 196 (359)
++.+..|...-...+..+....+..+
T Consensus 76 ~~~Fl~gi~~n~~~~~~~l~S~lvr~ 101 (187)
T PF11361_consen 76 KDFFLPGIWTNAVYAVVFLVSVLVRW 101 (187)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 56667777666665555555444433
No 180
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=21.34 E-value=3.4e+02 Score=26.29 Aligned_cols=6 Identities=17% Similarity=-0.280 Sum_probs=2.3
Q ss_pred CChHHH
Q 018256 31 ASHFIL 36 (359)
Q Consensus 31 ~~p~~~ 36 (359)
.++...
T Consensus 51 ~s~~~~ 56 (455)
T TIGR00892 51 ATYSET 56 (455)
T ss_pred cchhHH
Confidence 343333
No 181
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=21.34 E-value=7.2e+02 Score=23.71 Aligned_cols=24 Identities=17% Similarity=0.282 Sum_probs=17.3
Q ss_pred CccchhhHHHHHHHHHHHHHHHhc
Q 018256 293 DTLYLGSFVGAATIALGFYAVIWG 316 (359)
Q Consensus 293 e~~~~~~~iG~~lii~gi~l~~~~ 316 (359)
...+..+-+++.++.+++|.....
T Consensus 161 ~~~~~~~s~~~avv~i~~Y~lfL~ 184 (368)
T COG0387 161 GNFSLGQSLFVAVVLIALYGLFLF 184 (368)
T ss_pred CcchHhHHHHHHHHHHHHHHHHHH
Confidence 455677788888888887776643
No 182
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=21.01 E-value=45 Score=24.60 Aligned_cols=19 Identities=16% Similarity=0.286 Sum_probs=13.3
Q ss_pred chhhHHHHHHHHHHHHHHH
Q 018256 296 YLGSFVGAATIALGFYAVI 314 (359)
Q Consensus 296 ~~~~~iG~~lii~gi~l~~ 314 (359)
+...++|.++.++|..+..
T Consensus 3 N~~Fl~~l~lliig~~~~v 21 (92)
T PF13038_consen 3 NILFLVGLILLIIGGFLFV 21 (92)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 3445778888887777766
No 183
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=20.76 E-value=1.5e+02 Score=20.63 Aligned_cols=21 Identities=10% Similarity=0.023 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHhcCccc
Q 018256 300 FVGAATIALGFYAVIWGQAKE 320 (359)
Q Consensus 300 ~iG~~lii~gi~l~~~~~~~~ 320 (359)
.++...+++|.+++....+++
T Consensus 7 Li~ICVaii~lIlY~iYnr~~ 27 (68)
T PF05961_consen 7 LIIICVAIIGLILYGIYNRKK 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHhccc
Confidence 455666667777776554443
No 184
>PRK10489 enterobactin exporter EntS; Provisional
Probab=20.27 E-value=7.3e+02 Score=23.36 Aligned_cols=19 Identities=16% Similarity=0.165 Sum_probs=9.8
Q ss_pred hHHHHHHHHHHHHHHHhcC
Q 018256 299 SFVGAATIALGFYAVIWGQ 317 (359)
Q Consensus 299 ~~iG~~lii~gi~l~~~~~ 317 (359)
.+.|....+++++.....+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 382 SASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 3455555555655555433
Done!