BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018261
(359 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224128336|ref|XP_002320304.1| predicted protein [Populus trichocarpa]
gi|222861077|gb|EEE98619.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 288/359 (80%), Positives = 311/359 (86%), Gaps = 6/359 (1%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MAGGKIRKEK + P GGISFHKSKGQHILKNPLLV+SIVQK+GIKSTDV+
Sbjct: 1 MAGGKIRKEKPSSRGAPSSNHY--QGGISFHKSKGQHILKNPLLVDSIVQKSGIKSTDVV 58
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LEIGPGTGNLTKKLLEAGKMV+A+ELD RMVLELQRRFQ T +SNRLKVIQGDVLKTDLP
Sbjct: 59 LEIGPGTGNLTKKLLEAGKMVVAIELDPRMVLELQRRFQGTAFSNRLKVIQGDVLKTDLP 118
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFDICVANIPYQISSPLTFKLL HQP+FRCAIIMFQ+EFAMRLVAQPGD LYCRLSVNTQ
Sbjct: 119 YFDICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDTLYCRLSVNTQ 178
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
L+ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNP EWDGF+RICFIRKNKTL S
Sbjct: 179 LYARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPKEWDGFIRICFIRKNKTLGS 238
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
IFR+KNVLSMLEKNY+TLQALQ QN S G+T D LGDS D SM +DDG+DDEM
Sbjct: 239 IFRIKNVLSMLEKNYKTLQALQQLQNGSSGSTNAEMDILGLGDSKEDHSMDMDDGTDDEM 298
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+VED D D GE SEFK KVLAVL+E + EKR+SKL+Q+EFL+LLS FN AGIHFS
Sbjct: 299 EVEDGDAD----GEASEFKQKVLAVLKERDYSEKRSSKLSQEEFLHLLSQFNMAGIHFS 353
>gi|255576485|ref|XP_002529134.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223531413|gb|EEF33247.1| dimethyladenosine transferase, putative [Ricinus communis]
Length = 350
Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust.
Identities = 291/362 (80%), Positives = 314/362 (86%), Gaps = 15/362 (4%)
Query: 1 MAGGKIRKEKGKQKSGP---YQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKST 57
MAGGKI+KEK KQ P YQG GISFHKSKGQHILKNPLLV++IV+K+GIKST
Sbjct: 1 MAGGKIKKEKVKQSRAPSNHYQG------GISFHKSKGQHILKNPLLVDTIVEKSGIKST 54
Query: 58 DVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
DVILEIGPGTGNLTKKLLEAGKMVIAVELD RMVLELQRRFQ TP SNRLKVIQGDVLKT
Sbjct: 55 DVILEIGPGTGNLTKKLLEAGKMVIAVELDPRMVLELQRRFQGTPMSNRLKVIQGDVLKT 114
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
DLPYFDICVANIPYQISSPLTFKLL HQP+FRCAIIMFQ+EFAMRLVAQPGD LYCRLSV
Sbjct: 115 DLPYFDICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRLVAQPGDTLYCRLSV 174
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKT 237
NTQL+ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVN EWDGF+RICFIRKNKT
Sbjct: 175 NTQLYARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNAKEWDGFIRICFIRKNKT 234
Query: 238 LSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
L SIFR+KNVLS+LEKNY+TLQAL SSQN+S ++ D LGD DQSM +DDGS
Sbjct: 235 LGSIFRIKNVLSLLEKNYKTLQALHSSQNASYEAADM--DISGLGDCKEDQSMELDDGSG 292
Query: 298 DEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIH 357
DEM+VED D DS +SEFK+KVLAVL+E F E+R+SKLTQ+EFLYLLS FN AGIH
Sbjct: 293 DEMEVEDGDADSG----MSEFKEKVLAVLKERNFYERRSSKLTQEEFLYLLSRFNMAGIH 348
Query: 358 FS 359
FS
Sbjct: 349 FS 350
>gi|225437553|ref|XP_002276165.1| PREDICTED: probable dimethyladenosine transferase-like [Vitis
vinifera]
Length = 350
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 271/362 (74%), Positives = 302/362 (83%), Gaps = 15/362 (4%)
Query: 1 MAGGKIRKEK---GKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKST 57
MAGGK++KEK G S YQG G++FHKSKGQHILKNPLLV+SIV+K+GIKST
Sbjct: 1 MAGGKMKKEKPSHGASASKHYQG------GVTFHKSKGQHILKNPLLVDSIVEKSGIKST 54
Query: 58 DVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
DVILEIGPGTGNLTKKLLEAGK VIAVE+D RMVLELQRRFQ TP SNRLKVIQGDVL+
Sbjct: 55 DVILEIGPGTGNLTKKLLEAGKSVIAVEVDPRMVLELQRRFQGTPLSNRLKVIQGDVLRC 114
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
DLPYFDICVANIPYQISSPLTFKLL H+P FRCA+IMFQ+EFAMRLVAQPGD LYCRLSV
Sbjct: 115 DLPYFDICVANIPYQISSPLTFKLLAHRPVFRCAVIMFQREFAMRLVAQPGDNLYCRLSV 174
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKT 237
NTQL ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP P VN EWDG +R+CF RKNKT
Sbjct: 175 NTQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPLPPVNFKEWDGLVRLCFNRKNKT 234
Query: 238 LSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
L SIFR K+VLS+LEKNY+T+QALQ S S G+ E D GD+N DQSM +DDG D
Sbjct: 235 LGSIFRQKSVLSLLEKNYKTVQALQLSGPS--GDAETEMDLTGFGDANEDQSMDLDDGRD 292
Query: 298 DEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIH 357
DEM+V D + GE S+FK+KVL +L++G FE+KR+SKLTQ +FLYLLSLFNK GIH
Sbjct: 293 DEMEVV----DGNAGGEASDFKEKVLNILKQGNFEDKRSSKLTQVDFLYLLSLFNKDGIH 348
Query: 358 FS 359
FS
Sbjct: 349 FS 350
>gi|147791996|emb|CAN77505.1| hypothetical protein VITISV_017803 [Vitis vinifera]
Length = 350
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/362 (74%), Positives = 302/362 (83%), Gaps = 15/362 (4%)
Query: 1 MAGGKIRKEK---GKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKST 57
MAGGK++KEK G S YQG G++FHKSKGQHILKNPLLV+SIV+K+GIKST
Sbjct: 1 MAGGKMKKEKPSHGASASKHYQG------GVTFHKSKGQHILKNPLLVDSIVEKSGIKST 54
Query: 58 DVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
DVILEIGPGTGNLTKKLLEAGK VIAVE+D RMVLELQRRFQ TP SNRL+VIQGDVL+
Sbjct: 55 DVILEIGPGTGNLTKKLLEAGKSVIAVEVDPRMVLELQRRFQGTPLSNRLEVIQGDVLRC 114
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
DLPYFDICVANIPYQISSPLTFKLL H+P FRCA+IMFQ+EFAMRLVAQPGD LYCRLSV
Sbjct: 115 DLPYFDICVANIPYQISSPLTFKLLAHRPVFRCAVIMFQREFAMRLVAQPGDNLYCRLSV 174
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKT 237
NTQL ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP P VN EWDG +R+CF RKNKT
Sbjct: 175 NTQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPLPPVNFKEWDGLVRLCFNRKNKT 234
Query: 238 LSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
L SIFR K+VLS+LEKNY+T+QALQ S S G+ E D GD+N DQSM +DDG D
Sbjct: 235 LGSIFRQKSVLSLLEKNYKTVQALQLSGPS--GDAETEMDLTGFGDANEDQSMDLDDGRD 292
Query: 298 DEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIH 357
DEM+V D + GE S+FK+KVL +L++G FE+KR+SKLTQ +FLYLLSLFNK GIH
Sbjct: 293 DEMEVV----DGNAGGEASDFKEKVLNILKQGNFEDKRSSKLTQVDFLYLLSLFNKXGIH 348
Query: 358 FS 359
FS
Sbjct: 349 FS 350
>gi|357455725|ref|XP_003598143.1| Dimethyladenosine transferase [Medicago truncatula]
gi|355487191|gb|AES68394.1| Dimethyladenosine transferase [Medicago truncatula]
Length = 351
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/366 (74%), Positives = 302/366 (82%), Gaps = 22/366 (6%)
Query: 1 MAGGKIRKEKGKQKS--GPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTD 58
MAGGKIRKEKGK S PYQG GISFHKSKGQHILKNPLLV++IVQK+GIK+TD
Sbjct: 1 MAGGKIRKEKGKPSSQHTPYQG------GISFHKSKGQHILKNPLLVDTIVQKSGIKTTD 54
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
V+LEIGPGTGNLTKKLLEAGK VIAVE+D RMVLEL +RFQ TP S+RL VIQGDVLKT+
Sbjct: 55 VVLEIGPGTGNLTKKLLEAGKKVIAVEIDPRMVLELNKRFQGTP-SSRLTVIQGDVLKTE 113
Query: 119 LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVN 178
LPYFDICVANIPYQISSPLTFKLL HQPAFRCAIIMFQ+EFAMRLVAQPGDKLYCRL+VN
Sbjct: 114 LPYFDICVANIPYQISSPLTFKLLKHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVN 173
Query: 179 TQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
TQLHAR+SHLLKVG+NNFRPPPKVDSSVVRIEP+KPR +VN EWDGFLRICF RKNKTL
Sbjct: 174 TQLHARISHLLKVGRNNFRPPPKVDSSVVRIEPKKPRHEVNQKEWDGFLRICFNRKNKTL 233
Query: 239 SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGV-----D 293
+IFR KNV+SMLEKNY+T+QAL+ SQ L + D + D DQ M + D
Sbjct: 234 GAIFRQKNVISMLEKNYKTVQALKLSQEGLLKEADTKVDFSNFADFVDDQGMEMDDDGVD 293
Query: 294 DGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNK 353
D +DEMDVED G SEFKDKVL VL+EG +EEKR+SKLT EF+YLLSLFNK
Sbjct: 294 DNDEDEMDVED--------GGPSEFKDKVLGVLKEGDYEEKRSSKLTLLEFIYLLSLFNK 345
Query: 354 AGIHFS 359
+GIHF+
Sbjct: 346 SGIHFT 351
>gi|297824837|ref|XP_002880301.1| hypothetical protein ARALYDRAFT_904217 [Arabidopsis lyrata subsp.
lyrata]
gi|297326140|gb|EFH56560.1| hypothetical protein ARALYDRAFT_904217 [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 278/365 (76%), Positives = 305/365 (83%), Gaps = 19/365 (5%)
Query: 1 MAGGKIRKEKGKQK----SGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKS 56
MAGGK+RKEK K S YQG GISFHKSKGQHILKNPLLV+SIVQKAGIKS
Sbjct: 1 MAGGKMRKEKPKASNRAPSNHYQG------GISFHKSKGQHILKNPLLVDSIVQKAGIKS 54
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
TDVILEIGPGTGNLTKKLLEAGK VIAVELDSRMVLELQRRFQ TPYSNRLKVIQGDVLK
Sbjct: 55 TDVILEIGPGTGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPYSNRLKVIQGDVLK 114
Query: 117 TDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS 176
T+LP FDICVANIPYQISSPLTFKLLFH +FRCA+IM+Q+EFAMRLVAQPGD LYCRLS
Sbjct: 115 TELPRFDICVANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLS 174
Query: 177 VNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNK 236
VNTQL+ARVSHLLKVGKNNFRPPPKVDSSVVRIEPR+P PQVN EWDGFLR+CFIRKNK
Sbjct: 175 VNTQLYARVSHLLKVGKNNFRPPPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNK 234
Query: 237 TLSSIFRLKNVLSMLEKNYRTLQA-LQSSQNSSLGNTEIGTDTPSLGDSNGDQSMG-VDD 294
TL SIF+ K+VLSMLEKNY+TLQA L S QN+ G+ + T GDQSMG DD
Sbjct: 235 TLGSIFKQKSVLSMLEKNYKTLQAVLASLQNN--GDAALNTSM-----DLGDQSMGMEDD 287
Query: 295 GSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKA 354
++ + D + D GE SEFK+KV+ VL+EG FEEKR+SKL+QQEFLYLLSLFNK+
Sbjct: 288 DNEMDDDDMEMDDGEGDGGETSEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKS 347
Query: 355 GIHFS 359
GIHF+
Sbjct: 348 GIHFT 352
>gi|15226591|ref|NP_182264.1| dimethyladenosine transferase [Arabidopsis thaliana]
gi|2529685|gb|AAC62868.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|14532650|gb|AAK64053.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|21280901|gb|AAM44912.1| putative dimethyladenosine transferase [Arabidopsis thaliana]
gi|330255745|gb|AEC10839.1| dimethyladenosine transferase [Arabidopsis thaliana]
Length = 353
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 279/365 (76%), Positives = 306/365 (83%), Gaps = 18/365 (4%)
Query: 1 MAGGKIRKEKGKQK----SGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKS 56
MAGGKIRKEK K S YQG GISFHKSKGQHILKNPLLV+SIVQKAGIKS
Sbjct: 1 MAGGKIRKEKPKASNRAPSNHYQG------GISFHKSKGQHILKNPLLVDSIVQKAGIKS 54
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
TDVILEIGPGTGNLTKKLLEAGK VIAVELDSRMVLELQRRFQ TP+SNRLKVIQGDVLK
Sbjct: 55 TDVILEIGPGTGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPFSNRLKVIQGDVLK 114
Query: 117 TDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS 176
T+LP FDICVANIPYQISSPLTFKLLFH +FRCA+IM+Q+EFAMRLVAQPGD LYCRLS
Sbjct: 115 TELPRFDICVANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLS 174
Query: 177 VNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNK 236
VNTQL+ARVSHLLKVGKNNFRPPPKVDSSVVRIEPR+P PQVN EWDGFLR+CFIRKNK
Sbjct: 175 VNTQLYARVSHLLKVGKNNFRPPPKVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNK 234
Query: 237 TLSSIFRLKNVLSMLEKNYRTLQA-LQSSQNSSLGNTEIGTDTPSLGDSNGDQSMG-VDD 294
TL SIF+ K+VLSMLEKN++TLQA L S QN N E +T S+ GDQSMG DD
Sbjct: 235 TLGSIFKQKSVLSMLEKNFKTLQAVLASLQN----NGEPALNTTSM--DLGDQSMGMEDD 288
Query: 295 GSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKA 354
++ + D + D GE SEFK+KV+ VL+EG FEEKR+SKL+QQEFLYLLSLFNK+
Sbjct: 289 DNEMDDDDMEMDEGEGDGGETSEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKS 348
Query: 355 GIHFS 359
GIHF+
Sbjct: 349 GIHFT 353
>gi|449479728|ref|XP_004155690.1| PREDICTED: probable dimethyladenosine transferase-like [Cucumis
sativus]
Length = 349
Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust.
Identities = 283/362 (78%), Positives = 302/362 (83%), Gaps = 16/362 (4%)
Query: 1 MAGGKIRKEKGKQKS---GPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKST 57
MAGGKIRKEK K + PYQG GISFHKSKGQHILKNPLLV+SIVQK+GIKST
Sbjct: 1 MAGGKIRKEKPKAAAKAATPYQG------GISFHKSKGQHILKNPLLVDSIVQKSGIKST 54
Query: 58 DVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
DVILEIGPGTGNLTKKLLE GKMVIAVELD RMVLELQRRFQ TPYS+RLKVIQGDVLKT
Sbjct: 55 DVILEIGPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKT 114
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
+LPYFDICVANIPYQISSPLTFKLL HQPAFRCAIIMFQ+EFAMRLVAQPGDKLYCRL+V
Sbjct: 115 ELPYFDICVANIPYQISSPLTFKLLNHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTV 174
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKT 237
NTQL ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR +V EWDGFLRICF RKNKT
Sbjct: 175 NTQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKT 234
Query: 238 LSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
L SIFR K+VLS+LEKNY+TL +L Q S GN D +L SN DQSM VD+ D
Sbjct: 235 LGSIFRQKSVLSLLEKNYKTLCSLNILQQGSGGN-----DDSALNYSNEDQSMEVDEDGD 289
Query: 298 DEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIH 357
+E +D EGE SEFK KV+ VL+EG FEEKR+SKLT QEFLYLLSLFNKAGIH
Sbjct: 290 EEEMDMEDGDAE--EGEASEFKGKVMGVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIH 347
Query: 358 FS 359
FS
Sbjct: 348 FS 349
>gi|449449575|ref|XP_004142540.1| PREDICTED: probable dimethyladenosine transferase-like [Cucumis
sativus]
Length = 349
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 283/362 (78%), Positives = 302/362 (83%), Gaps = 16/362 (4%)
Query: 1 MAGGKIRKEKGKQKS---GPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKST 57
MAGGKIRKEK K + PYQG GISFHKSKGQHILKNPLLV+SIVQK+GIKST
Sbjct: 1 MAGGKIRKEKPKAAAKAATPYQG------GISFHKSKGQHILKNPLLVDSIVQKSGIKST 54
Query: 58 DVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
DVILEIGPGTGNLTKKLLE GKMVIAVELD RMVLELQRRFQ TPYS+RLKVIQGDVLKT
Sbjct: 55 DVILEIGPGTGNLTKKLLECGKMVIAVELDPRMVLELQRRFQDTPYSSRLKVIQGDVLKT 114
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
+LPYFDICVANIPYQISSPLTFKLL HQPAFRCAIIMFQ+EFAMRLVAQPGDKLYCRL+V
Sbjct: 115 ELPYFDICVANIPYQISSPLTFKLLNHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTV 174
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKT 237
NTQL ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR +V EWDGFLRICF RKNKT
Sbjct: 175 NTQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKT 234
Query: 238 LSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
L SIFR K+VLS+LEKNY+TL +L Q S GN D +L SN DQSM VD+ D
Sbjct: 235 LGSIFRQKSVLSLLEKNYKTLCSLNILQQGSGGN-----DDSALDYSNEDQSMEVDEDGD 289
Query: 298 DEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIH 357
+E +D EGE SEFK KV+ VL+EG FEEKR+SKLT QEFLYLLSLFNKAGIH
Sbjct: 290 EEEMDMEDGDAE--EGEASEFKGKVMGVLKEGDFEEKRSSKLTLQEFLYLLSLFNKAGIH 347
Query: 358 FS 359
FS
Sbjct: 348 FS 349
>gi|356548063|ref|XP_003542423.1| PREDICTED: probable dimethyladenosine transferase-like [Glycine
max]
Length = 352
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/356 (73%), Positives = 286/356 (80%), Gaps = 29/356 (8%)
Query: 12 KQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLT 71
+QK PYQG GISFHKSKGQHILKNPLLV+SIV+KAG+KSTDVILEIGPGTGNLT
Sbjct: 16 QQKHMPYQG------GISFHKSKGQHILKNPLLVDSIVEKAGVKSTDVILEIGPGTGNLT 69
Query: 72 KKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPY 131
KKLLEAGK VIAVE+D RMVLELQRRFQ TP+SNRL VIQGDVLKT+LPYFDICVANIPY
Sbjct: 70 KKLLEAGKKVIAVEIDPRMVLELQRRFQGTPHSNRLTVIQGDVLKTELPYFDICVANIPY 129
Query: 132 QISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
QISSPLTFKLL H+PAFR AIIMFQ+EFAMRLVAQPGDKLYCRL+VNTQLHARV HLLKV
Sbjct: 130 QISSPLTFKLLKHEPAFRAAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARVFHLLKV 189
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
G+NNFRPPPKVDSSVVRIEPRKPR +V EWDGFLRICF RKNKTL SIFR K+V+S+L
Sbjct: 190 GRNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKSVISLL 249
Query: 252 EKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNG---------DQSMGVDDGSDDEMDV 302
EKNYRT++AL+ Q SL + D S GD G D M V+DG DE+
Sbjct: 250 EKNYRTVRALELGQEDSLKEVDAKMDFSSFGDDRGMEMDDDGADDDEMEVEDGEADEVQ- 308
Query: 303 EDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
SEFKDKVL VL+EG FEEKR+SKLT QEFLYLLSLFNK GIHF
Sbjct: 309 -------------SEFKDKVLGVLKEGDFEEKRSSKLTLQEFLYLLSLFNKTGIHF 351
>gi|147864926|emb|CAN81538.1| hypothetical protein VITISV_011853 [Vitis vinifera]
Length = 336
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/362 (71%), Positives = 289/362 (79%), Gaps = 29/362 (8%)
Query: 1 MAGGKIRKEK---GKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKST 57
MAGGK++KEK G S YQG G++FHKSKGQHILKNPLLV+SIV+K+GIKST
Sbjct: 1 MAGGKMKKEKPSHGASASKHYQG------GVTFHKSKGQHILKNPLLVDSIVEKSGIKST 54
Query: 58 DVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
DVILEIGPGTGNLTKKLLEAGK VIAVE+D RMVLELQRRFQ TP SNRLKVIQGDVL+
Sbjct: 55 DVILEIGPGTGNLTKKLLEAGKSVIAVEVDPRMVLELQRRFQGTPLSNRLKVIQGDVLRC 114
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
DLPYFDICVANIPYQISSPLTFKLL H+P FRCA+IMFQ+EFAMRLVAQPGD LYCRLS
Sbjct: 115 DLPYFDICVANIPYQISSPLTFKLLAHRPVFRCAVIMFQREFAMRLVAQPGDNLYCRLS- 173
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKT 237
VGKNNFRPPPKVDSSVVRIEPRKP P VN EWDG +R+CF RKNKT
Sbjct: 174 -------------VGKNNFRPPPKVDSSVVRIEPRKPLPPVNFKEWDGLVRLCFNRKNKT 220
Query: 238 LSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
L SIFR K+VLS+LEKNY+T+QALQ S S G+ E D GD+N DQSM +DDG D
Sbjct: 221 LGSIFRQKSVLSLLEKNYKTVQALQLSGPS--GDAETEMDLTGFGDANEDQSMDLDDGRD 278
Query: 298 DEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIH 357
DEM+V D + GE S+FK+KVL +L++G FE+KR+SKLTQ +FLYLLSLFNK GIH
Sbjct: 279 DEMEVV----DGNAGGEASDFKEKVLNILKQGNFEDKRSSKLTQVDFLYLLSLFNKDGIH 334
Query: 358 FS 359
FS
Sbjct: 335 FS 336
>gi|148907015|gb|ABR16651.1| unknown [Picea sitchensis]
Length = 346
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/359 (69%), Positives = 282/359 (78%), Gaps = 13/359 (3%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MAGGK RK + S + QG GI F KSKGQHILKNP+LV++IVQKAGIKSTD++
Sbjct: 1 MAGGKERKTRA---SAAQRHQG----GIQFQKSKGQHILKNPMLVQTIVQKAGIKSTDIV 53
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LEIGPGTGNLT KLLE K VIAVELD RMVLELQRR Q T + RL+VIQGDVLK++LP
Sbjct: 54 LEIGPGTGNLTMKLLEVAKKVIAVELDPRMVLELQRRVQGTSSAIRLQVIQGDVLKSELP 113
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFD+CVANIPYQISSPLTFKLL H+P FRCAIIMFQ+EFAMRLVA+PGD LYCRLSVNTQ
Sbjct: 114 YFDVCVANIPYQISSPLTFKLLSHRPIFRCAIIMFQREFAMRLVAKPGDNLYCRLSVNTQ 173
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
L ARVSHLLKVGKNNFRPPPKVDSSVVRIEPR P P ++ EWDG +R+CF RKNKTL +
Sbjct: 174 LLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRNPLPPISFKEWDGMVRLCFNRKNKTLGA 233
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
IFR K +LS+LEKNY+T QALQ +Q S N D LGD++ D SM +D G E
Sbjct: 234 IFRQKAILSLLEKNYKTFQALQEAQQKS--NESSFGDVSILGDTSNDVSMDIDAG---ED 288
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
D D EG S+FKDKVL +L+EG FE+KR+SKL Q +FLYLLSLFNKAGIHF+
Sbjct: 289 QDMDVDDADMQEG-ASQFKDKVLNILKEGGFEDKRSSKLAQDDFLYLLSLFNKAGIHFN 346
>gi|226500226|ref|NP_001150423.1| LOC100284053 [Zea mays]
gi|195639144|gb|ACG39040.1| dimethyladenosine transferase [Zea mays]
gi|413935817|gb|AFW70368.1| dimethyladenosine transferase [Zea mays]
Length = 354
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 283/360 (78%), Gaps = 7/360 (1%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MAGGKI+K ++ G G L GGI F KSKGQHIL+NP LV+SIV KAG+K TD +
Sbjct: 1 MAGGKIQK----KRHGAAGGARL-QGGIPFEKSKGQHILRNPALVDSIVAKAGLKPTDTV 55
Query: 61 LEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
LEIGPGTGNLTK+LLEAG K V+AVELD RMVLEL RRFQ P S+RLKVIQGDVLK DL
Sbjct: 56 LEIGPGTGNLTKRLLEAGVKAVVAVELDPRMVLELNRRFQGHPLSSRLKVIQGDVLKCDL 115
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFDICVANIPYQISSPLTFKLL H+P FRCA+IMFQ+EFAMRLVAQPGD LYCRLSVN
Sbjct: 116 PYFDICVANIPYQISSPLTFKLLSHRPIFRCAVIMFQREFAMRLVAQPGDSLYCRLSVNV 175
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL +RVSHLLKVG+NNFRPPPKVDSSVVRIEPRKP P V+ EWDG +RICF RKNKTL
Sbjct: 176 QLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVRICFNRKNKTLG 235
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
S+F+ K VL +LEKNY+T+Q+LQ+ Q++ +G ++ D +L +N + M ++ G D E
Sbjct: 236 SLFKQKRVLELLEKNYKTMQSLQTVQDAEMGEEKMSADDVAL-LANMVEDMSMETGYDKE 294
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
D + D + FK+K++ +L++G F EKR SKL+Q +FLYLLSLFNKAGIHFS
Sbjct: 295 DDEMEMDDADMAGDGAASFKEKIMGILQQGDFAEKRGSKLSQVDFLYLLSLFNKAGIHFS 354
>gi|242060710|ref|XP_002451644.1| hypothetical protein SORBIDRAFT_04g005150 [Sorghum bicolor]
gi|241931475|gb|EES04620.1| hypothetical protein SORBIDRAFT_04g005150 [Sorghum bicolor]
Length = 359
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/360 (65%), Positives = 282/360 (78%), Gaps = 2/360 (0%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MAGGKI+K++ G G GGI F KSKGQHILKNP LV+SIV KAG+K TD +
Sbjct: 1 MAGGKIQKKRHGAAGGAGGGGARLQGGIPFEKSKGQHILKNPALVDSIVAKAGLKPTDTV 60
Query: 61 LEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
LEIGPGTGNLTK+LLEAG K V+AVELD RMVLEL RRFQ P S+RLKVIQGDVLK DL
Sbjct: 61 LEIGPGTGNLTKRLLEAGVKAVVAVELDPRMVLELNRRFQGHPLSSRLKVIQGDVLKCDL 120
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFDICVANIPYQISSPLTFKLL H+P FRCA+IMFQ+EFAMRLVAQPGD LYCRLSVN
Sbjct: 121 PYFDICVANIPYQISSPLTFKLLSHRPIFRCAVIMFQREFAMRLVAQPGDTLYCRLSVNV 180
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL +RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP P V+ EWDG +RICF RKN+TL
Sbjct: 181 QLLSRVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVRICFNRKNRTLG 240
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
S+F+ K VL +LEKNY+T+Q+LQ ++++ +G ++ D +L +N + + ++ G + E
Sbjct: 241 SLFKTKRVLELLEKNYKTMQSLQLTRDADMGEQKMSADDVAL-LANMVEDLNMETGDEKE 299
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
D + D + FK+K++ +L++G F EKR SKL+Q +FLYLLSLFNKAGIHFS
Sbjct: 300 DDEMEMDDADMAGDGAASFKEKIMGILQQGDFAEKRGSKLSQVDFLYLLSLFNKAGIHFS 359
>gi|357144702|ref|XP_003573385.1| PREDICTED: probable dimethyladenosine transferase-like
[Brachypodium distachyon]
Length = 354
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/361 (65%), Positives = 280/361 (77%), Gaps = 9/361 (2%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MAGGKI+K K G GGI F KSKGQHILKNP LV+SI+ KAG+K TD +
Sbjct: 1 MAGGKIQK-----KRQGGGGGARLQGGIPFEKSKGQHILKNPALVDSIIAKAGLKPTDTV 55
Query: 61 LEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
LEIGPGTGNLTK+LLEAG K V+AVELD RMVLEL RRFQ P S+RLKVIQGDVLK DL
Sbjct: 56 LEIGPGTGNLTKRLLEAGVKAVVAVELDPRMVLELSRRFQGHPLSSRLKVIQGDVLKCDL 115
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFDICVANIPYQISSPLTFKLL H+P FRCA+IMFQ+EFAMRLVAQPGD LYCRLSVN
Sbjct: 116 PYFDICVANIPYQISSPLTFKLLSHRPIFRCAVIMFQREFAMRLVAQPGDTLYCRLSVNV 175
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL +RVSHLLKVG+NNFRPPPKVDSSVVRIEPRKP P V+ EWDG +R+CF RKNKTL
Sbjct: 176 QLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVRVCFNRKNKTLG 235
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGT-DTPSLGDSNGDQSMGVDDGSDD 298
+IF+ K VL +LEKNY+T+Q+LQ +Q+S +G ++ D L + D SM + +
Sbjct: 236 AIFKQKRVLELLEKNYKTMQSLQLAQDSEMGEEKMSPGDVAVLANMVEDLSM--ETCDEK 293
Query: 299 EMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
E D + D V + + FK+K++ +L++G F EKR+SKL+Q +FLYLLSLFNKAG+HF
Sbjct: 294 EDDEMEMDDADMVGDDRASFKEKIMGILQQGDFAEKRSSKLSQVDFLYLLSLFNKAGVHF 353
Query: 359 S 359
S
Sbjct: 354 S 354
>gi|115481328|ref|NP_001064257.1| Os10g0183900 [Oryza sativa Japonica Group]
gi|110288720|gb|ABG65951.1| dimethyladenosine transferase, putative, expressed [Oryza sativa
Japonica Group]
gi|113638866|dbj|BAF26171.1| Os10g0183900 [Oryza sativa Japonica Group]
gi|215704636|dbj|BAG94264.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184228|gb|EEC66655.1| hypothetical protein OsI_32926 [Oryza sativa Indica Group]
Length = 364
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/364 (64%), Positives = 282/364 (77%), Gaps = 5/364 (1%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGA----GGISFHKSKGQHILKNPLLVESIVQKAGIKS 56
MAGGKI+K++ +G G G G GGI F KSKGQHIL+NP LV+SIV+KAG+K
Sbjct: 1 MAGGKIQKKRHGGGAGGGGGGGGGGARLQGGIPFEKSKGQHILRNPALVDSIVEKAGLKP 60
Query: 57 TDVILEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVL 115
TD +LEIGPGTGNLTK+LL+AG K V+AVELD RMVLEL RRFQ P ++RLKVIQGDVL
Sbjct: 61 TDTVLEIGPGTGNLTKRLLQAGVKAVVAVELDPRMVLELNRRFQGDPLASRLKVIQGDVL 120
Query: 116 KTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRL 175
K DLPYFDICVANIPYQISSPLTFKLL H+P FRCA+IMFQ+EFAMRLVAQPGD LYCRL
Sbjct: 121 KCDLPYFDICVANIPYQISSPLTFKLLSHRPIFRCAVIMFQREFAMRLVAQPGDSLYCRL 180
Query: 176 SVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKN 235
SVN QL +RVSHLLKVG+NNFRPPPKVDSSVVRIEPRKP P V+ EWDG +R+CF RKN
Sbjct: 181 SVNVQLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVRLCFNRKN 240
Query: 236 KTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDG 295
KTL +IF+ K VL +LEKNY+T+Q+LQ + ++ G ++ D +L S D
Sbjct: 241 KTLGAIFKQKRVLELLEKNYKTMQSLQLTSDAEKGEEKMSPDDVALLSSMVDDMNMESSY 300
Query: 296 SDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAG 355
+D+ D + D V + FK+K++ +L++G F EKRASKL+Q +FLYLLSLFNKAG
Sbjct: 301 ENDDDDEMEMDDADMVVESRACFKEKIMGILQQGDFAEKRASKLSQVDFLYLLSLFNKAG 360
Query: 356 IHFS 359
IHFS
Sbjct: 361 IHFS 364
>gi|363814491|ref|NP_001242880.1| uncharacterized protein LOC100819707 [Glycine max]
gi|255636797|gb|ACU18732.1| unknown [Glycine max]
Length = 308
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/297 (75%), Positives = 246/297 (82%), Gaps = 15/297 (5%)
Query: 12 KQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLT 71
+QK PYQG GISFHKSKGQHILKNPLLV+SIV+KAG+KSTDVILEIGPGTGNLT
Sbjct: 16 QQKHMPYQG------GISFHKSKGQHILKNPLLVDSIVEKAGVKSTDVILEIGPGTGNLT 69
Query: 72 KKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPY 131
KKLLEAGK VIA+E+D RMVLELQRRFQ TP+SNRL VIQGDVLKT+LPYFDICVANIPY
Sbjct: 70 KKLLEAGKKVIAIEIDPRMVLELQRRFQGTPHSNRLTVIQGDVLKTELPYFDICVANIPY 129
Query: 132 QISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
QISSPLTFKLL H+PAFR AIIMFQ+EFAMRLVAQPGDKLYCRL+VNTQLHARV HLLKV
Sbjct: 130 QISSPLTFKLLKHEPAFRAAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARVFHLLKV 189
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
G+NNFRPPPKVDSSVVRIEPRKPR +V EWDGFLRICF RKNKTL SIFR K+V+S+L
Sbjct: 190 GRNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKSVISLL 249
Query: 252 EKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNG---------DQSMGVDDGSDDE 299
EKNYRT++AL+ Q SL + D S GD G D M V+DG DE
Sbjct: 250 EKNYRTVRALELGQEDSLKEVDAKMDFSSFGDDQGMEMDDDGADDDEMEVEDGEADE 306
>gi|357136909|ref|XP_003570045.1| PREDICTED: probable dimethyladenosine transferase-like
[Brachypodium distachyon]
Length = 355
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/360 (62%), Positives = 277/360 (76%), Gaps = 6/360 (1%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MAGGKI+K++ G + QG GI F KSKGQHILKNP LV+SI+ KAG+K TD +
Sbjct: 1 MAGGKIQKKRQVGGGGRARLQG----GIPFEKSKGQHILKNPALVDSIIAKAGLKPTDTV 56
Query: 61 LEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
LEIGPGTGNLTK+LLEAG K V+AVELD RMVLEL RRFQ P +++VIQGDVLK DL
Sbjct: 57 LEIGPGTGNLTKRLLEAGVKAVVAVELDPRMVLELSRRFQGHPLLAQMQVIQGDVLKCDL 116
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFDICVANIPYQISSPLTFKLL H P FRCA+IMFQ+EFAMRLVAQPGD LYCRLSVN
Sbjct: 117 PYFDICVANIPYQISSPLTFKLLSHPPIFRCAVIMFQREFAMRLVAQPGDTLYCRLSVNV 176
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL +RVSHLLKVG+NNFRPPPKVDSSVVRIEPRKP P V+ EWDG +R+CF RKNKTL
Sbjct: 177 QLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVRVCFNRKNKTLG 236
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
+IF+ K VL +LEKNY+T+Q+LQ +Q+S +G ++ D ++ +N + + ++ + E
Sbjct: 237 AIFKQKRVLELLEKNYKTMQSLQLAQDSEMGEEKMSPDDVAV-LANMVEDLSMETCDEKE 295
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
D + D + K+K++ L++G F +KR+SKL+Q +FLY LSLFNKAG+HFS
Sbjct: 296 DDEMEMDDADMAGDGRASLKEKIMGTLQQGDFADKRSSKLSQVDFLYSLSLFNKAGVHFS 355
>gi|168033422|ref|XP_001769214.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679479|gb|EDQ65926.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 302
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/359 (62%), Positives = 259/359 (72%), Gaps = 57/359 (15%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MAGGK KGK +QG I F KSKGQHILKNPLLV+SIVQKAG+KSTD++
Sbjct: 1 MAGGK--AVKGKPAPQRFQG-------IQFQKSKGQHILKNPLLVQSIVQKAGLKSTDIV 51
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LEIGPGTGNLT KLLE K V+AVELD RMVLE+ RR Q TPY+N+L+VIQGD+LKT+LP
Sbjct: 52 LEIGPGTGNLTMKLLEVCKKVVAVELDPRMVLEVTRRVQGTPYANKLQVIQGDILKTELP 111
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFD+CVAN+PYQISSP+TFKLL H+P FRCA+IMFQKEFA RLVAQPGD L+CRLSVNTQ
Sbjct: 112 YFDVCVANVPYQISSPITFKLLSHRPLFRCAVIMFQKEFAQRLVAQPGDSLFCRLSVNTQ 171
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
L ARV HLLKVGKNNFRPPPKVDSSVVRIEPR P P +N EWDG +R+CF RKNKTL S
Sbjct: 172 LLARVFHLLKVGKNNFRPPPKVDSSVVRIEPRNPLPPINFKEWDGLIRLCFNRKNKTLGS 231
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
IFR K VL+++EKNY+T QALQ + GNT
Sbjct: 232 IFRQKAVLALIEKNYKTFQALQEAG----GNT---------------------------- 259
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
FK+K L VL EG +E+KR+SKLTQ +FL LL+LFNKAG+HF+
Sbjct: 260 ----------------FFKEKCLGVLAEGGYEDKRSSKLTQDDFLRLLALFNKAGVHFT 302
>gi|297743975|emb|CBI36945.3| unnamed protein product [Vitis vinifera]
Length = 284
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/362 (62%), Positives = 253/362 (69%), Gaps = 81/362 (22%)
Query: 1 MAGGKIRKEK---GKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKST 57
MAGGK++KEK G S YQG G++FHKSKGQHILKNPLLV+SIV+K+GIKST
Sbjct: 1 MAGGKMKKEKPSHGASASKHYQG------GVTFHKSKGQHILKNPLLVDSIVEKSGIKST 54
Query: 58 DVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
DVILEIGPGTGNLTKKLLEAGK VIAVE+D RMVLELQRRFQ TP SNRLKVIQGDVL+
Sbjct: 55 DVILEIGPGTGNLTKKLLEAGKSVIAVEVDPRMVLELQRRFQGTPLSNRLKVIQGDVLRC 114
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
DLPYFDICVANIPYQISSPLTFKLL H+P FRCA+IMFQ+EFAMRLVAQPGD LYCRLS
Sbjct: 115 DLPYFDICVANIPYQISSPLTFKLLAHRPVFRCAVIMFQREFAMRLVAQPGDNLYCRLS- 173
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKT 237
VDSSVVRIEPRKP P VN EWDG +R+CF RKNKT
Sbjct: 174 ------------------------VDSSVVRIEPRKPLPPVNFKEWDGLVRLCFNRKNKT 209
Query: 238 LSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
L SIFR K+VLS+LEKNY+T+QALQ S
Sbjct: 210 LGSIFRQKSVLSLLEKNYKTVQALQLSG-------------------------------- 237
Query: 298 DEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIH 357
GE S+FK+KVL +L++G FE+KR+SKLTQ +FLYLLSLFNK GIH
Sbjct: 238 ---------------GEASDFKEKVLNILKQGNFEDKRSSKLTQVDFLYLLSLFNKDGIH 282
Query: 358 FS 359
FS
Sbjct: 283 FS 284
>gi|302821163|ref|XP_002992246.1| hypothetical protein SELMODRAFT_186635 [Selaginella moellendorffii]
gi|300140013|gb|EFJ06743.1| hypothetical protein SELMODRAFT_186635 [Selaginella moellendorffii]
Length = 312
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 250/334 (74%), Gaps = 42/334 (12%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
GGI F+KS+GQHILKNPL+V+SIVQKAG+KSTD++LEIGPGTGNLT KLLE K VIAVE
Sbjct: 20 GGIQFYKSRGQHILKNPLIVQSIVQKAGLKSTDIVLEIGPGTGNLTVKLLEVAKKVIAVE 79
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQ 145
LD RMVLELQRR Q TP +N L++IQGDVLKT+LPYFD+CVANIPYQISSPLTFKLL H+
Sbjct: 80 LDPRMVLELQRRVQGTPQANHLQIIQGDVLKTELPYFDVCVANIPYQISSPLTFKLLSHR 139
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P FR A+IMFQKEFAMRLVA+P D LYCRLSVNTQL ARV HLLKVGKNNFRPPPKVDSS
Sbjct: 140 PLFRAAVIMFQKEFAMRLVAKPADPLYCRLSVNTQLLARVDHLLKVGKNNFRPPPKVDSS 199
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
VVRIEPR P P V+ EWDG +R+CF RKNKTL SIFR KNV+ ++E+N + + A
Sbjct: 200 VVRIEPRNPLPPVSFKEWDGLVRLCFNRKNKTLGSIFRQKNVVQLVERNRKAVMA----- 254
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
++D MDV+DD G + K+ +L +
Sbjct: 255 ------------------------------NEDGMDVDDD-------GSKCQTKEMLLEI 277
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
L +G++ +KR+SKLTQ +FL LL+ FNKAG+HFS
Sbjct: 278 LEKGKYLDKRSSKLTQDDFLTLLASFNKAGVHFS 311
>gi|302800922|ref|XP_002982218.1| hypothetical protein SELMODRAFT_116036 [Selaginella moellendorffii]
gi|300150234|gb|EFJ16886.1| hypothetical protein SELMODRAFT_116036 [Selaginella moellendorffii]
Length = 312
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/334 (63%), Positives = 250/334 (74%), Gaps = 42/334 (12%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
GGI F+KS+GQHILKNPL+V+SIVQKAG+KSTD++LEIGPGTGNLT KLLE K VIAVE
Sbjct: 20 GGIQFYKSRGQHILKNPLVVQSIVQKAGLKSTDIVLEIGPGTGNLTVKLLEVAKKVIAVE 79
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQ 145
LD RMVLELQRR Q TP +N L++IQGDVLKT+LPYFD+CVANIPYQISSPLTFKLL H+
Sbjct: 80 LDPRMVLELQRRVQGTPQANHLQIIQGDVLKTELPYFDVCVANIPYQISSPLTFKLLSHR 139
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P FR A+IMFQKEFAMRLVA+P D LYCRLSVNTQL ARV HLLKVGKNNFRPPPKVDSS
Sbjct: 140 PLFRAAVIMFQKEFAMRLVAKPADPLYCRLSVNTQLLARVDHLLKVGKNNFRPPPKVDSS 199
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
VVRIEPR P P V+ EWDG +R+CF RKNKTL SIFR KNV+ ++E+N + + A
Sbjct: 200 VVRIEPRNPLPPVSFKEWDGLVRLCFNRKNKTLGSIFRQKNVVQLVERNRKAVMA----- 254
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
++D MDV+DD G + K+ +L +
Sbjct: 255 ------------------------------NEDGMDVDDD-------GSKCQTKEMLLEI 277
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
L +G++ +KR+SKLTQ +FL LL+ FNKAG+HFS
Sbjct: 278 LEKGKYLDKRSSKLTQDDFLTLLASFNKAGVHFS 311
>gi|384251803|gb|EIE25280.1| dimethyladenosine transferase [Coccomyxa subellipsoidea C-169]
Length = 362
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/360 (58%), Positives = 267/360 (74%), Gaps = 9/360 (2%)
Query: 2 AGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
A G++ K+ KQ G G GI F KSKGQHILKNP +V+SIV KAG+KSTDV+L
Sbjct: 9 AAGRVLKKSSKQGIG-------GNSGIEFLKSKGQHILKNPQVVQSIVDKAGVKSTDVVL 61
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
EIGPGTGNLT KLLE K VIAVE+D RMVLELQRR Q T +++ L++IQGDV+K DLP+
Sbjct: 62 EIGPGTGNLTLKLLERAKKVIAVEVDPRMVLELQRRVQGTQFASHLQIIQGDVMKQDLPF 121
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FDICVANIPYQISSPLTFKLL H+PAFR A+IMFQ EFAMRLVA+PGD L+CRL+VNTQL
Sbjct: 122 FDICVANIPYQISSPLTFKLLAHRPAFRAAVIMFQHEFAMRLVARPGDSLFCRLAVNTQL 181
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
A VSHLLKVG+NNFRPPPKVDSSVVRIEPR P P VN EWDG +R+CF RKNKTL +I
Sbjct: 182 LACVSHLLKVGRNNFRPPPKVDSSVVRIEPRHPPPPVNFREWDGLVRVCFGRKNKTLGAI 241
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE-M 300
FR + L++LE NY+ QAL + +D S D+ +++ + DG +DE
Sbjct: 242 FRQSSTLALLEANYKLHQALAIDKTPGSAGVAQPSDGSSFADTMMEEAGSLGDGDEDEDA 301
Query: 301 DVEDDDGDSDVEGEVSE-FKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
++ D + + SE FK+ V+ +L++ FE++R++K+T +FL LL+ FN++G+HFS
Sbjct: 302 EMAVADQQRTKKNQYSEGFKELVMGILQQMGFEDRRSAKMTLDDFLLLLAKFNESGVHFS 361
>gi|159462946|ref|XP_001689703.1| dimethyladenosine transferase [Chlamydomonas reinhardtii]
gi|158283691|gb|EDP09441.1| dimethyladenosine transferase [Chlamydomonas reinhardtii]
Length = 352
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/354 (57%), Positives = 244/354 (68%), Gaps = 18/354 (5%)
Query: 6 IRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGP 65
+R G QK +G G G+ FHKSKGQHIL+NPL+V++IV KAG+KSTDV+LEIGP
Sbjct: 17 LRVAGGVQKKSQKKGPNTGVSGLEFHKSKGQHILRNPLVVQAIVDKAGVKSTDVVLEIGP 76
Query: 66 GTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC 125
GTGNLT KLLE K VIAVELD RMVLELQRR Q TPY+N L++I GD ++ +LPYFD+C
Sbjct: 77 GTGNLTVKLLEKAKKVIAVELDPRMVLELQRRVQGTPYANNLQIIHGDFMRVELPYFDLC 136
Query: 126 VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARV 185
VANIPY ISSPLTFKLL H+PAFR A+IM+Q EFAMRLVA+ GD LY RL+VNTQL ARV
Sbjct: 137 VANIPYNISSPLTFKLLAHRPAFRAAVIMYQHEFAMRLVAKAGDNLYSRLAVNTQLLARV 196
Query: 186 SHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLK 245
SHLLKVGKNNFRPPPKVDSSVVRIEPR P P VN +EWDG +R+CF RKNKTL +IF+
Sbjct: 197 SHLLKVGKNNFRPPPKVDSSVVRIEPRHPPPPVNFLEWDGLVRLCFSRKNKTLGAIFKQT 256
Query: 246 NVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDD 305
N L LE N+RT Q + + DG
Sbjct: 257 NTLQALETNWRTYQDDAMDGDDD------------------NDDAMTVDGGAGGGGGGGR 298
Query: 306 DGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
G EFK+ V+ VL + + R+SK++Q+EFL LL+LFN AGIHF+
Sbjct: 299 GGRRAGGKVSPEFKELVMKVLEDNGLDTNRSSKMSQEEFLQLLALFNAAGIHFA 352
>gi|307107026|gb|EFN55270.1| hypothetical protein CHLNCDRAFT_23464 [Chlorella variabilis]
Length = 312
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/334 (60%), Positives = 235/334 (70%), Gaps = 46/334 (13%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
GI FHKSKGQHILKNPL+V+SIV KAGIKSTDV+LEIGPGTGNLT KLLE K VIAVE
Sbjct: 25 AGIEFHKSKGQHILKNPLVVQSIVDKAGIKSTDVVLEIGPGTGNLTMKLLERAKKVIAVE 84
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQ 145
LD RMVLEL RR Q TPY N+L++I GDV+K LPYFDICVANIPYQISSPLTFKLL H+
Sbjct: 85 LDPRMVLELTRRVQGTPYQNQLQIIHGDVMKVQLPYFDICVANIPYQISSPLTFKLLAHR 144
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P FR A+IM+Q EFAMRLVA+PGD Y RL+VNTQL ARV+HLLKVG+NNFRPPPKVDSS
Sbjct: 145 PCFRAAVIMYQHEFAMRLVAKPGDPAYSRLAVNTQLLARVNHLLKVGRNNFRPPPKVDSS 204
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
VVRIEPR P P VN +EWDG +R+CF RKNKTL +IFR N L++LE+NY QAL +
Sbjct: 205 VVRIEPRNPAPPVNLLEWDGLVRLCFGRKNKTLGAIFRQGNTLALLEQNYAVAQALHRAA 264
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
D G+ D+ V E V
Sbjct: 265 ---------------------------------------DGGEVDLVAAVVE-------V 278
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
L F E+R++K+TQ +FL LL++FN AGIHF+
Sbjct: 279 LSGSGFLERRSAKMTQDDFLQLLAVFNTAGIHFA 312
>gi|302844675|ref|XP_002953877.1| hypothetical protein VOLCADRAFT_106150 [Volvox carteri f.
nagariensis]
gi|300260689|gb|EFJ44906.1| hypothetical protein VOLCADRAFT_106150 [Volvox carteri f.
nagariensis]
Length = 384
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/385 (56%), Positives = 253/385 (65%), Gaps = 37/385 (9%)
Query: 9 EKGKQKSGPYQGQGL-----------GAGGISFHKSKGQHILKNPLLVESIVQKAGIKST 57
EKGK K G G+ G G+ FHKSKGQHILKNPL+V++IV KAG+KST
Sbjct: 3 EKGKNKDGLRVAGGIQKKTNRKEGNTGVSGLEFHKSKGQHILKNPLVVQAIVDKAGVKST 62
Query: 58 DVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
DV+LEIGPGTGNLT KLLE K VIA+ELD RMVLELQRR Q T Y+N L++I GD ++
Sbjct: 63 DVVLEIGPGTGNLTVKLLEKAKKVIAIELDPRMVLELQRRVQGTAYANNLQIIHGDFMRV 122
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
+LPYFD+CVANIPY ISSPLTFKLL H+PAFR A+IM+Q EFAMRLVA+PGD+LY RL+V
Sbjct: 123 ELPYFDLCVANIPYNISSPLTFKLLAHRPAFRAAVIMYQHEFAMRLVAKPGDQLYSRLAV 182
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKT 237
NTQL ARVSHLLKVGKNNFRPPPKVDSSVVRIEPR P P VN +EWDG +R+CF RKNKT
Sbjct: 183 NTQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRHPPPPVNFLEWDGLVRLCFSRKNKT 242
Query: 238 LSSIFRLKNVLSMLEKNYRTLQ----------------------ALQSSQNSSLGNTEIG 275
L +IFR N L LE NYRT Q G
Sbjct: 243 LGAIFRQTNALQALEANYRTYQALQGAGGGVAGAGGASGGGGGIQSLGGAADDDAMDHDG 302
Query: 276 TDTPSLGDSNGDQSMGVDDG-SDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
D + D +M VD G S + G V E E V+ VL + +
Sbjct: 303 DDEMGDDEMGDDDAMTVDGGPSARGKNGGGRKGGGRVSPEFKEL---VMKVLTDNGLDTN 359
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
R+SK+TQ+EFL LL+LFN+AGIHF+
Sbjct: 360 RSSKMTQEEFLQLLALFNEAGIHFA 384
>gi|303279442|ref|XP_003059014.1| hypothetical protein MICPUCDRAFT_58407 [Micromonas pusilla
CCMP1545]
gi|226460174|gb|EEH57469.1| hypothetical protein MICPUCDRAFT_58407 [Micromonas pusilla
CCMP1545]
Length = 380
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/382 (54%), Positives = 259/382 (67%), Gaps = 31/382 (8%)
Query: 1 MAGG--KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTD 58
+AGG K K+KG Q++ YQG I F KS GQHILKNP++V +IV+K G+KSTD
Sbjct: 7 VAGGIAKHVKKKGAQQAA-YQG-------IQFLKSYGQHILKNPMIVNAIVEKGGVKSTD 58
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
V+LEIGPGTGNLT +LLE K VIA+E D RMV+EL+RR TP+ + LK+I GD LK D
Sbjct: 59 VVLEIGPGTGNLTMRLLETAKKVIAIEFDPRMVVELERRVSGTPHGHNLKIISGDFLKVD 118
Query: 119 LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVN 178
LPYFD+C+AN PYQISSPL FKLL H+P FR A +MFQ+EFAMRL PGD LYCRLSVN
Sbjct: 119 LPYFDVCIANCPYQISSPLVFKLLSHRPMFRSATLMFQREFAMRLCVNPGDPLYCRLSVN 178
Query: 179 TQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
QL AR +H+LKVGKNNFRPPPKVDSSVVRIEPR P VN EWDG +R+CF RKNKTL
Sbjct: 179 AQLLARTTHILKVGKNNFRPPPKVDSSVVRIEPRSPMIDVNFREWDGLVRLCFGRKNKTL 238
Query: 239 SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSN--GDQSMGVDD-- 294
IFR K VL ++E NY+T +ALQ + + ++G+ S G +MG
Sbjct: 239 GGIFRAKTVLQLIENNYKTYKALQVNNGKGVSAMDMGSGGVGNVSSKMLGAATMGARKKG 298
Query: 295 ------------GSDDEMDVEDDDGD----SDVEGEVSEF-KDKVLAVLREGQFEEKRAS 337
G+D++MD++D D D + V+ EF + V VL F + RAS
Sbjct: 299 KFSQKGKKQYGLGADEKMDIDDGDEDGNGITSVDAVTPEFIRGLVEKVLNTDGFVDMRAS 358
Query: 338 KLTQQEFLYLLSLFNKAGIHFS 359
K++Q +FL LL+ FN+AGIHF+
Sbjct: 359 KMSQDDFLRLLATFNEAGIHFA 380
>gi|412993558|emb|CCO14069.1| dimethyladenosine transferase [Bathycoccus prasinos]
Length = 338
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/363 (54%), Positives = 250/363 (68%), Gaps = 38/363 (10%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
+AGG + K+ G K+ GI F KS GQHILKNP +V+SI+QK+G KSTDV
Sbjct: 7 VAGG-VAKKNGGSKAAKDMSTRAAYQGIQFLKSYGQHILKNPAIVDSIIQKSGAKSTDVA 65
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LEIGPGTGNLT KLLE K V+A+E D+RMVLELQRR Q +PY ++L++IQGD +K +LP
Sbjct: 66 LEIGPGTGNLTMKLLETCKKVVAIEYDARMVLELQRRVQGSPYQSKLEIIQGDFMKVELP 125
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFD+CVAN+PYQISSPLTFKLL H+P FR A +MFQ+EFAMR+VA+ GD YCRL+VNTQ
Sbjct: 126 YFDVCVANVPYQISSPLTFKLLSHRPQFRSATLMFQREFAMRMVAKAGDAQYCRLAVNTQ 185
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
L A+ H+LKVGKNNFRPPPKVDSSVVRIEPRKP QVN EWDG +R+CF RKNKTL
Sbjct: 186 LLAKTQHILKVGKNNFRPPPKVDSSVVRIEPRKPPVQVNFREWDGLIRLCFGRKNKTLGG 245
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
IFR K VL +L KNY T +A++ V+ DD M
Sbjct: 246 IFRTKTVLELLTKNYLTFKAVK-----------------------------VNLLDDDAM 276
Query: 301 DVEDDDGDS-----DVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAG 355
++ +++ ++ +V+ V E +K VL + E R+SK+TQ +FL LL++FN+ G
Sbjct: 277 ELAEEEANNKEKRQEVKDHVKELIEK---VLNTNGYVEMRSSKMTQDDFLQLLAVFNEHG 333
Query: 356 IHF 358
IHF
Sbjct: 334 IHF 336
>gi|348528444|ref|XP_003451727.1| PREDICTED: probable dimethyladenosine transferase-like [Oreochromis
niloticus]
Length = 306
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/352 (53%), Positives = 233/352 (66%), Gaps = 48/352 (13%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K K ++KS Q Q + GI F+ GQHILKNPL+V I++KA ++ TDV+LE+GPGT
Sbjct: 3 KVKAEKKS--RQHQEVKNQGIMFNTGIGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGT 60
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GN+T KLLE K V+A ELD R+V ELQ+R Q TP +L+++ GDVLKTDLP+FD+CVA
Sbjct: 61 GNMTVKLLEKAKKVVACELDCRLVAELQKRVQCTPLQAKLQILIGDVLKTDLPFFDVCVA 120
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PYQISSP FKLL H+P FRCA++MFQ+EFAMRLVA+PGDKLYCRLS+NTQL ARV H
Sbjct: 121 NLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDH 180
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
L+KVGKNNFRPPPKV+SSVVRIEP+ P P VN EWDG +RI F+RKNKTL++ F+ V
Sbjct: 181 LMKVGKNNFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAAFKSAAV 240
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
MLEKNYR + SL NTE+ D
Sbjct: 241 EQMLEKNYRI--------HCSLHNTEVPADF----------------------------- 263
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+ +VL+E F EKRA + +F+ LL FN AGIHFS
Sbjct: 264 ---------SISKKIESVLQEADFSEKRARSMDIDDFMVLLHAFNSAGIHFS 306
>gi|308807092|ref|XP_003080857.1| Ribosomal RNA adenine dimethylase (ISS) [Ostreococcus tauri]
gi|116059318|emb|CAL55025.1| Ribosomal RNA adenine dimethylase (ISS) [Ostreococcus tauri]
Length = 344
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/334 (58%), Positives = 232/334 (69%), Gaps = 28/334 (8%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F KS GQHILKNP +V +I+ KAG+KSTDV+LEIGPGTGNLT KLL+A K V+AVE
Sbjct: 38 GIQFLKSFGQHILKNPAIVTAIIDKAGVKSTDVVLEIGPGTGNLTTKLLDACKKVVAVEF 97
Query: 87 DSRMVLELQRRFQSTP-YSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQ 145
D RMVLEL+RR Q P ++++L++IQGD LK DLPYFD+CVAN+PYQISSPL FKLL H+
Sbjct: 98 DPRMVLELRRRVQGDPVWNSKLEIIQGDFLKVDLPYFDVCVANVPYQISSPLIFKLLAHR 157
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P FR A +MFQ+EFAMRLVA PGD LYCRLSVNTQL AR H+LKVGKNNFRPPPKVDSS
Sbjct: 158 PMFRSATLMFQREFAMRLVAPPGDSLYCRLSVNTQLLARTQHILKVGKNNFRPPPKVDSS 217
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
VVR+EPR P+ VN EWDG +R CF RKNKTL IFR KNVL +L NYRT +AL+
Sbjct: 218 VVRLEPRHPQIPVNFKEWDGLVRFCFGRKNKTLGGIFRTKNVLELLTNNYRTYKALKVVP 277
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
+ SM VD +V V + + VLA
Sbjct: 278 DKKAAKAAAAA------------SMDVDVSEASSQEV------------VKQLIEDVLAT 313
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+G F E R+SK++Q +FL LL+ FN GIHF+
Sbjct: 314 --DG-FGEMRSSKMSQDDFLRLLATFNSKGIHFA 344
>gi|255082199|ref|XP_002508318.1| hypothetical protein MICPUN_84159 [Micromonas sp. RCC299]
gi|226523594|gb|ACO69576.1| hypothetical protein MICPUN_84159 [Micromonas sp. RCC299]
Length = 326
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/361 (55%), Positives = 231/361 (63%), Gaps = 51/361 (14%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
+AGG +K +G Q + GGI F KS GQHILKNP++V SIV+K G+KSTDV+
Sbjct: 15 VAGGIAKKHSLASSAG--QKKNATHGGIQFLKSYGQHILKNPMIVNSIVEKGGVKSTDVV 72
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LEIGPGTGNLT +LLE K VIA+E D RMVLELQRR Q TP+ L +I GD LK DLP
Sbjct: 73 LEIGPGTGNLTMRLLETAKKVIAIEFDPRMVLELQRRVQGTPHQQNLTIISGDFLKVDLP 132
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFD+CVAN+PYQISSPL FKLL H+P FR A +MFQ+EFAMRL QPGD LYCRLSVNTQ
Sbjct: 133 YFDVCVANVPYQISSPLVFKLLSHRPMFRAATLMFQREFAMRLCVQPGDPLYCRLSVNTQ 192
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV--NPVEWDGFLRICFIRKNKTL 238
L AR +HLLKVGKNNFRPPPKVDSSVVRIEPR P + N EWDG +R+CF RKNKTL
Sbjct: 193 LLARTTHLLKVGKNNFRPPPKVDSSVVRIEPR-PISTIPCNFKEWDGLVRLCFGRKNKTL 251
Query: 239 SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDD 298
IFR K VL +LE NY+T +ALQ
Sbjct: 252 GGIFRTKTVLELLETNYKTYKALQ------------------------------------ 275
Query: 299 EMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ D V V E VL E RASK++Q +FL LL+ FN+ GIHF
Sbjct: 276 ---LHDPSTPEGVRKLVEE-------VLATNGHENMRASKMSQDDFLVLLATFNEKGIHF 325
Query: 359 S 359
+
Sbjct: 326 A 326
>gi|410923243|ref|XP_003975091.1| PREDICTED: probable dimethyladenosine transferase-like [Takifugu
rubripes]
Length = 306
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/352 (53%), Positives = 231/352 (65%), Gaps = 48/352 (13%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K K ++KS Q Q + GI F+ GQHILKNPL+V SI++KA ++ TDV+LE+GPGT
Sbjct: 3 KVKAEKKS--RQHQEVKNQGIMFNTGIGQHILKNPLIVNSIIEKAALRPTDVVLEVGPGT 60
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GN+T KLLE K V+A ELD R+V ELQ+R Q TP N+L+++ GDVLKTDLP+FDICVA
Sbjct: 61 GNMTVKLLEKAKKVVACELDCRLVAELQKRVQCTPMQNKLQILVGDVLKTDLPFFDICVA 120
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PYQISSP FKLL H+P FRCA++MFQ+EFAMRLVA PGDKLYCRLS+NTQL ARV H
Sbjct: 121 NLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAMRLVAPPGDKLYCRLSINTQLLARVDH 180
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
L+KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTL + F+ V
Sbjct: 181 LMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLGAAFKSTAV 240
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
+LEKNYR + SL N E+ D
Sbjct: 241 EQLLEKNYRI--------HCSLHNVEVPADF----------------------------- 263
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+ VL+E F EKRA + +F+ LL FN AGIHFS
Sbjct: 264 ---------SISKKIEGVLQEASFSEKRARSMDIDDFMVLLHAFNSAGIHFS 306
>gi|115757168|ref|XP_779962.2| PREDICTED: probable dimethyladenosine transferase-like
[Strongylocentrotus purpuratus]
Length = 292
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/335 (55%), Positives = 233/335 (69%), Gaps = 46/335 (13%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
A GI F+ GQHILKNPL++ESI+ KA ++STD +LE+GPGTGN+T K+L+ K V+A
Sbjct: 4 ALGILFNTGIGQHILKNPLVIESIISKAALRSTDTVLEVGPGTGNMTVKMLDKAKKVVAC 63
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
ELD R+V ELQ+R Q TP++ +L+VI GDVLKTDLP+FD+CVAN+PYQISSP FKLL H
Sbjct: 64 ELDPRLVAELQKRVQGTPFAPKLQVIVGDVLKTDLPFFDVCVANLPYQISSPFVFKLLLH 123
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNF+PPPKV+S
Sbjct: 124 RPFFRCAVLMFQQEFAQRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFKPPPKVES 183
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
SVVRIEPR P P +N EWDG +RI F+RKNKTLS+ FR K V+ MLEKNYR
Sbjct: 184 SVVRIEPRNPPPPINFQEWDGLVRIAFVRKNKTLSAAFRNKGVVEMLEKNYRV------- 236
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
+ S+ N I D +D+ K+KV++
Sbjct: 237 -HCSVKNIAI----------------------PDNLDM----------------KEKVVS 257
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VL + +FE KRA + +FL LLS FN GIHFS
Sbjct: 258 VLEKIEFEGKRARTMDIDDFLKLLSSFNTEGIHFS 292
>gi|145349952|ref|XP_001419390.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579621|gb|ABO97683.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 320
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/334 (58%), Positives = 224/334 (67%), Gaps = 52/334 (15%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F KS GQHILKNP +V +IV KAG+KSTDV+LEIGPGTGNLT KLL+A K VIAVE
Sbjct: 38 GIQFLKSFGQHILKNPAIVNAIVDKAGVKSTDVVLEIGPGTGNLTTKLLDACKKVIAVEF 97
Query: 87 DSRMVLELQRRFQSTPYSN-RLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQ 145
D RMVLEL+RR QS P N RL++IQGD LK DLPYFD+CVAN+PYQISSPL FKLL H+
Sbjct: 98 DPRMVLELRRRVQSDPAQNSRLEIIQGDFLKVDLPYFDVCVANVPYQISSPLIFKLLAHR 157
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P FR A +MFQ+EFAMRLVA PGD LYCRLSVNTQL AR H+LKVGKNNFRPPPKVDSS
Sbjct: 158 PMFRSATLMFQREFAMRLVAPPGDALYCRLSVNTQLLARTQHILKVGKNNFRPPPKVDSS 217
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
VVRIEPR P+ VN EWDG +R CF RKNKTL IFR KNVL +L N+RT +ALQ
Sbjct: 218 VVRIEPRHPQIPVNFKEWDGLVRFCFGRKNKTLGGIFRTKNVLELLTNNFRTYKALQVV- 276
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
D + +ED V
Sbjct: 277 ------------------------------PDKKQLIED--------------------V 286
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
L F E R+SK++Q +FL LL++FN GIHF+
Sbjct: 287 LATDGFGEMRSSKMSQDDFLRLLAVFNSKGIHFA 320
>gi|259089147|ref|NP_001158611.1| Probable dimethyladenosine transferase [Oncorhynchus mykiss]
gi|225705252|gb|ACO08472.1| Probable dimethyladenosine transferase [Oncorhynchus mykiss]
Length = 306
Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 185/355 (52%), Positives = 234/355 (65%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+R E+ + Q Q + G+ F+ GQHILKNPL+V I++KA ++ TDV+LE+G
Sbjct: 3 KVRAERKTR-----QHQQVKNRGVMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T KLLE K V+A ELD R+V ELQ+R Q TP +L+++ GDVLKT+LP+FD+
Sbjct: 58 PGTGNMTVKLLEKAKKVVACELDGRLVAELQKRVQCTPMQTKLQILVGDVLKTELPFFDV 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFAMRLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V HL+KVGKNNFRPPPKV+SSVVRIEP+ P P VN EWDG +RI F+RKNKTL++ F+
Sbjct: 178 VDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFKS 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
V +LEKNYR + S+ N EI D
Sbjct: 238 TAVEQLLEKNYRI--------HCSVHNVEIPAD--------------------------- 262
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
S K+ +VL+E +F EKRA + +F+ LL FN AGIHFS
Sbjct: 263 -----------SSITKKIESVLQEAEFSEKRARIMDIDDFMVLLHAFNSAGIHFS 306
>gi|340500433|gb|EGR27310.1| hypothetical protein IMG5_198180 [Ichthyophthirius multifiliis]
Length = 354
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/356 (49%), Positives = 252/356 (70%), Gaps = 20/356 (5%)
Query: 19 QGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG 78
+G + + F+KS GQHIL NP ++ SIV+K+ I+ TD++LEIGPGTGNLT LLE
Sbjct: 2 KGNPVSKNSMVFNKSFGQHILVNPQILHSIVEKSAIRPTDIVLEIGPGTGNLTSLLLEKA 61
Query: 79 KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLT 138
K VIA+E+D RM+ EL +RF+ + ++++ ++IQGD + ++ P+FD+CVAN PYQISSPL
Sbjct: 62 KKVIAIEIDPRMIAELNKRFKYSQHASKFELIQGDAISSEFPFFDVCVANTPYQISSPLV 121
Query: 139 FKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
FKLL H+P FR AI+MFQKEFAMR VA+PG +LYCRLSVN QL +R HL+KVGKNNF+P
Sbjct: 122 FKLLSHRPIFRHAILMFQKEFAMRCVAKPGSELYCRLSVNVQLLSRCDHLIKVGKNNFKP 181
Query: 199 PPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTL 258
PPKV+SSV+RI+P+ P PQ+N +EWDG LRICF+RKNK LS++F++K++ S+LEKNY
Sbjct: 182 PPKVESSVIRIQPKNPAPQINYLEWDGLLRICFMRKNKQLSALFKIKSISSLLEKNYEVF 241
Query: 259 QALQSSQNSSLGNTEIGTDTPSLGD----------------SNGDQSMGVDDGSDDEMDV 302
Q L+++QN GN + + D +++ +D ++E D+
Sbjct: 242 QKLKAAQNE--GNIQFEEQKTNTNDLLNLVMDEEFEEDEQQQKKNKNKNKNDDQEEENDM 299
Query: 303 EDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
++++ +++ ++ FK+K+ +L + +F EKR SKL +FL LL LFN+ IHF
Sbjct: 300 QEENNENNDTKQL--FKEKISKILIDNKFNEKRPSKLDIDDFLKLLYLFNQNDIHF 353
>gi|167533147|ref|XP_001748254.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773374|gb|EDQ87015.1| predicted protein [Monosiga brevicollis MX1]
Length = 345
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 185/332 (55%), Positives = 225/332 (67%), Gaps = 21/332 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+K GQHILKNPL+V+ I+ KA IKSTD +LEIGPGTGNLT KLLE GK V+A E+
Sbjct: 34 GIVFNKDFGQHILKNPLVVQGIIDKAAIKSTDTVLEIGPGTGNLTVKLLEKGKKVVACEV 93
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D R+ ELQ+R TP +L ++ GDVLK DLP+FD+CVAN+PYQISSP FK+L H+P
Sbjct: 94 DPRLAAELQKRVMGTPLHRKLHLVMGDVLKADLPFFDVCVANMPYQISSPFVFKILLHRP 153
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQ+EFA RLVA+PGD LYCRLSVNTQL ARV H++KVG+NNFRPPPKV+SSV
Sbjct: 154 LFRCAVLMFQREFAQRLVAKPGDALYCRLSVNTQLLARVDHVMKVGRNNFRPPPKVESSV 213
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEPR P P V+ EWDG LRI FIRKNKTL++ F K+VL +LE NYR A
Sbjct: 214 VRIEPRNPPPPVDFEEWDGLLRIAFIRKNKTLAACFHSKSVLKLLESNYRIFCAAAQPPR 273
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
+ G ++ + SLG M D+ D+ KD + AVL
Sbjct: 274 RAQGCSKGCSLVYSLG-----LPMHKQQEVPDKFDI----------------KDHIDAVL 312
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
F EKRA +L +FL LLS N A +HF
Sbjct: 313 TTTGFGEKRAKQLDVDDFLSLLSAMNDADVHF 344
>gi|432874396|ref|XP_004072476.1| PREDICTED: probable dimethyladenosine transferase-like [Oryzias
latipes]
Length = 306
Score = 363 bits (933), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 186/352 (52%), Positives = 236/352 (67%), Gaps = 48/352 (13%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K K ++KS Q Q + GI F+ GQHILKNPL+V I++KA ++ TDV+LE+GPGT
Sbjct: 3 KVKAEKKS--RQHQEIKNQGIVFNTGIGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGT 60
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GN+T KLLE K V+A ELD+R+V ELQ+R Q TP +L+++ GDVLKTDLP+FD+CVA
Sbjct: 61 GNMTVKLLEKAKKVVACELDTRLVAELQKRVQCTPMQAKLQILIGDVLKTDLPFFDVCVA 120
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PYQISSP FKLL H+P FRCA++MFQ+EFAMRLVA+PGDKLYCRLS+NTQL A+V H
Sbjct: 121 NLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLAQVDH 180
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
L+KVGKNNFRPPPKV+SSVVRIEP+ P P VN EWDG +RI F+RKNKTL++ F+ V
Sbjct: 181 LMKVGKNNFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAAFKSTAV 240
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
+LEKNYR ++ S D P
Sbjct: 241 EQLLEKNYRIHCSVHS------------VDVP---------------------------- 260
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
V+ +S+ K+ +VL+E F EKRA + +F+ LL FN AGIHFS
Sbjct: 261 ---VDFSISK---KIESVLQEAGFSEKRARSMDIDDFMVLLHAFNSAGIHFS 306
>gi|57525891|ref|NP_001003556.1| probable dimethyladenosine transferase [Danio rerio]
gi|50417873|gb|AAH78286.1| Zgc:101122 [Danio rerio]
Length = 306
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 183/352 (51%), Positives = 234/352 (66%), Gaps = 48/352 (13%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K K ++KS +Q + + GI F+ GQHILKNPL+V I++KA ++ TDV+LE+GPGT
Sbjct: 3 KVKAEKKSRTHQE--VKSQGIMFNTGIGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGT 60
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GN+T KLLE K V+A ELD+R+V ELQ+R Q TP N+L+++ GDVLKT+LP+FD+CVA
Sbjct: 61 GNMTVKLLEKAKKVVACELDARLVAELQKRVQCTPMQNKLQILIGDVLKTELPFFDVCVA 120
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PYQISSP FKLL H+P FRCA++MFQ+EFAMRLVA+PGDKLYCRLS+NTQL ARV H
Sbjct: 121 NLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDH 180
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
L KVGKNNFRPPPKV+SSVVRIEP+ P P VN EWDG +RI F+RKNK LS+ F+ V
Sbjct: 181 LTKVGKNNFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKMLSAAFKSAAV 240
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
+LEKNY+ + S+ N EI D
Sbjct: 241 EKLLEKNYKI--------HCSVHNIEIPEDF----------------------------- 263
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+ ++L+E +F +KRA + +F+ LL FN AGIHFS
Sbjct: 264 ---------NIAPKIESILQESKFSDKRARSMDIDDFMVLLHAFNSAGIHFS 306
>gi|156393635|ref|XP_001636433.1| predicted protein [Nematostella vectensis]
gi|156223536|gb|EDO44370.1| predicted protein [Nematostella vectensis]
Length = 308
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 186/353 (52%), Positives = 234/353 (66%), Gaps = 52/353 (14%)
Query: 7 RKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPG 66
+K + +S PY+ G+ F GQHILKNPL++ S+V KAG++STD +LEIGPG
Sbjct: 8 KKYRQHSQSEPYKQ------GLRFQTEHGQHILKNPLVITSLVDKAGLRSTDTVLEIGPG 61
Query: 67 TGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICV 126
TGNLT KLLE K VIA ELD RMV ELQ+R Q TP ++L V+ GDVLKTDLP+FD+CV
Sbjct: 62 TGNLTVKLLEQSKKVIACELDPRMVAELQKRVQGTPLQSKLSVMVGDVLKTDLPFFDVCV 121
Query: 127 ANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVS 186
AN+PYQISSP FKLL H+P FRCA++MFQ+EFA RL+A+PGDKLYCRLS+NTQL ARV
Sbjct: 122 ANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAQRLIAKPGDKLYCRLSINTQLLARVD 181
Query: 187 HLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN 246
H++KVGKNNFRPPPKV+SSVVRIEP+ P P VN EWDG +RI F+RKNKTLS+ F +
Sbjct: 182 HIMKVGKNNFRPPPKVESSVVRIEPKNPPPPVNFKEWDGLVRIAFVRKNKTLSACFNSRP 241
Query: 247 VLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDD 306
VL +LEKNY+ +L G+ SD +M
Sbjct: 242 VLEVLEKNYKIHCSLN----------------------------GIMVDSDFDM------ 267
Query: 307 GDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+K+ +L E + ++KRA + +FL LL+LFN GIHF+
Sbjct: 268 ------------KEKIQQILSESENDKKRARTMDIDDFLALLTLFNSNGIHFA 308
>gi|225704090|gb|ACO07891.1| Probable dimethyladenosine transferase [Oncorhynchus mykiss]
Length = 306
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/355 (51%), Positives = 232/355 (65%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+R E+ + Q Q + G+ F+ GQHILKNPL+V I++KA ++ TDV+LE+G
Sbjct: 3 KVRAERKTR-----QHQQVKNQGVMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T KLLE K V+A ELD R+V ELQ+R Q TP +L+++ GDVLKT+LP+FD+
Sbjct: 58 PGTGNMTVKLLEKAKKVVACELDGRLVAELQKRVQCTPMQTKLQILVGDVLKTELPFFDV 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CV N+PYQISSP FKLL H+P FRCA++MFQ+EFAMRLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CVTNLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V HL+KVGKNNFRPPPKV+SSVVRIEP+ P P VN EWDG +RI F+RKNKTL++ F+
Sbjct: 178 VDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFKS 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
V +LEKNYR + S+ N EI D
Sbjct: 238 TAVEQLLEKNYRI--------HCSVHNVEIPADF-------------------------- 263
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+ +VL+E +F EKRA + +F+ LL FN AGIHFS
Sbjct: 264 ------------SITKKIESVLQEAEFSEKRARIMDIDDFMVLLHAFNSAGIHFS 306
>gi|225717294|gb|ACO14493.1| Probable dimethyladenosine transferase [Esox lucius]
Length = 306
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/355 (51%), Positives = 233/355 (65%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+R EK + Q Q + G+ F+ GQHILKNPL+V I++KA ++ TDV+LE+G
Sbjct: 3 KVRAEKKTR-----QHQEVKNQGVMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T KLLE K V+A LD R+V ELQ+R Q TP +L+++ GDVLKT+LP+FD+
Sbjct: 58 PGTGNMTVKLLEKAKKVVACGLDGRLVAELQKRVQCTPMQAKLQILVGDVLKTELPFFDV 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFAMRLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V HL+KVGKNNFRPPPKV+SSVVRIEP+ P P VN EWDG +RI F+RKNKTL++ F+
Sbjct: 178 VDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFKS 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
V +LEKNYR + S+ N EI +D
Sbjct: 238 TAVEQLLEKNYRI--------HCSVHNVEIPSDF-------------------------- 263
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+ +VL+E +F EKRA + +F+ LL FN AGIHFS
Sbjct: 264 ------------SITKKIESVLQEAEFSEKRARSMDIDDFMVLLHAFNSAGIHFS 306
>gi|213511764|ref|NP_001135031.1| Probable dimethyladenosine transferase [Salmo salar]
gi|209738164|gb|ACI69951.1| Probable dimethyladenosine transferase [Salmo salar]
Length = 306
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/350 (51%), Positives = 231/350 (66%), Gaps = 46/350 (13%)
Query: 10 KGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGN 69
K + ++ Q Q + G+ F+ GQHILKNPL+V I++KA ++ TDV+LE+GPGTGN
Sbjct: 3 KVRTETRTRQHQQVKNQGVMFNTGLGQHILKNPLVVNGIIEKAALRPTDVVLEVGPGTGN 62
Query: 70 LTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANI 129
+T KLLE K V+A ELD R+V ELQ+R Q TP +L+++ GDVLKT+LP+FD+CVAN+
Sbjct: 63 MTVKLLEKAKKVVACELDGRLVAELQKRVQCTPMQTKLQILVGDVLKTELPFFDVCVANL 122
Query: 130 PYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLL 189
PYQISSP FKLL H+P FRCA++MFQ+EFAMRLVA+PGDKLYCRLS+NTQL ARV HL+
Sbjct: 123 PYQISSPFVFKLLLHRPFFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLARVDHLM 182
Query: 190 KVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
KVGKNNFRPPPKV+SSVVRIEP+ P P VN EWDG +RI F+RKNKTL++ F+ V
Sbjct: 183 KVGKNNFRPPPKVESSVVRIEPKNPPPPVNFQEWDGLVRIAFVRKNKTLNAGFKSTAVER 242
Query: 250 MLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDS 309
+LEKNYR + S+ + EI D
Sbjct: 243 LLEKNYRI--------HCSVHSVEIPADF------------------------------- 263
Query: 310 DVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+ +VL+E +F EKRA + +F+ LL FN AGIHFS
Sbjct: 264 -------SITKKIESVLQEAEFSEKRARSMDIDDFMVLLHAFNSAGIHFS 306
>gi|427787757|gb|JAA59330.1| Putative ribosomal rna adenine dimethylase [Rhipicephalus
pulchellus]
Length = 305
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 229/343 (66%), Gaps = 50/343 (14%)
Query: 19 QGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG 78
Q + + I+F GQHILKNPL++ +++K+ I+ TDV+LE+GPGTGN+T KLLE
Sbjct: 11 QHEVVQRQNIAFRTELGQHILKNPLVINGMIEKSAIRPTDVVLEVGPGTGNMTVKLLEKA 70
Query: 79 KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLT 138
K VIA E+D+R+V ELQ+R Q T ++L +I GDVLK++LP+FDICVAN+PYQISSP
Sbjct: 71 KKVIACEVDTRLVAELQKRVQGTHLHSKLHIIVGDVLKSELPFFDICVANLPYQISSPFV 130
Query: 139 FKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
FKLL H+P FRCA +MFQ+EFA RLVA+PGDKLYCRLSVNTQL ARV L+KVGKNNFRP
Sbjct: 131 FKLLLHRPFFRCATLMFQREFAQRLVAKPGDKLYCRLSVNTQLLARVDILMKVGKNNFRP 190
Query: 199 PPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTL 258
PPKV+SSVVR+EPR P P +N +EWDG LRICF+RKNKTLS+ F+ VL+MLEKNYR
Sbjct: 191 PPKVESSVVRLEPRNPPPAINFIEWDGLLRICFVRKNKTLSAAFKQTAVLAMLEKNYRV- 249
Query: 259 QALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEF 318
+ S+ N E+ SEF
Sbjct: 250 -------HCSVANEELP----------------------------------------SEF 262
Query: 319 --KDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+KV +L +G + +KRA + +F+ LL LFN GIHFS
Sbjct: 263 NMKEKVDEILSQGGYSDKRARTMDTDDFMALLHLFNTNGIHFS 305
>gi|383854640|ref|XP_003702828.1| PREDICTED: probable dimethyladenosine transferase-like [Megachile
rotundata]
Length = 306
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/355 (51%), Positives = 235/355 (66%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
KIR EK + QG I F+ + GQHILKNPL+++S+V+KA ++ TDV+LEIG
Sbjct: 3 KIRNEKKSRIHKEVAKQG-----ILFNTNIGQHILKNPLVIQSMVEKAALRPTDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T KLL+ K VIA E+D+RMV ELQ+R Q TPY +L+++ GDVLKTDLP+FD+
Sbjct: 58 PGTGNMTVKLLDKAKKVIACEVDTRMVAELQKRVQGTPYQPKLQIMIGDVLKTDLPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVANIPYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CVANIPYQISSPLVFKLLLHRPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNFRPPPKV+S+VVRIEPR P P VN EWDG RI F+RKNKTLS++F+
Sbjct: 178 VDLLMKVGKNNFRPPPKVESNVVRIEPRNPPPPVNYQEWDGLTRIAFVRKNKTLSAVFKQ 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
VL+MLEKNY+ L S N+ + +G D
Sbjct: 238 TTVLTMLEKNYK----LHCSLNNK----------------------AIPEGFD------- 264
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+ + +L++ E KRA + +F+ +L FN G+HF+
Sbjct: 265 -------------IKELISKILQKADAENKRARTMDIDDFISILHAFNTEGVHFT 306
>gi|126315217|ref|XP_001366147.1| PREDICTED: probable dimethyladenosine transferase-like [Monodelphis
domestica]
Length = 309
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/353 (52%), Positives = 230/353 (65%), Gaps = 55/353 (15%)
Query: 7 RKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPG 66
R+E+ +QKS AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPG
Sbjct: 12 RRERLEQKS---------AGGVMFNTGLGQHILKNPLIVNSIIDKAALRPTDVVLEVGPG 62
Query: 67 TGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICV 126
TGN+T KLLE K V+A ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CV
Sbjct: 63 TGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPQASKLQVMVGDVLKTDLPFFDACV 122
Query: 127 ANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVS 186
AN+PYQISSP FKLL H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV
Sbjct: 123 ANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVD 182
Query: 187 HLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN 246
HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+
Sbjct: 183 HLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSA 242
Query: 247 VLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDD 306
V +LEKNYR + S+ N I D
Sbjct: 243 VQQLLEKNYRI--------HCSVHNIAIPEDF---------------------------- 266
Query: 307 GDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DK+ +L + F +KRA + +F+ LL FN GIHFS
Sbjct: 267 ----------SIADKIQKILMDTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 309
>gi|291395424|ref|XP_002714103.1| PREDICTED: dimethyladenosine transferase [Oryctolagus cuniculus]
Length = 308
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/358 (51%), Positives = 233/358 (65%), Gaps = 55/358 (15%)
Query: 2 AGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
+G K R+E+ + KS AGG+ F+K GQHILKNPL+V SI++KA ++ TDV+L
Sbjct: 6 SGAKRREERRELKS---------AGGLVFNKGIGQHILKNPLVVNSIIEKAALRPTDVVL 56
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
E+GPGTGN+T KLLE K VIA ELD R+V EL +R Q TP +++L+V+ GDVLKT+LP+
Sbjct: 57 EVGPGTGNMTVKLLEKAKKVIACELDPRLVAELHKRVQGTPLASKLQVMVGDVLKTELPF 116
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FD CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL
Sbjct: 117 FDTCVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQL 176
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+
Sbjct: 177 LARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAA 236
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMD 301
F+ V +LEKNYR + S+ N I D
Sbjct: 237 FKSSAVQQLLEKNYRI--------HCSVHNIIIPEDF----------------------- 265
Query: 302 VEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DK+ +L F +KRA + +F+ LL FN GIHFS
Sbjct: 266 ---------------SIADKIQQILTSTGFSDKRARTMDIDDFIRLLHGFNAEGIHFS 308
>gi|417398802|gb|JAA46434.1| Putative ribosomal rna adenine dimethylase [Desmodus rotundus]
Length = 313
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/335 (54%), Positives = 222/335 (66%), Gaps = 46/335 (13%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA
Sbjct: 25 AGGLRFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIAC 84
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H
Sbjct: 85 ELDPRLVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLH 144
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+S
Sbjct: 145 RPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVES 204
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
SVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 205 SVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------- 257
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
+ S+ NT I D DK+
Sbjct: 258 -HCSVHNTIIPEDF--------------------------------------SIADKIQQ 278
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 279 ILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|21358017|ref|NP_651660.1| CG11837 [Drosophila melanogaster]
gi|195574637|ref|XP_002105291.1| GD21406 [Drosophila simulans]
gi|27151493|sp|Q9VAQ5.1|DIM1_DROME RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|7301735|gb|AAF56847.1| CG11837 [Drosophila melanogaster]
gi|16769516|gb|AAL28977.1| LD35950p [Drosophila melanogaster]
gi|194201218|gb|EDX14794.1| GD21406 [Drosophila simulans]
gi|220944428|gb|ACL84757.1| CG11837-PA [synthetic construct]
gi|220954304|gb|ACL89695.1| CG11837-PA [synthetic construct]
Length = 306
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 177/355 (49%), Positives = 237/355 (66%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+ KEK + Q QG I F+K GQHILKNPL++ ++++KA +++TDV+LEIG
Sbjct: 3 KVTKEKKSRIHNDVQKQG-----IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T ++LE K VIA E+D+R+ ELQ+R Q+TP +L+V+ GD LK +LP+FD+
Sbjct: 58 PGTGNMTVRMLERAKKVIACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+AN+PYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CIANVPYQISSPLIFKLLLHRPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNFRPPPKV+SSVVR+EP+ P P VN EWDG RI F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFRPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+VL MLEKNY+ ++L++ +ED
Sbjct: 238 TSVLEMLEKNYKLYRSLRNE------------------------------------PIED 261
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
D + +DKV+++L E KRA + +F+ LL FN AGIHF+
Sbjct: 262 D----------FKMQDKVISILEEQDMAAKRARSMDIDDFMRLLLAFNSAGIHFN 306
>gi|395818753|ref|XP_003782781.1| PREDICTED: probable dimethyladenosine transferase [Otolemur
garnettii]
Length = 313
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 222/335 (66%), Gaps = 46/335 (13%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 25 AGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVAC 84
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H
Sbjct: 85 ELDPRLVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLH 144
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+S
Sbjct: 145 RPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVES 204
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
SVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 205 SVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------- 257
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
+ S+ NT I D DK+
Sbjct: 258 -HCSIHNTVIPEDF--------------------------------------SIADKIQQ 278
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 279 ILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|346716185|ref|NP_001231242.1| probable dimethyladenosine transferase [Sus scrofa]
Length = 313
Score = 357 bits (916), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/336 (53%), Positives = 221/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP ++RL+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPLASRLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|149059278|gb|EDM10285.1| similar to RIKEN cDNA 1500031M22 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 313
Score = 357 bits (916), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 183/358 (51%), Positives = 232/358 (64%), Gaps = 51/358 (14%)
Query: 2 AGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
A R+++ +Q+ G+ AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+L
Sbjct: 7 AASSRRRDRQEQR-----GELKRAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVL 61
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
E+GPGTGN+T KLLE K V+A ELD R+V EL +R Q TP +++L+V+ GDVLK+DLP+
Sbjct: 62 EVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPF 121
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FD CVAN+PYQISSP FKLL H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL
Sbjct: 122 FDACVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQL 181
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+
Sbjct: 182 LARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAA 241
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMD 301
F+ V +LEKNYR + S+ NT I D
Sbjct: 242 FKSSAVQQLLEKNYRI--------HCSVQNTVIPEDF----------------------- 270
Query: 302 VEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DK+ +L F +KRA + +F+ LL FN GIHFS
Sbjct: 271 ---------------SIADKIQQILTNTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|195341093|ref|XP_002037146.1| GM12757 [Drosophila sechellia]
gi|194131262|gb|EDW53305.1| GM12757 [Drosophila sechellia]
Length = 306
Score = 357 bits (915), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 177/355 (49%), Positives = 236/355 (66%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+ KEK + Q QG I F+K GQHILKNPL++ ++++KA +++TDV+LEIG
Sbjct: 3 KVTKEKKSRIHNDVQKQG-----IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T ++LE K VIA E+D+R+ ELQ+R Q+TP +L V+ GD LK +LP+FD+
Sbjct: 58 PGTGNMTVRMLERAKKVIACEIDTRLAAELQKRVQATPLQPKLHVLIGDFLKAELPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+AN+PYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CIANVPYQISSPLIFKLLLHRPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNFRPPPKV+SSVVR+EP+ P P VN EWDG RI F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFRPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+VL MLEKNY+ ++L++ +ED
Sbjct: 238 TSVLEMLEKNYKLYRSLRNE------------------------------------PIED 261
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
D + +DKV+++L E KRA + +F+ LL FN AGIHF+
Sbjct: 262 D----------FKMQDKVISILEEQDMAAKRARSMDIDDFMRLLLAFNSAGIHFN 306
>gi|340724499|ref|XP_003400619.1| PREDICTED: probable dimethyladenosine transferase-like [Bombus
terrestris]
Length = 306
Score = 357 bits (915), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 179/333 (53%), Positives = 226/333 (67%), Gaps = 46/333 (13%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+ + GQHILKNPL+++S+V+KA ++ TDV+LEIGPGTGN+T KLL+ K VIA EL
Sbjct: 20 GILFNTNIGQHILKNPLVIQSMVEKAAVRPTDVVLEIGPGTGNMTVKLLDKAKKVIACEL 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D+RMV ELQ+R Q T Y ++L+++ GDVLKTDLP+FD+CVANIPYQISSPL FKLL H+P
Sbjct: 80 DARMVAELQKRVQGTIYQSKLQIMIGDVLKTDLPFFDLCVANIPYQISSPLVFKLLLHRP 139
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL ARV L+KVGKNNFRPPPKV+S+V
Sbjct: 140 LFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDLLMKVGKNNFRPPPKVESNV 199
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEPR P P +N EWDG RI F+RKNKTLS+ F+ VL+MLEKNY+ +
Sbjct: 200 VRIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQTTVLTMLEKNYKL--------H 251
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
SL N EI E K+ + +L
Sbjct: 252 CSLNNKEI--------------------------------------PEGFNIKEMINDIL 273
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
++ E KRA + +F+ LL FN G+HF+
Sbjct: 274 QKADAENKRARTMDIDDFISLLHAFNAQGVHFT 306
>gi|21313560|ref|NP_079723.1| probable dimethyladenosine transferase [Mus musculus]
gi|27151491|sp|Q9D0D4.1|DIM1_MOUSE RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=DIM1 dimethyladenosine transferase 1 homolog;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName: Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|12847736|dbj|BAB27687.1| unnamed protein product [Mus musculus]
gi|18043925|gb|AAH19799.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Mus
musculus]
gi|74148362|dbj|BAE36330.1| unnamed protein product [Mus musculus]
gi|148686528|gb|EDL18475.1| RIKEN cDNA 1500031M22, isoform CRA_b [Mus musculus]
Length = 313
Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 222/335 (66%), Gaps = 46/335 (13%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 25 AGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVAC 84
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
ELD R+V EL +R Q TP +++L+V+ GDVLK+DLP+FD CVAN+PYQISSP FKLL H
Sbjct: 85 ELDPRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLH 144
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+S
Sbjct: 145 RPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVES 204
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
SVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 205 SVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------- 257
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
+ S+ NT I D DK+
Sbjct: 258 -HCSVQNTVIPEDF--------------------------------------SIADKIQQ 278
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 279 ILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|357625687|gb|EHJ76049.1| dimethyladenosine transferase [Danaus plexippus]
Length = 306
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/337 (52%), Positives = 225/337 (66%), Gaps = 46/337 (13%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
+ GI F+K GQHILKNPL++ S++ KAG++ TDV LEIGPGTGN+T K+L+ K VI
Sbjct: 16 IAKQGIQFNKDFGQHILKNPLIITSMLDKAGLRPTDVALEIGPGTGNMTIKMLDRVKKVI 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
A E+D+R+V ELQ+R Q TPY +L+++ GDVLKT+LP+FDICVANIPYQISSPL FKLL
Sbjct: 76 ACEIDTRLVAELQKRVQGTPYQAKLQILVGDVLKTELPFFDICVANIPYQISSPLVFKLL 135
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL ARV L+KVGKNNFRPPPKV
Sbjct: 136 LHRPFFRCAVLMFQQEFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKV 195
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQ 262
+SSVVRIEPR P P +N VEWDG RI F+RKNKTLS+ F+ L++LEKNY+
Sbjct: 196 ESSVVRIEPRNPPPPINFVEWDGLTRIAFVRKNKTLSASFKQSTTLAVLEKNYKV----- 250
Query: 263 SSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKV 322
+ SL N EI D + K K+
Sbjct: 251 ---HCSLHNKEIPEDF--------------------------------------DIKQKI 269
Query: 323 LAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L + ++ RA + +F+ LL FN GIHF+
Sbjct: 270 QDILTTAEADQMRARTMDVDDFMKLLHAFNSEGIHFA 306
>gi|47226710|emb|CAG07869.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/360 (51%), Positives = 229/360 (63%), Gaps = 56/360 (15%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+R EK + Q Q + GI F+ GQHILKNPL+V S+++KA ++ TDV+LE+G
Sbjct: 3 KVRAEKKTR-----QHQEVKNQGIMFNTGIGQHILKNPLIVNSVIEKAALRPTDVVLEVG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T KLLE K V+A ELD R+V ELQ+R Q TP N+L+++ GDVLKTDLP+FD+
Sbjct: 58 PGTGNMTVKLLEKAKKVVACELDCRLVAELQKRVQCTPMQNKLQILVGDVLKTDLPFFDV 117
Query: 125 CVANIPYQISSPL-----TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
CVAN+PYQ+ + L FKLL H+P FRCA++MFQ+EF MRLVA PGDKLYCRLS+NT
Sbjct: 118 CVANLPYQVDTFLFRRRIVFKLLLHRPFFRCAVLMFQREFPMRLVAPPGDKLYCRLSINT 177
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS
Sbjct: 178 QLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLS 237
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
+ F+ V +LEKNYR + SL N I D
Sbjct: 238 AAFKSSAVEQLLEKNYRI--------HCSLHNVTIPADF--------------------- 268
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+ VL+E F EKRA + +F+ LL FN AGIHFS
Sbjct: 269 -----------------SIAKKIEGVLQEASFCEKRARSMDIDDFMVLLHAFNSAGIHFS 311
>gi|296194498|ref|XP_002806669.1| PREDICTED: LOW QUALITY PROTEIN: probable dimethyladenosine
transferase-like [Callithrix jacchus]
Length = 313
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/357 (50%), Positives = 230/357 (64%), Gaps = 49/357 (13%)
Query: 3 GGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
G + + +G+Q+ + AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE
Sbjct: 6 SGAVVRRRGRQEQ---HREVKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLE 62
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPGTGN+T KLLE K V+A ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+F
Sbjct: 63 VGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFF 122
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D CVAN+PYQISSP FKLL H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL
Sbjct: 123 DACVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLL 182
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F
Sbjct: 183 ARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAF 242
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDV 302
+ V +LEKNYR + S+ N I D
Sbjct: 243 KSSAVQQLLEKNYRI--------HCSVHNIIIPEDF------------------------ 270
Query: 303 EDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DK+ +L F +KRA + +F+ LL FN GIHFS
Sbjct: 271 --------------SIADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|355344072|gb|AER59665.1| dimethyladenosine transferase 1-like protein [Capra hircus]
Length = 313
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/336 (53%), Positives = 221/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSIHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|166158346|ref|NP_001099878.2| probable dimethyladenosine transferase [Rattus norvegicus]
gi|165971279|gb|AAI58730.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Rattus
norvegicus]
Length = 313
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/358 (50%), Positives = 231/358 (64%), Gaps = 51/358 (14%)
Query: 2 AGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
A R+++ +Q+ G+ AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+L
Sbjct: 7 AASSRRRDRQEQR-----GELKRAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVL 61
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
E+GPGTGN+T KLLE K V+A ELD R+V EL +R Q TP +++L+V+ GDVLK+DLP+
Sbjct: 62 EVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPF 121
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FD CVAN+PYQISSP FKLL H+P FRCAI+MFQ+EFA+RL A+PGDKLYCRLS+NTQL
Sbjct: 122 FDACVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLAAKPGDKLYCRLSINTQL 181
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+
Sbjct: 182 LARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAA 241
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMD 301
F+ V +LEKNYR + S+ NT I D
Sbjct: 242 FKSSAVQQLLEKNYRI--------HCSVQNTVIPEDF----------------------- 270
Query: 302 VEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DK+ +L F +KRA + +F+ LL FN GIHFS
Sbjct: 271 ---------------SIADKIQQILTNTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|195503410|ref|XP_002098640.1| GE23825 [Drosophila yakuba]
gi|194184741|gb|EDW98352.1| GE23825 [Drosophila yakuba]
Length = 306
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/355 (50%), Positives = 236/355 (66%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+ KEK + Q QG I F+K GQHILKNPL++ S+++KA +++TDV+LEIG
Sbjct: 3 KVTKEKKSRIHNDVQKQG-----IVFNKDFGQHILKNPLVITSMLEKAALRATDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T +LE K VIA E+D+R+ ELQ+R Q+TP +L+V+ GD LK +LP+FD+
Sbjct: 58 PGTGNMTVPMLERAKKVIACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+AN+PYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CIANVPYQISSPLIFKLLLHRPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNFRPPPKV+SSVVR+EP+ P P VN EWDG RI F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFRPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+VL MLEKNY+ ++L++ VED
Sbjct: 238 TSVLEMLEKNYKLYRSLRNE------------------------------------PVED 261
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
D + ++KV+A+L + KRA + +F+ LL FN AGIHF+
Sbjct: 262 D----------FKMQNKVIAILEDQDMATKRARSMDIDDFMRLLLAFNSAGIHFN 306
>gi|354467604|ref|XP_003496259.1| PREDICTED: probable dimethyladenosine transferase-like [Cricetulus
griseus]
gi|344235961|gb|EGV92064.1| putative dimethyladenosine transferase [Cricetulus griseus]
Length = 313
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 222/335 (66%), Gaps = 46/335 (13%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 25 AGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVAC 84
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
ELD R+V EL +R Q TP +++L+V+ GDVLK+DLP+FD CVAN+PYQISSP FKLL H
Sbjct: 85 ELDPRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLH 144
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+S
Sbjct: 145 RPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVES 204
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
SVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LE+NYR
Sbjct: 205 SVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFKSSAVQQLLERNYRI------- 257
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
+ S+ NT I D DK+
Sbjct: 258 -HCSVHNTVIPEDF--------------------------------------SIADKIQQ 278
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 279 ILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|344272567|ref|XP_003408103.1| PREDICTED: probable dimethyladenosine transferase-like [Loxodonta
africana]
Length = 313
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/336 (53%), Positives = 220/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
GG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 STGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLK DLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPLASKLQVMVGDVLKADLPFFDACVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ SL NT I D DK+
Sbjct: 258 --HCSLHNTIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTNTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|350424981|ref|XP_003493975.1| PREDICTED: probable dimethyladenosine transferase-like [Bombus
impatiens]
Length = 306
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/333 (53%), Positives = 225/333 (67%), Gaps = 46/333 (13%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+ + GQHILKNPL+++S+V+KA ++ TDV+LEIGPGTGN+T KLL+ K VIA EL
Sbjct: 20 GILFNTNIGQHILKNPLVIQSMVEKAAVRPTDVVLEIGPGTGNMTVKLLDKAKKVIACEL 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV ELQ+R Q T Y ++L+++ GDVLKTDLP+FD+CVANIPYQISSPL FKLL H+P
Sbjct: 80 DVRMVAELQKRVQGTIYQSKLQIMIGDVLKTDLPFFDLCVANIPYQISSPLVFKLLLHRP 139
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL ARV L+KVGKNNFRPPPKV+S+V
Sbjct: 140 LFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDLLMKVGKNNFRPPPKVESNV 199
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEPR P P +N EWDG RI F+RKNKTLS+ F+ VL+MLEKNY+ +
Sbjct: 200 VRIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQTTVLTMLEKNYKL--------H 251
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
SL N EI + + + +D + + D
Sbjct: 252 CSLNNKEI------------PEGFNIKEMINDILQIADA--------------------- 278
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
E KRA + +F+ LL FN G+HF+
Sbjct: 279 -----ENKRARTMDIDDFISLLHAFNAQGVHFT 306
>gi|7657198|ref|NP_055288.1| probable dimethyladenosine transferase [Homo sapiens]
gi|114600097|ref|XP_517743.2| PREDICTED: probable dimethyladenosine transferase isoform 3 [Pan
troglodytes]
gi|397514383|ref|XP_003827467.1| PREDICTED: probable dimethyladenosine transferase [Pan paniscus]
gi|402871644|ref|XP_003899764.1| PREDICTED: probable dimethyladenosine transferase [Papio anubis]
gi|27151492|sp|Q9UNQ2.1|DIM1_HUMAN RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=DIM1 dimethyladenosine transferase 1 homolog;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName: Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|4050050|gb|AAC97955.1| putative dimethyladenosine transferase [Homo sapiens]
gi|14790071|gb|AAH10874.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Homo
sapiens]
gi|119571770|gb|EAW51385.1| dimethyladenosine transferase, isoform CRA_b [Homo sapiens]
gi|123981158|gb|ABM82408.1| dimethyladenosine transferase [synthetic construct]
gi|123995987|gb|ABM85595.1| dimethyladenosine transferase [synthetic construct]
gi|123996331|gb|ABM85767.1| dimethyladenosine transferase [synthetic construct]
gi|307684642|dbj|BAJ20361.1| DIM1 dimethyladenosine transferase 1-like [synthetic construct]
gi|355691339|gb|EHH26524.1| Putative dimethyladenosine transferase [Macaca mulatta]
gi|355759449|gb|EHH61619.1| Putative dimethyladenosine transferase [Macaca fascicularis]
gi|410208796|gb|JAA01617.1| DIM1 dimethyladenosine transferase 1-like [Pan troglodytes]
gi|410257122|gb|JAA16528.1| DIM1 dimethyladenosine transferase 1-like [Pan troglodytes]
gi|410299232|gb|JAA28216.1| DIM1 dimethyladenosine transferase 1-like [Pan troglodytes]
gi|410338827|gb|JAA38360.1| DIM1 dimethyladenosine transferase 1-like [Pan troglodytes]
Length = 313
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 221/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|351698203|gb|EHB01122.1| Putative dimethyladenosine transferase [Heterocephalus glaber]
Length = 299
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/334 (53%), Positives = 221/334 (66%), Gaps = 46/334 (13%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
GG++F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A E
Sbjct: 12 GGLTFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACE 71
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQ 145
LD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H+
Sbjct: 72 LDPRLVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHR 131
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SS
Sbjct: 132 PFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESS 191
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
VVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 192 VVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI-------- 243
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
+ S+ N I D DKV +
Sbjct: 244 HCSIHNIIIPEDF--------------------------------------SIADKVQQI 265
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
L F +KRA + +F+ LL FN GIHF+
Sbjct: 266 LTSTSFSDKRARCMDMDDFIRLLHGFNAEGIHFA 299
>gi|332233664|ref|XP_003266024.1| PREDICTED: probable dimethyladenosine transferase [Nomascus
leucogenys]
Length = 313
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 221/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|320166025|gb|EFW42924.1| dimethyladenosine transferase [Capsaspora owczarzaki ATCC 30864]
Length = 313
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 182/357 (50%), Positives = 225/357 (63%), Gaps = 48/357 (13%)
Query: 5 KIRKEKGKQKSGPYQGQGLG--AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
KIR E +++ + + I F KS GQHILKNPL+V I++KAG+++TD +LE
Sbjct: 3 KIRAESTSRRTRDETAKAASTVSQAIQFDKSFGQHILKNPLIVNGIIEKAGLRNTDTVLE 62
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
IGPGTGNLT KLLEA K V+A E+D R+V ELQ+R TPY L+++ GDVLK DLP+F
Sbjct: 63 IGPGTGNLTMKLLEASKKVVACEVDVRLVAELQKRVMGTPYQRNLEILVGDVLKADLPFF 122
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+CVAN+PYQISSP FKLL H+P FRCA++MFQKEFA RL A+PGD YCRLSVNTQL
Sbjct: 123 DVCVANMPYQISSPFVFKLLLHRPFFRCAVLMFQKEFAQRLYAKPGDPAYCRLSVNTQLL 182
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
ARV HL+KVG+NNFRPPP+V+S+VVRIEPR P P +N EWDG +RI F+RKNKTL + F
Sbjct: 183 ARVDHLMKVGRNNFRPPPQVESAVVRIEPRNPPPPINFQEWDGLVRITFVRKNKTLHAAF 242
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDV 302
VL ML++NYRT A L NTE+
Sbjct: 243 MSSAVLEMLDRNYRTFCA--------LNNTEL---------------------------- 266
Query: 303 EDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
E E K V +L F EKRA + +FL LL FN G+HF+
Sbjct: 267 ----------PEGFEIKPLVEQILEASGFSEKRARLMDTDDFLRLLEAFNNEGVHFA 313
>gi|297675337|ref|XP_002815639.1| PREDICTED: probable dimethyladenosine transferase isoform 1 [Pongo
abelii]
Length = 313
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 221/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 HILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|158258883|dbj|BAF85412.1| unnamed protein product [Homo sapiens]
Length = 313
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 221/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKEVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|348553891|ref|XP_003462759.1| PREDICTED: probable dimethyladenosine transferase-like [Cavia
porcellus]
Length = 313
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 177/336 (52%), Positives = 222/336 (66%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
GG++F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 STGGLTFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ NT I D +K+
Sbjct: 258 --HCSIHNTIIPEDF--------------------------------------SIANKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHF+
Sbjct: 278 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFA 313
>gi|194906638|ref|XP_001981404.1| GG11635 [Drosophila erecta]
gi|190656042|gb|EDV53274.1| GG11635 [Drosophila erecta]
Length = 306
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 176/355 (49%), Positives = 236/355 (66%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+ EK + Q QG I F+K GQHILKNPL++ ++++KA +++TDV+LEIG
Sbjct: 3 KVTTEKKSRIHNEVQKQG-----IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T ++LE K VIA E+D+R+ ELQ+R Q+TP +L+V+ GD LK +LP+FD+
Sbjct: 58 PGTGNMTVRMLERAKKVIACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+AN+PYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CIANVPYQISSPLIFKLLLHRPLFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNF+PPPKV+SSVVR+EP+ P P VN EWDG RI F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFKPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+VL MLEKNY+ ++L++ VED
Sbjct: 238 TSVLEMLEKNYKLYRSLRNE------------------------------------PVED 261
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
D + +DKV+++L E KRA + +F+ LL FN AGIHF+
Sbjct: 262 D----------FKMQDKVISILEEQDMAVKRARSMDIDDFMRLLLAFNSAGIHFN 306
>gi|149732873|ref|XP_001493943.1| PREDICTED: probable dimethyladenosine transferase-like [Equus
caballus]
Length = 313
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 220/335 (65%), Gaps = 46/335 (13%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA
Sbjct: 25 AGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIAC 84
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
ELD R+V EL +R Q TP + +L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H
Sbjct: 85 ELDPRLVAELHKRVQGTPLAGKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLH 144
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+S
Sbjct: 145 RPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVES 204
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
SVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 205 SVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQRLLEKNYRI------- 257
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
+ S+ N I D DK+
Sbjct: 258 -HCSVHNIIIPEDF--------------------------------------SIADKIQQ 278
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 279 ILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|410948671|ref|XP_003981054.1| PREDICTED: probable dimethyladenosine transferase [Felis catus]
Length = 313
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 221/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPP+V+
Sbjct: 144 HRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPRVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|74222329|dbj|BAE26964.1| unnamed protein product [Mus musculus]
Length = 313
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 178/335 (53%), Positives = 221/335 (65%), Gaps = 46/335 (13%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 25 AGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVAC 84
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
LD R+V EL +R Q TP +++L+V+ GDVLK+DLP+FD CVAN+PYQISSP FKLL H
Sbjct: 85 GLDPRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLH 144
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+S
Sbjct: 145 RPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVES 204
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
SVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 205 SVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------- 257
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
+ S+ NT I D DK+
Sbjct: 258 -HCSVQNTVIPEDF--------------------------------------SIADKIQQ 278
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 279 ILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|114051271|ref|NP_001039501.1| probable dimethyladenosine transferase [Bos taurus]
gi|114149276|sp|Q2KHT8.1|DIM1_BOVIN RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=DIM1 dimethyladenosine transferase 1 homolog;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName: Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|86438246|gb|AAI12887.1| DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Bos
taurus]
gi|296475843|tpg|DAA17958.1| TPA: probable dimethyladenosine transferase [Bos taurus]
gi|440902137|gb|ELR52971.1| Putative dimethyladenosine transferase [Bos grunniens mutus]
Length = 313
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 220/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLK DLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPLASKLQVMVGDVLKADLPFFDACVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|301761816|ref|XP_002916330.1| PREDICTED: probable dimethyladenosine transferase-like [Ailuropoda
melanoleuca]
Length = 313
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 221/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L + +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTSTGYSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|403267484|ref|XP_003925860.1| PREDICTED: probable dimethyladenosine transferase [Saimiri
boliviensis boliviensis]
Length = 313
Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 182/357 (50%), Positives = 231/357 (64%), Gaps = 51/357 (14%)
Query: 4 GKIRKEKGKQKSGPYQGQGL-GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
G + + +G+Q+ Q + L GG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE
Sbjct: 7 GAVGRRRGRQE----QHRELKSTGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLE 62
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPGTGN+T KLLE K V+A ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+F
Sbjct: 63 VGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPMASKLQVLVGDVLKTDLPFF 122
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D CVAN+PYQISSP FKLL H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL
Sbjct: 123 DACVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLL 182
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F
Sbjct: 183 ARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAF 242
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDV 302
+ V +LEKNYR + S+ N I D
Sbjct: 243 KSSAVQQLLEKNYRI--------HCSVHNIIIPEDF------------------------ 270
Query: 303 EDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DK+ +L F +KRA + +F+ LL FN GIHFS
Sbjct: 271 --------------SIADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|242015107|ref|XP_002428215.1| dimethyladenosine transferase, putative [Pediculus humanus
corporis]
gi|212512776|gb|EEB15477.1| dimethyladenosine transferase, putative [Pediculus humanus
corporis]
Length = 306
Score = 353 bits (905), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 184/356 (51%), Positives = 234/356 (65%), Gaps = 51/356 (14%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEI 63
GKI+K K + + +G+ G+ F KS GQHILKNPL+++++V+KA +KSTD++LEI
Sbjct: 2 GKIKKPKPTK-----ELKGVIKQGMLFKKSAGQHILKNPLVIQNMVEKAALKSTDIVLEI 56
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD 123
GPGTGN+T KLL+ K VIA E+D RMV ELQ+R Q TPY ++L++I GDVLK++LP+F+
Sbjct: 57 GPGTGNMTVKLLDKAKKVIACEVDVRMVAELQKRVQCTPYQSKLEIIVGDVLKSELPFFN 116
Query: 124 ICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
CVANIPYQISSPL FKLL H+P FRCAI+MFQKEFA RLVA+PGDKLYCRLS+NTQL A
Sbjct: 117 ACVANIPYQISSPLVFKLLLHRPFFRCAILMFQKEFAHRLVAKPGDKLYCRLSINTQLLA 176
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
RV ++KV KNNFRPPPKV+SSVVRIEPR P P + EWDG RI F+RKNKTL + FR
Sbjct: 177 RVDIVMKVAKNNFRPPPKVESSVVRIEPRNPPPPIQFKEWDGLTRIAFLRKNKTLGAAFR 236
Query: 244 LKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVE 303
+VL++LEKNY + SL N EI +
Sbjct: 237 QTSVLAVLEKNYMI--------HCSLNNIEIPNNF------------------------- 263
Query: 304 DDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+K+ +L + + KRA + +FL +L FN GIHFS
Sbjct: 264 -------------NIKEKIEPILEKIGADSKRARTMDIDDFLSVLYAFNAEGIHFS 306
>gi|380785603|gb|AFE64677.1| probable dimethyladenosine transferase [Macaca mulatta]
gi|383413105|gb|AFH29766.1| putative dimethyladenosine transferase [Macaca mulatta]
Length = 313
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/336 (52%), Positives = 220/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTL + F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLPAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|27151490|sp|Q95KJ0.1|DIM1_MACFA RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=DIM1 dimethyladenosine transferase 1 homolog;
AltName: Full=DIM1 dimethyladenosine transferase 1-like;
AltName: Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|13874484|dbj|BAB46866.1| hypothetical protein [Macaca fascicularis]
Length = 313
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 177/336 (52%), Positives = 221/336 (65%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL++R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELRKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+E A+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQRELALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 258 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 278 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|148233697|ref|NP_001089685.1| DIM1 dimethyladenosine transferase 1 homolog [Xenopus laevis]
gi|77748206|gb|AAI06333.1| MGC130862 protein [Xenopus laevis]
Length = 306
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/293 (58%), Positives = 218/293 (74%), Gaps = 8/293 (2%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+R EK ++ Q + + G+ F+ GQHILKNPL+V SI+ KA I+ TDV+LE+G
Sbjct: 3 KVRAEKKTRRH-----QEVKSQGVLFNTGLGQHILKNPLIVNSIIDKAAIRPTDVVLEVG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T KLLE K VIA ELD+R+V ELQ+R Q + +++L+V+ GDVLKTDLP+FD+
Sbjct: 58 PGTGNMTMKLLEKSKRVIACELDTRLVAELQKRVQGSAVASKLQVMVGDVLKTDLPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFAMRLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAMRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTL++ F+
Sbjct: 178 VDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAASFKS 237
Query: 245 KNVLSMLEKNYR---TLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDD 294
V +LEKNYR +L + +N S+ G T + +SM +DD
Sbjct: 238 TAVQELLEKNYRIHCSLHNISVPENFSIAEKIEGILTETGFSEKRARSMDIDD 290
>gi|432104598|gb|ELK31210.1| Putative dimethyladenosine transferase [Myotis davidii]
Length = 285
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 178/330 (53%), Positives = 218/330 (66%), Gaps = 46/330 (13%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA ELD R
Sbjct: 2 FNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELDPR 61
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H+P FR
Sbjct: 62 LVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPFFR 121
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
CAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SSVVRI
Sbjct: 122 CAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRI 181
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR + S+
Sbjct: 182 EPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI--------HCSV 233
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
NT I D DK+ +L
Sbjct: 234 HNTIIPEDF--------------------------------------SIADKIQQILTST 255
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F +KRA + +F+ LL FN GIHFS
Sbjct: 256 GFSDKRARSMDIDDFIRLLHGFNAEGIHFS 285
>gi|426384600|ref|XP_004058848.1| PREDICTED: probable dimethyladenosine transferase [Gorilla gorilla
gorilla]
Length = 313
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 181/356 (50%), Positives = 229/356 (64%), Gaps = 49/356 (13%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEI 63
G I + +G Q+ + + AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+
Sbjct: 7 GAIGRRRGWQEQ---RRELKSAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEV 63
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD 123
G GTGN+T KLLE K V+A ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD
Sbjct: 64 GSGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFD 123
Query: 124 ICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
CVAN+PYQISSP FKLL H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL A
Sbjct: 124 TCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLA 183
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
RV HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+
Sbjct: 184 RVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIIFVRKNKTLSAAFK 243
Query: 244 LKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVE 303
V +LEKNYR + S+ N I D
Sbjct: 244 SSAVQQLLEKNYRI--------HCSVHNIIIPEDF------------------------- 270
Query: 304 DDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DK+ +L F +KRA + +F+ LL FN GIHFS
Sbjct: 271 -------------SIADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>gi|260815743|ref|XP_002602632.1| hypothetical protein BRAFLDRAFT_225323 [Branchiostoma floridae]
gi|229287943|gb|EEN58644.1| hypothetical protein BRAFLDRAFT_225323 [Branchiostoma floridae]
Length = 306
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/355 (50%), Positives = 230/355 (64%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K++ K + Q QG+G F+K GQHILKNPL+V+S+V+KA ++ TD +LEIG
Sbjct: 3 KVKSAKTSRTHQEVQKQGIG-----FNKQFGQHILKNPLVVDSMVEKAALRPTDTVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGNLT K+++ K VIA E+D R+V ELQ+R Q TP +++L+++ GD LKTDLP+FDI
Sbjct: 58 PGTGNLTMKMIDRVKKVIACEIDPRLVAELQKRVQGTPSAHKLQMMVGDALKTDLPFFDI 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVANIPYQISSPL FKLL H+P FRCAI+MFQ+EFA RLVA PGDKLYCRLS+N QL AR
Sbjct: 118 CVANIPYQISSPLVFKLLLHRPFFRCAILMFQREFAQRLVAPPGDKLYCRLSLNVQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V HL+K+G+NNFRPPPKV+SSVVR+EP+ P P +N EWDG +RI F+RKNKTL + F+
Sbjct: 178 VDHLMKIGRNNFRPPPKVESSVVRLEPKNPPPPINFQEWDGMVRIAFLRKNKTLGAAFKN 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
VLS+LEKNYR + S N I D
Sbjct: 238 SKVLSLLEKNYRI--------HCSFNNIPISEDF-------------------------- 263
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ K KV +L ++KRA + +FL +L FN +GIHF+
Sbjct: 264 ------------DMKQKVTDILETNSLDKKRARSMDIDDFLGVLHAFNSSGIHFN 306
>gi|194745790|ref|XP_001955370.1| GF16271 [Drosophila ananassae]
gi|190628407|gb|EDV43931.1| GF16271 [Drosophila ananassae]
Length = 306
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 174/355 (49%), Positives = 233/355 (65%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K++ EK + Q QG I F+K GQHILKNPL++ S+++KA ++ TDV+LEIG
Sbjct: 3 KVKTEKKTRIHTEVQKQG-----IVFNKDFGQHILKNPLVITSMLEKAALRPTDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T ++LE K VIA E+D+R+ ELQ+R Q+TP +L+V+ GD LK +LP+FD+
Sbjct: 58 PGTGNMTVRMLEKAKKVIACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+AN+PYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CIANVPYQISSPLIFKLLLHRPLFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNF+PPPKV+SSVVR+EP+ P P VN EWDG RI F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFKPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+V+ MLEKNY+ ++L++ VED
Sbjct: 238 SSVIEMLEKNYKLYRSLRNE------------------------------------PVED 261
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
D ++KV+ +L E RA + +F+ LL FN AGIHF+
Sbjct: 262 D----------FNMQEKVIGILEELNMATNRARSMDIDDFMRLLLAFNSAGIHFN 306
>gi|195394465|ref|XP_002055863.1| GJ10534 [Drosophila virilis]
gi|194142572|gb|EDW58975.1| GJ10534 [Drosophila virilis]
Length = 306
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 236/355 (66%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K++ EK + Q QG I F+K GQHILKNPL++ ++++KA +++TDV+LEIG
Sbjct: 3 KVKTEKKSRIHNEVQKQG-----IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T ++LE K VIA E+D+R+ ELQ+R Q+TP +L+V+ GD LK DLP+FD+
Sbjct: 58 PGTGNMTVRMLERAKKVIACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKADLPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+AN+PYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CIANVPYQISSPLIFKLLLHRPLFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNF+PPPKV+SSVVR+EP+ P P VN EWDG RI F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFKPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+V+ ML+KNY+ ++L++ Q VE+
Sbjct: 238 NSVIEMLDKNYKLYRSLRNEQ------------------------------------VEE 261
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ ++KV+++L E RA + EF+ LL FN AGIHF+
Sbjct: 262 N----------FNMQEKVMSILEEQGVSGSRARSMDIDEFMRLLLAFNSAGIHFN 306
>gi|307172086|gb|EFN63666.1| Probable dimethyladenosine transferase [Camponotus floridanus]
Length = 263
Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 162/240 (67%), Positives = 200/240 (83%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+KSKGQHILKNPL+++S+V+KA +K TDV+LEIGPGTGN+T K+LE K VIA E+
Sbjct: 17 GILFNKSKGQHILKNPLIIQSMVEKAALKPTDVVLEIGPGTGNMTVKMLEKAKKVIACEI 76
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV ELQ+R Q T Y ++L+++ GDVLK+DLP+FD+CVANIPYQISSPL FKLL H+P
Sbjct: 77 DPRMVAELQKRVQGTVYQSKLQIMVGDVLKSDLPFFDLCVANIPYQISSPLIFKLLSHRP 136
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL ARV L+KVGKNNFRPPPKV+S+V
Sbjct: 137 IFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESNV 196
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEPR P P +N EWDG RI FIRKNKTLS+ F+ V+++LEKNY+ +L + N
Sbjct: 197 VRIEPRNPPPPINYQEWDGLTRIAFIRKNKTLSATFKQTTVITLLEKNYKIHCSLNNKVN 256
>gi|403370034|gb|EJY84877.1| Ribosomal RNA adenine dimethylase [Oxytricha trifallax]
Length = 424
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/385 (46%), Positives = 241/385 (62%), Gaps = 53/385 (13%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
+F K+ GQHILKNPL+V+ I++K+GIK TDV+LEIGPGTGNLT+ LLE K VIAVE+
Sbjct: 39 NFTFDKAFGQHILKNPLVVQQIIEKSGIKPTDVVLEIGPGTGNLTQSLLERSKKVIAVEI 98
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D+RMV E+ +R Y ++ ++IQGD +KT LP+FD+C+AN PYQISSPL FKLL H+P
Sbjct: 99 DARMVAEVSKRVNKLGYQHKFELIQGDAIKTPLPFFDLCIANTPYQISSPLVFKLLQHRP 158
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQ+EFA RL+A+PG +YCRLSVN QL ARV HL+KV KN+F+PPPKV+SSV
Sbjct: 159 IFRCAVLMFQREFAQRLIAKPGSDMYCRLSVNVQLLARVDHLIKVSKNSFKPPPKVESSV 218
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTL----QALQ 262
VRIEP+ P P +N EWDG +R+CF+RKNKT+S IFRLK +L ML NY T+ +A+
Sbjct: 219 VRIEPKFPPPPINFTEWDGLVRLCFLRKNKTMSGIFRLKQILKMLHSNYVTIHTPQKAID 278
Query: 263 SSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMD--------------VEDDDGD 308
+ + ++ +I + + ++N GVD + D + +D D
Sbjct: 279 NGKKQNVQAQDIDLTSFMMDEANALALGGVDGAKLSKKDKRKLKQQEQQQKAKQQKEDSD 338
Query: 309 SDVE-----------------------------------GEVSEFKDKVLAVLREGQFEE 333
D E + FK V+ L + ++
Sbjct: 339 DDNEEMKEDDMIDEDKEDDDEEQMNDEDDDGADDDNDPLKSIKAFKKLVVKTLEDNNMQD 398
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHF 358
KRA K+ +FL LL +FN+AGIHF
Sbjct: 399 KRACKMEIIDFLSLLRIFNEAGIHF 423
>gi|156542231|ref|XP_001600750.1| PREDICTED: probable dimethyladenosine transferase-like [Nasonia
vitripennis]
Length = 306
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/332 (52%), Positives = 224/332 (67%), Gaps = 46/332 (13%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+K GQHILKNPL+++S+V+KA ++ TDV+LE+GPGTGN+T K+LE K VIA E+
Sbjct: 20 GIVFNKDFGQHILKNPLIIQSMVEKAALRPTDVVLEVGPGTGNMTVKMLERSKKVIACEI 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D+RMV ELQ+R TP ++L+++ GDVLK DLP+FD+CVAN+PYQISSPL FKLL H+P
Sbjct: 80 DTRMVAELQKRVMGTPIQSKLQIMVGDVLKMDLPFFDLCVANVPYQISSPLVFKLLLHRP 139
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQ+EFA RLVA+PGDK YCRLSVNTQL ARV L+KVGKNNFRPPPKV+S+V
Sbjct: 140 LFRCAVLMFQREFAERLVAKPGDKDYCRLSVNTQLLARVDMLMKVGKNNFRPPPKVESNV 199
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEPR P P +N EWDG RI F+RKNKTLS+ F+ +V++M+EKNY+ +
Sbjct: 200 VRIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQSSVIAMMEKNYKI--------H 251
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
SL N + D D+ K+K+ A+L
Sbjct: 252 CSLHNIPLP----------------------DNFDI----------------KEKINAIL 273
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
E RA + +F+ +L +FNK G HF
Sbjct: 274 TNNSINELRARTMDIDDFIKVLQVFNKEGFHF 305
>gi|116063351|gb|AAI23078.1| LOC779588 protein [Xenopus (Silurana) tropicalis]
Length = 304
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 218/293 (74%), Gaps = 8/293 (2%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+R EK ++ Q + + G+ F+ GQHILKNPL+V SI+ KA I+ TDV+LE+G
Sbjct: 1 KVRAEKKTRRH-----QEVKSQGVLFNTGLGQHILKNPLIVNSIIDKAAIRPTDVVLEVG 55
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T KLLE K V+A ELD+R+V ELQ+R Q + +++L+V+ GDVLKTDLP+FD+
Sbjct: 56 PGTGNMTMKLLEKAKRVVACELDTRLVAELQKRVQGSAVASKLQVMVGDVLKTDLPFFDL 115
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 116 CVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLAR 175
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V H++KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTL++ F+
Sbjct: 176 VDHIMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAAAFKS 235
Query: 245 KNVLSMLEKNYR---TLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDD 294
V +LEKNY+ +L + +N S+ G T + +SM +DD
Sbjct: 236 TAVQELLEKNYKIHCSLHNISVPENFSIAEKIEGVLTETGFSEKRARSMDIDD 288
>gi|281348842|gb|EFB24426.1| hypothetical protein PANDA_004390 [Ailuropoda melanoleuca]
Length = 298
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/297 (58%), Positives = 216/297 (72%), Gaps = 12/297 (4%)
Query: 11 GKQKSGPYQGQGL-GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGN 69
G+++ Q + L AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN
Sbjct: 8 GRRRERLKQSRELKSAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGN 67
Query: 70 LTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANI 129
+T KLLE K VIA ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+
Sbjct: 68 MTVKLLEKAKKVIACELDPRLVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANL 127
Query: 130 PYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLL 189
PYQISSP FKLL H+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+
Sbjct: 128 PYQISSPFVFKLLLHRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLM 187
Query: 190 KVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V
Sbjct: 188 KVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQ 247
Query: 250 MLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGD--QSMGVDDGSDDEMDVED 304
+LEKNYR + S+ N I D S+ D S G D MD++D
Sbjct: 248 LLEKNYRI--------HCSVHNIIIPEDF-SIADKIQQILTSTGYSDKRARSMDIDD 295
>gi|241950377|ref|XP_002417911.1| 18S rRNA dimethylase, putative; S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase, putative;
dimethyladenosine transferase, putative [Candida
dubliniensis CD36]
gi|223641249|emb|CAX45629.1| 18S rRNA dimethylase, putative [Candida dubliniensis CD36]
Length = 330
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/360 (49%), Positives = 234/360 (65%), Gaps = 35/360 (9%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGGIS----FHKSKGQHILKNPLLVESIVQKAGIKSTDV 59
GK K+K S P + ++ F+ + GQHILKNPL+ + IV KA IK +D+
Sbjct: 2 GKAPKKKFSTASNPTANKVAAEKHLNSVFKFNTNLGQHILKNPLVAQGIVDKAQIKPSDI 61
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LE+GPGTGNLT ++LE + VIAVE+D RM EL +R TP +L+++ GD +KTDL
Sbjct: 62 VLEVGPGTGNLTVRILEKARKVIAVEMDPRMAAELTKRVHGTPQEKKLEILLGDFMKTDL 121
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFDIC++N PYQISSPL FKLL R +I+MFQ+EFA RLVA+PG++LYCRLS N
Sbjct: 122 PYFDICISNTPYQISSPLVFKLLNQPRPPRVSILMFQREFAQRLVARPGEELYCRLSANV 181
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
Q+ A V+H++KVGKNNFRPPP+V+SSVVRIE + PRP ++ EWDG LRI F+RKNKT++
Sbjct: 182 QMWANVTHIMKVGKNNFRPPPQVESSVVRIEVKNPRPNIDFNEWDGLLRIVFVRKNKTIA 241
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
+ F+ NV+ +LEKNY+T A Q S N ++N D SM VDD S
Sbjct: 242 AGFKSSNVIDILEKNYKTFLATQESTN----------------NNNTDDSMMVDDKSVSL 285
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DV K+K+ VL E F +KRA KL Q +FL LL F++ GIHF+
Sbjct: 286 KDV---------------VKNKITTVLTETGFSDKRAGKLDQTDFLKLLYAFHQVGIHFA 330
>gi|170016041|ref|NP_001116194.1| DIM1 dimethyladenosine transferase 1 homolog [Xenopus (Silurana)
tropicalis]
gi|169641837|gb|AAI60444.1| LOC779588 protein [Xenopus (Silurana) tropicalis]
Length = 306
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 218/293 (74%), Gaps = 8/293 (2%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+R EK ++ Q + + G+ F+ GQHILKNPL+V SI+ KA I+ TDV+LE+G
Sbjct: 3 KVRAEKKTRRH-----QEVKSQGVLFNTVLGQHILKNPLIVNSIIDKAAIRPTDVVLEVG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T KLLE K V+A ELD+R+V ELQ+R Q + +++L+V+ GDVLKTDLP+FD+
Sbjct: 58 PGTGNMTMKLLEKAKRVVACELDTRLVAELQKRVQGSAVASKLQVMVGDVLKTDLPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V H++KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTL++ F+
Sbjct: 178 VDHIMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAAAFKS 237
Query: 245 KNVLSMLEKNYR---TLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDD 294
V +LEKNY+ +L + +N S+ G T + +SM +DD
Sbjct: 238 TAVQELLEKNYKIHCSLHNISVPENFSIAEKIEGVLTETGFSEKRARSMDIDD 290
>gi|197246216|gb|AAI69134.1| hypothetical protein LOC779588 [Xenopus (Silurana) tropicalis]
Length = 306
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/293 (56%), Positives = 218/293 (74%), Gaps = 8/293 (2%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+R EK ++ Q + + G+ F+ GQHILKNPL+V SI+ KA I+ TDV+LE+G
Sbjct: 3 KVRAEKKTRRH-----QEVKSQGVLFNTGLGQHILKNPLIVNSIIDKAAIRPTDVVLEVG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T KLLE K V+A ELD+R+V ELQ+R Q + +++L+V+ GDVLKTDLP+FD+
Sbjct: 58 PGTGNMTMKLLEKAKRVVACELDTRLVAELQKRVQGSAVASKLQVMVGDVLKTDLPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V H++KVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKNKTL++ F+
Sbjct: 178 VDHIMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLAAAFKS 237
Query: 245 KNVLSMLEKNYR---TLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDD 294
V +LEKNY+ +L + +N S+ G T + +SM +DD
Sbjct: 238 TAVQELLEKNYKIHCSLHNISVPENFSIAEKIEGVLTETGFSEKRARSMDIDD 290
>gi|426246431|ref|XP_004016997.1| PREDICTED: probable dimethyladenosine transferase [Ovis aries]
Length = 285
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/330 (53%), Positives = 217/330 (65%), Gaps = 46/330 (13%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA ELD R
Sbjct: 2 FNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELDPR 61
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H+P FR
Sbjct: 62 LVAELHKRVQGTPLASKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPFFR 121
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
CA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SSVVRI
Sbjct: 122 CAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRI 181
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR + S+
Sbjct: 182 EPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI--------HCSI 233
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
N I D DK+ +L
Sbjct: 234 HNMIIPEDF--------------------------------------SIADKIQQILTST 255
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F +KRA + +F+ LL FN GIHFS
Sbjct: 256 GFSDKRARSMDIDDFIRLLHGFNAEGIHFS 285
>gi|321479018|gb|EFX89974.1| hypothetical protein DAPPUDRAFT_205158 [Daphnia pulex]
Length = 308
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/352 (51%), Positives = 235/352 (66%), Gaps = 46/352 (13%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K K ++KSG + G+ F+ S GQHILKNP +VES+V+KA ++STD +LEIGPGT
Sbjct: 3 KVKTEKKSGRKEVSSKEVQGLRFNTSLGQHILKNPKIVESMVEKAALRSTDTVLEIGPGT 62
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GN+T KLLE K V+A E+D RMV ELQ+R T +L ++ GDVLKT+LP+FD+CVA
Sbjct: 63 GNMTVKLLERSKRVVACEVDPRMVAELQKRVLGTHLQPKLHIMVGDVLKTELPFFDVCVA 122
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PYQISSP FKLL H+P FRCA++MFQ+EFA RL+A+PGDKLYCRLSVNTQL A+V H
Sbjct: 123 NLPYQISSPFVFKLLLHRPMFRCALLMFQREFAERLIAKPGDKLYCRLSVNTQLLAKVDH 182
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
+LKVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG +RI F+RKN+T+S++F+ +V
Sbjct: 183 VLKVGKNNFRPPPKVESSVVRIEPKNPAPPINFREWDGLVRIGFLRKNQTMSALFKHTSV 242
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
+++LEKNYRT ++SL N I + SL D Q++ V+ D
Sbjct: 243 VTVLEKNYRT--------HASLHNIVIPENF-SLKDKT--QAILVESKFD---------- 281
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA + +F+ LL FNK GIHF+
Sbjct: 282 -------------------------QKRARTMDMDDFIALLHAFNKEGIHFA 308
>gi|91091694|ref|XP_972612.1| PREDICTED: similar to dimethyladenosine transferase [Tribolium
castaneum]
gi|270001061|gb|EEZ97508.1| hypothetical protein TcasGA2_TC011352 [Tribolium castaneum]
Length = 306
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 177/338 (52%), Positives = 226/338 (66%), Gaps = 46/338 (13%)
Query: 22 GLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMV 81
+ GI+F+KS GQHILKNPL++ S++ KA +K +D +LEIGPGTGNLT KLLE+ K V
Sbjct: 15 AVAKQGITFNKSFGQHILKNPLVITSMLDKAALKPSDTVLEIGPGTGNLTLKLLESVKQV 74
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKL 141
+A E+D R+V ELQ+R Q++P+ ++L+++ GDVLKT+LP+F +CVANIPYQISSPL FKL
Sbjct: 75 VACEIDHRLVAELQKRVQNSPFKSKLQILIGDVLKTELPFFSVCVANIPYQISSPLVFKL 134
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L H+P FRCA++MFQKEFA RLVA PGDKLYCRLS+NTQL ARV L+KVGKNNFRPPPK
Sbjct: 135 LLHRPFFRCAVLMFQKEFADRLVAVPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPK 194
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL 261
V+S+VVRIEPR P P ++ EWDG RI F RKNKTL + FR VL+ LEKNY++
Sbjct: 195 VESAVVRIEPRNPPPPISYTEWDGLTRIAFSRKNKTLGAAFRQSVVLATLEKNYKSF--- 251
Query: 262 QSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDK 321
S+ N EI P K+K
Sbjct: 252 -----CSVNNKEI---PPGFN-----------------------------------IKEK 268
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
V VL++ + ++KRA + +F+ LL FN GIHFS
Sbjct: 269 VEQVLKQVEGDQKRARTMDIDDFMVLLHAFNSEGIHFS 306
>gi|355683951|gb|AER97244.1| DIM1 dimethyladenosine transferase 1-like protein [Mustela putorius
furo]
Length = 298
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/283 (59%), Positives = 209/283 (73%), Gaps = 11/283 (3%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LE+NYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLERNYRI------ 257
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGD--QSMGVDDGSDDEMDVED 304
+ S+ N I D S+ D S G D MD++D
Sbjct: 258 --HCSVHNIIIPEDF-SIADKIQQILTSTGFSDKRARSMDIDD 297
>gi|291235880|ref|XP_002737862.1| PREDICTED: Probable dimethyladenosine transferase-like
[Saccoglossus kowalevskii]
Length = 305
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 175/355 (49%), Positives = 228/355 (64%), Gaps = 52/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K++ EK + +Q G+ F + GQHILKNPL+V+ I++KA +++TDV LE+G
Sbjct: 3 KVKTEKKSRTHKQFQQ------GVQFKRDLGQHILKNPLVVDGIIEKAALRNTDVALEVG 56
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T KLL+ K V+A ELD R+ E+Q+R Q TP +L++I GDVLK+DLP+FD+
Sbjct: 57 PGTGNMTVKLLDKVKKVVACELDPRLAAEVQKRVQGTPSQTKLQLIIGDVLKSDLPFFDV 116
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 117 CVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLAR 176
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V ++KVGKNNFRPPPKV+SSVVR+EPR P P +N EWDG +RI F RKNKTLS+ F+
Sbjct: 177 VDLVMKVGKNNFRPPPKVESSVVRLEPRNPPPPINFQEWDGLVRIAFTRKNKTLSAAFKH 236
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+VL MLEKNYR + S+ N + TD
Sbjct: 237 NSVLEMLEKNYRI--------HCSVKNITVATDF-------------------------- 262
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
KDK+ +L + +F + RA + +FL LL N GIHF+
Sbjct: 263 ------------SIKDKLEKILLDNEFSKMRARTMDIDDFLKLLHCMNSEGIHFA 305
>gi|326934876|ref|XP_003213509.1| PREDICTED: probable dimethyladenosine transferase-like [Meleagris
gallopavo]
Length = 385
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 175/337 (51%), Positives = 221/337 (65%), Gaps = 46/337 (13%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
G I F+ GQHILKNPL+V SI++KA ++ TD++LE+GPGTGNLT K+LE K VI
Sbjct: 95 FAVGCILFNTGAGQHILKNPLVVNSIIEKAALRRTDIVLEVGPGTGNLTVKMLEKVKKVI 154
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
A E+D R+V ELQ+R Q T +N+L++ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 155 ACEIDPRLVGELQKRVQGTCLANKLEIKVGDVLKTDLPFFDACVANLPYQISSPFVFKLL 214
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H+P FRCAI+MFQ+EFA+RLVA+PG KLYCRLS+NTQL ARV HL+KVGKNNF+PPPKV
Sbjct: 215 LHRPFFRCAILMFQREFALRLVAKPGSKLYCRLSINTQLLARVDHLMKVGKNNFKPPPKV 274
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQ 262
+SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +L+ NYR
Sbjct: 275 ESSVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFKSSAVEQLLDHNYRI----- 329
Query: 263 SSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKV 322
+ SL N EI E + +K+
Sbjct: 330 ---HCSLHNAEI--------------------------------------PENFKISEKI 348
Query: 323 LAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VL++ + EKRA + +F+ LL FN GIHFS
Sbjct: 349 QTVLKDTGYSEKRARSMDIDDFIRLLHGFNSEGIHFS 385
>gi|67463766|pdb|1ZQ9|A Chain A, Crystal Structure Of Human Dimethyladenosine Transferase
gi|67463767|pdb|1ZQ9|B Chain B, Crystal Structure Of Human Dimethyladenosine Transferase
Length = 285
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 174/325 (53%), Positives = 215/325 (66%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A ELD R+V EL
Sbjct: 7 GQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAEL 66
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H+P FRCAI+M
Sbjct: 67 HKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILM 126
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P
Sbjct: 127 FQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNP 186
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR + S+ N I
Sbjct: 187 PPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI--------HCSVHNIII 238
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
D DK+ +L F +K
Sbjct: 239 PEDF--------------------------------------SIADKIQQILTSTGFSDK 260
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA + +F+ LL FN GIHFS
Sbjct: 261 RARSMDIDDFIRLLHGFNAEGIHFS 285
>gi|195108513|ref|XP_001998837.1| GI24187 [Drosophila mojavensis]
gi|193915431|gb|EDW14298.1| GI24187 [Drosophila mojavensis]
Length = 306
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 171/355 (48%), Positives = 233/355 (65%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K++ EK + Q QG I F+K GQHILKNPL++ ++++KA +++TDV+LEIG
Sbjct: 3 KVKTEKKSRIHNEVQKQG-----IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T ++LE K VIA E+D+R+ ELQ+R Q TP +L+V+ GD LK DLP+FD+
Sbjct: 58 PGTGNMTVRMLERAKKVIACEIDTRLAAELQKRVQGTPMQPKLQVLIGDFLKADLPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+AN+PYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CIANVPYQISSPLIFKLLLHRPLFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNF+PPPKV+SSVVR+EP+ P P +N EWDG RI F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFKPPPKVESSVVRLEPKNPPPPINFTEWDGLTRIAFLRKNKTLAATFKV 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+V+ MLEKNY+ ++L++ +E+
Sbjct: 238 NSVMEMLEKNYKLYRSLRNE------------------------------------PIEE 261
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ ++KV+ +L E RA + EF+ LL FN AGIHF+
Sbjct: 262 N----------FNMQEKVMGILEELGVSGSRARSMDIDEFMRLLLAFNSAGIHFN 306
>gi|125774831|ref|XP_001358667.1| GA11224 [Drosophila pseudoobscura pseudoobscura]
gi|195145334|ref|XP_002013651.1| GL24250 [Drosophila persimilis]
gi|54638406|gb|EAL27808.1| GA11224 [Drosophila pseudoobscura pseudoobscura]
gi|194102594|gb|EDW24637.1| GL24250 [Drosophila persimilis]
Length = 306
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 169/355 (47%), Positives = 234/355 (65%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K++ EK + Q QG I F+K GQHILKNPL++ ++++KA ++ TDV+LEIG
Sbjct: 3 KVKTEKKSRVHNEVQKQG-----IVFNKDFGQHILKNPLVITTMLEKAALRPTDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T ++LE K VIA E+D+R+ ELQ+R Q+TP +L+++ GD LK +LP+FD+
Sbjct: 58 PGTGNMTVRMLEKAKKVIACEIDTRLAAELQKRVQATPMQPKLQILIGDFLKAELPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+AN+PYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CIANVPYQISSPLIFKLLLHRPIFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNFRPPPKV+SSVVR+EP+ P P VN EWDG RI F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFRPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+V+ MLEKNY+ ++L++ +++G +
Sbjct: 238 SSVIEMLEKNYKVFRSLRNE--------------------------PLEEGFN------- 264
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
++KV+ +L E + RA + +F+ LL FN GIHF+
Sbjct: 265 -------------MQEKVIGILEELEMATLRARSMDIDDFMRLLRAFNSKGIHFN 306
>gi|363744008|ref|XP_424746.3| PREDICTED: probable dimethyladenosine transferase [Gallus gallus]
Length = 307
Score = 346 bits (888), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 222/335 (66%), Gaps = 46/335 (13%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
A GI F+ GQHILKNPL+V SI++KA ++ TDV+LE+GPGTGNLT K+LE K VIA
Sbjct: 19 ANGILFNTGAGQHILKNPLVVNSIIEKAALRRTDVVLEVGPGTGNLTVKMLEKVKKVIAC 78
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E+D R+V ELQ+R Q T +N+L++ GDVLKT+LP+FD CVAN+PYQISSP FKLL H
Sbjct: 79 EIDPRLVGELQKRVQGTCLANKLEIKVGDVLKTELPFFDACVANLPYQISSPFVFKLLLH 138
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P FRCAI+MFQ+EFA+RLVA+PG KLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+S
Sbjct: 139 RPFFRCAILMFQREFALRLVAKPGSKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVES 198
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
SVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +L+ NYR
Sbjct: 199 SVVRIEPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFKSSAVEQLLDHNYRI------- 251
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
+ SL N EI E + +K+
Sbjct: 252 -HCSLHNAEI--------------------------------------PENFKISEKIQT 272
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VL++ + EKRA + +F+ LL FN GIHFS
Sbjct: 273 VLKDTGYSEKRARSMDIDDFIRLLHGFNSEGIHFS 307
>gi|335775227|gb|AEH58501.1| dimethyladenosine transferase-like protein [Equus caballus]
Length = 280
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/325 (53%), Positives = 214/325 (65%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA ELD R+V EL
Sbjct: 2 GQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIACELDPRLVAEL 61
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP + +L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H+P FRCA++M
Sbjct: 62 HKRVQGTPLAGKLQVMVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLHRPFFRCAVLM 121
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P
Sbjct: 122 FQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNP 181
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR + S+ N I
Sbjct: 182 PPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQRLLEKNYRI--------HCSVHNIII 233
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
D DK+ +L F +K
Sbjct: 234 PEDF--------------------------------------SIADKIQQILTSTGFSDK 255
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA + +F+ LL FN GIHFS
Sbjct: 256 RARSMDIDDFIRLLHGFNAEGIHFS 280
>gi|195449214|ref|XP_002071976.1| GK22567 [Drosophila willistoni]
gi|194168061|gb|EDW82962.1| GK22567 [Drosophila willistoni]
Length = 306
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 172/355 (48%), Positives = 233/355 (65%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K++ EK + Q QG I F+K GQHILKNPL++ ++++KA ++ TDV+LEIG
Sbjct: 3 KVKTEKKSRVHNEVQKQG-----IVFNKDFGQHILKNPLIITAMLEKAALRPTDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T ++LE K VIA E+D+R+ ELQ+R Q+TP +L+V+ GD LK +LP+FD+
Sbjct: 58 PGTGNMTVRILEKSKKVIACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+AN+PYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CIANVPYQISSPLIFKLLLHRPLFRCAVLMFQQEFAQRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNFRPPPKV+SSVVR+EP+ P P VN EWDG RI F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFRPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+V+ MLEKNY+ ++L++ Q L ++ Q+
Sbjct: 238 NSVIEMLEKNYKLYRSLRNEQ---------------LEENFNMQA--------------- 267
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K++ +L KRA + +F+ LL FN AGIHF+
Sbjct: 268 ----------------KIIRILEALDMATKRARSMDIDDFMRLLLAFNSAGIHFN 306
>gi|12803983|gb|AAH02841.1| DIMT1L protein [Homo sapiens]
Length = 275
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 157/233 (67%), Positives = 192/233 (82%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYR 256
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYR 256
>gi|217073100|gb|ACJ84909.1| unknown [Medicago truncatula]
Length = 225
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/204 (83%), Positives = 185/204 (90%), Gaps = 9/204 (4%)
Query: 1 MAGGKIRKEKGKQKS--GPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTD 58
MAGGKIRKEKGK S PYQG GISFHKSKGQHILKNPLLV++IVQK+GIK+TD
Sbjct: 1 MAGGKIRKEKGKPSSQHTPYQG------GISFHKSKGQHILKNPLLVDTIVQKSGIKTTD 54
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
V+LEIGPGTGNLTKKLLEAGK VIAVE+D RMVLEL +RFQ TP S+RL VIQGDVLKT+
Sbjct: 55 VVLEIGPGTGNLTKKLLEAGKKVIAVEIDPRMVLELNKRFQGTP-SSRLTVIQGDVLKTE 113
Query: 119 LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVN 178
LPYFDICVANIPYQISSPLTFKLL HQPAFRCAIIMFQ+EFAMRLVAQPGDKLYCRL+VN
Sbjct: 114 LPYFDICVANIPYQISSPLTFKLLKHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVN 173
Query: 179 TQLHARVSHLLKVGKNNFRPPPKV 202
TQLHAR+SHLLKVG+NNF PPPK+
Sbjct: 174 TQLHARISHLLKVGRNNFTPPPKL 197
>gi|225714284|gb|ACO12988.1| Probable dimethyladenosine transferase [Lepeophtheirus salmonis]
Length = 312
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/356 (49%), Positives = 227/356 (63%), Gaps = 47/356 (13%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGA-GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
GK++ EK ++ + G G+ F+ + GQHILKNP +V+SIV+++G++STD +LE
Sbjct: 2 GKVKSEKRSSRTQSKSSEAAGGRQGLVFNTTLGQHILKNPAVVDSIVEESGLRSTDTVLE 61
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
IGPGTGNLT KLLE K VI E+D RMV ELQ+ FQ + Y ++L +I GD +KTDLP+F
Sbjct: 62 IGPGTGNLTAKLLEKVKRVIVCEVDPRMVAELQKHFQHSSYKSKLDIIVGDAIKTDLPFF 121
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+CVAN+PYQISSPL FKLL H+P FR A++MFQ+EFA RL+A PGDKLYCRLS+NTQL
Sbjct: 122 DVCVANVPYQISSPLVFKLLLHRPFFRVAVLMFQREFAQRLIAPPGDKLYCRLSINTQLL 181
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
+ V HLLKVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG RICF+RKNKTL + F
Sbjct: 182 STVHHLLKVGKNNFRPPPKVESSVVRIEPKNPPPPINFKEWDGLTRICFVRKNKTLGAAF 241
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDV 302
VL L+K+YRT +L+ +EM
Sbjct: 242 SQTPVLLTLDKSYRTHMSLK-----------------------------------EEMLP 266
Query: 303 EDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
E+ K+ ++ VL F EKR + +F+ L+ FN G+HF
Sbjct: 267 EE-----------FSIKELIVDVLESIDFSEKRPRTMDIDDFMKLMHAFNSVGVHF 311
>gi|119571771|gb|EAW51386.1| dimethyladenosine transferase, isoform CRA_c [Homo sapiens]
Length = 266
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 157/233 (67%), Positives = 192/233 (82%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVA 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 84 CELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 144 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYR 256
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 204 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYR 256
>gi|170058055|ref|XP_001864755.1| dimethyladenosine transferase [Culex quinquefasciatus]
gi|167877296|gb|EDS40679.1| dimethyladenosine transferase [Culex quinquefasciatus]
Length = 306
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 179/355 (50%), Positives = 227/355 (63%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+R EK + QG I F+K GQHILKNPL+V S+++KA ++ TDV+LEIG
Sbjct: 3 KVRAEKKTRVHTEVAKQG-----IVFNKDFGQHILKNPLIVTSMLEKAALRPTDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T K+LE K VIA E+D R+V ELQ+R Q TP ++L+++ GDVLK DLP+FD
Sbjct: 58 PGTGNMTVKILEKVKKVIACEIDPRLVAELQKRVQGTPMQSKLQILIGDVLKADLPFFDC 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVAN+PYQISSP FKLL H+P FRCA++MFQ EFA RLVA+PGDKLYCRLSVNTQL AR
Sbjct: 118 CVANMPYQISSPFVFKLLLHRPFFRCAVLMFQLEFAQRLVAKPGDKLYCRLSVNTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+K+GKNNFRPPPKV+SSVVRIEPR P P +N EWDG RI F+RKNKTLS+ F+
Sbjct: 178 VDMLMKIGKNNFRPPPKVESSVVRIEPRNPPPPINYTEWDGLTRIAFLRKNKTLSAAFKQ 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
VL+ LE+NY+ + SL N ++ + ++ + D G+D GS
Sbjct: 238 TTVLTALEQNYK--------MHCSLKNVDLPAEF-NIKEKVEDILNGIDAGS-------- 280
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
KRA + +F+ +L FN GIHFS
Sbjct: 281 -----------------------------KRARTMDTDDFMAVLHAFNAEGIHFS 306
>gi|452820627|gb|EME27667.1| dimethyladenosine transferase [Galdieria sulphuraria]
Length = 329
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/336 (53%), Positives = 235/336 (69%), Gaps = 16/336 (4%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
G G F K +GQHILKNPL+V SI++KA +K TD++LEIGPGTGN+T KLL+ K VIA
Sbjct: 10 GHRGFEFKKERGQHILKNPLVVNSILEKAALKPTDIVLEIGPGTGNMTVKLLQLVKKVIA 69
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
VE+D RM +EL RR Q +P RL++IQ D+LK +LPYFD+CVANIPYQISSPL FKLL
Sbjct: 70 VEIDPRMTVELYRRVQFSPLKERLELIQADILKMELPYFDVCVANIPYQISSPLIFKLLA 129
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P R +++M Q+EFAMRL+AQPG +LYCRLSVN + ARVSHL+KV +N+FRPPPKVD
Sbjct: 130 HRPFHRYSVLMLQREFAMRLIAQPGSELYCRLSVNAKALARVSHLMKVSRNSFRPPPKVD 189
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEPR P P N +EWDG LRICF RKNKTL I + VLS+L N + LQ +Q
Sbjct: 190 SSVVRIEPRNPPPPGNFLEWDGLLRICFQRKNKTLGGIMKQHAVLSLLNSNEKQLQMMQG 249
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+++ E+ TP M ++ + + E+DD D + E+ K+K++
Sbjct: 250 LESA----MEL---TP---------MMTDEEELSKKEEEEEDDDDDNETEELKGMKEKIM 293
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L + F + RASK++ +F LL FN+AG+HF
Sbjct: 294 RLLEQNNFSKCRASKMSLDDFRRLLKTFNEAGLHFC 329
>gi|196010894|ref|XP_002115311.1| hypothetical protein TRIADDRAFT_29342 [Trichoplax adhaerens]
gi|190582082|gb|EDV22156.1| hypothetical protein TRIADDRAFT_29342 [Trichoplax adhaerens]
Length = 280
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 173/325 (53%), Positives = 213/325 (65%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNPL+V SIV+KA I+STD +LEIGPGTGNLT KLL+ K VIA E+D R+ EL
Sbjct: 2 GQHILKNPLIVNSIVEKAAIRSTDTVLEIGPGTGNLTVKLLQKAKKVIACEVDPRLAAEL 61
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
Q+R Q +P S +L +I GDVLKT+LPYFD+CVAN+PYQISSP FKLL H+P FRCA++M
Sbjct: 62 QKRVQGSPVSTKLHIIVGDVLKTELPYFDVCVANLPYQISSPFVFKLLLHRPLFRCAVLM 121
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA+PGDKLYCRLS+NTQL A+V HL+KVGKNNFRPPPKV+SSVVRIEP P
Sbjct: 122 FQREFALRLVAKPGDKLYCRLSINTQLLAKVDHLIKVGKNNFRPPPKVESSVVRIEPINP 181
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P +N EWDG RI F RKN+TLS+ F+ + V +MLEKN+R + S+ N I
Sbjct: 182 VPPINFKEWDGLTRIVFARKNRTLSASFKTQGVQTMLEKNFRI--------HCSIHNQAI 233
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
D +KV +L+ +
Sbjct: 234 EEDI--------------------------------------NIAEKVDTILKSVNANAR 255
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA + +FL LL FN GIHF+
Sbjct: 256 RARSMDMDDFLELLHAFNSNGIHFA 280
>gi|289740727|gb|ADD19111.1| ribosomal RNA adenine dimethylase [Glossina morsitans morsitans]
Length = 306
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 177/355 (49%), Positives = 231/355 (65%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K++ EK + Q QG I F+K GQHILKNPL++ S+++KA I+STDVILEIG
Sbjct: 3 KVKSEKRNRLHHEVQKQG-----ILFNKEFGQHILKNPLVITSMLEKAAIRSTDVILEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T ++LE K VIA E+D+R+ ELQ+R Q+TP +L+++ GD LK DLP+FD+
Sbjct: 58 PGTGNMTVRMLERCKKVIACEIDTRLAAELQKRVQATPMQYKLQILIGDFLKADLPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+ANIPYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PG+KLYCRLSVNTQL AR
Sbjct: 118 CIANIPYQISSPLIFKLLLHRPLFRCAVLMFQREFAQRLVAKPGEKLYCRLSVNTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNF+PPPKV+SSVVR+EP+ P P VN EWDG R+ F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFKPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRVAFLRKNKTLAAAFKI 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
+VL MLEKNY+ + SL N I + N D
Sbjct: 238 NSVLEMLEKNYKL--------HLSLRNKPI--------EENFD----------------- 264
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ KV+ +L + RA + +F+ LL FN GIHF+
Sbjct: 265 -------------MQAKVVNILEKLNMANTRARSMDLDDFMRLLLAFNSEGIHFN 306
>gi|307211915|gb|EFN87842.1| Probable dimethyladenosine transferase [Harpegnathos saltator]
Length = 306
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/333 (52%), Positives = 224/333 (67%), Gaps = 46/333 (13%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+K GQHILKNPL+++++V+KA ++ TDVILE+GPGTGN+T KLLE K VIA E+
Sbjct: 20 GILFNKDFGQHILKNPLIIQNMVEKAALRPTDVILEVGPGTGNMTIKLLEKAKKVIAYEV 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D R+V ELQ+R Q T Y +L+++ GDVLK+DLP+FD+CVANIPYQISSPL FKLL H+P
Sbjct: 80 DPRLVAELQKRVQGTLYQPKLEIMVGDVLKSDLPFFDLCVANIPYQISSPLVFKLLLHRP 139
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL ARV L+KVGKNNF+PPPKV+S+V
Sbjct: 140 LFRCAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFKPPPKVESNV 199
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEPR P P +N EWD RI F+RKNKTLS+ F+ V +MLEKNY+ +
Sbjct: 200 VRIEPRNPSPPINYQEWDSLTRIAFLRKNKTLSAAFKQNTVTTMLEKNYKI--------H 251
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
SL N V D+ D + + D +L
Sbjct: 252 CSLNN-----------------------------KVFPDNFD------IKQLADH---IL 273
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
++ + E KRA + +F+ LL FN G+HF+
Sbjct: 274 KKTKAENKRARTMDIPDFIKLLHAFNAEGVHFA 306
>gi|428181600|gb|EKX50463.1| hypothetical protein GUITHDRAFT_135139 [Guillardia theta CCMP2712]
Length = 320
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/328 (51%), Positives = 222/328 (67%), Gaps = 30/328 (9%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KS+GQH L NPL+++ I+ KA I++TDV+LEIGPG G LT KLLE K VIA+ELD+R
Sbjct: 23 KSRGQHFLANPLIIQGIIDKADIRATDVVLEIGPGNGALTAKLLEKAKKVIAIELDTRWA 82
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
ELQ+RF + N+L++I DVL+ DLP+FDICVAN+PYQIS+P+T KLL H+P FRCA
Sbjct: 83 AELQKRF-GVMHGNKLEIINNDVLRVDLPFFDICVANLPYQISAPITNKLLMHRPQFRCA 141
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++MFQ+EFA+RL A+PGD+LYCRLS+NT L A V HL+KVGKNNF+PPPKV+SSVVRI P
Sbjct: 142 VLMFQREFALRLCAKPGDELYCRLSLNTSLLAEVQHLIKVGKNNFKPPPKVESSVVRITP 201
Query: 212 RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGN 271
R P +N +EWDG +R+ F RKNKTL + FR K+V+ +L+ NY A+ S+N+S G+
Sbjct: 202 RSNPPAINYMEWDGLIRLAFGRKNKTLGATFRQKDVIDLLKNNYNMHAAIMKSKNASSGD 261
Query: 272 TEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQF 331
+ GDQS G ++ DE+ K +L +L
Sbjct: 262 VTM-----------GDQSSGKEEKKFDEV------------------KQTILEILEAENM 292
Query: 332 EEKRASKLTQQEFLYLLSLFNKAGIHFS 359
E+R +KL FL LL+ FN G HF+
Sbjct: 293 SEQRPAKLDVDHFLTLLNAFNVKGFHFA 320
>gi|195036390|ref|XP_001989653.1| GH18676 [Drosophila grimshawi]
gi|193893849|gb|EDV92715.1| GH18676 [Drosophila grimshawi]
Length = 306
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 163/294 (55%), Positives = 222/294 (75%), Gaps = 10/294 (3%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K++ EK + Q QG I F+K GQHILKNPL++ ++++KA +++TDV+LEIG
Sbjct: 3 KVKTEKKSRIHHEVQKQG-----IVFNKDFGQHILKNPLVITTMLEKAALRATDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T ++LE K VIA E+D+R+ ELQ+R Q+TP +L+V+ GD LK +LP+FD+
Sbjct: 58 PGTGNMTVRMLERAKKVIACEIDTRLAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDL 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C+AN+PYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLSVNTQL AR
Sbjct: 118 CIANVPYQISSPLIFKLLLHRPLFRCAVLMFQREFAQRLVAKPGDKLYCRLSVNTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNF+PPPKV+SSVVR+EP+ P P VN EWDG RI F+RKNKTL++ F++
Sbjct: 178 VDMLMKVGKNNFKPPPKVESSVVRLEPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKV 237
Query: 245 KNVLSMLEKNYRTLQALQS---SQNSSLGNTEIGT-DTPSLGDSNGDQSMGVDD 294
+V+ MLEKNY+ ++L++ +N ++ IG D +G S +SM +D+
Sbjct: 238 NSVMEMLEKNYKLYRSLRNEPLEENFNIQEKIIGILDEQGMGQSRA-RSMDIDE 290
>gi|330844811|ref|XP_003294306.1| hypothetical protein DICPUDRAFT_84787 [Dictyostelium purpureum]
gi|325075260|gb|EGC29171.1| hypothetical protein DICPUDRAFT_84787 [Dictyostelium purpureum]
Length = 315
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 175/329 (53%), Positives = 230/329 (69%), Gaps = 44/329 (13%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
+KS GQH+LKNPL+++SIV+KA +KSTD +LEIGPGTGNLT KLLE K VIAVE+D R
Sbjct: 30 MNKSYGQHLLKNPLIIDSIVEKAQLKSTDTVLEIGPGTGNLTMKLLENCKKVIAVEVDPR 89
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M ELQ+R ++PY+ L++I GD LK DLPYFD+CVAN+PYQISSPLTFKLL H+P FR
Sbjct: 90 MAAELQKRVAASPYAQHLQIILGDFLKVDLPYFDVCVANVPYQISSPLTFKLLAHRPIFR 149
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
A++MFQ+EFA+RL A+PGD LYCRLSVNTQL ++V+HL+KVGKNNF PPPKV+S+VV+I
Sbjct: 150 TAVLMFQREFALRLAAKPGDSLYCRLSVNTQLLSKVTHLMKVGKNNFLPPPKVESAVVKI 209
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EP P P +N +EWDG +++CF RKNKTLS IFR+ +V+ L +NY+T A+
Sbjct: 210 EPFNPPPPINFIEWDGLVKLCFSRKNKTLSGIFRVGSVIETLNQNYKTYCAVSG------ 263
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
++GT DGSD++M KD ++ L +
Sbjct: 264 ---KMGT-----------------DGSDEQM------------------KDLIIKTLSDM 285
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
++ E R+SK+ +FL LL+ F+ GIHF
Sbjct: 286 EYLENRSSKMDINDFLKLLNSFHANGIHF 314
>gi|68467333|ref|XP_722328.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|68467562|ref|XP_722214.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|46444170|gb|EAL03447.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|46444295|gb|EAL03571.1| likely dimethyladenosine transferase [Candida albicans SC5314]
gi|238878254|gb|EEQ41892.1| dimethyladenosine transferase [Candida albicans WO-1]
Length = 326
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/330 (51%), Positives = 222/330 (67%), Gaps = 35/330 (10%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + VIAVE+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEKARKVIAVEMDPR 91
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KTDLPYFDIC++N PYQISSPL FKLL R
Sbjct: 92 MAAELTKRVHGTPQEKKLEILLGDFMKTDLPYFDICISNTPYQISSPLVFKLLNQPRPPR 151
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFA RLVA+PG++LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 152 VSILMFQREFAQRLVARPGEELYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRI F+RKNKT+++ F+ NV+ +LEKNY+T A Q
Sbjct: 212 EIKNPRPNIDFNEWDGLLRIVFVRKNKTIAAGFKSSNVIEILEKNYKTFLATQ------- 264
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
+SN + SM VDD S DV K+K+ VL E
Sbjct: 265 -------------ESNNNDSMMVDDKSISLKDV---------------VKNKITTVLTET 296
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F +KRA KL Q +FL LL F++ GIHF+
Sbjct: 297 GFSDKRAGKLDQTDFLKLLYAFHQVGIHFA 326
>gi|58385178|ref|XP_313763.2| AGAP004465-PA [Anopheles gambiae str. PEST]
gi|55240843|gb|EAA09266.2| AGAP004465-PA [Anopheles gambiae str. PEST]
Length = 306
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 226/355 (63%), Gaps = 51/355 (14%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K+R EK + G+ GI F+K GQHILKNPL++ S+++KA ++ TDV+LEIG
Sbjct: 3 KVRAEKKSRVH-----DGVAKQGIVFNKDFGQHILKNPLVITSMLEKAALRPTDVVLEIG 57
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGN+T K+LE K V+A E+D+R+V ELQ+R Q T +L+++ GDVLKTDLP+FDI
Sbjct: 58 PGTGNMTVKILEKVKKVVACEIDTRLVAELQKRVQGTHMQPKLQILIGDVLKTDLPFFDI 117
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 118 CVANMPYQISSPFVFKLLLHRPFFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLAR 177
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V L+KVGKNNF+PPPKV+SSVVRIEPR P P +N EWDG RI F+RKNKTL++ F+
Sbjct: 178 VDMLMKVGKNNFKPPPKVESSVVRIEPRNPPPPINYTEWDGLTRIAFLRKNKTLAAAFKQ 237
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
VL+ LE N++ + SL N ++ D
Sbjct: 238 TTVLTTLEDNFKL--------HCSLKNIDVPADL-------------------------- 263
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+ V +L + +KRA + +F+ +L FN G HFS
Sbjct: 264 ------------NVKEMVEKILEKADASDKRARSMDIDDFMAVLQAFNAEGFHFS 306
>gi|225717560|gb|ACO14626.1| Probable dimethyladenosine transferase [Caligus clemensi]
Length = 313
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 172/335 (51%), Positives = 219/335 (65%), Gaps = 46/335 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
G G+ F+ S GQHILKNP +V+SI++K+G++ TD +LEIGPGTGNLT KLL+ K VI
Sbjct: 24 GRQGLMFNTSLGQHILKNPAVVDSIIEKSGLRPTDTVLEIGPGTGNLTAKLLDKVKRVIV 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
E+D RMV ELQ+RFQ +P+ +L+++ GD +KT+LP+FD+CVAN+PYQISSPL FKLL
Sbjct: 84 CEVDPRMVAELQKRFQHSPFKPKLEILVGDAIKTELPFFDVCVANVPYQISSPLVFKLLL 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCA++MFQ+EFAMRL+A PGDKLYCRLS+NTQL + V HLLKVG+NNFRPPPKV+
Sbjct: 144 HRPFFRCAVLMFQREFAMRLIAAPGDKLYCRLSINTQLLSTVHHLLKVGRNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIE + P P +N EWDG RICF+RKNKTL + F VL L+KNYRT +L
Sbjct: 204 SSVVRIEHKNPPPPINFKEWDGLTRICFVRKNKTLGAAFSQTPVLLTLDKNYRTHLSL-- 261
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
++EM ED K +
Sbjct: 262 ---------------------------------NEEMVPED-----------FSIKKLIE 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
VL F+EKRA + +F+ L FN G+HF
Sbjct: 278 EVLDSIDFKEKRARTMDIDDFMKLQHAFNSKGVHF 312
>gi|66810281|ref|XP_638864.1| dimethyladenosine transferase [Dictyostelium discoideum AX4]
gi|74854506|sp|Q54QK7.1|DIM1_DICDI RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=DIM1 dimethyladenosine transferase 1 homolog;
AltName: Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|60467487|gb|EAL65509.1| dimethyladenosine transferase [Dictyostelium discoideum AX4]
Length = 314
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/329 (53%), Positives = 228/329 (69%), Gaps = 44/329 (13%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
+KS GQH+LKNPL++++IV K+ +KSTD +LEIGPGTGNLT KLLE K VIA+E+D R
Sbjct: 29 MNKSYGQHLLKNPLIIDAIVDKSQLKSTDTVLEIGPGTGNLTMKLLENCKKVIAIEVDPR 88
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M ELQ+R ++PY+ L++I GD LK DLPYFD+CVAN+PYQISSPLTFKLL H+P FR
Sbjct: 89 MAAELQKRVAASPYAQHLQIILGDFLKVDLPYFDVCVANVPYQISSPLTFKLLAHRPIFR 148
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
A++MFQKEFA+RL A+PGD LYCRLSVNTQL ++V+HL+KVGKNNF PPPKV+S+VVRI
Sbjct: 149 TAVLMFQKEFALRLGAKPGDSLYCRLSVNTQLLSKVTHLMKVGKNNFLPPPKVESAVVRI 208
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EP P P +N VEWDG +++CF RKNKTLS IFR+ +V+ L +NY+T AL+ N+
Sbjct: 209 EPFNPPPPINFVEWDGLVKLCFSRKNKTLSGIFRVSSVIETLNQNYKTYCALEGKMNT-- 266
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
DGSD++M K+ ++ L +
Sbjct: 267 ------------------------DGSDEQM------------------KELIIKTLTDN 284
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
F + R+SKL +FL LL+ F++ GIHF
Sbjct: 285 DFLDSRSSKLDINDFLKLLNKFHETGIHF 313
>gi|157103251|ref|XP_001647892.1| dimethyladenosine transferase [Aedes aegypti]
gi|157126646|ref|XP_001654689.1| dimethyladenosine transferase [Aedes aegypti]
gi|108873212|gb|EAT37437.1| AAEL010575-PA [Aedes aegypti]
gi|108884724|gb|EAT48949.1| AAEL000076-PA [Aedes aegypti]
Length = 306
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 173/333 (51%), Positives = 218/333 (65%), Gaps = 46/333 (13%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+K GQHILKNPL+V S++ KAG++ TDV+LEIGPGTGN+T KLLE K V+A E+
Sbjct: 20 GIVFNKDFGQHILKNPLIVTSMLDKAGLRPTDVVLEIGPGTGNMTVKLLEKVKKVVACEI 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D R+V ELQ+R Q TP ++L+++ GDVLK DLP+FD CVAN+PYQISSP FKLL H+P
Sbjct: 80 DPRLVAELQKRVQGTPMQSKLQILIGDVLKADLPFFDCCVANMPYQISSPFVFKLLLHRP 139
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQ EFA RLVA+PGDKLYCRLSVNTQL ARV L+KVGKNNFRPPPKV+SSV
Sbjct: 140 FFRCAVLMFQLEFAQRLVAKPGDKLYCRLSVNTQLLARVDMLMKVGKNNFRPPPKVESSV 199
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEPR P P +N EWDG RI F+RKNKTL++ F+ +V++ LE+N++
Sbjct: 200 VRIEPRNPSPPINYTEWDGLTRIAFLRKNKTLAAAFKQTSVMTALEQNFK--------MQ 251
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
SL N ++ E K+KV +L
Sbjct: 252 CSLKNQDL--------------------------------------PEGFSIKEKVEGIL 273
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ KRA + +F+ +L FN GIHFS
Sbjct: 274 AKIDAGAKRARTMDIDDFMAVLHAFNSEGIHFS 306
>gi|242247433|ref|NP_001156188.1| dimethyladenosine transferase-like [Acyrthosiphon pisum]
gi|239790841|dbj|BAH71955.1| ACYPI005364 [Acyrthosiphon pisum]
Length = 303
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/354 (50%), Positives = 228/354 (64%), Gaps = 54/354 (15%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
K++KEKG G GI F K GQHILKNPL+++ +V+K+ + TD +LEIG
Sbjct: 3 KVKKEKG--------PSDYGRQGIMFKKDFGQHILKNPLIIQGMVEKSALLPTDTVLEIG 54
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGNLT KLLE K VIA E+D R+V EL++R +TPY N+L++ GDVLK++LP+F++
Sbjct: 55 PGTGNLTVKLLERVKTVIACEIDVRLVAELKKRVMNTPYQNKLQIRVGDVLKSELPFFNV 114
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
VANIPYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL AR
Sbjct: 115 LVANIPYQISSPLVFKLLLHRPFFRCAVLMFQREFAYRLVAKPGDKLYCRLSINTQLLAR 174
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
V ++KVGKNNFRPPPKV+S+VVRIEPR P P +N EWDG RI F RKNKTL +IF+
Sbjct: 175 VDLIMKVGKNNFRPPPKVESNVVRIEPRNPPPPINFNEWDGLTRIAFSRKNKTLGAIFKQ 234
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
V LEKNYR +L++ + +ED
Sbjct: 235 NAVAVTLEKNYRVYCSLKNQK------------------------------------IED 258
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
D + K K+ VL + F +KRA K+ EF+ LL F+K GIHF
Sbjct: 259 D----------FDIKQKLDDVLNKNDFCDKRARKMDIDEFIELLLAFHKEGIHF 302
>gi|126276136|ref|XP_001387199.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (18S rRNA
dimethylase) [Scheffersomyces stipitis CBS 6054]
gi|126213068|gb|EAZ63176.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (18S rRNA
dimethylase) [Scheffersomyces stipitis CBS 6054]
Length = 323
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 168/331 (50%), Positives = 223/331 (67%), Gaps = 40/331 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNPL+ + IV KAGIK +D++LE+GPGTGNLT ++LE + V+AVE+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAGIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPR 91
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KTDLPYFD+C++N PYQISSPL FKLL R
Sbjct: 92 MAAELTKRVHGTPQQKKLEILLGDFMKTDLPYFDVCISNTPYQISSPLVFKLLNQPRPPR 151
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFA+RL+A+PGD LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 152 VSILMFQREFALRLLARPGDGLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRI F+RKNKT+++ F+ NV+ +LEKNY+T
Sbjct: 212 EVKTPRPNIDFHEWDGLLRIVFVRKNKTIAAGFKSNNVIEILEKNYKTF----------- 260
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSE-FKDKVLAVLRE 328
L SN D +M VDD + ++E K+K+ VL E
Sbjct: 261 -----------LATSNTDDAMVVDD-----------------KASMTEVVKNKIDQVLTE 292
Query: 329 GQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F EKRASKL Q +FL LL F++ GIHF+
Sbjct: 293 TGFAEKRASKLDQTDFLKLLYAFHQVGIHFA 323
>gi|348667578|gb|EGZ07403.1| putative dimethyladenosine transferase [Phytophthora sojae]
Length = 312
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/338 (52%), Positives = 218/338 (64%), Gaps = 46/338 (13%)
Query: 22 GLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMV 81
LG + + + GQH LKNP++V IV KA I+ TDV LE+GPGTGNLT KLLE K V
Sbjct: 21 ALGRTLATPNTNLGQHFLKNPMIVTQIVAKAAIRGTDVCLEVGPGTGNLTVKLLEQAKRV 80
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKL 141
+AVE D RMV ELQ+R Q T + N L++I GDV++ LP+FD+CVAN+PYQISSP FKL
Sbjct: 81 VAVEFDPRMVAELQKRIQHTEHINHLQIIHGDVMRVQLPFFDVCVANLPYQISSPFVFKL 140
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L H+P FRCA++MFQ+EFA RL A+PGD+LYCRLSVNTQL A+V LLKVG+NNFRPPPK
Sbjct: 141 LAHRPMFRCAVVMFQEEFAKRLSAKPGDELYCRLSVNTQLLAKVDQLLKVGRNNFRPPPK 200
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL 261
V+S VVRIEPR P P VN EWDG ++I F RKNKTL S F K+VL +LE+NY+T
Sbjct: 201 VESRVVRIEPRNPPPPVNFTEWDGMIKIIFNRKNKTLHSCFVTKSVLKILEENYKTY--- 257
Query: 262 QSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDK 321
SL N E +GD D++ +V E
Sbjct: 258 -----CSLNN-------------------------------ELPEGDIDMKKKVEE---- 277
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VL +F EKR +K+ Q +FL LL FN IHFS
Sbjct: 278 ---VLAFEKFGEKRGAKMDQDDFLLLLERFNANKIHFS 312
>gi|50420303|ref|XP_458685.1| DEHA2D05038p [Debaryomyces hansenii CBS767]
gi|52782772|sp|Q6BSY5.1|DIM1_DEBHA RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49654352|emb|CAG86824.1| DEHA2D05038p [Debaryomyces hansenii CBS767]
Length = 327
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/330 (50%), Positives = 225/330 (68%), Gaps = 34/330 (10%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNPL+ + IV KAGIK +D++LE+GPGTGNLT ++LE + VIA E+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAGIKPSDIVLEVGPGTGNLTVRILEQARKVIASEMDPR 91
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L ++ GD +KT+LPYFD+C++N PYQISSPL FKLL R
Sbjct: 92 MAAELTKRVHGTPNQKKLDILLGDFIKTELPYFDVCISNTPYQISSPLVFKLLNQPRPPR 151
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H++KV KNNFRPPP+V+SSVVRI
Sbjct: 152 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVSKNNFRPPPQVESSVVRI 211
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRICF+RKNKT+++ F+ N+L +LEKNY+T S+ N++
Sbjct: 212 EVKVPRPNIDFNEWDGLLRICFVRKNKTIAAGFKSNNILDILEKNYKT---FLSTANAA- 267
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
+NGD SM VDD S +D+ K K+ VL E
Sbjct: 268 --------------ANGDDSMMVDDKS----------SMTDI------VKAKIEQVLTET 297
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F +KRA+KL Q +FL LL F++ G+HF+
Sbjct: 298 GFSDKRAAKLDQTDFLKLLYAFHQVGLHFA 327
>gi|391330956|ref|XP_003739917.1| PREDICTED: probable dimethyladenosine transferase-like [Metaseiulus
occidentalis]
Length = 319
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 156/261 (59%), Positives = 202/261 (77%), Gaps = 5/261 (1%)
Query: 3 GGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
GG ++K S Q L +F+ GQHILKNPL+++S+V+KA ++STDV+LE
Sbjct: 14 GGAMKKSTTGSGSTVTNSQQL-----TFNTGLGQHILKNPLVIQSMVEKAAVRSTDVVLE 68
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
IGPGTGN+T +LLE K V+A E+D RMV ELQ+R Q TP +L++I GDV++ DLP+F
Sbjct: 69 IGPGTGNMTVRLLEKAKKVVAFEVDPRMVAELQKRVQCTPLQQKLQIIVGDVIRNDLPFF 128
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+CVAN+PYQISSP FKLL H+P FRCAI+MFQKEFA RLVA+PGDK Y RLSVNTQL
Sbjct: 129 DLCVANMPYQISSPFVFKLLLHRPFFRCAILMFQKEFAQRLVAKPGDKFYSRLSVNTQLL 188
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
ARV ++KVGKNNFRPPPKV+S+V+R+EPR P P ++ WDG LR+CF+RKNKTL++ F
Sbjct: 189 ARVDIIMKVGKNNFRPPPKVESAVIRLEPRNPPPNIDYTSWDGLLRVCFVRKNKTLAAEF 248
Query: 243 RLKNVLSMLEKNYRTLQALQS 263
+VL MLEKNYR+L ++++
Sbjct: 249 TQGSVLQMLEKNYRSLASVKN 269
>gi|312371948|gb|EFR20006.1| hypothetical protein AND_20790 [Anopheles darlingi]
Length = 294
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/333 (51%), Positives = 221/333 (66%), Gaps = 46/333 (13%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+K GQHILKNPL++ S+++KA ++ TDV+LEIGPGTGN+T K+LE K V+A E+
Sbjct: 8 GIVFNKDFGQHILKNPLVITSMLEKAALRPTDVVLEIGPGTGNMTVKILEKVKKVVACEI 67
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D R+V ELQ+R Q T +L+++ GDVLKTDLP+FDICVAN+PYQISSP FKLL H+P
Sbjct: 68 DPRLVAELQKRVQGTHLQPKLQILIGDVLKTDLPFFDICVANMPYQISSPFVFKLLLHRP 127
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQ+EFA RLVA+PGDKLYCRLS+NTQL ARV L+KVGKNNF+PPPKV+SSV
Sbjct: 128 FFRCAVLMFQREFAQRLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFKPPPKVESSV 187
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEPR P P +N EWDG RI F+RKNKTL++ F+ VL+ LE NY+ +
Sbjct: 188 VRIEPRNPPPPINYTEWDGLTRIAFLRKNKTLAAAFKQTTVLTALEDNYKL--------H 239
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
SL N D P+ E++V K+KV +L
Sbjct: 240 CSLKN----IDVPA------------------ELNV----------------KEKVETIL 261
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ KRA + +F+ +L FN G HFS
Sbjct: 262 DRLEASSKRARSMDIDDFMAVLQAFNAEGFHFS 294
>gi|225709718|gb|ACO10705.1| Probable dimethyladenosine transferase [Caligus rogercresseyi]
Length = 313
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/335 (50%), Positives = 219/335 (65%), Gaps = 46/335 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
G G+ F+ + GQHILKNP +V+SI+ K+G++ TD +LEIGPGTGNLT KLL+ K VI
Sbjct: 24 GRQGLQFNTTLGQHILKNPAIVDSIIDKSGLRPTDTVLEIGPGTGNLTAKLLQVVKRVIV 83
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
+E+D RMV E+Q+RFQ +P+ +L+++ GD +KTDLP+FD+CVAN+PYQISSPL FKLL
Sbjct: 84 IEVDPRMVSEIQKRFQHSPHRPKLEILVGDAIKTDLPFFDVCVANVPYQISSPLVFKLLI 143
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FR AI+MFQ+EFA+RL+A PGDKL+CRLS+NTQL + V HLLKVG+NNFRPPPKV+
Sbjct: 144 HRPFFRAAILMFQREFALRLIAPPGDKLFCRLSINTQLLSTVHHLLKVGRNNFRPPPKVE 203
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIE + P P +N EWDG RICF+RKNKTL + F VL L+KNYRT +L+
Sbjct: 204 SSVVRIEHKNPPPPINFKEWDGLTRICFVRKNKTLGAAFSQTPVLMTLDKNYRTHLSLK- 262
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+EM E+ KD +
Sbjct: 263 ----------------------------------EEMVPEE-----------FSIKDLIE 277
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
VL F+EKR + +F+ LL FN GIHF
Sbjct: 278 EVLESIDFKEKRGRTMDIDDFMKLLHAFNAKGIHF 312
>gi|427777859|gb|JAA54381.1| Putative ribosomal rna adenine dimethylase [Rhipicephalus
pulchellus]
Length = 353
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 229/391 (58%), Gaps = 98/391 (25%)
Query: 19 QGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG 78
Q + + I+F GQHILKNPL++ +++K+ I+ TDV+LE+GPGTGN+T KLLE
Sbjct: 11 QHEVVQRQNIAFRTELGQHILKNPLVINGMIEKSAIRPTDVVLEVGPGTGNMTVKLLEKA 70
Query: 79 KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQ--------------------------- 111
K VIA E+D+R+V ELQ+R Q T ++L +I
Sbjct: 71 KKVIACEVDTRLVAELQKRVQGTHLHSKLHIIVXXXXXNMTVKLLEKAKKVIACEVDTRL 130
Query: 112 ---------------------GDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRC 150
GDVLK++LP+FDICVAN+PYQISSP FKLL H+P FRC
Sbjct: 131 VAELQKRVQGTHLHSKLHIIVGDVLKSELPFFDICVANLPYQISSPFVFKLLLHRPFFRC 190
Query: 151 AIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIE 210
A +MFQ+EFA RLVA+PGDKLYCRLSVNTQL ARV L+KVGKNNFRPPPKV+SSVVR+E
Sbjct: 191 ATLMFQREFAQRLVAKPGDKLYCRLSVNTQLLARVDILMKVGKNNFRPPPKVESSVVRLE 250
Query: 211 PRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLG 270
PR P P +N +EWDG LRICF+RKNKTLS+ F+ VL+MLEKNYR + S+
Sbjct: 251 PRNPPPAINFIEWDGLLRICFVRKNKTLSAAFKQTAVLAMLEKNYRV--------HCSVA 302
Query: 271 NTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEF--KDKVLAVLRE 328
N E+ SEF K+KV +L +
Sbjct: 303 NEELP----------------------------------------SEFNMKEKVDEILSQ 322
Query: 329 GQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
G + +KRA + +F+ LL LFN GIHFS
Sbjct: 323 GGYSDKRARTMDTDDFMALLHLFNTNGIHFS 353
>gi|346473505|gb|AEO36597.1| hypothetical protein [Amblyomma maculatum]
Length = 266
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 168/312 (53%), Positives = 210/312 (67%), Gaps = 46/312 (14%)
Query: 48 IVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRL 107
+++K+ I+ TDV+LE+GPGTGN+T KLLE K VIA E+D+R+V ELQ+R Q T ++L
Sbjct: 1 MIEKSAIRPTDVVLEVGPGTGNMTVKLLEKAKKVIACEVDTRLVAELQKRVQGTHLHSKL 60
Query: 108 KVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQP 167
+I GDVLK++LP+FDICVAN+PYQISSP FKLL H+P FRCA +MFQ+EFA RLVA+P
Sbjct: 61 HIIVGDVLKSELPFFDICVANLPYQISSPFVFKLLLHRPFFRCATLMFQREFAQRLVAKP 120
Query: 168 GDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL 227
GDKLYCRLSVNTQL ARV L+KVGKNNFRPPPKV+SSVVR+EPR P P +N +EWDG L
Sbjct: 121 GDKLYCRLSVNTQLLARVDILMKVGKNNFRPPPKVESSVVRLEPRNPPPAINFIEWDGLL 180
Query: 228 RICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGD 287
RICF+RKNKTLS+ F+ VL+MLEKN+R + S+ N E+
Sbjct: 181 RICFVRKNKTLSAAFKQTAVLAMLEKNFRV--------HCSVANEEL------------- 219
Query: 288 QSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYL 347
E KDKV +L+EG + EKRA + +F+ L
Sbjct: 220 -------------------------PEEFSMKDKVEEILKEGGYAEKRARTMDTDDFMAL 254
Query: 348 LSLFNKAGIHFS 359
L FN GIHFS
Sbjct: 255 LHQFNSNGIHFS 266
>gi|407929604|gb|EKG22416.1| Ribosomal RNA adenine methylase transferase [Macrophomina
phaseolina MS6]
Length = 379
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/349 (51%), Positives = 232/349 (66%), Gaps = 22/349 (6%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNP + ++IV KA +K +DV+LE+GPGTGNLT K+LE K VIAVE+D R
Sbjct: 34 FNTDLGQHILKNPGVAQAIVDKADLKQSDVVLEVGPGTGNLTVKILEKAKKVIAVEMDPR 93
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M E+ +R Q TP RL+VI GDV+KT LPYFD+C++N PYQISSPLTFKLL QPA R
Sbjct: 94 MAAEVTKRVQGTPAQKRLEVILGDVIKTQLPYFDVCISNTPYQISSPLTFKLLATQPAPR 153
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
I+MFQ+EFAMRL+A+PGDKLY R+SVN Q+ A+V H+LKVGKNNF PPP+V+SSVVRI
Sbjct: 154 TLILMFQREFAMRLLAKPGDKLYSRISVNCQMWAKVDHILKVGKNNFNPPPQVESSVVRI 213
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSS 268
P+ PRPQ++ EWDG LR+CF+RKNKTL SS F +V+ MLE NYRT A +
Sbjct: 214 VPKNPRPQISYDEWDGLLRVCFVRKNKTLRSSFFGTSSVMDMLEANYRTFCA---QNDIV 270
Query: 269 LGNTEIGTDTPSLGDS------NGDQSMG----------VDDGSDDEMDVEDDDGDSDVE 312
L ++ + + ++ NG + + ++ ++ +
Sbjct: 271 LDDSPLDPNDTTMEVEQEEEEWNGIDEDMDIEDEDIPEFFKEQAAEKAKLKKSATPRKKK 330
Query: 313 GEVSEF-KDKVLAVLR-EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
G+VSE ++KV VL E + EKRA + +FL LL FNK GIHFS
Sbjct: 331 GKVSELVREKVRKVLEDETELAEKRARMCEEGDFLKLLYAFNKEGIHFS 379
>gi|448525575|ref|XP_003869150.1| Dim1 18S rRNA dimethylase [Candida orthopsilosis Co 90-125]
gi|380353503|emb|CCG23013.1| Dim1 18S rRNA dimethylase [Candida orthopsilosis]
Length = 323
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/330 (51%), Positives = 225/330 (68%), Gaps = 38/330 (11%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + VIAVE+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVIAVEMDPR 91
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KTDLPYFDIC++N PYQISSPL FKLL R
Sbjct: 92 MGAELTKRVHGTPQEKKLEILLGDFIKTDLPYFDICISNTPYQISSPLVFKLLNQPRPPR 151
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRLVA+PGD+LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 152 VSILMFQREFAMRLVARPGDELYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRI F+RKNKT+++ F+ NV+ +LEKNY+T A Q
Sbjct: 212 EVKTPRPNIDFNEWDGLLRIVFVRKNKTIAAGFKSSNVIEILEKNYKTWLATQ------- 264
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
NGD SM VD+ +D++G + K+K+ VL E
Sbjct: 265 --------------ENGD-SMVVDN-------------KADLKGLI---KEKITKVLTET 293
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F ++RA KL Q +FL LL F++ GIHF+
Sbjct: 294 GFSDQRAGKLDQTDFLKLLYAFHQVGIHFA 323
>gi|301110310|ref|XP_002904235.1| dimethyladenosine transferase [Phytophthora infestans T30-4]
gi|262096361|gb|EEY54413.1| dimethyladenosine transferase [Phytophthora infestans T30-4]
Length = 312
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/338 (51%), Positives = 214/338 (63%), Gaps = 46/338 (13%)
Query: 22 GLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMV 81
LG + + + GQH LKNP++V IV KA I+ TDV LE+GPGTGNLT KLLE K V
Sbjct: 21 ALGRTLATPNTNLGQHFLKNPMIVTQIVAKAAIRGTDVCLEVGPGTGNLTVKLLEQAKRV 80
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKL 141
+AVE D RMV ELQ+R Q T + N L++I GDV++ LP+FD+CVAN+PYQISSP FKL
Sbjct: 81 VAVEFDPRMVAELQKRIQHTEHINHLQIIHGDVMRVQLPFFDVCVANLPYQISSPFVFKL 140
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L H+P FRCA++MFQ+EFA RL A+PGD+LYCRLSVNTQL A+V LLKVG+NNFRPPPK
Sbjct: 141 LAHRPMFRCAVVMFQEEFAKRLSAKPGDELYCRLSVNTQLLAKVDQLLKVGRNNFRPPPK 200
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL 261
V+S VVRIEPR P P VN EWDG ++I F RKNKTL S F K+VL +LE+NY+T +L
Sbjct: 201 VESRVVRIEPRNPPPPVNFTEWDGMIKIIFNRKNKTLHSCFVTKSVLKILEENYKTYCSL 260
Query: 262 QSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDK 321
N+ L ++I K K
Sbjct: 261 ----NNELPESDIA------------------------------------------MKKK 274
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
V VL F KR +K+ Q +FL LL FN IHFS
Sbjct: 275 VEEVLSFEDFGSKRGAKMDQDDFLLLLERFNANKIHFS 312
>gi|448122490|ref|XP_004204462.1| Piso0_000311 [Millerozyma farinosa CBS 7064]
gi|358350001|emb|CCE73280.1| Piso0_000311 [Millerozyma farinosa CBS 7064]
Length = 325
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/330 (50%), Positives = 224/330 (67%), Gaps = 35/330 (10%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNPL+ + IV KA +K +DV+LEIGPGTGNLT ++LE + VIA E+D R
Sbjct: 31 FNTNLGQHILKNPLVAQGIVDKANLKPSDVVLEIGPGTGNLTVRILEQARRVIASEMDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R + TP+ +L++I GD +K +LPYFD+C++N PYQISSPL FKLL R
Sbjct: 91 MAAELSKRVRGTPHEKKLEIILGDFIKAELPYFDVCISNTPYQISSPLVFKLLNSPRPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRLVA+PGD LYCRLS N Q+ A V+H++KVG+N+FRPPP+VDSSVVRI
Sbjct: 151 VSILMFQREFAMRLVARPGDSLYCRLSANVQMWANVTHIMKVGRNSFRPPPQVDSSVVRI 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRICF+RKNKT+++ F+ NV+ +LEKNY+ A S+ N S+
Sbjct: 211 EIKSPRPDIDFNEWDGLLRICFVRKNKTIAAGFKSNNVIDILEKNYK---AYLSATNQSM 267
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
S+GD EMD DV K K+ +VL E
Sbjct: 268 --------------SDGDM----------EMD--------DVPSMTELVKKKIESVLTET 295
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ +KRASKL Q +FL LL F++ G+HF+
Sbjct: 296 GYSDKRASKLDQTDFLKLLYAFHQVGLHFA 325
>gi|344302294|gb|EGW32599.1| Dimethyladenosine transferase [Spathaspora passalidarum NRRL
Y-27907]
Length = 319
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 164/330 (49%), Positives = 220/330 (66%), Gaps = 42/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNPL+ + IV KA I+ +DV+LE+GPGTGNLT ++LE K VIAVE+D R
Sbjct: 32 FNTNLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILEQAKKVIAVEMDPR 91
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KT+LPYFDIC++N PYQISSPL FKLL R
Sbjct: 92 MAAELTKRVHGTPQQKKLEILLGDFMKTELPYFDICISNTPYQISSPLVFKLLNQPRPPR 151
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFA+RL+A+PGD LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 152 VSILMFQREFALRLLARPGDALYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRICF+RKNKT+++ F+ NV+ +LEKNY+T A ++
Sbjct: 212 EIKNPRPNIDFNEWDGLLRICFVRKNKTIAAGFKSSNVIEILEKNYKTYLATTNTM---- 267
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
++D+ +DV K K+ VL E
Sbjct: 268 --------------------------------IDDNANMTDV------VKQKIETVLTET 289
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+F +KRASKL Q +FL LL F++ GIHF+
Sbjct: 290 EFSDKRASKLDQTDFLKLLYAFHQVGIHFA 319
>gi|255728801|ref|XP_002549326.1| dimethyladenosine transferase [Candida tropicalis MYA-3404]
gi|240133642|gb|EER33198.1| dimethyladenosine transferase [Candida tropicalis MYA-3404]
Length = 324
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 171/360 (47%), Positives = 230/360 (63%), Gaps = 41/360 (11%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGGIS----FHKSKGQHILKNPLLVESIVQKAGIKSTDV 59
GK K+K S P + ++ F+ + GQHILKNPL+ + IV KA I+ +DV
Sbjct: 2 GKAPKKKFSTSSDPTSKKVAAEKHLNSVFKFNTNLGQHILKNPLVAQGIVDKAQIRPSDV 61
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LE+GPGTGNLT ++LE + V+AVE+D RM EL +R TP +L+++ GD +KT+L
Sbjct: 62 VLEVGPGTGNLTVRILEKARKVVAVEMDPRMAAELTKRVHGTPQEKKLEILLGDFMKTEL 121
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFDIC++N PYQISSPL FKLL R +I+MFQ+EFA RLVA+PG++LYCRLS N
Sbjct: 122 PYFDICISNTPYQISSPLVFKLLNQPRPPRVSILMFQREFAQRLVARPGEELYCRLSANV 181
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
Q+ A V+H++KVGKNNFRPPP+V+SSVVRIE + PRP V+ EWDG LRICF+RKNKT++
Sbjct: 182 QMWANVTHIMKVGKNNFRPPPQVESSVVRIEVKNPRPNVDFNEWDGLLRICFVRKNKTIA 241
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
+ F+ NV+ +LEKNY+T A Q + D M VDD +
Sbjct: 242 AGFKSNNVIDILEKNYKTFLATQEN----------------------DGMMDVDDKNSSL 279
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DV K+K+ VL E F +KR+ K+ Q +FL LL F++ GIHF+
Sbjct: 280 KDV---------------VKEKITKVLTETGFADKRSGKMDQVDFLKLLYAFHQVGIHFA 324
>gi|149239484|ref|XP_001525618.1| dimethyladenosine transferase [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451111|gb|EDK45367.1| dimethyladenosine transferase [Lodderomyces elongisporus NRRL
YB-4239]
Length = 329
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 176/362 (48%), Positives = 232/362 (64%), Gaps = 40/362 (11%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGG-----ISFHKSKGQHILKNPLLVESIVQKAGIKSTD 58
GK +K KS P G + A F+ + GQHILKNPL+ + IV KA I+ +D
Sbjct: 2 GKAPNKKFSSKSNP-TGATVAADKHLNSVFKFNTNLGQHILKNPLVAQGIVDKAQIRPSD 60
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
V+LE+GPGTGNLT ++LE + VIA E+D RM EL +R TP +L+++ GD +KT+
Sbjct: 61 VVLEVGPGTGNLTVRILEQARKVIASEMDPRMAAELTKRVHGTPQEKKLEILLGDFMKTE 120
Query: 119 LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVN 178
LPYFDIC++N PYQISSPL FKLL R +I+MFQ+EFAMRLVA+PGD+LYCRLS N
Sbjct: 121 LPYFDICISNTPYQISSPLVFKLLNQPNPPRVSILMFQREFAMRLVARPGDELYCRLSAN 180
Query: 179 TQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
Q+ A V+H++KVGKNNFRPPPKV+SSVVRIE + PRP ++ EWDG LRI F+RKNKT+
Sbjct: 181 VQMWANVTHIMKVGKNNFRPPPKVESSVVRIEIKNPRPNIDFNEWDGLLRIVFVRKNKTI 240
Query: 239 SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDD 298
++ F+ NV+ +LEKNY+T A Q+ G++ +D
Sbjct: 241 AAGFKSLNVIDILEKNYKTWLATQA---------------------------GIEGLQED 273
Query: 299 E-MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIH 357
M V+D G DV K K+ VL E F +KRA KL Q +FL LL F++ G+H
Sbjct: 274 ATMIVDDKAGLKDV------VKQKIEKVLTETGFSDKRAGKLDQTDFLKLLYAFHQVGLH 327
Query: 358 FS 359
F+
Sbjct: 328 FA 329
>gi|67464821|ref|XP_648602.1| dimethyladenosine transferase [Entamoeba histolytica HM-1:IMSS]
gi|56464806|gb|EAL43214.1| dimethyladenosine transferase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407044216|gb|EKE42449.1| dimethyladenosine transferase [Entamoeba nuttalli P19]
gi|449709002|gb|EMD48354.1| dimethyladenosine transferase, putative [Entamoeba histolytica
KU27]
Length = 295
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 170/340 (50%), Positives = 223/340 (65%), Gaps = 46/340 (13%)
Query: 20 GQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGK 79
+ +G FHKS+GQHILKNP++ + IV A ++ TDV+LEIGPGTGNLT K+L K
Sbjct: 2 AEPVGTNIFQFHKSEGQHILKNPMIAQQIVDAAELRRTDVVLEIGPGTGNLTMKMLPFCK 61
Query: 80 MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTF 139
+IA+E+D RM EL++R T Y +L++IQGD LK +LPYFD+CV+N PY ISSPL F
Sbjct: 62 KLIAIEIDPRMAAELKKRVSVTDYVKKLEIIQGDFLKVELPYFDVCVSNTPYSISSPLVF 121
Query: 140 KLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
KLL H+P FR A++MFQ+EFAMRLVA+PGD LYCRLSVNTQL A V H++KVG+NNF+PP
Sbjct: 122 KLLNHRPQFRSAVLMFQREFAMRLVAKPGDPLYCRLSVNTQLLADVFHVMKVGRNNFKPP 181
Query: 200 PKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQ 259
PKV+SSVVR+ P KP P +N VE+DGFLRICF+RK+KTLSS+FR+ +VL ++EKN R +
Sbjct: 182 PKVESSVVRMIPVKPAPPLNLVEFDGFLRICFLRKHKTLSSLFRISSVLEVMEKNLRII- 240
Query: 260 ALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFK 319
+ + N I D+ +DV+ D
Sbjct: 241 -------AKIRNIPI----------------------DENLDVKAD-------------- 257
Query: 320 DKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VL +L E + RA++LT +FL L+ F K HF
Sbjct: 258 --VLQILEESGRAKSRAAQLTLDDFLELIYAFMKKNYHFC 295
>gi|281204745|gb|EFA78940.1| dimethyladenosine transferase [Polysphondylium pallidum PN500]
Length = 306
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/338 (50%), Positives = 226/338 (66%), Gaps = 44/338 (13%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K+KG +K + + + +K+ GQH+LKNPL++++IV K+ +KSTD +LEIGPGT
Sbjct: 10 KDKGAEKGADDKQKVVRHHEFQMNKTFGQHLLKNPLIIDAIVDKSQLKSTDTVLEIGPGT 69
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GNLT KLLE+ K VIAVE+D RM ELQ+R +TPY++ L++I GD LK DLPYFD+CVA
Sbjct: 70 GNLTMKLLESCKKVIAVEVDPRMAAELQKRVATTPYASHLEIILGDFLKVDLPYFDVCVA 129
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PYQISSPLTFKLL H+P FR A++MFQKEFA+RL A PGD LYCRLSVNTQL ++V+H
Sbjct: 130 NVPYQISSPLTFKLLAHRPVFRTAVLMFQKEFALRLAASPGDSLYCRLSVNTQLLSKVTH 189
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
L+KVGKNNF PPPKV+S+VV+I+P P P +N +EWDG +++CF RKNKTL +IF++ +V
Sbjct: 190 LMKVGKNNFLPPPKVESAVVKIQPFNPPPPINFIEWDGLIKLCFSRKNKTLPAIFKVNSV 249
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
+ ML +NY+T AL+ G
Sbjct: 250 IEMLNQNYKTYCALE--------------------------------------------G 265
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFL 345
D +G KDKV+ VL + F + R++K+ EFL
Sbjct: 266 KMDTDGTEESMKDKVIQVLEKNNFSDFRSAKMDINEFL 303
>gi|325093055|gb|EGC46365.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
capsulatus H88]
Length = 384
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 184/355 (51%), Positives = 231/355 (65%), Gaps = 39/355 (10%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQH+LKNP + ++IV KA +K +D +LEIGPGTGNLT K+LE K VIAVELD RM E+
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEV 98
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P RL+V+ GDV+KTDLPYFD+C++N PYQISSPLTFKLL PA R I+M
Sbjct: 99 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATNPAPRVCILM 158
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMRL A+PGDKLY RLSVN Q+ AR+ H++KVGKNNF+PPP V+SSVVRI P+ P
Sbjct: 159 FQREFAMRLFAKPGDKLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNP 218
Query: 215 RPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
RPQ++ EWDG LR+ F+RKNKT+ SS +VL+MLE NYRT A QN N
Sbjct: 219 RPQISYDEWDGLLRVAFVRKNKTMRSSFLGTTSVLNMLESNYRTWCA----QN----NIP 270
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDE-----MDVEDDDGD-----SDVE----------- 312
+ D P+ + + D G +E MD++DD GD +D E
Sbjct: 271 V-EDGPAEEPEDKSVNTIEDPGEQEEELGSAMDIDDDGGDVPEFFADEEPKLNLNASKEN 329
Query: 313 ------GEVSEF-KDKVLAVLR-EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
G+V E ++KV VL E +KRA + EFL LL FN+ GIHFS
Sbjct: 330 PARKRKGKVRELVREKVRQVLEDETGLADKRARMCDEGEFLKLLWAFNQKGIHFS 384
>gi|448124804|ref|XP_004205020.1| Piso0_000311 [Millerozyma farinosa CBS 7064]
gi|358249653|emb|CCE72719.1| Piso0_000311 [Millerozyma farinosa CBS 7064]
Length = 325
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 167/330 (50%), Positives = 223/330 (67%), Gaps = 35/330 (10%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNPL+ + IV KA +K +D++LEIGPGTGNLT ++LE + VIA E+D R
Sbjct: 31 FNTNLGQHILKNPLVAQGIVDKANLKPSDIVLEIGPGTGNLTVRILEQARRVIASEMDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R + TP+ +L++I GD +K +LPYFD+C++N PYQISSPL FKLL R
Sbjct: 91 MAAELSKRVRGTPHEKKLEIILGDFIKAELPYFDVCISNTPYQISSPLVFKLLNQPRPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRLVA+PGD LYCRLS N Q+ A V+H++KVG+N+FRPPP+VDSSVVRI
Sbjct: 151 VSILMFQREFAMRLVARPGDSLYCRLSANVQMWANVTHIMKVGRNSFRPPPQVDSSVVRI 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRICF+RKNKT+++ F+ NV+ +LEKNY+ A S+ N S
Sbjct: 211 EIKSPRPDIDFNEWDGLLRICFVRKNKTIAAGFKSNNVIDILEKNYK---AYLSATNQS- 266
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
S+GD M DD S E K K+ +VL E
Sbjct: 267 -------------TSDGDMEM--------------DDAPSMTE----LVKKKIESVLTET 295
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ +KRASKL Q +FL LL F++ G+HF+
Sbjct: 296 GYSDKRASKLDQTDFLKLLYAFHQVGLHFA 325
>gi|225563099|gb|EEH11378.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
capsulatus G186AR]
gi|240279925|gb|EER43430.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
capsulatus H143]
Length = 384
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/355 (51%), Positives = 230/355 (64%), Gaps = 39/355 (10%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQH+LKNP + ++IV KA +K +D +LEIGPGTGNLT K+LE K VIAVELD RM E+
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEV 98
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P RL+V+ GDV+KTDLPYFD+C++N PYQISSPLTFKLL PA R I+M
Sbjct: 99 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATNPAPRVCILM 158
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMRL A+PGDKLY RLSVN Q+ AR+ H++KVGKNNF+PPP V+SSVVRI P+ P
Sbjct: 159 FQREFAMRLFAKPGDKLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNP 218
Query: 215 RPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
RPQ++ EWDG LR+ F+RKNKT+ SS +VL MLE NYRT A QN N
Sbjct: 219 RPQISYDEWDGLLRVAFVRKNKTMRSSFLGTTSVLDMLESNYRTWCA----QN----NIP 270
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDE-----MDVEDDDGD-----SDVE----------- 312
+ D P+ + + D G +E MD++DD GD +D E
Sbjct: 271 V-EDGPAEEPEDKSVNTIEDPGEQEEELGSAMDIDDDGGDVPEFFADEEPKLNLNASKEN 329
Query: 313 ------GEVSEF-KDKVLAVLR-EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
G+V E ++KV VL E +KRA + EFL LL FN+ GIHFS
Sbjct: 330 PARKRKGKVRELVREKVRQVLEDETGLADKRARMCDEGEFLKLLWAFNQKGIHFS 384
>gi|325179921|emb|CCA14323.1| dimethyladenosine transferase putative [Albugo laibachii Nc14]
Length = 311
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/338 (50%), Positives = 216/338 (63%), Gaps = 47/338 (13%)
Query: 22 GLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMV 81
LG + + S GQH LKNP++ IV KA ++STDV LE+GPGTGNLT K+L K V
Sbjct: 21 SLGRTLANPNTSIGQHFLKNPMIAAQIVSKAALRSTDVCLEVGPGTGNLTMKILNQAKKV 80
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKL 141
IAVE D RM+ E+Q+R Q+T ++ L+VI GDV++ LP+FD+C+AN+PYQISSP FKL
Sbjct: 81 IAVEYDLRMIAEIQKRVQNTEHAKHLQVIHGDVIRVQLPFFDVCIANLPYQISSPFVFKL 140
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L H+P FRCA++MFQ+EFA RL A+PGD+LYCRLSVNTQL A+V L+KVGKNNFRPPPK
Sbjct: 141 LAHRPMFRCAVVMFQEEFAKRLSAKPGDQLYCRLSVNTQLLAKVDQLIKVGKNNFRPPPK 200
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL 261
V+S VVRIEPR P P VN VEWDG ++I F RKNKTL + F K VL MLE NY+T +L
Sbjct: 201 VESRVVRIEPRNPPPPVNFVEWDGMIKILFNRKNKTLRACFLTKPVLKMLEDNYKTFCSL 260
Query: 262 QSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDK 321
E + D D+ K K
Sbjct: 261 HE---------------------------------------ELPESDFDI-------KKK 274
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ AVL + F +KRASK+ Q + L LL FN + IHF+
Sbjct: 275 IEAVLSDD-FSDKRASKMDQDDLLRLLERFNSSKIHFT 311
>gi|194388854|dbj|BAG61444.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 184/219 (84%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 25 AGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVAC 84
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H
Sbjct: 85 ELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLH 144
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+S
Sbjct: 145 RPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVES 204
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
SVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+
Sbjct: 205 SVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFK 243
>gi|328866316|gb|EGG14701.1| dimethyladenosine transferase [Dictyostelium fasciculatum]
Length = 319
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/329 (51%), Positives = 227/329 (68%), Gaps = 45/329 (13%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
+K+ GQH+LKNPL++++IV+KA +KSTD +LEIGPGTGNLT KLLE+ K VIAVE+D R
Sbjct: 35 MNKAYGQHLLKNPLIIDAIVEKAQLKSTDTVLEIGPGTGNLTMKLLESCKKVIAVEVDPR 94
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R +TPY++ L++I GD LK DLPYFD+CVAN+PYQISSPLTFKLL H+P FR
Sbjct: 95 MAAELHKRVSTTPYASHLQIILGDFLKADLPYFDVCVANVPYQISSPLTFKLLAHRPVFR 154
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
A++MFQ EFA RL A+PGD LYCRLSVNTQL +V+ L+ VGKNNF PPPKV+S+VVRI
Sbjct: 155 SAVLMFQLEFAARLAARPGDSLYCRLSVNTQLLGKVTKLMNVGKNNFLPPPKVESAVVRI 214
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
+P P P +N VEWDG +++CF RKNKT+++IF+ +V+ ML +NY+T+ +L+
Sbjct: 215 QPFNPPPPINFVEWDGLVKLCFSRKNKTIAAIFKTNSVIEMLYQNYKTVCSLK------- 267
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
G +IGT+ + K KV+A+L
Sbjct: 268 GIADIGTE--------------------------------------EDMKAKVVAILETN 289
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+F ++R+SKL EFL LL+ F++ +HF
Sbjct: 290 KFNDQRSSKLDINEFLRLLNCFHENDLHF 318
>gi|452981670|gb|EME81430.1| hypothetical protein MYCFIDRAFT_155610 [Pseudocercospora fijiensis
CIRAD86]
Length = 383
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/389 (46%), Positives = 241/389 (61%), Gaps = 48/389 (12%)
Query: 7 RKEKGKQKSGPYQG---QGLGAGGIS-----FHKSKGQHILKNPLLVESIVQKAGIKSTD 58
+ G KS PY G + AG I + GQHILKNP + ++IV KA +K +D
Sbjct: 7 KNSNGITKSDPYAGASSRKAKAGAIKNNVFRMNTDLGQHILKNPGVAQAIVDKADVKQSD 66
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
V+LEIGPGTGNLT ++LE K V+AVE+D RM E+ +RFQ TP + RL +I GDV+K +
Sbjct: 67 VVLEIGPGTGNLTARILEKAKKVVAVEMDPRMASEITKRFQGTPAAKRLDLILGDVIKME 126
Query: 119 -LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
LPYFD+C++N PYQISSPLTFKLL P+ R ++MFQ+EFAMRL A+PGDKLY RLSV
Sbjct: 127 KLPYFDVCISNTPYQISSPLTFKLLATSPSPRSCVLMFQREFAMRLFAKPGDKLYSRLSV 186
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKT 237
N Q+ A+V H++KVGKNNF PPP+V+S+VVRI P+ PRPQ++ EWDG LR+CF+RKN+
Sbjct: 187 NCQMWAKVDHVMKVGKNNFNPPPQVESNVVRISPKNPRPQISYDEWDGLLRVCFVRKNRV 246
Query: 238 LSSIFRLKN-VLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGS 296
L S F N V++MLE NYRT A QN +I D L GD+ M VD +
Sbjct: 247 LRSAFIGTNTVMAMLESNYRTFCA----QN------DIPLDEGPL--EGGDEDMDVDAAA 294
Query: 297 DD-------------------------EMDVEDDDGDSDVEGEVSEF-KDKVLAVLREGQ 330
++ + D+ + +G+V+E + KV VL E
Sbjct: 295 ENEEEDIMMDMDEDDDLPDFFKEEAEKKAKKLADNPNRKRKGKVAELVRSKVKKVLEENN 354
Query: 331 FEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
EKRA + +FL +L FN+ GIHF+
Sbjct: 355 LAEKRARMCDEGDFLKMLYGFNQEGIHFA 383
>gi|392863543|gb|EAS35700.2| dimethyladenosine transferase [Coccidioides immitis RS]
Length = 379
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/391 (48%), Positives = 242/391 (61%), Gaps = 44/391 (11%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGIS----FHKSKGQHILKNPLLVESIVQKAGIKS 56
M +K G K+GPY + + GQH+LKNP + ++IV KA +K
Sbjct: 1 MPKASHKKRNGASKAGPYAQAAAKTSAANSIFRMNTDIGQHVLKNPGVAQAIVDKADLKQ 60
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
+DV+LE+GPG+GNLT K+LE K VIAVELD RM E+ +R Q P RL+V+ GDV+K
Sbjct: 61 SDVVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEVTKRVQGKPEQKRLEVLLGDVIK 120
Query: 117 TDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS 176
TDLPYFD+C++N PYQISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLS
Sbjct: 121 TDLPYFDVCISNTPYQISSPLTFKLLATTPAPRVCILMFQREFAMRLFAKPGDKLYSRLS 180
Query: 177 VNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNK 236
VN Q+ A++ H++KVGKNNF+PPP V+SSVVRI P+ PRP ++ EWDG LRI F+RKNK
Sbjct: 181 VNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKTPRPDISYDEWDGLLRIAFVRKNK 240
Query: 237 TL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVD-- 293
TL SS +VLSMLE NY T A QN E+G D D D+ M ++
Sbjct: 241 TLRSSFLGTSSVLSMLESNYTTWCA----QNDI--PVEVGPD-----DDVEDEGMDIEYG 289
Query: 294 ---DGSDDEMDVEDDDGD--------------------SDVEGEVSEF-KDKVLAVLREG 329
DG D+ MDV DD+GD + G+V++ + KV VL +
Sbjct: 290 QENDGFDELMDV-DDEGDIPDFFKDKPDPTTQVPKTKPTKKHGKVAKLVRKKVRQVLEDD 348
Query: 330 Q-FEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA + +FL LL FN+ GIHF+
Sbjct: 349 TGLADKRARMCDEGDFLKLLWSFNQRGIHFN 379
>gi|303312255|ref|XP_003066139.1| dimethyladenosine transferase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105801|gb|EER23994.1| dimethyladenosine transferase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320040136|gb|EFW22070.1| dimethyladenosine transferase [Coccidioides posadasii str.
Silveira]
Length = 379
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/391 (48%), Positives = 242/391 (61%), Gaps = 44/391 (11%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGIS----FHKSKGQHILKNPLLVESIVQKAGIKS 56
M +K G K+GPY + + GQH+LKNP + ++IV KA +K
Sbjct: 1 MPKASHKKRNGASKAGPYAQAAAKTSAANSIFRMNTDIGQHVLKNPGVAQAIVDKADLKQ 60
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
+DV+LE+GPG+GNLT K+LE K VIAVELD RM E+ +R Q P RL+V+ GDV+K
Sbjct: 61 SDVVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEVTKRVQGKPEQKRLEVLLGDVIK 120
Query: 117 TDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS 176
TDLPYFD+C++N PYQISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLS
Sbjct: 121 TDLPYFDVCISNTPYQISSPLTFKLLATTPAPRVCILMFQREFAMRLFAKPGDKLYSRLS 180
Query: 177 VNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNK 236
VN Q+ A++ H++KVGKNNF+PPP V+SSVVRI P+ PRP ++ EWDG LRI F+RKNK
Sbjct: 181 VNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKTPRPDISYDEWDGLLRIAFVRKNK 240
Query: 237 TL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVD-- 293
TL SS +VLSMLE NY T A QN E+G D D D+ M ++
Sbjct: 241 TLRSSFLGTSSVLSMLESNYTTWCA----QNDI--PVEVGPD-----DDVEDEGMDIEYG 289
Query: 294 ---DGSDDEMDVEDDDGD--------------------SDVEGEVSEF-KDKVLAVLREG 329
DG D+ MDV DD+GD + G+V++ + KV VL +
Sbjct: 290 QENDGFDELMDV-DDEGDIPDFFKDKPDPTTQVPKTKPTKKHGKVAKLVRGKVRQVLEDD 348
Query: 330 Q-FEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA + +FL LL FN+ GIHF+
Sbjct: 349 TGLADKRARMCDEGDFLKLLWSFNQRGIHFN 379
>gi|255948106|ref|XP_002564820.1| Pc22g08040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591837|emb|CAP98092.1| Pc22g08040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 386
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/350 (50%), Positives = 230/350 (65%), Gaps = 26/350 (7%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQH+LKNP + +IV+KA +K +DV+LEIGPGTGNLT K+LE K IAVELD RM E+
Sbjct: 38 GQHVLKNPGIAAAIVEKAELKQSDVVLEIGPGTGNLTAKILEKAKKCIAVELDPRMAAEV 97
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+RFQSTPY RL+VI GDV+KT+LPYFD+C++N PYQISSPLTFKLL PA R I+M
Sbjct: 98 TKRFQSTPYQKRLEVILGDVMKTELPYFDVCISNTPYQISSPLTFKLLATSPAPRSCILM 157
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RL A+PGDKLY RLSVN Q+ A++ H++KVGKNNF+PPP+V+SSV+R+ P+ P
Sbjct: 158 FQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPQVESSVIRMVPKNP 217
Query: 215 RPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
RPQVN EWDG LRI F+RKNKTL SS +++ +LE NYRT A Q+ G E
Sbjct: 218 RPQVNYEEWDGLLRIVFVRKNKTLRSSFIGTSSIMELLEANYRTWCA-QNDIPVEDGPVE 276
Query: 274 IGTDTPSLGDSNGDQSMG---------------------VDDGSDDEMDVEDDDGDS-DV 311
+ D D +Q G + ++ ++ +G S
Sbjct: 277 VANDDAMAMDMGEEQEEGQAAEEPVDEVMDMDDDDVPDFFKETTNARLEAALKNGASRKK 336
Query: 312 EGEVSEF-KDKVLAVLREGQ-FEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
G+V+E ++KV VL + EKRA + +FL LL FN+ GIHF+
Sbjct: 337 RGKVAELVREKVRQVLDDDTGLGEKRARMCDENDFLKLLWAFNQKGIHFN 386
>gi|449270344|gb|EMC81029.1| putative dimethyladenosine transferase, partial [Columba livia]
Length = 281
Score = 330 bits (846), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 163/279 (58%), Positives = 207/279 (74%), Gaps = 15/279 (5%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+V SI++KA ++ TDV+LE+GPGTGNLT K+LE K VIA E+D R
Sbjct: 2 FNTGAGQHILKNPLVVNSIIEKAALRRTDVVLEVGPGTGNLTVKMLEKVKKVIACEIDPR 61
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
+V ELQ+R Q T +N+L++ GDVLK+DLP+FD CVAN+PYQISSP FKLL H+P FR
Sbjct: 62 LVGELQKRVQGTCLANKLEIKVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPFFR 121
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
CAI+MFQ+EFA+RLVA+PG KLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SSVVRI
Sbjct: 122 CAILMFQREFALRLVAKPGTKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRI 181
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +L+ NYR + SL
Sbjct: 182 EPKNPPPPINFQEWDGLVRIAFVRKNKTLSAAFKSSAVEQLLDHNYRI--------HCSL 233
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDE----MDVED 304
NTEI + S Q++ + G ++ MD++D
Sbjct: 234 HNTEIPEN---FKISEKIQTVLKNTGYSEKRARSMDIDD 269
>gi|367005092|ref|XP_003687278.1| hypothetical protein TPHA_0J00200 [Tetrapisispora phaffii CBS 4417]
gi|357525582|emb|CCE64844.1| hypothetical protein TPHA_0J00200 [Tetrapisispora phaffii CBS 4417]
Length = 319
Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 162/330 (49%), Positives = 218/330 (66%), Gaps = 41/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KAGI+ +D++LE+GPGTGNLT ++LE + V+AVE+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAGIQPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L ++ GD +KTDLPYFDIC++N PYQISSPL FKL+ R
Sbjct: 91 MAAELTKRVHGTPGEKKLDILLGDFMKTDLPYFDICISNTPYQISSPLVFKLINQPKPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFA+RL+A+PGD LYCRLS N Q+ A V+H++KVG+NNFRPPP+V+SSVVRI
Sbjct: 151 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRPQV+ EWDG LRI F+RKN+T+++ F+ VL +LEKNY+T A+
Sbjct: 211 EIKNPRPQVDFNEWDGLLRILFVRKNRTIAAGFKSSTVLEILEKNYKTYLAM-------- 262
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
N EI VDD +++ K+K+ VLRE
Sbjct: 263 -NNEI-----------------VDDTKSSMLEI---------------VKEKITTVLRET 289
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ E+R+ K Q +FL LL F++ GIHFS
Sbjct: 290 EMSERRSGKCDQTDFLRLLYAFHQVGIHFS 319
>gi|405961094|gb|EKC26948.1| Putative dimethyladenosine transferase [Crassostrea gigas]
Length = 289
Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/327 (51%), Positives = 213/327 (65%), Gaps = 48/327 (14%)
Query: 35 GQHILKNPLLVE--SIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVL 92
G +NP L + + + + ++ TDV+LE+GPGTGN+T KLLE K VIA E+D R+
Sbjct: 9 GAKWAENPWLAKMGNSLLLSALRPTDVVLEVGPGTGNMTMKLLEKTKKVIACEIDPRLAA 68
Query: 93 ELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAI 152
ELQ+R Q TP+ +L +I GDVL+TDLP+FDICVAN+PYQISSP FKLL H+P FRCA+
Sbjct: 69 ELQKRVQGTPFQTKLHLIVGDVLRTDLPFFDICVANLPYQISSPFVFKLLLHRPFFRCAV 128
Query: 153 IMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR 212
+MFQ+EFA RLVA+PGDKLYCRLSVNTQL ARV HL+KV KNNFRPPPKV+SSVVRIEPR
Sbjct: 129 LMFQREFAQRLVAKPGDKLYCRLSVNTQLLARVDHLMKVSKNNFRPPPKVESSVVRIEPR 188
Query: 213 KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNT 272
P P +N EWDG +RICF RKNKT+ + F+ VL +LEKNYRT +L+S +
Sbjct: 189 NPPPPINFQEWDGLVRICFSRKNKTIGASFKYTKVLELLEKNYRTHCSLKSVPVAP---- 244
Query: 273 EIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFE 332
D DV+ +V+E +L +G FE
Sbjct: 245 -----------------------------------DFDVKAKVTE-------ILEKGDFE 262
Query: 333 EKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA + +FL LL+ FN G HFS
Sbjct: 263 KKRARTMDIDDFLGLLNCFNGEGFHFS 289
>gi|328774301|gb|EGF84338.1| hypothetical protein BATDEDRAFT_22291 [Batrachochytrium
dendrobatidis JAM81]
Length = 306
Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 174/335 (51%), Positives = 212/335 (63%), Gaps = 46/335 (13%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
G F KS GQHILKNPL+V IV KA IK+TDV+LE+GPGTGN+T K+LE K I V
Sbjct: 16 TAGPLFDKSLGQHILKNPLVVNGIVDKACIKATDVVLEVGPGTGNVTVKILEKAKKTIVV 75
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E+D R+ EL +R + T +L+VI GD LK DLPYFDIC++N PYQISS LTFKLL H
Sbjct: 76 EMDPRLAAELTKRVRGTAEQRKLEVIVGDFLKVDLPYFDICISNTPYQISSSLTFKLLQH 135
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P +RC+I+MFQ+EFA+RLVA+PGD LYCRLS N QL A+V H++KVGKNNFRPPPKV+S
Sbjct: 136 RPLWRCSILMFQREFALRLVAKPGDALYCRLSANVQLLAKVDHVMKVGKNNFRPPPKVES 195
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
SVVRIEP P P VN EWDG LRI F RKN+T+++ F+ VL MLE NY+T +L
Sbjct: 196 SVVRIEPHNPPPPVNFDEWDGLLRILFGRKNRTVAANFKTSTVLEMLEHNYKTYCSLT-- 253
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
G D P D DV K +VL
Sbjct: 254 ----------GKDIPM---------------------------DFDV-------KAQVLG 269
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VL E RA+K+ +FL LLS+F AG F+
Sbjct: 270 VLDAAGMAEHRAAKMDNDDFLKLLSMFIDAGFRFT 304
>gi|254568850|ref|XP_002491535.1| Essential 18S rRNA dimethylase (dimethyladenosine transferase)
[Komagataella pastoris GS115]
gi|238031332|emb|CAY69255.1| Essential 18S rRNA dimethylase (dimethyladenosine transferase)
[Komagataella pastoris GS115]
gi|328351956|emb|CCA38355.1| dimethyladenosine transferase [Komagataella pastoris CBS 7435]
Length = 328
Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/351 (48%), Positives = 229/351 (65%), Gaps = 39/351 (11%)
Query: 10 KGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGN 69
KG +GP Q + F+ GQHILKNPL+ + IV KA I+ +D +LE+GPGTGN
Sbjct: 16 KGLSLNGPKQVAATNSV-FKFNTQLGQHILKNPLVAQGIVDKANIRPSDTVLEVGPGTGN 74
Query: 70 LTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANI 129
LT ++L+ + VIA E+D RM EL +R Q P +L +I GD +K DLPYFDIC++N
Sbjct: 75 LTMRILQKARKVIASEMDPRMAAELTKRVQGKPEQKKLDIILGDFIKQDLPYFDICISNT 134
Query: 130 PYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLL 189
PYQISSPL FKLL R AI+MFQ+EFA+RL+A+PGD LYCRLSVN Q+ A V+H++
Sbjct: 135 PYQISSPLVFKLLNQPKPPRVAILMFQREFALRLLARPGDSLYCRLSVNVQMWANVTHIM 194
Query: 190 KVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
KVG+NNFRPPP+V+SSVVRIE + PRP ++ EWDG LRICF+RKN+T+S+ F+ K+V+
Sbjct: 195 KVGRNNFRPPPQVESSVVRIEVKNPRPNIDFNEWDGLLRICFVRKNRTISAGFKNKSVIE 254
Query: 250 MLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGD- 308
+LEKNY+T A +++N ++M VE+ D +
Sbjct: 255 ILEKNYKTYLATIAAEN-------------------------------NQMFVEEPDNNM 283
Query: 309 SDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+D+ K+KV VL + F ++RA KL Q +FL LL F+K GIHF+
Sbjct: 284 TDL------IKEKVNLVLDQTGFSDQRAGKLDQVDFLKLLYAFHKVGIHFA 328
>gi|190348449|gb|EDK40904.2| dimethyladenosine transferase [Meyerozyma guilliermondii ATCC 6260]
Length = 497
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/330 (49%), Positives = 220/330 (66%), Gaps = 41/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + VIA E+D R
Sbjct: 209 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVIASEMDPR 268
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KTDLPYFD+C++N PYQISSPL FKLL R
Sbjct: 269 MAAELTKRVHGTPQQKKLEILLGDFIKTDLPYFDVCISNTPYQISSPLVFKLLNQPRPPR 328
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFA+RL+A+PGD LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 329 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 388
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRICF+RKNKT+++ F+ +NVL +LEKNY+T A
Sbjct: 389 EIKNPRPNIDFDEWDGLLRICFVRKNKTIAAGFKSQNVLEILEKNYKTYLATH------- 441
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
+D M ++ D + V+ E D+VL +E
Sbjct: 442 ---------------------------EDAMMIDHKDTTNTVK----ELIDRVL---QET 467
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F EKR++K+ Q +FL LL F++ GIHF+
Sbjct: 468 GFAEKRSAKMDQTDFLKLLYAFHQVGIHFA 497
>gi|354545789|emb|CCE42517.1| hypothetical protein CPAR2_201600 [Candida parapsilosis]
Length = 326
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/330 (48%), Positives = 221/330 (66%), Gaps = 35/330 (10%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNP + + IV KA IK +D++LE+GPGTGNLT ++LE + VIAVE+D R
Sbjct: 32 FNTNLGQHILKNPQIAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVIAVEMDPR 91
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KTDLPYFD+C++N PYQISSPL FKLL R
Sbjct: 92 MGAELTKRVHGTPQEKKLEILLGDFIKTDLPYFDVCISNTPYQISSPLVFKLLNQPRPPR 151
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRLVA+PGD+LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 152 VSILMFQREFAMRLVARPGDELYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 211
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRI F+RKNKT+++ F+ N++ +LEKNY+T A
Sbjct: 212 EVKNPRPNIDFNEWDGLLRIVFVRKNKTIAAGFKSSNIIDILEKNYKTWLA--------- 262
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
+ G N +M VD+ +D + + K+K+ VL E
Sbjct: 263 ----------TTGQENDGDAMVVDNRADLK----------------NLIKEKITKVLTET 296
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F ++RA K+ Q +FL LL F++ G+HF+
Sbjct: 297 GFSDQRAGKMDQTDFLKLLYAFHQVGLHFA 326
>gi|198436563|ref|XP_002125054.1| PREDICTED: similar to GF16271, partial [Ciona intestinalis]
Length = 381
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/331 (50%), Positives = 211/331 (63%), Gaps = 47/331 (14%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+ GQHILKNPL++ +V+KA +K+TD +LEIGPGTGN+T K+LE VIA E+
Sbjct: 20 GIMFNTGVGQHILKNPLIINGMVEKAALKATDTVLEIGPGTGNMTVKMLEKVNKVIACEI 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD-LPYFDICVANIPYQISSPLTFKLLFHQ 145
D RM ELQ+R TP +L ++ GDVLK + LP+F++CVAN+PYQISSP+ FKLL H+
Sbjct: 80 DPRMSAELQKRVCGTPLQKKLHLMVGDVLKLESLPFFNVCVANLPYQISSPIVFKLLLHR 139
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P FRCA++MFQ+EFA RLVA+PG+KLYCRLS+NTQL ARV L+KVGKNNF+PPPKV+SS
Sbjct: 140 PLFRCAVLMFQREFAQRLVAKPGEKLYCRLSINTQLLARVDLLMKVGKNNFKPPPKVESS 199
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
VVRIEPR P P +N EWDG +RI F+RKNKTLS +FR +VL MLEKNYR
Sbjct: 200 VVRIEPRNPPPPINFTEWDGLVRIAFLRKNKTLSGLFRTSSVLEMLEKNYRI-------- 251
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
+ SL N + D K KV ++
Sbjct: 252 HCSLNNETVPDDLC--------------------------------------MKTKVCSI 273
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGI 356
L E F+ RA + +FL L+ N I
Sbjct: 274 LEENNFDSMRARTMDIDDFLRTLNTANTKAI 304
>gi|340377024|ref|XP_003387030.1| PREDICTED: probable dimethyladenosine transferase-like [Amphimedon
queenslandica]
Length = 307
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/270 (58%), Positives = 203/270 (75%), Gaps = 7/270 (2%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F K KGQHILKNPL++ SIV+KAG+ +D +LE+GPGTGN+T KLL+A K VIA E+D+R
Sbjct: 2 FEKGKGQHILKNPLIISSIVEKAGLNPSDTVLEVGPGTGNMTVKLLDAAKKVIACEVDTR 61
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
+V ELQ+R Q TP +++L+V+ GDVL DLP+F +CVAN+PYQISSP FKLL H+P FR
Sbjct: 62 LVAELQKRVQGTPQASKLQVLVGDVLSRDLPFFSVCVANLPYQISSPFVFKLLLHRPLFR 121
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
CA++MFQ+EFA RLVA+P DKLYCRLSVN QL ARV+HL+KVGKNNF+PPP+V+SSVVRI
Sbjct: 122 CAVLMFQQEFAQRLVAKPSDKLYCRLSVNVQLLARVTHLMKVGKNNFKPPPQVESSVVRI 181
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EP P P +N EWDG ++I F RKN++LS+ F+ K VL +L KNY +L S
Sbjct: 182 EPFNPPPPINYQEWDGLIQIAFQRKNRSLSATFKNKKVLELLNKNYHIHASLHSKVVPDD 241
Query: 270 GNTEIGTDTPSLGDSNG-----DQSMGVDD 294
N I + S+ D +G ++M +DD
Sbjct: 242 FN--IKSHISSILDESGFSSKRPRTMSIDD 269
>gi|19112914|ref|NP_596122.1| 18S rRNA dimethylase (predicted) [Schizosaccharomyces pombe 972h-]
gi|26556992|sp|Q9USU2.1|DIM1_SCHPO RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|6048291|emb|CAB58154.1| 18S rRNA dimethylase (predicted) [Schizosaccharomyces pombe]
Length = 307
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/330 (50%), Positives = 215/330 (65%), Gaps = 46/330 (13%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+K GQHILKNPL+ + IV KA +K +D +LE+GPGTGNLT ++LE + VIAVE+D R
Sbjct: 24 FNKDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPGTGNLTVRMLEKARKVIAVEMDPR 83
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M E+ +R Q TP +L+V+ GDV+KTDLPYFD+CV+N PYQISSPL FKLL +PA R
Sbjct: 84 MAAEITKRVQGTPKEKKLQVVLGDVIKTDLPYFDVCVSNTPYQISSPLVFKLLQQRPAPR 143
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
AI+MFQ+EFA+RLVA+PGD LYCRLS N Q+ A V H++KVGKNNFRPPP V+SSVVRI
Sbjct: 144 AAILMFQREFALRLVARPGDPLYCRLSANVQMWAHVKHIMKVGKNNFRPPPLVESSVVRI 203
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EP+ P P + EWDG LRI F+RKNKT+ + F+ +++ M+E NYRT SQN
Sbjct: 204 EPKNPPPPLAFEEWDGLLRIVFLRKNKTIGACFKTSSIIEMVENNYRTW----CSQN--- 256
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
+ M ED D S ++G VL++
Sbjct: 257 ----------------------------ERMVEEDFDVKSLIDG-----------VLQQC 277
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
++ RASK Q EFL LL F++ G+HF+
Sbjct: 278 NLQDARASKCGQTEFLSLLHAFHQVGVHFA 307
>gi|146414153|ref|XP_001483047.1| dimethyladenosine transferase [Meyerozyma guilliermondii ATCC 6260]
Length = 497
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/330 (49%), Positives = 220/330 (66%), Gaps = 41/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + VIA E+D R
Sbjct: 209 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVIASEMDPR 268
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KTDLPYFD+C++N PYQISSPL FKLL R
Sbjct: 269 MAAELTKRVHGTPQQKKLEILLGDFIKTDLPYFDVCISNTPYQISSPLVFKLLNQPRPPR 328
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFA+RL+A+PGD LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 329 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 388
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRICF+RKNKT+++ F+ +NVL +LEKNY+T A
Sbjct: 389 EIKNPRPNIDFDEWDGLLRICFVRKNKTIAAGFKSQNVLEILEKNYKTYLATH------- 441
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
+D M ++ D + V+ E D+VL +E
Sbjct: 442 ---------------------------EDAMMIDHKDTTNTVK----ELIDRVL---QET 467
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F EKR++K+ Q +FL LL F++ GIHF+
Sbjct: 468 GFAEKRSAKMDQTDFLKLLYAFHQVGIHFA 497
>gi|50306253|ref|XP_453098.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|52788270|sp|P78697.3|DIM1_KLULA RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49642232|emb|CAH00194.1| KLLA0D00594p [Kluyveromyces lactis]
Length = 320
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/330 (50%), Positives = 215/330 (65%), Gaps = 40/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA IK +D++LEIGPGTGNLT ++LE + V+AVE D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVVAVEFDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KT+LPYFD+C++N PYQISSPL FKL+ R
Sbjct: 91 MAAELTKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPKPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H++KVGKNNFRPPPKV+SSVVRI
Sbjct: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRI 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRPQV+ EWDG LRI F+RKN+T+++ F+ VL +LEKNY+ A QS+
Sbjct: 211 EIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEKNYKAFLATQSA----- 265
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
T S GDS ++E K+K+ VL E
Sbjct: 266 ------VPTTSSGDS-----------------------------LINEVKEKIEQVLSET 290
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
EKRA K Q +FL LL F++ GIHF+
Sbjct: 291 GLAEKRAGKCDQTDFLKLLYGFHQVGIHFA 320
>gi|327348821|gb|EGE77678.1| dimethyladenosine transferase dimethyltransferase [Ajellomyces
dermatitidis ATCC 18188]
Length = 383
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 183/348 (52%), Positives = 226/348 (64%), Gaps = 26/348 (7%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP + ++IV KA +K +D +LEIGPGTGNLT K+LE K VIAVELD RM E+
Sbjct: 39 GQHILKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEV 98
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P RL+V+ GDV+KTDLPYFD+C++N PYQISSPLTFKLL PA R I+M
Sbjct: 99 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLAIDPAPRVCILM 158
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMRL A+PGDKLY RLSVN Q+ AR+ H++KVGKNNF+PPP V+SSVVRI P+ P
Sbjct: 159 FQREFAMRLFAKPGDKLYSRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNP 218
Query: 215 RPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
RPQ++ EWDG LR+ F+RKNKT+ SS +VL MLE NYRT A Q++ G E
Sbjct: 219 RPQISYDEWDGLLRVAFVRKNKTMRSSFLGTTSVLDMLESNYRTWCA-QNNIPVEDGPVE 277
Query: 274 IGTDTPSLGDS---------NGDQSMGVDDGSDDEMDVEDD-----------DGDSDVEG 313
D L D+ D +M VDD D DD + +G
Sbjct: 278 GLQD--ELMDTMEEQGELEEELDGAMDVDDDGDVPEFFADDKPKLNSNPSKENPGRKKKG 335
Query: 314 EVSEF-KDKVLAVLR-EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+V E ++KV VL E +KRA + EFL LL FN+ GIHFS
Sbjct: 336 KVRELVREKVRQVLEVETGLADKRARMCDEGEFLKLLWAFNQKGIHFS 383
>gi|401623407|gb|EJS41507.1| dim1p [Saccharomyces arboricola H-6]
Length = 318
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 225/359 (62%), Gaps = 41/359 (11%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
M +K G S + + F+ GQHILKNPL+ + IV KA I+ +DV+
Sbjct: 1 MGKAPKKKYSGATSSKQVSAEKHLSSVFKFNTDLGQHILKNPLVAQGIVDKAQIRPSDVV 60
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LE+GPGTGNLT ++LE K V+AVE+D RM EL +R + TP +L+++ GD +KT+LP
Sbjct: 61 LEVGPGTGNLTVRILEQAKNVVAVEMDPRMAAELTKRVRGTPVEKKLEIMLGDFMKTELP 120
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFDIC++N PYQISSPL FKL+ R +I+MFQ+EFA+RL+A+PGD LYCRLS N Q
Sbjct: 121 YFDICISNTPYQISSPLVFKLINQPRPPRVSILMFQREFALRLLARPGDSLYCRLSANVQ 180
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
+ A V+H++KVGKNNFRPPP+V+SSVVR+E + PRPQV+ EWDG LRI F+RKN+T+S+
Sbjct: 181 MWANVTHIMKVGKNNFRPPPQVESSVVRLEIKNPRPQVDYNEWDGLLRIVFVRKNRTISA 240
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
F+ VL +LEKNY+T A+ N E+ VDD
Sbjct: 241 GFKSTTVLDILEKNYKTFLAM---------NNEM-----------------VDDTKGSMH 274
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
D+ K+K+ AVL+E +KRA K Q +FL LL F++ GIHFS
Sbjct: 275 DL---------------IKEKIEAVLKETSLSDKRAGKCDQNDFLRLLYAFHQVGIHFS 318
>gi|148699068|gb|EDL31015.1| RIKEN cDNA D530005L17 [Mus musculus]
Length = 1620
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/304 (55%), Positives = 213/304 (70%), Gaps = 19/304 (6%)
Query: 43 LLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTP 102
L+VESI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A ELD R+V EL +R Q TP
Sbjct: 146 LVVESIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTP 205
Query: 103 YSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMR 162
+++L+V+ GDVLK+DLP+FD CVAN+PYQISSP FKLL H+P FRCAI+MFQ+EFA+R
Sbjct: 206 LASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALR 265
Query: 163 LVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVE 222
LVA+PGDKLYCRLS+NTQL A V HL+KVGKNNFR PPKV+SSVVRIEP+ P P +N E
Sbjct: 266 LVAKPGDKLYCRLSINTQLLAHVDHLMKVGKNNFRLPPKVESSVVRIEPKNPPPPINFQE 325
Query: 223 WDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLG 282
WD +RI F+RKNKTLS+ F+ V +LEKNYR + S+ NT I D S+
Sbjct: 326 WDDLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI--------HCSVQNTVISEDF-SIA 376
Query: 283 DSNGD--QSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKD-KVLAVLREGQFEEKRASKL 339
D S G D MD++ D E + SE KD KVL +L Q ++ + +L
Sbjct: 377 DKIQHILTSTGFSDKRARSMDID----DFIREKQKSEAKDRKVLEIL---QVKDSKIQEL 429
Query: 340 TQQE 343
Q E
Sbjct: 430 EQTE 433
>gi|119193222|ref|XP_001247217.1| hypothetical protein CIMG_00988 [Coccidioides immitis RS]
Length = 346
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 181/353 (51%), Positives = 231/353 (65%), Gaps = 40/353 (11%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQH+LKNP + ++IV KA +K +DV+LE+GPG+GNLT K+LE K VIAVELD RM E+
Sbjct: 6 GQHVLKNPGVAQAIVDKADLKQSDVVLEVGPGSGNLTVKILEKAKKVIAVELDPRMAAEV 65
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P RL+V+ GDV+KTDLPYFD+C++N PYQISSPLTFKLL PA R I+M
Sbjct: 66 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATTPAPRVCILM 125
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMRL A+PGDKLY RLSVN Q+ A++ H++KVGKNNF+PPP V+SSVVRI P+ P
Sbjct: 126 FQREFAMRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKTP 185
Query: 215 RPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
RP ++ EWDG LRI F+RKNKTL SS +VLSMLE NY T A QN E
Sbjct: 186 RPDISYDEWDGLLRIAFVRKNKTLRSSFLGTSSVLSMLESNYTTWCA----QNDI--PVE 239
Query: 274 IGTDTPSLGDSNGDQSMGVD-----DGSDDEMDVEDDDGD-------------------- 308
+G D D D+ M ++ DG D+ MDV DD+GD
Sbjct: 240 VGPD-----DDVEDEGMDIEYGQENDGFDELMDV-DDEGDIPDFFKDKPDPTTQVPKTKP 293
Query: 309 SDVEGEVSEF-KDKVLAVLREGQ-FEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ G+V++ + KV VL + +KRA + +FL LL FN+ GIHF+
Sbjct: 294 TKKHGKVAKLVRKKVRQVLEDDTGLADKRARMCDEGDFLKLLWSFNQRGIHFN 346
>gi|410076988|ref|XP_003956076.1| hypothetical protein KAFR_0B06450 [Kazachstania africana CBS 2517]
gi|372462659|emb|CCF56941.1| hypothetical protein KAFR_0B06450 [Kazachstania africana CBS 2517]
Length = 318
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 165/359 (45%), Positives = 225/359 (62%), Gaps = 41/359 (11%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MA +K G + + + + F+ GQHILKNPL+ + IV KA IK +DV+
Sbjct: 1 MAKAAKKKYSGATTNKQVEAEKHLSSVFKFNTDLGQHILKNPLVAQGIVDKANIKPSDVV 60
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LE+GPGTGNLT ++LE + V+AVE+D RM EL +R TP +L++I GD +KT+LP
Sbjct: 61 LEVGPGTGNLTVRILEQARKVVAVEMDPRMAAELTKRVHGTPAERKLEIILGDFMKTELP 120
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFD+C++N PYQISSPL FKL+ R +I+MFQ+EFAMRL+A+PGD LYCRLS N Q
Sbjct: 121 YFDVCISNTPYQISSPLVFKLINQPRPPRVSILMFQREFAMRLLAKPGDSLYCRLSANVQ 180
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
+ A V+H++KVG+NNFRPPP+V+SSVVRIE + PRPQ++ EWDG LRI F+RKN+ +S+
Sbjct: 181 MWANVTHIMKVGRNNFRPPPQVESSVVRIEIKSPRPQIDFNEWDGLLRIVFVRKNRMISA 240
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
F+ VL +LEKNY+T A+ N E+ + D+NG
Sbjct: 241 GFKSNTVLEILEKNYKTYLAM---------NNEM------VDDANGSM------------ 273
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ K+K+ VL+E +KRA K Q +FL LL F++ GIHFS
Sbjct: 274 --------------LETVKEKIATVLQETGLSDKRAGKCDQNDFLKLLYAFHQVGIHFS 318
>gi|444314721|ref|XP_004178018.1| hypothetical protein TBLA_0A07080 [Tetrapisispora blattae CBS 6284]
gi|387511057|emb|CCH58499.1| hypothetical protein TBLA_0A07080 [Tetrapisispora blattae CBS 6284]
Length = 321
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 160/330 (48%), Positives = 216/330 (65%), Gaps = 39/330 (11%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + VIAVE D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVIAVEFDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L +I GD +KT+LPYFDIC++N PYQISSPL FKL+ R
Sbjct: 91 MAAELTKRVHGTPAEKKLDIILGDFMKTELPYFDICISNTPYQISSPLVFKLINQPKPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H++KVG+NNFRPPP+V+SSVVRI
Sbjct: 151 VSILMFQREFAMRLLARPGDTLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E ++PRPQ++ EWDG LRI F+RKN+T+S+ F+ +L +LEKNY+ ++Q
Sbjct: 211 EIKQPRPQIDFTEWDGLLRIVFVRKNRTISAGFKSNAILEILEKNYKAWLSMQ------- 263
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
+D E+D++ +D + K K+ VL+E
Sbjct: 264 --------------------------NDMELDIDSND------SMIPIVKSKIEQVLKET 291
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA K Q +FL LL F++ GIHFS
Sbjct: 292 NMSDKRAGKCDQNDFLKLLYGFHQVGIHFS 321
>gi|345564824|gb|EGX47784.1| hypothetical protein AOL_s00083g292 [Arthrobotrys oligospora ATCC
24927]
Length = 387
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 169/349 (48%), Positives = 224/349 (64%), Gaps = 24/349 (6%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
+K GQHIL NP +V+ I+ KA +K +DV+LE+GPGTGNLT K+LE + VIAVE+D R
Sbjct: 44 MNKDMGQHILINPGIVDRIIDKAALKQSDVVLEVGPGTGNLTMKILENARKVIAVEMDPR 103
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R Q P +L+++ GDV+KT+LPYFD+C++N PYQISSPL FKLL R
Sbjct: 104 MAAELTKRVQGKPVERKLEILLGDVIKTELPYFDVCISNTPYQISSPLVFKLLALPTPPR 163
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
++MFQKEFA RL AQPGD Y RLS N Q+ ++V+H++KVGK NF+PPP+V+S+VV+I
Sbjct: 164 MCVLMFQKEFADRLTAQPGDAFYSRLSANVQMWSKVTHVMKVGKGNFKPPPQVESAVVKI 223
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EP+ PRP V+ EWDG LRI FIRKNKT+S++F L V +++E+NYRT A QN
Sbjct: 224 EPKVPRPTVSYEEWDGMLRILFIRKNKTISAVFGLSTVQTLIERNYRTWCA----QNDIP 279
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDD------------------GDSDV 311
TE G +G ++ +D + VEDDD G
Sbjct: 280 LETEEGDGDVEMG-GEAEEVAADNDAMEGLEGVEDDDLPRGYHEIINESRGAKKQGKRKY 338
Query: 312 EGEVSEF-KDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
G+V+E + KV VL E +RA+K Q +FL LL FNK GIHF+
Sbjct: 339 RGKVAELVRSKVKKVLEETDLANRRAAKCDQGDFLSLLYTFNKEGIHFN 387
>gi|403218367|emb|CCK72858.1| hypothetical protein KNAG_0L02440 [Kazachstania naganishii CBS
8797]
Length = 317
Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 165/330 (50%), Positives = 215/330 (65%), Gaps = 42/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE K V+AVE+D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAHIKPSDIVLEVGPGTGNLTVRILEKAKKVVAVEMDPR 89
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L ++ GD +KT+LPYFDIC++N PYQISSPL FKL+ R
Sbjct: 90 MAAELTKRVHGTPAEKKLDIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H++KVG+NNFRPPP+V+SSVVRI
Sbjct: 150 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 209
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRPQV+ EWDG LRI F+RKN+T+S+ F+ VL +LEKNY+ A+
Sbjct: 210 EIKNPRPQVDFNEWDGLLRIVFVRKNRTISAGFKSTTVLEILEKNYKAYLAM-------- 261
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
++EM VEDD D K K+ VLRE
Sbjct: 262 ---------------------------NNEM-VEDDSNLLDT------VKQKIETVLRET 287
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ +KRA K Q +FL LL F++ GIHFS
Sbjct: 288 ELNDKRAGKCDQNDFLKLLYSFHQVGIHFS 317
>gi|344229760|gb|EGV61645.1| Dimethyladenosine transferase [Candida tenuis ATCC 10573]
Length = 323
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 164/330 (49%), Positives = 218/330 (66%), Gaps = 38/330 (11%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA I+ +D +LE+GPGTGNLT ++LE K VIAVE+D R
Sbjct: 32 FNTDLGQHILKNPLVAQGIVDKAAIRPSDTVLEVGPGTGNLTVRILEQAKNVIAVEMDPR 91
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KT+LPYFD+C++N PYQISSPL FKLL R
Sbjct: 92 MAAELTKRVHGTPQQKKLEIMLGDFMKTELPYFDVCISNTPYQISSPLVFKLLNQPKPPR 151
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PG++LYCRLS N Q+ A V+H++KVGKNNFRPPPKV+SSVVRI
Sbjct: 152 VSILMFQREFAMRLLARPGEELYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRI 211
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP ++ EWDG LRI F+RKNKT+++ F+ NVL +LEKNY+T A+
Sbjct: 212 EVKSPRPNIDFGEWDGLLRIVFVRKNKTIAAGFKSNNVLDILEKNYKTFLAI-------- 263
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
SN + M V D +M + D K K+ VL
Sbjct: 264 --------------SNPEDVMMV----DSKMSMLD------------VVKTKIEQVLTNT 293
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ +KRA+KL Q +FL LL F++ GIHF+
Sbjct: 294 GYSDKRAAKLDQTDFLKLLYAFHQVGIHFA 323
>gi|452840772|gb|EME42710.1| hypothetical protein DOTSEDRAFT_155683 [Dothistroma septosporum
NZE10]
Length = 382
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/377 (47%), Positives = 240/377 (63%), Gaps = 33/377 (8%)
Query: 11 GKQKSGPYQGQGLGAGGISFHKSK--------GQHILKNPLLVESIVQKAGIKSTDVILE 62
G KS PY G S K+ GQHILKNP + ++IV KA +K +D++LE
Sbjct: 11 GIMKSDPYAGASARKQKASASKNAIFKMNTDIGQHILKNPGVAQAIVDKADVKQSDIVLE 70
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD-LPY 121
+GPGTGNLT ++LE K VIAVE D RM EL +RFQ TP + RL++I GDV+K + LPY
Sbjct: 71 VGPGTGNLTTRILEKAKRVIAVEQDPRMAAELTKRFQGTPMAKRLELILGDVIKMEQLPY 130
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FD+C++N PYQISSPLTFKLL P R ++MFQ+EFAMRL A+PG+KLY RLSVN Q+
Sbjct: 131 FDVCISNTPYQISSPLTFKLLATTPGPRNCVLMFQREFAMRLFAKPGEKLYSRLSVNCQM 190
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
A+V H++KVG+NNF PPP+V+S+VVRI P+ PRP ++ EWDG LR+CF+RKN+ L S
Sbjct: 191 WAKVDHVMKVGRNNFNPPPQVESNVVRISPKNPRPSISYDEWDGLLRVCFVRKNRVLRSG 250
Query: 242 FRLKN-VLSMLEKNYRTLQALQSS--QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDD 298
F N V++MLE NYRT A ++ N E+ D + G+Q + +D DD
Sbjct: 251 FLGTNSVMAMLESNYRTYCAQNDIPLEDGPAENNEVDDD---VDMDAGEQEVIMD--IDD 305
Query: 299 EMDVED--------------DDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKRASKLTQQ 342
E D+ D D+ + +G+V+E + KV VL + + EKRA +
Sbjct: 306 EEDLPDFFKEEADKKARKMMDNPNRKRKGKVAELVRSKVKKVLEVDTELAEKRARLCDEG 365
Query: 343 EFLYLLSLFNKAGIHFS 359
+FL LL FN+ GIHF+
Sbjct: 366 DFLKLLWAFNQEGIHFA 382
>gi|366992804|ref|XP_003676167.1| hypothetical protein NCAS_0D02250 [Naumovozyma castellii CBS 4309]
gi|342302033|emb|CCC69806.1| hypothetical protein NCAS_0D02250 [Naumovozyma castellii CBS 4309]
Length = 319
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 216/330 (65%), Gaps = 41/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + V+AVE+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KTDLPYFDIC++N PYQISSPL FKL+ R
Sbjct: 91 MAAELTKRVHGTPSEKKLEILLGDFMKTDLPYFDICISNTPYQISSPLVFKLINQPRPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H++KVG+NNFRPPP+V+SSVVRI
Sbjct: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRPQV+ EWDG LRI F+RKN+ +S+ F+ VL +LEKNY+T A+
Sbjct: 211 EIKTPRPQVDFNEWDGLLRIVFVRKNRMISAGFKSSTVLEILEKNYKTYLAM-------- 262
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
N E+ VDD ++V K+K+ VL+E
Sbjct: 263 -NNEM-----------------VDDTQGSMLEV---------------VKEKIATVLKET 289
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA K Q +FL LL F++ GIHFS
Sbjct: 290 GLADKRAGKCDQTDFLKLLYAFHQVGIHFS 319
>gi|449299993|gb|EMC96006.1| hypothetical protein BAUCODRAFT_34775 [Baudoinia compniacensis UAMH
10762]
Length = 382
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/387 (47%), Positives = 241/387 (62%), Gaps = 50/387 (12%)
Query: 2 AGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
AG +RK KGK + ++ + GQHILKNP + ++IV KA +K +D++L
Sbjct: 17 AGAAVRKGKGKMANNIFK----------MNTDIGQHILKNPGVAQAIVDKADLKQSDIVL 66
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT-DLP 120
E+GPGTGNLT ++LE K VIAVE D RM EL +RFQ+TP + RL++I GDV+K +LP
Sbjct: 67 EVGPGTGNLTTRILEKAKRVIAVEQDPRMAAELTKRFQATPAAKRLELILGDVIKMPELP 126
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFD+C++N PYQISSPLTFKLL P+ R ++MFQ+EFAMRL A+PGDKLY RLSVN Q
Sbjct: 127 YFDVCISNTPYQISSPLTFKLLATSPSPRSCVLMFQREFAMRLFAKPGDKLYSRLSVNAQ 186
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
+ A+V H++KVGKNNF PPP+V+S+VVRI P+ PRPQ++ EWDG LRI F+RKN+ L S
Sbjct: 187 MWAKVDHVMKVGKNNFNPPPQVESNVVRITPKTPRPQISYDEWDGLLRIAFVRKNRVLRS 246
Query: 241 IFR-LKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
F +V+ MLE NYRT A QN ++ D L D+ M VD+G +DE
Sbjct: 247 AFLGTSSVMDMLEANYRTFCA----QN------DVVLDDGPLDDAMAG-GMDVDEGGEDE 295
Query: 300 -------------------------MDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQFE 332
D+ + +G+VSE + KV VL E +
Sbjct: 296 GWDGIMDVDDDDDVPDFFKEEADRKAKKLQDNPNRKRKGKVSELVRAKVKKVLEIETELA 355
Query: 333 EKRASKLTQQEFLYLLSLFNKAGIHFS 359
E+RA + +FL LL FN+ GIHFS
Sbjct: 356 ERRARMCDEGDFLKLLYAFNQEGIHFS 382
>gi|406608146|emb|CCH40580.1| Dimethyladenosine transferase [Wickerhamomyces ciferrii]
Length = 324
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/330 (48%), Positives = 215/330 (65%), Gaps = 35/330 (10%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + V AVE+D R
Sbjct: 30 FNTDLGQHILKNPLIAQGIVDKANIKPSDIVLEVGPGTGNLTVRILERARKVFAVEMDPR 89
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KT+LPYFDIC++N PYQISSPL FKL+ R
Sbjct: 90 MGAELTKRVHGTPVEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFA+RL+A+PGD LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 150 VSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 209
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRPQV+ EWDG LRI F+RKN+T+++ F+ +L +LEKNY+T
Sbjct: 210 EIKNPRPQVDYNEWDGLLRIVFVRKNRTIAAGFKSTTILEILEKNYKTY----------- 258
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
L +GD M V++ S G + K+K+ VL E
Sbjct: 259 -----------LATLDGDAMMDVENASKK-------------NGLLETVKEKINQVLTET 294
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
EKRA K Q +FL LL F++ GIHF+
Sbjct: 295 GLSEKRAGKCDQNDFLRLLYAFHQVGIHFA 324
>gi|367017099|ref|XP_003683048.1| hypothetical protein TDEL_0G04700 [Torulaspora delbrueckii]
gi|359750711|emb|CCE93837.1| hypothetical protein TDEL_0G04700 [Torulaspora delbrueckii]
Length = 319
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/330 (49%), Positives = 216/330 (65%), Gaps = 41/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA I+ +D +LE+GPGTGNLT ++LE K VIAVE+D R
Sbjct: 31 FNTDLGQHILKNPLIAQGIVDKAQIRPSDTVLEVGPGTGNLTVRILEQAKNVIAVEMDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KT+LPYFDIC++N PYQISSPL FKL+ R
Sbjct: 91 MAAELTKRVHGTPVERKLEILLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFA+RL+A+PGD LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVR+
Sbjct: 151 VSILMFQREFALRLIARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRL 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRPQV+ EWDG LRI F+RKN+T+S+ F+ +L +LEKNY+T A+
Sbjct: 211 EVKNPRPQVDYNEWDGLLRIVFVRKNRTISAGFKSSTILEILEKNYKTYLAM-------- 262
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
N E+ VDD ++V K K+ VL+E
Sbjct: 263 -NNEM-----------------VDDTKGSMLEV---------------VKSKINTVLQET 289
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ +KRA K Q +FL LL F++ GIHFS
Sbjct: 290 ELADKRAGKCDQNDFLKLLYAFHQVGIHFS 319
>gi|6324989|ref|NP_015057.1| Dim1p [Saccharomyces cerevisiae S288c]
gi|1169344|sp|P41819.1|DIM1_YEAST RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|601876|gb|AAA57357.1| dimethyladenosine transferase [Saccharomyces cerevisiae]
gi|1370549|emb|CAA98001.1| DIM1 [Saccharomyces cerevisiae]
gi|151942536|gb|EDN60882.1| dimethyladenosine transferase [Saccharomyces cerevisiae YJM789]
gi|190407700|gb|EDV10965.1| dimethyladenosine transferase [Saccharomyces cerevisiae RM11-1a]
gi|256271159|gb|EEU06250.1| Dim1p [Saccharomyces cerevisiae JAY291]
gi|259149891|emb|CAY86694.1| Dim1p [Saccharomyces cerevisiae EC1118]
gi|285815278|tpg|DAA11170.1| TPA: Dim1p [Saccharomyces cerevisiae S288c]
gi|323302623|gb|EGA56429.1| Dim1p [Saccharomyces cerevisiae FostersB]
gi|323306894|gb|EGA60178.1| Dim1p [Saccharomyces cerevisiae FostersO]
gi|323331103|gb|EGA72521.1| Dim1p [Saccharomyces cerevisiae AWRI796]
gi|323335244|gb|EGA76533.1| Dim1p [Saccharomyces cerevisiae Vin13]
gi|323346064|gb|EGA80354.1| Dim1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323351899|gb|EGA84438.1| Dim1p [Saccharomyces cerevisiae VL3]
gi|349581556|dbj|GAA26713.1| K7_Dim1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365762663|gb|EHN04196.1| Dim1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296254|gb|EIW07357.1| Dim1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 318
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 224/359 (62%), Gaps = 41/359 (11%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
M +K G S + + F+ GQHILKNPL+ + IV KA I+ +DV+
Sbjct: 1 MGKAAKKKYSGATSSKQVSAEKHLSSVFKFNTDLGQHILKNPLVAQGIVDKAQIRPSDVV 60
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LE+GPGTGNLT ++LE K V+AVE+D RM EL +R + TP +L+++ GD +KT+LP
Sbjct: 61 LEVGPGTGNLTVRILEQAKNVVAVEMDPRMAAELTKRVRGTPVEKKLEIMLGDFMKTELP 120
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFDIC++N PYQISSPL FKL+ R +I+MFQ+EFA+RL+A+PGD LYCRLS N Q
Sbjct: 121 YFDICISNTPYQISSPLVFKLINQPRPPRVSILMFQREFALRLLARPGDSLYCRLSANVQ 180
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
+ A V+H++KVGKNNFRPPP+V+SSVVR+E + PRPQV+ EWDG LRI F+RKN+T+S+
Sbjct: 181 MWANVTHIMKVGKNNFRPPPQVESSVVRLEIKNPRPQVDYNEWDGLLRIVFVRKNRTISA 240
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
F+ V+ +LEKNY+T A+ N E+ VDD
Sbjct: 241 GFKSTTVMDILEKNYKTFLAM---------NNEM-----------------VDDTKGSMH 274
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DV K+K+ VL+E +KRA K Q +FL LL F++ GIHFS
Sbjct: 275 DV---------------VKEKIDTVLKETDLGDKRAGKCDQNDFLRLLYAFHQVGIHFS 318
>gi|156055498|ref|XP_001593673.1| hypothetical protein SS1G_05101 [Sclerotinia sclerotiorum 1980]
gi|154702885|gb|EDO02624.1| hypothetical protein SS1G_05101 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 383
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/388 (44%), Positives = 235/388 (60%), Gaps = 34/388 (8%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
M K K PY+ +K GQHILKNP + E+IV+KA +K TD +
Sbjct: 1 MPKLKTSKRNTAAAGTPYEKAAALTNSFKHNKDYGQHILKNPGVAEAIVKKANLKPTDTV 60
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LE+GPGTGNLT ++LE+ K VIAVE+D RM E+ +R Q P RL+V+ GDV+KT+LP
Sbjct: 61 LEVGPGTGNLTVRILESAKKVIAVEVDPRMAAEVTKRVQGKPEQKRLEVLLGDVIKTELP 120
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
+FD+C++N PYQISSPL FKLL RC+++MFQ+EFA+RL A+PGD LYCRLSVN Q
Sbjct: 121 HFDVCISNTPYQISSPLVFKLLSLPNPPRCSVLMFQREFALRLTARPGDSLYCRLSVNAQ 180
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICFIRKNKTL 238
A+++H++KVGKNNFRPPP+V+SSVVRIEP+ K RP V+ EWDG LRICF+RKN+T+
Sbjct: 181 FFAKITHIMKVGKNNFRPPPQVESSVVRIEPKTGKERPGVSWEEWDGMLRICFVRKNRTM 240
Query: 239 -SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
+S +K VL+M E+NYR S+ N +L T + + + + + +D
Sbjct: 241 RASWLGMKQVLAMCERNYRV---YCSTNNIALDETPVDDEDEDMDLDDAPIAEEGEDEWG 297
Query: 298 DEMDVEDDDGDSDVEGEVSEF-----------------KDKVLAVLRE---------GQF 331
MD D G+ E E F K +V ++RE +
Sbjct: 298 GNMDT--DKGEDGFEDEAPSFFQELKGTNKPKTKSKVPKTRVAELVREKIRKVLEDVTEL 355
Query: 332 EEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ RA K + +FL LL FN+ G+HFS
Sbjct: 356 ADTRAGKCDENDFLRLLFAFNEEGLHFS 383
>gi|50293399|ref|XP_449111.1| hypothetical protein [Candida glabrata CBS 138]
gi|52782776|sp|Q6FKY3.1|DIM1_CANGA RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49528424|emb|CAG62081.1| unnamed protein product [Candida glabrata]
Length = 317
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/359 (45%), Positives = 221/359 (61%), Gaps = 42/359 (11%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MA +K G + + F+ GQHILKNPL+ + IV KA IK +D++
Sbjct: 1 MAKADKKKYSGATTNKQVAAEKHLTSVFKFNTDLGQHILKNPLVAQGIVDKAQIKPSDIV 60
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LE+GPGTGNLT ++LE + V+AVE+D RM EL +R TP +L+++ GD +KT+LP
Sbjct: 61 LEVGPGTGNLTVRILEQARKVVAVEMDPRMAAELTKRVHGTPAEKKLEIMLGDFMKTELP 120
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFDIC++N PYQISSPL FKL+ R +I+MFQ+EFAMRL+A+PGD LYCRLS N Q
Sbjct: 121 YFDICISNTPYQISSPLVFKLINQPRPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQ 180
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
+ A V+H++KVG+NNFRPPP+V+SSVVRIE + PRPQ++ EWDG LRI F+RKN+T+S+
Sbjct: 181 MWANVTHIMKVGRNNFRPPPQVESSVVRIEIKNPRPQIDFNEWDGLLRIVFVRKNRTISA 240
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
F+ VL +LEKNY+T + +++ S DE
Sbjct: 241 GFKSTTVLEILEKNYKTF-------------------------------LAINNQSIDE- 268
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
E S K K+ VL+E EKRA K Q +FL LL F++ GIHFS
Sbjct: 269 ----------TENLQSLIKQKIETVLKETGLAEKRAGKCDQTDFLKLLYAFHQVGIHFS 317
>gi|124087844|ref|XP_001346899.1| Ribosomal RNA adenine dimethylase [Paramecium tetraurelia strain
d4-2]
gi|145474821|ref|XP_001423433.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057288|emb|CAH03272.1| Ribosomal RNA adenine dimethylase, putative [Paramecium
tetraurelia]
gi|124390493|emb|CAK56035.1| unnamed protein product [Paramecium tetraurelia]
Length = 353
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/348 (48%), Positives = 230/348 (66%), Gaps = 12/348 (3%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
+ + F+KS GQHIL N +++ IV K+ I+ TD++LEIGPGTGNLT+ LL+ K VI
Sbjct: 5 VSKSNMVFNKSFGQHILINQQILQMIVDKSAIRPTDIVLEIGPGTGNLTELLLQRAKQVI 64
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
VE+D RMV+EL +RF+ + YS++ K+IQGD L +LP+FD+CVAN+PYQISSPL FKLL
Sbjct: 65 CVEIDPRMVIELTKRFKYSQYSDKFKLIQGDFLTAELPFFDLCVANVPYQISSPLVFKLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+P +RCA++MFQ+EFA RLVA+PG++LYCRLS N Q+ +RV HL+KVGKNNF+PPPKV
Sbjct: 125 AQRPLWRCAVLMFQQEFAFRLVAKPGNELYCRLSANVQMLSRVDHLMKVGKNNFKPPPKV 184
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQ 262
+SSVVRIEP+ P P +N +EWDG LRICF RKNK LS+IF+ K+VL LE N+ ++
Sbjct: 185 ESSVVRIEPKNPIPNINYIEWDGLLRICFNRKNKQLSAIFKNKSVLKTLEHNFHVIEQEG 244
Query: 263 SSQNSSLGNTE--IGT-----DTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEV 315
N N + I + D G + + E +DD D++ + E
Sbjct: 245 IKVNDPANNVKQLISSIMEEEDVKGKGKKDKKDKKDKQNQQKGEESESEDDEDNNQQPEK 304
Query: 316 SE-----FKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ F+ K+ +L+ +KR K+ +FL LL N GIHF
Sbjct: 305 QQTTQNPFRLKINEILKTNDMFQKRPVKMDNDDFLQLLCAMNAQGIHF 352
>gi|332376340|gb|AEE63310.1| unknown [Dendroctonus ponderosae]
Length = 306
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 174/339 (51%), Positives = 222/339 (65%), Gaps = 46/339 (13%)
Query: 21 QGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKM 80
Q + GI+F+K GQHILKNP+++ S+V+K+ I+STD +LEIGPGTGN+T +LLE K
Sbjct: 14 QEVAKQGITFNKQFGQHILKNPMVITSMVEKSAIRSTDTVLEIGPGTGNMTVRLLEKAKK 73
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V+A E+D+R+V ELQ+R Q T ++L+++ GDVLK +LP+F+ICVANIPYQISSPL FK
Sbjct: 74 VVACEIDTRLVAELQKRVQGTHLQSKLEILVGDVLKRELPFFNICVANIPYQISSPLVFK 133
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL H+P FRCA+IMFQ+EFA RLVA+PGDKLYCRLSVNTQL ARV L+KVGKNNFRPPP
Sbjct: 134 LLLHRPFFRCAVIMFQREFAQRLVAKPGDKLYCRLSVNTQLLARVDMLMKVGKNNFRPPP 193
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
KV+SSVVRIEPR P P + +EWDG RI F RKN+TL S F+ VL+ L+KNY+
Sbjct: 194 KVESSVVRIEPRNPPPPIPYIEWDGLTRIAFTRKNRTLGSAFKQSAVLAALDKNYKL--- 250
Query: 261 LQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKD 320
+ SL N + D K
Sbjct: 251 -----HCSLHNENVPEDF--------------------------------------NLKA 267
Query: 321 KVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+ +L + EKRA + Q +F+ LL FN G+HFS
Sbjct: 268 KLEEILLKADAAEKRARTMDQDDFMSLLHAFNSEGVHFS 306
>gi|365990505|ref|XP_003672082.1| hypothetical protein NDAI_0I02710 [Naumovozyma dairenensis CBS 421]
gi|343770856|emb|CCD26839.1| hypothetical protein NDAI_0I02710 [Naumovozyma dairenensis CBS 421]
Length = 319
Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 163/330 (49%), Positives = 216/330 (65%), Gaps = 41/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + VIAVE+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARNVIAVEMDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KT+LPYFDIC++N PYQISSPL FKL+ R
Sbjct: 91 MAAELTKRVHGTPGEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H++KVG+NNFRPPP+V+SSVVRI
Sbjct: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGRNNFRPPPQVESSVVRI 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRPQV+ EWDG LRI F+RKN+ +S+ F+ VL +LEKNY+T A+
Sbjct: 211 EIKNPRPQVDFNEWDGLLRIVFVRKNRMISAGFKSSTVLEILEKNYKTYLAM-------- 262
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
N E+ + D+ G + V K+K+ VLRE
Sbjct: 263 -NNEM------VDDTKGSMTAIV--------------------------KEKIETVLRET 289
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA K Q +FL LL F++ GIHFS
Sbjct: 290 GLADKRAGKCDQNDFLKLLYAFHQVGIHFS 319
>gi|365758154|gb|EHN00012.1| Dim1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 318
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/359 (45%), Positives = 224/359 (62%), Gaps = 41/359 (11%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
M +K G S + + F+ GQHILKNPL+ + IV KA I+ +DV+
Sbjct: 1 MGKAAKKKYSGTTSSKQVSAEKHLSSVFKFNTDLGQHILKNPLVAQGIVDKAQIRPSDVV 60
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LE+GPGTGNLT ++LE K V+AVE+D RM EL +R + TP +L+++ GD +KT+LP
Sbjct: 61 LEVGPGTGNLTVRILEQAKNVVAVEMDPRMAAELTKRVRGTPVEKKLEIMLGDFMKTELP 120
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFD+C++N PYQISSPL FKL+ R +I+MFQ+EFA+RL+A+PGD LYCRLS N Q
Sbjct: 121 YFDVCISNTPYQISSPLVFKLINQPRPPRVSILMFQREFALRLLARPGDSLYCRLSANVQ 180
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
+ A V+H++KVG+NNFRPPP+V+SSVVR+E + PRPQV+ EWDG LRI F+RKN+T+S+
Sbjct: 181 MWANVTHIMKVGRNNFRPPPQVESSVVRLEIKNPRPQVDYNEWDGLLRIVFVRKNRTISA 240
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
F+ V+ +LEKN++T A+ N E+ VDD
Sbjct: 241 GFKSTTVMDILEKNFKTFLAM---------NNEM-----------------VDDTKGSMH 274
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DV +K+ VL+E +KRA+K Q +FL LL F++ GIHFS
Sbjct: 275 DV---------------INEKIDTVLKETNLNDKRAAKCDQNDFLRLLYAFHQVGIHFS 318
>gi|347828726|emb|CCD44423.1| similar to dimethyladenosine transferase [Botryotinia fuckeliana]
Length = 382
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/388 (44%), Positives = 236/388 (60%), Gaps = 35/388 (9%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
M K K PY+ +K GQHILKNP + E+IV+KA +K TD +
Sbjct: 1 MPKAKTGKRNAAAAGTPYEKAAALTNSFKHNKDYGQHILKNPGVAEAIVKKANLKPTDTV 60
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LE+GPGTGNLT ++LE+ K VIAVE+D RM E+ +R Q P RL+V+ GDV+KT+LP
Sbjct: 61 LEVGPGTGNLTVRILESAKKVIAVEVDPRMAAEVTKRVQGKPEQKRLEVLLGDVIKTELP 120
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
+FD+C++N PYQISSPL FKLL RC+++MFQ+EFA+RL A+PGD LYCRLSVN Q
Sbjct: 121 HFDVCISNTPYQISSPLVFKLLSLPNPPRCSVLMFQREFALRLTARPGDSLYCRLSVNAQ 180
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICFIRKNKTL 238
A+++H++KVGKNNFRPPP+V+SSVVRIEP+ K RP V+ EWDG LRICF+RKN+T+
Sbjct: 181 FFAKITHIMKVGKNNFRPPPQVESSVVRIEPKTGKERPGVSWEEWDGMLRICFVRKNRTM 240
Query: 239 -SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
+S +K VL+M E+NYR S+ N +L T + + + + + +
Sbjct: 241 RASWLGMKQVLAMCERNYRV---YCSTNNIALDETPVEDEDEDMELDDAPIAE-EGEEEW 296
Query: 298 DEMDVEDDDGDSDVEGEVSEF-----------------KDKVLAVLRE---------GQF 331
MDVE G+ + E+ F K +V ++RE +
Sbjct: 297 GGMDVE--KGEETFDEEIPSFFQELKGTNKPKTKSKVPKTRVAELVREKIRKVLEDVTEL 354
Query: 332 EEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ RA K + +FL LL FN+ G+HFS
Sbjct: 355 ADTRAGKCDENDFLRLLFAFNEEGLHFS 382
>gi|156838911|ref|XP_001643153.1| hypothetical protein Kpol_449p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113749|gb|EDO15295.1| hypothetical protein Kpol_449p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 319
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 227/358 (63%), Gaps = 46/358 (12%)
Query: 7 RKEKGKQKSGPYQGQGLGAGG-----ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
+ K K P G+ + A F+ GQHILKNPL+ + IV KA IK +D++L
Sbjct: 3 KAAKKKYSGAPGSGKQVAAEKHLNTVFKFNTDLGQHILKNPLVAQGIVDKANIKPSDIVL 62
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
E+GPGTGNLT ++LE + V+AVE+D RM EL +R TP +L+++ GD +KT+LPY
Sbjct: 63 EVGPGTGNLTVRILEQARKVVAVEMDPRMAAELTKRVHGTPAEKKLEIMLGDFMKTELPY 122
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FDIC++N PYQISSPL FKL+ R +I+MFQ+EFA+RL+A+PGD LYCRLS N Q+
Sbjct: 123 FDICISNTPYQISSPLVFKLINQPRPPRVSILMFQREFALRLLARPGDSLYCRLSANVQM 182
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
A V+H++KVG+NNFRPPP+V+SSVVRIE + PRP+V+ EWDG LRI F+RKN+T+++
Sbjct: 183 WANVTHIMKVGRNNFRPPPQVESSVVRIEIKNPRPEVDFNEWDGLLRIVFVRKNRTIAAG 242
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMD 301
F+ +VL +LEKNY+T ++ N E+ DT GS E+
Sbjct: 243 FKSTSVLEILEKNYKTYLSM---------NNEMIDDT---------------TGSMTEV- 277
Query: 302 VEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+K+ VL+E + +KRA K Q +FL LL F++ GIHFS
Sbjct: 278 ----------------VKEKIETVLQETKLSDKRAGKCDQTDFLRLLYAFHQVGIHFS 319
>gi|398396512|ref|XP_003851714.1| hypothetical protein MYCGRDRAFT_73499 [Zymoseptoria tritici IPO323]
gi|339471594|gb|EGP86690.1| hypothetical protein MYCGRDRAFT_73499 [Zymoseptoria tritici IPO323]
Length = 329
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/358 (48%), Positives = 227/358 (63%), Gaps = 49/358 (13%)
Query: 11 GKQKSGPYQGQGL----GAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGP 65
G K PY G A I + GQHILKNP + ++IV KA +K +D++LE+GP
Sbjct: 12 GVGKGDPYAGAAARKSKAANNIFKMNTDIGQHILKNPGVAQAIVDKADVKQSDIVLEVGP 71
Query: 66 GTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDI 124
GTGNLT ++LE K VI VE D RM E+ +RFQ TP + RL++I GDV+K +LPYFD+
Sbjct: 72 GTGNLTTRILEKAKKVICVEQDPRMAAEITKRFQGTPAAKRLELILGDVIKMPELPYFDV 131
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
C++N PYQISSPLTFKLL PA R ++MFQ+EFAMRL A+PGDKLY RLSVN Q+ A+
Sbjct: 132 CISNTPYQISSPLTFKLLATSPAPRSCVLMFQREFAMRLFAKPGDKLYSRLSVNCQMWAK 191
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF-R 243
V H++KVGKNNF PPP+V+S+VVRI P+ PRPQ++ EWDG LR+CF+RKN+ L S F
Sbjct: 192 VDHVMKVGKNNFNPPPQVESNVVRICPKNPRPQISYDEWDGLLRVCFVRKNRVLRSAFIG 251
Query: 244 LKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVE 303
+V++MLE NYRT A QN EI D
Sbjct: 252 TTSVMAMLESNYRTFCA----QN------EIPLD-------------------------- 275
Query: 304 DDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DS +EG+VSE + KV+ VL + + +KR+ + +FL LL FN+ GIHF+
Sbjct: 276 ----DSPIEGKVSELVRAKVMKVLETDTELADKRSRMCDEGDFLKLLYAFNQEGIHFA 329
>gi|440294373|gb|ELP87390.1| dimethyladenosine transferase, putative [Entamoeba invadens IP1]
Length = 295
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 215/340 (63%), Gaps = 46/340 (13%)
Query: 20 GQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGK 79
+G FHKS+GQHILKNP++ + IV A I+ TDV+LEIGPGTGNLT K+L K
Sbjct: 2 SDSVGTNIFQFHKSEGQHILKNPMIAQQIVDAAEIRRTDVVLEIGPGTGNLTMKILPQCK 61
Query: 80 MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTF 139
+IA+E+D RM EL++R TPY ++++I GD LK DLPYFD+CV+N PY ISSPL F
Sbjct: 62 KLIAIEIDPRMAAELKKRVSITPYVKKIEIITGDFLKVDLPYFDVCVSNTPYSISSPLVF 121
Query: 140 KLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
KLL H+P FR A++MFQ+EFA+RLVA P D LYCRL+VNT L A + H++KVG+NNF+PP
Sbjct: 122 KLLNHRPQFRSAVLMFQREFALRLVATPEDPLYCRLTVNTHLLADIYHVMKVGRNNFKPP 181
Query: 200 PKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQ 259
PKV+SSVVR+ P KP PQ+N VE+DGFLRICF+RK+KTL S+F + +V+ +++N +
Sbjct: 182 PKVESSVVRMVPVKPAPQINLVEFDGFLRICFLRKHKTLKSLFTITSVVETMKRNLEAVC 241
Query: 260 ALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFK 319
++ + D D DV+ E
Sbjct: 242 KMRKLEF---------------------------------------DKDKDVKNE----- 257
Query: 320 DKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L +LRE +++R+ +T EFL L+ F + HF
Sbjct: 258 --MLEILREMGMDQRRSVTMTLDEFLELILAFMRKNYHFC 295
>gi|358390259|gb|EHK39665.1| hypothetical protein TRIATDRAFT_231783 [Trichoderma atroviride IMI
206040]
Length = 385
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 177/383 (46%), Positives = 241/383 (62%), Gaps = 33/383 (8%)
Query: 7 RKEKGKQKSGPYQGQGLGAGGIS----FHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
R ++ SGPY+ G + F+ + GQHILKNP + ++IV KA +K TD +LE
Sbjct: 6 RSKRNNASSGPYEKPGDKNSKTNNVFKFNTNFGQHILKNPGVSDAIVDKAFLKPTDTVLE 65
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPGTGNLT ++LE K I VELD RM E+ +R Q P +L+V+ GDV+KT+LP F
Sbjct: 66 VGPGTGNLTVRILEKAKKCICVELDPRMAAEVTKRVQGKPEQRKLEVLLGDVIKTELPAF 125
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+C++N PYQISSPL FKLL RC+++MFQ+EFA+RL A+PGD LYCRLSVN Q
Sbjct: 126 DVCISNTPYQISSPLVFKLLSLPNPPRCSVLMFQREFALRLTARPGDALYCRLSVNAQFW 185
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICFIRKNKTL-S 239
A+++H++KVGKNNFRPPP+V+SSVVRIEP+ K RP V+ EWDG LR+CF+RKNKTL +
Sbjct: 186 AKITHIMKVGKNNFRPPPQVESSVVRIEPKMGKDRPNVSWDEWDGLLRVCFVRKNKTLRA 245
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI-GTDTPSLGDSNGDQSMGVDDGSDD 298
S K VL+M+E+NYRT A+ + + I G + D +DG D
Sbjct: 246 SWLGTKEVLAMVERNYRTWCAMNG---VPIDESVIEGAEEEEDDMEMDDGGAAANDGEDA 302
Query: 299 EMDVED--DDGDS------------------DVEGEVSEF-KDKVLAVLRE-GQFEEKRA 336
MDV+D DD S + +V+E ++K+ VL + + +KR+
Sbjct: 303 GMDVDDLGDDTPSFFQELKTASASVPKTKSKRKKTKVAELVREKIRKVLEDVTELADKRS 362
Query: 337 SKLTQQEFLYLLSLFNKAGIHFS 359
K + +FL LL FN+ GIHFS
Sbjct: 363 GKCDENDFLRLLFAFNEEGIHFS 385
>gi|134057541|emb|CAK48895.1| unnamed protein product [Aspergillus niger]
Length = 319
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/328 (52%), Positives = 212/328 (64%), Gaps = 50/328 (15%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP + + IV KA +K +DV+LEIGPGTGNLT K+LE K VIAVELD RM E+
Sbjct: 39 GQHILKNPGVAQRIVDKAELKQSDVVLEIGPGTGNLTVKILEQAKKVIAVELDPRMAAEV 98
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP RL VI GDV+KTDLPYFD+C++N PYQISSPLTFKLL PA R ++M
Sbjct: 99 TKRVQGTPAQKRLDVILGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATSPAPRICVLM 158
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RL A+PGDKLY RLSVN Q+ A++ H++KVGKNNF+PPP V+SSVVR+ P+ P
Sbjct: 159 FQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVESSVVRLVPKNP 218
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQSSQNSSLGNTE 273
RPQ+N EWDG LRI F+RKNKT+ S F K+ V+ MLE NYRT A QN
Sbjct: 219 RPQINYDEWDGLLRILFVRKNKTIRSSFLGKSTVMDMLEANYRTWCA----QN------- 267
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQF 331
D+ G+V+E ++KV VL E +
Sbjct: 268 ------------------------------------DIPGKVAELVREKVRQVLEDETRL 291
Query: 332 EEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA + +FL LL FN+ G HFS
Sbjct: 292 ADKRARMCDENDFLKLLWAFNQKGFHFS 319
>gi|342181400|emb|CCC90879.1| conserved putative ribosomal RNA adenine dimethylase family protein
[Trypanosoma congolense IL3000]
Length = 344
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 233/354 (65%), Gaps = 48/354 (13%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIG 64
+IRK+ K SG + G G G+ F+K GQHILKNPL++ +IV+KA +K+TD++LEIG
Sbjct: 38 EIRKQTQKSTSGELKTGG-GQSGMVFNKGFGQHILKNPLVIAAIVEKAAVKATDIVLEIG 96
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGNLT+KLL+A K VIA E+D RMV+EL +RFQ++P + +L+V++G+ L + PYFD
Sbjct: 97 PGTGNLTEKLLQAAKKVIAFEVDPRMVVELNKRFQNSPLAAKLQVVRGNCLDHEFPYFDK 156
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
CVAN+PY ISS L FKLL +P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+QL AR
Sbjct: 157 CVANVPYAISSALVFKLL-KKPNFKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLAR 215
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
SHL+K+ +N+F PPPKV+SSV+R++P+ P P V+ EWDG +++ F RKNK +SSIFR
Sbjct: 216 CSHLMKISRNSFNPPPKVESSVIRLDPKHPPPSVDFDEWDGLVKLIFNRKNKKVSSIFRT 275
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
K+ +S+L + Y + Q ++ ++N SLG
Sbjct: 276 KSTVSVLYEKYCSYQKMEGAKN-----------IKSLG---------------------- 302
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
EFK+ + ++L+E F +KRA L + + LL F K GIHF
Sbjct: 303 ------------EFKEHLESILQEPLF-DKRARVLDEGSIMELLYCFTKNGIHF 343
>gi|255712883|ref|XP_002552724.1| KLTH0C11704p [Lachancea thermotolerans]
gi|238934103|emb|CAR22286.1| KLTH0C11704p [Lachancea thermotolerans CBS 6340]
Length = 322
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 162/330 (49%), Positives = 212/330 (64%), Gaps = 38/330 (11%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA IK +DV+LE+GPGTGNLT ++LE + VIAVE+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDVVLEVGPGTGNLTVRILEQARKVIAVEMDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R T +L ++ GD +KTDLPYFDIC++N PYQISSPL FKL+ R
Sbjct: 91 MGAELTKRVHGTAGEKKLDILLGDFMKTDLPYFDICISNTPYQISSPLVFKLINQPKPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVR+
Sbjct: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRL 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP+V EWDG LRI F+RKN+T+++ F+ VL +LEKNY+ A
Sbjct: 211 EIKNPRPKVEFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEKNYKAFLA--------- 261
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
+ G+ S VDD +DV K K+ VL+E
Sbjct: 262 --------------TTGNGSDMVDDTEKSMIDV---------------VKAKIETVLKET 292
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA K Q +FL LL F++ GIHF+
Sbjct: 293 GLSDKRAGKCDQTDFLKLLYAFHQVGIHFA 322
>gi|145545245|ref|XP_001458307.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426126|emb|CAK90910.1| unnamed protein product [Paramecium tetraurelia]
Length = 353
Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 226/348 (64%), Gaps = 12/348 (3%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
+ + F+KS GQHIL N +++ IV K+ I+ TD++LEIGPGTGNLT+ LL+ K VI
Sbjct: 5 VSKSNMVFNKSFGQHILINQQILQMIVDKSAIRPTDIVLEIGPGTGNLTELLLQRAKQVI 64
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
VE+D RMV+EL +RF+ + YS++ K+IQGD L +LP+FD+CVAN+PYQISSPL FKLL
Sbjct: 65 CVEIDPRMVIELTKRFKYSQYSDKFKLIQGDFLTAELPFFDLCVANVPYQISSPLVFKLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+P +RCA++MFQ+EFA RLVA+PG++LYCRLS N Q+ +RV HL+KVGKNNF+PPPKV
Sbjct: 125 AQRPLWRCAVLMFQQEFAFRLVAKPGNELYCRLSANVQMLSRVDHLMKVGKNNFKPPPKV 184
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQ 262
+SSVVRIEP+ P P +N +EWDG LRICF RKNK LS+IF+ K+VL LE N+ ++
Sbjct: 185 ESSVVRIEPKNPIPNINYIEWDGLLRICFNRKNKQLSAIFKNKSVLKTLEHNFHVIEQEG 244
Query: 263 SSQNSSLGNTE------------IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSD 310
N N + G D Q+ + S+ + D +++
Sbjct: 245 IKVNDPANNVKQLISSIMEEEDVKGKGKKDKKDKKDKQNQQKGEESESDDDEDNNQQPEK 304
Query: 311 VEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ + F+ K+ +L+ + R K+ FL LL N GIHF
Sbjct: 305 QQTTQNPFRLKINEILKSNDMFQMRPVKMDNDGFLQLLCAMNAQGIHF 352
>gi|397635583|gb|EJK71922.1| hypothetical protein THAOC_06596 [Thalassiosira oceanica]
Length = 340
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 225/341 (65%), Gaps = 42/341 (12%)
Query: 19 QGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG 78
+G G+ A ++ + S GQH LKNP +V +IV KA IK TD +LEIGPGTGN+T LL+
Sbjct: 42 KGGGVSANLVAPNTSLGQHFLKNPAVVTAIVAKAAIKPTDSVLEIGPGTGNMTVPLLQQS 101
Query: 79 KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLT 138
K V+A+E D+RMV E+ +R + T +LKVIQGD +KT P+FD+CVAN+PYQISS L
Sbjct: 102 KNVVAIEYDTRMVREVLKRVEGTSEERKLKVIQGDAIKTRFPFFDVCVANVPYQISSALV 161
Query: 139 FKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
FKLL H+P FRC+++MFQ+EFA+RL A+PG+ LYCRLSVNTQL A+V L+KVG+NNFRP
Sbjct: 162 FKLLSHRPMFRCSVMMFQEEFALRLTARPGEALYCRLSVNTQLLAKVDQLMKVGRNNFRP 221
Query: 199 PPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTL 258
PPKV+S VVRIE R P P V+ +EWDG +R+ F RKNKTL S+ K+ L ML++N RT
Sbjct: 222 PPKVESRVVRIELRNPPPPVDFIEWDGMIRLLFNRKNKTLRSVLMTKSTLKMLDENIRTH 281
Query: 259 QALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEF 318
+AL ++ DD D E+ D +E
Sbjct: 282 RAL-------------------------------NERKDDMCDDENKDARQIIE------ 304
Query: 319 KDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+V+A+ Q+++KRASKL +FL LL+ FNK G+HF+
Sbjct: 305 --QVVAM---EQWKDKRASKLDLDDFLSLLAEFNKRGVHFA 340
>gi|340515271|gb|EGR45526.1| dimethyladenosine transferase-like protein [Trichoderma reesei
QM6a]
Length = 326
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/365 (47%), Positives = 233/365 (63%), Gaps = 53/365 (14%)
Query: 7 RKEKGKQK---SGPYQ---GQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDV 59
+ EKGK+ SGPY+ G+ + F+ + GQHILKNP + ++IVQKA +K TD
Sbjct: 3 KAEKGKRNNASSGPYEKPSGKSSKTNNVFKFNTNFGQHILKNPGVSDAIVQKAFLKPTDT 62
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LE+GPGTGNLT ++LE K I VELD RM E+ +R Q P +L+V+ GDV+KT+L
Sbjct: 63 VLEVGPGTGNLTVRILEQAKKCICVELDPRMAAEVTKRVQGKPEQRKLEVLLGDVIKTEL 122
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P FD+C++N PYQISSPL FKLL RC+++MFQ+EFA+RL A+PGD LYCRLSVN
Sbjct: 123 PAFDVCISNTPYQISSPLVFKLLSMPNPPRCSVLMFQREFALRLTARPGDALYCRLSVNA 182
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICFIRKNKT 237
Q A+++H++KVGKNNFRPPP+V+SSVVRIEP+ K RP V+ EWDG LR+CF+RKNKT
Sbjct: 183 QFWAKITHIMKVGKNNFRPPPQVESSVVRIEPKMGKDRPNVSWDEWDGLLRVCFVRKNKT 242
Query: 238 L-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGS 296
L +S K VL+M+E+NYRT A+ GV
Sbjct: 243 LRASWLGTKEVLAMVERNYRTWCAMN----------------------------GVPI-- 272
Query: 297 DDEMDVEDDDGDSDVEGEVSEF-KDKVLAVLRE-GQFEEKRASKLTQQEFLYLLSLFNKA 354
D ++ +V+E ++K+ VL + + +KRASK + +FL +L FN+
Sbjct: 273 -----------DESLKTKVAELVREKIRKVLEDVTELADKRASKCDENDFLRMLFAFNEE 321
Query: 355 GIHFS 359
GIHFS
Sbjct: 322 GIHFS 326
>gi|294461690|gb|ADE76404.1| unknown [Picea sitchensis]
Length = 390
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 173/335 (51%), Positives = 224/335 (66%), Gaps = 10/335 (2%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
A I HKS+GQHIL NP +++SIV KAG++ TD +LEIGPGTGNLT +LL+A + VIAV
Sbjct: 66 APRIELHKSRGQHILTNPRVLKSIVDKAGVRETDTVLEIGPGTGNLTLELLQAARRVIAV 125
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E+D RM+ + +R Q T + RL++++GD+L+TDLP FDICVANIPYQISSPL FKLL
Sbjct: 126 EIDPRMIEAVHKRVQGTEMAQRLELVRGDILRTDLPSFDICVANIPYQISSPLIFKLLST 185
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
P FR A +M QKEF RLVA+PGD L+ RL+VN L A L+ V K +F P PKVDS
Sbjct: 186 MPKFRNATLMLQKEFGRRLVAKPGDSLFNRLAVNVDLLASAKLLMDVSKRDFTPCPKVDS 245
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
SVVRIEPR P V+ EW+ F +CF RKNKTL +IFR K + L K Q
Sbjct: 246 SVVRIEPRAWPPPVDLSEWNRFTLMCFTRKNKTLGAIFRQKKTVFCLMKKAELWHEKQKL 305
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
+ S +I +D LG+ + D +++DVE D D E V FK+K++
Sbjct: 306 KGSHDNLEKIVSDLSLLGE------LDDDTTDTEDIDVE---SDRDNEKFVC-FKEKIVN 355
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L+ G +E+KR+SKL+ +EFL L+SLFNK GIHFS
Sbjct: 356 ILKSGGYEDKRSSKLSVKEFLRLISLFNKEGIHFS 390
>gi|440640762|gb|ELR10681.1| dimethyladenosine transferase [Geomyces destructans 20631-21]
Length = 390
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/412 (42%), Positives = 239/412 (58%), Gaps = 79/412 (19%)
Query: 4 GKIR--KEKGKQKSGPYQGQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
GK++ K S PY+ + F+ + GQHILKNP + E+IVQKA +K +DV+
Sbjct: 2 GKLKGGKRNSAATSSPYEKAAKQTNNVFKFNTNVGQHILKNPGVAEAIVQKADLKPSDVV 61
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LE+GPGTGNLT ++LE + VIAVELD RM E+ +R Q TP RL V+ GDV+KT+LP
Sbjct: 62 LEVGPGTGNLTVRILEKARKVIAVELDPRMAAEVTKRVQGTPMQKRLDVLLGDVIKTELP 121
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
FD+C++N PYQISSPL FKLL R +I+MFQ+EFA+RL A+PGD LYCRLSVN Q
Sbjct: 122 PFDVCISNTPYQISSPLVFKLLSLPNPPRTSILMFQREFALRLTARPGDALYCRLSVNAQ 181
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICFIRKNKTL 238
AR++H++KVGKNNF+PPP+V+SSVVRIEP+ RP V+ EWDG LR+CF+RKN+ +
Sbjct: 182 FWARITHIMKVGKNNFKPPPQVESSVVRIEPKTGSDRPGVSWEEWDGMLRVCFVRKNRLM 241
Query: 239 SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDD 298
+ + K VL+++E+NYR A+ D P GV DG D+
Sbjct: 242 RASWSGKEVLALVERNYRVWCAMN--------------DVP--------LEEGVVDGEDE 279
Query: 299 EMDVEDDDGDSDVEGE------------------------VSEFKD-------------- 320
EMD+ D G + E + S FK+
Sbjct: 280 EMDI-GDSGPAQEEWDGIMDVDGDGDIDGGADDAGEDDDTPSFFKELAAKSAATPQKTKS 338
Query: 321 -------------KVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K++ VL E + ++RA+K + +FL LL+ FN G+HF+
Sbjct: 339 KRPKTRVAALVRSKIMRVLEETELADRRAAKCDENDFLRLLAGFNAEGLHFA 390
>gi|358367586|dbj|GAA84204.1| dimethyladenosine transferase dimethyltransferase [Aspergillus
kawachii IFO 4308]
Length = 387
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 225/363 (61%), Gaps = 52/363 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP + + IV KA +K +DV+LEIGPGTGNLT K+LE K VIAVELD RM E+
Sbjct: 39 GQHILKNPGVAQRIVDKAELKQSDVVLEIGPGTGNLTVKILEQAKKVIAVELDPRMAAEV 98
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP RL VI GDV+KTDLPYFD+C++N PYQISSPLTFKLL PA R ++M
Sbjct: 99 TKRVQGTPAQKRLDVILGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATSPAPRICVLM 158
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RL A+PGDKLY RLSVN Q+ A++ H++KVGKNNF+PPP V+SSVVR+ P+ P
Sbjct: 159 FQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVESSVVRLVPKNP 218
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQSSQNSSLGNTE 273
RPQ+N EWDG LRI F+RKNKT+ S F K+ V+ MLE NYRT A QN
Sbjct: 219 RPQINYDEWDGLLRILFVRKNKTIRSSFLGKSTVMDMLEANYRTWCA----QN------- 267
Query: 274 IGTDTP-SLGDSNGDQSMGVDDGSDDE--------------------------------- 299
D P G + G +S +D G+ +
Sbjct: 268 ---DIPVEDGPAEGAESDAMDIGNAQDEEDDEGEDEPDEGMDVDDEDDVPDFFKEQTNAR 324
Query: 300 -MDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKRASKLTQQEFLYLLSLFNKAGI 356
+ + +G+V+E ++KV VL E + +KRA + +FL LL FN+ G
Sbjct: 325 IQEALKNRPSRKKKGKVAELVREKVRQVLEDETRLADKRARMCDENDFLKLLWAFNQKGF 384
Query: 357 HFS 359
HFS
Sbjct: 385 HFS 387
>gi|317027289|ref|XP_001400595.2| dimethyladenosine transferase [Aspergillus niger CBS 513.88]
Length = 387
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 225/363 (61%), Gaps = 52/363 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP + + IV KA +K +DV+LEIGPGTGNLT K+LE K VIAVELD RM E+
Sbjct: 39 GQHILKNPGVAQRIVDKAELKQSDVVLEIGPGTGNLTVKILEQAKKVIAVELDPRMAAEV 98
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP RL VI GDV+KTDLPYFD+C++N PYQISSPLTFKLL PA R ++M
Sbjct: 99 TKRVQGTPAQKRLDVILGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATSPAPRICVLM 158
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RL A+PGDKLY RLSVN Q+ A++ H++KVGKNNF+PPP V+SSVVR+ P+ P
Sbjct: 159 FQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVESSVVRLVPKNP 218
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQSSQNSSLGNTE 273
RPQ+N EWDG LRI F+RKNKT+ S F K+ V+ MLE NYRT A QN
Sbjct: 219 RPQINYDEWDGLLRILFVRKNKTIRSSFLGKSTVMDMLEANYRTWCA----QN------- 267
Query: 274 IGTDTP-SLGDSNGDQSMGVDDGSDDE--------------------------------- 299
D P G + G +S +D G+ +
Sbjct: 268 ---DIPVEDGPAEGAESDAMDIGNAQDEDDDEGEDEPDEGMDVDDEDDVPDFFKEQTNAR 324
Query: 300 -MDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKRASKLTQQEFLYLLSLFNKAGI 356
+ + +G+V+E ++KV VL E + +KRA + +FL LL FN+ G
Sbjct: 325 IQEALKNRPSRKKKGKVAELVREKVRQVLEDETRLADKRARMCDENDFLKLLWAFNQKGF 384
Query: 357 HFS 359
HFS
Sbjct: 385 HFS 387
>gi|453084962|gb|EMF13006.1| dimethyladenosine transferase [Mycosphaerella populorum SO2202]
Length = 385
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/374 (46%), Positives = 234/374 (62%), Gaps = 25/374 (6%)
Query: 11 GKQKSGPYQG--------QGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
G KS PY G F+ GQHILKNP + ++IV KA +K +D++LE
Sbjct: 12 GISKSDPYAGATARKAKSTATANSIFKFNTDLGQHILKNPGVAQAIVDKADVKQSDIVLE 71
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD-LPY 121
IGPGTGNLT ++LE K VIAVE+D RM EL +RFQ TP + +L+++ GDV+K + LPY
Sbjct: 72 IGPGTGNLTTRILEKAKRVIAVEMDPRMAAELTKRFQGTPAAKKLEIVLGDVIKMEKLPY 131
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FDIC++N PYQISSPLTFKLL P+ R ++MFQ+EFAMRL A+PGDKLY RLSVN Q+
Sbjct: 132 FDICISNTPYQISSPLTFKLLATSPSPRSCVLMFQREFAMRLFAKPGDKLYSRLSVNCQM 191
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
A+V H++KVG+NNF PPP+V+S+VVRI P+ PRPQ++ EWDG LR+CF+RKNK L S
Sbjct: 192 WAKVDHVMKVGRNNFNPPPQVESNVVRISPKNPRPQISYEEWDGLLRVCFVRKNKVLRSE 251
Query: 242 FR-LKNVLSMLEKNYRTLQA----------LQSSQNSSLGNTEIGTDTPSLGDSNGDQSM 290
F +V+ ML NYRT + ++ + + E+ + + D
Sbjct: 252 FLGTTSVMDMLTSNYRTYCSQNGIELDDGPVEGGGDDMDVDGEVEEEEEMDIAMDMDDED 311
Query: 291 GVDDGSDDEMDVE----DDDGDSDVEGEVSEF-KDKVLAVLREGQFEEKRASKLTQQEFL 345
V D +EMD D+ + +G+V+E + KV VL E +KR+ + +FL
Sbjct: 312 DVPDFFKEEMDKRAKKTADNPNRKKKGKVAELVRSKVKKVLEENDLADKRSRMCDEGDFL 371
Query: 346 YLLSLFNKAGIHFS 359
LL FNK IHF+
Sbjct: 372 KLLYGFNKENIHFA 385
>gi|363750244|ref|XP_003645339.1| hypothetical protein Ecym_3003 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888973|gb|AET38522.1| Hypothetical protein Ecym_3003 [Eremothecium cymbalariae
DBVPG#7215]
Length = 319
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 167/357 (46%), Positives = 217/357 (60%), Gaps = 45/357 (12%)
Query: 8 KEKGKQKSGPYQGQGLGA-----GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
K K SG G+ + A F+ GQHILKNPL+ + IV KA IK +D++LE
Sbjct: 3 KASKKSYSGTSNGKEVAAEKHLNAVFKFNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLE 62
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPGTGNLT ++LE + V+AVE D RM EL +R T +L++I GD KT+LPYF
Sbjct: 63 VGPGTGNLTTRILEKARKVVAVEFDPRMAAELTKRVHGTAAEKKLEIILGDFTKTELPYF 122
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+C++N PYQISSPL FKL+ R +I+MFQ+EFAMRL+A+PGD LYCRLS N Q+
Sbjct: 123 DVCISNTPYQISSPLVFKLINQPRPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMW 182
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
A V H++KVGKNNFRPPP+V+SSVVRIE + PRPQV+ EWDG LRI F+RKN+T+++ F
Sbjct: 183 ANVMHIMKVGKNNFRPPPQVESSVVRIEIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGF 242
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDV 302
+ VL +LEKNY+ A +S N DV
Sbjct: 243 KSTTVLEILEKNYK---AFLASTN----------------------------------DV 265
Query: 303 EDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DD + V + K+ VL + EKRA K Q +FL LL F++ GIHFS
Sbjct: 266 IADDTKGSMADAV---RQKITTVLEQTGLGEKRAGKCDQTDFLKLLYAFHQVGIHFS 319
>gi|332021836|gb|EGI62176.1| Putative dimethyladenosine transferase [Acromyrmex echinatior]
Length = 266
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 159/311 (51%), Positives = 205/311 (65%), Gaps = 46/311 (14%)
Query: 48 IVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRL 107
+V+KA ++ TDV+LEIGPGTGN+T K+LE K V+A E+D RM+ ELQ+R Q T + ++L
Sbjct: 1 MVEKAALRPTDVVLEIGPGTGNMTVKMLEKAKKVVACEIDPRMIAELQKRVQGTIHQSKL 60
Query: 108 KVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQP 167
+++ GDVLK+DLP+FD+CVANIPYQISSPL FKLL H+P FRCA++MFQ+EFA RLVA+P
Sbjct: 61 QIVYGDVLKSDLPFFDLCVANIPYQISSPLVFKLLSHRPLFRCAVLMFQREFAERLVAKP 120
Query: 168 GDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL 227
GDKLYCRLS+NTQL ARV L+KVGKNNFRPPPKV+S+VVRIEPR P P +N EWDG
Sbjct: 121 GDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESNVVRIEPRNPPPPINYQEWDGLT 180
Query: 228 RICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGD 287
RI F+RKNKTLS+ F+ V++MLEKNY+ + SL N +
Sbjct: 181 RIAFVRKNKTLSAAFKQTTVVTMLEKNYKI--------HCSLNNKIVS------------ 220
Query: 288 QSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYL 347
D D+ K + VL + + KRA + +F+ L
Sbjct: 221 ----------DNFDI----------------KQLIDHVLEKADAKNKRARTMDIDDFISL 254
Query: 348 LSLFNKAGIHF 358
L FN G+HF
Sbjct: 255 LHAFNAEGVHF 265
>gi|258574477|ref|XP_002541420.1| dimethyladenosine transferase [Uncinocarpus reesii 1704]
gi|237901686|gb|EEP76087.1| dimethyladenosine transferase [Uncinocarpus reesii 1704]
Length = 349
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 162/311 (52%), Positives = 209/311 (67%), Gaps = 13/311 (4%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGIS----FHKSKGQHILKNPLLVESIVQKAGIKS 56
M +K K+GPY + + GQH+LKNP + ++IV KA +K
Sbjct: 1 MPKAPQKKRNSAGKAGPYAHAAAKTNAANSIFRMNTDIGQHVLKNPGVAQAIVDKADLKQ 60
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
+DV+LE+GPG+GNLT K+LE K V+AVELD RM E+ +R Q TP RL+V+ GDV+K
Sbjct: 61 SDVVLEVGPGSGNLTVKILEKAKKVVAVELDPRMAAEVTKRVQGTPEQKRLEVLLGDVIK 120
Query: 117 TDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS 176
TDLPYFD+C++N PYQISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLS
Sbjct: 121 TDLPYFDVCISNTPYQISSPLTFKLLATTPAPRVCILMFQREFAMRLFAKPGDKLYSRLS 180
Query: 177 VNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNK 236
VN Q+ A++ H++KVGKNNF+PPP V+SSVVRI P+ PRP ++ EWDG LR+ F+RKNK
Sbjct: 181 VNAQMWAKIDHIMKVGKNNFKPPPAVESSVVRIVPKVPRPDISYDEWDGLLRVAFVRKNK 240
Query: 237 TL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDG 295
TL SS +VL+MLE NY T A Q+ +G E G D +GD D +
Sbjct: 241 TLRSSFLGTSSVLNMLESNYTTWCA-QNDIPVEVGPEEDGEDE-VMGDDQEDADL----- 293
Query: 296 SDDEMDVEDDD 306
D+ MDV+DD+
Sbjct: 294 -DELMDVDDDE 303
>gi|406860639|gb|EKD13696.1| dimethyladenosine transferase dimethyltransferase [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 382
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 172/354 (48%), Positives = 231/354 (65%), Gaps = 27/354 (7%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNP + E+IV KA +K TDV+LE+GPGTGNLT ++LE K VIAVELD R
Sbjct: 32 FNTNVGQHILKNPGVAEAIVAKANLKPTDVVLEVGPGTGNLTVRILEKAKKVIAVELDPR 91
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M E+ +R Q P RL+V+ GDV+KT+LP+FD+C++N PYQISSPL FKLL R
Sbjct: 92 MAAEVTKRVQGKPEQKRLEVLLGDVIKTELPHFDVCISNTPYQISSPLVFKLLALPNPPR 151
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFA+RL A+PGD LYCRLSVN Q ++++H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 152 TSILMFQREFALRLTARPGDPLYCRLSVNAQFFSKITHIMKVGKNNFRPPPQVESSVVRI 211
Query: 210 EPR--KPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQN 266
EP+ RP V+ EWDG LRICF+RKN+T+ +S K VL+MLE+NY+ S+
Sbjct: 212 EPKMGAERPGVSWDEWDGMLRICFVRKNRTMRASWLGTKEVLAMLERNYKV---WCSANQ 268
Query: 267 SSLGNTEIGTDTPSLGDSNGDQS-------MGVDDGSDDEMDVEDDDGDSDVE------- 312
+ +TEIG D + +G+ M VD+ DD + +
Sbjct: 269 IPVDDTEIGEDEEMETEMDGEGEEAEWGGIMDVDEEEDDTPSFFKEQAKRATQESGGKTK 328
Query: 313 -----GEVSEF-KDKVLAVLRE-GQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
V+E K+K+ VL + + +KRA K + +FL LLS FN GIHF+
Sbjct: 329 SKKKKTRVAELVKEKIRKVLEDVTELADKRAGKCDENDFLRLLSAFNDEGIHFA 382
>gi|425766216|gb|EKV04840.1| Dimethyladenosine transferase [Penicillium digitatum PHI26]
gi|425779138|gb|EKV17227.1| Dimethyladenosine transferase [Penicillium digitatum Pd1]
Length = 404
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 176/401 (43%), Positives = 236/401 (58%), Gaps = 53/401 (13%)
Query: 11 GKQKSGPYQGQGLGAGG---------ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
KQK QGL + GQH+LKNP + +IV+KA +K +D++L
Sbjct: 5 NKQKRNSAASQGLSDAAAKTKAAHSIFKMNTDIGQHVLKNPGIAAAIVEKAELKQSDIVL 64
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
EIGPGTGNLT K+LE K IAVELD RM E+ +RFQSTPY RL+VI GDV+KT+LPY
Sbjct: 65 EIGPGTGNLTAKILEKAKKCIAVELDPRMAAEVTKRFQSTPYQKRLEVILGDVMKTELPY 124
Query: 122 FDICVANIPYQ------------------ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRL 163
FD+C++N PYQ ISSPLTFKLL PA R ++MFQ+EFA+RL
Sbjct: 125 FDVCISNTPYQVQNPISPSNAVPESNKVKISSPLTFKLLATSPAPRSCVLMFQREFALRL 184
Query: 164 VAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEW 223
A+PGDKLY RLSVN Q+ A++ H++KVGKNNF+PPP+V+SSV+R+ P+ PRPQ+N EW
Sbjct: 185 FAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPQVESSVIRMVPKNPRPQINYEEW 244
Query: 224 DGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLG 282
DG LRI F+RKNKTL SS +++ +LE NYRT A Q+ G E+ D
Sbjct: 245 DGLLRIVFVRKNKTLRSSFIGTTSIMELLEANYRTWCA-QNDIPVEDGPVEVVNDNAMAM 303
Query: 283 DSNGDQSMG---------------------VDDGSDDEMDVEDDDGDS-DVEGEVSEF-K 319
D + +Q + ++ ++ +G S +V+E +
Sbjct: 304 DMDEEQEEEQAVEEPVDEVMDMDDDDVPDFFKESTNARLEAALKNGASRKKRSKVAELVR 363
Query: 320 DKVLAVLR-EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KV VL + E+RA + +FL LL FN+ GIHF+
Sbjct: 364 EKVRQVLEDDTDLGERRARMCDENDFLKLLWAFNQKGIHFN 404
>gi|224001108|ref|XP_002290226.1| dimethyladenosine transferase [Thalassiosira pseudonana CCMP1335]
gi|220973648|gb|EED91978.1| dimethyladenosine transferase [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/336 (50%), Positives = 220/336 (65%), Gaps = 45/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
G I+ + S GQH LKNP +V +IV KAG+K TD ILEIGPGTGN+T LL+ K V+A
Sbjct: 45 GTNLIAPNTSLGQHFLKNPAVVTAIVAKAGLKPTDSILEIGPGTGNMTVPLLQQSKSVVA 104
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
+E D+RMV E+ +R + T +LKVIQGD +KT P+FD+CVAN+PYQISS L FKLL
Sbjct: 105 IEYDTRMVREVLKRVEGTSEERKLKVIQGDAIKTRFPFFDVCVANVPYQISSALVFKLLS 164
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCA++MFQ+EFA+RL A+PG+ LYCRLSVNTQL A+V L+KVG+NNFRPPPKV+
Sbjct: 165 HRPMFRCAVMMFQEEFALRLTARPGEALYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVE 224
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
S VVRIE R P P VN EWDG +R+ F RKNKTL S+ K + ML++N RT +AL
Sbjct: 225 SRVVRIELRNPPPPVNFTEWDGMIRLLFNRKNKTLRSVLMTKPTIKMLDENMRTQRAL-- 282
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
NG SM ++ + D++ +ED
Sbjct: 283 ---------------------NG-ASMNTENKTADQI-IED------------------- 300
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
V+ Q+++KRASKL +FL LL+ FNK GIHF+
Sbjct: 301 -VVAMEQWKDKRASKLDLDDFLALLAEFNKRGIHFA 335
>gi|378734187|gb|EHY60646.1| dimethyladenosine transferase [Exophiala dermatitidis NIH/UT8656]
Length = 391
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/350 (47%), Positives = 222/350 (63%), Gaps = 28/350 (8%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQH+LKNP + ++IV KA +K +D++LE+GPG+GNLT K+LE K IAVELD RM E+
Sbjct: 43 GQHVLKNPGVAQAIVDKADLKQSDIVLEVGPGSGNLTVKILEKAKKCIAVELDPRMAAEV 102
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP RL V+ GDV+KTDLPYFD+C++N PYQISSPLTFKLL PA R I+M
Sbjct: 103 TKRVQGTPQGKRLDVVLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATSPAPRVCILM 162
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMRL A+PG KLY RLSVN Q+ A++ H++KVGKNNF+PPP V+SSV+R+ P+ P
Sbjct: 163 FQREFAMRLFAKPGGKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPAVESSVIRMVPKNP 222
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFR-LKNVLSMLEKNYRTLQA----------LQS 263
RP ++ EWDG LRICF+RKNKTL + F +++++LE NYRT A +
Sbjct: 223 RPNISYEEWDGLLRICFVRKNKTLRANFLGTTSIMNILEANYRTWCAQNDVPLEEGPAED 282
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMG-------------VDDGSDDEMDVEDDDGDSD 310
Q G E + P+ D D M D + +
Sbjct: 283 DQMEVEG--EDAQEDPAGEDDTWDGLMDVDADEDGDDLPAFFKDQQSSLLKAAAKGSNRK 340
Query: 311 VEGEVSEF-KDKVLAVLRE-GQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+G+V+E ++KV +VL + Q +KRA + +FL LL FN+ GIHF
Sbjct: 341 RKGKVAELVREKVRSVLEDKTQLADKRARMCDEGDFLKLLWNFNQEGIHF 390
>gi|315050182|ref|XP_003174465.1| dimethyladenosine transferase dimethyltransferase [Arthroderma
gypseum CBS 118893]
gi|311339780|gb|EFQ98982.1| dimethyladenosine transferase dimethyltransferase [Arthroderma
gypseum CBS 118893]
Length = 377
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/384 (46%), Positives = 233/384 (60%), Gaps = 45/384 (11%)
Query: 7 RKEKGKQKSGPYQ---GQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
++ Q S PY + A I + GQH+LKNP + ++IV KA +K +D +LE
Sbjct: 8 KRNNAAQASSPYAQAVAKTKAAHNIFRMNTDIGQHVLKNPGVAQAIVDKADLKQSDTVLE 67
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPG+GNLT K+LE K VIAVELD RM EL +R Q P RL+V+ GDV+KT++PYF
Sbjct: 68 VGPGSGNLTVKILEKAKKVIAVELDPRMAAELTKRVQGKPEQKRLEVLLGDVMKTEVPYF 127
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+C++N PYQISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN Q+
Sbjct: 128 DVCISNTPYQISSPLTFKLLATTPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMW 187
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSI 241
A++ H++KVGKNNF+PPP V+SSVVRI P+ PRP ++ EWDG LRI F+RKNKTL SS
Sbjct: 188 AKIDHIMKVGKNNFKPPPAVESSVVRIVPKVPRPDISYEEWDGLLRIAFVRKNKTLRSSF 247
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSM----------- 290
+V+SMLE NY T A QN N I +D +GDQ M
Sbjct: 248 LGTTSVVSMLEANYCTWCA----QN----NIPIDSDL-----QDGDQQMISEEDDQVEEE 294
Query: 291 -------------GVDDGSDDEMDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKR 335
++ + + G + G+V+ ++K+ VL + + +KR
Sbjct: 295 VDEVMEVDDEDDVPDFFKTEKDQTTAPNHGPTK-RGKVTNLVREKIRQVLEDDTKLADKR 353
Query: 336 ASKLTQQEFLYLLSLFNKAGIHFS 359
A + EFL LL FN+ GIHFS
Sbjct: 354 ARMCDEGEFLKLLWAFNQKGIHFS 377
>gi|407417208|gb|EKF38008.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi marinkellei]
Length = 344
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/337 (47%), Positives = 218/337 (64%), Gaps = 47/337 (13%)
Query: 22 GLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMV 81
G G+ F+K GQHILKNPL++ +IV+KA IK TDV+LEIGPGTGNLT+KLL+A K V
Sbjct: 54 GGSQSGMVFNKGFGQHILKNPLVIAAIVEKAAIKPTDVVLEIGPGTGNLTEKLLQASKKV 113
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKL 141
IA E+DSRMV EL +RFQ+TP +++L+VI+G+ L + PYFD CVAN+PY ISS L FKL
Sbjct: 114 IAFEVDSRMVAELNKRFQNTPLASKLQVIRGNCLDHEFPYFDKCVANVPYAISSALVFKL 173
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L +P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+QL AR SHL+K+ KN+F PPPK
Sbjct: 174 L-RKPTFKCAVLMFQREFALRVCAQPGAEAYCRLSVNSQLLARCSHLMKISKNSFNPPPK 232
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL 261
V+SSV+R++P+ P P V+ EWDG +++ F RKNK +SSIFR KN + L + Y + Q +
Sbjct: 233 VESSVIRLDPKHPAPDVDFEEWDGLVKLIFNRKNKKVSSIFRTKNAVQTLYEKYCSYQKM 292
Query: 262 QSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDK 321
+ G T + + ++EFK+
Sbjct: 293 E-------GTTSVKS--------------------------------------LAEFKEH 307
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ V+++ FE RA L Q+ LL F GIHF
Sbjct: 308 LETVMQDPVFES-RARLLDQETITKLLCHFTANGIHF 343
>gi|374106635|gb|AEY95544.1| FACR026Wp [Ashbya gossypii FDAG1]
Length = 319
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/331 (48%), Positives = 215/331 (64%), Gaps = 42/331 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + V+AVE D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEFDPR 89
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KT+LPYFDIC++N PYQISSPL FKL+ R
Sbjct: 90 MAAELTKRVHGTPAEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H++KVG+NNFRPPP+V+SSVVRI
Sbjct: 150 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHVMKVGRNNFRPPPQVESSVVRI 209
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP V+ EWDG LRI F+RKN+T+S+ F+ VL ++EKNY+ A ++ N ++
Sbjct: 210 EIKNPRPPVDFNEWDGLLRIVFVRKNRTISAGFKSTAVLEIMEKNYK---AYLATTNDAM 266
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSE-FKDKVLAVLRE 328
VDD +G ++E K K+ VL E
Sbjct: 267 ----------------------VDDA----------------KGSLAEQVKQKIETVLAE 288
Query: 329 GQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA K Q +FL LL F++ G+HFS
Sbjct: 289 TGLSDKRAGKCDQTDFLKLLYAFHQVGLHFS 319
>gi|45185713|ref|NP_983429.1| ACR026Wp [Ashbya gossypii ATCC 10895]
gi|52782780|sp|Q75C90.1|DIM1_ASHGO RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|44981468|gb|AAS51253.1| ACR026Wp [Ashbya gossypii ATCC 10895]
Length = 319
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/331 (48%), Positives = 215/331 (64%), Gaps = 42/331 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + V+AVE D R
Sbjct: 30 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEFDPR 89
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KT+LPYFDIC++N PYQISSPL FKL+ R
Sbjct: 90 MAAELTKRVHGTPAEKKLEIMLGDFMKTELPYFDICISNTPYQISSPLVFKLINQPRPPR 149
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H++KVG+NNFRPPP+V+SSVVRI
Sbjct: 150 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHVMKVGRNNFRPPPQVESSVVRI 209
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP V+ EWDG LRI F+RKN+T+S+ F+ VL ++EKNY+ A ++ N ++
Sbjct: 210 EIKTPRPPVDFNEWDGLLRIVFVRKNRTISAGFKSTAVLEIMEKNYK---AYLATTNDAM 266
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSE-FKDKVLAVLRE 328
VDD +G ++E K K+ VL E
Sbjct: 267 ----------------------VDDA----------------KGSLAEQVKQKIETVLAE 288
Query: 329 GQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA K Q +FL LL F++ G+HFS
Sbjct: 289 TGLSDKRAGKCDQTDFLKLLYAFHQVGLHFS 319
>gi|296813149|ref|XP_002846912.1| dimethyladenosine transferase dimethyltransferase [Arthroderma otae
CBS 113480]
gi|238842168|gb|EEQ31830.1| dimethyladenosine transferase dimethyltransferase [Arthroderma otae
CBS 113480]
Length = 376
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/372 (47%), Positives = 228/372 (61%), Gaps = 22/372 (5%)
Query: 7 RKEKGKQKSGPYQ---GQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
++ Q S PY + A I + GQH+LKNP + ++IV KA +K +D +LE
Sbjct: 8 KRNNAAQASSPYAQAVAKTKAAHNIFRMNTDIGQHVLKNPGVAQAIVDKADLKQSDTVLE 67
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPG+GNLT K+LE K VIAVELD RM EL +R Q P RL+V+ GDV+KT++PYF
Sbjct: 68 VGPGSGNLTVKILEKAKKVIAVELDPRMAAELTKRVQGKPEQKRLEVLLGDVMKTEVPYF 127
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+C++N PYQISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN Q+
Sbjct: 128 DVCISNTPYQISSPLTFKLLATTPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMW 187
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSI 241
A++ H++KVGKNNF+PPP V+SSVVRI P+ PRP ++ EWDG LRI F+RKNKTL SS
Sbjct: 188 AKIDHIMKVGKNNFKPPPAVESSVVRIVPKVPRPDISYEEWDGLLRIAFVRKNKTLRSSF 247
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDD-----GS 296
+V+SMLE NY T A N + D + + + VD+
Sbjct: 248 LGTSSVVSMLEANYCTWCA---QNNIPIDADLQDDDQQMITEEDNQVEEDVDEMMEVDDE 304
Query: 297 DDEMDVEDDDGDSDVEGEVSEFKDKVLAVLRE---------GQFEEKRASKLTQQEFLYL 347
DD D + + VS + KV +++RE +KRA + EFL L
Sbjct: 305 DDVPDFFKTEKEQTAPKVVSTKRGKVTSLVREKIRQILEDDTGLADKRARMCDEGEFLKL 364
Query: 348 LSLFNKAGIHFS 359
L FN+ GIHFS
Sbjct: 365 LWAFNQKGIHFS 376
>gi|323449377|gb|EGB05265.1| hypothetical protein AURANDRAFT_60268 [Aureococcus anophagefferens]
Length = 312
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/352 (47%), Positives = 224/352 (63%), Gaps = 43/352 (12%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K K + G + +G + ++ +K GQ+ LKNP +V++IV++A ++ TD +LEIGPGT
Sbjct: 3 KRKRDEARGGGEERGASSHLLAANKDLGQNFLKNPAIVDAIVERAKLQPTDSVLEIGPGT 62
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GNLT KLL K + VE D RMV E+ +R ++ P +RL+++ GDVLK LPYFD+CVA
Sbjct: 63 GNLTVKLLAQAKKLTCVEFDRRMVREVAKRVENDPRKHRLEMVHGDVLKVALPYFDVCVA 122
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PY ISSP FKLL H+P FR A+IMFQ+EFA RL A+PGD LYCRLSVNTQL A+V+
Sbjct: 123 NLPYNISSPFLFKLLAHRPHFRSAVIMFQEEFAQRLSAKPGDALYCRLSVNTQLLAKVTQ 182
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
L+KVG+NNFRPPPKVDS VV+IE R P P VN VEWDG +++CF RKNKTL S F K
Sbjct: 183 LIKVGRNNFRPPPKVDSRVVKIEVRNPPPPVNFVEWDGLVKLCFNRKNKTLRSTFTNKKT 242
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
L+ LE +++T +AL SM D + D DV
Sbjct: 243 LADLETSWKTFRAL---------------------------SMTDADEAADAPDV----- 270
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K V A++ + +F++KRA+K+ +FL LL FN+ G+HFS
Sbjct: 271 -----------KALVEAIMEDPRFKDKRAAKMDLDDFLALLVAFNEKGLHFS 311
>gi|71425341|ref|XP_813086.1| ribosomal RNA adenine dimethylase family protein [Trypanosoma cruzi
strain CL Brener]
gi|70877938|gb|EAN91235.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi]
Length = 344
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 225/359 (62%), Gaps = 54/359 (15%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGG----ISFHKSKGQHILKNPLLVESIVQKAGIKSTDV 59
GK K +KS GL GG + F+K GQHILKNPL++ +IV+KA IK TDV
Sbjct: 35 GKPAARKASKKSAMV---GLKTGGSQSGMVFNKGFGQHILKNPLVIAAIVEKAAIKPTDV 91
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIGPGTGNLT+KLL+A K VIA E+DSRMV EL +RFQ+TP +++L+VI+G+ L +
Sbjct: 92 VLEIGPGTGNLTEKLLQASKKVIAFEVDSRMVAELNKRFQNTPLASKLQVIRGNCLDHEF 151
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFD CVAN+PY ISS L FKLL +P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+
Sbjct: 152 PYFDKCVANVPYAISSALVFKLL-RKPTFKCAVLMFQREFALRVCAQPGAEAYCRLSVNS 210
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL AR SHL+K+ KN+F PPPKV+SSV+R++P+ P P V+ EWDG ++ F RKNK +S
Sbjct: 211 QLLARCSHLMKISKNSFNPPPKVESSVIRLDPKHPAPDVDFEEWDGLVKFIFNRKNKKVS 270
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
SIFR KN + L + Y + Q ++ G T + +
Sbjct: 271 SIFRTKNAVQTLYEKYCSYQKME-------GKTSVKS----------------------- 300
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
++EFK+ + V+++ FE RA L Q LL F + GIHF
Sbjct: 301 ---------------LAEFKEHLETVMQDPVFES-RARLLDQDSITKLLCHFTENGIHF 343
>gi|358387929|gb|EHK25523.1| hypothetical protein TRIVIDRAFT_177538 [Trichoderma virens Gv29-8]
Length = 385
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/384 (45%), Positives = 241/384 (62%), Gaps = 35/384 (9%)
Query: 7 RKEKGKQKSGPYQGQGLGAGG-----ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
R ++ SGPY+ GA F+ + GQHILKNP + ++IV+KA +K TD +L
Sbjct: 6 RSKRNNASSGPYEKPS-GASSKTNNVFKFNTNFGQHILKNPGVSDAIVEKAFLKPTDTVL 64
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
E+GPGTGNLT ++LE K I VELD RM E+ +R Q P +L+V+ GDV+KT+LP
Sbjct: 65 EVGPGTGNLTVRILERAKKCICVELDPRMAAEVTKRVQGKPEQRKLEVLLGDVIKTELPA 124
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FD+C++N PYQISSPL FKLL RC+++MFQ+EFA+RL A+PGD LYCRLSVN Q
Sbjct: 125 FDVCISNTPYQISSPLVFKLLSLPNPPRCSVLMFQREFALRLTARPGDALYCRLSVNAQF 184
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICFIRKNKTL- 238
A+++H++KVGKNNFRPPP+V+SSVVRIEP+ K RP V+ EWDG LR+CF+RKNKTL
Sbjct: 185 WAKITHIMKVGKNNFRPPPQVESSVVRIEPKMGKDRPNVSWDEWDGLLRVCFVRKNKTLR 244
Query: 239 SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDD 298
+S K VL+M+E+NYRT A+ + + + D++ D G +D D
Sbjct: 245 ASWLGTKEVLAMVERNYRTWCAMNG---VPIDESIVEGGADDEDDNDMDMDEGANDAEDA 301
Query: 299 EM---------------DVEDDDGDS------DVEGEVSEF-KDKVLAVLRE-GQFEEKR 335
M D++ ++ + +V+E ++K+ VL + + +KR
Sbjct: 302 GMDVDDDADEDTPSFFKDLKSAGANAPKTKSKRKKTKVAELVREKIRKVLEDVTELADKR 361
Query: 336 ASKLTQQEFLYLLSLFNKAGIHFS 359
A K + +FL LL FN+ GIHFS
Sbjct: 362 AGKCDENDFLRLLFAFNEEGIHFS 385
>gi|341879448|gb|EGT35383.1| hypothetical protein CAEBREN_28911 [Caenorhabditis brenneri]
gi|341882294|gb|EGT38229.1| hypothetical protein CAEBREN_11925 [Caenorhabditis brenneri]
Length = 308
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 217/355 (61%), Gaps = 53/355 (14%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEI 63
K++K K +G Q + F+ KGQHILKNP +V +IV+K+ +KSTD +LE+
Sbjct: 5 SKVKKTKAGASTGNVQS-------LPFNTDKGQHILKNPGVVNAIVEKSALKSTDTVLEV 57
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD 123
GPGTGNLT K+LE K VIA E+D RM+ E+++R TP ++L+V GDV+K + P+FD
Sbjct: 58 GPGTGNLTVKMLEVAKTVIACEIDPRMIAEVKKRVMGTPLQSKLQVNGGDVMKMEWPFFD 117
Query: 124 ICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
+CVAN+PYQISSP KLL H+P R A++MFQKEFA RLVA+PGDK Y RLSVN QL A
Sbjct: 118 VCVANLPYQISSPFVQKLLLHRPLPRYAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLA 177
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+V L+KV + FRPPPKVDS+VVRI P+ P P VN VEW+G LR+CF+RKNKTL +IFR
Sbjct: 178 KVEMLMKVKRTEFRPPPKVDSAVVRIAPKNPPPPVNFVEWEGLLRLCFMRKNKTLLAIFR 237
Query: 244 LKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVE 303
L NV+ ++E NYR + S N I D + + +E
Sbjct: 238 LSNVIEIIETNYRKV--------CSFKNKPIPKDL------------------NMKKVIE 271
Query: 304 DDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
D L + E RA K+ ++FL LL FNKA IHF
Sbjct: 272 D--------------------TLTASGYAENRARKMRVEDFLALLLAFNKADIHF 306
>gi|451853007|gb|EMD66301.1| hypothetical protein COCSADRAFT_296905 [Cochliobolus sativus
ND90Pr]
Length = 383
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 177/388 (45%), Positives = 234/388 (60%), Gaps = 34/388 (8%)
Query: 1 MAGGKIRKEKGKQK-----SGPYQGQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGI 54
M K ++ KG S P + A I K GQHILKNP + +IVQKA +
Sbjct: 1 MPKAKQKRSKGADNNSSPYSKPTSAKAAAAHSIFKMDKDLGQHILKNPGVATAIVQKAHL 60
Query: 55 KSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV 114
K +D +LE+GPGTGNLT +L+A K V AVE+D RM EL +R Q +P RL + GDV
Sbjct: 61 KQSDHVLEVGPGTGNLTVLILKAVKQVTAVEMDPRMAAELTKRVQGSPEEKRLTIRLGDV 120
Query: 115 LKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCR 174
+K +LP FD+C++N PYQISSPL FKLL Q RC ++MFQ+EFAMRL A+PG+KLY R
Sbjct: 121 IKAELPRFDVCISNTPYQISSPLVFKLLALQYPPRCCVLMFQREFAMRLFARPGEKLYSR 180
Query: 175 LSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRK 234
LSVN Q+ ++VSH++KVG+NNF PPP+V+S+VVRIEP+ PRPQ+ EWDG LRICF+RK
Sbjct: 181 LSVNVQMWSKVSHVMKVGRNNFNPPPQVESNVVRIEPKNPRPQIAYEEWDGLLRICFVRK 240
Query: 235 NKTLSSIFR-LKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVD 293
N+TL + F VL +L NYR L +QN + + D + + ++M VD
Sbjct: 241 NRTLRASFMGTAAVLELLASNYR----LYCAQN-DIPVDDTPLDPSEITAAEEAETMDVD 295
Query: 294 D-----GSDDEMDVEDDD---------------GDSDVEGEVSEF-KDKVLAVLR-EGQF 331
D DE D E D + +G ++E ++KV VL E Q
Sbjct: 296 DEFKGFSDPDEPDDELPDFFKQLQAESKKSKNGANRKRKGRLAELVREKVRKVLEDETQL 355
Query: 332 EEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+KRA + +FL LL FN+ GIHFS
Sbjct: 356 ADKRARLCDEADFLKLLYAFNQEGIHFS 383
>gi|25146882|ref|NP_496061.2| Protein E02H1.1 [Caenorhabditis elegans]
gi|27808654|sp|Q09522.2|DIM1_CAEEL RecName: Full=Probable dimethyladenosine transferase; AltName:
Full=Probable 18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=Probable 18S rRNA
dimethylase; AltName: Full=Probable
S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|20803714|emb|CAA87382.2| Protein E02H1.1 [Caenorhabditis elegans]
Length = 308
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 214/355 (60%), Gaps = 53/355 (14%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEI 63
K++K K +G Q + F+ KGQHILKNP +V +IV+K+ +K+TD +LE+
Sbjct: 5 SKVKKTKAGSSTGNVQS-------LPFNTDKGQHILKNPGVVNAIVEKSALKATDTVLEV 57
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD 123
GPGTGNLT K+LE K VIA E+D RM+ E+++R TP N+L+V GDV+K + P+FD
Sbjct: 58 GPGTGNLTVKMLEVAKTVIACEIDPRMIAEVKKRVMGTPLQNKLQVNGGDVMKMEWPFFD 117
Query: 124 ICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
+CVAN+PYQISSP KLL H+P R A++MFQKEFA RLVA+PGDK Y RLSVN QL A
Sbjct: 118 VCVANLPYQISSPFVQKLLLHRPLPRYAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLA 177
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+V L+KV + FRPPPKVDS+VVRI P+ P P VN VEW+G LR+CF+RKNKTL +IFR
Sbjct: 178 KVEMLMKVKRTEFRPPPKVDSAVVRIAPKNPPPPVNFVEWEGLLRLCFMRKNKTLMAIFR 237
Query: 244 LKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVE 303
L NV+ ++E N+R + S N I D
Sbjct: 238 LSNVIEVIEDNFRKV--------CSFKNKPIPKDL------------------------- 264
Query: 304 DDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
K + L + E RA K+ ++FL LL FNKA IHF
Sbjct: 265 -------------NMKKVIEETLTASGYGESRARKMRVEDFLALLLAFNKADIHF 306
>gi|268529208|ref|XP_002629730.1| Hypothetical protein CBG00961 [Caenorhabditis briggsae]
Length = 308
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 216/355 (60%), Gaps = 53/355 (14%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEI 63
K++K K +G Q + F+ KGQHILKNP +V +IV+K+ +KSTD +LE+
Sbjct: 5 SKVKKTKAGTSTGNVQS-------LPFNTDKGQHILKNPGVVNAIVEKSALKSTDTVLEV 57
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD 123
GPGTGNLT K+LE K VIA E+D RM+ E+++R TP +L+V GDV+K + P+FD
Sbjct: 58 GPGTGNLTVKMLEVAKTVIACEIDPRMIAEVKKRVMGTPLQTKLQVNGGDVMKQEWPFFD 117
Query: 124 ICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
+CVAN+PYQISSP KLL H+P R A++MFQKEFA RLVA+PGDK Y RLSVN QL A
Sbjct: 118 VCVANLPYQISSPFVQKLLLHRPLPRYAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLA 177
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+V L+KV + FRPPPKVDS+VVRI P+ P P VN VEW+G LR+CF+RKNKTL +IFR
Sbjct: 178 KVEMLMKVKRTEFRPPPKVDSAVVRIAPKNPPPPVNFVEWEGLLRLCFMRKNKTLLAIFR 237
Query: 244 LKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVE 303
L NV+ ++E NYR + +++ + P D N
Sbjct: 238 LSNVIEVIEDNYRKVCSMK--------------NKPLPKDFN------------------ 265
Query: 304 DDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
K + L + E RA K+ ++FL LL FNKA IHF
Sbjct: 266 --------------MKKLIEETLTASGYAENRARKMRVEDFLALLLAFNKADIHF 306
>gi|407852217|gb|EKG05843.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi]
Length = 344
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 225/359 (62%), Gaps = 54/359 (15%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGG----ISFHKSKGQHILKNPLLVESIVQKAGIKSTDV 59
GK K +KS + GL GG + F+K GQHILKNPL++ +IV+KA IK TDV
Sbjct: 35 GKPAARKASKKS---EMVGLKTGGSQSGMVFNKGFGQHILKNPLVIAAIVEKAAIKPTDV 91
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIGPGTGNLT+KLL+ K VIA E+DSRMV EL +RFQ+TP +++L+VI+G+ L +
Sbjct: 92 VLEIGPGTGNLTEKLLQVSKKVIAFEVDSRMVAELNKRFQNTPLASKLQVIRGNCLDHEF 151
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFD CVAN+PY ISS L FKLL +P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+
Sbjct: 152 PYFDKCVANVPYAISSALVFKLL-RKPTFKCAVLMFQREFALRVCAQPGAEAYCRLSVNS 210
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL AR SHL+K+ KN+F PPPKV+SSV+R++P+ P P V+ EWDG ++ F RKNK +S
Sbjct: 211 QLLARCSHLMKISKNSFNPPPKVESSVIRLDPKHPAPDVDFEEWDGLVKFIFNRKNKKVS 270
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
SIFR KN + L + Y + Q ++ G T + +
Sbjct: 271 SIFRTKNAVQTLYEKYCSYQKME-------GKTSVKS----------------------- 300
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
++EFK+ + V+++ FE RA L Q LL F + GIHF
Sbjct: 301 ---------------LAEFKEHLETVIQDPVFES-RARLLDQDSITKLLCHFTENGIHF 343
>gi|71656161|ref|XP_816632.1| ribosomal RNA adenine dimethylase family protein [Trypanosoma cruzi
strain CL Brener]
gi|70881773|gb|EAN94781.1| ribosomal RNA adenine dimethylase family protein, putative
[Trypanosoma cruzi]
Length = 344
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 224/359 (62%), Gaps = 54/359 (15%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGG----ISFHKSKGQHILKNPLLVESIVQKAGIKSTDV 59
GK K +KS GL GG + F+K GQHILKNPL++ +IV+KA IK TDV
Sbjct: 35 GKPAARKASKKSAMV---GLKTGGSQCGMVFNKGFGQHILKNPLVIAAIVEKAAIKPTDV 91
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIGPGTGNLT+KLL+ K VIA E+DSRMV EL +RFQ+TP +++L+VI+G+ L +
Sbjct: 92 VLEIGPGTGNLTEKLLQVSKKVIAFEVDSRMVAELNKRFQNTPLASKLQVIRGNCLDHEF 151
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFD CVAN+PY ISS L FKLL +P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+
Sbjct: 152 PYFDKCVANVPYAISSALVFKLL-RKPTFKCAVLMFQREFALRVCAQPGAEAYCRLSVNS 210
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL AR SHL+K+ KN+F PPPKV+SSV+R++P+ P P V+ EWDG ++ F RKNK +S
Sbjct: 211 QLLARCSHLMKISKNSFNPPPKVESSVIRLDPKHPAPDVDFEEWDGLVKFIFNRKNKKVS 270
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
SIFR KN + L + Y + Q ++ G T + +
Sbjct: 271 SIFRTKNAVQTLYEKYCSYQKME-------GKTSVKS----------------------- 300
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
++EFK+ + V+++ FE RA L Q LL F + GIHF
Sbjct: 301 ---------------LAEFKEHLETVMQDPVFES-RARLLDQDSITKLLCHFTENGIHF 343
>gi|327303040|ref|XP_003236212.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
rubrum CBS 118892]
gi|326461554|gb|EGD87007.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
rubrum CBS 118892]
Length = 377
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/384 (46%), Positives = 233/384 (60%), Gaps = 45/384 (11%)
Query: 7 RKEKGKQKSGPYQ---GQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
++ Q S PY + A I + GQH+LKNP + ++IV KA +K +D +LE
Sbjct: 8 KRNNAAQASSPYAQAVAKTKAAHNIFRMNTDIGQHVLKNPGVAQAIVDKADLKQSDTVLE 67
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPG+GNLT K+LE K VIAVELD RM EL +R Q P RL+V+ GDV+KT++PYF
Sbjct: 68 VGPGSGNLTVKILEKAKKVIAVELDPRMAAELTKRVQGKPEQKRLEVLLGDVMKTEVPYF 127
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+C++N PYQISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN Q+
Sbjct: 128 DVCISNTPYQISSPLTFKLLATNPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMW 187
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSI 241
A++ H++KVGKNNF+PPP V+SSVVRI P+ PRP ++ EWDG LRI F+RKNKTL SS
Sbjct: 188 AKIDHIMKVGKNNFKPPPAVESSVVRIVPKVPRPDISYDEWDGLLRIAFVRKNKTLRSSF 247
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGS----- 296
+V+SMLE NY T A QN N I +D +GDQ M ++
Sbjct: 248 LGTTSVVSMLEANYCTWCA----QN----NIPIDSDL-----LDGDQQMITEEDDDQGEE 294
Query: 297 -------------------DDEMDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKR 335
+ V G + G+V+ ++K+ VL + + +KR
Sbjct: 295 EDEIMEVDDEDDVPDFFKMEKVQTVSSKPGPTK-RGKVTNLVREKIRRVLEDDTKLADKR 353
Query: 336 ASKLTQQEFLYLLSLFNKAGIHFS 359
A + EFL LL FN+ GIHFS
Sbjct: 354 ARMCDEGEFLKLLWAFNQKGIHFS 377
>gi|385305949|gb|EIF49891.1| dimethyladenosine transferase [Dekkera bruxellensis AWRI1499]
Length = 324
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/331 (48%), Positives = 216/331 (65%), Gaps = 38/331 (11%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNP + ++IV KA I+ +DV+LEIGPGTGNLT ++LE + VIA+E+D R
Sbjct: 31 FNTNLGQHILKNPQIAQAIVDKAEIRPSDVVLEIGPGTGNLTMRILEKARKVIAIEVDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
M EL +R Q TP +L++ GD +K +LPYFD+C++N PYQISS + F+LL +
Sbjct: 91 MAGELLKRVQGTPVEKKLEITVGDFMKMKELPYFDVCISNTPYQISSGIVFRLLEMEHPP 150
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
R A++MFQ+EFAM L A+PGD LY RLS N Q+ A V H++KVGKNNFRPPPKV+SSVV+
Sbjct: 151 RIAVLMFQREFAMNLTARPGDNLYNRLSANAQMWANVKHVMKVGKNNFRPPPKVESSVVK 210
Query: 209 IEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSS 268
+ P+ PRP +N EWDG LR+CF RKNKTL +IFR K + ++LE+NY+ A + QN
Sbjct: 211 VIPKIPRPNLNYSEWDGLLRLCFNRKNKTLGAIFRNKKITAILEENYKRYLAYTTEQN-- 268
Query: 269 LGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLRE 328
GD S+ + ++DVE V + +KVL E
Sbjct: 269 -----------------GDMSI---------------ESNNDVESLVKQNVNKVLT---E 293
Query: 329 GQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F E+RASK+ Q FL LL F++ GIHF+
Sbjct: 294 TGFAEQRASKMDQVAFLKLLYAFHQVGIHFA 324
>gi|260943356|ref|XP_002615976.1| dimethyladenosine transferase [Clavispora lusitaniae ATCC 42720]
gi|238849625|gb|EEQ39089.1| dimethyladenosine transferase [Clavispora lusitaniae ATCC 42720]
Length = 322
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 141/249 (56%), Positives = 191/249 (76%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNPL+ + IV KA IK +D++LE+GPGTGNLT ++LE + V+AVE+D R
Sbjct: 30 FNTNLGQHILKNPLVAQGIVDKAQIKPSDIVLEVGPGTGNLTVRILEQARKVVAVEMDPR 89
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R TP +L+++ GD +KTDLPYFD+C++N PYQISSPL FKLL R
Sbjct: 90 MAAELTKRVHGTPQQKKLEILLGDFMKTDLPYFDVCISNTPYQISSPLVFKLLNQPKPPR 149
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFA+RL+A+PGD LYCRLS N Q+ A V+H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 150 VSILMFQREFALRLLARPGDGLYCRLSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRI 209
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E ++PRP ++ EWDG LRICF+RKNKT+++ F+ NVL +LEKNY+T A Q+ ++
Sbjct: 210 EVKQPRPNIDFNEWDGLLRICFVRKNKTIAAGFKSNNVLEILEKNYKTFLATQNDDAMNV 269
Query: 270 GNTEIGTDT 278
+ T+T
Sbjct: 270 DSQADMTET 278
>gi|326479389|gb|EGE03399.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
equinum CBS 127.97]
Length = 378
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/384 (45%), Positives = 232/384 (60%), Gaps = 44/384 (11%)
Query: 7 RKEKGKQKSGPYQ---GQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
++ Q S PY + A I + GQH+LKNP + ++IV KA +K +D +LE
Sbjct: 8 KRNNAAQASSPYAQAVAKTKAAHNIFRMNTDIGQHVLKNPGVAQAIVDKADLKQSDTVLE 67
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPG+GNLT K+LE K VIAVELD RM EL +R Q P RL+V+ GDV+KT++PYF
Sbjct: 68 VGPGSGNLTVKILEKAKKVIAVELDPRMAAELTKRVQGKPEQKRLEVLLGDVMKTEVPYF 127
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+C++N PYQISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN Q+
Sbjct: 128 DVCISNTPYQISSPLTFKLLATNPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMW 187
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSI 241
A++ H++KVGKNNF+PPP V+SSVVRI P+ PRP ++ EWDG LRI F+RKNKTL SS
Sbjct: 188 AKIDHIMKVGKNNFKPPPAVESSVVRIVPKVPRPDISYDEWDGLLRIAFVRKNKTLRSSF 247
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDG------ 295
+V+SMLE NY T A QN N I +D +GDQ M ++
Sbjct: 248 LGTTSVVSMLEANYCTWCA----QN----NIPIDSDL-----LDGDQQMITEEDDDQGEE 294
Query: 296 ------------------SDDEMDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKR 335
+++ G+V+ ++K+ VL + + +KR
Sbjct: 295 EVDEIMDVDDEDDVPDFPKTEKVQTASSKPGPTKRGKVTNLVREKIRQVLEDDTKLADKR 354
Query: 336 ASKLTQQEFLYLLSLFNKAGIHFS 359
A + EFL LL FN+ GIHFS
Sbjct: 355 ARICDEGEFLKLLWAFNQKGIHFS 378
>gi|324516507|gb|ADY46552.1| Dimethyladenosine transferase [Ascaris suum]
Length = 308
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/336 (47%), Positives = 215/336 (63%), Gaps = 46/336 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
+ + F+ KGQHILKNP +V +I++K+ IK+TD +LE+GPGTGNLT K+LE K VIA
Sbjct: 19 SSQALPFNTEKGQHILKNPGIVNAIIEKSAIKNTDTVLEVGPGTGNLTVKILEHAKKVIA 78
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
E+D+RM+ EL++R TP +L+V GDV+K + P+FD+CVAN+PYQISSP FKLL
Sbjct: 79 CEIDTRMIAELKKRVLGTPVQQKLEVRPGDVMKVEWPFFDVCVANLPYQISSPFVFKLLL 138
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
+P R A++MFQKEFA RL+A+P +K YCRLSVN QL A+V HL++V + FRPPPKVD
Sbjct: 139 QRPLPRYAVLMFQKEFADRLLAKPCEKSYCRLSVNVQLLAKVEHLMRVKRTEFRPPPKVD 198
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
S+VVRIEPR P P +N EWDG LRI F+RK+KTL SIF+ K V +LEKNYR + S
Sbjct: 199 SAVVRIEPRNPPPPINFQEWDGLLRIVFLRKSKTLLSIFKQKQVCDLLEKNYRI---VCS 255
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
++N L D+S + + +D
Sbjct: 256 AKNMPL-----------------DKSFKIRNKLED------------------------- 273
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L + F KRA ++ ++FL LL +FNK +HF+
Sbjct: 274 -ILTKSGFATKRARRMDIEDFLQLLLVFNKEDVHFA 308
>gi|326471294|gb|EGD95303.1| dimethyladenosine transferase dimethyltransferase [Trichophyton
tonsurans CBS 112818]
Length = 378
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/384 (45%), Positives = 232/384 (60%), Gaps = 44/384 (11%)
Query: 7 RKEKGKQKSGPYQ---GQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
++ Q S PY + A I + GQH+LKNP + ++IV KA +K +D +LE
Sbjct: 8 KRNNAAQASSPYAQAVAKTKAAHNIFRMNTDIGQHVLKNPGVAQAIVDKADLKQSDTVLE 67
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPG+GNLT K+LE K VIAVELD RM EL +R Q P RL+V+ GDV+KT++PYF
Sbjct: 68 VGPGSGNLTVKILEKAKKVIAVELDPRMAAELTKRVQGKPEQKRLEVLLGDVMKTEVPYF 127
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+C++N PYQISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN Q+
Sbjct: 128 DVCISNTPYQISSPLTFKLLATNPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMW 187
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSI 241
A++ H++KVGKNNF+PPP V+SSVVRI P+ PRP ++ EWDG LRI F+RKNKTL SS
Sbjct: 188 AKIDHIMKVGKNNFKPPPAVESSVVRIVPKVPRPDISYDEWDGLLRIAFVRKNKTLRSSF 247
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDG------ 295
+V+SMLE NY T A QN N I +D +GDQ M ++
Sbjct: 248 LGTTSVVSMLEANYCTWCA----QN----NIPIDSDL-----LDGDQQMITEEDDDQGEE 294
Query: 296 ------------------SDDEMDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKR 335
+++ G+V+ ++K+ VL + + +KR
Sbjct: 295 EVDEIMDVDDEDDVPDFFKTEKVQTASSKPGPTKRGKVTNLVREKIRQVLEDDTKLADKR 354
Query: 336 ASKLTQQEFLYLLSLFNKAGIHFS 359
A + EFL LL FN+ GIHFS
Sbjct: 355 ARICDEGEFLKLLWAFNQKGIHFS 378
>gi|330912552|ref|XP_003295983.1| hypothetical protein PTT_04321 [Pyrenophora teres f. teres 0-1]
gi|311332221|gb|EFQ95920.1| hypothetical protein PTT_04321 [Pyrenophora teres f. teres 0-1]
Length = 380
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/390 (45%), Positives = 234/390 (60%), Gaps = 41/390 (10%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFH------KSKGQHILKNPLLVESIVQKAGI 54
M K ++ KG K + A + H K GQHILKNP + +IVQKA +
Sbjct: 1 MPKAKQKRTKGADKDASPYARPTSAKASAAHSIFKMDKDLGQHILKNPGVATAIVQKAHL 60
Query: 55 KSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV 114
K +D +LE+GPGTGNLT +L+A K V AVE+D RM EL +R Q +P RL + GDV
Sbjct: 61 KQSDHVLEVGPGTGNLTVLILKAAKQVTAVEMDPRMAAELTKRVQGSPEEKRLTIRLGDV 120
Query: 115 LKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCR 174
+K +LP FD+C++N PYQISSPL FKLL Q RC I+MFQ+EFAMRL A+PG+KLY R
Sbjct: 121 IKAELPRFDVCISNTPYQISSPLVFKLLALQHPPRCCILMFQREFAMRLFARPGEKLYSR 180
Query: 175 LSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRK 234
LSVN Q+ ++VSH++KVG+NNF PPP+V+S+VVRIEP+ PRPQ+ EWDG LRICF+RK
Sbjct: 181 LSVNVQMWSKVSHVMKVGRNNFNPPPQVESNVVRIEPKNPRPQIAYEEWDGLLRICFVRK 240
Query: 235 NKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSN--GDQSMG 291
N+TL +S VL +L NYR L +QN +I D L S ++M
Sbjct: 241 NRTLRASFLGTAAVLELLASNYR----LFCAQN------DIPVDDTPLDPSEIVEPETME 290
Query: 292 VDDGSD----------------DEMDVEDDDGDSDV----EGEVSEF-KDKVLAVLR-EG 329
VDD ++ E G + V +G VSE ++KV VL +
Sbjct: 291 VDDEFKGFSDPDDPDDELPDFFKQLQAEKSKGKNGVNRKRKGRVSELVREKVRKVLEDDT 350
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
Q +KRA + +FL LL FN+ GIHFS
Sbjct: 351 QLADKRARLCDEGDFLKLLYAFNQKGIHFS 380
>gi|290996728|ref|XP_002680934.1| predicted protein [Naegleria gruberi]
gi|284094556|gb|EFC48190.1| predicted protein [Naegleria gruberi]
Length = 308
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/333 (48%), Positives = 217/333 (65%), Gaps = 45/333 (13%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F KS GQHIL NP +++ +++KA I+ TD +LEIGPGTGN+T KLL+ K VIA+E+
Sbjct: 21 GIQFQKSFGQHILINPGVIDHVIEKACIQPTDTVLEIGPGTGNMTVKLLQKAKKVIAIEV 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV+EL++R Q T ++L++I D LK +LPYFD+C+AN+PYQISSP+TFKLL HQP
Sbjct: 81 DPRMVVELKKRVQGTALESKLQIIHKDALKVELPYFDLCIANLPYQISSPITFKLLAHQP 140
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
+FR A +M+Q+EFA RLVA+PGD LYCRLSVNTQL AR H++KV KN+FRPPPKV+SS+
Sbjct: 141 SFRVAYLMYQREFAQRLVAKPGDNLYCRLSVNTQLLARCDHVVKVSKNSFRPPPKVESSI 200
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEP+ P P +N +EWDG RI F R+NK L S+F+ K +L +L +NY+
Sbjct: 201 VRIEPKNPPPPINFLEWDGLARILFQRRNKQLGSVFKNKKLLKLLGENYKQ--------- 251
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
T+T + N + E +V +D + L
Sbjct: 252 ---------TETKKKVNMN------------------------EYEQKV---RDIIAETL 275
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
E Q +KR K+ Q + L LL+ N+ G+HFS
Sbjct: 276 EELQMTDKRPCKMDQDDILSLLTRLNEQGVHFS 308
>gi|261328672|emb|CBH11650.1| ribosomal RNA adenine dimethylase family protein,conserved,
putative [Trypanosoma brucei gambiense DAL972]
Length = 383
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 224/359 (62%), Gaps = 54/359 (15%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGG----ISFHKSKGQHILKNPLLVESIVQKAGIKSTDV 59
GK K +KS P GL GG + F+K GQHILKNPL++ +IV+KA +K TD+
Sbjct: 74 GKPEIRKATKKSAP---TGLKTGGSQSGMVFNKGFGQHILKNPLVIAAIVEKAAVKPTDI 130
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIGPGTGNLT+KLL+A K VIA E+D RMV EL +RFQ++P + +L+VI+G+ L +
Sbjct: 131 VLEIGPGTGNLTEKLLQAAKKVIAFEVDPRMVAELNKRFQNSPLAPKLQVIRGNCLDHEF 190
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFD CVAN+PY ISS L FKLL +P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+
Sbjct: 191 PYFDKCVANVPYAISSALVFKLL-KRPNFKCAVLMFQREFALRVCAQPGSEAYCRLSVNS 249
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL AR SHL+K+ KN+F PPPKV+SSV+R++P+ P P V+ EWDG ++ F RKNK +S
Sbjct: 250 QLLARCSHLMKISKNSFNPPPKVESSVIRLDPKHPAPSVDFEEWDGLVKHIFNRKNKKVS 309
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
SIFR KN + L Y + Q ++ GV+D E
Sbjct: 310 SIFRTKNTVRTLYDKYCSYQRME----------------------------GVNDVKTFE 341
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
EF+ + ++L+E F +KRA L Q+ + LL F K IHF
Sbjct: 342 -----------------EFRQHLESILQEPIF-DKRARVLDQESIMELLCCFTKNDIHF 382
>gi|50551823|ref|XP_503386.1| YALI0E00770p [Yarrowia lipolytica]
gi|52782774|sp|Q6C7H6.1|DIM1_YARLI RecName: Full=Dimethyladenosine transferase; AltName: Full=18S rRNA
(adenine(1779)-N(6)/adenine(1780)-N(6))-
dimethyltransferase; AltName: Full=18S rRNA dimethylase;
AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|49649255|emb|CAG78965.1| YALI0E00770p [Yarrowia lipolytica CLIB122]
Length = 317
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/359 (45%), Positives = 224/359 (62%), Gaps = 42/359 (11%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MA +K G + G+ + GQHILKNPL+ + IV K+ IK +D +
Sbjct: 1 MAKAPAKKFSGGAQRESAGGEQRKTAVFKMNTDLGQHILKNPLVAQGIVDKSDIKPSDTV 60
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LE+GPGTGNLT ++LE + VIAVE+D RM EL +R Q P +L+++ GD +KT+LP
Sbjct: 61 LEVGPGTGNLTVRILEKARKVIAVEMDPRMAAELTKRVQGKPEQKKLEIMLGDCIKTELP 120
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
YFD+C++N PYQISSPL FKLL R +++MFQ EFAMRL+A+PGD LYCRLSVN Q
Sbjct: 121 YFDVCISNTPYQISSPLVFKLLNQPRPPRVSVLMFQHEFAMRLLARPGDSLYCRLSVNVQ 180
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
+ A+VSH++KVG+ NFRPPP V+SSVV+IE + PRP ++ EWDG LR+CF+RKNKT+++
Sbjct: 181 MWAKVSHVMKVGRGNFRPPPNVESSVVKIEVKNPRPPIDFNEWDGLLRVCFVRKNKTINA 240
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
F+ VL++LEKNY+T + Q EI + +GS+
Sbjct: 241 GFKTSAVLAVLEKNYQTWLSTQG---------EI-----------------IPEGSN--- 271
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
SDV K K+ +L + E R++K Q EFL LL+ F+KAGI+F+
Sbjct: 272 -------LSDV------VKQKINKILTDTGIGEMRSAKCDQTEFLTLLNEFHKAGIYFA 317
>gi|346326075|gb|EGX95671.1| dimethyladenosine transferase [Cordyceps militaris CM01]
Length = 391
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 182/390 (46%), Positives = 244/390 (62%), Gaps = 34/390 (8%)
Query: 4 GKIRKEK-GKQKSGPY----QGQGLGAGG--------ISFHKSKGQHILKNPLLVESIVQ 50
GK++ K G S PY Q +GG F+ + GQHILKNP + ++IV+
Sbjct: 2 GKVKTPKRGGASSSPYERPNQSSNNNSGGSKSAKNNVFKFNTNFGQHILKNPGVSDAIVE 61
Query: 51 KAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVI 110
KA +K TD +LE+GPGTGNLT ++LE K I VE+D RM E+ +R Q TP +L+V+
Sbjct: 62 KAYLKPTDTVLEVGPGTGNLTIRILERAKKCICVEVDPRMAAEVTKRVQGTPEQRKLEVL 121
Query: 111 QGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDK 170
GDV+KT+LP FD+C++N PYQISSPL FKLL R +I+MFQ+EFA+RL A+PGD
Sbjct: 122 LGDVIKTELPPFDVCISNTPYQISSPLVFKLLAMPNPPRTSILMFQREFALRLTARPGDT 181
Query: 171 LYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLR 228
LYCRLSVN Q AR++H++KVGKNNFRPPP+V+SSVVRIEP+ K RP V+ EWDG LR
Sbjct: 182 LYCRLSVNAQFWARITHVMKVGKNNFRPPPQVESSVVRIEPKVGKDRPNVSWDEWDGLLR 241
Query: 229 ICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQS-SQNSSL------GNTEIGTDTPS 280
+CF+RKNKTL +S K VL+M+E+NYRT A+ + + SL E D
Sbjct: 242 VCFVRKNKTLRASWLGTKEVLAMVERNYRTWCAMNGVAVDDSLVEDAAEEEEEEEEDVAM 301
Query: 281 LGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEG---------EVSEF-KDKVLAVLRE-G 329
G ++ D M VD+ DD + S +V+E ++K+ VL +
Sbjct: 302 DGGADDDGGMDVDEEDDDTPAFFKEVAASAAPAKTKSKRKKTKVAELVREKIRKVLEDVT 361
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ +KRA K + +FL LL FN+ GIHFS
Sbjct: 362 ELADKRAGKCDETDFLQLLFAFNEEGIHFS 391
>gi|72389977|ref|XP_845283.1| ribosomal RNA adenine dimethylase family protein, conserved
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359277|gb|AAX79719.1| ribosomal RNA adenine dimethylase family protein, conserved
[Trypanosoma brucei]
gi|70801818|gb|AAZ11724.1| ribosomal RNA adenine dimethylase family protein, conserved
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 344
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 223/359 (62%), Gaps = 54/359 (15%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGG----ISFHKSKGQHILKNPLLVESIVQKAGIKSTDV 59
GK K +KS P GL GG + F+K GQHILKNPL++ +IV+KA +K TD+
Sbjct: 35 GKPEVRKATKKSAP---TGLKTGGSQSGMVFNKGFGQHILKNPLVIAAIVEKAAVKPTDI 91
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIGPGTGNLT+KLL+A K VIA E+D RMV EL +RFQ++P + +L+VI+G+ L +
Sbjct: 92 VLEIGPGTGNLTEKLLQAAKKVIAFEVDPRMVAELNKRFQNSPLAPKLQVIRGNCLDHEF 151
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFD CVAN+PY ISS L FKLL +P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+
Sbjct: 152 PYFDKCVANVPYAISSALVFKLL-KRPNFKCAVLMFQREFALRVCAQPGSEAYCRLSVNS 210
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL AR SHL+K+ KN+F PPPKV+SSV+R++P+ P P V+ EWDG ++ F RKNK +S
Sbjct: 211 QLLARCSHLMKISKNSFNPPPKVESSVIRLDPKHPAPSVDFEEWDGLVKHIFNRKNKKVS 270
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
SIFR KN + L Y + Q ++ GV D E
Sbjct: 271 SIFRTKNTVRTLYDKYCSYQRME----------------------------GVKDVKTFE 302
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
EF+ + ++L+E F +KRA L Q+ + LL F K IHF
Sbjct: 303 -----------------EFRQHLESILQEPIF-DKRARVLDQESIMELLCCFTKNDIHF 343
>gi|4572637|emb|CAA92585.1| dimethylase [Schizosaccharomyces pombe]
Length = 315
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 163/329 (49%), Positives = 210/329 (63%), Gaps = 47/329 (14%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+K GQHILKNPL+ + IV KA +K +D +LE+GPGTGNLT ++LE + VIAVE+D R
Sbjct: 24 FNKDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPGTGNLTVRMLEKARKVIAVEMDPR 83
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M E+ +R Q TP +L+V+ GDV+KTDLPYFD+CV+N PYQISSPL FKLL +PA R
Sbjct: 84 MAAEITKRVQGTPKEKKLQVVLGDVIKTDLPYFDVCVSNTPYQISSPLVFKLLQQRPAPR 143
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
AI+MFQ+EFA+RLVA+PGD LYCRL N Q+ A V H++KVGKNNFRPPP V+SSVVRI
Sbjct: 144 GAILMFQREFALRLVARPGDPLYCRLPANVQMWAHVKHIMKVGKNNFRPPPLVESSVVRI 203
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EP+ P P + EWDG LRI F+RKNKT+ + F+ +++ M+E NYRT SQN
Sbjct: 204 EPKNPPPPLAFEEWDGLLRIVFLRKNKTIGACFKTSSIIEMVENNYRTW----CSQN--- 256
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
+ M ED D S ++G VL++
Sbjct: 257 ----------------------------ERMVEEDFDVKSLIDG-----------VLQQC 277
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
++ RASK QQ L LL F++ G F
Sbjct: 278 NLQDARASKCGQQS-LSLLHPFHQVGRSF 305
>gi|320583126|gb|EFW97342.1| dimethyladenosine transferase [Ogataea parapolymorpha DL-1]
Length = 319
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 161/331 (48%), Positives = 210/331 (63%), Gaps = 38/331 (11%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA I+ +DV+LEIGPGTGNLT ++LE + VIA E+D +
Sbjct: 26 FNTDLGQHILKNPLIAQGIVDKAEIRPSDVVLEIGPGTGNLTVRILEKARKVIASEVDPK 85
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTD-LPYFDICVANIPYQISSPLTFKLLFHQPAF 148
M EL +R Q TPY +L++I GD +K + LPYFD+C++N PYQISS + FKLL
Sbjct: 86 MAAELTKRVQGTPYEKKLEIIMGDFMKLETLPYFDVCISNTPYQISSGIVFKLLSMPRPP 145
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
R A++MFQ+EFAM L A+PGD LY RLS N Q+ A V H++KVGKNNFRPPPKV+SSVV+
Sbjct: 146 RIAVLMFQREFAMNLTARPGDALYNRLSANAQMWANVKHVMKVGKNNFRPPPKVESSVVK 205
Query: 209 IEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSS 268
+EP+ PRP ++ EWDG LR CF RKNKTL++ FR +L +LE NY+T ++ S Q
Sbjct: 206 VEPKIPRPNLDYNEWDGLLRFCFNRKNKTLNATFRNNKILEILENNYKTFLSILSEQRG- 264
Query: 269 LGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLRE 328
EM V D +D V E KVLA E
Sbjct: 265 ------------------------------EMMV---DAKTDFSAVVKENVTKVLA---E 288
Query: 329 GQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F E+R +K+ Q +FL LL F++ GIHF+
Sbjct: 289 TGFGERRPAKMDQTDFLKLLYAFHQVGIHFA 319
>gi|339240561|ref|XP_003376206.1| dimethyladenosine transferase [Trichinella spiralis]
gi|316975090|gb|EFV58549.1| dimethyladenosine transferase [Trichinella spiralis]
Length = 296
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 162/358 (45%), Positives = 217/358 (60%), Gaps = 63/358 (17%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
M KI++ GK + I F + GQHILKNPL+V SI++KA IK D I
Sbjct: 1 MPKPKIKRHIGKS--------NISRQEIPFKTTYGQHILKNPLIVNSIIEKAAIKQGDTI 52
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
E+GPGTGNLT V+A E+D R+ EL +R Q + ++L+++ GD LK P
Sbjct: 53 FEVGPGTGNLT---------VVACEIDYRLAAELTKRVQGSALQSKLEILPGDALKVQWP 103
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
+FD+CVAN+P+QISSP F+LL H+P FRCA++MFQKEFA RLVA+PGD+LYCRLSVN Q
Sbjct: 104 FFDVCVANLPFQISSPFVFRLLLHRPPFRCAVLMFQKEFAERLVAKPGDRLYCRLSVNVQ 163
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
L A+V+ +++VG+NNFRPPPKVD++VVR E + P P ++ EWDG LRI F+RKNK+LSS
Sbjct: 164 LLAKVNAVIRVGRNNFRPPPKVDATVVRFELKMPPPPIDFQEWDGLLRIAFLRKNKSLSS 223
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
F+ K VL ML+KNYR + S+ N +I +D+
Sbjct: 224 AFKFKKVLDMLDKNYRV--------HCSVNNIKI----------------------EDDF 253
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+V K +V +L E F++ RA +T +FL LL FN AG HF
Sbjct: 254 NV----------------KSEVYRILNEKNFQDCRARTMTIDDFLILLEAFNSAGFHF 295
>gi|146093446|ref|XP_001466834.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania infantum JPCM5]
gi|134071198|emb|CAM69883.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania infantum JPCM5]
Length = 374
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 158/337 (46%), Positives = 222/337 (65%), Gaps = 26/337 (7%)
Query: 22 GLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMV 81
G GI F+K GQHILKNPL++ +IV+KA IK TD+++EIGPGTGNLT+KLL+ K V
Sbjct: 63 GGSQSGIVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTEKLLQTAKKV 122
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKL 141
IA E+D RMV EL +RFQ+TP +++L++I+G+ L+ D PYFD CVAN+PY ISS L FKL
Sbjct: 123 IAFEIDPRMVAELNKRFQNTPLASKLQIIRGNCLEQDFPYFDKCVANVPYAISSALVFKL 182
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+QL AR SHL+K+ KN+F PPPK
Sbjct: 183 L-KTPTFKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPK 241
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL 261
V+SSV+R++P+ PRP V+ EWDG +++ F RKNK SSIFR K + L Y + + +
Sbjct: 242 VESSVIRLDPKHPRPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAVQALYDKYVSYRKM 301
Query: 262 QSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDK 321
+ G +GT T +G + + D + +F+
Sbjct: 302 E-------GGQPVGTAT------SGAKPL-----------TSSSSADVGSSVSLEQFRVL 337
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ +V+ + F EKR+ L ++ + +L+ F K GIHF
Sbjct: 338 LDSVIADPMF-EKRSRMLDEEALMTMLAHFIKHGIHF 373
>gi|122937785|gb|ABM68619.1| AAEL010575-PA [Aedes aegypti]
Length = 266
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 201/312 (64%), Gaps = 46/312 (14%)
Query: 48 IVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRL 107
++ KAG++ TDV+LEIGPGTGN+T KLLE K V+A E+D R+V ELQ+R Q TP ++L
Sbjct: 1 MLDKAGLRPTDVVLEIGPGTGNMTVKLLEKVKKVVACEIDPRLVAELQKRVQGTPMQSKL 60
Query: 108 KVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQP 167
+++ GDVLK DLP+FD CVAN+PYQISSP FKLL H+P FRCA++MFQ EFA RLVA+P
Sbjct: 61 QILIGDVLKADLPFFDCCVANMPYQISSPFVFKLLLHRPFFRCAVLMFQLEFAQRLVAKP 120
Query: 168 GDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL 227
GDKLYCRLSVNTQL ARV L+KVGKNNFRPPPKV+SSVVRIEPR P P +N EWDG
Sbjct: 121 GDKLYCRLSVNTQLLARVDMLMKVGKNNFRPPPKVESSVVRIEPRNPSPPINYTEWDGLT 180
Query: 228 RICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGD 287
RI F+RKNKTL++ F+ +V++ LE+N++ SL N ++
Sbjct: 181 RIAFLRKNKTLAAAFKQTSVMTALEQNFK--------MQCSLKNQDL------------- 219
Query: 288 QSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYL 347
E K+KV +L + KRA + +F+ +
Sbjct: 220 -------------------------PEGFSIKEKVEGILAKIDAGAKRARTMDIDDFMAV 254
Query: 348 LSLFNKAGIHFS 359
L FN GIHFS
Sbjct: 255 LHAFNSEGIHFS 266
>gi|157872123|ref|XP_001684610.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania major strain Friedlin]
gi|68127680|emb|CAJ05804.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania major strain Friedlin]
Length = 374
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 218/332 (65%), Gaps = 26/332 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+K GQHILKNPL++ +IV+KA IK TD+++EIGPGTGNLT+KLL+ K VIA E+
Sbjct: 68 GIVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTEKLLQTAKKVIAFEI 127
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV EL +RFQ+TP +++L++I+G+ L+ D P FD CVAN+PY ISS L FKLL P
Sbjct: 128 DPRMVAELNKRFQNTPLASKLQIIRGNCLEQDFPRFDKCVANVPYAISSALVFKLL-KTP 186
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+QL AR SHL+K+ KN+F PPPKV+SSV
Sbjct: 187 TFKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSV 246
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
+R++P+ P P V+ EWDG +++ F RKNK SSIFR K L Y + + ++
Sbjct: 247 IRLDPKYPPPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAAQALYDKYVSYRKME---- 302
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
G +GT T G+ + D S + E +F+ + AV+
Sbjct: 303 ---GGQPVGTAT---------------SGAKPLTSSRNADASSSMSLE--QFRVLLAAVI 342
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ FE+ R+ L + + +L+ F K GIHF
Sbjct: 343 ADPMFEQ-RSRMLDEVALMTMLAHFIKHGIHF 373
>gi|189192010|ref|XP_001932344.1| dimethyladenosine transferase dimethyltransferase [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187973950|gb|EDU41449.1| dimethyladenosine transferase dimethyltransferase [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 380
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 178/390 (45%), Positives = 234/390 (60%), Gaps = 41/390 (10%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFH------KSKGQHILKNPLLVESIVQKAGI 54
M K ++ KG K + A + H K GQHILKNP + +IVQKA +
Sbjct: 1 MPKAKQKRTKGADKDASPYARPTSAKASAAHSIFKMDKDLGQHILKNPGVATAIVQKAHL 60
Query: 55 KSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV 114
K +D +LE+GPGTGNLT +L+A K V AVE+D RM EL +R Q +P RL + GDV
Sbjct: 61 KQSDHVLEVGPGTGNLTVLILKAAKQVTAVEMDPRMAAELTKRVQGSPEEKRLTIRLGDV 120
Query: 115 LKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCR 174
+K +LP FD+C++N PYQISSPL FKLL Q RC I+MFQ+EFAMRL A+PG+KLY R
Sbjct: 121 IKAELPRFDVCISNTPYQISSPLVFKLLALQHPPRCCILMFQREFAMRLFARPGEKLYSR 180
Query: 175 LSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRK 234
LSVN Q+ ++VSH++KVG+NNF PPP+V+S+VVRIEP+ PRPQ+ EWDG LRICF+RK
Sbjct: 181 LSVNVQMWSKVSHVMKVGRNNFNPPPQVESNVVRIEPKNPRPQIAYEEWDGLLRICFVRK 240
Query: 235 NKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSN--GDQSMG 291
N+TL +S VL +L NYR L +QN +I D L S ++M
Sbjct: 241 NRTLRASFLGTAAVLELLASNYR----LFCAQN------DIPVDDTPLDPSEMVEPETME 290
Query: 292 VDDGSD----------------DEMDVEDDDGDSDV----EGEVSEF-KDKVLAVLR-EG 329
VDD + ++ E + V +G VSE ++KV VL +
Sbjct: 291 VDDEFNGFSDPDDPDDELPDFFKQLQAEKSKSKNGVNRKRKGRVSELVREKVRKVLEDDT 350
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
Q +KRA + +FL LL FN+ GIHFS
Sbjct: 351 QLADKRARLCDEGDFLKLLYAFNQEGIHFS 380
>gi|398019144|ref|XP_003862736.1| ribosomal RNA adenine dimethylase family protein, putative
[Leishmania donovani]
gi|322500967|emb|CBZ36044.1| ribosomal RNA adenine dimethylase family protein, putative
[Leishmania donovani]
Length = 374
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 158/337 (46%), Positives = 222/337 (65%), Gaps = 26/337 (7%)
Query: 22 GLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMV 81
G GI F+K GQHILKNPL++ +IV+KA IK TD+++EIGPGTGNLT+KLL+ K V
Sbjct: 63 GGSQSGIVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTEKLLQTAKKV 122
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKL 141
IA E+D RMV EL +RFQ+TP +++L++I+G+ L+ D PYFD CVAN+PY ISS L FKL
Sbjct: 123 IAFEIDPRMVAELNKRFQNTPLASKLQIIRGNCLEQDFPYFDKCVANVPYAISSALVFKL 182
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+QL AR SHL+K+ KN+F PPPK
Sbjct: 183 L-KTPTFKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPK 241
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL 261
V+SSV+R++P+ PRP V+ EWDG +++ F RKNK SSIFR K + L Y + + +
Sbjct: 242 VESSVIRLDPKHPRPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAVQALYDKYVSYRKM 301
Query: 262 QSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDK 321
+ G +GT T +G + + D + +F+
Sbjct: 302 E-------GGQPVGTAT------SGAKPL-----------TSSSSADVGSSVSLEQFRVL 337
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ +V+ + F EKR+ L ++ + +L+ F K GIHF
Sbjct: 338 LDSVIADPMF-EKRSRMLDEEALMTMLAHFIKHGIHF 373
>gi|154341407|ref|XP_001566655.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063980|emb|CAM40171.1| putative ribosomal RNA adenine dimethylase family protein
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 366
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 227/349 (65%), Gaps = 37/349 (10%)
Query: 12 KQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLT 71
++K+GP G GI F+K GQHILKNPL++ +IV+K+ IK TDV++EIGPGTGNLT
Sbjct: 52 QEKAGPGVRAGGSQSGIVFNKGFGQHILKNPLVIAAIVEKSAIKPTDVVVEIGPGTGNLT 111
Query: 72 KKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPY 131
+KLL+ K VIA E+D RMV EL +RFQ+TP +++L++I+G+ L+ D PYFD CVAN+PY
Sbjct: 112 EKLLQTAKKVIAFEIDPRMVAELNKRFQNTPLASKLQIIRGNCLEQDFPYFDKCVANVPY 171
Query: 132 QISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
ISS L FKLL P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+QL AR SHL+K+
Sbjct: 172 AISSALVFKLL-KTPTFKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKI 230
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
+N+F PPPKV+SSV+R++P+ P P V+ EWDG +++ F RKNK SSIFR K + L
Sbjct: 231 SRNSFNPPPKVESSVIRLDPKCPPPDVDFEEWDGLVKMLFNRKNKKASSIFRTKVAVQAL 290
Query: 252 EKNYRTLQALQSSQ--NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDS 309
Y + + ++S Q S+ ++ + TP M +E
Sbjct: 291 YDKYVSYRRMESGQPVGSAASSSIVDASTP--------------------MSLE------ 324
Query: 310 DVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+F+ + +V+ + FE R+ L ++ + +L+ F K GIHF
Sbjct: 325 -------QFRVLLDSVIADPMFET-RSRMLDEEALMTMLAHFIKHGIHF 365
>gi|213406479|ref|XP_002174011.1| dimethyladenosine transferase [Schizosaccharomyces japonicus
yFS275]
gi|212002058|gb|EEB07718.1| dimethyladenosine transferase [Schizosaccharomyces japonicus
yFS275]
Length = 307
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/330 (50%), Positives = 213/330 (64%), Gaps = 46/330 (13%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+K GQHILKNPL+ + IV K+ +K +D +LE+GPGTGNLT ++LE K V AVE+D R
Sbjct: 24 FNKDFGQHILKNPLVAQGIVDKSDLKQSDTVLEVGPGTGNLTVRILEKVKKVTAVEMDPR 83
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R Q TP +L ++ GDV+KT+LPYFD+C++N PYQISSPL FKLL H+PA R
Sbjct: 84 MAAELTKRVQGTPQEKKLNILLGDVIKTELPYFDVCISNTPYQISSPLVFKLLKHRPAPR 143
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
A++MFQ+EFA+RLVA+PGD LYCRLS N Q+ A V H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 144 LAVLMFQREFALRLVAKPGDPLYCRLSANVQMWAHVKHIMKVGKNNFRPPPQVESSVVRI 203
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EP+ P P ++ EWDG LRI F+RKNKT+++ F+ +VL M+E NYRT SQ+ +
Sbjct: 204 EPKIPPPPIDFDEWDGLLRIVFLRKNKTINACFKTGSVLEMMESNYRTW----CSQHEQM 259
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
E G D L D DQ+
Sbjct: 260 --IEDGFDIRGLVDKALDQTT--------------------------------------- 278
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
E RASK Q+EFL LL F++ GIHF+
Sbjct: 279 -LREVRASKCGQEEFLTLLHAFHQVGIHFA 307
>gi|350635263|gb|EHA23625.1| hypothetical protein ASPNIDRAFT_47196 [Aspergillus niger ATCC 1015]
Length = 276
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/326 (51%), Positives = 204/326 (62%), Gaps = 56/326 (17%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP + + IV KA +K +DV+LEIGPGTGNLT K+LE K VIAVELD RM E+
Sbjct: 6 GQHILKNPGVAQRIVDKAELKQSDVVLEIGPGTGNLTVKILEQAKKVIAVELDPRMAAEV 65
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP RL VI GDV+KTDLPYFD+C++N PYQISSPLTFKLL PA R ++M
Sbjct: 66 TKRVQGTPAQKRLDVILGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATSPAPRICVLM 125
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RL A+PGDKLY RLSVN Q+ A++ H++KVGKNNF+PPP V+SSVVR+ P+ P
Sbjct: 126 FQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVESSVVRLVPKNP 185
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQSSQNSSLGNTE 273
RPQ+N EWDG LRI F+RKNKT+ S F K+ V+ MLE NYRT A QN
Sbjct: 186 RPQINYDEWDGLLRILFVRKNKTIRSSFLGKSTVMDMLEANYRTWCA----QN------- 234
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEE 333
D P V +DE + D
Sbjct: 235 ---DIP------------VRQVLEDETRLAD----------------------------- 250
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHFS 359
KRA + +FL LL FN+ G HFS
Sbjct: 251 KRARMCDENDFLKLLWAFNQKGFHFS 276
>gi|219115097|ref|XP_002178344.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410079|gb|EEC50009.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 322
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/350 (47%), Positives = 222/350 (63%), Gaps = 46/350 (13%)
Query: 10 KGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGN 69
K QK+ P IS + S GQH LKNP ++ SI+ KAG+K+TDV+LEIGPGTGN
Sbjct: 19 KPYQKASPASTNSASTNLISPNTSLGQHFLKNPAVISSIIDKAGLKATDVVLEIGPGTGN 78
Query: 70 LTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANI 129
+T +L+ K V+A+E DSRMV E+ +R + T +++L+VIQGD +KT P+FD +AN+
Sbjct: 79 MTVPMLQRAKKVVALEFDSRMVREVLKRTEGTDLAHKLQVIQGDAMKTAWPFFDCMIANL 138
Query: 130 PYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLL 189
PYQISS + FKLL H+P FRCA++MFQ+EFA+RL A+PG+ LYCRLSVNTQL A+V LL
Sbjct: 139 PYQISSQVVFKLLSHRPMFRCAVLMFQEEFALRLSARPGEALYCRLSVNTQLLAKVDQLL 198
Query: 190 KVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
KVGK NFRPPPKV+S VVRIE + P P VN EWDG +R+ F RKNKTL S+ K+V+
Sbjct: 199 KVGKQNFRPPPKVESRVVRIELKNPPPPVNFTEWDGMIRLLFNRKNKTLRSVLNTKSVMK 258
Query: 250 MLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDS 309
+LE N RT+Q+L + + DG ++ VE+
Sbjct: 259 LLEDNRRTVQSLHPEK--------------------------MVDGRPAQVIVEE----- 287
Query: 310 DVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L ++ +RA+KL +FL LL+ FN+AGIHF+
Sbjct: 288 ---------------ILERDSWKGQRAAKLDLDDFLQLLAEFNEAGIHFN 322
>gi|384498902|gb|EIE89393.1| dimethyladenosine transferase [Rhizopus delemar RA 99-880]
Length = 308
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/337 (49%), Positives = 214/337 (63%), Gaps = 46/337 (13%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
+ A G F+K GQHILKNPL+ + IV KA + ++D +LEIGPGTGNLT ++L+A K V
Sbjct: 18 MRAFGPIFNKDLGQHILKNPLVAQGIVDKANLVNSDTVLEIGPGTGNLTVRILQACKKVY 77
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
AVE+D R+ ELQ+R TP +L ++ GD +KTDLP+FD+C++N PYQISS L FKLL
Sbjct: 78 AVEMDPRLAAELQKRVNGTPDQKKLNILLGDFMKTDLPFFDVCISNTPYQISSVLVFKLL 137
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H+P FR AI+MFQ+EFA+RLVA+PGD+LYCRLSVN QL A+V H++KVGKNNFRPPPKV
Sbjct: 138 EHRPLFRVAILMFQREFALRLVAKPGDELYCRLSVNVQLLAKVDHVMKVGKNNFRPPPKV 197
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQ 262
+SSVVR+EP+ P P VN E+DG LRI F RK+K S+ F+ VL+MLE+NY+T
Sbjct: 198 ESSVVRLEPKNPPPPVNFKEFDGLLRILFTRKHKIFSANFKQTTVLNMLEENYKTY---- 253
Query: 263 SSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKV 322
S + VE D + K KV
Sbjct: 254 --------------------------------CSAHGLMVEAD----------FDIKTKV 271
Query: 323 LAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ +L +KRA+K +FL LL FN A IHFS
Sbjct: 272 MQILESTGMADKRAAKCDLDDFLNLLLAFNNANIHFS 308
>gi|313228791|emb|CBY17942.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 225/363 (61%), Gaps = 53/363 (14%)
Query: 4 GKIRKEKGK---QKSGPYQGQGLGAG-GISFHKS-KGQHILKNPLLVESIVQKAGIKSTD 58
GK+R++ K + S + GA G+ F+ S GQHILKNP +V+S+V+KAG+ +D
Sbjct: 2 GKVRRQAAKSSGKTSKDSKTVTPGASQGLVFNTSGYGQHILKNPQVVQSMVEKAGVLPSD 61
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
ILEIGPGTGN+T KLLE K VIA+E+D RMV E+Q+R TP ++L +I D LK +
Sbjct: 62 TILEIGPGTGNMTVKLLEKCKKVIALEVDERMVAEVQKRVMGTPLKHKLTIINKDALKAE 121
Query: 119 LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVN 178
LP+FD+ VAN+PY ISSP+TFKLL H+P FR A++MFQKEFA RLVAQPGDK+Y RLSV
Sbjct: 122 LPFFDLVVANLPYAISSPITFKLLLHRPMFRVAVLMFQKEFADRLVAQPGDKIYSRLSVA 181
Query: 179 TQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPV--EWDGFLRICFIRKNK 236
Q ARV +LKVGKNNF+PPPKV+S+VVRIEPR+P +N EWD LRICF RKN+
Sbjct: 182 VQSLARVDRILKVGKNNFKPPPKVESTVVRIEPRRPPLPINFTQGEWDSMLRICFGRKNR 241
Query: 237 TLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGS 296
+ F K VL LEKN++T +L QN SL
Sbjct: 242 IMKGEFTNKKVLETLEKNFQTHCSL---QNKSL--------------------------- 271
Query: 297 DDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGI 356
MD +FK+ V+ + EKRA ++ +F+ LL+ FN+ GI
Sbjct: 272 --PMDF--------------DFKELVIEAVESSDMAEKRARQMDLDDFMKLLAAFNERGI 315
Query: 357 HFS 359
HF+
Sbjct: 316 HFA 318
>gi|254583294|ref|XP_002497215.1| ZYRO0F00308p [Zygosaccharomyces rouxii]
gi|238940108|emb|CAR28282.1| ZYRO0F00308p [Zygosaccharomyces rouxii]
Length = 319
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/330 (47%), Positives = 209/330 (63%), Gaps = 41/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA ++ +D +LE+GPGTGNLT ++LE + AVE+D R
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQLRPSDTVLEVGPGTGNLTVRILEQVRKAYAVEMDPR 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R + T +L+++ GD +KTDLPYFD+C++N PYQISSPL FKL+ R
Sbjct: 91 MAAELTKRVRGTDGERKLEILLGDFIKTDLPYFDVCISNTPYQISSPLVFKLINQPRPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
A++MFQ+EFAMRLVA+PGD LYCRLS N Q+ A V H++KV KNNFRPPP+V+SSVVR+
Sbjct: 151 VAVLMFQREFAMRLVARPGDALYCRLSANVQMWANVVHIMKVSKNNFRPPPQVESSVVRL 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRP + EWDG LRI F+RKNKT+++ F+ +V+ +LEKNY+T A+
Sbjct: 211 EIKNPRPPIEFNEWDGLLRIVFVRKNKTIAAGFKSSSVIDILEKNYKTFLAM-------- 262
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
+DEM V+D G K K+ VL+E
Sbjct: 263 ---------------------------NDEM-VDDTKGSM-----TQTVKSKIETVLQET 289
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
EKRA K Q +FL LL F++ GIHFS
Sbjct: 290 GLGEKRAGKCDQTDFLKLLYAFHQVGIHFS 319
>gi|328785046|ref|XP_624425.2| PREDICTED: probable dimethyladenosine transferase-like [Apis
mellifera]
Length = 280
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/332 (48%), Positives = 205/332 (61%), Gaps = 72/332 (21%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+ GQHILKNPL+++S+V+KA ++ TDV+LEIGP
Sbjct: 20 GILFNTDIGQHILKNPLVIQSMVEKAAVRPTDVVLEIGPA-------------------- 59
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
ELQ+R Q T Y ++L+++ GDVLKTDLP+FD+CVANIPYQISSPL FKLL H+P
Sbjct: 60 ------ELQKRVQGTAYQSKLQIMIGDVLKTDLPFFDLCVANIPYQISSPLVFKLLLHRP 113
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCAI+MFQ+EFA RLVA+PGDKLYCRLS+NTQL ARV L+KVGKNNFRPPPKV+S+V
Sbjct: 114 MFRCAILMFQREFAERLVAKPGDKLYCRLSINTQLLARVDLLMKVGKNNFRPPPKVESNV 173
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEPR P P +N EWDG RI F+RKNKTLS+ F+ VL+MLEKNY+ L S N
Sbjct: 174 VRIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQTTVLTMLEKNYK----LHCSLN 229
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
+ + + +G + KD + +L
Sbjct: 230 NKI----------------------ITEGFN--------------------IKDMISDIL 247
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
++ E KRA + +F+ LL FN G+HF
Sbjct: 248 QKADAENKRARTMDIDDFISLLHAFNAKGVHF 279
>gi|326433493|gb|EGD79063.1| dimethyladenosine transferase [Salpingoeca sp. ATCC 50818]
Length = 310
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 158/351 (45%), Positives = 214/351 (60%), Gaps = 52/351 (14%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K +G + G G+ F+K GQHILKNPL+V I+ KA I+S+D +LEIGPGT
Sbjct: 8 KARGHTAAASGPASGYRRTGVLFNKDFGQHILKNPLVVTGIIDKANIRSSDTVLEIGPGT 67
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GNLT KLLE +IA E+DSR+ EL +R T Y ++L ++ GD +K LP FD+CVA
Sbjct: 68 GNLTIKLLEKAGKLIAYEVDSRLADELVKRVSKTMYKSKLHLVLGDAIKNPLPAFDVCVA 127
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PYQISSP FK+L H+P FRCA++MFQ+EFA+RLVA+PG++ YCRLSVN QL + + H
Sbjct: 128 NMPYQISSPFVFKILKHRPLFRCAVLMFQREFALRLVAKPGEEHYCRLSVNAQLLSNIEH 187
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
++KV KNNFRPPPKV+SSVVRI P +P P V+ E+DG LRI F RKN+TL++ F+ K V
Sbjct: 188 VMKVSKNNFRPPPKVESSVVRIVPHRPAPDVDLSEFDGLLRIAFERKNRTLAAAFKKKGV 247
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
+++L +N++ ++G + P
Sbjct: 248 VALLLQNFK----------------QLGGEPP---------------------------- 263
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+FK ++ VL E + KR +L +FL LL FN AGIHF
Sbjct: 264 --------EDFKQFIVDVLTESDYASKRPQQLAVADFLRLLKAFNDAGIHF 306
>gi|390596405|gb|EIN05807.1| rRNA adenine dimethylase [Punctularia strigosozonata HHB-11173 SS5]
Length = 323
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/360 (46%), Positives = 214/360 (59%), Gaps = 52/360 (14%)
Query: 6 IRKEKGKQKSGPYQGQGLGAGGISFH------KSKGQHILKNPLLVESIVQKAGIKSTDV 59
IR + K + GAG + H + GQHILKNPL+ + IV KA ++ TD
Sbjct: 10 IRAHQPSAKKAAAKESSDGAGSSAVHNPIFNTERFGQHILKNPLVAQGIVDKANLRPTDQ 69
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LE+GPGTGNLT ++LE K V AVE+D RM EL +R Q P +L ++ GD +K DL
Sbjct: 70 VLEVGPGTGNLTVRILEKAKHVTAVEMDPRMAAELTKRVQGKPEQRKLSIMIGDFVKADL 129
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
PYFD+C++N PYQISSPL F+LL H+P FR AI+MFQ+EFA+RLVAQPG L+ RLS N
Sbjct: 130 PYFDVCISNTPYQISSPLVFRLLSHRPLFRVAILMFQREFALRLVAQPGTDLWSRLSANV 189
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
QL+A+V H++KVGKNNFRP P V+SSVVRI P P P V E+DG RI F R++KT+
Sbjct: 190 QLYAKVDHIMKVGKNNFRPAPNVESSVVRIVPLDPPPPVRFEEFDGLTRIIFGRRHKTVH 249
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
+ F+ K V+ MLEKNYRT S+ +
Sbjct: 250 ANFQAKGVMEMLEKNYRTW------------------------------------CSERD 273
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VEDD + K+ V VL E Q E RA+K+T + L LLS F+ AGIHF+
Sbjct: 274 QIVEDD----------FDIKNVVQKVLDETQNSENRAAKMTVNDLLILLSAFHDAGIHFA 323
>gi|380021910|ref|XP_003694799.1| PREDICTED: probable dimethyladenosine transferase-like [Apis
florea]
Length = 280
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 160/333 (48%), Positives = 206/333 (61%), Gaps = 72/333 (21%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+ GQHILKNPL+++S+V+KA ++ TDV+LEIGP
Sbjct: 20 GILFNTDIGQHILKNPLVIQSMVEKAAVRPTDVVLEIGPA-------------------- 59
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
ELQ+R Q T Y ++L+++ GD+LKTDLP+FD+CVANIPYQISSPL FKLL H+P
Sbjct: 60 ------ELQKRVQGTVYQSKLQIMIGDILKTDLPFFDLCVANIPYQISSPLVFKLLLHRP 113
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCAI+MFQ+EFA RLVA+PGDKLYCRLS+NTQL ARV L+KVGKNNFRPPPKV+S+V
Sbjct: 114 MFRCAILMFQREFAERLVAKPGDKLYCRLSINTQLLARVDLLMKVGKNNFRPPPKVESNV 173
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRIEPR P P +N EWDG RI F+RKNKTLS+ F+ VL+MLEKNY+ L S N
Sbjct: 174 VRIEPRNPPPPINYQEWDGLTRIAFVRKNKTLSAAFKQTTVLTMLEKNYK----LHCSLN 229
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
+ + + +G + KD + +L
Sbjct: 230 NKI----------------------ITEGFN--------------------IKDMINDIL 247
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
++ E KRA + +F+ LL FN G+HF+
Sbjct: 248 QKADAENKRARTMDIDDFISLLHAFNAKGVHFT 280
>gi|400599942|gb|EJP67633.1| dimethyladenosine transferase [Beauveria bassiana ARSEF 2860]
Length = 386
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 240/385 (62%), Gaps = 29/385 (7%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGG----------ISFHKSKGQHILKNPLLVESIVQKAG 53
K++ K PY+ G G F+ + GQHILKNP + ++IV+KA
Sbjct: 2 AKVKTPKRGASKSPYERPGQSNSGSNSKSAKNNVFKFNTNFGQHILKNPGVADAIVEKAY 61
Query: 54 IKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGD 113
+K TD +LE+GPGTGNL+ ++LE K +I VE+D RM E+ +R Q TP +L+V+ GD
Sbjct: 62 LKPTDTVLEVGPGTGNLSVRILERAKKLICVEVDPRMAAEVTKRVQGTPEQRKLEVLLGD 121
Query: 114 VLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYC 173
V+KT+LP FD+C++N PYQISSPL FKLL R +++MFQ+EFA+RL A+PGD LYC
Sbjct: 122 VIKTELPAFDVCISNTPYQISSPLVFKLLAMPNPPRTSVLMFQREFALRLTARPGDTLYC 181
Query: 174 RLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICF 231
RLSVN Q AR++H++KVGKNNFRPPP+V+SSVVRIEP+ K RP V+ EWDG LR+CF
Sbjct: 182 RLSVNAQFWARITHVMKVGKNNFRPPPQVESSVVRIEPKVGKDRPNVSWDEWDGLLRVCF 241
Query: 232 IRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQS-SQNSSLGNTEIGTDTPSLG-----DS 284
+RKNKTL +S K VL+M+E+NYRT A+ + + SL + + D+
Sbjct: 242 VRKNKTLRASWLGTKEVLAMVERNYRTWCAMNGVAVDDSLVEDGADDEDDEMAVDGAEDA 301
Query: 285 NGDQSMGVDDGSDDEMDVEDDDGDS--------DVEGEVSEF-KDKVLAVLRE-GQFEEK 334
G D+ D ++ ++ + +V+E ++K+ VL + + +K
Sbjct: 302 GGMDLDAEDEDDDTPAFFKEAAANAPPAKTKSKRKKTKVAELVREKIRKVLEDVTELADK 361
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
R+ K + +FL LL FN+ GIHFS
Sbjct: 362 RSGKCDENDFLRLLFAFNEEGIHFS 386
>gi|119482754|ref|XP_001261405.1| dimethyladenosine transferase [Neosartorya fischeri NRRL 181]
gi|119409560|gb|EAW19508.1| dimethyladenosine transferase [Neosartorya fischeri NRRL 181]
Length = 393
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/392 (43%), Positives = 228/392 (58%), Gaps = 35/392 (8%)
Query: 3 GGKIRKEKGKQKSGPYQGQG------LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKS 56
G R ++ S PYQ G + F+ GQHILKNP + ++IV KA ++
Sbjct: 2 GKAARGKRNAPSSSPYQKPGGAPLSKAASAIFKFNTDIGQHILKNPTIADAIVDKANVQP 61
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
+ +LE+GPGTG LT ++LE K VIAVELD RM E+ + Q TP +L+VI GD +K
Sbjct: 62 SQTVLEVGPGTGILTTRILEKAKKVIAVELDPRMAAEVTKTVQGTPAEKKLQVILGDFVK 121
Query: 117 TDL---PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYC 173
TDL P F IC++N PYQISSPL FKLL + I+M Q+EFA+RL+A+PGD LY
Sbjct: 122 TDLSKLPPFQICISNTPYQISSPLIFKLLSMPNPPKTCILMVQREFALRLIARPGDSLYS 181
Query: 174 RLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIR 233
RLSVN Q +R+SH++KVGKNNFRPPP+V+SSVVRIEP+ RP ++ EWDG LRICF+R
Sbjct: 182 RLSVNAQFFSRISHVMKVGKNNFRPPPQVESSVVRIEPKADRPNISWDEWDGMLRICFVR 241
Query: 234 KNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI-GTDTPSLGDSNGDQSMGV 292
KNKTL + F V +++E+N+ T ++ + + + G D +L + D MG
Sbjct: 242 KNKTLRAGFMATKVRALIERNWITWVSMHPEKVTQADIDFLQGKDVSALQGVDEDMDMGQ 301
Query: 293 D-----DGSDDEMDV------EDDDGDSDVEGEVSEFKD--------------KVLAVLR 327
D +G DDE D+ E+D + +G + D K+ VL
Sbjct: 302 DGDEPVEGGDDEDDIFMDLGGENDAPVTTSKGSLVAIGDQQVPRAMVTKLVQAKIQQVLE 361
Query: 328 EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ RA K + FL LL FN GIHFS
Sbjct: 362 QANLANARAQKCDENNFLRLLHGFNTEGIHFS 393
>gi|452002575|gb|EMD95033.1| hypothetical protein COCHEDRAFT_1201497 [Cochliobolus
heterostrophus C5]
Length = 383
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 177/398 (44%), Positives = 233/398 (58%), Gaps = 54/398 (13%)
Query: 1 MAGGKIRKEKGK-QKSGPYQ----GQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGI 54
M K ++ KG S PY + A I K GQHILKNP + +IVQKA +
Sbjct: 1 MPKAKQKRSKGADNNSSPYSKPTSAKAAAAHSIFKMDKDLGQHILKNPGVATAIVQKAHL 60
Query: 55 KSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV 114
K +D +LE+GPGTGNLT +L+A K V AVE+D RM EL +R Q +P RL + GDV
Sbjct: 61 KQSDHVLEVGPGTGNLTVLILKAVKQVTAVEMDPRMAAELTKRVQGSPEEKRLTIRLGDV 120
Query: 115 LKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCR 174
+K +LP FD+C++N PYQISSPL FKLL Q RC ++MFQ+EFAMRL A+PG+KLY R
Sbjct: 121 IKAELPRFDVCISNTPYQISSPLVFKLLALQHPPRCCVLMFQREFAMRLFARPGEKLYSR 180
Query: 175 LSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRK 234
LSVN Q+ ++VSH++KVG+NNF PPP+V+S+VVRIEP+ PRPQ+ EWDG LRICF+RK
Sbjct: 181 LSVNVQMWSKVSHVMKVGRNNFNPPPQVESNVVRIEPKNPRPQIAYEEWDGLLRICFVRK 240
Query: 235 NKTLSSIFR-LKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVD 293
N+TL + F VL +L NYR L +QN D P + D+ D S
Sbjct: 241 NRTLRASFMGTAAVLELLASNYR----LYCAQN----------DIP-VDDTPLDPSEIAA 285
Query: 294 DGSDDEMDVEDD------------------------------DGDSDVEGEVSEF-KDKV 322
+ MDV+D+ + +G ++E ++KV
Sbjct: 286 AEEAETMDVDDEFKGFSDPDDPDDELPDFFKQLQAESKKSKNGANRKRKGRLAELVREKV 345
Query: 323 LAVLR-EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VL E Q +KRA + +FL LL FN+ GIHFS
Sbjct: 346 RKVLEDETQLADKRARLCDEADFLKLLYAFNQEGIHFS 383
>gi|169625150|ref|XP_001805979.1| hypothetical protein SNOG_15844 [Phaeosphaeria nodorum SN15]
gi|111055562|gb|EAT76682.1| hypothetical protein SNOG_15844 [Phaeosphaeria nodorum SN15]
Length = 378
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 177/386 (45%), Positives = 236/386 (61%), Gaps = 44/386 (11%)
Query: 8 KEKGKQKSG--------PYQGQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTD 58
K+K K+ SG P + A I K GQHILKNP + +IVQKA +K +D
Sbjct: 3 KDKRKRPSGADSSPYAKPTSAKASAAHSIFKMDKDLGQHILKNPGVASAIVQKAFLKQSD 62
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
+LE+GPGTGNLT +L+A K V AVE+D RM EL +R Q TP + RLKV+ GDV+KT+
Sbjct: 63 HVLEVGPGTGNLTVLILKAAKAVTAVEMDPRMAAELTKRVQGTPEAKRLKVMLGDVIKTE 122
Query: 119 LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVN 178
LP+FD+C++N PYQISSPL FKLL R I+MFQ+EFAMRL A+PG+KLY RLSVN
Sbjct: 123 LPHFDVCISNTPYQISSPLVFKLLSLPSPPRSCILMFQREFAMRLFAKPGEKLYSRLSVN 182
Query: 179 TQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
Q+ A+VSH++KVG+NNF PPP V+S+VVRIEP+ PRPQ+ EWDG LRI F+RKN+TL
Sbjct: 183 VQMWAKVSHIMKVGRNNFNPPPLVESNVVRIEPKFPRPQIAYEEWDGLLRIAFVRKNRTL 242
Query: 239 -SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
+S V+ +L NYR L +QN+ I D +G + ++M VD +
Sbjct: 243 RASFLGTAAVVELLASNYR----LFCAQNN------IELDDSPVGPEDEVEAMEVDAAEE 292
Query: 298 D-------------------EMDVE---DDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEE 333
+ +M E + + +G VSE ++KV VL + + +
Sbjct: 293 EFNGFSDPDDPDDELPDFFKQMQAEGKKKNGLNRKKKGRVSELVREKVRKVLEDDTELAD 352
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHFS 359
KRA + +FL LL FN+ GIHFS
Sbjct: 353 KRARMCDEGDFLKLLYAFNQEGIHFS 378
>gi|401425365|ref|XP_003877167.1| ribosomal RNA adenine dimethylase family protein,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493412|emb|CBZ28699.1| ribosomal RNA adenine dimethylase family protein,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 374
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 222/332 (66%), Gaps = 26/332 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+K GQHILKNPL++ +IV+KA IK TD+++EIGPGTGNLT+KLL+ K VIA E+
Sbjct: 68 GIVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVIEIGPGTGNLTEKLLQTAKKVIAFEI 127
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RM+ EL +RFQ+TP +++L++I+G+ L+ D PYFD CVAN+PY ISS L FKLL P
Sbjct: 128 DPRMMAELNKRFQNTPLASKLQIIRGNCLEQDFPYFDKCVANVPYAISSALVFKLL-KTP 186
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+QL AR SHL+K+ KN+F PPPKV+SSV
Sbjct: 187 TFKCAVLMFQREFALRVCAQPGSEAYCRLSVNSQLLARCSHLMKISKNSFNPPPKVESSV 246
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
+R++P+ P P V+ EWDG +++ F RKNK SSIFR K + L Y + + ++
Sbjct: 247 IRLDPKHPPPDVDFEEWDGLVKMLFSRKNKKSSSIFRTKAAVQALYDKYVSYRKME---- 302
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
G +GT T +G + + SD + + +F+ + +V+
Sbjct: 303 ---GGQPVGTAT------SGAKPLTCSSSSDAGSSM-----------SLEQFRVLLDSVI 342
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ F EKR+ L ++ + +L+ F K GIHF
Sbjct: 343 ADPMF-EKRSRMLDEEALMTMLAHFIKHGIHF 373
>gi|170595215|ref|XP_001902290.1| Probable dimethyladenosine transferase [Brugia malayi]
gi|158590104|gb|EDP28858.1| Probable dimethyladenosine transferase, putative [Brugia malayi]
Length = 306
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 213/358 (59%), Gaps = 53/358 (14%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
M K+R + + +G Q + F+ +GQHILKNP +V +IV+K+ IKSTD +
Sbjct: 1 MGKAKLRIKDASKSNGNMQA-------LPFNIDRGQHILKNPGIVNAIVEKSAIKSTDTV 53
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
E+G GTGNLT LL K VIA E+D RM+ EL++R T +L+V QGDV+KT+ P
Sbjct: 54 FEVGSGTGNLTVALLGKAKKVIACEIDRRMIAELKKRVIGTSNQQKLEVRQGDVIKTEWP 113
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
+FD+CVAN+PYQISSP FKLL +P R A++MFQKEFA RL+A+PG+KLYCRLSVN Q
Sbjct: 114 FFDVCVANLPYQISSPFVFKLLLQRPLPRYAVLMFQKEFADRLLAKPGNKLYCRLSVNVQ 173
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
A+V HL+KV + FRPPPKVDS+VVRI PR P PQ+N EWD LRI F+RKNKTL S
Sbjct: 174 FLAQVEHLMKVKRTEFRPPPKVDSAVVRIAPRNPPPQINFQEWDSLLRIIFLRKNKTLLS 233
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
+F+ V LEK+Y+ L S+ N EI +
Sbjct: 234 LFKNNQVCDSLEKSYKAL--------CSIKNKEIESSF---------------------- 263
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
KDKV ++ E F KRA ++ ++FL LL FNK IHF
Sbjct: 264 ----------------SMKDKVEHIITESGFALKRARQMDXEDFLSLLLAFNKEDIHF 305
>gi|302914906|ref|XP_003051264.1| hypothetical protein NECHADRAFT_41763 [Nectria haematococca mpVI
77-13-4]
gi|256732202|gb|EEU45551.1| hypothetical protein NECHADRAFT_41763 [Nectria haematococca mpVI
77-13-4]
Length = 332
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/335 (48%), Positives = 221/335 (65%), Gaps = 46/335 (13%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNP + ++IV+KA +K TD +LE+GPGTGNLT ++LE K I VE+D R
Sbjct: 39 FNTNFGQHILKNPGVSDAIVEKAFLKPTDTVLEVGPGTGNLTVRILERAKKCICVEVDPR 98
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M E+ +R Q TP +L+V+ GDV+KT+LP FD+C++N PYQISSPL FKLL R
Sbjct: 99 MAAEVTKRVQGTPEQRKLEVLLGDVIKTELPQFDVCISNTPYQISSPLVFKLLSLPNPPR 158
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+++MFQ+EFA+RL A+PGD LYCRLSVN Q A+++H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 159 TSVLMFQREFALRLTARPGDALYCRLSVNAQFWAKITHIMKVGKNNFRPPPQVESSVVRI 218
Query: 210 EPR--KPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQN 266
EP+ K RP V+ EWDG LR+CF+RKNKTL +S K VL+M+E+NYRT A+
Sbjct: 219 EPKTGKDRPNVSWDEWDGLLRVCFVRKNKTLRASWLGTKEVLAMVERNYRTWCAM----- 273
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEF-KDKVLAV 325
NG + VDD ++ +V+E ++K+ V
Sbjct: 274 ------------------NG---VPVDD---------------TLKTKVAELVREKIRKV 297
Query: 326 LRE-GQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
L + + +KR+ K + +FL LL FN+ GIHFS
Sbjct: 298 LEDVTELADKRSGKCDENDFLRLLFAFNEEGIHFS 332
>gi|328855713|gb|EGG04838.1| hypothetical protein MELLADRAFT_49047 [Melampsora larici-populina
98AG31]
Length = 333
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/339 (47%), Positives = 214/339 (63%), Gaps = 48/339 (14%)
Query: 24 GAGGISFHKSK-GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
GA F K GQHILKNPL+ +SIV KA +K+TD +LE+GPGTGNLT K+LE K V+
Sbjct: 40 GASNPIFDTEKLGQHILKNPLVAQSIVDKANLKTTDQVLEVGPGTGNLTVKILEKCKKVL 99
Query: 83 AVELDSRMVLELQRRFQSTPYS-NRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKL 141
VE+D RM EL +RFQ P +L ++ GD LKTDLPYFD+C++N PYQISSPL FKL
Sbjct: 100 VVEMDPRMASELSKRFQGKPQEMKKLDILVGDFLKTDLPYFDVCISNTPYQISSPLVFKL 159
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L H+P FR A++MFQ+EFA+RL A+PG L+CRLSVN QL+++V+HL+KVGK NFRPPP
Sbjct: 160 LAHRPIFRVAVLMFQREFALRLCARPGSSLWCRLSVNVQLYSKVNHLMKVGKANFRPPPL 219
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQA 260
V+SSV+++EP P P + E+DG RICF R+NKT+ +S F K V ML N++T +
Sbjct: 220 VESSVIKLEPINPPPAIKFEEFDGLTRICFNRRNKTIRASFFASKAVKDMLYSNWKTWCS 279
Query: 261 LQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKD 320
Q ++M ED+D S D
Sbjct: 280 QQ-----------------------------------NKMITEDEDN-------FSTLLD 297
Query: 321 KVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K+L + + ++RA+K+ +FL LLS F+K GIHF+
Sbjct: 298 KILT---DSGYSDQRAAKMDVDDFLSLLSCFHKQGIHFA 333
>gi|298706896|emb|CBJ25860.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 310
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 202/312 (64%), Gaps = 4/312 (1%)
Query: 48 IVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRL 107
IV +A +K TDV+LEIGPGTGNLT +LLE K VIAVELD+RMV E+ +R + T + L
Sbjct: 3 IVDRAAVKRTDVVLEIGPGTGNLTVRLLERAKRVIAVELDTRMVREVMKRVEGTEWEKSL 62
Query: 108 KVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQP 167
++IQGDVLK LP+FD+ VAN+PY ISSPL FKLL H+P FRCA+IMFQ+EFA RL A+P
Sbjct: 63 QIIQGDVLKVPLPFFDVLVANVPYNISSPLLFKLLAHRPMFRCAVIMFQEEFAQRLTARP 122
Query: 168 GDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL 227
++CRLSVNTQL A+V L KV +NNFRPPPKVDS VVRIE R P P VN EWDG +
Sbjct: 123 NTDMWCRLSVNTQLLAKVDQLFKVNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMI 182
Query: 228 RICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGD 287
R+ F RK+KTL + K L +L N T +A+ S + G S
Sbjct: 183 RVIFNRKHKTLRATLTTKATLKLLTSNVNTYRAI-SRAAAGGNGPVGGGHAKSKAKPARG 241
Query: 288 QSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYL 347
++ V D D+E + E D GD +E K+ V +VL E +RA+ + + L L
Sbjct: 242 AAVAV-DAMDEEKEGEGDVGDG--RATEAEVKEMVESVLERESLEGRRAASMDIDDLLAL 298
Query: 348 LSLFNKAGIHFS 359
LS FN+ G+HF+
Sbjct: 299 LSAFNEKGVHFA 310
>gi|70987085|ref|XP_749024.1| dimethyladenosine transferase [Aspergillus fumigatus Af293]
gi|66846654|gb|EAL86986.1| dimethyladenosine transferase [Aspergillus fumigatus Af293]
gi|159123206|gb|EDP48326.1| dimethyladenosine transferase [Aspergillus fumigatus A1163]
Length = 392
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 227/392 (57%), Gaps = 36/392 (9%)
Query: 3 GGKIRKEKGKQKSGPYQGQGL----GAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKST 57
G R ++ S PYQ G A I F+ GQHILKNP + ++IV KA ++ +
Sbjct: 2 GKAARGKRNAPSSSPYQKPGAPLSKAASAIFKFNTDIGQHILKNPTIADAIVDKANVQPS 61
Query: 58 DVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
+LE+GPGTG LT ++LE K VIAVELD RM E+ + Q TP +L+VI GD +KT
Sbjct: 62 QTVLEVGPGTGILTTRILEKAKKVIAVELDPRMAAEVTKTVQGTPAEKKLQVILGDFVKT 121
Query: 118 DL---PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCR 174
DL P F IC++N PYQISSPL FKLL + I+M Q+EFA+RL+A+PGD LY R
Sbjct: 122 DLSKLPPFQICISNTPYQISSPLIFKLLSMPNPPKTCILMVQREFALRLIARPGDSLYSR 181
Query: 175 LSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRK 234
LSVN Q +R+SH++KVGKNNFRPPP+V+SSVVRIEP+ RP ++ EWDG LRICF+RK
Sbjct: 182 LSVNAQFFSRISHIMKVGKNNFRPPPQVESSVVRIEPKADRPNISWDEWDGMLRICFVRK 241
Query: 235 NKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI-GTDTPSLGDSNGDQSMGVD 293
NKTL + F V +++E+N+ T ++ + + + G D +L + D M D
Sbjct: 242 NKTLRAGFMATKVRALIERNWITWVSMHPEKVTQADIDFLQGKDVSALQSVDEDMDMDQD 301
Query: 294 -----DGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA---------------------VLR 327
G DDE D+ D G + E V+ K ++A VL
Sbjct: 302 GDEAVQGGDDEDDIFMDLG-GETEAPVTTSKGSLVAIGDQQVPRAMVTKLVQAKIQRVLE 360
Query: 328 EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ RA K + FL LL FN GIHFS
Sbjct: 361 QTNLANARAQKCDENNFLRLLHGFNTEGIHFS 392
>gi|440793386|gb|ELR14572.1| dimethyladenosine transferase [Acanthamoeba castellanii str. Neff]
Length = 294
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 171/356 (48%), Positives = 225/356 (63%), Gaps = 63/356 (17%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEI 63
GK++KE+ +++ + Q +KS GQH+LKNP ++E IV KA +KSTDV+LEI
Sbjct: 2 GKVKKERAGKEA---RQQAAPMHEFQMNKSFGQHLLKNPQIIEGIVTKAKLKSTDVVLEI 58
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD 123
GPGTGNLT K+L K VIAVELD RMV ELQ+R Q T + ++L++I D +K +LPYFD
Sbjct: 59 GPGTGNLTMKMLPLVKKVIAVELDPRMVAELQKRVQGTAHGHKLELILCDFMKVNLPYFD 118
Query: 124 ICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
+CVAN+PYQISSPL FKLL H+P RCA++MFQ+EFAMRLVA PGD LYCRLS++
Sbjct: 119 VCVANVPYQISSPLVFKLLSHRPVPRCAVLMFQREFAMRLVAPPGDPLYCRLSIS----- 173
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
K+NFRPPPKV+SSVVRI+P+ P P +N EWDG +R+CF RKNK+LS+IFR
Sbjct: 174 ---------KHNFRPPPKVESSVVRIKPKNPPPPINFEEWDGLVRLCFTRKNKSLSAIFR 224
Query: 244 LKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVE 303
K+V+ +L+ NY T AL + + + +G D
Sbjct: 225 AKSVIDLLQSNYSTYCALNNVK--------------------------LPEGFD------ 252
Query: 304 DDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K KV+ +L + F EKR+SKL +FL LLS FN+ GIHF+
Sbjct: 253 --------------LKTKVIEILEQNDFLEKRSSKLDIDDFLRLLSCFNQEGIHFA 294
>gi|396498944|ref|XP_003845352.1| similar to dimethyladenosine transferase dimethyltransferase
[Leptosphaeria maculans JN3]
gi|312221933|emb|CBY01873.1| similar to dimethyladenosine transferase dimethyltransferase
[Leptosphaeria maculans JN3]
Length = 379
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 225/353 (63%), Gaps = 34/353 (9%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQHILKNP + +IVQKA +K +D +LE+GPGTGNLT +L+A K V AVE+D RM
Sbjct: 36 KDLGQHILKNPGVASAIVQKAYLKQSDHVLEVGPGTGNLTVLILKAAKAVTAVEMDPRMA 95
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
EL +R Q T + RLKV+ GDV+KT+LP+FD+C++N PYQISSPL FKLL R
Sbjct: 96 AELTKRVQGTAEAKRLKVMLGDVIKTELPHFDVCISNTPYQISSPLVFKLLSLPSPPRSC 155
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
I+MFQ+EFAMRL A+PG+KLY RLSVN Q+ A+VSH++KVG+NNF PPP+V+S+VVRIEP
Sbjct: 156 ILMFQREFAMRLFAKPGEKLYSRLSVNVQMWAKVSHIMKVGRNNFNPPPQVESNVVRIEP 215
Query: 212 RKPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLG 270
+ PRPQ+ EWDG LRI F+RKN+TL +S V+ +L NYR L +QN L
Sbjct: 216 KHPRPQIAYDEWDGLLRIAFVRKNRTLRASFLGTAAVVELLASNYR----LFCAQNDILL 271
Query: 271 NTEIGTDTPSLGDSNGDQSMGVDDGSDDEM----------------------DVEDDDGD 308
+ D+P + ++ G++ DD+ + + + +
Sbjct: 272 D-----DSPINPNEGTLEAEGMEVDEDDDFKGFSDPDDPDDELPDFFKQMQSEKKKNGIN 326
Query: 309 SDVEGEVSEF-KDKVLAVLR-EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+G VSE ++KV +L E Q EKRA + +FL LL FN+ GIHFS
Sbjct: 327 RKKKGRVSELVREKVRKILEDETQLAEKRARLCDEGDFLKLLYAFNQEGIHFS 379
>gi|449015973|dbj|BAM79375.1| probable dimethyladenosine transferase [Cyanidioschyzon merolae
strain 10D]
Length = 357
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 154/347 (44%), Positives = 223/347 (64%), Gaps = 19/347 (5%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G FHKS+GQHILKN + +++V+KA ++ TD +LE+G GTGNLT +LL+ K V+A E+
Sbjct: 15 GFPFHKSRGQHILKNAAVTDAMVEKAQLRPTDTVLEVGAGTGNLTVRLLKYAKKVVAFEV 74
Query: 87 DSRMVLELQRRFQS--TPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
D RM++EL +R Q+ ++RL+VI GDVL+ + P+FD+ VANIPYQISSPL F+LL H
Sbjct: 75 DPRMIIELTKRVQALGPELASRLEVIHGDVLRANWPFFDVFVANIPYQISSPLLFRLLAH 134
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+PAFR A+IMFQ+EFA RL+A+PGD Y RL+VN QL ARV HL+KV +N+FRPPP+VDS
Sbjct: 135 RPAFRSAVIMFQREFAQRLIARPGDPAYGRLAVNVQLLARVEHLMKVSRNSFRPPPRVDS 194
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN-YRTLQALQS 263
SVVRI+ R+P P ++ EWDG LR+CF RK++TL S+F V+ +L+ N R
Sbjct: 195 SVVRIQLRQPAPPLDFREWDGLLRLCFARKHRTLGSLFGQSRVVQLLQTNRARIRDEAAK 254
Query: 264 SQNSSLGNTEIGTDTPSLG-----------DSNGDQSMGVDDGSDDEMDVEDDDGDSDVE 312
SQN++ +T + + N S D + +E +DG +
Sbjct: 255 SQNTTSADTTASALMEMVNDTDLALDDTDENENAASSFVPPPDVMDTVPLEAEDGSA--- 311
Query: 313 GEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
++ + ++ +L E + RA+K++ ++FL LL G F+
Sbjct: 312 --LTAVRTEIHGILSEQGLLQTRAAKMSLEDFLRLLCTLQAHGFRFT 356
>gi|1806115|emb|CAA92586.1| dimethylase [Kluyveromyces lactis]
Length = 320
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 157/330 (47%), Positives = 208/330 (63%), Gaps = 40/330 (12%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNPL+ + IV KA IK +D++LEIGPGTGNLT ++LE + V+ + S
Sbjct: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVVRRGVRSS 90
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
+R TP +L+++ GD +KT+LPYFD+C++N PYQISSPL FKL+ R
Sbjct: 91 YGSGRTKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPKPPR 150
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+I+MFQ+EFAMRL+A+PGD LYCRLS N Q+ A V+H++KVGKNNFRPPPKV+SSVVRI
Sbjct: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRI 210
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
E + PRPQV+ EWDG LRI F+RKN+T+++ F+ L +LEKNY+ A QS+
Sbjct: 211 EIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTDLEILEKNYKAFLATQSA----- 265
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
T S GDS ++E K+K+ VL E
Sbjct: 266 ------VPTTSSGDS-----------------------------LINEVKEKIEQVLSET 290
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
EKRA K Q +FL LL F++ GIHF+
Sbjct: 291 GLAEKRAGKCDQTDFLKLLYGFHQVGIHFA 320
>gi|430814011|emb|CCJ28696.1| unnamed protein product [Pneumocystis jirovecii]
Length = 304
Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 166/350 (47%), Positives = 221/350 (63%), Gaps = 48/350 (13%)
Query: 10 KGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGN 69
K K+K+ Q + +G +K GQHILKNPL+ + I+ KA +K +D++LE+G GTGN
Sbjct: 3 KYKEKNNVIQ-KTIGNNIFKLNKDIGQHILKNPLVAQGIIDKADLKPSDIVLEVGSGTGN 61
Query: 70 LTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANI 129
LT K+L+ K VIAVE+D RM +EL +R Q+TP RL+++ GDV+K DLPYFD+C++N
Sbjct: 62 LTVKILQKAKKVIAVEMDPRMSMELVKRVQATPDEKRLEILLGDVIKIDLPYFDVCISNT 121
Query: 130 PYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLL 189
PYQISSPL FKLL P R AI+MFQ+EFAMRLVA+PG+ LYCRLSVN Q+ A+V+H++
Sbjct: 122 PYQISSPLVFKLLKQSPPPRLAILMFQREFAMRLVAKPGEPLYCRLSVNVQMWAKVTHVM 181
Query: 190 KVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
KVGKNNF+PPP+V+SSVV+IEP+ P P ++ EWDG LRICF+RKNKT+ S F+ ++L+
Sbjct: 182 KVGKNNFKPPPQVESSVVKIEPKIPPPPISFEEWDGLLRICFVRKNKTILSGFKTSSILN 241
Query: 250 MLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDS 309
M EKNY + SQN
Sbjct: 242 MCEKNYN----IWCSQN------------------------------------------- 254
Query: 310 DVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
++ + KDK+ VL KRA K +FL LL FNK GIHF+
Sbjct: 255 NIPMDGIPIKDKIEKVLNSVNLGNKRAQKCDDSDFLKLLYAFNKEGIHFA 304
>gi|393911741|gb|EJD76435.1| dimethyladenosine transferase [Loa loa]
Length = 306
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 213/351 (60%), Gaps = 48/351 (13%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K K K+K+ P + A + F+ +GQHILKNP +V +IV+K+ IK+TD + E+G GT
Sbjct: 3 KVKLKKKNTPKTNNSMQA--LPFNTGRGQHILKNPGVVNAIVEKSAIKATDTVFEVGSGT 60
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GNLT L+E K VIA E+D RM+ EL++R T + +L++ QGDV+K + P+FD+C+A
Sbjct: 61 GNLTVVLMEKAKKVIACEIDRRMIAELKKRVIGTSHQQKLEMKQGDVIKMEWPFFDVCIA 120
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PYQISSP F++L +P R A++MFQKEFA RL+A+PG KLYCRLSVN Q A+V H
Sbjct: 121 NLPYQISSPFVFRMLLQRPLPRYAVLMFQKEFADRLLAKPGSKLYCRLSVNVQFLAQVEH 180
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
L+KV + FRPPPKVDS+VVRI PR P PQ+N EWD LRI F+RKNKTL S+F+ V
Sbjct: 181 LMKVKRTEFRPPPKVDSAVVRIAPRNPPPQINFQEWDNLLRIVFLRKNKTLLSLFKNNQV 240
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
LEK+YR L ++++ + S N
Sbjct: 241 CDSLEKSYRALYSIKNKEVESQFN------------------------------------ 264
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+DKV ++ F KRA ++ ++FL LL FNK IHF
Sbjct: 265 ----------IRDKVEHIITGSGFASKRARQMDTEDFLSLLLAFNKEDIHF 305
>gi|340054016|emb|CCC48310.1| putative conserved ribosomal RNA adenine dimethylase family protein
[Trypanosoma vivax Y486]
Length = 387
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/265 (53%), Positives = 196/265 (73%), Gaps = 2/265 (0%)
Query: 4 GKIRKEKGKQKSGPYQGQGLGA-GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
GK K QK+ + G+ GI F+K GQHILKNPL++ +IV+KA IK TD++LE
Sbjct: 78 GKTEPRKTTQKNVVTGAKTGGSQSGIVFNKGFGQHILKNPLVIAAIVEKAAIKPTDIVLE 137
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
IGPGTGNLT+KLL+ K VIA E+D RMV+EL +RFQ T + +L+VI+G+ L+ + PYF
Sbjct: 138 IGPGTGNLTEKLLQTAKKVIAFEVDPRMVVELNKRFQGTTLATKLQVIRGNCLEHEFPYF 197
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D CVAN+PY ISS L FKLL +P F+CA++MFQ+EFA+R+ AQPG + YCRLSVN+QL
Sbjct: 198 DKCVANVPYAISSALVFKLL-KKPNFKCAVLMFQREFALRICAQPGSEAYCRLSVNSQLL 256
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
AR SHL+K+ KN+F PPPKV+SSV+R++P+ P P V+ EWDG ++ F RKNK +SSIF
Sbjct: 257 ARCSHLMKISKNSFNPPPKVESSVIRLDPKHPAPNVDFDEWDGLVKFIFNRKNKKISSIF 316
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNS 267
R KN + L + + + Q ++ ++ +
Sbjct: 317 RTKNAVQTLYEKHCSYQKMEGAKET 341
>gi|322699660|gb|EFY91420.1| dimethyladenosine transferase dimethyltransferase [Metarhizium
acridum CQMa 102]
Length = 390
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/363 (45%), Positives = 228/363 (62%), Gaps = 43/363 (11%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNP + ++IV+KA +K TD +LEIGPGTGNLT ++LE K I VELD R
Sbjct: 38 FNTNFGQHILKNPGVSDAIVEKAYLKPTDTVLEIGPGTGNLTVRILERAKKCICVELDPR 97
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M E+ +R Q TP +L+V+ GDV+KT+LP FD+C++N PYQISSPL FKLL R
Sbjct: 98 MAAEVTKRVQGTPEQRKLEVVLGDVIKTELPQFDVCISNTPYQISSPLVFKLLAMPNPPR 157
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
+++MFQ+EFA+RL A+PGD LY R+SVN Q A+++H++KVGKNNFRPPP+V+SSVVRI
Sbjct: 158 TSVLMFQREFALRLTARPGDPLYSRISVNAQFWAKITHIMKVGKNNFRPPPQVESSVVRI 217
Query: 210 EPR--KPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQN 266
EP+ K RP V+ EWDG LR+CF+RKNKTL +S + VL+M+EKNYRT A+
Sbjct: 218 EPKVGKDRPNVSWDEWDGLLRVCFVRKNKTLRASWLGTREVLTMVEKNYRTWCAMNG--- 274
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD------------------------DEMDV 302
+ D + + ++ M +D G+ EM+
Sbjct: 275 -------VAVDETLVEGGDAEEEMDMDAGAGAGAGLGAEEGDGMDVDDDDAPDFFKEMNR 327
Query: 303 EDDDG----DSDVEGEVSEF-KDKVLAVLRE-GQFEEKRASKLTQQEFLYLLSLFNKAGI 356
+ + +V+E ++K+ VL + + +KRA K + +FL LL FN+ GI
Sbjct: 328 SAGNAPKTKSKRKKTKVAELVREKIRKVLEDVTELADKRAGKCDENDFLRLLFAFNEEGI 387
Query: 357 HFS 359
HFS
Sbjct: 388 HFS 390
>gi|327262970|ref|XP_003216295.1| PREDICTED: probable dimethyladenosine transferase-like [Anolis
carolinensis]
Length = 328
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 154/311 (49%), Positives = 201/311 (64%), Gaps = 46/311 (14%)
Query: 49 VQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLK 108
++ A + TDV+LE+GPGTGN+T K+LE K V+A E+D ++ ELQ+R Q TP +N+L+
Sbjct: 64 MKHASLYPTDVVLEVGPGTGNMTVKMLEKVKRVVACEVDVKLAGELQKRVQGTPLANKLE 123
Query: 109 VIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPG 168
+ GDVLK+DLP+FD CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFA+RLVA+PG
Sbjct: 124 IKIGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFALRLVAKPG 183
Query: 169 DKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLR 228
LYCRLSVNTQL ARV HL+KVGKNNF+PPPKV+SSVVRIEP+ P P +N EWDG LR
Sbjct: 184 SPLYCRLSVNTQLLARVDHLMKVGKNNFKPPPKVESSVVRIEPKNPPPPINFQEWDGLLR 243
Query: 229 ICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQ 288
I F+RKNKTL+++F V +LE+NYR + SQN N EI
Sbjct: 244 IVFVRKNKTLAAVFNSTAVKRLLEQNYR----IHCSQN----NLEI-------------- 281
Query: 289 SMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLL 348
E + + +L++ + EKRA + +F+ +L
Sbjct: 282 ------------------------PENFNIGNLIHEILKDTGYSEKRARVMDIDDFISVL 317
Query: 349 SLFNKAGIHFS 359
FN GIHFS
Sbjct: 318 HGFNSKGIHFS 328
>gi|402087269|gb|EJT82167.1| hypothetical protein GGTG_02141 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 412
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/378 (45%), Positives = 227/378 (60%), Gaps = 53/378 (14%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F K GQHILKNP + E IV+KA ++ TD +LE+GPGTGNL+ K+LE ++AVELD R
Sbjct: 40 FKKDYGQHILKNPGIAEEIVKKAFLRPTDTVLEVGPGTGNLSVKILERAARLVAVELDPR 99
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R Q P +L+VI GDV+K +LP FD+ ++N PYQISSPL FK+L R
Sbjct: 100 MGAELTKRVQGRPEQRKLEVILGDVIKAELPPFDVLISNTPYQISSPLVFKVLALPNPPR 159
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
CA++MFQ+EFA RL AQPGD LY RLSVN QL ++V+H++KVGK NF+PPP+V+SSVVRI
Sbjct: 160 CAVLMFQREFASRLTAQPGDSLYSRLSVNVQLFSKVTHIMKVGKGNFKPPPQVESSVVRI 219
Query: 210 EPR--KPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQS-SQ 265
EP+ + RPQV+ EWDG LR+CF RKNKTL +S +K VL+M E+NY+ + +
Sbjct: 220 EPKTGRERPQVSWDEWDGMLRVCFNRKNKTLHASFLGVKEVLAMAERNYKVWCTMNGVAV 279
Query: 266 NSSL---GNTEIGTDTPSLGDSNGDQSMGVDD---------GSDDEMDVEDDDGDSDVEG 313
+ S+ G T G D + D D DD G M+V+ DDGD +
Sbjct: 280 DESVVEGGGTAAGAD---VDDVEMDTDGANDDADEDDDEGWGGCGSMEVDGDDGDEEAIP 336
Query: 314 EVSEFKD--------------------------------KVLAVLREGQFEEKRASKLTQ 341
E FKD K+ VL + E+RA+K Q
Sbjct: 337 EF--FKDRKKDTAAASAASAVAKTPSRRKKTKVGELVRSKLEKVLADTGLAEQRANKCDQ 394
Query: 342 QEFLYLLSLFNKAGIHFS 359
+FL LL+ FN GIHF+
Sbjct: 395 NDFLRLLAAFNAEGIHFA 412
>gi|322710252|gb|EFZ01827.1| dimethyladenosine transferase dimethyltransferase [Metarhizium
anisopliae ARSEF 23]
Length = 388
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/397 (43%), Positives = 240/397 (60%), Gaps = 51/397 (12%)
Query: 4 GKIRKEK-GKQKSGPY---QGQGLGAGGIS------FHKSKGQHILKNPLLVESIVQKAG 53
GK+++ K S PY G +G S F+ + GQHILKNP + ++IV+KA
Sbjct: 2 GKVKQSKRNGAPSSPYDRPSGGSSNSGANSKNNVFKFNTNFGQHILKNPGVSDAIVEKAY 61
Query: 54 IKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGD 113
+K TD +LEIGPGTGNLT ++LE K I VELD RM E+ +R Q TP +L+VI GD
Sbjct: 62 LKPTDTVLEIGPGTGNLTVRILERAKKCICVELDPRMAAEVTKRVQGTPEQRKLEVILGD 121
Query: 114 VLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYC 173
V+KT+LP FD+C++N PYQISSPL FKLL R +++MFQ+EFA+RL A+PG+ LY
Sbjct: 122 VIKTELPQFDVCISNTPYQISSPLVFKLLAMPNPPRTSVLMFQREFALRLTARPGEPLYS 181
Query: 174 RLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICF 231
R+SVN Q A+++H++KVGKNNFRPPP+V+SSVVRIEP+ K RP V+ EWDG LR+CF
Sbjct: 182 RISVNAQFWAKITHIMKVGKNNFRPPPQVESSVVRIEPKVGKDRPNVSWDEWDGLLRVCF 241
Query: 232 IRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSM 290
+RKNKTL +S + VL+M+EKNYRT A+ + D + + ++ M
Sbjct: 242 VRKNKTLRASWLGTREVLTMVEKNYRTWCAMNG----------VAVDETLVEGDDAEEEM 291
Query: 291 GVDDGSDDEMDVEDDDGDSDVEGEVSEF---------------------------KDKVL 323
D G+ + E+ DG + + +F ++K+
Sbjct: 292 DTDAGAGAGLGAEEGDGMDVDDDDAPDFFKQMNRSAGSAPKTKSKRKKTKVAELVREKIR 351
Query: 324 AVLRE-GQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VL + + +KRA K + +FL LL FN+ GIHFS
Sbjct: 352 KVLEDVTELADKRAGKCDENDFLRLLFAFNEEGIHFS 388
>gi|401881467|gb|EJT45767.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Trichosporon asahii var.
asahii CBS 2479]
gi|406701624|gb|EKD04740.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Trichosporon asahii var.
asahii CBS 8904]
Length = 342
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 215/357 (60%), Gaps = 40/357 (11%)
Query: 11 GKQKSGPYQGQGLGAGGIS-------FHKSK-GQHILKNPLLVESIVQKAGIKSTDVILE 62
Q+ G Q G A G + F+ + GQHIL NPL+ + IV KA +K TDV+LE
Sbjct: 18 ASQRPGKTQEPGTNATGSAGGARNHLFNTERFGQHILTNPLVAQGIVDKAELKPTDVVLE 77
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPGTGNLT ++L A + V AVE+D RM E+Q+R TP +L +I GD +K DLPYF
Sbjct: 78 VGPGTGNLTVRILTACRKVTAVEMDPRMAAEVQKRVLGTPQQKKLDIILGDFVKADLPYF 137
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+C++N PYQISSPL FKLL H+P RCA++MFQ+EFA+RL A+PG KL+CRLS N Q+
Sbjct: 138 DVCISNTPYQISSPLVFKLLSHRPLIRCAVLMFQREFALRLCAKPGSKLWCRLSANVQMF 197
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
ARV H++KVGK NFRPPP+V+SSVVRI+P P P V E+DG RI F R +KTL + F
Sbjct: 198 ARVEHVMKVGKGNFRPPPQVESSVVRIKPYNPPPAVKFEEFDGLNRIVFSRSHKTLRANF 257
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDV 302
+ K + M+EKNY+T A+ +DD D +
Sbjct: 258 KAKGIKEMIEKNYKTWCAMNEKM--------------------------IDDDFDAWALI 291
Query: 303 EDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
E+ ++ V + + ++ A F + RA+ L+ + L LL FN GIHF+
Sbjct: 292 EEVLAETLVPAKTLDENEQRPA------FGDMRAAVLSGNDLLELLKAFNLRGIHFA 342
>gi|71013449|ref|XP_758591.1| hypothetical protein UM02444.1 [Ustilago maydis 521]
gi|46098249|gb|EAK83482.1| hypothetical protein UM02444.1 [Ustilago maydis 521]
Length = 334
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 151/326 (46%), Positives = 201/326 (61%), Gaps = 48/326 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNPL+ + IV KA +K TD++LE+GPGTGNLT ++LE K VE+D RM EL
Sbjct: 56 GQHILKNPLVAQGIVDKANLKPTDMVLEVGPGTGNLTVRILEKAKKTTVVEMDPRMAAEL 115
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L ++ GD KTDLPYFD+C++N PYQISSPL FKLL H+P FRCAI+M
Sbjct: 116 SKRVQGKPEQRKLDIMLGDFCKTDLPYFDVCISNTPYQISSPLVFKLLSHRPLFRCAILM 175
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RL+A+PGD L+CRLS N QL+++V H++KV +N+FRPPP+V+SSVVRI P P
Sbjct: 176 FQREFALRLIARPGDNLWCRLSANVQLYSKVDHIMKVSRNSFRPPPQVESSVVRITPLNP 235
Query: 215 RPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
P + E+DG RI F R+NKT+ +S F + V+ MLE NY+T A++
Sbjct: 236 PPAIPFEEFDGLTRIVFSRRNKTVRASFFDARGVIDMLESNYKTYCAVK----------- 284
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEE 333
++ E F D V VL E E
Sbjct: 285 ------------------------------------EIMPEQGSFADMVKQVLVETGSAE 308
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LL+ F++ GIHFS
Sbjct: 309 NRAAKMDIDDLLTLLAAFHEKGIHFS 334
>gi|297294370|ref|XP_001085304.2| PREDICTED: probable dimethyladenosine transferase [Macaca mulatta]
Length = 284
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 198/336 (58%), Gaps = 75/336 (22%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
AGG+ F+ GQHILKNPL++ SI+ K V+A
Sbjct: 24 SAGGLMFNTGIGQHILKNPLIINSIIDK-----------------------------VVA 54
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL
Sbjct: 55 CELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLL 114
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+P FRCAI+MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+
Sbjct: 115 HRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVE 174
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVVRIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 175 SSVVRIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI------ 228
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S+ N I D DK+
Sbjct: 229 --HCSVHNIIIPEDF--------------------------------------SIADKIQ 248
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 249 QILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 284
>gi|389642445|ref|XP_003718855.1| dimethyladenosine transferase [Magnaporthe oryzae 70-15]
gi|351641408|gb|EHA49271.1| dimethyladenosine transferase [Magnaporthe oryzae 70-15]
gi|440466757|gb|ELQ36004.1| dimethyladenosine transferase [Magnaporthe oryzae Y34]
gi|440481770|gb|ELQ62318.1| dimethyladenosine transferase [Magnaporthe oryzae P131]
Length = 390
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 227/359 (63%), Gaps = 39/359 (10%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F K GQHILKNP + E IV+KA ++ TD +LE+GPGTGNL+ K+LE + +IAVELD R
Sbjct: 42 FKKDYGQHILKNPGIAEEIVKKAYLRPTDTVLEVGPGTGNLSVKILERAQKLIAVELDPR 101
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M EL +R Q P +L+VI GDV+K DLP FD+ ++N PYQISSPL FK+L R
Sbjct: 102 MGAELTKRVQGKPEQRKLEVILGDVIKADLPPFDVLISNTPYQISSPLVFKMLALPNPPR 161
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
C ++MFQ+EF+ RL A+PG+ LY RLSVN QL ++V+H++KVGK NF+PPP+V+SSVVRI
Sbjct: 162 CMVLMFQREFSSRLTARPGEALYSRLSVNVQLFSKVTHIMKVGKANFKPPPQVESSVVRI 221
Query: 210 EPR--KPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQN 266
EP+ + RP V+ EWDG LR+CF RKNKTL +S +K VL+M E+NY+ +
Sbjct: 222 EPKLGRERPNVSWEEWDGMLRVCFNRKNKTLHASFLGVKEVLAMAERNYKVWCTM----- 276
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGS-DDEMDVEDDDGDSDVEGEVSEF------- 318
+I D + ++GD M DDG MDV++D GD+ + +V EF
Sbjct: 277 -----NDIPIDESVVETTDGDVEMDADDGEWGGIMDVDEDGGDAGDDDDVPEFFKEKAPA 331
Query: 319 ------------------KDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ K+ VL++ E+RA+K Q +FL LL+ FN GIHF+
Sbjct: 332 PVAKTPSKRKKTKVGELVRSKIEKVLKDTDLAEQRANKCDQNDFLRLLAAFNAEGIHFA 390
>gi|336366365|gb|EGN94712.1| hypothetical protein SERLA73DRAFT_187771 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379035|gb|EGO20191.1| hypothetical protein SERLADRAFT_477564 [Serpula lacrymans var.
lacrymans S7.9]
Length = 321
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 213/357 (59%), Gaps = 50/357 (14%)
Query: 7 RKEKGKQKSGPYQGQGLGAGGIS---FHKSK-GQHILKNPLLVESIVQKAGIKSTDVILE 62
R + K+ P G + + F+ + GQHILKNPL+ + IV KA ++ TD +LE
Sbjct: 11 RAHQAPIKAKPTNNSGESSSAVRNPIFNTERFGQHILKNPLVAQGIVDKANLRPTDKVLE 70
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPGTGNLT ++LE K V AVE+D RM EL +R Q P +L +I GD +K DLPYF
Sbjct: 71 VGPGTGNLTVRILEKAKHVTAVEMDPRMAAELTKRVQGKPEQRKLDIIIGDFVKADLPYF 130
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+C++N PYQISSPL F+LL H+P R AI+MFQ+EFA+RLVA+PG +L+ RLS N QL+
Sbjct: 131 DVCISNTPYQISSPLVFRLLSHRPLCRVAILMFQREFALRLVARPGTELWSRLSANVQLY 190
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
++V H++KVGKNNFRP PKV+SSVVRI P P P V E+DG RI F R+NKT+ + F
Sbjct: 191 SKVDHIMKVGKNNFRPAPKVESSVVRIAPLDPPPPVKFEEFDGLNRIIFSRRNKTIHASF 250
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDV 302
K V+ M+E N+RT + Q ++M
Sbjct: 251 MAKGVIDMMESNWRTWCSEQ-----------------------------------NQMIE 275
Query: 303 EDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+D D S+VE VL E F E RA+K+ + L LLS F+ AGIHF+
Sbjct: 276 DDVDMKSNVE-----------KVLNETGFSESRAAKMDVDDLLKLLSAFHDAGIHFA 321
>gi|42573814|ref|NP_975003.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
gi|10177517|dbj|BAB10912.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana]
gi|332010821|gb|AED98204.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
Length = 380
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/332 (49%), Positives = 217/332 (65%), Gaps = 23/332 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ KSKGQH+L N +++SIV+ + I+ TD +LEIGPGTGNLT KLLEA + V+AVEL
Sbjct: 60 GLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVEL 119
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV L++R ++++L +IQ DVLKTD P+FD+ VANIPY ISSPL KL++
Sbjct: 120 DKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLVVANIPYNISSPLVAKLVYGSN 179
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FR A ++ QKEF+ RL+A PGD + RL+VN +L A V ++ V K F PPPKVDSSV
Sbjct: 180 TFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVKFVMDVSKREFVPPPKVDSSV 239
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
+RI P++ P VN EW F R CF +KNKTL S+FR K K LQ+L + ++
Sbjct: 240 IRITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQK-------KKVMELQSLSAGRH 292
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
S N E+ T GDS+ D +DG DD + ++ D S FK++V+ +L
Sbjct: 293 GS--NVEVMNQTG--GDSDSDVE---EDGKDDLLCLDTD---------ASMFKERVIEIL 336
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
R FEEKR SKL+ +E L+LLSLFN+AGI F
Sbjct: 337 RTNGFEEKRPSKLSHRELLHLLSLFNQAGIFF 368
>gi|300120833|emb|CBK21075.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 207/328 (63%), Gaps = 42/328 (12%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQH +KN +V +I++K+GIK TD++LEIGPG G LT +LL+ K VIA+E D RMV E+
Sbjct: 26 GQHFIKNISVVHNIIEKSGIKPTDIVLEIGPGAGILTMELLKKAKKVIAIEKDERMVHEI 85
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
Q++ Q T Y + L+++ GD LK +LPYFD+CV+N+PY ISS + FKLL H+P FR AI+M
Sbjct: 86 QKKVQGTEYESHLEIVYGDFLKVELPYFDLCVSNVPYVISSGVVFKLLQHRPIFRAAILM 145
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EF RL A+PGD +Y R+SVNTQL AR LLKVG+NNF PPPKV+S V RIEP P
Sbjct: 146 FQEEFTQRLCAKPGDNMYSRISVNTQLLARTQQLLKVGRNNFNPPPKVESRVCRIEPLNP 205
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
RP+VN EWDG + ICF RKNKTL++IF+ K+VL +L+KNY AL+
Sbjct: 206 RPEVNFEEWDGLVNICFHRKNKTLAAIFKNKSVLELLQKNYEMYCALKDI---------- 255
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV---LREGQF 331
P GD D++ V E + + L G+
Sbjct: 256 ---VPR--------------------------GDMDIKQVVEEVLNSCWGISGSLGVGEL 286
Query: 332 EEKRASKLTQQEFLYLLSLFNKAGIHFS 359
++RASK++ ++F+ LL F IHF+
Sbjct: 287 GQQRASKMSIEDFMRLLDAFLDRNIHFT 314
>gi|388858431|emb|CCF48025.1| probable rRNA (adenine-N6,N6-)-dimethyltransferase [Ustilago
hordei]
Length = 334
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/326 (45%), Positives = 201/326 (61%), Gaps = 48/326 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNPL+ + IV KA +K TD++LE+GPGTGNLT ++LE K VE+D RM EL
Sbjct: 56 GQHILKNPLVAQGIVDKANLKPTDMVLEVGPGTGNLTVRILEKAKKTTVVEMDPRMAAEL 115
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L ++ GD KT+LPYFD+C++N PYQISSPL FKLL H+P FRCAI+M
Sbjct: 116 SKRVQGKPEQRKLDIMLGDFCKTELPYFDVCISNTPYQISSPLVFKLLSHRPLFRCAILM 175
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RL+A+PGD L+CRLS N QL+++V H++KV +N+FRPPP+V+SSVVRI P P
Sbjct: 176 FQREFALRLIARPGDNLWCRLSANVQLYSKVDHIMKVSRNSFRPPPQVESSVVRITPLNP 235
Query: 215 RPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
P + E+DG RI F R+NKT+ +S F + V+ MLE NY+T A++
Sbjct: 236 PPAIPFEEFDGLTRIVFSRRNKTVRASFFDARGVIDMLESNYKTYCAVK----------- 284
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEE 333
++ E F D V +L + E
Sbjct: 285 ------------------------------------EIMPEEGNFADMVKQILIDTACAE 308
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LL+ F++ GIHFS
Sbjct: 309 DRAAKMDIDDLLKLLAAFHEKGIHFS 334
>gi|261194984|ref|XP_002623896.1| dimethyladenosine transferase [Ajellomyces dermatitidis SLH14081]
gi|239587768|gb|EEQ70411.1| dimethyladenosine transferase [Ajellomyces dermatitidis SLH14081]
Length = 330
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/324 (52%), Positives = 207/324 (63%), Gaps = 26/324 (8%)
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
+LEIGPGTGNLT K+LE K VIAVELD RM E+ +R Q P RL+V+ GDV+KTD
Sbjct: 10 TVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEVTKRVQGKPEQKRLEVLLGDVIKTD 69
Query: 119 LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVN 178
LPYFD+C++N PYQISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN
Sbjct: 70 LPYFDVCISNTPYQISSPLTFKLLAINPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVN 129
Query: 179 TQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
Q+ AR+ H++KVGKNNF+PPP V+SSVVRI P+ PRPQ++ EWDG LR+ F+RKNKT+
Sbjct: 130 AQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRVAFVRKNKTM 189
Query: 239 -SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDS---------NGDQ 288
SS +VL MLE NYRT A Q++ G E D L D+ D
Sbjct: 190 RSSFLGTTSVLDMLESNYRTWCA-QNNIPVEDGPVEGLQD--ELMDTMEEQGELEEELDG 246
Query: 289 SMGVDDGSDDEMDVEDD-----------DGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKR 335
+M VDD D DD + +G+V E ++KV VL E +KR
Sbjct: 247 AMDVDDDGDVPEFFADDKPKLNSNPSKENPGRKKKGKVRELVREKVRQVLEVETGLADKR 306
Query: 336 ASKLTQQEFLYLLSLFNKAGIHFS 359
A + EFL LL FN+ GIHFS
Sbjct: 307 ARMCDEGEFLKLLWAFNQKGIHFS 330
>gi|239610737|gb|EEQ87724.1| dimethyladenosine transferase [Ajellomyces dermatitidis ER-3]
Length = 330
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/324 (52%), Positives = 207/324 (63%), Gaps = 26/324 (8%)
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
+LEIGPGTGNLT K+LE K VIAVELD RM E+ +R Q P RL+V+ GDV+KTD
Sbjct: 10 TVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEVTKRVQGKPEQKRLEVLLGDVIKTD 69
Query: 119 LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVN 178
LPYFD+C++N PYQISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN
Sbjct: 70 LPYFDVCISNTPYQISSPLTFKLLAIDPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVN 129
Query: 179 TQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
Q+ AR+ H++KVGKNNF+PPP V+SSVVRI P+ PRPQ++ EWDG LR+ F+RKNKT+
Sbjct: 130 AQMWARIDHIMKVGKNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRVAFVRKNKTM 189
Query: 239 -SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDS---------NGDQ 288
SS +VL MLE NYRT A Q++ G E D L D+ D
Sbjct: 190 RSSFLGTTSVLDMLESNYRTWCA-QNNIPVEDGPVEGLQD--ELMDTMEEQGELEEELDG 246
Query: 289 SMGVDDGSDDEMDVEDD-----------DGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKR 335
+M VDD D DD + +G+V E ++KV VL E +KR
Sbjct: 247 AMDVDDDGDVPEFFADDKPKLNSNPSKENPGRKKKGKVRELVREKVRQVLEVETGLADKR 306
Query: 336 ASKLTQQEFLYLLSLFNKAGIHFS 359
A + EFL LL FN+ GIHFS
Sbjct: 307 ARMCDEGEFLKLLWAFNQKGIHFS 330
>gi|343427662|emb|CBQ71189.1| probable rRNA (adenine-N6,N6-)-dimethyltransferase [Sporisorium
reilianum SRZ2]
Length = 334
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 201/326 (61%), Gaps = 48/326 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNPL+ + IV KA +K TD++LE+GPGTGNLT ++LE K VE+D RM EL
Sbjct: 56 GQHILKNPLVAQGIVDKANLKPTDMVLEVGPGTGNLTVRILEKAKKTTVVEMDPRMAAEL 115
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L ++ GD KT+LPYFD+C++N PYQISSPL FKLL H+P FRCAI+M
Sbjct: 116 SKRVQGKPEQRKLDIMIGDFCKTELPYFDVCISNTPYQISSPLVFKLLSHRPLFRCAILM 175
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RL+A+PGD L+CRLS N QL+++V H++KV +N+FRPPP+V+SSVVRI P P
Sbjct: 176 FQREFALRLIARPGDNLWCRLSANVQLYSKVDHIMKVSRNSFRPPPQVESSVVRITPLNP 235
Query: 215 RPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
P + E+DG RI F R+NKT+ +S F + VL MLE NY+T A++
Sbjct: 236 PPAIPFEEFDGLTRIVFSRRNKTVRASFFDARGVLDMLESNYKTYCAVK----------- 284
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEE 333
++ E F D V VL + E
Sbjct: 285 ------------------------------------EIMPEEGNFADMVKQVLVDTGCAE 308
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LL+ F++ GIHFS
Sbjct: 309 DRAAKMDIDDLLKLLAAFHEKGIHFS 334
>gi|313215231|emb|CBY42886.1| unnamed protein product [Oikopleura dioica]
Length = 289
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/263 (56%), Positives = 185/263 (70%), Gaps = 8/263 (3%)
Query: 3 GGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
GK K+ G QG G GQHILKNP +V+S+V+KAG+ +D ILE
Sbjct: 1 SGKTSKDSKTVTPGASQGLVFNTSGY------GQHILKNPQVVQSMVEKAGVLPSDTILE 54
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
IGPGTGN+T KLLE K VIA+E+D RMV E+Q+R TP ++L +I D LK +LP+F
Sbjct: 55 IGPGTGNMTVKLLEKCKKVIALEVDERMVAEVQKRVMGTPLKHKLTIINKDALKAELPFF 114
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+ VAN+PY ISSP+TFKLL H+P FR A++MFQKEFA RLVAQPGDK+Y RLSV Q
Sbjct: 115 DLVVANLPYAISSPITFKLLLHRPMFRVAVLMFQKEFADRLVAQPGDKIYSRLSVAVQSL 174
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPV--EWDGFLRICFIRKNKTLSS 240
ARV +LKVGKNNF+PPPKV+S+VVRIEPR+P +N EWD LRICF RKN+ +
Sbjct: 175 ARVDRILKVGKNNFKPPPKVESTVVRIEPRRPPLPINFTQGEWDSMLRICFGRKNRIMKG 234
Query: 241 IFRLKNVLSMLEKNYRTLQALQS 263
F K VL LEKN++T +LQ+
Sbjct: 235 EFTNKKVLETLEKNFQTHCSLQN 257
>gi|164655863|ref|XP_001729060.1| hypothetical protein MGL_3848 [Malassezia globosa CBS 7966]
gi|159102949|gb|EDP41846.1| hypothetical protein MGL_3848 [Malassezia globosa CBS 7966]
Length = 330
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/325 (47%), Positives = 198/325 (60%), Gaps = 48/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNPL+ + IV KA +K TD +LE+GPGTGNLT ++LE K V+ VE+D RM EL
Sbjct: 53 GQHILKNPLVAQGIVDKANLKPTDTVLEVGPGTGNLTVRILEKAKRVVVVEMDPRMAAEL 112
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L+++ GDV KTDLPYFD+ ++N PYQISSPL FKLL H+P FRCAI+M
Sbjct: 113 TKRVQGKPEQRKLEIVIGDVCKTDLPYFDVVISNTPYQISSPLVFKLLSHRPLFRCAILM 172
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMRLVA+PG L+ RLS N QL+A+V H++KV + +FRPPP+VDSSVVRI P P
Sbjct: 173 FQREFAMRLVARPGSPLWGRLSANVQLYAKVDHIMKVARGSFRPPPQVDSSVVRIVPLNP 232
Query: 215 RPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
P + E+DG RI F R+NK L + F + VL M+E N++T A
Sbjct: 233 PPPIKFEEFDGLTRIVFSRRNKVLRACFFGARGVLEMMEANWKTYCA------------- 279
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEE 333
+G ++G+ F DKV +VL E
Sbjct: 280 ----------EHGVSTVGI------------------------SFPDKVDSVLARLGMSE 305
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHF 358
RA+KL E L LLS F+ GIHF
Sbjct: 306 ARAAKLDVDELLTLLSAFHDEGIHF 330
>gi|226480668|emb|CAX73431.1| DIM1 dimethyladenosine transferase 1-like protein [Schistosoma
japonicum]
Length = 313
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 151/338 (44%), Positives = 211/338 (62%), Gaps = 38/338 (11%)
Query: 22 GLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMV 81
+ GGI F +KGQHILKNPL++ ++++K+GIKSTD +LEIG GTGNLT KLLE G+ V
Sbjct: 12 AMKTGGIRFQTTKGQHILKNPLVITTMIEKSGIKSTDSVLEIGSGTGNLTVKLLEKGRKV 71
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK-TDLPYFDICVANIPYQISSPLTFK 140
A E+D R+V ELQ+R Q++P+ ++L+++ GD +K T P FD+CVAN+PY+ISSP +
Sbjct: 72 YAFEIDPRLVSELQKRVQTSPHRSKLEILVGDAVKATSWPKFDLCVANLPYKISSPFIQR 131
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
L+ FR A++MFQKEFA RL A+PGDK+YCRLS + Q H ++ L+K+ +N+FRPPP
Sbjct: 132 LIHAGRGFRAAVVMFQKEFADRLTAKPGDKVYCRLSASAQFHFKIEQLMKISRNSFRPPP 191
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
+VDS+VVRIEPR P P V EWDG LR+ F RKNKT+ + K++ S L K Y
Sbjct: 192 RVDSAVVRIEPRHPLPPVMHSEWDGLLRLVFARKNKTIGANLGGKSIASHLRKIY----- 246
Query: 261 LQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKD 320
+++ L T S+G V ++
Sbjct: 247 METCCTKGLSPTPEVIACESVG--------------------------------VVAMEE 274
Query: 321 KVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
K+ ++LR+ FE+KRA L + +FL LL F K I+F
Sbjct: 275 KISSILRDSGFEKKRARTLDEDDFLRLLLAFRKENIYF 312
>gi|58259713|ref|XP_567269.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Cryptococcus neoformans
var. neoformans JEC21]
gi|134116780|ref|XP_773062.1| hypothetical protein CNBJ3380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255682|gb|EAL18415.1| hypothetical protein CNBJ3380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229319|gb|AAW45752.1| rRNA (adenine-N6,N6-)-dimethyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 325
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/325 (47%), Positives = 202/325 (62%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHIL NPL+ + IV KA +K TDV+LE+GPGTGNLT ++L A + V+AVE+D RM E+
Sbjct: 47 GQHILTNPLVAQGIVDKANLKPTDVVLEVGPGTGNLTVRILPACRKVVAVEMDPRMAAEV 106
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
Q+R P +L++I GD +K DLPYFD+ ++N PYQISSPL FKLL +P RCA++M
Sbjct: 107 QKRVLGKPEQKKLELIVGDFVKADLPYFDVLISNTPYQISSPLVFKLLSQRPIPRCAVLM 166
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA P KL+ RL+ N QL+ARV H++KVGK NFRPPP+V+SSVVRI PR P
Sbjct: 167 FQREFALRLVATPNTKLWGRLAANVQLYARVEHVMKVGKGNFRPPPQVESSVVRIMPRDP 226
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R NKTL + F+ K V+ +LEKNYRT A
Sbjct: 227 PPPVKFEEFDGLNRIIFSRANKTLRAGFKAKGVVELLEKNYRTWCA-------------- 272
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
+Q ++D D ++KV ++L E F +
Sbjct: 273 ------------EQGAIIEDNFD--------------------IREKVESILVETGFADS 300
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LL+ FN GIHF+
Sbjct: 301 RAAKMDVDDLLKLLAAFNVEGIHFA 325
>gi|321258494|ref|XP_003193968.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Cryptococcus gattii
WM276]
gi|317460438|gb|ADV22181.1| rRNA (adenine-N6,N6-)-dimethyltransferase, putative [Cryptococcus
gattii WM276]
Length = 324
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/325 (47%), Positives = 202/325 (62%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHIL NPL+ + IV KA +K TDV+LE+GPGTGNLT ++L A + V+AVE+D RM E+
Sbjct: 46 GQHILTNPLVAQGIVDKANLKPTDVVLEVGPGTGNLTVRILPACRKVVAVEMDPRMAAEV 105
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
Q+R P +L++I GD +K DLPYFD+ ++N PYQISSPL FKLL +P RCA++M
Sbjct: 106 QKRVLGKPEQKKLELIVGDFVKADLPYFDVLISNTPYQISSPLVFKLLSQRPIPRCAVLM 165
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA P KL+ RL+ N QL+ARV H++KVGK NFRPPP+V+SSVVRI PR P
Sbjct: 166 FQREFALRLVATPNTKLWGRLAANVQLYARVEHVMKVGKGNFRPPPQVESSVVRIMPRDP 225
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R NKTL + F+ K V+ +LEKNYRT A
Sbjct: 226 PPPVKFEEFDGLNRIIFSRANKTLRAGFKAKGVVELLEKNYRTWCA-------------- 271
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
+Q ++D D ++KV ++L E F +
Sbjct: 272 ------------EQGAIIEDNFD--------------------MREKVESILVETGFADN 299
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LL+ FN GIHF+
Sbjct: 300 RAAKMDVDDLLKLLAAFNLEGIHFA 324
>gi|405122880|gb|AFR97646.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Cryptococcus neoformans
var. grubii H99]
Length = 325
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/325 (47%), Positives = 202/325 (62%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHIL NPL+ + IV KA +K TDV+LE+GPGTGNLT ++L A + V+AVE+D RM E+
Sbjct: 47 GQHILTNPLVAQGIVDKANLKPTDVVLEVGPGTGNLTVRILPACRKVVAVEMDPRMAAEV 106
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
Q+R P +L++I GD +K DLPYFD+ ++N PYQISSPL FKLL +P RCA++M
Sbjct: 107 QKRVLGKPEQKKLELIVGDFVKADLPYFDVLISNTPYQISSPLVFKLLSQRPIPRCAVLM 166
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA P KL+ RL+ N QL+ARV H++KVGK NFRPPP+V+SSVVRI PR P
Sbjct: 167 FQREFALRLVATPNTKLWGRLAANVQLYARVEHVMKVGKGNFRPPPQVESSVVRIMPRDP 226
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R NKTL + F+ K V+ +LEKNYRT A
Sbjct: 227 PPPVKFEEFDGLNRIIFSRANKTLRAGFKAKGVVELLEKNYRTWCA-------------- 272
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
+Q ++D D ++KV ++L E F +
Sbjct: 273 ------------EQGAIIEDNFD--------------------IREKVESILVETGFADS 300
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LL+ FN GIHF+
Sbjct: 301 RAAKMDVDDLLKLLAAFNVEGIHFA 325
>gi|403414271|emb|CCM00971.1| predicted protein [Fibroporia radiculosa]
Length = 321
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/325 (47%), Positives = 200/325 (61%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP +SIV A ++ TD +LE+GPGTGNLT ++LE K V AVE+D RM EL
Sbjct: 43 GQHILKNPQTAQSIVDTANLRPTDKVLEVGPGTGNLTVRILEKAKHVTAVEMDPRMAAEL 102
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L+++ GD +K LPYFD+C++N PYQISSPL F+LL H+P FR AI+M
Sbjct: 103 TKRVQGKPEQRKLEIMIGDFVKATLPYFDVCISNTPYQISSPLVFRLLSHRPLFRTAILM 162
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA+PG +L+ RLS N QL+A+V ++ V KNNFRPPPKV+SSV+R+ PR P
Sbjct: 163 FQREFALRLVARPGTELWSRLSANVQLYAKVDLVMNVSKNNFRPPPKVESSVIRLVPRDP 222
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG LRI F RKNKT+ + F+ K V MLE N+RT +S+ N I
Sbjct: 223 PPPVEFGEFDGLLRIVFGRKNKTVHANFQAKGVTEMLESNWRTW--------ASVNNVMI 274
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
+DG + K KV VL+E F E
Sbjct: 275 ------------------EDGMN--------------------MKKKVEEVLQETGFSES 296
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
R +K+ + L LLS F+ GIHF+
Sbjct: 297 RPAKMDIDDLLKLLSAFHDVGIHFA 321
>gi|242210765|ref|XP_002471224.1| predicted protein [Postia placenta Mad-698-R]
gi|220729783|gb|EED83652.1| predicted protein [Postia placenta Mad-698-R]
Length = 322
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/337 (45%), Positives = 204/337 (60%), Gaps = 47/337 (13%)
Query: 24 GAGGISFHKSK-GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
GA F+ + GQHILKNP +SIV A ++ TD +LE+GPGTGNLT ++LE K V
Sbjct: 32 GAHNPIFNTERFGQHILKNPQTAQSIVDTANLRPTDKVLEVGPGTGNLTVRILEKAKHVT 91
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
AVE+D RM EL +R Q P +L+++ GD +K LPYFD+C++N PYQISSPL F+LL
Sbjct: 92 AVEMDPRMAAELTKRVQGKPEQRKLEIMIGDFVKATLPYFDVCISNTPYQISSPLIFRLL 151
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H+P FR AI+MFQ+EFAMRLVA+PG +++ RLS N QL+A+V ++ V KNNFRPPPKV
Sbjct: 152 SHRPLFRTAILMFQREFAMRLVARPGSEMWSRLSANVQLYAKVDLVMHVSKNNFRPPPKV 211
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQ 262
+SSV+R+ PR P P V E+DG RI F R+NK + + F+ K V+ MLE N+RT
Sbjct: 212 ESSVIRLVPRDPPPPVEFGEFDGLARIVFGRRNKMIHANFQAKGVMEMLESNWRTW---- 267
Query: 263 SSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKV 322
+S+ N I +DG D K KV
Sbjct: 268 ----ASVNNVMI------------------EDGVD--------------------MKKKV 285
Query: 323 LAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VL E F E RA+K+ + L LLS F+ GIHF+
Sbjct: 286 EEVLEETTFGESRAAKMDIDDLLKLLSAFHDVGIHFA 322
>gi|256085330|ref|XP_002578875.1| dimethyladenosine transferase [Schistosoma mansoni]
gi|350645835|emb|CCD59597.1| dimethyladenosine transferase, putative [Schistosoma mansoni]
Length = 313
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/338 (44%), Positives = 207/338 (61%), Gaps = 38/338 (11%)
Query: 22 GLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMV 81
+ GGI F K+KGQHILKNPL++ ++V+K+GIKSTD +LEIG GTGNLT KLLE G+ V
Sbjct: 12 AIKTGGIRFQKTKGQHILKNPLVINTMVEKSGIKSTDSLLEIGSGTGNLTVKLLEKGRKV 71
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDICVANIPYQISSPLTFK 140
A E+D RMV ELQ+R Q++ + +L+++ GD +K P FD+C+AN+PY+ISSP +
Sbjct: 72 YAFEIDPRMVSELQKRVQTSLHRTKLEILVGDAIKAKSWPKFDLCIANLPYKISSPFIQR 131
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
L+ FR A++M QKEFA RL A+ GDKLYCRLS + Q H ++ L+K+ +N+FRPPP
Sbjct: 132 LISAGHGFRAAVVMLQKEFADRLTAKSGDKLYCRLSASAQFHFKIEQLMKINRNSFRPPP 191
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
+VDS+VVRIEPR P P V EWDG LR+ F RKNKT+ + F K++ S L K Y
Sbjct: 192 RVDSAVVRIEPRHPLPPVMHSEWDGLLRLVFARKNKTIGANFSGKSIASHLRKIY----- 246
Query: 261 LQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKD 320
+++ L T S G VS ++
Sbjct: 247 METCCTKGLSPTPEAIACESTG--------------------------------VSAMEE 274
Query: 321 KVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
K+ +LR+ FE+KRA L + +FL LL F K I+F
Sbjct: 275 KITNILRDSGFEKKRARALDEDDFLRLLLAFKKENINF 312
>gi|393219630|gb|EJD05117.1| rRNA adenine dimethylase [Fomitiporia mediterranea MF3/22]
Length = 320
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 204/325 (62%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNPL+ ++IV+KA ++ TD +LE+GPGTGNLT ++LE K V AVE+D RM EL
Sbjct: 42 GQHILKNPLVAQAIVEKANLRPTDKVLEVGPGTGNLTVRILEKAKHVTAVEMDPRMAAEL 101
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L+++ GD +K DLPYFD+C++N PYQISSPL F+LL H+P R AI+M
Sbjct: 102 TKRVQGKPEQRKLEIMIGDFVKADLPYFDVCISNTPYQISSPLVFRLLSHRPLCRVAILM 161
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA+PG L+ RLS N QL+++V H++KVGKNNFRP P+V+SSVVRI P P
Sbjct: 162 FQREFALRLVARPGTALWSRLSANVQLYSKVDHIMKVGKNNFRPAPQVESSVVRIVPLDP 221
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R+NKT+ + F + V+ MLEKN+RT A Q+ I
Sbjct: 222 PPPVRFEEFDGLNRIIFGRRNKTVHATFMARGVVEMLEKNWRTWCAEQNI---------I 272
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
TD DV + K ++ VL E + E
Sbjct: 273 ATD-----------------------DV--------------DMKSRIEKVLTETGYTEN 295
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LL+ F+ G+HF+
Sbjct: 296 RAAKMDIDDILKLLAAFHDIGVHFA 320
>gi|121711417|ref|XP_001273324.1| dimethyladenosine transferase [Aspergillus clavatus NRRL 1]
gi|119401475|gb|EAW11898.1| dimethyladenosine transferase [Aspergillus clavatus NRRL 1]
Length = 393
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 158/386 (40%), Positives = 220/386 (56%), Gaps = 34/386 (8%)
Query: 8 KEKGKQKSGPYQGQG------LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
K + PYQ G + F+ GQHILKNP + ++IV KA I+ + +L
Sbjct: 8 KRNASGSNSPYQKPGGAPLSKAASAIFKFNTDIGQHILKNPTIADAIVDKANIQPSQTVL 67
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-- 119
E+GPG G LT ++L+ K V+AVELD RM EL + Q+TP +L+++ GD +KTDL
Sbjct: 68 EVGPGPGILTTRILQKAKKVVAVELDPRMAAELTKTVQATPAEKKLQIVLGDFVKTDLSK 127
Query: 120 -PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVN 178
P F IC++N PYQISSPL FKLL + ++M Q+EFA+RL+A+PGD LY RLSVN
Sbjct: 128 LPPFQICISNTPYQISSPLIFKLLSMPNPPKTCVLMVQREFALRLIARPGDSLYSRLSVN 187
Query: 179 TQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
Q +R+SH++KVGKNNFRPPP+V+SSVVR+EP+ RP ++ EWDG LRICF+RKNKTL
Sbjct: 188 AQFFSRISHIMKVGKNNFRPPPQVESSVVRVEPKADRPDISWDEWDGMLRICFVRKNKTL 247
Query: 239 SSIFRLKNVLSMLEKNYRTLQALQSSQNSS-----LGNTEIGT--------------DTP 279
+ F V +++E+N+ T ++ + + L ++ D P
Sbjct: 248 RAGFMGTKVRALIERNWITWVSMHPEKVTHSDIDFLQGKDVPVAQGGDDDMDMGDGEDAP 307
Query: 280 SLGDSNGDQSMGVDDGSDDEMDVEDDD----GDSDVEGEVSE--FKDKVLAVLREGQFEE 333
GD D M + D +D + GD V + + K+ VL +
Sbjct: 308 EAGDDEDDIFMDLGDENDTPVTATKGSLVAIGDQQVPRAMVTKLIQVKIQRVLEQAGLSN 367
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K + FL LL FN GIHFS
Sbjct: 368 ARANKCDENNFLQLLHGFNTEGIHFS 393
>gi|392578160|gb|EIW71288.1| hypothetical protein TREMEDRAFT_67675 [Tremella mesenterica DSM
1558]
Length = 319
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/325 (46%), Positives = 199/325 (61%), Gaps = 49/325 (15%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHIL NPL+ +SI A +K TDV+LE+GPGTGNLT ++L A + V+AVE+D RM E+
Sbjct: 44 GQHILTNPLVAQSI---ANLKPTDVVLEVGPGTGNLTMRILPAVRRVVAVEMDPRMAAEV 100
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
Q+R P +L++I GD +K DLPYFD+C++N PYQISSPL F+LL H+P R A++M
Sbjct: 101 QKRVLGKPEQKKLEMIIGDFVKADLPYFDVCISNTPYQISSPLVFRLLSHRPLIRTAVLM 160
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA P KL+CRLS N QL+ARV HLLKVGK NFRPPP+V+SSVVR+ PR P
Sbjct: 161 FQREFALRLVATPSSKLWCRLSANVQLYARVEHLLKVGKGNFRPPPQVESSVVRLSPRDP 220
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P + E+DG RI F R NK + + F + V MLEKNYRT A
Sbjct: 221 PPPIRFEEFDGLTRIVFSRANKHVRACFGARGVKEMLEKNYRTWCA-------------- 266
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
++E VE D + K+ + VL+ F +
Sbjct: 267 ----------------------ENEKKVESD----------LDMKEMIEKVLQGSGFADN 294
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LL+ FN GIHF+
Sbjct: 295 RAAKMDVDDLLKLLAAFNIQGIHFA 319
>gi|449544193|gb|EMD35167.1| hypothetical protein CERSUDRAFT_116634 [Ceriporiopsis subvermispora
B]
Length = 319
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 199/325 (61%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP +SIV A ++ TD +LE+GPGTGNLT K+LE K V AVE+D RM EL
Sbjct: 41 GQHILKNPQTAQSIVDTANLRPTDKVLEVGPGTGNLTVKILEKAKHVTAVEMDPRMAAEL 100
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L+++ GD +K LPYFD+C++N PYQISSPL F+LL H+P FR A++M
Sbjct: 101 TKRVQGKPEQRKLEIMIGDFVKATLPYFDVCISNTPYQISSPLVFRLLSHRPLFRTAVLM 160
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMRLVAQPG L+ RLS N QL+A+V ++ V KNNFRPPPKV+SSV+R+ PR P
Sbjct: 161 FQREFAMRLVAQPGSNLWSRLSANVQLYAKVDLVMHVSKNNFRPPPKVESSVIRLVPRDP 220
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R+NKT+ + F+ K V MLE N++T +S+ N I
Sbjct: 221 PPPVEFGEFDGLGRILFGRRNKTIHANFQAKGVHEMLESNWKTW--------ASVNNVMI 272
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
+D MD+ K KV VL + + E
Sbjct: 273 ----------------------EDGMDI----------------KKKVEQVLEDTGYTES 294
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LL+ F+ GIHF+
Sbjct: 295 RAAKMEIDDLLKLLAAFHDVGIHFA 319
>gi|392563536|gb|EIW56715.1| rRNA adenine dimethylase [Trametes versicolor FP-101664 SS1]
Length = 322
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 199/325 (61%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP +SIV A ++ +D +LE+GPGTGNLT ++LE K V AVE+D RM EL
Sbjct: 44 GQHILKNPQTAQSIVDTASLRPSDKVLEVGPGTGNLTVRILEKAKHVTAVEMDPRMAAEL 103
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L++I GD +K +LPYFD+C++N PYQISSPL F+LL H+P FR A++M
Sbjct: 104 TKRVQGKPEQRKLEIIIGDFVKAELPYFDVCISNTPYQISSPLVFRLLSHRPIFRVAVLM 163
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA RLVA PG L+ RLS N QL+A+V ++ V KNNFRPPPKV+SSVVR+ PR P
Sbjct: 164 FQREFATRLVATPGSVLWSRLSANVQLYAKVDLVMHVSKNNFRPPPKVESSVVRLVPRDP 223
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R+NK + + F+ K VL MLE N++T
Sbjct: 224 PPPVEFAEFDGLGRIIFGRRNKHIHANFQAKGVLEMLESNWKTW---------------- 267
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
S +++ +EDD FK+KV VL + F E
Sbjct: 268 --------------------ASVNDVMIEDD----------FNFKEKVDQVLLDTGFSES 297
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LLS F+ AGIHF+
Sbjct: 298 RAAKMDINDLLKLLSAFHDAGIHFA 322
>gi|297797749|ref|XP_002866759.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312594|gb|EFH43018.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 376
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 212/335 (63%), Gaps = 27/335 (8%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ KSKGQH+L N ++++IV+ + ++ TD +LEIGPGTGNLT KLLEA + V+AVEL
Sbjct: 53 GLFLCKSKGQHLLTNTRILDAIVRCSDVRPTDTVLEIGPGTGNLTMKLLEAAQDVVAVEL 112
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV L++R ++++L +IQ DVLKTD P FD+ VANIPY ISSPL KL++
Sbjct: 113 DKRMVEILRKRVSDHGFAHKLTIIQKDVLKTDFPQFDLVVANIPYNISSPLVAKLVYGSN 172
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FR A ++ QKEF+ RL+A PGD + RL+VN +L A V ++ V K F PPPKVDSSV
Sbjct: 173 TFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVKFVMDVSKREFVPPPKVDSSV 232
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
V I P++ P VN EW F R CF +KNKTL S+FR K K L +L + +N
Sbjct: 233 VMITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQK-------KKVMELLSLSAGRN 285
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSD---VEGEVSEFKDKVL 323
S ++G + GDS+ D ED DG D ++ + S FK++V+
Sbjct: 286 GS----KVGVMNQTCGDSDSDVE-------------EDGDGKDDLLCLDTDASMFKERVI 328
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+LR FEEKR SKL+ E L++LSLFN+AG+ F
Sbjct: 329 GILRTNGFEEKRPSKLSHSELLHVLSLFNRAGVFF 363
>gi|393243729|gb|EJD51243.1| rRNA adenine dimethylase [Auricularia delicata TFB-10046 SS5]
Length = 322
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 207/354 (58%), Gaps = 48/354 (13%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSK-GQHILKNPLLVESIVQKAGIKSTDVILEIGPG 66
K +KS G GA F+ + GQHILKNP + + IV KA ++ TD +LE+GPG
Sbjct: 15 KSAKPEKSNANTGSSTGAHNPIFNTERFGQHILKNPQIAQDIVDKANLRPTDKVLEVGPG 74
Query: 67 TGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICV 126
TGNLT ++LE K A+E+D RM EL +R Q TP +L+++ GD K DLPYFD+C+
Sbjct: 75 TGNLTVRILEKAKQCTAIEMDPRMAAELTKRVQGTPEQRKLEIMIGDFAKADLPYFDVCI 134
Query: 127 ANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVS 186
+N PYQISS + F+LL H+P FR AI+MFQ+EFA RLVA+PG L+ RLS N QL+A+V
Sbjct: 135 SNTPYQISSVIVFRLLSHRPLFRTAILMFQREFAQRLVARPGSALWSRLSANVQLYAKVD 194
Query: 187 HLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLK 245
H+ +V +NNFRPPP+VDSSVVRI P P P V E+DG RI F R+NKT+ SS F K
Sbjct: 195 HIRQVDRNNFRPPPQVDSSVVRIVPLDPPPPVRFEEFDGLTRILFSRRNKTVRSSFFGAK 254
Query: 246 NVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDD 305
V+ MLEKNYRT S+ ++ V DG D
Sbjct: 255 GVVEMLEKNYRTW----CSETDAI----------------------VPDGLD-------- 280
Query: 306 DGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
K + + E + E+RA+K+ + L LL+ F+ GIHFS
Sbjct: 281 ------------MKKLIDEIFEETGYAEERAAKMDINDLLKLLTAFHDRGIHFS 322
>gi|170097177|ref|XP_001879808.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645211|gb|EDR09459.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 290
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 199/325 (61%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP + IV A +K TD ++E+GPGTGNLT K+LE K V AVE+D RM E+
Sbjct: 12 GQHILKNPATAQKIVDAANLKPTDKVMEVGPGTGNLTVKILEKAKHVTAVEMDPRMAAEV 71
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP +L+VI GD +K D+PYF++C++N PYQISSPL F+LL H+P FR AI+M
Sbjct: 72 IKRVQGTPEQRKLEVIIGDFVKVDMPYFEVCISNTPYQISSPLVFRLLSHRPLFRVAILM 131
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMRLVA+PG L+ RLS N QL+A+V +++ V +N+FRPPP+V+SSV+R+ P P
Sbjct: 132 FQREFAMRLVARPGTALWSRLSANVQLYAKVDNIINVSRNDFRPPPQVESSVIRLVPIDP 191
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R NKT+ F+ K V+ MLE+N RT A+
Sbjct: 192 PPPVKFEEFDGLNRIIFSRPNKTVRGNFQAKGVMKMLEQNRRTWLAM------------- 238
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
Q M VDD + ++ DK VL +G + E
Sbjct: 239 -------------QDMPVDDTT-----------------SINTLLDK---VLEDGGYTES 265
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RASK+ + L LLS F+ GIHFS
Sbjct: 266 RASKMDVDDLLRLLSAFHDVGIHFS 290
>gi|302682452|ref|XP_003030907.1| hypothetical protein SCHCODRAFT_56433 [Schizophyllum commune H4-8]
gi|300104599|gb|EFI96004.1| hypothetical protein SCHCODRAFT_56433 [Schizophyllum commune H4-8]
Length = 329
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 152/339 (44%), Positives = 204/339 (60%), Gaps = 39/339 (11%)
Query: 22 GLGAGGISFHKSK-GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKM 80
G GA F + GQHIL NPL+ + IV KA +K TD +LE+GPGTGNLT ++L+ K
Sbjct: 29 GGGARNPIFKTERFGQHILNNPLVAQGIVDKANLKPTDNVLEVGPGTGNLTVRILDKAKH 88
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V AVE+D RM EL +R Q P +L +I GD +K DLPYFD+C++N PYQISSPL F+
Sbjct: 89 VTAVEMDPRMAAELTKRVQGKPEQRKLDIIIGDFVKADLPYFDVCISNTPYQISSPLVFR 148
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL H+P R I+MFQ+EFA+RLVA+PG + + RLS N QL+A+V H++KV K+ FRPPP
Sbjct: 149 LLSHRPLPRVCILMFQREFALRLVARPGTEFWSRLSANVQLYAKVDHVMKVAKSCFRPPP 208
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
V+SSVVRI P P P V E+DG RI F R NK + + F+ + VL MLE N++T
Sbjct: 209 MVESSVVRIVPLDPPPPVRFEEFDGLTRIIFARPNKVVHANFQARGVLEMLEANWKTW-- 266
Query: 261 LQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKD 320
SQN+ G D VE++ + FK
Sbjct: 267 --CSQNNKAG------------------------WLTDLQIVENN----------TSFKS 290
Query: 321 KVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
KV +LR+ + RA+K+ + + L LL+ F+ GIHF+
Sbjct: 291 KVEQILRDTSMLDARAAKMDKDDILKLLAAFHDEGIHFA 329
>gi|169765912|ref|XP_001817427.1| dimethyladenosine transferase [Aspergillus oryzae RIB40]
gi|238482523|ref|XP_002372500.1| dimethyladenosine transferase [Aspergillus flavus NRRL3357]
gi|83765282|dbj|BAE55425.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700550|gb|EED56888.1| dimethyladenosine transferase [Aspergillus flavus NRRL3357]
gi|391868353|gb|EIT77571.1| ribosomal RNA adenine dimethylase [Aspergillus oryzae 3.042]
Length = 392
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 225/398 (56%), Gaps = 49/398 (12%)
Query: 4 GKI-RKEKGKQKSGPYQGQGLGAGG------ISFHKSKGQHILKNPLLVESIVQKAGIKS 56
GK+ R + + +GPYQ G G F+ GQHILKN + ++IV KA I+
Sbjct: 2 GKVARTKHSRGANGPYQKPDQGPLGKATSAIFKFNTDLGQHILKNGAIADAIVDKANIQQ 61
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
+LE+GPG G LT ++L K V+AVE+D RM EL + Q TP +L+++ GD +K
Sbjct: 62 GQTVLEVGPGPGVLTNRILAKAKKVVAVEVDPRMAAELTKNVQGTPAEKKLQIVLGDFVK 121
Query: 117 TDL---PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYC 173
TDL P F IC++N PYQISSPL FKLL + ++M Q+EFA+RLVA+PGD LY
Sbjct: 122 TDLSQLPPFQICISNTPYQISSPLIFKLLSMPNPPKMCVLMVQREFALRLVARPGDSLYS 181
Query: 174 RLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIR 233
RLSVN Q +RV H++KVG+NNFRPPP+V+SSVVR+EP+ RP ++ EWDG LRICF+R
Sbjct: 182 RLSVNVQFFSRVQHIMKVGRNNFRPPPQVESSVVRVEPKSDRPAISWDEWDGMLRICFVR 241
Query: 234 KNKTLSSIFRLKNVLSMLEKNYRTLQAL------QSSQNSSLGNTEIGTDTPSLGDSNGD 287
KNKTL + F +M+E+N+ T + Q+ + LGN E D+N
Sbjct: 242 KNKTLRAGFMGNKTRAMIERNWITFATMYPEKVTQADIDFMLGNGEPEPMEDVEMDTN-- 299
Query: 288 QSMGVDDGSDDEMDVEDDD---GDSDVE-----------------GEVSE------FKDK 321
+D DD ++++DD GD E +VS + K
Sbjct: 300 -----NDADDDVPEMDEDDILMGDMGFEKKNVPEIPKGALLTIGNNKVSRVMVTKLIQVK 354
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ +L + RA K + +FL LL NK GIHFS
Sbjct: 355 LQRILDRTELANARAQKCDENDFLRLLHACNKEGIHFS 392
>gi|331229364|ref|XP_003327348.1| dimethyladenosine transferase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309306338|gb|EFP82929.1| dimethyladenosine transferase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 341
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 203/330 (61%), Gaps = 45/330 (13%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLE 93
GQHILKNPL+ ++IV KA +K+TD +LE+GPGTGNLT K+LE K + VE+D RM E
Sbjct: 52 GQHILKNPLVAQTIVDKANLKTTDKVLEVGPGTGNLTVKILEKNCKSLTVVEMDPRMAFE 111
Query: 94 LQRRFQSTP---YSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRC 150
L +RFQ+ + +L++I GD LKT+LPYFD+C++N PYQISSPL FKLL H+P FR
Sbjct: 112 LSKRFQNAKDLNFKRKLEIIVGDFLKTELPYFDVCISNTPYQISSPLVFKLLEHRPLFRV 171
Query: 151 AIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIE 210
AI+MFQKEF +RL A+PG KL+ RLSVN QL+++V+HL+ VGK NFRPPP V+S VV+IE
Sbjct: 172 AILMFQKEFGLRLSARPGSKLWSRLSVNVQLYSKVTHLMNVGKANFRPPPLVESCVVKIE 231
Query: 211 PRKPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
P P P + E+DG RICF R+NKT+ +S F + L+MLE N+ T ++ Q S +
Sbjct: 232 PLNPPPNIAFNEFDGLTRICFNRRNKTVRASFFASNSTLNMLEANWNTWKSQQQSIVTEQ 291
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
E S + +S G D +MDV+D
Sbjct: 292 EEEEQNQTFTSKLEKILQES-GYSDSRSAKMDVDD------------------------- 325
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
FL LL+ F+K GIHF+
Sbjct: 326 --------------FLSLLACFHKHGIHFA 341
>gi|409042841|gb|EKM52324.1| hypothetical protein PHACADRAFT_211596 [Phanerochaete carnosa
HHB-10118-sp]
Length = 320
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 200/325 (61%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP ++IV+KA ++ TD +LE+GPGTGNLT ++LE K V AVE+D RM EL
Sbjct: 42 GQHILKNPQTADTIVEKANLRPTDKVLEVGPGTGNLTVRILEKAKHVTAVEMDPRMAAEL 101
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L+++ GD +K LPYFD+C++N PYQISSPL F+LL H+P FR AI+M
Sbjct: 102 TKRVQGKPEQKKLEIMIGDFVKATLPYFDVCISNTPYQISSPLIFRLLSHRPLFRIAILM 161
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMRLVA+PG + + RLS N QL+++V ++ VGKNNFRPPPKV+SSV+R+ P P
Sbjct: 162 FQREFAMRLVARPGTEPWSRLSANVQLYSKVDLVMHVGKNNFRPPPKVESSVIRLVPLDP 221
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R+NK + + F K V+ MLE N+RT
Sbjct: 222 PPPVAFEEFDGLGRIIFSRRNKIIHANFMAKGVIEMLESNWRTW---------------- 265
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
S + + +EDD + K KV VL E F E+
Sbjct: 266 --------------------ASTNNVTIEDD----------FDIKKKVEGVLDESGFTEQ 295
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ E L LLS F+ AGIHF+
Sbjct: 296 RAAKMGVDELLKLLSAFHDAGIHFA 320
>gi|358054954|dbj|GAA99021.1| hypothetical protein E5Q_05710 [Mixia osmundae IAM 14324]
Length = 511
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 153/325 (47%), Positives = 202/325 (62%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNPL+ + IV KA ++STD +LE+GPGTGNLT ++L+ K +AVE+D RM EL
Sbjct: 233 GQHILKNPLVAQGIVDKASLRSTDSVLEVGPGTGNLTVRILQVCKHCLAVEMDPRMAAEL 292
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L ++ GD +KT+LPYFD+C++N PYQISSPL FKLL +P FR AI+M
Sbjct: 293 TKRVQGKPEQRKLDILVGDFVKTELPYFDVCISNTPYQISSPLVFKLLAQRPLFRVAILM 352
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMRLVA+PGD L+ RLS N QL A+V H++KVGKNNFRPPPKV+SSVVRI P P
Sbjct: 353 FQREFAMRLVAKPGDDLWNRLSANVQLFAKVDHIMKVGKNNFRPPPKVESSVVRIVPIDP 412
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P + E+DG RI F R+NK + + F+ V MLE N++ A S QN L N
Sbjct: 413 PPPIRFEEFDGLTRIIFARRNKIVRATFQASGVKEMLESNHK---AWYSQQNKRLPN--- 466
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
D D+ E+ E +L E F +
Sbjct: 467 ---------------------------------DFDI-AELLE------TILSESGFAQT 486
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
R +K+ ++FL LL+ F++ GIHF+
Sbjct: 487 RGAKMGVEDFLSLLADFHRHGIHFA 511
>gi|67525711|ref|XP_660917.1| hypothetical protein AN3313.2 [Aspergillus nidulans FGSC A4]
gi|40744101|gb|EAA63281.1| hypothetical protein AN3313.2 [Aspergillus nidulans FGSC A4]
gi|259485718|tpe|CBF82976.1| TPA: dimethyladenosine transferase (AFU_orthologue; AFUA_7G04860)
[Aspergillus nidulans FGSC A4]
Length = 403
Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 226/398 (56%), Gaps = 45/398 (11%)
Query: 7 RKEKGKQKSGPYQ----GQGLGAGG------ISFHKSKGQHILKNPLLVESIVQKAGIKS 56
RK+ + + PYQ G G A F+ GQHILKN + ++IV KA ++
Sbjct: 6 RKKSARASASPYQKPSKGDGRSAAAKAGSAIFKFNTDLGQHILKNGAIADNIVDKANVQP 65
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
+ +LE+GPG G LT ++LE K V+AVE D RM EL +R Q+TP +L+++ GD +K
Sbjct: 66 SQTVLEVGPGPGILTTRILEKAKKVVAVEFDPRMAAELTKRVQATPMEKKLQIVLGDFIK 125
Query: 117 TDL---PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYC 173
TDL P F +C++N PYQISSPL FKLL + ++M Q+EFA+RL+A+PGD LY
Sbjct: 126 TDLSKLPPFQVCISNTPYQISSPLIFKLLSMPNPPKMCVLMVQREFALRLLARPGDALYS 185
Query: 174 RLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIR 233
RLSVN Q ++VSH++KVG+NNFRPPP+V+SSVVRIEP+ +P+++ EWDG LRICF+R
Sbjct: 186 RLSVNVQFFSKVSHIMKVGRNNFRPPPQVESSVVRIEPKLGKPEISWDEWDGMLRICFVR 245
Query: 234 KNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTP----SLGDSNGDQS 289
KNKTL + F + M+E+N+ T A+ + S + TP +S D
Sbjct: 246 KNKTLRAGFMATKIRQMIERNWITWAAMHPEKVSQGDVDLLSGKTPFPEGKFANSKDDGD 305
Query: 290 MGVDDGSDDEMDVEDDDGD---SDVEG-----EVSE--------------------FKDK 321
+ +D + EDD GD + VEG V++ + K
Sbjct: 306 VDMDVDDAGPVVDEDDVGDIFMNGVEGGEKGAAVAQSGPVITVAGQQVPRTSVTRLIQFK 365
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ +L RA+K + +FL LL N GIHFS
Sbjct: 366 IERILDTAGLANHRANKCDENDFLRLLHACNTEGIHFS 403
>gi|358255919|dbj|GAA57529.1| 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
[Clonorchis sinensis]
Length = 314
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/234 (55%), Positives = 174/234 (74%), Gaps = 1/234 (0%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GGI F K KGQHILKNPL++ ++++KAG+K+TD +LEIG GTGNLT KLLE K V
Sbjct: 14 LKTGGIRFQKQKGQHILKNPLIINTMIEKAGVKNTDTVLEIGAGTGNLTVKLLERAKKVC 73
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK-TDLPYFDICVANIPYQISSPLTFKL 141
A E+D RMV ELQ+R Q++ ++L+++ GD +K + P FD+CV+N+PYQISSP +L
Sbjct: 74 AFEIDPRMVAELQKRLQTSSNRSKLEILVGDAIKASTWPKFDLCVSNLPYQISSPFIQRL 133
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
+ +R A++M QKEFA RL+AQPGDKLYCRLS Q H +V+ L+++ +N+FRPPP+
Sbjct: 134 MKAGRGYRAAVVMVQKEFADRLLAQPGDKLYCRLSAAVQFHCKVALLMRISRNSFRPPPR 193
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNY 255
VDS+VVR+EPR P P V EWDG LR+ F RKNKT+ + F K V ++L K+Y
Sbjct: 194 VDSAVVRVEPRHPLPPVTFSEWDGLLRLVFARKNKTVGANFSGKAVAALLRKHY 247
>gi|296420592|ref|XP_002839853.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636059|emb|CAZ84044.1| unnamed protein product [Tuber melanosporum]
Length = 294
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/325 (45%), Positives = 194/325 (59%), Gaps = 72/325 (22%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP + ++IV KAG+K +DV+LE+GPGTGNLT K+LE + VIAVE+D RM EL
Sbjct: 42 GQHILKNPGVAQAIVNKAGLKQSDVVLEVGPGTGNLTVKILEQARKVIAVEMDPRMAAEL 101
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P R++++ GDV+KT+LPYFD+C++N PYQISSPL FKLL PA R I+M
Sbjct: 102 TKRVQGKPEQTRVEILLGDVIKTELPYFDVCISNTPYQISSPLVFKLLALSPAPRTCILM 161
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFAMR+VAQPGD LYCRLS V+SSV+RIEP+ P
Sbjct: 162 FQREFAMRVVAQPGDTLYCRLS-------------------------VESSVIRIEPKNP 196
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
RP ++ EWDG LRI F+RKNKT+++ F+ V+++LE+NYRT A
Sbjct: 197 RPPISYDEWDGLLRIVFVRKNKTIAAGFKSSAVMALLERNYRTWCA-------------- 242
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
+ + +ED+ + K V +VL E + EK
Sbjct: 243 ----------------------TNNVKLEDE-----------KVKGLVDSVLAETELREK 269
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA K + +FL LL FN+ GIHFS
Sbjct: 270 RAGKCDEADFLKLLYAFNQQGIHFS 294
>gi|443923423|gb|ELU42667.1| rRNA (adenine-N6,N6-)-dimethyltransferase [Rhizoctonia solani AG-1
IA]
Length = 498
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/258 (50%), Positives = 178/258 (68%), Gaps = 5/258 (1%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESI-----VQKAGIKSTDVILE 62
K Q + G G + + GQHILKNPL+ + I + +A +K TD +LE
Sbjct: 18 KASASQSTSEATGSSSGRNPLFNTERFGQHILKNPLVAQGIYLYLHMTQANLKPTDRVLE 77
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPGTGNLT ++LE K AVE+D RM EL +R Q TP ++L ++ GD +K +LPYF
Sbjct: 78 VGPGTGNLTVRILERAKHCTAVEMDPRMAAELTKRVQGTPEQHKLNIMIGDFVKAELPYF 137
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+C++N PYQISSP+ F+LL H+P FR AI+MFQ+EFA+RLVA+PGD L+CRLS N Q++
Sbjct: 138 DVCISNTPYQISSPIVFRLLSHRPLFRVAILMFQREFALRLVARPGDALWCRLSANVQMY 197
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
A+V H++KVGKNNFRP P+V+SSVVRI P P P + E+DG RI F R+NKT + F
Sbjct: 198 AKVDHIMKVGKNNFRPAPQVESSVVRIVPIDPPPPLRFEEFDGLTRILFSRRNKTAHANF 257
Query: 243 RLKNVLSMLEKNYRTLQA 260
K V+ +L++NY+T A
Sbjct: 258 LAKGVMELLDRNYKTWCA 275
>gi|118388069|ref|XP_001027135.1| dimethyladenosine transferase family protein [Tetrahymena
thermophila]
gi|89308905|gb|EAS06893.1| dimethyladenosine transferase family protein [Tetrahymena
thermophila SB210]
Length = 345
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 127/235 (54%), Positives = 174/235 (74%), Gaps = 18/235 (7%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
+HIL NP ++ SIV+K+ I+ TD++LEIGPGTGNLT LLE K VIAVE+D RMV EL
Sbjct: 14 NKHILVNPQMLHSIVEKSAIRPTDIVLEIGPGTGNLTALLLEKAKKVIAVEIDPRMVAEL 73
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+RF+ + ++++ ++IQGD + T+ P+FD+CVAN PYQISSPL FKLL H+P FR A++M
Sbjct: 74 NKRFKYSQHAHKFELIQGDAISTEFPFFDVCVANTPYQISSPLVFKLLSHRPLFRHAVLM 133
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ LSVN QL ++ HL+KVGKNNF+PPPKV+SSV+RIEP+ P
Sbjct: 134 FQ------------------LSVNVQLLSKCDHLIKVGKNNFKPPPKVESSVIRIEPKNP 175
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
P +N +EWDG LR+CF+RKNK LS+IF+ K+VL +LEKN+ T Q +++ + ++
Sbjct: 176 APVLNYIEWDGLLRVCFMRKNKQLSAIFKNKSVLQVLEKNFETYQKIKAIEQGAV 230
>gi|402220127|gb|EJU00199.1| rRNA adenine dimethylase [Dacryopinax sp. DJM-731 SS1]
Length = 318
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/342 (45%), Positives = 206/342 (60%), Gaps = 47/342 (13%)
Query: 19 QGQGLGAGGISFHKSK-GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA 77
+G+ +G F+ + GQHILKNP + IV KA ++ TD +LE+GPGTGNLT +LE
Sbjct: 23 KGEAVGNRNPLFNTERFGQHILKNPGVARDIVDKANLRPTDRVLEVGPGTGNLTVLILEK 82
Query: 78 GKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPL 137
K V A+E+D RM EL +R Q TP +L ++ GD +K DLPYFD+C++N PYQISSP+
Sbjct: 83 AKQVTAIEMDPRMAAELSKRVQGTPEQRKLNIMIGDFVKADLPYFDVCISNTPYQISSPI 142
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F+LL H+P FR AI+MFQ+EFAMRLVAQPG L+ RLS N QL+A V H+ KV K NFR
Sbjct: 143 IFRLLSHRPLFRVAILMFQREFAMRLVAQPGSSLWSRLSANVQLYAAVDHIRKVDKANFR 202
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRT 257
P P+VDSSVVR+ P+ P P V E+DG RI F R+NKT+ + F+ K V MLE+N++T
Sbjct: 203 PAPEVDSSVVRVVPKDPPPPVKFEEFDGLTRILFTRRNKTVHANFQAKGVYKMLEQNWKT 262
Query: 258 LQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSE 317
A + V+DG D
Sbjct: 263 WCA--------------------------ETGQMVEDGVD-------------------- 276
Query: 318 FKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
FK +V ++L E + E RA+K+T + L LLS F+ G+HF+
Sbjct: 277 FKQRVDSLLEETGYAENRAAKMTVDDLLKLLSAFHDIGVHFA 318
>gi|302509638|ref|XP_003016779.1| hypothetical protein ARB_05072 [Arthroderma benhamiae CBS 112371]
gi|291180349|gb|EFE36134.1| hypothetical protein ARB_05072 [Arthroderma benhamiae CBS 112371]
Length = 364
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 219/384 (57%), Gaps = 58/384 (15%)
Query: 7 RKEKGKQKSGPYQ---GQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
++ Q S PY + A I + GQH+LKNP + ++IV KA +K +D +LE
Sbjct: 8 KRNNAAQASSPYAQAVAKTKAAHNIFRMNTDIGQHVLKNPGVAQAIVDKADLKQSDTVLE 67
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPG+GNLT K+LE K VIAVELD RM EL +R Q P RL+V+ GDV+KT
Sbjct: 68 VGPGSGNLTVKILEKAKKVIAVELDPRMAAELTKRVQGKPEQKRLEVLLGDVMKT----- 122
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
+ISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN Q+
Sbjct: 123 ---------EISSPLTFKLLATNPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMW 173
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSI 241
A++ H++KVGKNNF+PPP V+SSVVRI P+ PRP ++ EWDG LRI F+RKNKTL SS
Sbjct: 174 AKIDHIMKVGKNNFKPPPAVESSVVRIVPKVPRPDISYDEWDGLLRIAFVRKNKTLRSSF 233
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDG------ 295
+V+SMLE NY T A QN N I +D +GDQ M ++
Sbjct: 234 LGTTSVVSMLEANYCTWCA----QN----NIPIDSDL-----LDGDQQMITEEEDDQGEE 280
Query: 296 ------------------SDDEMDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKR 335
+++ G+V+ ++K+ VL + + +KR
Sbjct: 281 EVDEIMDVDDEDDVPDFFKTEKVQTASSKPGPTKRGKVTNLVREKIRQVLEDDTKLADKR 340
Query: 336 ASKLTQQEFLYLLSLFNKAGIHFS 359
A + EFL LL FN+ GIHFS
Sbjct: 341 ARMCDEGEFLKLLWAFNQKGIHFS 364
>gi|156084308|ref|XP_001609637.1| dimethyladenosine transferase protein [Babesia bovis T2Bo]
gi|154796889|gb|EDO06069.1| dimethyladenosine transferase protein, putative [Babesia bovis]
Length = 366
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 203/339 (59%), Gaps = 48/339 (14%)
Query: 21 QGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKM 80
Q + +GG++F+K GQH+LKNP +++ I+ A I+S+D +LEIGPGTGNLT +L+ +
Sbjct: 40 QKVTSGGMTFNKKFGQHMLKNPGILDKIILAAEIRSSDTVLEIGPGTGNLTIRLVPLARK 99
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
VIA+++D+RMV E+++R S YSN L VI+GD L+ P FD+C AN+PYQISSP FK
Sbjct: 100 VIAIDIDNRMVGEVKKRCLSMGYSN-LDVIEGDALRITYPKFDVCTANLPYQISSPFVFK 158
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL H+P FRCA++MFQKEFA RL+A + Y RL++NT+L V+ + KV +F PPP
Sbjct: 159 LLSHRPLFRCAVLMFQKEFAERLLASTNEAKYGRLAINTRLFCTVTRVCKVAPGSFNPPP 218
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
KVDS +V+I PR+ ++ VEWDG +R+CF RK +TL S+F+ + +LS+LE NY+
Sbjct: 219 KVDSMIVKIVPREQPLVIDFVEWDGMIRVCFTRKRRTLRSLFKKQAILSVLEGNYKNWCT 278
Query: 261 LQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKD 320
+ NG E FKD
Sbjct: 279 I-----------------------NGKAP------------------------EPMPFKD 291
Query: 321 KVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ +L E +R+ ++ EFL L+ FN AGIHF+
Sbjct: 292 YCMGILEESGLSNRRSITVSIAEFLELMVKFNNAGIHFA 330
>gi|302654957|ref|XP_003019274.1| hypothetical protein TRV_06678 [Trichophyton verrucosum HKI 0517]
gi|291182988|gb|EFE38629.1| hypothetical protein TRV_06678 [Trichophyton verrucosum HKI 0517]
Length = 364
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 168/385 (43%), Positives = 221/385 (57%), Gaps = 60/385 (15%)
Query: 7 RKEKGKQKSGPYQ---GQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
++ Q S PY + A I + GQH+LKNP + ++IV KA +K +D +LE
Sbjct: 8 KRNNAAQASSPYAQAVAKTKAAHNIFRMNTDIGQHVLKNPGVAQAIVDKADLKQSDTVLE 67
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
+GPG+GNLT K+LE K VIAVELD RM EL +R Q P RL+V+ GDV+KT
Sbjct: 68 VGPGSGNLTVKILEKAKKVIAVELDPRMAAELTKRVQGKPEQKRLEVLLGDVMKT----- 122
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
+ISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN Q+
Sbjct: 123 ---------EISSPLTFKLLATNPAPRVCILMFQREFAMRLFAKPGDKLYSRLSVNAQMW 173
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSI 241
A++ H++KVGKNNF+PPP V+SSVVRI P+ PRP ++ EWDG LRI F+RKNKTL SS
Sbjct: 174 AKIDHIMKVGKNNFKPPPAVESSVVRIVPKVPRPDISYDEWDGLLRIAFVRKNKTLRSSF 233
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDG------ 295
+V+SMLE NY T A QN+ I D+ L +GDQ M ++
Sbjct: 234 LGTTSVVSMLEANYCTWCA----QNN------IPVDSDLL---DGDQQMITEEDDDQGEE 280
Query: 296 -------------------SDDEMDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEK 334
++ G + G+V+ ++K+ VL + + +K
Sbjct: 281 EVDEIMDVDDEDDVPDFFKTEKAQTASSKPGPTK-RGKVTNLVREKIRQVLEDDTKLADK 339
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA + EFL LL FN+ GIHFS
Sbjct: 340 RARMCDEGEFLKLLWAFNQKGIHFS 364
>gi|209877254|ref|XP_002140069.1| dimethyladenosine transferase protein [Cryptosporidium muris RN66]
gi|209555675|gb|EEA05720.1| dimethyladenosine transferase protein, putative [Cryptosporidium
muris RN66]
Length = 361
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 144/332 (43%), Positives = 199/332 (59%), Gaps = 47/332 (14%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
+ K KGQH+LKNP +++ IV+ + IK TD++LEIGPGTGNLT +LL + VIA ++
Sbjct: 49 NVMLDKKKGQHLLKNPGILDKIVEASDIKPTDIVLEIGPGTGNLTMRLLPLARKVIAFDI 108
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV E+++R + Y+N L+V +GD L++DL FDIC AN+PYQISSP F++L H+P
Sbjct: 109 DPRMVAEVKKRSMNAGYNN-LEVKEGDALRSDLGKFDICTANLPYQISSPFVFRILSHKP 167
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQ+EFA+RL+A+PGDK YCRL++NT+L +V + KV +F PPPKV+S V
Sbjct: 168 TFRCAVLMFQEEFALRLLAEPGDKHYCRLTLNTKLLCKVIRVCKVLPGSFNPPPKVNSMV 227
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
V+ P+ VN EWDG +RICF+RK KT+ + F+ + L+MLE NY+T
Sbjct: 228 VKFIPKTCPIPVNFREWDGLMRICFLRKKKTIRANFKGSSTLTMLENNYKTW-------- 279
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
SL N + P FK+ V +L
Sbjct: 280 CSLNNQVPQNNVP--------------------------------------FKEFVFKIL 301
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
E KRA ++ E+ LL FNK GIHF
Sbjct: 302 ENTGLESKRAFNISIDEYFKLLLEFNKNGIHF 333
>gi|312085450|ref|XP_003144684.1| hypothetical protein LOAG_09107 [Loa loa]
Length = 276
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/312 (44%), Positives = 188/312 (60%), Gaps = 46/312 (14%)
Query: 47 SIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNR 106
S + ++ IK+TD + E+G GTGNLT L+E K VIA E+D RM+ EL++R T + +
Sbjct: 10 SALLQSAIKATDTVFEVGSGTGNLTVVLMEKAKKVIACEIDRRMIAELKKRVIGTSHQQK 69
Query: 107 LKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQ 166
L++ QGDV+K + P+FD+C+AN+PYQISSP F++L +P R A++MFQKEFA RL+A+
Sbjct: 70 LEMKQGDVIKMEWPFFDVCIANLPYQISSPFVFRMLLQRPLPRYAVLMFQKEFADRLLAK 129
Query: 167 PGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGF 226
PG KLYCRLSVN Q A+V HL+KV + FRPPPKVDS+VVRI PR P PQ+N EWD
Sbjct: 130 PGSKLYCRLSVNVQFLAQVEHLMKVKRTEFRPPPKVDSAVVRIAPRNPPPQINFQEWDNL 189
Query: 227 LRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNG 286
LRI F+RKNKTL S+F+ V LEK+YR L ++++ + S N
Sbjct: 190 LRIVFLRKNKTLLSLFKNNQVCDSLEKSYRALYSIKNKEVESQFN--------------- 234
Query: 287 DQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLY 346
+DKV ++ F KRA ++ ++FL
Sbjct: 235 -------------------------------IRDKVEHIITGSGFASKRARQMDTEDFLS 263
Query: 347 LLSLFNKAGIHF 358
LL FNK IHF
Sbjct: 264 LLLAFNKEDIHF 275
>gi|389743290|gb|EIM84475.1| rRNA adenine dimethylase [Stereum hirsutum FP-91666 SS1]
Length = 325
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/325 (45%), Positives = 200/325 (61%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP + + IV KA ++ TD +LE+GPGTGNLT ++LE K AVE+D RM EL
Sbjct: 47 GQHILKNPSIAQDIVDKANLRPTDKVLEVGPGTGNLTVRILEKAKHCTAVEMDPRMAAEL 106
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L+++ GD +K LPYFD+C++N PYQISSPL F+LL H+P FRCAI+M
Sbjct: 107 TKRVQGKPEQRKLEIMIGDFVKATLPYFDVCISNTPYQISSPLIFRLLSHRPLFRCAILM 166
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA+P L+ RLS N QL+A+V ++ VGKNNFRPPP V+SSVVR+ P P
Sbjct: 167 FQREFALRLVARPASTLWSRLSANVQLYAKVDLIMNVGKNNFRPPPNVESSVVRVVPLDP 226
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R+NKT+ + F K V+ MLEKN++T A
Sbjct: 227 PPPVRFEEFDGLGRIVFSRRNKTVHASFGAKGVVEMLEKNWKTWCA-------------- 272
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
++E ++DD K++V +L E + ++
Sbjct: 273 ----------------------ENEKMIDDD----------MSMKERVEGILTESGYHDQ 300
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LLS F+ AGIHF+
Sbjct: 301 RAAKMDVNDLLKLLSAFHDAGIHFA 325
>gi|388583183|gb|EIM23485.1| rRNA adenine dimethylase [Wallemia sebi CBS 633.66]
Length = 318
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 202/354 (57%), Gaps = 50/354 (14%)
Query: 9 EKGKQKSGPYQGQGLGAGGIS---FHKSK-GQHILKNPLLVESIVQKAGIKSTDVILEIG 64
EK + P +GG S F+ + GQHILKNPL+ ++IV KA +++TD + EIG
Sbjct: 10 EKFSRSHQPAAKSDSNSGGTSNPLFNTDRFGQHILKNPLVAQAIVDKASLRATDKVFEIG 69
Query: 65 PGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI 124
PGTGNLT ++LE K +E+D RM EL +RFQ P RL+++ GD +K DLP+FD+
Sbjct: 70 PGTGNLTARILEKAKSCQVIEMDPRMAAELSKRFQGKPEQRRLEIVIGDFVKADLPFFDV 129
Query: 125 CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
++N PY ISS + F++L H+P R AI+MFQ+EFA+RL A+PG +++CRLS N QL+++
Sbjct: 130 VISNCPYSISSHIVFRILSHRPICRVAILMFQREFALRLCARPGTEMWCRLSANAQLYSK 189
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+ H++KV K NFRPPP+V+SSVVRI P P P V E+DG R+ F R+NKT S F
Sbjct: 190 IDHIMKVSKGNFRPPPQVESSVVRIVPLDPPPPVKFEEFDGLTRVLFTRRNKTCRSNFTA 249
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
V MLE N + A + +N + ++E
Sbjct: 250 AGVYDMLESNRK---AWLTEKNEMIDDSE------------------------------- 275
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
K +V +L + F E RA+K+ +FL LLS F+ IHF
Sbjct: 276 ------------NIKSRVERILVQTGFAESRAAKMDVDDFLKLLSAFHDENIHF 317
>gi|392587330|gb|EIW76664.1| rRNA adenine dimethylase [Coniophora puteana RWD-64-598 SS2]
Length = 325
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 200/325 (61%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP + +IV+KA ++ TD +LE+GPGTGNLT ++LE K AVE+D RM E+
Sbjct: 47 GQHILKNPQIATTIVEKANLRPTDRVLEVGPGTGNLTVRILEKAKHCTAVEMDPRMAAEV 106
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP +L++I GD +K LPYFD+C++N PYQISSPL F+LL H+P FRCAI+M
Sbjct: 107 TKRVQGTPEQRKLEIIIGDFVKATLPYFDVCISNTPYQISSPLVFRLLSHRPIFRCAILM 166
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RL+A+P +L+ RL N QL+A+V ++ VGKNNFRP P V+SSV+R+ PR P
Sbjct: 167 FQREFALRLIARPDTELWSRLGANVQLYAKVDLIMHVGKNNFRPAPLVESSVIRLVPRDP 226
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R+NKT+ + F + V+ M+EKN+RT +
Sbjct: 227 PPPVRFEEFDGLGRIVFSRRNKTIHASFLARGVIDMMEKNWRTWCS-------------- 272
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
+Q V+D +D K KV +L + E+
Sbjct: 273 ------------EQGRMVEDNAD--------------------MKKKVEEILTATGYGEQ 300
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K++ + L LLS F+ GIHF+
Sbjct: 301 RAAKMSIDDLLKLLSAFHDEGIHFA 325
>gi|395326811|gb|EJF59216.1| rRNA adenine dimethylase [Dichomitus squalens LYAD-421 SS1]
Length = 320
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/325 (48%), Positives = 199/325 (61%), Gaps = 46/325 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKNP +SIV A ++ TD +LE+GPGTGNLT ++LE K V AVE+D RM EL
Sbjct: 42 GQHILKNPQTAQSIVDLASLRPTDKVLEVGPGTGNLTVRILEKAKHVSAVEMDPRMAAEL 101
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q P +L++I GD +K LPYFD+C++N PYQISSPL F+LL H+P FR AI+M
Sbjct: 102 TKRVQGKPEQRKLEIIIGDFVKATLPYFDVCISNTPYQISSPLVFRLLSHRPLFRVAILM 161
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA RLVAQPG L+ RLS N QL+A+V ++ V KNNFRPPPKV+SSVVR+ PR P
Sbjct: 162 FQREFATRLVAQPGTALWSRLSANVQLYAKVDLVMNVSKNNFRPPPKVESSVVRVVPRDP 221
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R+NKT+ + F K V+ MLE N++T +S+ N I
Sbjct: 222 PPPVEFGEFDGLGRIIFGRRNKTVHANFMAKGVMEMLETNWKTW--------ASVNNVII 273
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
+DG D FK KV VL E F E
Sbjct: 274 ------------------EDGLD--------------------FKKKVEDVLEETGFAES 295
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LLS F+ AGIHF+
Sbjct: 296 RAAKMDINDLLKLLSAFHDAGIHFA 320
>gi|224143306|ref|XP_002324910.1| predicted protein [Populus trichocarpa]
gi|222866344|gb|EEF03475.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 206/329 (62%), Gaps = 17/329 (5%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
+KSKGQH+L N +++SIV+K+ I TD +LEIGPGTGNLT KLL+ V+AVE+D R
Sbjct: 56 LYKSKGQHLLTNQRILDSIVRKSSINPTDTVLEIGPGTGNLTLKLLDVASKVVAVEIDKR 115
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
MV L +R + + ++L VI+ D LK + P FD+ VANIPY ISSPL KL++ FR
Sbjct: 116 MVGVLNKRVKEHGFEDKLSVIREDALKAEFPKFDLVVANIPYGISSPLVAKLVYGANPFR 175
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
A ++ QKEFA RL+A+PGD + RL+VN +L A V ++ V K +F P PKVDSSVV I
Sbjct: 176 SATLLLQKEFARRLLAKPGDSEFNRLAVNVKLVADVEFVMNVSKRDFFPVPKVDSSVVII 235
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
P+ P VN EW F + CF +KNKTL + F+ K + ++ + S+ +S
Sbjct: 236 RPKDRIPDVNLDEWWAFTKNCFGKKNKTLGATFKQKK---------KVIELFRLSKMTSS 286
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
EI + D +GD +++E D E+ S + E+ FK+K++ VL+ G
Sbjct: 287 NGEEINRNQYVCADDDGD--------NEEESDGEECHSSSCADRELLLFKEKIIEVLKAG 338
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
FE+KR SKL +E LYLLS+ N++GI+F
Sbjct: 339 SFEDKRPSKLCNEELLYLLSMLNQSGIYF 367
>gi|167394422|ref|XP_001733536.1| dimethyladenosine transferase [Entamoeba dispar SAW760]
gi|165894697|gb|EDR22603.1| dimethyladenosine transferase, putative [Entamoeba dispar SAW760]
Length = 252
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/206 (61%), Positives = 161/206 (78%), Gaps = 1/206 (0%)
Query: 20 GQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGK 79
+ +G FHKS+GQHILKNP++ + IV A ++ TDV+LEIGPGTGNLT K+L K
Sbjct: 2 AEPVGTNIFQFHKSEGQHILKNPMIAQQIVDAAELRRTDVVLEIGPGTGNLTMKMLPFCK 61
Query: 80 MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTF 139
+IA+E+D RM EL++R T Y +L++IQGD LK +LPYFD+CV+N PY ISSPL F
Sbjct: 62 KLIAIEIDPRMAAELKKRVSVTDYVKKLEIIQGDFLKVELPYFDVCVSNTPYSISSPLVF 121
Query: 140 KLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
KLL H+P FR A++MFQ+EFAMRLVA+PGD LYCRLSVNTQL A V H++KVG+NNF+PP
Sbjct: 122 KLLNHRPQFRSAVLMFQREFAMRLVAKPGDPLYCRLSVNTQLLADVFHVMKVGRNNFKPP 181
Query: 200 PKVDSSVVRIEPRKPRPQVNPVEWDG 225
PKV+SSVVR+ P KP P +N V+ DG
Sbjct: 182 PKVESSVVRMIPVKPAPPLNLVD-DG 206
>gi|299740974|ref|XP_001834135.2| rRNA (adenine-N6,N6-)-dimethyltransferase [Coprinopsis cinerea
okayama7#130]
gi|298404496|gb|EAU87730.2| rRNA (adenine-N6,N6-)-dimethyltransferase [Coprinopsis cinerea
okayama7#130]
Length = 318
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/325 (45%), Positives = 200/325 (61%), Gaps = 45/325 (13%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKN + IV A +K TD +LE+GPGTGNLT K+LE K V AVE+D RM E+
Sbjct: 39 GQHILKNTQTAQKIVDAANLKPTDKVLEVGPGTGNLTVKILEKAKHVTAVEMDPRMAAEV 98
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP +L+VI GD +K ++PYF++C++N PYQISSPL F+LL H+P FR AI+M
Sbjct: 99 LKRVQGTPEQRKLEVIIGDFVKAEIPYFEVCISNTPYQISSPLVFRLLSHRPLFRVAILM 158
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RLVA+PG L+ RLS N QL+A+V +++ V +N+FRPPP+V+SSV+R+ P P
Sbjct: 159 FQREFALRLVARPGTSLWSRLSANVQLYAKVDNIMHVNRNDFRPPPQVESSVIRLVPLDP 218
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R NKT+ F+ K V+ MLE+N T ++QS
Sbjct: 219 PPPVKFEEFDGLNRIIFSRPNKTVRGNFQAKGVMKMLEQNRNTWLSMQS----------- 267
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEK 334
M VD+ + ++E DK+L EG + E
Sbjct: 268 ---------------MAVDNENTS----------------INELLDKIL---EEGGWTES 293
Query: 335 RASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ E L LL+ F++ GIHFS
Sbjct: 294 RAAKMDIDEILKLLAAFHEVGIHFS 318
>gi|429329661|gb|AFZ81420.1| dimethyladenosine transferase, putative [Babesia equi]
Length = 467
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 201/334 (60%), Gaps = 48/334 (14%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
GG++F K GQH+LKNP +++ IVQ A I+ +D +LEIGPGTGNLT +L+ + VIA++
Sbjct: 148 GGMTFMKKFGQHMLKNPGILDKIVQAAEIRPSDTVLEIGPGTGNLTVRLVPLARKVIAID 207
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQ 145
+DSRMV E+++R Y+N L+V++GD L+ P FD+C AN+PYQISSP FKLL H+
Sbjct: 208 IDSRMVGEVKKRCIQLGYNN-LEVLEGDALRMKFPKFDVCTANLPYQISSPFVFKLLSHR 266
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P FRCA++MFQ+EFA RL+A ++ Y RL++NT+L V+ + KV +F PPPKV+S
Sbjct: 267 PLFRCAVLMFQREFAERLLANTNEEKYGRLAINTRLFCEVTRVCKVAAGSFNPPPKVESM 326
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
+V+I PR V+ EWDG +R+CF RK +TL S+F+ + VLS+LE NY+ +
Sbjct: 327 IVKIVPRDQPLVVDFGEWDGLIRVCFSRKRRTLRSLFKNQAVLSILECNYKAWCTI---- 382
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
N +I D P FKD + V
Sbjct: 383 -----NKQIPEDIP--------------------------------------FKDLCMNV 399
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
L E ++R+ ++ EFL LL FN+AGIHF
Sbjct: 400 LTESGLSDRRSITVSIAEFLKLLLAFNEAGIHFC 433
>gi|310793644|gb|EFQ29105.1| dimethyladenosine transferase [Glomerella graminicola M1.001]
Length = 378
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 159/374 (42%), Positives = 211/374 (56%), Gaps = 24/374 (6%)
Query: 7 RKEKGKQKSGPYQGQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGP 65
++ SGPY + F+ + GQHILKNP + ++IV KA +K TD +LEIGP
Sbjct: 8 KRNAASSSSGPYSRPSQKTNNVFKFNTNVGQHILKNPGVADAIVHKAELKPTDTVLEIGP 67
Query: 66 GTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC 125
GTGNLT ++LE K +IA+E D RM E+ +R Q TP +L+V+ GD +K D FD+
Sbjct: 68 GTGNLTVRILEKSKKLIAIEFDPRMAAEVTKRVQGTPEQRKLEVMLGDAIKVDWVPFDVL 127
Query: 126 VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARV 185
++N PYQISSPL FK+L R AI+MFQ EF RLVA+PGDKLY RLSVN A
Sbjct: 128 ISNTPYQISSPLVFKMLAMPKPPRQAILMFQLEFGQRLVAKPGDKLYGRLSVNANFWATC 187
Query: 186 SHLLKVGKNNFRPPPKVDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTL-SSIF 242
S+++KV K NFRPPP+VDS VVRI P++ RP + E+DG LRICF RKN+T+ +S
Sbjct: 188 SNVMKVSKANFRPPPQVDSCVVRIVPKQGAERPTIAFEEFDGLLRICFNRKNRTMRASWL 247
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGD-----SNGDQSMGVDDGSD 297
K VL MLEKNYRT A+ N L +T + D + G V+ D
Sbjct: 248 GTKEVLQMLEKNYRTWAAM---NNVPLDDTLVEDDEDEAMEMDDDADAGADDDDVEPMVD 304
Query: 298 DEMDVEDDDGDSDVEGE------------VSEFKDKVLAVLREGQFEEKRASKLTQQEFL 345
D + + G + + + + K+ L EKRA + +FL
Sbjct: 305 DTPEFFKELGAAASKAPEKTKSKRKKTKVAALVRSKIERALESTGLLEKRARLCDETDFL 364
Query: 346 YLLSLFNKAGIHFS 359
LLS N GIHF+
Sbjct: 365 KLLSALNSEGIHFA 378
>gi|380476270|emb|CCF44804.1| dimethyladenosine transferase [Colletotrichum higginsianum]
Length = 379
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 160/376 (42%), Positives = 213/376 (56%), Gaps = 27/376 (7%)
Query: 7 RKEKGKQKSGPYQGQGLGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGP 65
++ SGPY + F+ + GQHILKNP + ++IV KAG+K TD +LEIGP
Sbjct: 8 KRNAASSSSGPYSRPSQKTNNVFKFNTNVGQHILKNPGVADAIVHKAGLKPTDTVLEIGP 67
Query: 66 GTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC 125
GTGNLT ++LE K +IA+E D RM E+ +R Q TP +L+V+ GD +K + FD+
Sbjct: 68 GTGNLTVRILEKSKKLIAIEFDPRMAAEVTKRVQGTPEQRKLEVMLGDAIKVEWVPFDVL 127
Query: 126 VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARV 185
++N PYQISSPL FK+L R AI+MFQ EF RLVA+PGDKLY RLSVN A
Sbjct: 128 ISNTPYQISSPLVFKMLAMPKPPRQAILMFQLEFGQRLVAKPGDKLYGRLSVNANFWATC 187
Query: 186 SHLLKVGKNNFRPPPKVDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTL-SSIF 242
S+++KV K NFRPPP+VDS VVRI P++ RP + E+DG LR+CF RKN+T+ +S
Sbjct: 188 SNVMKVSKANFRPPPQVDSCVVRIVPKQGAERPTIAFEEFDGLLRVCFNRKNRTMRASWL 247
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDV 302
K VL MLEKNYRT A+ N L ++ + D D D +DD +
Sbjct: 248 GTKEVLQMLEKNYRTWAAM---NNVPLDDS-LVEDDEDDVMEMDDDEDVGADDNDDVEPM 303
Query: 303 EDDDGD-----SDVEGEVSE--------------FKDKVLAVLREGQFEEKRASKLTQQE 343
+DD + G+ E + K+ L EKRA + +
Sbjct: 304 DDDTPEFFKELGAAAGKAPEKTKSKRKKTKVAALVRSKIERALESTGLLEKRARSCDETD 363
Query: 344 FLYLLSLFNKAGIHFS 359
FL LLS N GIHF+
Sbjct: 364 FLKLLSALNSEGIHFA 379
>gi|124808498|ref|XP_001348329.1| dimethyladenosine transferase, putative [Plasmodium falciparum 3D7]
gi|23497221|gb|AAN36768.1|AE014818_33 dimethyladenosine transferase, putative [Plasmodium falciparum 3D7]
Length = 381
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 204/358 (56%), Gaps = 48/358 (13%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
++ G +K GK+ + Q + +K GQH+LKNP +++ I+ A IKS+D++
Sbjct: 43 VSDGISKKSHGKRNISTSKVQKGNKMNMILYKKHGQHLLKNPGILDKIIYAAKIKSSDIV 102
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LEIG GTGNLT KLL K VI +++DSRM+ E+++R Y+N L+V +GD +KT P
Sbjct: 103 LEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNN-LEVYEGDAIKTVFP 161
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
FD+C ANIPY+ISSPL FKL+ H+P F+CA++MFQKEFA R++A GD Y RL++N +
Sbjct: 162 KFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTINVK 221
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
L +V+ + V +++F PPPKVDS +V++ P++ N EWD LRICF RK KTL +
Sbjct: 222 LFCKVTKVCNVNRSSFNPPPKVDSVIVKLIPKESSFLTNFDEWDNLLRICFSRKRKTLHA 281
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
IF+ VL+MLE NY+ L N ++ + P
Sbjct: 282 IFKRNAVLNMLEHNYKNWCTL---------NKQVPVNFP--------------------- 311
Query: 301 DVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
FK L VL EKR+ L + +FL LL FNK GIHF
Sbjct: 312 -----------------FKKYCLDVLEHLDMCEKRSINLDENDFLKLLLEFNKKGIHF 352
>gi|147794654|emb|CAN73506.1| hypothetical protein VITISV_007907 [Vitis vinifera]
Length = 383
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 155/337 (45%), Positives = 207/337 (61%), Gaps = 17/337 (5%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
G + +KS GQHIL NP ++++IV+K+ IK TD +LEIGPGTGNLT +LL+A + V+A
Sbjct: 42 GEKXMFLYKSWGQHILTNPRVLDTIVRKSNIKPTDTVLEIGPGTGNLTLRLLQAAQRVVA 101
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
V LD+RMV L++R ++L VI D LKTD P FD+ VANIPY ISSPL KL+F
Sbjct: 102 VXLDARMVEILRKRVAEHGLEDQLTVICKDALKTDFPQFDLVVANIPYGISSPLVAKLVF 161
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
FR A ++ QKEFA RL+A PGD + RL+VN +L A V ++ V K +F P PKVD
Sbjct: 162 GANPFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEFVMDVSKRDFLPCPKVD 221
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVV I P+ P V+ EW F R CF +KNKTL + F+ K + L L +
Sbjct: 222 SSVVTIRPKAEIPDVDLNEWCAFTRTCFSKKNKTLGATFKHK-------RRVMELWRLSN 274
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSD--VEGEVSEFKDK 321
+ S GN G N D S D ++ + + +GD E E+S FK+K
Sbjct: 275 LRGSETGNAVSG--------CNYDCSYDEDKEEEEGNERHEGNGDPSPGSEMEMSLFKEK 326
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ VL+ G F++KR +KL+ +E L LLSLFN+AGIHF
Sbjct: 327 INGVLKLGGFDDKRPAKLSGKELLQLLSLFNQAGIHF 363
>gi|403223934|dbj|BAM42064.1| dimethyladenosine transferase [Theileria orientalis strain
Shintoku]
Length = 376
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/334 (42%), Positives = 203/334 (60%), Gaps = 49/334 (14%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ F K GQH+LKNP +++ +VQ A I++TD +LEIGPGTGN+T +L+ + VIAV++
Sbjct: 67 GMVFVKKFGQHMLKNPGVLDKLVQAAEIRTTDTVLEIGPGTGNITVRLVPLARKVIAVDI 126
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D+RM+ E+++R YSN L+VI+ D L+T+ P FD+CVAN+PYQISSP FK+L H+P
Sbjct: 127 DARMIGEVKKRCLQMGYSN-LEVIEADALRTNFPKFDVCVANLPYQISSPFIFKILSHRP 185
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGK-NNFRPPPKVDSS 205
FR AII+FQ+EFA RL+A P D Y RL++NT+L V+ + KV +F PPPKV+S
Sbjct: 186 LFRSAIIIFQREFAERLLASPNDDKYGRLAINTRLFCTVTRVCKVAPGRSFNPPPKVESM 245
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
+V+I PR+ V+ EWDG +R+CF RK +TL S+F+ ++VLS+LE NY++ +
Sbjct: 246 IVKIVPREEPLVVDFGEWDGMIRVCFSRKRRTLRSLFKKQSVLSILESNYKSWCTI---- 301
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
N +I T+ P FKD + V
Sbjct: 302 -----NNQIPTERP--------------------------------------FKDFCMEV 318
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
L E+R+ ++ +FL LL FN+ GIHF
Sbjct: 319 LENSGLSERRSITVSIADFLKLLLAFNEVGIHFC 352
>gi|426193565|gb|EKV43498.1| hypothetical protein AGABI2DRAFT_210241 [Agaricus bisporus var.
bisporus H97]
Length = 326
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 194/326 (59%), Gaps = 48/326 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKN + + A +K TD ++E+GPGTGNLT K+LE K V A+E+D RM E+
Sbjct: 48 GQHILKNAQTCQRCAE-ANLKPTDKVMEVGPGTGNLTIKILEKAKHVTAIEMDPRMAAEV 106
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTD-LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAII 153
+R Q +P +L V+ GD +K + LPYF++C++N PYQISSPL FKLL H+P FR AI+
Sbjct: 107 IKRVQGSPAQRKLDVVIGDFVKVEPLPYFEVCISNTPYQISSPLVFKLLSHRPLFRVAIL 166
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
MFQ+EFA RLVA+PG L+ RLS N QL+A+V +++ V +N+FRPPP+V+SSV+R+ P
Sbjct: 167 MFQREFASRLVARPGTALWSRLSANVQLYAKVDNIINVSRNDFRPPPQVESSVIRMVPID 226
Query: 214 PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
P P V E+DG RI F R NKT+ F+ K V+ MLE+N +T A
Sbjct: 227 PPPPVKFEEFDGMNRIIFSRPNKTVRGNFQAKGVMKMLEQNRKTWMA------------- 273
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEE 333
+ M +DD S SE DK VLR+ + E
Sbjct: 274 -------------TREMPIDDNS-----------------STSELVDK---VLRDAGYME 300
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LLS F+ GIHFS
Sbjct: 301 SRAAKMDVDDLLKLLSAFHDIGIHFS 326
>gi|242045762|ref|XP_002460752.1| hypothetical protein SORBIDRAFT_02g034350 [Sorghum bicolor]
gi|241924129|gb|EER97273.1| hypothetical protein SORBIDRAFT_02g034350 [Sorghum bicolor]
Length = 356
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 199/334 (59%), Gaps = 19/334 (5%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAV 84
G HK +GQH+L NP ++++IV++A I S D ILE+GPGTGNLT +LL + V+AV
Sbjct: 40 GRFRLHKPRGQHLLTNPRVLDAIVRRAAISSGDAILEVGPGTGNLTARLLASHAARVVAV 99
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E+D RMV + R + +++L VI GD ++ + P FD+CVANIPY ISSPL KLLF
Sbjct: 100 EIDPRMVESVTARAAALGLADKLTVIAGDAVEVEFPEFDVCVANIPYGISSPLIAKLLFG 159
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
FR A ++ QKEFA RLVA PGD Y RL+ N +L A V L+ V K +F P P+VDS
Sbjct: 160 PYRFRTATLLLQKEFARRLVATPGDGEYNRLAANVRLVADVRLLMDVSKRDFVPMPRVDS 219
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
S+V I PR P V+ EW F R CF +KNKTL +IF+ K ++ +E R+ +A + +
Sbjct: 220 SLVEIRPRGIAPGVDVSEWLAFTRACFGQKNKTLGAIFKQKRMV--MELFGRSQRAEECA 277
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
SLG + GDS D DDGS+ + ++ EV+ FK++V
Sbjct: 278 GGVSLGALD--------GDSGEDDCGETDDGSNRAVGFSEE--------EVAAFKERVAG 321
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
L + KR SK++ E LL LFNK G+ F
Sbjct: 322 ALDTAELAGKRPSKVSNDELKRLLRLFNKRGVRF 355
>gi|367039157|ref|XP_003649959.1| hypothetical protein THITE_2109142 [Thielavia terrestris NRRL 8126]
gi|346997220|gb|AEO63623.1| hypothetical protein THITE_2109142 [Thielavia terrestris NRRL 8126]
Length = 407
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/268 (51%), Positives = 181/268 (67%), Gaps = 11/268 (4%)
Query: 7 RKEKGKQKSGPYQGQG-------LGAGGI-SFHKSKGQHILKNPLLVESIVQKAGIKSTD 58
++++ SGPY + +G+ I F K GQHILKNP + ++IV+KA +K TD
Sbjct: 6 KQKRAGAGSGPYDRKASKGSKGAVGSTNIFRFDKDIGQHILKNPGISDAIVEKAFLKPTD 65
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK-T 117
V++E+GPGTGN+T + LE K VIA+ELD RM E+ +R Q TP + +L+VI GDV+K
Sbjct: 66 VVVEVGPGTGNITVRALEKVKKVIAIELDPRMGAEVTKRVQGTPLAKKLEVILGDVIKLP 125
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
+LP D ++N PYQISSPL FK+L R A++MFQ+EFA RLVA+PGD LY RLSV
Sbjct: 126 ELPPCDALISNTPYQISSPLVFKMLSMPNPPRVAVLMFQREFAKRLVARPGDALYSRLSV 185
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICFIRKN 235
N A H++KVGK NF+PPPKV+S VVRIEP RP V E+DG LRI F RKN
Sbjct: 186 NVNFWATCKHIMKVGKQNFKPPPKVESDVVRIEPLLGSARPNVAFEEFDGLLRIAFNRKN 245
Query: 236 KTLSSIFRLKNVLSMLEKNYRTLQALQS 263
KTL + F +K VL+M EKNY+ AL +
Sbjct: 246 KTLRAAFAIKEVLAMCEKNYKVYCALHN 273
>gi|378756577|gb|EHY66601.1| dimethyladenosine transferase [Nematocida sp. 1 ERTm2]
Length = 296
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/330 (43%), Positives = 205/330 (62%), Gaps = 39/330 (11%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F K+ GQHILKNP +V +++ +A IK TD +LEIGPGTGNLT KLL+ K V+A+E D +
Sbjct: 5 FKKTFGQHILKNPGIVTTMIDRAKIKPTDTVLEIGPGTGNLTLKLLDKCKRVVAIEKDRK 64
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
+ +L +R S +L+++ D ++ + PYFD+CV+N PYQISSPL FKLL + FR
Sbjct: 65 IASDLIKRVGS--RKTKLQLLIDDAIEVEYPYFDLCVSNTPYQISSPLVFKLLNY--PFR 120
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
++MFQKEFA RL A G YCRLSV+ Q+ A V+H++KV + NFRPPPKV+SS+VRI
Sbjct: 121 ACVLMFQKEFADRLCATAGTSNYCRLSVSVQIRATVTHVMKVSRKNFRPPPKVESSIVRI 180
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EPR+ + ++ E+DG LRICF RKNKT+ SIFR + ++L +N +
Sbjct: 181 EPRRNKLDIDLNEFDGMLRICFSRKNKTIGSIFRQSTIKNLLFQNRDKI----------- 229
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
D P D+N +E +E+ + E EV + VL E
Sbjct: 230 ------ADIPEEEDTN------------NETVIEEKTKITPQEEEV------LNKVLEES 265
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ E++RA+K+ ++FL+LL F +AGI F+
Sbjct: 266 KLEKERAAKMIVEDFLFLLIKFKEAGISFT 295
>gi|387594557|gb|EIJ89581.1| dimethyladenosine transferase [Nematocida parisii ERTm3]
gi|387596597|gb|EIJ94218.1| dimethyladenosine transferase [Nematocida parisii ERTm1]
Length = 298
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 207/330 (62%), Gaps = 39/330 (11%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F K+ GQHILKNP +V +++ KA IK TD +LEIGPGTGNLT KLL+ K V+A+E D +
Sbjct: 5 FKKTFGQHILKNPGIVTNMIDKAKIKPTDTVLEIGPGTGNLTLKLLDKCKRVVAIEKDRK 64
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
+ +L +R + N+L+++ D + + PYFD+CV+N PYQISSPL FKLL + FR
Sbjct: 65 IASDLIKRIGAR--KNKLQLLIEDAIDANYPYFDLCVSNTPYQISSPLVFKLLEY--PFR 120
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
++MFQKEFA RL A PG YCRLSV+ Q+ A V+H+++V K NFRPPPKV+SS+V+I
Sbjct: 121 ACVLMFQKEFADRLCAAPGTSSYCRLSVSVQIRAVVTHIMRVSKKNFRPPPKVESSIVKI 180
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
EPR+ + ++ E+DG LRICF RKNKT+ SIFR + ++L N + + + ++ +L
Sbjct: 181 EPRRNKVDIDLTEFDGMLRICFSRKNKTIGSIFRQNTIKNLLFMNRDKIADI-AEEDDTL 239
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL-AVLRE 328
+ T+ PS ++S ++ +L VL E
Sbjct: 240 AEPAL-TEEPS--------------------------------RKISPEQEAILNKVLEE 266
Query: 329 GQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ E++RA+K+ ++FL+LL F +AGI F
Sbjct: 267 SKLEKERAAKMIVEDFLFLLIKFKEAGISF 296
>gi|294872243|ref|XP_002766218.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239866886|gb|EEQ98935.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 354
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/331 (43%), Positives = 192/331 (58%), Gaps = 46/331 (13%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
+ K GQH+LKNP +++ I++ + IKSTD +LEIGPGTGNLT +LLE K V+A+E+D
Sbjct: 47 LPLQKKFGQHLLKNPGILDKIIEASDIKSTDTVLEIGPGTGNLTMRLLELAKKVVALEID 106
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPA 147
RM E+++R Q+ N LKVI+GD LKT P FD+CVAN+PYQISSP TFKLL H+P
Sbjct: 107 PRMAAEVKKRAQTAGRMN-LKVIEGDALKTQFPVFDVCVANLPYQISSPFTFKLLAHRPV 165
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
FRC +IMFQKEF RLVA+ G+ Y RL++N QL ++V+ + V K +F PPP+VDS +V
Sbjct: 166 FRCGVIMFQKEFGERLVARVGEDNYGRLAINCQLFSKVTRVCNVSKGSFNPPPEVDSMIV 225
Query: 208 RIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNS 267
+ K V+ E+DG LR+ F RKNKTL S F K V+ +LE NY+T +L S
Sbjct: 226 KFVLHKDPINVDFPEFDGLLRVAFTRKNKTLHSSFMNKAVVKVLEDNYKTYCSLHSQP-- 283
Query: 268 SLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLR 327
V+ + FK V LR
Sbjct: 284 -------------------------------------------VQHQGPAFKAHVENTLR 300
Query: 328 EGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
E RA K+ ++L LL F++ GIHF
Sbjct: 301 ASGLAESRAIKIDIDQYLALLLEFHRNGIHF 331
>gi|409075015|gb|EKM75401.1| hypothetical protein AGABI1DRAFT_46548 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 326
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/326 (43%), Positives = 193/326 (59%), Gaps = 48/326 (14%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKN + + A +K TD ++E+GPGTGNLT K+LE K V A+E+D RM E+
Sbjct: 48 GQHILKNAQTCQRCAE-ANLKPTDKVMEVGPGTGNLTIKILEKAKHVTAIEMDPRMAAEV 106
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTD-LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAII 153
+R Q +P +L V+ GD +K + LPYF++C++N PYQISSPL FKLL H+P FR AI+
Sbjct: 107 IKRVQGSPAQRKLDVVIGDFVKVEPLPYFEVCISNTPYQISSPLVFKLLSHRPLFRVAIL 166
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
MFQ+EFA RLVA+PG L+ RLS N QL+A+V +++ V +N+FRPPP+V+SSV+R+ P
Sbjct: 167 MFQREFASRLVARPGTALWSRLSANVQLYAKVDNIINVSRNDFRPPPQVESSVIRMVPID 226
Query: 214 PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
P P V E+DG RI F R NKT+ F+ K V+ MLE+N +T A
Sbjct: 227 PPPPVKFEEFDGMNRIIFSRPNKTVRGNFQAKGVMKMLEQNRKTWMA------------- 273
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEE 333
+ M +DD S SE DKVL + + E
Sbjct: 274 -------------TREMPIDDNS-----------------STSELVDKVLT---DAGYME 300
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHFS 359
RA+K+ + L LLS F+ GIHFS
Sbjct: 301 SRAAKMDIDDLLKLLSAFHDIGIHFS 326
>gi|66475300|ref|XP_627466.1| Dim1p-like ERMB/KSGA methylase [Cryptosporidium parvum Iowa II]
gi|32398681|emb|CAD98641.1| dimethyladenosine transferase, probable [Cryptosporidium parvum]
gi|46228931|gb|EAK89780.1| Dim1p-like ERMB/KSGA methylase [Cryptosporidium parvum Iowa II]
gi|323508725|dbj|BAJ77256.1| cgd6_930 [Cryptosporidium parvum]
gi|323509991|dbj|BAJ77888.1| cgd6_930 [Cryptosporidium parvum]
Length = 385
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 203/357 (56%), Gaps = 48/357 (13%)
Query: 3 GGKIRKE-KGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
G I+K+ Q S +G G + K KGQH+LKN +++ I+ A IK TD +L
Sbjct: 30 GSGIQKQTSNSQNSSHNKGGGSSFVNVILDKKKGQHLLKNTGILDKIILAADIKPTDTVL 89
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
EIGPGTGNLT +LL + V+A ++D RMV E+++R ++ ++N L+V +GD L++
Sbjct: 90 EIGPGTGNLTMRLLPLARKVVAFDIDPRMVAEVKKRSVNSGFNN-LEVREGDALRSSFGD 148
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FD+C AN+PYQISSP FKLL Q +RCA++MFQ+EFA+RL+A+PG+K YCRLSVNT+L
Sbjct: 149 FDVCTANLPYQISSPFVFKLLSLQNKYRCAVLMFQEEFALRLLAEPGEKHYCRLSVNTKL 208
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
++V+ + KV +F PPPKV+S VV+ EP+K VN EWDG +RICF RK KT+ +
Sbjct: 209 FSKVTRVCKVAPGSFNPPPKVNSMVVKFEPKKIPVSVNFREWDGLMRICFSRKKKTIRAN 268
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMD 301
F +VL++LE NY+ ++ +Q GN
Sbjct: 269 FNNSSVLNILENNYKVWSSI--NQKDPCGNM----------------------------- 297
Query: 302 VEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
FK + +L + KR + E+ LL FNK G+HF
Sbjct: 298 ---------------PFKTFIFKILEDSGLSSKRGFNVDINEYFRLLFEFNKNGVHF 339
>gi|357483617|ref|XP_003612095.1| Dimethyladenosine transferase-like protein [Medicago truncatula]
gi|355513430|gb|AES95053.1| Dimethyladenosine transferase-like protein [Medicago truncatula]
Length = 332
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 149/333 (44%), Positives = 196/333 (58%), Gaps = 50/333 (15%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
I F+KS+GQHIL NP ++++IVQK+ I +D +LEIGPGTGNLT KLLEA + V+A+E+
Sbjct: 29 SIYFYKSRGQHILTNPRVLDTIVQKSAINPSDTVLEIGPGTGNLTLKLLEASREVVAIEI 88
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV L+ R N+L VI D L+T+ P FD+ VANIPY ISSPL KL++
Sbjct: 89 DQRMVNILENRALKRGLRNKLTVISKDALRTEFPPFDLVVANIPYGISSPLIIKLIYETT 148
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FR A ++ QKEFA RL+A PGD + RL+VN +L A V ++ V K +F P PKVDSSV
Sbjct: 149 PFRSATLLLQKEFARRLLANPGDSEFNRLAVNIKLLADVEFVMDVSKRDFLPSPKVDSSV 208
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLK-NVLSMLEKNYRTLQALQSSQ 265
V I P+ P VN +W F R CF KNKTL + F+ K VL +LE N
Sbjct: 209 VIIRPKVNVPAVNLHQWRAFTRTCFNNKNKTLGATFKNKRKVLELLEFN----------- 257
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
N +G E DD V FK+K++ V
Sbjct: 258 -------------------NVSGLVG-----------EQDD--------VCLFKEKIVEV 279
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
LREG F++KR SKL+ +E ++LLSLFN+ G++F
Sbjct: 280 LREGGFDDKRPSKLSIEELMHLLSLFNEVGVYF 312
>gi|294899921|ref|XP_002776810.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239884011|gb|EER08626.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 354
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 193/331 (58%), Gaps = 46/331 (13%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
+ K GQH+LKNP +++ I++ + IKSTD +LEIGPGTGNLT +LLE K V+A+E+D
Sbjct: 47 LPLQKKFGQHLLKNPGILDKIIEASDIKSTDTVLEIGPGTGNLTMRLLELAKKVVALEID 106
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPA 147
RM E+++R Q+ N LKVI+GD LKT P FD+CVAN+PYQISSP TFKLL H+P
Sbjct: 107 PRMAAEVKKRAQTAGRMN-LKVIEGDALKTAFPVFDVCVANLPYQISSPFTFKLLAHRPV 165
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
FRC +IMFQKEF RLVA+ G++ Y RL++N QL ++V+ + V K +F PPP+VDS +V
Sbjct: 166 FRCGVIMFQKEFGERLVARVGEENYGRLAINCQLFSKVTRVCNVSKGSFNPPPEVDSMIV 225
Query: 208 RIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNS 267
+ K V+ E+DG LRI F RKNKTL S F K V+ +LE NY+T
Sbjct: 226 KFVLHKDPINVDFPEFDGLLRIAFTRKNKTLHSSFMNKAVIKVLEDNYKTY--------C 277
Query: 268 SLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLR 327
SL N + P+ FK V L+
Sbjct: 278 SLHNQPVQHQGPT-------------------------------------FKAHVENTLK 300
Query: 328 EGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
E RA K+ ++L LL F++ GIHF
Sbjct: 301 ASGLAESRAIKIDIDQYLALLLEFHRNGIHF 331
>gi|340915013|gb|EGS18354.1| dimethyladenosine transferase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 377
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 217/391 (55%), Gaps = 57/391 (14%)
Query: 7 RKEKGKQKSGPYQGQGLGAGGIS---FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEI 63
+ ++ SGPY + G+G + F K GQHILKNP + ++IV+KA +K TDV++E+
Sbjct: 6 KNKRNNAASGPYDKKSKGSGSTNIFKFDKDYGQHILKNPGISDAIVEKAFLKPTDVVVEV 65
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK-TDLPYF 122
GPGTGN+T + LE K VIA+ELD RM E+ +R Q TP + +L+VI GDV+K +P
Sbjct: 66 GPGTGNITVRALERAKKVIAIELDPRMGAEVTKRVQGTPLAKKLEVILGDVIKLPQIPPC 125
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D ++N PYQISSPL FK+L R A++MFQ+EFA RLVA+PGD LY RL+VN
Sbjct: 126 DALISNTPYQISSPLIFKMLSMPQPPRVAVLMFQREFAKRLVAKPGDSLYSRLTVNVNFW 185
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICFIRKNKTLSS 240
A +H++KVGK NF+PPPKV+S VVRIEP RP + E+DG LRI F RKNKTL +
Sbjct: 186 ATCTHIMKVGKANFKPPPKVESDVVRIEPYLGSARPNIAFEEFDGLLRIAFNRKNKTLRA 245
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
F +K +NY+ L + I D L D + M VD D
Sbjct: 246 AFSIK-------ENYKVYCTLHN----------IPLDESVLSDPSLTADMDVD--MDANS 286
Query: 301 DVEDDDG-------------------------------DSDVEGEVSEF-KDKVLAVLRE 328
D ++D+ + + +V+ + K+ VL +
Sbjct: 287 DTDNDNDGDAMEEDDDDMPTFFKEVKEAEAAKEAAKTPSKNPKSKVALIVRAKINKVLTK 346
Query: 329 GQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
KRA + Q +FL LL F++ GIHFS
Sbjct: 347 TGLANKRARQCDQNDFLKLLLAFHEEGIHFS 377
>gi|84996835|ref|XP_953139.1| dimethyladenosine transferase [Theileria annulata strain Ankara]
gi|65304135|emb|CAI76514.1| dimethyladenosine transferase, putative [Theileria annulata]
Length = 377
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 142/351 (40%), Positives = 203/351 (57%), Gaps = 54/351 (15%)
Query: 15 SGPYQGQGL------GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTG 68
+GP Q + A G+ F K GQH+LKNP +++ I++ A I+ TD +LEIGPGTG
Sbjct: 49 AGPVSRQNVETKSYSTASGMIFVKKYGQHMLKNPGVLDKIIKAAEIRPTDTVLEIGPGTG 108
Query: 69 NLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVAN 128
N T +L+ K V+A+++DSRM+ E++ R Y+N L+VI+ D L+T P FDIC+AN
Sbjct: 109 NWTVRLVTLAKKVVAIDVDSRMISEVKNRCFQLGYTN-LEVIEADALRTTFPRFDICMAN 167
Query: 129 IPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL 188
+P+QISSP FKLL H+P FR AI++FQKEFA RL+A D Y RL++NT+L V+ +
Sbjct: 168 LPFQISSPFIFKLLSHRPLFRSAILVFQKEFAERLLASTNDDKYGRLAINTRLFCTVTRI 227
Query: 189 LKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVL 248
K+ +F PPPKVDS VV+I PR+ V+ EWDG +RICF RK +TL S+F+ ++VL
Sbjct: 228 CKISAGSFNPPPKVDSMVVKIVPRQQPLVVDFGEWDGMIRICFSRKRRTLRSLFKKQSVL 287
Query: 249 SMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGD 308
S+LE NY++ + N ++ P
Sbjct: 288 SILESNYKSWCTI---------NNKVPVYKP----------------------------- 309
Query: 309 SDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
FK+ V+ +L E+R+ ++ EFL LL FN+ GIHF
Sbjct: 310 ---------FKEFVIEILESSGLAERRSITVSIAEFLKLLLAFNEVGIHFC 351
>gi|429851949|gb|ELA27106.1| dimethyladenosine transferase dimethyltransferase [Colletotrichum
gloeosporioides Nara gc5]
Length = 379
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 208/350 (59%), Gaps = 23/350 (6%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNP + ++IV KA +K TD +LEIGPGTGNLT ++LE K +IA+E D R
Sbjct: 33 FNTNVGQHILKNPGVADAIVHKAELKPTDTVLEIGPGTGNLTVRILEKSKKLIAIEFDPR 92
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M E+ +R Q TP +L+V+ GD +K D FD+ ++N PYQISSPL FK+L R
Sbjct: 93 MAAEVTKRVQGTPEQRKLEVMLGDAIKVDWVPFDVLISNTPYQISSPLVFKMLAMPKPPR 152
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
AI+MFQ EF RLVA+PGDKLY RLSVN A S+++KV K NFRPPP+VDS VVRI
Sbjct: 153 QAILMFQLEFGQRLVAKPGDKLYGRLSVNANFWATCSNVMKVSKANFRPPPQVDSCVVRI 212
Query: 210 EPRK--PRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQN 266
P++ RP ++ E+DG LRICF RKN+T+ +S K VL MLEKNYRT AL N
Sbjct: 213 VPKQGAERPTISFEEFDGLLRICFNRKNRTMRASWLGTKEVLQMLEKNYRTWAAL---NN 269
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSE--------- 317
L T + D D + D G DD + MD + + +++ ++
Sbjct: 270 VPLDETFVEDDEDDAMDMDDDADAGGDDDDVESMDDDTPEFFKELKANAAKVPEKTKSKR 329
Query: 318 --------FKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ K+ L +KRA + +FL LLS N GIHF+
Sbjct: 330 KKTKVAALVRQKIEGALVSTDLLDKRARACDETDFLKLLSALNSEGIHFA 379
>gi|326531118|dbj|BAK04910.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 199/340 (58%), Gaps = 29/340 (8%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLE-AGKMVIAV 84
G HK +GQH+L NP ++++IV+ A ++ D +LE+GPGTGNLT +LL V AV
Sbjct: 33 GRFRLHKPRGQHLLTNPRVLDAIVRHAALRPGDAVLEVGPGTGNLTARLLAFPVNRVTAV 92
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E D RMV + RF + + +L VIQGD ++T+ P FD+CVANIPY ISSPL KLLF
Sbjct: 93 ETDPRMVDAVTARFGALDMTRKLTVIQGDAMETEFPEFDVCVANIPYGISSPLIAKLLFG 152
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
FR A ++ QKEFA RLVA PGD Y RL+ N + A V L+ V K +F P P+VDS
Sbjct: 153 AYHFRTATLLLQKEFARRLVAMPGDSEYNRLAANVGMVADVKLLMDVSKRDFVPMPRVDS 212
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQS 263
S+V I PR P+V+ EW GF R CF +KNKTL +IF+ K +L +L+++ RT
Sbjct: 213 SLVEIRPRAAPPEVDLAEWLGFTRECFGQKNKTLGAIFKQKRKILDLLKRSQRT------ 266
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEG-----EVSEF 318
+ + G +G +DD +DE ++D+ D EV F
Sbjct: 267 -ERCTGGGIILGV---------------LDDDRNDEACSDEDEESCDRAAGFSTEEVGAF 310
Query: 319 KDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
K+++++ L KR SK++ E LYLL LFN+ GI F
Sbjct: 311 KERIVSALASTGLAGKRPSKMSNDELLYLLRLFNQRGIWF 350
>gi|255548465|ref|XP_002515289.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223545769|gb|EEF47273.1| dimethyladenosine transferase, putative [Ricinus communis]
Length = 177
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 145/180 (80%), Gaps = 6/180 (3%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MAG K++K+K KQ S YQG GISFHKSKGQHILKNPLLV++IVQK+GIKST VI
Sbjct: 1 MAGCKVKKQKPKQSSNHYQG------GISFHKSKGQHILKNPLLVDTIVQKSGIKSTYVI 54
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LEIGPGTGNLTKKLLEAGKMV+ + L F++ L VIQGDVLKTDLP
Sbjct: 55 LEIGPGTGNLTKKLLEAGKMVLLLNLILVWFSSSSAAFRAPLCPIELLVIQGDVLKTDLP 114
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
Y+DICVANIPYQISSPLTFKLL HQP+FRCAIIMFQ+EFAMR VAQPGD LYCRLSVNTQ
Sbjct: 115 YYDICVANIPYQISSPLTFKLLNHQPSFRCAIIMFQREFAMRFVAQPGDTLYCRLSVNTQ 174
>gi|399217042|emb|CCF73729.1| unnamed protein product [Babesia microti strain RI]
Length = 361
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 146/374 (39%), Positives = 203/374 (54%), Gaps = 68/374 (18%)
Query: 6 IRKEKGKQKSGPY--------------------QGQGLGAGGISFHKSKGQHILKNPLLV 45
+RKE+ +S PY Q + + G ++F K GQH+LKNP ++
Sbjct: 15 MRKERKTIRSEPYYSNSISYLDHEDHGLAPRKKQRRTIVTGNMTFEKKIGQHMLKNPGIL 74
Query: 46 ESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSN 105
+ IVQ A I+S+D +LEIGPGTGNLT +L+ + VI++E+DSRMV E++RR + N
Sbjct: 75 DKIVQAAQIRSSDTVLEIGPGTGNLTIRLVPLARQVISLEIDSRMVSEVKRRCLQMGFQN 134
Query: 106 RLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVA 165
L VI+G+ L+ DLP FD+C AN+PYQISSP FKL+ H +RCAI+MFQKEFA RL+A
Sbjct: 135 -LTVIEGNALRIDLPRFDVCTANLPYQISSPFVFKLMAHPHPYRCAILMFQKEFAERLLA 193
Query: 166 QPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDG 225
+ Y RL++NT+L VS + KV +F PPP V+S +V+I PR V+ EWD
Sbjct: 194 NVNEDKYGRLAINTRLFCTVSRVCKVSPGSFNPPPNVESMIVKIVPRPEPLVVDFHEWDA 253
Query: 226 FLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSN 285
+RICF RK +TL S+ + +V+S+LE NY+T +L S + E+
Sbjct: 254 MIRICFSRKRRTLRSLLKTSSVISILETNYKTWCSLNSKIPEPVAMREL----------- 302
Query: 286 GDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFL 345
VL +L E+RA ++ EF
Sbjct: 303 ------------------------------------VLNILDSTGLTERRAITVSIAEFF 326
Query: 346 YLLSLFNKAGIHFS 359
LL FNK GIHF
Sbjct: 327 QLLLAFNKRGIHFC 340
>gi|85099447|ref|XP_960790.1| dimethyladenosine transferase [Neurospora crassa OR74A]
gi|28922314|gb|EAA31554.1| dimethyladenosine transferase [Neurospora crassa OR74A]
Length = 398
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/372 (41%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F K GQHILKNP + ++IV KA +K TDV++E+GPGTGN+T + LE K VIA+ELD R
Sbjct: 37 FDKDFGQHILKNPGISDAIVDKAFLKPTDVVVEVGPGTGNITVRALEKAKKVIAIELDPR 96
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
M E+ +R Q TP + +L+VI GDV+K ++P D ++N PYQISSPL FK+L
Sbjct: 97 MGAEVTKRVQGTPLAKKLEVILGDVIKMPEMPPCDALISNTPYQISSPLIFKMLAMPNPP 156
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
R A++MFQ+EFA RLVA+PGD LY RLSVN A H++KVGK NF+PPPKV+S VVR
Sbjct: 157 RVAVLMFQREFAKRLVARPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPPPKVESDVVR 216
Query: 209 IEPR--KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
IEP RP + E+DG LRI F RKNKTL + F K VL+M E+NY+ L +
Sbjct: 217 IEPLVGSARPNIAFEEFDGLLRIAFNRKNKTLYAGFNQKEVLNMCERNYKVYCTLNN--- 273
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM-------------------------- 300
I D ++ + +D D EM
Sbjct: 274 -------IPIDESLASAADLAAAGATNDAMDVEMDDDNEDNDNEENNDDDEAMEEDEDED 326
Query: 301 ---------DVEDDDGDSDVEGEVSE----FKDKVLAVLREGQFEEKRASKLTQQEFLYL 347
D D + + S+ K K+ VL +KRA + Q +FL L
Sbjct: 327 MPVFFKEQNDANAKDAKTPSKNPKSKVALIVKAKLNKVLTSTGLADKRARQCDQNDFLKL 386
Query: 348 LSLFNKAGIHFS 359
L F++ GIHFS
Sbjct: 387 LLAFHEEGIHFS 398
>gi|336472024|gb|EGO60184.1| dimethyladenosine transferase, partial [Neurospora tetrasperma FGSC
2508]
gi|350294774|gb|EGZ75859.1| dimethyladenosine transferase, partial [Neurospora tetrasperma FGSC
2509]
Length = 397
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/372 (41%), Positives = 205/372 (55%), Gaps = 52/372 (13%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F K GQHILKNP + ++IV KA +K TDV++E+GPGTGN+T + LE K VIA+ELD R
Sbjct: 36 FDKDFGQHILKNPGISDAIVDKAFLKPTDVVVEVGPGTGNITVRALEKAKKVIAIELDPR 95
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
M E+ +R Q TP + +L+VI GDV+K ++P D ++N PYQISSPL FK+L
Sbjct: 96 MGAEVTKRVQGTPLAKKLEVILGDVIKMPEMPPCDALISNTPYQISSPLIFKMLAMPNPP 155
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
R A++MFQ+EFA RLVA+PGD LY RLSVN A H++KVGK NF+PPPKV+S VVR
Sbjct: 156 RVAVLMFQREFAKRLVARPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPPPKVESDVVR 215
Query: 209 IEPR--KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
IEP RP + E+DG LRI F RKNKTL + F K VL+M E+NY+ L +
Sbjct: 216 IEPLVGSARPNIAFEEFDGLLRIAFNRKNKTLYAGFNQKEVLNMCERNYKVYCTLNN--- 272
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM-------------------------- 300
I D ++ + +D D EM
Sbjct: 273 -------IPIDESLASAADLAAAGATNDAMDVEMDDDNEDNDNEENNDDDEAMEEDEDED 325
Query: 301 ---------DVEDDDGDSDVEGEVSE----FKDKVLAVLREGQFEEKRASKLTQQEFLYL 347
D D + + S+ K K+ VL +KRA + Q +FL L
Sbjct: 326 MPVFFKEQNDANAKDAKTPSKNPKSKVALIVKAKLNKVLTSTGLADKRARQCDQNDFLKL 385
Query: 348 LSLFNKAGIHFS 359
L F++ GIHFS
Sbjct: 386 LLAFHEEGIHFS 397
>gi|353243217|emb|CCA74785.1| probable rRNA (adenine-N6,N6-)-dimethyltransferase [Piriformospora
indica DSM 11827]
Length = 330
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 164/243 (67%), Gaps = 4/243 (1%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQHILKN + ++IV+KA +K TD +LE+GPGTGNLT +LE K V AVE D RM EL
Sbjct: 61 GQHILKNKAVAQAIVEKANLKPTDSVLEVGPGTGNLTVLILEKAKHVTAVEADPRMAAEL 120
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R Q TP +L + GD +K +LP+FD+C++N PYQISSPL F+LL H+P R AI+M
Sbjct: 121 VKRVQGTPEQRKLDITVGDFVKAELPFFDVCISNTPYQISSPLVFRLLSHRPLPRVAILM 180
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ+EFA+RL A PG + + RLS N QL+A+V H++KV +NNF PPP V+SSVVRI P P
Sbjct: 181 FQREFALRLTATPGTEFWSRLSANVQLYAKVDHIMKVSRNNFIPPPNVESSVVRITPLSP 240
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
P V E+DG RI F R+NKT + F+ V M++ N+ + Q +Q G T +
Sbjct: 241 PPPVRFEEFDGLTRILFTRRNKTCRANFQASGVEKMMKDNWSQWKREQKAQ----GKTSM 296
Query: 275 GTD 277
D
Sbjct: 297 DVD 299
>gi|414590381|tpg|DAA40952.1| TPA: hypothetical protein ZEAMMB73_963520 [Zea mays]
Length = 361
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 197/334 (58%), Gaps = 18/334 (5%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAV 84
G HK +GQH+L NP ++++I + A I D +LE+GPGTGNLT +LL + V AV
Sbjct: 44 GRFRLHKPRGQHLLTNPRVLDAIARHAAISPGDAVLEVGPGTGNLTARLLASQAARVTAV 103
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E+D RMV + R + +++ KVI GD ++ + P FD+CVANIPY ISSPL KLLF
Sbjct: 104 EIDPRMVEAVTARAAALGLAHKFKVIAGDAVEVEFPEFDVCVANIPYGISSPLIAKLLFG 163
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
FR A ++ QKEFA RLVA PGD Y RL+ N +L A V L+ V K +F P P+VDS
Sbjct: 164 PYRFRTATLLLQKEFARRLVAAPGDGEYNRLAANVRLVADVRLLMDVSKRDFVPMPRVDS 223
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
S+V I PR P V+ EW F R+CF +KNKTL++IF+ K ++ L + R+L+ + +
Sbjct: 224 SLVEIRPRGTVPGVDVSEWLAFTRVCFGQKNKTLAAIFKQKRMVVELLR--RSLRTERCA 281
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
SLG E+ DS D G DDGS+ + ++ EV+ FK+KV
Sbjct: 282 GGVSLGPLEV-------DDSGEDDCGGNDDGSNRVVGFSEE--------EVAAFKEKVAG 326
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
L + KR SK++ E LL LFN G+ F
Sbjct: 327 ALDTAELAGKRPSKVSNDELKRLLRLFNDRGVRF 360
>gi|110590504|pdb|2H1R|A Chain A, Crystal Structure Of A Dimethyladenosine Transferase From
Plasmodium Falciparum
gi|110590505|pdb|2H1R|B Chain B, Crystal Structure Of A Dimethyladenosine Transferase From
Plasmodium Falciparum
Length = 299
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 192/325 (59%), Gaps = 48/325 (14%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLE 93
+GQH+LKNP +++ I+ A IKS+D++LEIG GTGNLT KLL K VI +++DSRM+ E
Sbjct: 20 QGQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISE 79
Query: 94 LQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAII 153
+++R Y+N L+V +GD +KT P FD+C ANIPY+ISSPL FKL+ H+P F+CA++
Sbjct: 80 VKKRCLYEGYNN-LEVYEGDAIKTVFPKFDVCTANIPYKISSPLIFKLISHRPLFKCAVL 138
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
MFQKEFA R++A GD Y RL++N +L +V+ + V +++F PPPKVDS +V++ P++
Sbjct: 139 MFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLIPKE 198
Query: 214 PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
N EWD LRICF RK KTL +IF+ VL+MLE NY+ L N +
Sbjct: 199 SSFLTNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLEHNYKNWCTL---------NKQ 249
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEE 333
+ + P FK L VL E
Sbjct: 250 VPVNFP--------------------------------------FKKYCLDVLEHLDMCE 271
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHF 358
KR+ L + +FL LL FNK GIHF
Sbjct: 272 KRSINLDENDFLKLLLEFNKKGIHF 296
>gi|449464528|ref|XP_004149981.1| PREDICTED: probable dimethyladenosine transferase-like [Cucumis
sativus]
Length = 352
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 201/357 (56%), Gaps = 66/357 (18%)
Query: 2 AGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
A G +RK+ +++ Y F+KS+GQHIL N +++SIV+K+ I TD +L
Sbjct: 39 ANGNLRKKDENEEAHLY-----------FYKSRGQHILTNQRILDSIVRKSAILPTDTVL 87
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
EIGPGTGNLT KLLEA + VIAVE+D RMV L +R +R+ VI D LK + P+
Sbjct: 88 EIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVLHKRVVEHQLEDRICVICQDALKCEFPH 147
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FD+ VANIPY ISSPL KL++ FR A ++ QKEFA RL+A PGD Y RL+VN +L
Sbjct: 148 FDLVVANIPYGISSPLVAKLVYGTIPFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKL 207
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
A V H++ V K +F P PKVDSSVV I P+K P+VN EW F R CF +KNKTL +
Sbjct: 208 VADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKEVPEVNLEEWRAFTRTCFGKKNKTLGAT 267
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMD 301
F+ K R L L S
Sbjct: 268 FKQK----------RKLMDLMHS------------------------------------- 280
Query: 302 VEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ +EG + F++ V+ VL+ G FE+KR KL +E L+LL+LFN++GI+F
Sbjct: 281 -------NSMEG-FNSFRETVIQVLKSGDFEDKRPVKLCNEELLHLLALFNQSGIYF 329
>gi|449491400|ref|XP_004158885.1| PREDICTED: probable dimethyladenosine transferase-like [Cucumis
sativus]
Length = 352
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 201/357 (56%), Gaps = 66/357 (18%)
Query: 2 AGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
A G +RK+ +++ Y F+KS+GQHIL N +++SIV+K+ I TD +L
Sbjct: 39 ANGNLRKKDENEEAHLY-----------FYKSRGQHILTNQRILDSIVRKSAILPTDTVL 87
Query: 62 EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
EIGPGTGNLT KLLEA + VIAVE+D RMV L +R +R+ VI D LK + P+
Sbjct: 88 EIGPGTGNLTLKLLEASQKVIAVEIDKRMVEVLHKRVAEHQLEDRICVICQDALKCEFPH 147
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
FD+ VANIPY ISSPL KL++ FR A ++ QKEFA RL+A PGD Y RL+VN +L
Sbjct: 148 FDLVVANIPYGISSPLVAKLVYGTIPFRSATLLLQKEFARRLLADPGDSEYNRLAVNVKL 207
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
A V H++ V K +F P PKVDSSVV I P+K P+VN EW F R CF +KNKTL +
Sbjct: 208 VADVEHVMDVSKRDFVPCPKVDSSVVLIRPKKEVPKVNLEEWRAFTRTCFGKKNKTLGAT 267
Query: 242 FRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMD 301
F+ K R L L S
Sbjct: 268 FKQK----------RKLMDLMHS------------------------------------- 280
Query: 302 VEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ +EG + F++ V+ VL+ G FE+KR KL +E L+LL+LFN++GI+F
Sbjct: 281 -------NSMEG-FNSFRETVIQVLKSGDFEDKRPVKLCNEELLHLLALFNQSGIYF 329
>gi|221060378|ref|XP_002260834.1| dimethyladenosine transferase [Plasmodium knowlesi strain H]
gi|193810908|emb|CAQ42806.1| dimethyladenosine transferase, putative [Plasmodium knowlesi strain
H]
Length = 384
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 191/329 (58%), Gaps = 48/329 (14%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
+K GQH+LKNP +++ I+ A IKS+DV+LEIG GTGNLT KLL K VI +++D+R
Sbjct: 61 LYKKHGQHLLKNPGILDKILLAAKIKSSDVVLEIGCGTGNLTVKLLPIAKKVITIDIDAR 120
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
MV E+++R Y+N L+V +GD +KT P FDIC ANIPY+ISSPL FKL+ H+P F+
Sbjct: 121 MVSEVKKRCLYEGYNN-LEVYEGDAIKTVFPRFDICTANIPYKISSPLVFKLIAHRPLFK 179
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
CA++MFQKEFA R++A GD Y RL+VN +L +V + V +++F PPPKVDS ++++
Sbjct: 180 CAVLMFQKEFAERMLANVGDSNYSRLTVNVKLFCKVIKICNVDRSSFNPPPKVDSVILKL 239
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
P++ VN EWD LRICF RK KTL +IF+ VL+MLE NY+
Sbjct: 240 IPKENNFFVNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLEHNYKNFCTF-------- 291
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
N + + P FK L L+E
Sbjct: 292 -NKIVPVNFP--------------------------------------FKKYCLDTLKEL 312
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
E R+ L + +FL LL FN+ GIHF
Sbjct: 313 DMTECRSVSLDENDFLKLLLKFNEKGIHF 341
>gi|168064371|ref|XP_001784136.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664336|gb|EDQ51060.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 274
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/227 (60%), Positives = 162/227 (71%), Gaps = 18/227 (7%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
MAGGK + KGK +Q I F KSKGQHILKNPLL S+ +K + + +
Sbjct: 54 MAGGK--EVKGKIAPQRFQE-------IQFQKSKGQHILKNPLLRRSLFKKTSLLFSTIR 104
Query: 61 L---EIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKV-----IQG 112
+ ++ GNLT KLLE K VIAVELD RMVLE+ RR Q TP +N+L+V IQ
Sbjct: 105 VSYADVSLLLGNLTMKLLEVCK-VIAVELDPRMVLEVTRRVQGTPCANKLQVWMLAVIQC 163
Query: 113 DVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLY 172
+LKT+LPYFD+CVAN+PY ISSP+TFKLL H P RCA+I+FQ+EFA LVAQPGD L+
Sbjct: 164 YILKTELPYFDVCVANVPYMISSPITFKLLSHPPLVRCAVILFQEEFAQHLVAQPGDSLF 223
Query: 173 CRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVN 219
CRLS NTQL ARV HLLKVGKNN RPPPKVDSSVVRIEPR P P +N
Sbjct: 224 CRLSANTQLLARVFHLLKVGKNNLRPPPKVDSSVVRIEPRNPLPPIN 270
>gi|336268929|ref|XP_003349226.1| hypothetical protein SMAC_05510 [Sordaria macrospora k-hell]
gi|380089800|emb|CCC12332.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 401
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/364 (42%), Positives = 206/364 (56%), Gaps = 35/364 (9%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F K GQHILKNP + ++IV KA +K TDV++EIGPGTGN+T + LE K VIA+++D R
Sbjct: 39 FDKDYGQHILKNPGISDAIVDKAFLKPTDVVVEIGPGTGNITVRALEKAKKVIAIDIDPR 98
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
M E+ +R Q TP + +L+VI GDV+K ++P D ++N PYQISSPL FK+L
Sbjct: 99 MGAEVTKRVQGTPLAKKLEVILGDVIKMPEMPPCDALISNTPYQISSPLIFKMLAMPNPP 158
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
R A++MFQ+EFA RLVA+PGD LY RLSVN A H++KVGK NF+PPPKV+S VVR
Sbjct: 159 RVAVLMFQREFAKRLVARPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPPPKVESDVVR 218
Query: 209 IEPR--KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS-SQ 265
IEP RP + E+DG LRI F RKNKTL + F K VL+M E+NY+ L +
Sbjct: 219 IEPLIGSARPNIAFEEFDGLLRIAFNRKNKTLYAGFNQKEVLNMCERNYKVYCTLNNIPI 278
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGS--------------------------DDE 299
+ SL + + D D M DD ++
Sbjct: 279 DESLASAADIAAAGATTDDAMDVEMD-DDAQDNENEEENNDDEAMEEDEDEDMPVFFKEQ 337
Query: 300 MDVEDDDGDSDVEGEVSEF----KDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAG 355
D D + + S+ K K+ VL +KRA Q +FL LL F++ G
Sbjct: 338 NDANTKDSKTPSKNPKSKVALIVKAKLNKVLASTGLADKRARMCDQNDFLKLLLAFHEEG 397
Query: 356 IHFS 359
IHFS
Sbjct: 398 IHFS 401
>gi|303388914|ref|XP_003072690.1| dimethyladenosine transferase [Encephalitozoon intestinalis ATCC
50506]
gi|303301832|gb|ADM11330.1| dimethyladenosine transferase [Encephalitozoon intestinalis ATCC
50506]
Length = 277
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 194/330 (58%), Gaps = 59/330 (17%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+K GQHILKN ++++I+++A IK TD +LEIG GTGNLT KLL+ K VI E+D R
Sbjct: 6 FNKQHGQHILKNMGVIDTIIERAKIKPTDTVLEIGGGTGNLTMKLLQKAKKVICYEIDPR 65
Query: 90 MVLELQRRFQSTP-YSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
+ EL ++ TP + + ++ GD LK D P+FD+C++N+PYQISSP FKLL + F
Sbjct: 66 LAAELAKKVNGTPGMAQKFQLFVGDALKHDFPHFDLCISNLPYQISSPFMFKLLKYD--F 123
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
+CA IMFQ+EF+ RLVA+PG YCRLSV Q+ A+V H+LKV KN+F PPPK++SS VR
Sbjct: 124 KCAFIMFQREFSDRLVAKPGSSEYCRLSVGAQMLAQVDHVLKVSKNSFVPPPKIESSFVR 183
Query: 209 IEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSS 268
IEPR PRP ++ E+D FL+ICF+RKNKTL + FR +++S ++
Sbjct: 184 IEPRIPRPPIDLEEFDRFLKICFLRKNKTLKANFRNSSLVSKVK---------------- 227
Query: 269 LGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLRE 328
GN TP EV E VL
Sbjct: 228 -GNPSFENTTPE---------------------------------EVFE------KVLSR 247
Query: 329 GQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ + RA+K++ +FL LL F K GI+F
Sbjct: 248 AELDGARAAKMSIDDFLALLLEFRKVGIYF 277
>gi|297735070|emb|CBI17432.3| unnamed protein product [Vitis vinifera]
Length = 383
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 194/335 (57%), Gaps = 49/335 (14%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
G + +KS GQHIL NP ++++IV+K+ IK TD +LEIGPGTGNLT +LL+A + V+A
Sbjct: 42 GEKHMFLYKSWGQHILTNPRVLDTIVRKSNIKPTDTVLEIGPGTGNLTLRLLQAAQRVVA 101
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
VELD+RMV L++R ++L VI D LKTD P FD+ VANIPY ISSPL KL+F
Sbjct: 102 VELDARMVEILRKRVAEHGLEDQLTVICKDALKTDFPQFDLVVANIPYGISSPLVAKLVF 161
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
FR A ++ QKEFA RL+A PGD + RL+VN +L A V ++ V K +F P PKVD
Sbjct: 162 GANPFRSATLLLQKEFARRLLANPGDSEFNRLAVNVKLVAEVEFVMDVSKRDFLPCPKVD 221
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
SSVV I P+ P V+ EW F R CF +KNKTL + F+ K + L L +
Sbjct: 222 SSVVTIRPKAEVPDVDLNEWCAFTRTCFSKKNKTLGATFKHK-------RRVMELWRLSN 274
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
+ S GN +S FK+K+
Sbjct: 275 LRGSETGNA------------------------------------------MSLFKEKIN 292
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
VL+ G F++KR +KL+ +E L LLSLFN+AGIHF
Sbjct: 293 GVLKLGGFDDKRPAKLSGKELLQLLSLFNQAGIHF 327
>gi|30698221|ref|NP_201437.2| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
gi|21539437|gb|AAM53271.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana]
gi|31711838|gb|AAP68275.1| At5g66360 [Arabidopsis thaliana]
gi|332010820|gb|AED98203.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
thaliana]
Length = 352
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/332 (44%), Positives = 199/332 (59%), Gaps = 51/332 (15%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ KSKGQH+L N +++SIV+ + I+ TD +LEIGPGTGNLT KLLEA + V+AVEL
Sbjct: 60 GLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVEL 119
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV L++R ++++L +IQ DVLKTD P+FD+ VANIPY ISSPL KL++
Sbjct: 120 DKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLVVANIPYNISSPLVAKLVYGSN 179
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FR A ++ QKEF+ RL+A PGD + RL+VN
Sbjct: 180 TFRSATLLLQKEFSRRLLANPGDSDFNRLAVN---------------------------- 211
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
V+I P++ P VN EW F R CF +KNKTL S+FR K K LQ+L + ++
Sbjct: 212 VKITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQK-------KKVMELQSLSAGRH 264
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
S N E+ T GDS+ D +DG DD + ++ D S FK++V+ +L
Sbjct: 265 GS--NVEVMNQTG--GDSDSDVE---EDGKDDLLCLDTD---------ASMFKERVIEIL 308
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
R FEEKR SKL+ +E L+LLSLFN+AGI F
Sbjct: 309 RTNGFEEKRPSKLSHRELLHLLSLFNQAGIFF 340
>gi|68071473|ref|XP_677650.1| dimethyladenosine transferase [Plasmodium berghei strain ANKA]
gi|56497848|emb|CAH94950.1| dimethyladenosine transferase, putative [Plasmodium berghei]
Length = 381
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/351 (41%), Positives = 202/351 (57%), Gaps = 49/351 (13%)
Query: 9 EKGKQKSGPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
+KGKQ++ G + +K GQH+LKNP +++ I+ A IKS+D++LEIG GT
Sbjct: 51 KKGKQRNISTSKVNNGNRMNMILYKKHGQHLLKNPGILDKIIMAAKIKSSDIVLEIGCGT 110
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GNLT KLL K VI +++D+RM+ E+++R Y+N L+V +GD +KT P FD+C A
Sbjct: 111 GNLTVKLLPLSKKVITIDIDARMISEVKKRCLYEGYNN-LEVYEGDAIKTIFPKFDVCTA 169
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
NIPY+ISSPL FKL+ H+P F+CA++MFQKEFA R++A GD Y RL+VN +L RV
Sbjct: 170 NIPYKISSPLIFKLIAHRPLFKCAVLMFQKEFAERMLANVGDNNYSRLTVNVKLFCRVIK 229
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
+ V +++F PPPKVDS V+++ P++ +N EWD LRICF RK KTL +IF+ V
Sbjct: 230 VCNVDRSSFNPPPKVDSIVLKLIPKENNSMINFDEWDNLLRICFSRKRKTLHAIFKRNAV 289
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
L+MLE NY+ N N I + ++ +D D EM
Sbjct: 290 LNMLEHNYK---------NYCTFNKIIPINYSF-------KTFCLDTLKDLEM------- 326
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
EE+R+ L + +FL LL FNK GI F
Sbjct: 327 ------------------------EEQRSINLDENDFLKLLLEFNKKGIRF 353
>gi|148686526|gb|EDL18473.1| RIKEN cDNA 1500031M22, isoform CRA_a [Mus musculus]
gi|148686527|gb|EDL18474.1| RIKEN cDNA 1500031M22, isoform CRA_a [Mus musculus]
Length = 236
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/258 (51%), Positives = 165/258 (63%), Gaps = 46/258 (17%)
Query: 102 PYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAM 161
P +++L+V+ GDVLK+DLP+FD CVAN+PYQISSP FKLL H+P FRCAI+MFQ+EFA+
Sbjct: 25 PLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFAL 84
Query: 162 RLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPV 221
RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N
Sbjct: 85 RLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQ 144
Query: 222 EWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSL 281
EWDG +RI F+RKNKTLS+ F+ V +LEKNYR + S+ NT I D S+
Sbjct: 145 EWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI--------HCSVQNTVIPEDF-SI 195
Query: 282 GDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQ 341
D K+ +L F +KRA +
Sbjct: 196 AD-------------------------------------KIQQILTSTGFSDKRARSMDI 218
Query: 342 QEFLYLLSLFNKAGIHFS 359
+F+ LL FN GIHFS
Sbjct: 219 DDFIRLLHGFNAEGIHFS 236
>gi|70953687|ref|XP_745929.1| dimethyladenosine transferase [Plasmodium chabaudi chabaudi]
gi|56526401|emb|CAH78914.1| dimethyladenosine transferase, putative [Plasmodium chabaudi
chabaudi]
Length = 379
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/351 (41%), Positives = 200/351 (56%), Gaps = 49/351 (13%)
Query: 9 EKGKQKSGPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
+KGKQ++ G + K GQH+LKNP +++ I+ A IKS+DV+LEIG GT
Sbjct: 51 KKGKQRNISTSKVNNGNRMNMVLFKKHGQHLLKNPGILDKIIIAAKIKSSDVVLEIGCGT 110
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GNLT KLL K VI +++D+RM+ E+++R YSN L+V +GD +KT P FD+C A
Sbjct: 111 GNLTIKLLPLAKKVITIDIDARMISEVKKRCLYEGYSN-LEVYEGDAIKTIFPRFDVCTA 169
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
NIPY+ISSPL FKL+ H+P F+CA++MFQKEFA R++A GD Y RL+VN +L RV
Sbjct: 170 NIPYKISSPLIFKLIAHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTVNVKLFCRVIK 229
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
+ V +++F PPPKVDS V+++ P++ +N EWD LRICF RK KTL +IF+ V
Sbjct: 230 VCNVDRSSFNPPPKVDSIVLKLIPKENNSMINFDEWDNLLRICFSRKRKTLHAIFKRNAV 289
Query: 248 LSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDG 307
L+MLE NY+ +I S ++ +D D EM
Sbjct: 290 LNMLEHNYKNYCTFN----------KIVPINYSF------KTFCLDTLKDLEM------- 326
Query: 308 DSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
EE+R+ L + +FL LL FNK GI F
Sbjct: 327 ------------------------EEQRSINLDENDFLKLLLEFNKKGIRF 353
>gi|402470190|gb|EJW04579.1| dimethyladenosine transferase [Edhazardia aedis USNM 41457]
Length = 277
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/224 (55%), Positives = 164/224 (73%), Gaps = 3/224 (1%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+K GQHIL N ++++I+ +A IKSTDV+LEIG GTGNLT KLLE K V+ E D R
Sbjct: 6 FNKKLGQHILVNQTIIDTIITRAKIKSTDVVLEIGGGTGNLTMKLLEKAKRVVCYEKDPR 65
Query: 90 MVLELQRRFQSTP-YSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
+ +EL ++ S N+ ++I GD LK D PYFD+C++NIPYQISSPLTFKLL + F
Sbjct: 66 LAMELVKKVNSVKGLVNKFELIVGDALKHDFPYFDLCISNIPYQISSPLTFKLLSYN--F 123
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
A +MFQKEFA RLVA+PG K +CRLSV Q+ A H+L V K NFRPPPKV+SSVV+
Sbjct: 124 NAAYLMFQKEFADRLVAKPGSKEWCRLSVAVQIVANTEHVLNVSKKNFRPPPKVESSVVK 183
Query: 209 IEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
I+PR P+P +N E + L+ICF+R+NKTL SIF+ K V ++++
Sbjct: 184 IKPRYPKPPINLEELNKLLKICFLRRNKTLGSIFKGKGVKNIIK 227
>gi|82753583|ref|XP_727737.1| dimethyladenosine transferase [Plasmodium yoelii yoelii 17XNL]
gi|23483724|gb|EAA19302.1| dimethyladenosine transferase, putative [Plasmodium yoelii yoelii]
Length = 394
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 191/331 (57%), Gaps = 52/331 (15%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
+K GQH+LKNP +++ I+ A IKS+D++LEIG GTGNLT KLL K VI +++D+R
Sbjct: 46 LYKKHGQHLLKNPGILDKIIMAAKIKSSDIVLEIGCGTGNLTIKLLPLAKKVITIDIDAR 105
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M+ E+++R Y+N L+V +GD +KT P FD+C ANIPY+ISSPL FKL+ H+P F+
Sbjct: 106 MISEVKKRCLYEGYNN-LEVYEGDAIKTIFPKFDVCTANIPYKISSPLIFKLIAHRPLFK 164
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
CA++MFQKEFA R++A GD Y RL+VN +L RV + V +++F PPPKVDS V+++
Sbjct: 165 CAVLMFQKEFAERMLANVGDSNYSRLTVNVKLFCRVIKVCNVDRSSFNPPPKVDSIVLKL 224
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS--SQNS 267
P++ +N EWD LRICF RK KTL +IF+ VL+MLE NY+ N
Sbjct: 225 IPKENNSMINFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLEHNYKNYCTFNKIVPINY 284
Query: 268 SLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLR 327
S ++ +D D EM
Sbjct: 285 SF------------------KTFCLDTLKDLEM--------------------------- 299
Query: 328 EGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
EE+R+ L + +FL LL FNK GI F
Sbjct: 300 ----EEQRSINLDENDFLKLLLEFNKKGIRF 326
>gi|255560978|ref|XP_002521501.1| dimethyladenosine transferase, putative [Ricinus communis]
gi|223539179|gb|EEF40772.1| dimethyladenosine transferase, putative [Ricinus communis]
Length = 366
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 199/334 (59%), Gaps = 20/334 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
+ +KSKGQH+L NP ++++IV+++ ++ TD +LEIGPGTGNLT +LLE + V+AVE+D
Sbjct: 51 LHLYKSKGQHLLTNPRVLDTIVRRSAVEPTDTVLEIGPGTGNLTLRLLEVARKVVAVEID 110
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPA 147
RMV L+ R ++L +I D LK + P F+I VANIPY ISSPL KL++
Sbjct: 111 KRMVEILRERASEQGLQDKLDIIHKDALKAEFPNFNIVVANIPYGISSPLVTKLVYGVNK 170
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
FR ++ QKEFA RL+A PGD Y RL+VN +L A V ++ V K +F P PKVDSSVV
Sbjct: 171 FRSLTLLLQKEFARRLLANPGDPEYNRLAVNVKLVADVEFVMDVSKRDFVPSPKVDSSVV 230
Query: 208 RIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL-KNVLSMLEKNYRTLQALQSSQN 266
I P+ P VN VEW F R CF KNKTL +IF+ K V+ +L + + S +
Sbjct: 231 IIRPKTEIPSVNLVEWRAFTRTCFGNKNKTLGAIFKQKKKVMELLR-----MHNMTSCNS 285
Query: 267 SSLGNTEIGTDTPSLGDSNGD-QSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
S N D + N D + G S EM EVS +K++++ V
Sbjct: 286 KSRVNANDDDDDDHNHNENSDGEGEGGHFCSCSEM-------------EVSFYKERIIEV 332
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
L+ FE R SKL+ +E + LLSL N+AG+ F+
Sbjct: 333 LKANGFEGNRPSKLSNKELVNLLSLLNQAGVFFT 366
>gi|401825954|ref|XP_003887071.1| dimethyladenosine transferase [Encephalitozoon hellem ATCC 50504]
gi|392998229|gb|AFM98090.1| dimethyladenosine transferase [Encephalitozoon hellem ATCC 50504]
Length = 277
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 166/226 (73%), Gaps = 3/226 (1%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+K GQHILKN +V++I+++A IK TDV+LEIG GTGNLT KLL+ K VI E+D R
Sbjct: 6 FNKQHGQHILKNLGVVDTIIERARIKPTDVVLEIGGGTGNLTMKLLQKAKKVICYEIDPR 65
Query: 90 MVLELQRRFQSTP-YSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
+ EL +R P + + ++ GD LK D P+FD+C+ N+PYQISSP FKLL + F
Sbjct: 66 LAAELAKRVNGVPGMAQKFQLFVGDALKHDFPHFDLCITNLPYQISSPFVFKLLKYD--F 123
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
+CA +MFQ+EF+ RLVA+PG YCRLSV Q+ A++ H+LKV KN+F PPPKV+SS VR
Sbjct: 124 KCAYVMFQREFSNRLVARPGSPEYCRLSVGAQMLAQIDHVLKVSKNSFVPPPKVESSFVR 183
Query: 209 IEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN 254
IEPR PRP ++ E+D FL+ICF+RKNKTL + F+ ++L+ ++ N
Sbjct: 184 IEPRVPRPPIDFEEFDRFLKICFLRKNKTLKANFKNSSLLNKIKNN 229
>gi|242788270|ref|XP_002481185.1| dimethyladenosine transferase [Talaromyces stipitatus ATCC 10500]
gi|218721332|gb|EED20751.1| dimethyladenosine transferase [Talaromyces stipitatus ATCC 10500]
Length = 421
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/435 (37%), Positives = 223/435 (51%), Gaps = 94/435 (21%)
Query: 4 GKIRKEKGKQKSG--PYQGQGLGAGGIS------FHKSKGQHILKNPLLVESIVQKAGIK 55
GKI+ +K S PY + L +G + F+ GQHILKNP + ++IV KA IK
Sbjct: 2 GKIQPKKRNSSSAGSPYT-KNLPSGSLKKNPIFKFNTDIGQHILKNPGIADAIVDKANIK 60
Query: 56 STDV------------------ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRR 97
+V I ++GPGTG LT+++L K A+ELD RM EL +
Sbjct: 61 EHEVVADMLSISCKTRIAQADNIAQVGPGTGVLTRRILAKAKSCTAIELDPRMAAELTKM 120
Query: 98 FQSTPYSNRLKVIQGDVLKTDLP---YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
Q TP +LK+I GD +K DL +FD+ ++N PYQISSPL FKLL R +I+M
Sbjct: 121 VQGTPMQRKLKIILGDFIKVDLKEIGHFDVFISNTPYQISSPLVFKLLAMPRPPRVSILM 180
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
Q+EFA RL+A+PGD +Y RLSVN Q HA SH+LKVGKNNF PPP+V+SSVVRIEPR
Sbjct: 181 VQREFAQRLIARPGDAMYSRLSVNAQFHAICSHILKVGKNNFSPPPQVESSVVRIEPRPD 240
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEI 274
RP ++ E DG LRICF RKNKTL S F +K V ++E+N+ T ++ Q
Sbjct: 241 RPDISWEELDGMLRICFNRKNKTLRSSFFVKQVRELIERNWVTWASMFPDQVKK------ 294
Query: 275 GTDTPSLGDSNGDQSMGVDDGSDD---EMDVEDDDGDSDVE------------------- 312
D++ Q +G D D E+D EDD+ + D +
Sbjct: 295 -------EDTDFLQGIG-DIALPDVVMEIDGEDDNNNKDTQLDDEDDMMQDMQDMIFGTS 346
Query: 313 -------GEVSEFKDKVLAV---------------------LREGQFEEKRASKLTQQEF 344
+ + K ++V L + +KR+ K + F
Sbjct: 347 TTAEKQKKDAPKLSGKTISVNGISVDRGRLVQLIQLKIQRALDKFGLSDKRSQKCDETSF 406
Query: 345 LYLLSLFNKAGIHFS 359
L LL FN+ GI FS
Sbjct: 407 LQLLHAFNQEGIRFS 421
>gi|212543995|ref|XP_002152152.1| dimethyladenosine transferase [Talaromyces marneffei ATCC 18224]
gi|210067059|gb|EEA21152.1| dimethyladenosine transferase [Talaromyces marneffei ATCC 18224]
Length = 401
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 154/381 (40%), Positives = 206/381 (54%), Gaps = 65/381 (17%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ GQHILKNP + ++IV KA IK +V+ GPGTG LT+++L K A+ELD R
Sbjct: 35 FNTDIGQHILKNPGIADAIVDKANIKEHEVV---GPGTGVLTRRILAKAKSCTAIELDPR 91
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLP---YFDICVANIPYQISSPLTFKLLFHQP 146
M EL + Q TP +L++I GD +K DL +FD+ ++N PYQISSPL FKLL
Sbjct: 92 MAAELTKMVQGTPMQKKLRIILGDFIKVDLKEIGHFDVFISNTPYQISSPLVFKLLAMPR 151
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
R +++M Q+EFA RL+A+PGD +Y RLSVN Q HA SH+LKVGKNNF PPP+V+SSV
Sbjct: 152 PPRVSVLMVQREFAQRLIARPGDAMYSRLSVNAQFHAICSHILKVGKNNFSPPPQVESSV 211
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
V+IEPR RP ++ E DG LRICF RKNKTL S F +K V ++E+N+ T ++ Q
Sbjct: 212 VKIEPRPDRPDISWEELDGMLRICFNRKNKTLRSSFFVKQVRELIERNWVTWASMFPDQV 271
Query: 267 SS--------LGNTEIGTDTPSLGDSNGDQSMGVDDGSDD-------------------- 298
+G E+ D SM VD DD
Sbjct: 272 KKEDMDFLQGIGGAEV-----------LDVSMEVDGEEDDNNQTLQLEGDDDDMMQDMQD 320
Query: 299 --------EMDVEDD-----------DGDSDVEGEVSEF-KDKVLAVLREGQFEEKRASK 338
E + D +G S G + + + K+ L + +KR+ K
Sbjct: 321 MIFGTSTSEKTTKKDAPKLSGKTISINGISVDRGRLIQLIQIKIQRALDKFGLSDKRSQK 380
Query: 339 LTQQEFLYLLSLFNKAGIHFS 359
+ FL LL FN+ GI FS
Sbjct: 381 CDETTFLQLLHAFNQEGIRFS 401
>gi|156102204|ref|XP_001616795.1| dimethyladenosine transferase [Plasmodium vivax Sal-1]
gi|148805669|gb|EDL47068.1| dimethyladenosine transferase, putative [Plasmodium vivax]
Length = 417
Score = 250 bits (638), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 126/259 (48%), Positives = 172/259 (66%), Gaps = 12/259 (4%)
Query: 11 GKQKSGPYQGQGLGAGGIS-----------FHKSKGQHILKNPLLVESIVQKAGIKSTDV 59
GK+KS P G S +K GQH+LKNP +++ I+ A IKS+DV
Sbjct: 50 GKKKSAPQGGNASRHISTSKPKSGNKMNMILYKKHGQHLLKNPGILDKILLAAKIKSSDV 109
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIG GTGNLT KLL K VI +++D+RMV E+++R Y+N L+V +GD +KT
Sbjct: 110 VLEIGCGTGNLTVKLLPIAKKVITIDIDARMVSEVKKRCLYEGYNN-LEVYEGDAIKTVF 168
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P FDIC ANIPY+ISSPL FKL+ H+P F+CA++MFQKEFA R++A GD Y RL+VN
Sbjct: 169 PRFDICTANIPYKISSPLIFKLIAHRPLFKCAVLMFQKEFADRMLANVGDSNYSRLTVNV 228
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
+L +V + V +++F PPPKVDS ++++ P++ +N EWD LRICF RK KTL
Sbjct: 229 KLFCKVVKICNVDRSSFNPPPKVDSVILKLIPKENNFFINFDEWDNLLRICFSRKRKTLH 288
Query: 240 SIFRLKNVLSMLEKNYRTL 258
+IF+ VL+MLE NY+
Sbjct: 289 AIFKRNAVLNMLEHNYKNF 307
>gi|225680654|gb|EEH18938.1| dimethyladenosine transferase [Paracoccidioides brasiliensis Pb03]
Length = 291
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/292 (47%), Positives = 182/292 (62%), Gaps = 23/292 (7%)
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M E+ +R Q P RL+V+ GDV+KTDLPYFD+C++N PYQISSPLTFKLL PA R
Sbjct: 1 MAAEVTKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQISSPLTFKLLATNPAPR 60
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
I+MFQ+EFAMRL A+PGDKLY RLSVN Q+ AR+ H++KVGKNNF+PPP V+SSVVRI
Sbjct: 61 VCILMFQREFAMRLFAKPGDKLYNRLSVNAQMWARIDHIMKVGKNNFKPPPAVESSVVRI 120
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSS 268
P+ PRPQ++ EWDG LRI F+RKNKT+ SS +VL MLE NYRT A Q++
Sbjct: 121 VPKNPRPQISYDEWDGLLRIAFVRKNKTIRSSFLGTTSVLDMLESNYRTWCA-QNNIPVE 179
Query: 269 LGNTEIGTDTP-SLGDSNGDQSMGVD------------------DGSDDEMDVEDDDGDS 309
G E P ++ + G+ G+D D +V+ ++
Sbjct: 180 DGPAEDSESEPMNIVEDQGEPDEGLDGTMDVDDDDDMDVHEFFADEPKLNSNVQKENPGR 239
Query: 310 DVEGEVSEF-KDKVLAVLREGQ-FEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+G+V E ++KV VL + +KRA + +FL LL FN GIHFS
Sbjct: 240 KKKGKVRELVREKVRQVLEDDTGLADKRARMCDEGDFLKLLWAFNLKGIHFS 291
>gi|300707711|ref|XP_002996053.1| hypothetical protein NCER_100912 [Nosema ceranae BRL01]
gi|239605315|gb|EEQ82382.1| hypothetical protein NCER_100912 [Nosema ceranae BRL01]
Length = 278
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/258 (49%), Positives = 177/258 (68%), Gaps = 12/258 (4%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+K GQHILKN +++I++KA IK TDVILEIG GTGNLT K++ K +I E+D R
Sbjct: 6 FNKDLGQHILKNMGAIDTILEKAKIKPTDVILEIGGGTGNLTLKMIPKCKKLICYEMDPR 65
Query: 90 MVLELQRRFQST-PYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
+ EL ++ + Y+N+ ++ GD +K D PYFD+C++N+PYQISSP FKLL + F
Sbjct: 66 LASELVKKINANREYANKFQLFIGDAMKHDFPYFDMCISNLPYQISSPFIFKLLTYN--F 123
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
+CA IMFQKEFA RL+A+PG + YCRLSV+ QL A+V H+LK+ KN+F PPPKV+S+VVR
Sbjct: 124 KCAYIMFQKEFADRLIARPGSQDYCRLSVSVQLLAQVDHILKIKKNSFVPPPKVESAVVR 183
Query: 209 IEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYR---------TLQ 259
IEP+ P+P +N ++D L+ICF+RKNKTL + FR + L+ R +
Sbjct: 184 IEPKIPKPVINFEDFDALLKICFLRKNKTLLANFRGSAFMKTLKTKKRLEIDEGEKLIKE 243
Query: 260 ALQSSQNSSLGNTEIGTD 277
LQ+ SS T++ TD
Sbjct: 244 ILQNLDFSSKRATKMDTD 261
>gi|393911742|gb|EJD76436.1| dimethyladenosine transferase, variant [Loa loa]
Length = 302
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 162/223 (72%), Gaps = 4/223 (1%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K K K+K+ P + A + F+ +GQHILKNP +V +IV+K+ IK+TD + E+G GT
Sbjct: 3 KVKLKKKNTPKTNNSMQA--LPFNTGRGQHILKNPGVVNAIVEKSAIKATDTVFEVGSGT 60
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GNLT L+E K VIA E+D RM+ EL++R T + +L++ QGDV+K + P+FD+C+A
Sbjct: 61 GNLTVVLMEKAKKVIACEIDRRMIAELKKRVIGTSHQQKLEMKQGDVIKMEWPFFDVCIA 120
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PYQISSP F++L +P R A++MFQKEFA RL+A+PG KLYCRLSVN Q A+V H
Sbjct: 121 NLPYQISSPFVFRMLLQRPLPRYAVLMFQKEFADRLLAKPGSKLYCRLSVNVQFLAQVEH 180
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC 230
L+KV + FRPPPKVDS+VVRI PR P PQ+N + D FL IC
Sbjct: 181 LMKVKRTEFRPPPKVDSAVVRIAPRNPPPQIN-FQVDSFL-IC 221
>gi|19074123|ref|NP_584729.1| DIMETHYLADENOSINE TRANSFERASE [Encephalitozoon cuniculi GB-M1]
gi|19068765|emb|CAD25233.1| DIMETHYLADENOSINE TRANSFERASE [Encephalitozoon cuniculi GB-M1]
gi|449328998|gb|AGE95273.1| dimethyladenosine transferase [Encephalitozoon cuniculi]
Length = 277
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/226 (52%), Positives = 166/226 (73%), Gaps = 3/226 (1%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+K GQHILKN ++++I+++A IK TD +LE+G GTGNLT KLL+ K V+ E+D R
Sbjct: 6 FNKQHGQHILKNLGVIDTIIERARIKPTDTVLEVGGGTGNLTMKLLQKAKKVVCYEIDPR 65
Query: 90 MVLELQRRFQSTP-YSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
+ EL ++ TP + + ++ GD LK D P+FD+C+ N+PYQISSP FKLL + F
Sbjct: 66 LAAELAKKVNGTPGMAQKFQLFVGDALKHDFPHFDLCITNLPYQISSPFVFKLLKYD--F 123
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
+CA IMFQKEF+ RLVA+PG YCRLSV Q+ A++ H+LKV KN+F PPPKV+SS VR
Sbjct: 124 KCAFIMFQKEFSDRLVARPGSPEYCRLSVGAQILAQIDHVLKVSKNSFVPPPKVESSFVR 183
Query: 209 IEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN 254
IEPR PRP ++ E+D FL+ICF+RKNKTL + F+ +++S ++ +
Sbjct: 184 IEPRIPRPPIDLGEFDRFLKICFLRKNKTLRANFKNSSLVSKIKND 229
>gi|396081192|gb|AFN82810.1| dimethyladenosine transferase [Encephalitozoon romaleae SJ-2008]
Length = 277
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 160/215 (74%), Gaps = 3/215 (1%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+K GQHILKN ++++I+++A IK TDV+LE+G GTGNLT KLL+ K VI E+D R
Sbjct: 6 FNKQHGQHILKNLGVIDTIIERARIKPTDVVLEVGGGTGNLTMKLLQKAKKVICYEIDPR 65
Query: 90 MVLELQRRFQSTP-YSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
+ EL +R P + + ++ GD LK D P+FD+C+ N+PYQISSP FKLL + F
Sbjct: 66 LAAELAKRVNGVPGMAQKFQLFVGDALKHDFPHFDLCITNLPYQISSPFMFKLLKYN--F 123
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
+CA IMFQ+EF+ RLVA+PG+ YCRLSV Q+ A++ H+LKV KN+F PPPKV+SS VR
Sbjct: 124 KCAYIMFQREFSDRLVARPGNPEYCRLSVGAQMLAQIDHVLKVSKNSFVPPPKVESSFVR 183
Query: 209 IEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
IEPR PRP ++ E+D FL+ICF+RKNKTL + F+
Sbjct: 184 IEPRIPRPPIDFEEFDRFLKICFLRKNKTLRANFK 218
>gi|154310501|ref|XP_001554582.1| hypothetical protein BC1G_07171 [Botryotinia fuckeliana B05.10]
Length = 214
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 150/212 (70%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVI 60
M K K PY+ +K GQHILKNP + E+IV+KA +K TD +
Sbjct: 1 MPKAKTGKRNAAAAGTPYEKAAALTNSFKHNKDYGQHILKNPGVAEAIVKKANLKPTDTV 60
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
LE+GPGTGNLT ++LE+ K VIAVE+D RM E+ +R Q P RL+V+ GDV+KT+LP
Sbjct: 61 LEVGPGTGNLTVRILESAKKVIAVEVDPRMAAEVTKRVQGKPEQKRLEVLLGDVIKTELP 120
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
+FD+C++N PYQISSPL FKLL RC+++MFQ+EFA+RL A+PGD LYCRLSVN Q
Sbjct: 121 HFDVCISNTPYQISSPLVFKLLSLPNPPRCSVVMFQREFALRLTARPGDSLYCRLSVNAQ 180
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR 212
A+++ ++KVGKNNFRPPP+ +S V RIEP+
Sbjct: 181 FFAKITPIMKVGKNNFRPPPQGESCVGRIEPK 212
>gi|449688278|ref|XP_002166686.2| PREDICTED: probable dimethyladenosine transferase-like, partial
[Hydra magnipapillata]
Length = 220
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/222 (54%), Positives = 156/222 (70%), Gaps = 8/222 (3%)
Query: 102 PYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAM 161
P +N+L +I GDVLK++LPYFD CVAN+PYQISSP FKLL H+P FRCA++MFQ+EFA
Sbjct: 1 PEANKLHLIVGDVLKSELPYFDCCVANLPYQISSPFVFKLLLHRPFFRCAVLMFQREFAQ 60
Query: 162 RLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPV 221
RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P P +N
Sbjct: 61 RLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPPPINFQ 120
Query: 222 EWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYR---TLQALQSSQNSSLGNTEIGTDT 278
EWDG +RI F+RKNKTL++ F K V+ MLEKNY+ ++ + N ++ +
Sbjct: 121 EWDGLVRIAFVRKNKTLAACFSSKAVIDMLEKNYKIHCSINNIIVEDNFNIKEKVLELLV 180
Query: 279 PSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKD 320
D ++M +DD +ED D++G++ D
Sbjct: 181 EKEFDKKRARTMDIDD-----FLLEDLKELRDIQGQIQGHAD 217
>gi|221485301|gb|EEE23582.1| dimethyladenosine transferase, putative [Toxoplasma gondii GT1]
Length = 494
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 188/332 (56%), Gaps = 48/332 (14%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ K GQH+LKN +++ IVQ A I+S+D +LEIGPGTGNLT +LL + V+A+++
Sbjct: 167 GLPLQKKFGQHLLKNQAVLDKIVQAADIRSSDTVLEIGPGTGNLTMRLLPVAREVVALDV 226
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D+RMV E+++R S + N L V GD L++DL FD+C AN+PYQISS +LL H+P
Sbjct: 227 DARMVNEVKKRAISNGFMN-LAVRHGDALRSDLGVFDVCAANLPYQISSHFLLRLLAHRP 285
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQKEF RL+AQPGDK YCRL+ N L V + KV +F PPPKVDS V
Sbjct: 286 PFRCAVLMFQKEFGERLMAQPGDKNYCRLAANVSLFCTVQRVCKVDAKHFTPPPKVDSVV 345
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
V++ PR V+ EWDG +RICF RKN+TL ++FR ++LSMLE NY+T L
Sbjct: 346 VKVVPRPNLIDVDFKEWDGLMRICFGRKNRTLHALFRRASILSMLEANYKTWCTLNKCAP 405
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
+S F++ L VL
Sbjct: 406 TS-----------------------------------------------QPFREFCLGVL 418
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
++R+ + + LL FNK GIHF
Sbjct: 419 SATGLGDRRSVTIDIDTYFSLLLAFNKKGIHF 450
>gi|237835739|ref|XP_002367167.1| dimethyladenosine transferase, putative [Toxoplasma gondii ME49]
gi|211964831|gb|EEB00027.1| dimethyladenosine transferase, putative [Toxoplasma gondii ME49]
gi|221506158|gb|EEE31793.1| dimethyladenosine transferase, putative [Toxoplasma gondii VEG]
Length = 494
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/332 (41%), Positives = 188/332 (56%), Gaps = 48/332 (14%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ K GQH+LKN +++ IVQ A I+S+D +LEIGPGTGNLT +LL + V+A+++
Sbjct: 167 GLPLQKKFGQHLLKNQAVLDKIVQAADIRSSDTVLEIGPGTGNLTMRLLPVAREVVALDV 226
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D+RMV E+++R S + N L V GD L++DL FD+C AN+PYQISS +LL H+P
Sbjct: 227 DARMVNEVKKRAISNGFMN-LAVRHGDALRSDLGVFDVCAANLPYQISSHFLLRLLAHRP 285
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FRCA++MFQKEF RL+AQPGDK YCRL+ N L V + KV +F PPPKVDS V
Sbjct: 286 PFRCAVLMFQKEFGERLMAQPGDKNYCRLAANVSLFCTVQRVCKVDAKHFTPPPKVDSVV 345
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
V++ PR V+ EWDG +RICF RKN+TL ++FR ++LSMLE NY+T L
Sbjct: 346 VKVVPRPNLIDVDFKEWDGLMRICFGRKNRTLHALFRRASILSMLEANYKTWCTLNKCAP 405
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
+S F++ L VL
Sbjct: 406 TS-----------------------------------------------QPFREFCLGVL 418
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
++R+ + + LL FNK GIHF
Sbjct: 419 SATGLGDRRSVTIDIDTYFSLLLAFNKKGIHF 450
>gi|402584543|gb|EJW78484.1| hypothetical protein WUBG_10607, partial [Wuchereria bancrofti]
Length = 198
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 147/192 (76%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
+ F+ +GQHILKNP ++ +IV+K+ IK+TD + E+G GTGNLT LL K VIA E+D
Sbjct: 1 LPFNTDRGQHILKNPGIINAIVEKSAIKATDTVFEVGSGTGNLTVALLGKAKKVIACEID 60
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPA 147
RM+ EL++R T +L+V QGDV+KT+ P+FD+CVAN+PYQISSP FKLL +P
Sbjct: 61 QRMIAELKKRVIGTSSQQKLEVRQGDVIKTEWPFFDVCVANLPYQISSPFVFKLLLQRPL 120
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
R A++MFQKEFA RL+A+PG+KLYCRLSVN Q A+V HL+KV + FRPPPKVDS+VV
Sbjct: 121 PRYAVLMFQKEFADRLLAKPGNKLYCRLSVNVQFLAQVEHLMKVKRTEFRPPPKVDSAVV 180
Query: 208 RIEPRKPRPQVN 219
RI PR P P++N
Sbjct: 181 RIAPRNPPPKIN 192
>gi|71028934|ref|XP_764110.1| dimethyladenosine transferase [Theileria parva strain Muguga]
gi|68351064|gb|EAN31827.1| dimethyladenosine transferase, putative [Theileria parva]
Length = 388
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 208/390 (53%), Gaps = 85/390 (21%)
Query: 7 RKEKGKQKSGPYQGQGLG--------------------------AGGISFHKSKGQHILK 40
R+ K K ++ PY+ LG G+ F K GQH+LK
Sbjct: 21 RRTKTKLRAEPYRTCPLGPRNLKVHPASSGPPSTHNIETKSYSSGSGMIFVKKYGQHMLK 80
Query: 41 NPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQS 100
NP +++ I++ A I+ TD +LEIGPGTGN T +L+ K V+A+++D+RM+ E++ R
Sbjct: 81 NPGVLDKIIKAAEIRPTDTVLEIGPGTGNWTVRLVTLAKKVVAIDVDARMISEVKNRCFQ 140
Query: 101 TPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR----------- 149
Y+N L+VI+ D L+T P FDIC+AN+P+QISSP FKLL H+P FR
Sbjct: 141 LGYTN-LEVIEADALRTTFPKFDICMANLPFQISSPFIFKLLSHRPLFRYLFHYYYFALE 199
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
AI++FQKEFA RL+A D Y RL++NT+L V+ + KV +F PPPKV+S VV+I
Sbjct: 200 SAILVFQKEFAERLLASTNDDKYGRLAINTRLFCTVTRICKVSAGSFNPPPKVESMVVKI 259
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
PR+ V+ EWDG +RICF RK +TL S+F+ ++VLS+LE NY++ +
Sbjct: 260 VPREQPLVVDFGEWDGMIRICFSRKRRTLRSLFKKQSVLSILESNYKSWCTI-------- 311
Query: 270 GNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREG 329
N ++ P FK+ V+ +L
Sbjct: 312 -NNKVPVVKP--------------------------------------FKEFVIEILEGS 332
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
E+R+ ++ EFL LL FN+ GIHF
Sbjct: 333 GLAERRSITVSIAEFLKLLLAFNEVGIHFC 362
>gi|46121341|ref|XP_385225.1| hypothetical protein FG05049.1 [Gibberella zeae PH-1]
Length = 346
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 203/360 (56%), Gaps = 23/360 (6%)
Query: 7 RKEKGKQ---KSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEI 63
+ KGK + GPY+ F+ + GQHILKNP + ++IV KA +K TD +LEI
Sbjct: 3 KATKGKNAGPRKGPYEKPA-ANRVFKFNTNIGQHILKNPGIADTIVAKAYLKPTDTVLEI 61
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD----L 119
GPGTG LT ++LE K V AVELD+RM EL +R Q P +L++I GD K D L
Sbjct: 62 GPGTGVLTTRILEQAKAVKAVELDTRMAAELTKRVQGGPLQQKLEIIMGDFAKLDVVQAL 121
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P D+C++N PYQISS + KL+ R +I+M Q+EF +RL A+ GD LY RLSVNT
Sbjct: 122 PPIDVCISNTPYQISSIIVSKLISMPKPPRVSILMVQREFGLRLCARAGDSLYSRLSVNT 181
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
Q ++VS + KVGKNNF PPP+V+S VVRIEPR P V E DG LRICF RKNKTL
Sbjct: 182 QFTSKVSMVAKVGKNNFSPPPEVESVVVRIEPRTDVPAVGLEELDGVLRICFSRKNKTLR 241
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
+ F + + E+N+ T ++ + S + ++ D+ + D V +
Sbjct: 242 ASFL--DSHEICERNWITWTSMYPDKVSE-KDLDLLRDSMDTAEKAADSKQSVCGVPVSK 298
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+++ + K+ VL + E RA K + +FL L+ F + I+F+
Sbjct: 299 ASLKN------------LIRTKIEHVLETTELAEARAVKCDENDFLKLILAFRENNIYFT 346
>gi|302421778|ref|XP_003008719.1| dimethyladenosine transferase [Verticillium albo-atrum VaMs.102]
gi|261351865|gb|EEY14293.1| dimethyladenosine transferase [Verticillium albo-atrum VaMs.102]
Length = 346
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/383 (39%), Positives = 204/383 (53%), Gaps = 68/383 (17%)
Query: 3 GGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
GGK + S PY F+ + GQHILKNP + ++IV KAG+K TD +LE
Sbjct: 6 GGK--RNSSAAGSSPYAKPQKSNNVFKFNTNVGQHILKNPGVADAIVAKAGLKPTDTVLE 63
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF 122
IGPGTGNLT ++LE K +IA+E D RM E+ +R Q TP +L+V+ GD +K D F
Sbjct: 64 IGPGTGNLTVRILENAKKLIAIEFDPRMAAEVTKRVQGTPEQRKLEVMLGDAIKVDWVPF 123
Query: 123 DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
D+ ++N PYQISSPL FK+L R AI+MFQ EF RLVA+PGDKLY RLSVN
Sbjct: 124 DVLISNTPYQISSPLVFKMLAMPKPPRQAILMFQLEFGQRLVAKPGDKLYGRLSVNANFW 183
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSS 240
A S+++KV K NFRPPP+VDS VVRI P++ RP + E+DG LRI
Sbjct: 184 ATCSNVMKVSKANFRPPPQVDSCVVRIVPKQGSERPNIAFEEFDGLLRI----------- 232
Query: 241 IFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM 300
NYR A+ + +L DS ++ G DD +D+EM
Sbjct: 233 -------------NYRVWAAMNNV---------------ALDDSLVEEEEG-DDAADEEM 263
Query: 301 DVEDDDGDSDVEGEVSEF------------------------KDKVLAVLREGQFEEKRA 336
D++D+ + D +G F + K+ + L + + EKRA
Sbjct: 264 DLDDEAAEQDDDGATDFFAALKPAEVEKTKSKRKKTKVAALVRHKIESALEKTELLEKRA 323
Query: 337 SKLTQQEFLYLLSLFNKAGIHFS 359
+ + +FL LL N GIHF+
Sbjct: 324 RQCDETDFLKLLHALNSEGIHFA 346
>gi|408395728|gb|EKJ74904.1| hypothetical protein FPSE_04940 [Fusarium pseudograminearum CS3096]
Length = 346
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 201/360 (55%), Gaps = 23/360 (6%)
Query: 7 RKEKGKQ---KSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEI 63
+ KGK + GPY+ F+ + GQHILKNP + ++IV KA +K TD +LEI
Sbjct: 3 KATKGKNAGPRKGPYEKPA-ANRVFKFNTNIGQHILKNPGIADTIVAKAYLKPTDTVLEI 61
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD----L 119
GPGTG LT ++LE K V AVELD+RM EL +R Q P +L++I GD K D L
Sbjct: 62 GPGTGVLTTRILEQAKAVKAVELDTRMAAELTKRVQGGPLQQKLEIIMGDFAKLDIVQAL 121
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P D+C++N PYQISS + KL+ R +I+M Q+EF +RL A+ GD LY RLSVNT
Sbjct: 122 PPIDVCISNTPYQISSIIVSKLISMPKPPRVSILMVQREFGLRLCARAGDSLYSRLSVNT 181
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLS 239
Q ++VS + KVGKNNF PPP+V+S VVRIEPR P V E DG LRICF RKNKTL
Sbjct: 182 QFTSKVSMVAKVGKNNFSPPPEVESVVVRIEPRTDVPAVGLEELDGVLRICFSRKNKTLR 241
Query: 240 SIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDE 299
+ F + + E+N+ T ++ + S D L DS D + V D
Sbjct: 242 ASFL--DSHEICERNWITWTSMYPDKVSE-------KDLDLLRDS-MDTAEKVSDSKQSV 291
Query: 300 MDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
V + + K+ VL + E RA K + +FL L+ F + I+F+
Sbjct: 292 CGVPVSKASLK-----NLIRTKIEHVLETTELAEARAVKCDENDFLKLILAFRENNIYFT 346
>gi|356538250|ref|XP_003537617.1| PREDICTED: probable dimethyladenosine transferase-like [Glycine
max]
Length = 341
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 206/343 (60%), Gaps = 42/343 (12%)
Query: 19 QGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG 78
G G G + FHKS+GQHIL NP ++++IV+++ I TD +LEIGPGTGNLT KLLEA
Sbjct: 23 HGDGDGEEALRFHKSRGQHILINPRILDTIVRRSAINPTDTVLEIGPGTGNLTLKLLEAA 82
Query: 79 KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLT 138
V+A+E+D RMV L++R ++L+VI+ D ++ P FD+ VANIPY+ISSPL
Sbjct: 83 HKVVAIEIDHRMVQVLEKRVLQRGLKDKLRVIERDAMRAPFPRFDLVVANIPYRISSPLV 142
Query: 139 FKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDK-LYCRLSVNTQLHARVSHLLKVGKNNFR 197
KL++ FR A ++ QKEFA RL+A PGD + RLS N +L A V ++ V K +F
Sbjct: 143 IKLVYGATPFRSATLLLQKEFARRLLACPGDSGGFNRLSANVKLVADVELVMDVSKRDFL 202
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICF-IRKNKTLSSIFRLKNVLSMLEKNYR 256
P PKVDSSVV I P+ P V+ EW F R CF +NKTL ++F+LK + L K
Sbjct: 203 PSPKVDSSVVIIRPKHQIPNVDLHEWRSFTRTCFSSNRNKTLGALFKLKGKVFELFKI-- 260
Query: 257 TLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVS 316
SNG+ + G +V+D EG ++
Sbjct: 261 ---------------------------SNGNDECSLHKGD----EVQD-------EGGLT 282
Query: 317 EFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
FK+K++ V+R G FE+KR +KL+ QE L+LLSLFN+AGI+F+
Sbjct: 283 SFKEKIIGVVRTGGFEDKRPAKLSLQELLHLLSLFNQAGIYFN 325
>gi|115400783|ref|XP_001215980.1| hypothetical protein ATEG_06802 [Aspergillus terreus NIH2624]
gi|114191646|gb|EAU33346.1| hypothetical protein ATEG_06802 [Aspergillus terreus NIH2624]
Length = 287
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/314 (44%), Positives = 180/314 (57%), Gaps = 71/314 (22%)
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
M E+ +R Q TP RL VI GD +KT+LPYFD+C++N PYQISSPLTFKLL PA R
Sbjct: 1 MAAEVTKRVQGTPAQKRLDVILGDFMKTELPYFDVCISNTPYQISSPLTFKLLATTPAPR 60
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
I+MFQ+EFA+RL A+PGDKLY RLSVN Q+ A++ H++KVGKNNF+PPP VDSSVVR+
Sbjct: 61 VCILMFQREFALRLFAKPGDKLYSRLSVNAQMWAKIDHIMKVGKNNFKPPPLVDSSVVRL 120
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQSSQNSS 268
P+ PRPQ+N EWDG LRICF+RKNKT+ S F K+ V+ +LE NYRT A QN
Sbjct: 121 VPKNPRPQINYEEWDGLLRICFVRKNKTIRSSFLGKHTVMDLLEANYRTWCA----QN-- 174
Query: 269 LGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDV----------------- 311
D P V+DG D+ D E D G++
Sbjct: 175 --------DIP------------VEDGPADD-DTEMDTGNAQDDEDMEPEDDMDMDEDDV 213
Query: 312 ------------------------EGEVSEF-KDKVLAVLREGQ-FEEKRASKLTQQEFL 345
+G+V+E ++KV VL + +KRA + +FL
Sbjct: 214 PDFFKEQANARVQEALKNRPARKKKGKVAELVREKVRQVLEDDTGLADKRARMCDENDFL 273
Query: 346 YLLSLFNKAGIHFS 359
LL FN+ G HF+
Sbjct: 274 KLLWAFNQKGFHFN 287
>gi|342888753|gb|EGU87972.1| hypothetical protein FOXB_01455 [Fusarium oxysporum Fo5176]
Length = 343
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 200/356 (56%), Gaps = 27/356 (7%)
Query: 10 KGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGN 69
+G + GPY ++ + GQHILKNP + + IV KA +K TD +LEIGPGTG
Sbjct: 9 RGGARKGPYDKPEARKSIFKYNTNIGQHILKNPGIADMIVAKANLKPTDTVLEIGPGTGV 68
Query: 70 LTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY----FDIC 125
LT ++LE K V AVELD RM EL +R Q P +L++I GD K DLP FD+C
Sbjct: 69 LTTRILEQAKAVKAVELDIRMGTELTKRVQGKPEQQKLEIIMGDFAKLDLPEALPPFDVC 128
Query: 126 VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARV 185
++N PYQISS + KL+ R +I+M Q+EF +RL A+PGD LY RLSVNTQ ++V
Sbjct: 129 ISNTPYQISSIIISKLISLPRPPRVSILMVQREFGLRLCARPGDSLYSRLSVNTQFTSKV 188
Query: 186 SHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLK 245
+ + KVGKNNF PPP+V+S VVR+EPR P N E DG LRICF RKNKTL + F
Sbjct: 189 ALIAKVGKNNFSPPPEVESVVVRLEPRPEVPAANIQELDGMLRICFSRKNKTLRASF--I 246
Query: 246 NVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDD 305
+ + ++N+ T A+ + S +Q + S+D +D
Sbjct: 247 DSEELCQRNWITWAAMDPEKVS-------------------EQDLQFFRDSEDTIDAHQS 287
Query: 306 DGDSDVEGEV--SEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
V S + K+ VL + + E R++K + +FL LL F + I+F+
Sbjct: 288 VCGIPVSKATLKSFIRSKIEHVLEKTELSEARSAKCDENDFLRLLLAFRENNIYFT 343
>gi|429965694|gb|ELA47691.1| dimethyladenosine transferase [Vavraia culicis 'floridensis']
Length = 266
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 164/245 (66%), Gaps = 2/245 (0%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
I + K GQHILKNP ++++I+++A I TD +LEIG GTGNLT KLL K VI E
Sbjct: 2 SIRYKKDLGQHILKNPGIIDTIIERANILETDTVLEIGSGTGNLTIKLLAKAKRVICYEK 61
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RM EL +R +S +++K+ GD +K+D P+FD+CV+NIPYQISS L FKL +
Sbjct: 62 DERMAAELVKRVKSLNLCHKMKLFVGDCMKSDFPHFDLCVSNIPYQISSVLIFKLFGYN- 120
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FR A++M Q EFA+RLVA PG+ Y RLSV+ QL ++V ++ KV + NF P PKV+S+V
Sbjct: 121 -FRAAVLMLQHEFALRLVANPGNPDYSRLSVSAQLFSKVEYMFKVSRKNFNPMPKVESAV 179
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
VRI R +P +N E+ FLRICF RKNKTLS +F K+V+ ++K R + + S
Sbjct: 180 VRIRKRLEQPSINIEEFANFLRICFKRKNKTLSGVFGDKSVIKTVKKEKREIAEILSVYG 239
Query: 267 SSLGN 271
+ N
Sbjct: 240 TKRAN 244
>gi|78499686|gb|ABB45840.1| hypothetical protein [Eutrema halophilum]
Length = 310
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 153/219 (69%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ HKSKGQH+L N ++++IV+ + ++ TD +LEIGPGTGNLT KLLEA + V+AVE+
Sbjct: 44 GLFLHKSKGQHLLTNNRILDAIVRISDVRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVEI 103
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV L +R ++L +IQ DVLKTD P FD+ VANIPY ISSPL KL++
Sbjct: 104 DKRMVEILGKRVADHGLEDKLTIIQKDVLKTDFPQFDLVVANIPYNISSPLVAKLVYGSN 163
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
AFR A ++ QKEF+ RL+A PGD + RL+VN +L A V ++ V K F PPPKVDSS+
Sbjct: 164 AFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVQFVMDVSKREFVPPPKVDSSL 223
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLK 245
V I P++ +P V+ EW F R CF KNKTL S+FR K
Sbjct: 224 VIIRPKEVKPDVDVQEWLAFTRTCFGNKNKTLGSMFRQK 262
>gi|320590414|gb|EFX02857.1| dimethyladenosine transferase [Grosmannia clavigera kw1407]
Length = 318
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 190/355 (53%), Gaps = 46/355 (12%)
Query: 7 RKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPG 66
R+ S PY G G +K ++ K V +Q G KS
Sbjct: 8 RRTGAASASSPYARPTTGKAG-----TKKNNVFKFNTNVGQALQMCG-KSRR-------- 53
Query: 67 TGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICV 126
TGN+T ++LE + IA+ELD RM E+ +R Q P +L+V+ GD +KT+ P FD+C+
Sbjct: 54 TGNITTRILEKARKCIAIELDPRMAAEVTKRVQGGPLQKKLEVLLGDAIKTEFPPFDVCI 113
Query: 127 ANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVS 186
+N PYQISSPL FKLL R A++MFQKEFA RLVA+PGD LYCRLSVN Q AR++
Sbjct: 114 SNTPYQISSPLVFKLLSLPNPPRTAVLMFQKEFAQRLVARPGDTLYCRLSVNAQFFARIA 173
Query: 187 HLLKVGKNNFRPPPKVDSSVVRIEPR--KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
H+LKVGK NF PPP+V+S+VVRI P+ RP+ N E DG LR+ F RKN+T+ + F
Sbjct: 174 HVLKVGKANFNPPPQVESAVVRITPKTGSERPKFNFSEMDGMLRVAFNRKNRTMRASFAS 233
Query: 245 KNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVED 304
K VL+ML +NYR +S+ + P + + VD+
Sbjct: 234 KEVLAMLARNYRVY--------ASINGIALDDSLPPAKTPSRRKRTKVDE---------- 275
Query: 305 DDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ KVL VL + ++R+ + + +FL LL N GI FS
Sbjct: 276 ------------LVRAKVLRVLERLEMADRRSRQCDEGDFLRLLDAMNSEGIRFS 318
>gi|440491620|gb|ELQ74243.1| Ribosomal RNA adenine dimethylase [Trachipleistophora hominis]
Length = 266
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/245 (48%), Positives = 161/245 (65%), Gaps = 2/245 (0%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
I + K GQHILKNP +++ I+++A I TD +LEIG GTGNLT KLL K VI E
Sbjct: 2 SIQYKKDLGQHILKNPGIIDRIIERANILETDTVLEIGSGTGNLTVKLLAKAKKVICYEK 61
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RM EL +R +S +++K+ GD +K+D P+FD+CV+NIPYQISS L FKL +
Sbjct: 62 DERMAAELVKRVKSLNMYHKMKLFVGDCMKSDFPHFDLCVSNIPYQISSVLIFKLFSYN- 120
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FR A +M Q EFAMRLVA+PG Y RLSV+TQL ++V ++ KV + NF P PKV+S+V
Sbjct: 121 -FRAAFLMLQHEFAMRLVARPGSPDYSRLSVSTQLFSKVEYMFKVSRKNFNPMPKVESAV 179
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
V+I R +P +N E+ FLRICF RKNKTL +F K+V+ + K R + + S+
Sbjct: 180 VKIRKRLEQPDINVEEFANFLRICFKRKNKTLGGVFGDKSVVKTVGKEKREIGEILSTYG 239
Query: 267 SSLGN 271
N
Sbjct: 240 VKRAN 244
>gi|125558476|gb|EAZ04012.1| hypothetical protein OsI_26151 [Oryza sativa Indica Group]
Length = 358
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 194/335 (57%), Gaps = 12/335 (3%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAV 84
G HK +GQH+L NP ++++IV++A ++ D +LE+GPGTGNLT +LLE+ V AV
Sbjct: 33 GRFRLHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAV 92
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E+D RMV + R + +++L VI+ D ++ + P FD+CVANIPY ISSPL KLLF
Sbjct: 93 EIDPRMVDAVTARVDALGLAHKLTVIRADAVEAEFPEFDVCVANIPYGISSPLIAKLLFG 152
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
FR A ++ QKEFA RLVA PGD Y RL+ N ++ A L+ V K +F P PKVDS
Sbjct: 153 PYRFRAATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVPMPKVDS 212
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQS 263
S+V I PR P V+ EW F R CF +KNKTL +IF+ K VL + ++ +
Sbjct: 213 SLVEIRPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQKRKVLELFRRS-------RC 265
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
++ GN G + + GD + DG +E D S E EV+ FK K+
Sbjct: 266 AEERCDGNANAGGGSRLIALGGGDDDGDMSDGDSNE---GHDGAPSFSEEEVAVFKAKIA 322
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
L + KR SKL+ E L LL L N+ G+ F
Sbjct: 323 GALETCELAGKRPSKLSNDELLRLLKLLNEQGVRF 357
>gi|125600382|gb|EAZ39958.1| hypothetical protein OsJ_24395 [Oryza sativa Japonica Group]
Length = 358
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 194/335 (57%), Gaps = 12/335 (3%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAV 84
G HK +GQH+L NP ++++IV++A ++ D +LE+GPGTGNLT +LLE+ V AV
Sbjct: 33 GRFRLHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAV 92
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E+D RMV + R + +++L VI+ D ++ + P FD+CVANIPY ISSPL KLLF
Sbjct: 93 EIDPRMVDAVTARVDALGLAHKLTVIRADAVEAEFPEFDVCVANIPYGISSPLIAKLLFG 152
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
FR A ++ QKEFA RLVA PGD Y RL+ N ++ A L+ V K +F P PKVDS
Sbjct: 153 PYRFRAATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVPMPKVDS 212
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQS 263
S+V I PR P V+ EW F R CF +KNKTL +IF+ K VL + ++ +
Sbjct: 213 SLVEIRPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQKRKVLELFRRS-------RC 265
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
++ GN G + + GD + DG +E D S E EV+ FK K+
Sbjct: 266 AEERCDGNANAGGGSRLIALGGGDDDGDMSDGDSNE---GHDGAPSFSEEEVAVFKAKIT 322
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
L + KR SKL+ E L LL L N+ G+ F
Sbjct: 323 GALESCELAGKRPSKLSNDELLRLLKLLNEQGVRF 357
>gi|115472299|ref|NP_001059748.1| Os07g0509600 [Oryza sativa Japonica Group]
gi|113611284|dbj|BAF21662.1| Os07g0509600, partial [Oryza sativa Japonica Group]
Length = 347
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/335 (42%), Positives = 194/335 (57%), Gaps = 12/335 (3%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAV 84
G HK +GQH+L NP ++++IV++A ++ D +LE+GPGTGNLT +LLE+ V AV
Sbjct: 22 GRFRLHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAV 81
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E+D RMV + R + +++L VI+ D ++ + P FD+CVANIPY ISSPL KLLF
Sbjct: 82 EIDPRMVDAVTARVDALGLAHKLTVIRADAVEAEFPEFDVCVANIPYGISSPLIAKLLFG 141
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
FR A ++ QKEFA RLVA PGD Y RL+ N ++ A L+ V K +F P PKVDS
Sbjct: 142 PYRFRAATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVPMPKVDS 201
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQS 263
S+V I PR P V+ EW F R CF +KNKTL +IF+ K VL + ++ +
Sbjct: 202 SLVEIRPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQKRKVLELFRRS-------RC 254
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVL 323
++ GN G + + GD + DG +E D S E EV+ FK K+
Sbjct: 255 AEERCDGNANAGGGSRLIALGGGDDDGDMSDGDSNE---GHDGAPSFSEEEVAVFKAKIT 311
Query: 324 AVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
L + KR SKL+ E L LL L N+ G+ F
Sbjct: 312 GALESCELAGKRPSKLSNDELLRLLKLLNEQGVRF 346
>gi|359476860|ref|XP_002267827.2| PREDICTED: dimethyladenosine transferase-like [Vitis vinifera]
Length = 355
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 192/337 (56%), Gaps = 45/337 (13%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
G + +KS GQHIL NP ++++IV+K+ IK TD +LEIGPGTGNLT +LL+A + V+A
Sbjct: 42 GEKHMFLYKSWGQHILTNPRVLDTIVRKSNIKPTDTVLEIGPGTGNLTLRLLQAAQRVVA 101
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
VELD+RMV L++R ++L VI D LKTD P FD+ VANIPY ISSPL KL+F
Sbjct: 102 VELDARMVEILRKRVAEHGLEDQLTVICKDALKTDFPQFDLVVANIPYGISSPLVAKLVF 161
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
FR A ++ QKEFA RL+A PGD + RL+VN
Sbjct: 162 GANPFRSATLLLQKEFARRLLANPGDSEFNRLAVN------------------------- 196
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
V+I P+ P V+ EW F R CF +KNKTL + F+ K + L L +
Sbjct: 197 ---VKIRPKAEVPDVDLNEWCAFTRTCFSKKNKTLGATFKHK-------RRVMELWRLSN 246
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSD--VEGEVSEFKDK 321
+ S GN G N D S D ++ + ++ +GD E E+S FK+K
Sbjct: 247 LRGSETGNAVSGC--------NYDCSYDEDKEEEEGNESDEGNGDPSPGSEMEMSLFKEK 298
Query: 322 VLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ VL+ G F++KR +KL+ +E L LLSLFN+AGIHF
Sbjct: 299 INGVLKLGGFDDKRPAKLSGKELLQLLSLFNQAGIHF 335
>gi|357122683|ref|XP_003563044.1| PREDICTED: dimethyladenosine transferase-like [Brachypodium
distachyon]
Length = 361
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 142/344 (41%), Positives = 197/344 (57%), Gaps = 30/344 (8%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAV 84
G HK +GQH+L NP ++++I + A ++ D +LE+GPGTGNLT +LL + V AV
Sbjct: 36 GRFRLHKPRGQHLLTNPRVLDAIARHAALRPGDAVLEVGPGTGNLTARLLASPAARVSAV 95
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E+D RMV + R + +++L VI GD ++TD P FD+CVANIPY ISSPL KLLF
Sbjct: 96 EIDPRMVDAVTARASALNLAHKLTVILGDAVETDFPEFDVCVANIPYGISSPLIAKLLFG 155
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
FR A ++ QKEFA RLVA+PGD Y RL+ N + A L+ V K +F P P+VDS
Sbjct: 156 TYRFRTATLLLQKEFARRLVAKPGDSEYNRLAANVHMVAETRLLMDVSKRDFVPMPRVDS 215
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQS 263
S+V I PR P+ + EW F R CF +KNKTL +IF+ K +L + ++++RT
Sbjct: 216 SLVEIRPRVDMPEADLAEWLAFTRECFGQKNKTLGAIFKQKRKILELFKRSHRT------ 269
Query: 264 SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEM----DVEDDDGDSDV-----EGE 314
D P G +GV D +DE D DD+G SDV + +
Sbjct: 270 --------KRCADDAPGRG-----VILGVLDDDNDEACSDDDGNDDNGRSDVVAGFNKED 316
Query: 315 VSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
V FK+++ L + KR S+L+ E L LL L N+ G+ F
Sbjct: 317 VGAFKERIANALESTELAGKRPSQLSNDELLRLLRLLNERGVWF 360
>gi|253745520|gb|EET01398.1| Dimethyladenosine transferase [Giardia intestinalis ATCC 50581]
Length = 319
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/239 (48%), Positives = 162/239 (67%), Gaps = 4/239 (1%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQH+L NPL+++SIV+KA I+STD +LEIGPGTGNLT LLE K VIA+E+
Sbjct: 3 GFELTKQHGQHLLANPLVIKSIVEKAEIRSTDTVLEIGPGTGNLTLALLEKAKHVIAIEI 62
Query: 87 DSRMVLELQRRFQSTP-YSNRLKVIQGDVLK---TDLPYFDICVANIPYQISSPLTFKLL 142
D RMV EL++R + P Y + +I D K T++P FD+CV+N PY ISS + F+LL
Sbjct: 63 DPRMVSELKKRIAAIPEYRGKFTIIHKDFTKMPATEIPTFDLCVSNCPYNISSGIVFRLL 122
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
QP R ++MFQ EFA RL A+PG Y RL+VNT+L ++ +++V +N+F+PPP V
Sbjct: 123 EIQPLPRKFVLMFQLEFAQRLAAEPGQDQYSRLTVNTKLLSKTKIIIRVSRNSFKPPPNV 182
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL 261
DS+VV + P P P ++ E++G RI F +KNKTL +IF+ K++L L N L+ +
Sbjct: 183 DSAVVEMYPIGPPPGLDLDEFNGLTRILFSKKNKTLGAIFKTKSLLDDLANNMVRLEEI 241
>gi|346969877|gb|EGY13329.1| dimethyladenosine transferase [Verticillium dahliae VdLs.17]
Length = 337
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 187/330 (56%), Gaps = 46/330 (13%)
Query: 51 KAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVI 110
KA +K TD +LEIGPGTGNLT ++LE K +IA+E D RM E
Sbjct: 33 KADLKPTDTVLEIGPGTGNLTVRILENAKKLIAIEFDPRMAAE----------------- 75
Query: 111 QGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDK 170
V K D FD+ ++N PYQISSPL FK+L R AI+MFQ EF RLVA+PGDK
Sbjct: 76 ---VTKVDWVPFDVLISNTPYQISSPLVFKMLAMPKPPRQAILMFQLEFGQRLVAKPGDK 132
Query: 171 LYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK--PRPQVNPVEWDGFLR 228
LY RLSVN A S+++KV K NFRPPP+VDS VVRI P++ RP + E+DG LR
Sbjct: 133 LYGRLSVNANFWATCSNVMKVSKANFRPPPQVDSCVVRIVPKQGSERPSIAFEEFDGLLR 192
Query: 229 ICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGD 287
ICF RKN+T+ +S K VLSMLEKNYR A+ N L ++ + + GD D
Sbjct: 193 ICFNRKNRTMRASWLGTKEVLSMLEKNYRVWAAM---NNVPLDDSLVEEEGEEAGDDAAD 249
Query: 288 QSMGVDDGSDDEMDVEDDDGDSD-------VEGE-----------VSEFKDKVLAVLREG 329
+ M +DD + ++ +DDDG +D E E + + K+ + L +
Sbjct: 250 EEMDLDDEAPEQE--QDDDGATDFFAALKPAEAEKTKSKRKKTKVAALVRHKIESALDKT 307
Query: 330 QFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+ EKRA + + +FL LL N GIHF+
Sbjct: 308 ELLEKRARQCDETDFLKLLHALNSEGIHFA 337
>gi|308160049|gb|EFO62557.1| Dimethyladenosine transferase [Giardia lamblia P15]
Length = 319
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 193/341 (56%), Gaps = 33/341 (9%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQH+L NPL+++SIV+KA I+STD +LEIGPGTGNLT LLE K VIAVE+
Sbjct: 3 GFELTKQHGQHLLANPLVIKSIVEKAEIRSTDTVLEIGPGTGNLTLALLEKAKHVIAVEI 62
Query: 87 DSRMVLELQRRFQSTP-YSNRLKVIQGDVLK---TDLPYFDICVANIPYQISSPLTFKLL 142
D RMV EL++R + P Y + VI D K ++P FD+CV+N PY ISS + F+LL
Sbjct: 63 DPRMVSELKKRIAAIPEYRGKFTVIHKDFTKMPPNEIPPFDLCVSNCPYNISSGIVFRLL 122
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
QP R ++MFQ EFA RL A+PG Y RL+VNT+L ++ +++V +N+F+PPP V
Sbjct: 123 EIQPLPRKFVLMFQLEFAQRLAAEPGQDQYSRLTVNTKLLSKTKIIIRVSRNSFKPPPNV 182
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL- 261
DS+VV + P P P ++ E++G RI F +KNKTL +IF+ +++L+ L N L +
Sbjct: 183 DSAVVEMYPVGPPPGLDLDEFNGLTRILFSKKNKTLGAIFKTRSLLNDLASNIARLDEIN 242
Query: 262 ---QSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEF 318
+ +Q ++ + S+G+S V V +
Sbjct: 243 RLHKPAQPHQYESSNLSHAASSIGNS------------------------PSVLTSV-QL 277
Query: 319 KDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
++++ L E + R + + + L L+ G+ F+
Sbjct: 278 RERIAEALTEANLTDTRPNHMAIPDLLSLMCALTAKGVRFT 318
>gi|207340778|gb|EDZ69021.1| YPL266Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 204
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 118/245 (48%), Positives = 155/245 (63%), Gaps = 41/245 (16%)
Query: 115 LKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCR 174
+KT+LPYFDIC++N PYQISSPL FKL+ R +I+MFQ+EFA+RL+A+PGD LYCR
Sbjct: 1 MKTELPYFDICISNTPYQISSPLVFKLINQPRPPRVSILMFQREFALRLLARPGDSLYCR 60
Query: 175 LSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRK 234
LS N Q+ A V+H++KVGKNNFRPPP+V+SSVVR+E + PRPQV+ EWDG LRI F+RK
Sbjct: 61 LSANVQMWANVTHIMKVGKNNFRPPPQVESSVVRLEIKNPRPQVDYNEWDGLLRIVFVRK 120
Query: 235 NKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDD 294
N+T+S+ F+ V+ +LEKNY+T A+ N E+ VDD
Sbjct: 121 NRTISAGFKSTTVMDILEKNYKTFLAM---------NNEM-----------------VDD 154
Query: 295 GSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKA 354
DV K+K+ VL+E +KRA K Q +FL LL F++
Sbjct: 155 TKGSMHDV---------------VKEKIDTVLKETDLGDKRAGKCDQNDFLRLLYAFHQV 199
Query: 355 GIHFS 359
GIHFS
Sbjct: 200 GIHFS 204
>gi|356495382|ref|XP_003516557.1| PREDICTED: probable dimethyladenosine transferase-like [Glycine
max]
Length = 345
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 142/335 (42%), Positives = 200/335 (59%), Gaps = 42/335 (12%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
+ F+KS+GQHI NP ++++I +++ I TD +LEIGPGTGNLT KLLEA V+A+E+
Sbjct: 35 ALRFYKSRGQHIFINPRILDTIFRRSAINPTDTVLEIGPGTGNLTLKLLEAAHKVVAIEI 94
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV L++R ++L+VI+ D ++ P FD+ VANIPY+ISSPL KL++
Sbjct: 95 DHRMVQVLEKRVLQRGLQDKLRVIERDAMRAPFPRFDLVVANIPYRISSPLVIKLVYGAT 154
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDK-LYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
FR A ++ QKEFA RL+ PGD + RLS N +L A V ++ V K +F P PKVDSS
Sbjct: 155 PFRSATLLLQKEFARRLLTCPGDSGGFNRLSANVKLVADVELVMDVSKRDFLPSPKVDSS 214
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICF-IRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
VV I P+ P V+ EW F R CF +NKTL ++F+LK + L K
Sbjct: 215 VVIIRPKPQIPNVDLHEWRAFTRTCFSSNRNKTLGALFKLKGKVFELFK----------- 263
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
S GN E +P GD + +D+ G ++ FK+K++
Sbjct: 264 --ISNGNDEC---SPHKGD-----------------EAQDERG-------LALFKEKIIG 294
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
V+ G FE+KR +KL+ QE L+LLSLFN+AGI+F+
Sbjct: 295 VVTSGGFEDKRPAKLSLQELLHLLSLFNQAGIYFN 329
>gi|159107917|ref|XP_001704233.1| Dimethyladenosine transferase [Giardia lamblia ATCC 50803]
gi|157432290|gb|EDO76559.1| Dimethyladenosine transferase [Giardia lamblia ATCC 50803]
Length = 316
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 160/236 (67%), Gaps = 4/236 (1%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQH+L NPL+++SIV+KA I+STD +LEIGPGTGNLT LLE + VIA+E+
Sbjct: 3 GFELTKQHGQHLLANPLVIKSIVEKAEIRSTDTVLEIGPGTGNLTLALLEKARHVIAIEI 62
Query: 87 DSRMVLELQRRFQSTP-YSNRLKVIQGDVLK---TDLPYFDICVANIPYQISSPLTFKLL 142
D RMV EL++R + P Y + +I D K +++P FD+CV+N PY ISS + F+LL
Sbjct: 63 DPRMVSELKKRIAAIPEYRGKFTIIHKDFTKMPPSEIPPFDLCVSNCPYNISSGIVFRLL 122
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
QP R ++MFQ EFA RL A+PG Y RL+VNT+L ++ +++V +N+F+PPP V
Sbjct: 123 EIQPLPRKFVLMFQLEFAQRLAAEPGQDQYSRLTVNTKLLSKTKIIIRVSRNSFKPPPNV 182
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTL 258
DS+VV + P P P ++ E++G RI F +KNKTL +IF+ K++L L N L
Sbjct: 183 DSAVVEMYPVGPPPGLDLDEFNGLTRILFSKKNKTLGAIFKTKSLLDDLANNIARL 238
>gi|323445795|gb|EGB02231.1| hypothetical protein AURANDRAFT_35437 [Aureococcus anophagefferens]
Length = 192
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 141/190 (74%)
Query: 8 KEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGT 67
K K + G + +G + ++ +K GQ+ LKNP +V++IV++A ++ TD +LEIGPGT
Sbjct: 3 KRKRDEARGGGEERGASSHLLAANKDLGQNFLKNPAIVDAIVERAKLQPTDSVLEIGPGT 62
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
GNLT KLL K + VE D RMV E+ +R ++ P +RL+++ GDVLK LPYFD+CVA
Sbjct: 63 GNLTVKLLAQAKKLTCVEFDRRMVREVAKRVENDPRKHRLEMVHGDVLKVALPYFDVCVA 122
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PY ISSP FKLL H+P FR A+IMFQ+EFA RL A+PGD LYCRLSVNTQL A+V+
Sbjct: 123 NLPYNISSPFLFKLLAHRPHFRSAVIMFQEEFAQRLSAKPGDALYCRLSVNTQLLAKVTQ 182
Query: 188 LLKVGKNNFR 197
L+KVG+NNFR
Sbjct: 183 LIKVGRNNFR 192
>gi|238593367|ref|XP_002393175.1| hypothetical protein MPER_07142 [Moniliophthora perniciosa FA553]
gi|215460264|gb|EEB94105.1| hypothetical protein MPER_07142 [Moniliophthora perniciosa FA553]
Length = 228
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/274 (44%), Positives = 158/274 (57%), Gaps = 46/274 (16%)
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQ 145
+D RM EL +R Q P RL+++ GD +K DLPYFD+C++N PYQISSPL F+LL +
Sbjct: 1 MDPRMAAELTKRVQGKPEQRRLEIMIGDFVKADLPYFDVCISNTPYQISSPLIFRLLSQR 60
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P R I+MFQ+EFA+RL+A+ G +L+ RLS N QL+A+V +L+ VGKNNFRPPPKV+SS
Sbjct: 61 PLPRICILMFQREFALRLIAKAGSELWSRLSANVQLYAKVDYLMHVGKNNFRPPPKVESS 120
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
VVRI PR P P V E+DG RI F R+NKT+ + F K V+ MLEKNYRT
Sbjct: 121 VVRIAPRDPPPPVKFEEFDGLGRIVFSRRNKTIHANFMAKGVIPMLEKNYRTW------- 173
Query: 266 NSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAV 325
S+ VEDD K K+ V
Sbjct: 174 -----------------------------CSEMNQMVEDD----------LSMKAKIEKV 194
Query: 326 LREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
L E E RA+K+ + L LLS F+ AGIHF+
Sbjct: 195 LEETGDTENRAAKMDVDDLLKLLSAFHDAGIHFA 228
>gi|429962918|gb|ELA42462.1| dimethyladenosine transferase [Vittaforma corneae ATCC 50505]
Length = 278
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 175/270 (64%), Gaps = 10/270 (3%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
G I KS+GQHILKN L+++I++KA +K TD +LEIG GTG++T KLL+ K VIA E
Sbjct: 2 GDIKLKKSEGQHILKNHGLIDTIIEKAHVKHTDTVLEIGAGTGSITLKLLQKAKKVIAYE 61
Query: 86 LDSRMVLELQRRFQ-STPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
D ++ EL + + + N+L++IQ +VL+ ++P+FD+C++NIP+ IS P+ KL+ +
Sbjct: 62 TDKKLARELIHKVNMAAEFKNKLELIQSNVLRQNIPHFDLCISNIPFNISCPIILKLISY 121
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
F+CA I+ QKEF RL A+PG Y RLSV QL A V H++KV KN+F PPPKVD+
Sbjct: 122 D--FKCAYILVQKEFGDRLTARPGSDEYSRLSVIVQLLANVEHVMKVSKNSFMPPPKVDT 179
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
++IEP+ PRP +N E+D L+ CF RKNKTL L N+ + L + T S+
Sbjct: 180 CFMKIEPKIPRPPININEFDVLLKACFGRKNKTL-----LANLKTPLIQGKITKVPEYSN 234
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDD 294
N + +I D+ L D+ + MG+DD
Sbjct: 235 LNPASIIDQI-VDSIGLTDARTSK-MGIDD 262
>gi|389585805|dbj|GAB68535.1| dimethyladenosine transferase [Plasmodium cynomolgi strain B]
Length = 350
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/361 (37%), Positives = 180/361 (49%), Gaps = 96/361 (26%)
Query: 11 GKQKSGPYQGQGLGAGGIS-------------FHKSKGQHILKNPLLVESIVQKAGIKST 57
GK+KS QG G G+ IS +K GQH+LKNP +++ I+ A IKS+
Sbjct: 27 GKKKSSTTQG-GNGSRHISTSKVKSGNKMNMILYKKHGQHLLKNPGILDKILLAAKIKSS 85
Query: 58 DVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
DV+LEIG GTGNLT KLL K VI +++D+RMV
Sbjct: 86 DVVLEIGCGTGNLTVKLLPIAKKVITIDIDARMV-------------------------- 119
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
NIPY+ISSPL FKL+ H+P F+CA++MFQKEFA R++A GD Y RL+V
Sbjct: 120 ---------TNIPYKISSPLIFKLIAHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTV 170
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKT 237
N +L +V + V +++F PPPKVDS ++++ P++ VN EWD LRICF RK KT
Sbjct: 171 NVKLFCKVVKICNVDRSSFNPPPKVDSVILKLIPKENNFFVNFDEWDNLLRICFSRKRKT 230
Query: 238 LSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSD 297
L +IF+ VL+MLE NY+ N + + P
Sbjct: 231 LHAIFKRNAVLNMLEHNYKNFCTF---------NKIVPVNFP------------------ 263
Query: 298 DEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIH 357
FK L L+E E R+ L + +FL LL FN+ GIH
Sbjct: 264 --------------------FKKYCLDTLKELDMTECRSVSLDENDFLKLLLKFNQKGIH 303
Query: 358 F 358
F
Sbjct: 304 F 304
>gi|123455450|ref|XP_001315469.1| dimethyladenosine transferase family protein [Trichomonas vaginalis
G3]
gi|121898147|gb|EAY03246.1| dimethyladenosine transferase family protein [Trichomonas vaginalis
G3]
Length = 295
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 186/344 (54%), Gaps = 54/344 (15%)
Query: 16 GPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLL 75
P Q G G S GQ+IL++ ++V++IV + D ILEIGPG GN+T+++L
Sbjct: 4 APKSAQPKG-GLFKMDHSLGQNILRSKVVVKNIVDAGEPRPGDKILEIGPGNGNMTEEML 62
Query: 76 -EAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQIS 134
G VIA+E D RM +EL+++F P L++I DVL DLP FD+C++NIPY IS
Sbjct: 63 SREGIEVIAIEKDQRMCVELKKKFPRHP---NLRIINADVLSVDLPEFDLCISNIPYNIS 119
Query: 135 SPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKN 194
S + FKLL +P FR ++M QKEF R+VA+PG + RL++NTQL+A V ++ V +
Sbjct: 120 SAIVFKLL-ARPTFRRTVLMVQKEFGERIVARPGKDGWGRLAINTQLYASVKLVMNVSRK 178
Query: 195 NFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN 254
NF PPPKVDS VV I+PR+ +P ++ EWDG +++CF R N+TL + F K + ++L +N
Sbjct: 179 NFVPPPKVDSIVVSIQPREVQPDIDFNEWDGLIKLCFTRPNRTLQATFHKKKIRALLNEN 238
Query: 255 YRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGE 314
L N +M ++ E
Sbjct: 239 REKY----------------------LSSINQQATMSIE--------------------E 256
Query: 315 VSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ E+ VL + R +L ++FL LL FN G+HF
Sbjct: 257 LIEY------VLGTTVLAQSRPMELDIEDFLNLLKEFNNGGVHF 294
>gi|443897390|dbj|GAC74731.1| ribosomal RNA adenine dimethylase [Pseudozyma antarctica T-34]
Length = 240
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 155/260 (59%), Gaps = 49/260 (18%)
Query: 101 TPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFA 160
P +L ++ GD KT+LPYFD+C++N PYQISSPL FKLL H+P FRCAI+MFQ+EFA
Sbjct: 29 APEQRKLDIMIGDFCKTELPYFDVCISNTPYQISSPLVFKLLSHRPLFRCAILMFQREFA 88
Query: 161 MRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNP 220
+RL+A+PGD L+CRLS N QL+++V H++KV +N+FRPPP+V+SSVVRI P P P +
Sbjct: 89 LRLIARPGDNLWCRLSANVQLYSKVDHIMKVSRNSFRPPPQVESSVVRITPLNPPPAIPF 148
Query: 221 VEWDGFLRICFIRKNKTL-SSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTP 279
E+DG RI F R+NKT+ +S F + V+ MLE NY+T A++
Sbjct: 149 EEFDGLTRIVFSRRNKTVRASFFDARGVIDMLEANYKTYCAVK----------------- 191
Query: 280 SLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKL 339
E+ +D+ F D V VL + E RA+K+
Sbjct: 192 -------------------EIMPQDN------------FADLVKQVLIDTDTAENRAAKM 220
Query: 340 TQQEFLYLLSLFNKAGIHFS 359
+ L LL+ F++ GIHFS
Sbjct: 221 DIDDLLKLLAAFHEKGIHFS 240
>gi|401413144|ref|XP_003886019.1| putative dimethyladenosine transferase [Neospora caninum Liverpool]
gi|325120439|emb|CBZ55993.1| putative dimethyladenosine transferase [Neospora caninum Liverpool]
Length = 367
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 178/332 (53%), Gaps = 58/332 (17%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ K GQH+LKN +++ IVQ A I+S+D +LEIGPGTGNLT +LL + V+A+++
Sbjct: 48 GLPLQKKFGQHLLKNQAVLDKIVQAADIRSSDTVLEIGPGTGNLTMRLLPVAREVVALDV 107
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D+RMV E+++R S + N L V GD L++DL FD + + +S +T
Sbjct: 108 DARMVSEVKKRAISNGFMN-LVVRHGDALRSDLGTFDAQQPPLQERDTSTVT-------- 158
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
RCA++MFQKEF RL+AQPGDK YCRL+ N L V + KV +F PPPKVDS V
Sbjct: 159 --RCAVLMFQKEFGERLMAQPGDKNYCRLAANVSLFCTVQRVCKVEAKHFTPPPKVDSVV 216
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQN 266
V++ PR V+ EWDG +RICF RKN+TL ++FR ++LSMLE NY+T L +
Sbjct: 217 VKVVPRPNLLDVDFKEWDGLMRICFGRKNRTLHALFRRSSILSMLEANYKTWCTLNNCAP 276
Query: 267 SSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVL 326
+S F+D L VL
Sbjct: 277 TS-----------------------------------------------QPFRDFCLGVL 289
Query: 327 REGQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
E E+R+ + + LL FNK GIHF
Sbjct: 290 SETGLGERRSVTIDIDTYFSLLLAFNKKGIHF 321
>gi|269860446|ref|XP_002649944.1| dimethyladenosine transferase [Enterocytozoon bieneusi H348]
gi|220066631|gb|EED44106.1| dimethyladenosine transferase [Enterocytozoon bieneusi H348]
Length = 275
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 144/214 (67%), Gaps = 3/214 (1%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
+ KS+ QH+L N L++ I+ KA IK TD++LEIG GTGN+T KLL K VIA E D
Sbjct: 3 VQLKKSESQHMLVNNNLIDVIIDKAKIKHTDIVLEIGAGTGNITMKLLPKAKKVIAYEKD 62
Query: 88 SRMVLELQRRFQSTPY-SNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
++ E+Q + + +L +IQ DVL+ +LP+FD C++NIP+ IS P+ KL+
Sbjct: 63 KKLANEIQNKLYTQKLLKAKLHLIQDDVLENNLPHFDKCISNIPFNISLPIILKLM--NS 120
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F+ A I+ QKEFA RL ++PG K Y RLSV QL A+V +LKV KNNF P PKVD+
Sbjct: 121 HFKNAFILVQKEFADRLTSRPGSKDYSRLSVIVQLFAKVECVLKVKKNNFIPQPKVDTCF 180
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
++IEP+ PRP ++ E+D L+ICF RKNKTL S
Sbjct: 181 IKIEPKVPRPSLDLTEFDNLLKICFSRKNKTLMS 214
>gi|116197625|ref|XP_001224624.1| hypothetical protein CHGG_06968 [Chaetomium globosum CBS 148.51]
gi|88178247|gb|EAQ85715.1| hypothetical protein CHGG_06968 [Chaetomium globosum CBS 148.51]
Length = 371
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 141/212 (66%), Gaps = 7/212 (3%)
Query: 7 RKEKGKQKSGPY-----QGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVIL 61
++++G +GPY +G F K GQHILKNP + ++IV KA +K TDV++
Sbjct: 6 KQKRGGASNGPYDRKPSKGSSSNTNIFRFDKDFGQHILKNPGISDAIVDKAYLKPTDVVV 65
Query: 62 EIGPGTGNLTKKLLE-AGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK-TDL 119
E+GPGTGN+T + L+ A K+ AVELD RM E+ +R Q TP + +L+VI GDV+K ++
Sbjct: 66 EVGPGTGNITVRALDKAKKLTRAVELDPRMGAEVTKRVQGTPLAKKLEVILGDVIKMPEM 125
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P D ++N PYQISSPL FK+L R A++MFQ+EFA RLVA+PGD LY RLSVN
Sbjct: 126 PPCDALISNTPYQISSPLIFKMLAMPNPPRVAVLMFQREFAKRLVAKPGDALYSRLSVNV 185
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
A H++KVGK NF+PPPKV+S V P
Sbjct: 186 NFWATCKHIMKVGKQNFKPPPKVESDVANPYP 217
>gi|171694431|ref|XP_001912140.1| hypothetical protein [Podospora anserina S mat+]
gi|170947164|emb|CAP73969.1| unnamed protein product [Podospora anserina S mat+]
Length = 386
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 175/311 (56%), Gaps = 33/311 (10%)
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK-TDLPYFDICVANIPYQISSPLTFK 140
+V++D RM E+ +R Q TP + +L+VI GDV+K ++P D ++N PYQISSPL FK
Sbjct: 76 FSVDIDPRMGAEVTKRVQGTPLAKKLEVILGDVIKMPEMPPCDALISNTPYQISSPLIFK 135
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
+L R A++MFQ+EFA RLVA+PGD LY RLSVN A H++KVGK NF+PPP
Sbjct: 136 MLAMPNPPRVAVLMFQREFAKRLVAKPGDALYSRLSVNVNFWATCKHIMKVGKQNFKPPP 195
Query: 201 KVDSSVVRIEPR--KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYR-- 256
KV+S VVRIEP RP + E+DG LRI F RKNKTL++ F +K VL+M E+NY+
Sbjct: 196 KVESDVVRIEPLIGSARPNIAFDEFDGLLRIAFNRKNKTLNASFAIKEVLAMCERNYKVY 255
Query: 257 -TLQALQSSQNSSLGNTEI-------------GTDTPSLGDSNGDQSMGVDDGSDDEM-- 300
+L + + ++ G + + + G+D D++M
Sbjct: 256 CSLNNIPVDEGAAAGTGAVVGEEEGMDVDMDDDGADADDNEEEEEDDNGMDVEDDEDMPE 315
Query: 301 ---DVEDDDGDSDVEGEVSE---------FKDKVLAVLREGQFEEKRASKLTQQEFLYLL 348
+++D++ + V S K KV VL EKRA + Q +FL LL
Sbjct: 316 FFKEMKDEEDKAAVAKTPSRNPKSKVAMVVKAKVNKVLASTGLGEKRARQCDQNDFLKLL 375
Query: 349 SLFNKAGIHFS 359
F++ GIHFS
Sbjct: 376 VAFHEEGIHFS 386
>gi|431918485|gb|ELK17706.1| Putative dimethyladenosine transferase [Pteropus alecto]
Length = 280
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 167/342 (48%), Gaps = 106/342 (30%)
Query: 19 QGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG 78
Q +GLG G + F+ GQHILKNPL+V SI++KA ++ TDV+LE+GPGTGN+T KLLE
Sbjct: 44 QDRGLGWGRLMFNTGIGQHILKNPLIVNSIIEKAALRPTDVVLEVGPGTGNMTVKLLEKA 103
Query: 79 KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLT 138
K VIA ELD R+V EL +R Q TP +++L+V+ G D+ ++P+
Sbjct: 104 KKVIACELDPRLVAELHKRVQGTPLASKLQVMVG----------DVLKTDLPF------- 146
Query: 139 FKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL-LKVGKNNFR 197
A V++L +VGKNNFR
Sbjct: 147 ------------------------------------------FDACVANLPYQVGKNNFR 164
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRT 257
PPPKV+SSVVR+EP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 165 PPPKVESSVVRLEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI 224
Query: 258 LQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSE 317
+ S+ NT I D
Sbjct: 225 --------HCSIHNTIIPEDF--------------------------------------S 238
Query: 318 FKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
DK+ +L F +KRA + +F+ LL FN GIHFS
Sbjct: 239 IADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 280
>gi|345793835|ref|XP_003433815.1| PREDICTED: probable dimethyladenosine transferase [Canis lupus
familiaris]
Length = 258
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 162/335 (48%), Gaps = 101/335 (30%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
AGG++F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTGN+T KLLE K VIA
Sbjct: 25 AGGLTFNTGIGQHILKNPLVVNSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVIAC 84
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H
Sbjct: 85 ELDPRLVAELHKRVQGTPLASKLQVLVGDVLKTDLPFFDACVANLPYQISSPFVFKLLLH 144
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+P FR T+ R+ LL F
Sbjct: 145 RPFFRFV---------------------------TKGPKRILSLLFTHAYAF-------- 169
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
S+VRI F+RKNKTLS+ F+ V +LEKNYR
Sbjct: 170 SLVRI--------------------TFVRKNKTLSAAFKSSAVQQLLEKNYRI------- 202
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLA 324
+ SL N I D DK+
Sbjct: 203 -HCSLHNIIIPEDF--------------------------------------SIADKIQQ 223
Query: 325 VLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
+L F +KRA + +F+ LL FN GIHFS
Sbjct: 224 ILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 258
>gi|226292329|gb|EEH47749.1| dimethyladenosine transferase [Paracoccidioides brasiliensis Pb18]
Length = 310
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 116/249 (46%), Positives = 150/249 (60%), Gaps = 23/249 (9%)
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
ISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN Q+ AR+ H++KVG
Sbjct: 63 ISSPLTFKLLATNPAPRVCILMFQREFAMRLFAKPGDKLYNRLSVNAQMWARIDHIMKVG 122
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSML 251
KNNF+PPP V+SSVVRI P+ PRPQ++ EWDG LRI F+RKNKT+ SS +VL ML
Sbjct: 123 KNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRIAFVRKNKTIRSSFLGTTSVLDML 182
Query: 252 EKNYRTLQALQSSQNSSLGNTEIGTDTP-SLGDSNGDQSMGVD----------------- 293
E NYRT A Q++ G E P ++ + G+ G+D
Sbjct: 183 ESNYRTWCA-QNNIPVEDGPAEDSESEPMNIVEDQGEPDEGLDGTMDVDDDDDMDVHEFF 241
Query: 294 -DGSDDEMDVEDDDGDSDVEGEVSEF-KDKVLAVLREGQ-FEEKRASKLTQQEFLYLLSL 350
D +V+ ++ +G+V E ++KV VL + +KRA + +FL LL
Sbjct: 242 ADEPKLNSNVQKENPGRKKKGKVRELVREKVRQVLEDDTGLADKRARMCDEGDFLKLLWA 301
Query: 351 FNKAGIHFS 359
FN GIHFS
Sbjct: 302 FNLKGIHFS 310
>gi|295673178|ref|XP_002797135.1| dimethyladenosine transferase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282507|gb|EEH38073.1| dimethyladenosine transferase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 309
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 120/257 (46%), Positives = 150/257 (58%), Gaps = 40/257 (15%)
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
ISSPLTFKLL PA R I+MFQ+EFAMRL A+PGDKLY RLSVN Q+ AR+ H++KVG
Sbjct: 63 ISSPLTFKLLATNPAPRVCILMFQREFAMRLFAKPGDKLYNRLSVNAQMWARIDHIMKVG 122
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL-SSIFRLKNVLSML 251
KNNF+PPP V+SSVVRI P+ PRPQ++ EWDG LRI F+RKNKT+ SS +VL ML
Sbjct: 123 KNNFKPPPAVESSVVRIVPKNPRPQISYDEWDGLLRIAFVRKNKTIRSSFLGTTSVLDML 182
Query: 252 EKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDD-GSDDE----------- 299
E NYRT A QN+ I + DS G+ V+D G DE
Sbjct: 183 ESNYRTWCA----QNN------IPVEDGPAEDSEGEPMNTVEDQGEPDEGLDGTMDVDDD 232
Query: 300 ---------------MDVEDDDGDSDVEGEVSEF-KDKVLAVLR-EGQFEEKRASKLTQQ 342
+V+ ++ +G+V E ++KV VL E +KRA +
Sbjct: 233 DMHVHEFFADEPKLNSNVQKENPGRKKKGKVRELVREKVRQVLEDETGLADKRARMCDEG 292
Query: 343 EFLYLLSLFNKAGIHFS 359
+FL LL FN GIHFS
Sbjct: 293 DFLKLLWAFNLKGIHFS 309
>gi|242045760|ref|XP_002460751.1| hypothetical protein SORBIDRAFT_02g034340 [Sorghum bicolor]
gi|241924128|gb|EER97272.1| hypothetical protein SORBIDRAFT_02g034340 [Sorghum bicolor]
Length = 396
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 185/352 (52%), Gaps = 52/352 (14%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV-ELDS 88
HK +GQH+L NP ++++IV++A I+ D +LE+GPGTGNLT +LL + +A E+D
Sbjct: 34 LHKRRGQHLLTNPRVLDAIVRRAAIRPGDAVLEVGPGTGNLTVRLLASPAASVAAVEIDP 93
Query: 89 RMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAF 148
RM + R + +++L V GD +K D P FD CV+NIPY ISSPLT KLLF F
Sbjct: 94 RMAAAVAARARDLGLAHKLTVTTGDAMKVDFPEFDACVSNIPYAISSPLTAKLLFGSYRF 153
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
R A ++ Q+EFA RLV PG + L+ N +L A VS L+ V KN+F P P VDSS+V
Sbjct: 154 RTATLLVQREFARRLVGAPGHGEHNHLATNVRLVAHVSLLMDVSKNDFVPVPGVDSSLVE 213
Query: 209 IEPRKPRP-QVNPV----EWDGFLRICF---------------IRKNKTLSSIFRLKNVL 248
I ++ RP +V P EW F R+CF +K KTL +IF+ K +
Sbjct: 214 IRMKEVRPTEVEPGISLDEWLEFARVCFGQHQLQQQQEKKKKRKKKEKTLGTIFKQKEM- 272
Query: 249 SMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGD 308
A++ + S + IG + S G D DV + D
Sbjct: 273 -----------AMELFRLSRIDEERIGNASSS--------------GRDAPHDVNNADDR 307
Query: 309 SDVEGEVSE-----FKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAG 355
D EG+ S+ FK+++ L+ + +R S L+ + L LL L + G
Sbjct: 308 CDEEGDFSKEEYVVFKERIAGTLQSAKLNNERPSMLSNDDMLRLLRLSSNGG 359
>gi|395510354|ref|XP_003759442.1| PREDICTED: probable dimethyladenosine transferase [Sarcophilus
harrisii]
Length = 198
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 123/212 (58%), Gaps = 46/212 (21%)
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
RCA++MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+K+GKNNFRPPPKV+SSVV
Sbjct: 33 LRCAVLMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKIGKNNFRPPPKVESSVV 92
Query: 208 RIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNS 267
RIEP+ P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR +
Sbjct: 93 RIEPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI--------HC 144
Query: 268 SLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLR 327
S+ N I D DK+ +L
Sbjct: 145 SVHNIAIPEDF--------------------------------------SIADKIQNILT 166
Query: 328 EGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
F +KRA + +F+ LL +FN GIHFS
Sbjct: 167 GTDFSDKRARSMDIDDFIRLLHVFNAEGIHFS 198
>gi|322801725|gb|EFZ22327.1| hypothetical protein SINV_09620 [Solenopsis invicta]
Length = 155
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 110/136 (80%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI F+K KGQHILKNPL+++++V+KA +++TDV+LEIGPGTGN+T K+L+ K VIA E+
Sbjct: 20 GILFNKDKGQHILKNPLVIQTMVEKAALRATDVVLEIGPGTGNMTVKMLDKAKKVIACEI 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D RMV ELQ+R Q T Y ++L+++ GDVLK+DLP+FD+CVANIPYQISSPL FKLL H+P
Sbjct: 80 DPRMVAELQKRVQGTVYQSKLQIVLGDVLKSDLPFFDLCVANIPYQISSPLVFKLLSHRP 139
Query: 147 AFRCAIIMFQKEFAMR 162
F + ++ E +R
Sbjct: 140 LFSLQLSSYKMETNVR 155
>gi|47157009|gb|AAT12376.1| putative dimethyladenosine transferase-like protein [Antonospora
locustae]
Length = 219
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
++ E D+R+ EL ++ + S++ ++ GD L+ P FD+C++NIPYQISSPL FK
Sbjct: 2 LVCYEKDTRLAAELVKKVSARHLSHKFELNVGDALRATFPPFDMCISNIPYQISSPLLFK 61
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL Q F+CA IMFQ+EFA RL+A+PG Y RLSV QL A+V +++ V +N+F PPP
Sbjct: 62 LL--QEDFKCAYIMFQREFAQRLIARPGCSEYSRLSVAVQLLAKVHNVMNVSRNSFVPPP 119
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM--LEKNYRTL 258
VDSSVVRIEPR PRP +N E++ L+ICF+RKNK LS IF+ + M + K Y TL
Sbjct: 120 MVDSSVVRIEPRVPRPPINIEEFNRLLKICFLRKNKRLSGIFKRTVIQDMQKVNKAY-TL 178
Query: 259 QALQSSQNSSLGNTEIGTDTPSLGD 283
Q ++ L ++G D + D
Sbjct: 179 QEIEKKTTGIL--RKLGADRAAKMD 201
>gi|26347035|dbj|BAC37166.1| unnamed protein product [Mus musculus]
Length = 160
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 118/206 (57%), Gaps = 46/206 (22%)
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
MFQ+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SSVVRIEP+
Sbjct: 1 MFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKN 60
Query: 214 PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTE 273
P P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR + S+ NT
Sbjct: 61 PPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI--------HCSVQNTV 112
Query: 274 IGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEE 333
I D DK+ +L F +
Sbjct: 113 IPEDF--------------------------------------SIADKIQQILTSTGFSD 134
Query: 334 KRASKLTQQEFLYLLSLFNKAGIHFS 359
KRA + +F+ LL FN GIHFS
Sbjct: 135 KRARSMDIDDFIRLLHGFNAEGIHFS 160
>gi|395510869|ref|XP_003759690.1| PREDICTED: probable dimethyladenosine transferase-like [Sarcophilus
harrisii]
Length = 220
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 104/141 (73%), Gaps = 6/141 (4%)
Query: 9 EKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTG 68
E G G Y+G G+ F+ GQHILKNPL+V SI+ KA ++ TDV+LE+GPGTG
Sbjct: 47 EPGTAPGGAYKG------GVMFNTGLGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTG 100
Query: 69 NLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVAN 128
N+T KLLE K V+A ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN
Sbjct: 101 NMTVKLLEKVKKVVACELDPRLVAELHKRVQGTPQASKLQVMVGDVLKTDLPFFDACVAN 160
Query: 129 IPYQISSPLTFKLLFHQPAFR 149
+PYQISSP FKLL H+P FR
Sbjct: 161 LPYQISSPFVFKLLLHRPFFR 181
>gi|18657022|gb|AAL78109.1|AC093568_19 Putative dimethyladenosine transferse [Oryza sativa]
gi|21321758|gb|AAM47293.1|AC122146_12 Putative dimethyladenosine transferse [Oryza sativa Japonica Group]
Length = 233
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 126/171 (73%), Gaps = 2/171 (1%)
Query: 190 KVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
KVG+NNFRPPPKVDSSVVRIEPRKP P V+ EWDG +R+CF RKNKTL +IF+ K VL
Sbjct: 64 KVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVRLCFNRKNKTLGAIFKQKRVLE 123
Query: 250 MLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSN-GDQSMGVDDGSDDEMDVEDDDGD 308
+LEKNY+T+Q+LQ + ++ G ++ D +L S D +M +DD+ ++E DD D
Sbjct: 124 LLEKNYKTMQSLQLTSDAEKGEEKMSPDDVALLSSMVDDMNMESSYENDDDDEMEMDDAD 183
Query: 309 SDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS 359
VE FK+K++ +L++G F EKRASKL+Q +FLYLLSLFNKAGIHFS
Sbjct: 184 MVVESRAC-FKEKIMGILQQGDFAEKRASKLSQVDFLYLLSLFNKAGIHFS 233
>gi|294936255|ref|XP_002781681.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239892603|gb|EER13476.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 913
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
TD +LE+GPGTGN++ KL E V+A+E++ + E++RR + SN ++V+ GD +
Sbjct: 546 TDTVLEMGPGTGNMSVKLSELANRVVAMEVNEGLAKEVERRAEMKGASN-MEVVTGDFKR 604
Query: 117 TDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS 176
LP FD+ +AN+PY +++ KL+ H FR IIM Q EF +L+A PG+K+Y RLS
Sbjct: 605 LALPRFDVVIANLPYHLATGFLLKLMGH--PFRTGIIMLQHEFGKKLLADPGEKIYSRLS 662
Query: 177 VNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNK 236
+N ++ + + KV F P P+ S ++R+ PR P P+V+ EWD +RI F RKN+
Sbjct: 663 LNMRMFFKAERICKVPGRAFFPQPQTTSVIIRLTPRVPAPKVDFAEWDAMIRIAFFRKNQ 722
Query: 237 TLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSL 269
+ +F+ VL+MLE NY+ ++ +S+
Sbjct: 723 DVFKMFKRLTVLNMLEHNYKMWCSINRIVTASV 755
>gi|284161199|ref|YP_003399822.1| dimethyladenosine transferase [Archaeoglobus profundus DSM 5631]
gi|284011196|gb|ADB57149.1| dimethyladenosine transferase [Archaeoglobus profundus DSM 5631]
Length = 251
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 126/210 (60%), Gaps = 2/210 (0%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KSKGQHIL + + IV+ A + DV+LE+G G GNLT+ LL + K V +E+DSR
Sbjct: 5 KSKGQHILVDKKYLYKIVRYADLSYNDVVLEVGCGLGNLTRLLLRSVKKVYGIEIDSRFC 64
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+ +F S R +I+GD LK D P FD VANIPYQISSPLTFKLL H F+ A
Sbjct: 65 KILREKFADEIESGRFVLIEGDALKVDFPKFDKFVANIPYQISSPLTFKLLKHD--FKLA 122
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++ +QKEFA RLVA+ G K Y RLSV + + R L + FRP PKV+S++VRI P
Sbjct: 123 VVTYQKEFAERLVAREGSKKYGRLSVVAKAYCRAEILDIIPPKAFRPRPKVESAIVRIFP 182
Query: 212 RKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
N ++ +R F R+ K I
Sbjct: 183 EPEVVVENKEIFEDLVRFAFSRRRKKFGKI 212
>gi|34394642|dbj|BAC83949.1| Ribosomal RNA adenine dimethylase-like protein [Oryza sativa
Japonica Group]
Length = 261
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 147/270 (54%), Gaps = 11/270 (4%)
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFR 149
MV + R + +++L VI+ D ++ + P FD+CVANIPY ISSPL KLLF FR
Sbjct: 1 MVDAVTARVDALGLAHKLTVIRADAVEAEFPEFDVCVANIPYGISSPLIAKLLFGPYRFR 60
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
A ++ QKEFA RLVA PGD Y RL+ N ++ A L+ V K +F P PKVDSS+V I
Sbjct: 61 AATLLLQKEFARRLVAAPGDSEYNRLAANVRMVADARLLMDVSKRDFVPMPKVDSSLVEI 120
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKN-VLSMLEKNYRTLQALQSSQNSS 268
PR P V+ EW F R CF +KNKTL +IF+ K VL + ++ + ++
Sbjct: 121 RPRAAEPNVDLAEWLAFTRSCFGQKNKTLGAIFKQKRKVLELFRRS-------RCAEERC 173
Query: 269 LGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLRE 328
GN G + + GD + DG +E D S E EV+ FK K+ L
Sbjct: 174 DGNANAGGGSRLIALGGGDDDGDMSDGDSNE---GHDGAPSFSEEEVAVFKAKITGALES 230
Query: 329 GQFEEKRASKLTQQEFLYLLSLFNKAGIHF 358
+ KR SKL+ E L LL L N+ G+ F
Sbjct: 231 CELAGKRPSKLSNDELLRLLKLLNEQGVRF 260
>gi|3646270|emb|CAA08815.1| putative dimethyladenosine transferase [Homo sapiens]
Length = 157
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 113/203 (55%), Gaps = 46/203 (22%)
Query: 157 KEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRP 216
+ FA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P P
Sbjct: 1 ENFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPP 60
Query: 217 QVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGT 276
+N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR + S+ N I
Sbjct: 61 PINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRI--------HCSVHNIIIPE 112
Query: 277 DTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRA 336
D DK+ +L F +KRA
Sbjct: 113 DF--------------------------------------SIADKIQQILTSTGFSDKRA 134
Query: 337 SKLTQQEFLYLLSLFNKAGIHFS 359
+ +F+ LL FN GIHFS
Sbjct: 135 RSMDIDDFIRLLHGFNAEGIHFS 157
>gi|332158063|ref|YP_004423342.1| dimethyladenosine transferase [Pyrococcus sp. NA2]
gi|331033526|gb|AEC51338.1| dimethyladenosine transferase [Pyrococcus sp. NA2]
Length = 271
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 140/229 (61%), Gaps = 12/229 (5%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI + GQH + ++ V+ A + DV+LEIGPG G LT +L + K V
Sbjct: 9 LSKYGIRPKDTIGQHFIIVEDVIRKAVETADVNEKDVVLEIGPGLGFLTNELAKRAKKVY 68
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
A+ELD +M+ L+ ++ N +++I+GD +K + P F+ V+NIPYQISSP TFKLL
Sbjct: 69 AIELDRKMIQILKNEYKW----NNVEIIEGDAIKLEWPEFNKVVSNIPYQISSPFTFKLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA+R+ A+PG K Y RLS+ TQ A V ++K+G+ F P PKV
Sbjct: 125 --KKDFELAVVMYQLEFALRMTARPGSKNYSRLSLMTQALADVEIVMKIGRGAFYPRPKV 182
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
DS++V I PRK + ++N + ++ F + KT+S LK+ + ML
Sbjct: 183 DSALVVIRPRKDKVELN----ENLVKALFQHRRKTVSR--ALKDSIHML 225
>gi|410722277|ref|ZP_11361583.1| dimethyladenosine transferase [Methanobacterium sp. Maddingley
MBC34]
gi|410597312|gb|EKQ51939.1| dimethyladenosine transferase [Methanobacterium sp. Maddingley
MBC34]
Length = 284
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 20 GQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGK 79
Q L I + KGQ+ L N ++ IV+ A + +DV+LEIG G G LT L
Sbjct: 7 SQLLKKHQIRLDRRKGQNYLINNHILTKIVENANLNDSDVVLEIGAGIGTLTIPLARKSA 66
Query: 80 MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTF 139
V+A E D R+V L+ R Q SN ++V++GD K D PYF+ V+N+PYQISSP+TF
Sbjct: 67 KVVAFEQDKRIVRILKERLQELEISN-VEVMEGDATKIDFPYFNKVVSNLPYQISSPITF 125
Query: 140 KLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
KLL + F AI+M+Q EFA R+VAQPG+ Y RLSV L R L KV +N F PP
Sbjct: 126 KLLKYD--FDYAILMYQLEFAQRMVAQPGESNYSRLSVMMNLCTRTELLFKVPRNAFLPP 183
Query: 200 PKVDSSVVRIEPRKPRPQVN 219
P++ S+V+++ P++ PQV+
Sbjct: 184 PRISSAVIKLVPQE-NPQVD 202
>gi|435850914|ref|YP_007312500.1| dimethyladenosine transferase [Methanomethylovorans hollandica DSM
15978]
gi|433661544|gb|AGB48970.1| dimethyladenosine transferase [Methanomethylovorans hollandica DSM
15978]
Length = 274
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 137/220 (62%), Gaps = 12/220 (5%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + +++ IV+ A I +V+LEIG G GNLT++LL V+A+E D ++V L+
Sbjct: 22 QHFLVDEGILDRIVESADIVPGEVVLEIGAGIGNLTQRLLHLADKVVAIEFDPKLVAVLE 81
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
RF+ +++L +I GDVLK + P FD VAN+PY ISS +TFKL H F+ I+M+
Sbjct: 82 DRFRG---NDKLHIIHGDVLKVEFPIFDKVVANLPYSISSEITFKLFKHD--FKLGILMY 136
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q EFA R++A+PG Y RL+VNT A S ++KV K F PPP+V+S+VV++ PR P
Sbjct: 137 QYEFAQRMIAKPGSGDYSRLTVNTAYFADASIIMKVPKGVFSPPPQVESAVVKVCPR-PA 195
Query: 216 PQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNY 255
P + D FLR NK ++KN S++E N+
Sbjct: 196 P-FTVTDKDFFLRFVTAIFNKRRK---KIKN--SIVESNH 229
>gi|313228792|emb|CBY17943.1| unnamed protein product [Oikopleura dioica]
Length = 193
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 116/168 (69%), Gaps = 5/168 (2%)
Query: 4 GKIRKEKGK---QKSGPYQGQGLGAG-GISFHKS-KGQHILKNPLLVESIVQKAGIKSTD 58
GK+R++ K + S + GA G+ F+ S GQHILKNP +V+S+V+KAG+ +D
Sbjct: 2 GKVRRQAAKSSGKTSKDSKTVTPGASQGLVFNTSGYGQHILKNPQVVQSMVEKAGVLPSD 61
Query: 59 VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
ILEIGPGTGN+T KLLE K VIA+E+D RMV E+Q+R TP ++L +I D LK +
Sbjct: 62 TILEIGPGTGNMTVKLLEKCKKVIALEVDERMVAEVQKRVMGTPLKHKLTIINKDALKAE 121
Query: 119 LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQ 166
LP+FD+ VAN+PY ISSP+TFKLL H+P FR A++M E L +Q
Sbjct: 122 LPFFDLVVANLPYAISSPITFKLLLHRPMFRVAVLMGVYEERRELASQ 169
>gi|14520595|ref|NP_126070.1| dimethyladenosine transferase [Pyrococcus abyssi GE5]
gi|27151615|sp|Q9V1P8.1|RSMA_PYRAB RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|5457811|emb|CAB49301.1| ksgA dimethyladenosine transferase [Pyrococcus abyssi GE5]
gi|380741122|tpe|CCE69756.1| TPA: dimethyladenosine transferase [Pyrococcus abyssi GE5]
Length = 269
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 135/221 (61%), Gaps = 10/221 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI + GQH L +++ ++ A + +DV+LE+GPG G LT +L + K V
Sbjct: 9 LSKYGIRPNDRIGQHFLIVKDVIDKAIEVAEVSKSDVVLEVGPGLGFLTDELSKRAKKVF 68
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
+ELD R++ L+ + N +++IQGD +K + P F+ V+NIPYQISSP TFKLL
Sbjct: 69 TIELDRRIIEILRNEYSW----NNVEIIQGDAVKVEWPSFNKVVSNIPYQISSPFTFKLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA+R+ A+PGD+ Y RLS+ TQ A V ++++GK F P PKV
Sbjct: 125 --KMEFERAVVMYQLEFALRMTAKPGDRNYSRLSLMTQALADVEIVMRIGKGAFYPKPKV 182
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
DS++V I P+K R ++N + ++ F + K +S R
Sbjct: 183 DSALVLITPKKDRIELN----ESLVKALFQHRRKVVSKALR 219
>gi|88604257|ref|YP_504435.1| dimethyladenosine transferase [Methanospirillum hungatei JF-1]
gi|119365031|sp|Q2FSA9.1|RSMA_METHJ RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|88189719|gb|ABD42716.1| dimethyladenosine transferase [Methanospirillum hungatei JF-1]
Length = 256
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 10/214 (4%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLE 93
+ QH L +P +V I I S ++LEIGPG G LT+ LLE G VI+VELD ++
Sbjct: 5 RDQHFLTDPRIVARIADILDI-SGRIVLEIGPGEGILTEALLERGARVISVELDRTLIER 63
Query: 94 LQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAII 153
L RRF S L ++QGD +K LP F+I +AN+PY ISSP+TF+LL F AI+
Sbjct: 64 LSRRFASEIADGSLTLLQGDAVKVPLPPFEIVMANLPYSISSPITFRLL--DIGFEAAIL 121
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
M+QKEFA R++A PG + RLS+ Q +AR + + F PPP V S+V+ IEPR+
Sbjct: 122 MYQKEFADRMMAHPGTRDCGRLSIMLQTYARANRCFDLPPGAFSPPPAVRSTVMWIEPRE 181
Query: 214 PRPQVNPVE----WDGFLRICFIRKNKTLSSIFR 243
P + P+ ++ +R F R+ KT+ S +
Sbjct: 182 P---LFPIHDRKIYEDLVRELFTRRRKTVQSTLK 212
>gi|375083677|ref|ZP_09730695.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus litoralis DSM 5473]
gi|374741677|gb|EHR78097.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus litoralis DSM 5473]
Length = 273
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 127/194 (65%), Gaps = 10/194 (5%)
Query: 30 FHKSKGQHILKNPLLVESIVQK----AGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
+H + +N L+VE ++Q+ A IK ++ +LEIGPG G LT +L + K V A+E
Sbjct: 12 YHLKPNSDLGQNFLIVEDVIQREVERAEIKESETVLEIGPGLGVLTDELAKRAKKVYAIE 71
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQ 145
DSR++ L+R ++ + +++I GD LK D PYFD V+N+PYQISSP+TFKLL +
Sbjct: 72 KDSRIIEILRREYRW----DNVELIHGDALKIDFPYFDKIVSNLPYQISSPITFKLLKYD 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
F+ A++++Q EFA R+VA+PGDK Y RLSV Q A V + K+G+ F P PKVDS+
Sbjct: 128 --FKKAVLIYQLEFAQRMVAKPGDKNYSRLSVMVQAKAEVELVEKIGRGAFYPKPKVDSA 185
Query: 206 VVRIEPRKPRPQVN 219
V+ + P+ QV+
Sbjct: 186 VIVMTPKPKDEQVD 199
>gi|408380984|ref|ZP_11178534.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Methanobacterium formicicum DSM 3637]
gi|407816249|gb|EKF86811.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Methanobacterium formicicum DSM 3637]
Length = 284
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 122/211 (57%), Gaps = 8/211 (3%)
Query: 20 GQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGK 79
Q L I + KGQ+ L N ++ I++ A + +DV+LEIG G G LT L E
Sbjct: 7 SQLLKKHQIRLDRRKGQNYLTNDHILAKIIENAQLNDSDVVLEIGAGIGTLTLPLAEKSS 66
Query: 80 MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTF 139
V+A E D R+V L+ R SN ++V++GD K + PYF+ V+N+PYQISSP+TF
Sbjct: 67 KVVAFEQDKRIVRVLRERLHELGISN-VEVMEGDATKMEFPYFNKVVSNLPYQISSPITF 125
Query: 140 KLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
KLL + F AI+M+Q EFA R+VAQPG+ Y RLSV L L V KN F PP
Sbjct: 126 KLLNYN--FDYAILMYQLEFAQRMVAQPGESNYSRLSVMMNLCTHTELLFNVPKNAFLPP 183
Query: 200 PKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC 230
P++ S+V+++ P+K NP F C
Sbjct: 184 PRISSAVIKLTPKK-----NPQADKFFANTC 209
>gi|14591574|ref|NP_143656.1| dimethyladenosine transferase [Pyrococcus horikoshii OT3]
gi|3258259|dbj|BAA30942.1| 290aa long hypothetical dimethyladenosine transferase [Pyrococcus
horikoshii OT3]
Length = 290
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 138/229 (60%), Gaps = 12/229 (5%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI S GQH L ++E ++ A + DVILE+GPG G LT +L + K V
Sbjct: 31 LSKYGIRPRDSIGQHFLIIEDVIEKAIETANVNENDVILEVGPGLGFLTDELAKRAKKVY 90
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
+E+D +++ L++ + N +K+IQGD ++ + P F+ V+NIPY+ISSP TFKLL
Sbjct: 91 TIEIDQKIIEILKKEYSW----NNVKIIQGDAVRVEWPKFNKVVSNIPYKISSPFTFKLL 146
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA+R+VA+PG + Y RLS+ Q V ++K+GK F P PKV
Sbjct: 147 --KTDFERAVVMYQLEFALRMVAKPGSRNYSRLSLMAQALGNVEIVMKIGKGAFYPRPKV 204
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
DS++V IEPRK + +N + ++ F + KT+ LK+ + ML
Sbjct: 205 DSALVLIEPRKDKIVLN----ENLVKALFQHRRKTVPR--ALKDSIHML 247
>gi|27151557|sp|O59487.2|RSMA_PYRHO RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
Length = 268
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 138/229 (60%), Gaps = 12/229 (5%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI S GQH L ++E ++ A + DVILE+GPG G LT +L + K V
Sbjct: 9 LSKYGIRPRDSIGQHFLIIEDVIEKAIETANVNENDVILEVGPGLGFLTDELAKRAKKVY 68
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
+E+D +++ L++ + N +K+IQGD ++ + P F+ V+NIPY+ISSP TFKLL
Sbjct: 69 TIEIDQKIIEILKKEYSW----NNVKIIQGDAVRVEWPKFNKVVSNIPYKISSPFTFKLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA+R+VA+PG + Y RLS+ Q V ++K+GK F P PKV
Sbjct: 125 --KTDFERAVVMYQLEFALRMVAKPGSRNYSRLSLMAQALGNVEIVMKIGKGAFYPRPKV 182
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
DS++V IEPRK + +N + ++ F + KT+ LK+ + ML
Sbjct: 183 DSALVLIEPRKDKIVLN----ENLVKALFQHRRKTVPR--ALKDSIHML 225
>gi|20094370|ref|NP_614217.1| dimethyladenosine transferase (rRNA methylase) [Methanopyrus
kandleri AV19]
gi|27151577|sp|Q8TWU7.1|RSMA_METKA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|19887438|gb|AAM02147.1| Dimethyladenosine transferase (rRNA methylase) [Methanopyrus
kandleri AV19]
Length = 278
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 133/221 (60%), Gaps = 8/221 (3%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI + GQH + + ++E +V+ A ++ D++LEIGPG G LT+ L+ VIAVEL
Sbjct: 15 GIRPRRRLGQHFMVDDNILEFMVEAAEVREDDIVLEIGPGPGLLTRYLMTRAGQVIAVEL 74
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-YFDICVANIPYQISSPLTFKLLFHQ 145
D RMV L+R P L++++ D L+ D+P + VANIPY ISSP+TFKLL +
Sbjct: 75 DGRMVEILKRELGEAP---NLEIVRADFLEYDVPDDVNKVVANIPYNISSPITFKLL--E 129
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
A++ +Q+EFA R+VA+PG K Y RL+V L A V L V + F PPP+V SS
Sbjct: 130 LDIDVAVLTYQREFAERMVAEPGSKKYSRLTVMVNLLADVELLRGVPRRAFIPPPRVGSS 189
Query: 206 VVRIEPR--KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VVR+ P+ + RP V+P + R F KNKT+ + L
Sbjct: 190 VVRLTPKSEEERPDVDPDTLESVCRALFQHKNKTVRNALLL 230
>gi|294495698|ref|YP_003542191.1| dimethyladenosine transferase [Methanohalophilus mahii DSM 5219]
gi|292666697|gb|ADE36546.1| dimethyladenosine transferase [Methanohalophilus mahii DSM 5219]
Length = 229
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 119/186 (63%), Gaps = 5/186 (2%)
Query: 33 SKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVL 92
S QH L N +++SI + A ++ DV+LEIG G GNLT++L+ VI +E DSR+V
Sbjct: 15 SLDQHFLVNEPILDSIAEAADLQIDDVVLEIGGGIGNLTERLVSRAGRVIVIERDSRLVA 74
Query: 93 ELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAI 152
LQ RF + + + +I+GD +K +LP F+ VAN+PY ISSP+TF+LL H F I
Sbjct: 75 VLQDRFHNV---SNIDIIEGDAMKVELPTFNKVVANLPYSISSPITFRLLNH--GFEKGI 129
Query: 153 IMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR 212
+M+Q EFA R+V PG K Y RLSV+TQ A V L K+ + F P PKV S+VV + PR
Sbjct: 130 LMYQYEFARRMVEAPGSKNYGRLSVDTQYFADVRLLRKISPSAFTPAPKVWSAVVEVVPR 189
Query: 213 KPRPQV 218
P +V
Sbjct: 190 PPAFEV 195
>gi|322779454|gb|EFZ09646.1| hypothetical protein SINV_04081 [Solenopsis invicta]
Length = 148
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 89/110 (80%)
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
MFQ+EFA RLVA+PGDKLYCRLS+NTQL ARV L+KVGKNNFRPPPKV+S+VVRIEPR
Sbjct: 1 MFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESNVVRIEPRN 60
Query: 214 PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
P P +N EWD RI F+RKNKTLS+ F+ V++MLEKNY+ +L +
Sbjct: 61 PPPPINYQEWDSLTRIAFMRKNKTLSAAFKQTTVVTMLEKNYKIHCSLNN 110
>gi|327400294|ref|YP_004341133.1| ribosomal RNA small subunit methyltransferase A [Archaeoglobus
veneficus SNP6]
gi|327315802|gb|AEA46418.1| Ribosomal RNA small subunit methyltransferase A [Archaeoglobus
veneficus SNP6]
Length = 250
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 129/216 (59%), Gaps = 6/216 (2%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
+ F KSKGQHI+ + I A + D +LE+G GTG LT LLE V +E+D
Sbjct: 1 MKFFKSKGQHIVSKAI-ARRIAGYAELSKKDTVLEVGCGTGVLTSVLLERAGKVYGIEID 59
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPA 147
+R V LQ +F R +I GD +K + P F+ V+NIPY ISSPLTFKLL H
Sbjct: 60 ARFVKLLQEKFAKEIDEGRFILIHGDAMKVEFPPFNKFVSNIPYFISSPLTFKLLRHD-- 117
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
F A++M+Q+EFA RLVA+ G+ Y RLSV + +A+ + V + FRPPP VDS+VV
Sbjct: 118 FDVAVVMYQREFAERLVARKGEN-YGRLSVVVKAYAKPEIVEYVSRKAFRPPPSVDSAVV 176
Query: 208 RIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSSIF 242
R+ +KP +V ++ ++ +R CF R+ K L I
Sbjct: 177 RL-IKKPEIEVENLQIFEDLVRYCFSRRRKQLGKIL 211
>gi|337283605|ref|YP_004623079.1| dimethyladenosine transferase [Pyrococcus yayanosii CH1]
gi|334899539|gb|AEH23807.1| dimethyladenosine transferase [Pyrococcus yayanosii CH1]
Length = 275
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 134/221 (60%), Gaps = 8/221 (3%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G+ ++ GQ+ L ++E V++A I D +LE+GPG G LT+KL E V
Sbjct: 9 LSKYGLRPNEDLGQNFLIVEDVIERSVERAAIGERDTVLEVGPGLGFLTEKLAEKAGKVY 68
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
A+E D+R+V L++ + + N ++VI+GD LK + P F+ V+N+PYQISSP TF+LL
Sbjct: 69 AIERDARLVEILRKEYD---WKN-VEVIKGDALKVEWPPFNKVVSNLPYQISSPFTFRLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H+ F A++M+Q EFA+R+VA+PGDK Y RLS+ Q A +VG+ F P PKV
Sbjct: 125 RHE--FEVAVLMYQLEFALRMVAKPGDKNYSRLSLMVQALAEAEIAERVGRGAFYPRPKV 182
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
DS+VV I P+ P +V E ++ F + K ++ R
Sbjct: 183 DSAVVVIRPKPPSERVELDE--NLVKALFQHRRKVVAKALR 221
>gi|383126360|gb|AFG43800.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
Length = 136
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 103/146 (70%), Gaps = 14/146 (9%)
Query: 191 VGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
VGKNNFRPPPKVDSSVVRIEPR P P ++ EWDG +R+CF RKNKTL +IFR K +LS+
Sbjct: 1 VGKNNFRPPPKVDSSVVRIEPRNPLPPISFKEWDGMVRLCFNRKNKTLGAIFRQKAILSL 60
Query: 251 LEKNYRTLQALQS----SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDD 306
LEKNY+T QALQ S SS G+ I LGD++ D SM +D G D MDV+
Sbjct: 61 LEKNYKTFQALQEACQKSNESSFGDVSI------LGDTSNDVSMDIDVGEDQGMDVD--- 111
Query: 307 GDSDVEGEVSEFKDKVLAVLREGQFE 332
D+D++ S+FKDKVL +L+EG FE
Sbjct: 112 -DTDMQEGASQFKDKVLNILKEGGFE 136
>gi|361067797|gb|AEW08210.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126358|gb|AFG43799.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126362|gb|AFG43801.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126364|gb|AFG43802.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126366|gb|AFG43803.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126368|gb|AFG43804.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126370|gb|AFG43805.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126372|gb|AFG43806.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126374|gb|AFG43807.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126376|gb|AFG43808.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126378|gb|AFG43809.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126380|gb|AFG43810.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126382|gb|AFG43811.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126384|gb|AFG43812.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126386|gb|AFG43813.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
gi|383126388|gb|AFG43814.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
Length = 136
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 103/146 (70%), Gaps = 14/146 (9%)
Query: 191 VGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
VGKNNFRPPPKVDSSVVRIEPR P P ++ EWDG +R+CF RKNKTL +IFR K +LS+
Sbjct: 1 VGKNNFRPPPKVDSSVVRIEPRNPLPPISFKEWDGMVRLCFNRKNKTLGAIFRQKAILSL 60
Query: 251 LEKNYRTLQALQS----SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDD 306
LEKNY+T QALQ S SS G+ I LGD++ D SM +D G D MDV+
Sbjct: 61 LEKNYKTFQALQEACQKSNESSFGDVSI------LGDTSNDVSMDIDVGEDQGMDVD--- 111
Query: 307 GDSDVEGEVSEFKDKVLAVLREGQFE 332
D+D++ S+FKDKVL +L+EG FE
Sbjct: 112 -DADMQEGASQFKDKVLNILKEGGFE 136
>gi|240102961|ref|YP_002959270.1| dimethyladenosine transferase [Thermococcus gammatolerans EJ3]
gi|259494259|sp|C5A594.1|RSMA_THEGJ RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|239910515|gb|ACS33406.1| Ribosomal RNA adenine methylase transferase (Dimethyladenosine
transferase) (ksgA) [Thermococcus gammatolerans EJ3]
Length = 278
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 148/236 (62%), Gaps = 14/236 (5%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
+++ GQ+ L P ++E V++A + D +LEIGPG G LT +L + V A+E DSRM
Sbjct: 17 NRTLGQNFLIVPDIIERNVKRAELSEKDTVLEIGPGLGVLTDELSKKAGKVYAIEADSRM 76
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRC 150
+ LQR + S P +++I+GD +K + P F+ V+N+PYQISSP+TFKLL H+ F
Sbjct: 77 IEILQREY-SWP---NVELIKGDAVKVEWPEFNKMVSNLPYQISSPVTFKLLKHE--FER 130
Query: 151 AIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIE 210
A++++Q EFA R++A+PGD+ Y RLS+ Q A V + ++G+ F P PKVDS+VV +E
Sbjct: 131 AVLIYQLEFAERMIAKPGDRNYSRLSLMVQAKANVELVERIGRGAFWPRPKVDSAVVVLE 190
Query: 211 PR--KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
P+ K R ++N + ++ F + T++S LK ML + ++++ SS
Sbjct: 191 PKPEKERIELN----ENLVKALFQHRRSTVASA--LKKSAHMLGTDKKSIKDYLSS 240
>gi|390960452|ref|YP_006424286.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Thermococcus
sp. CL1]
gi|390518760|gb|AFL94492.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus sp. CL1]
Length = 272
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 145/235 (61%), Gaps = 9/235 (3%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQ+ L P ++E V++AG+ DV+LE+GPG G LT L V A+E D R+V L
Sbjct: 21 GQNFLVVPDIIERNVERAGLNERDVVLEVGPGLGVLTDALARRAGKVYAIEKDHRLVEIL 80
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+ + + N +++I+GD L+ + P F+ V+N+PYQISSP+TF+ L H F A+++
Sbjct: 81 RSEYD---WEN-VEIIEGDALRVEFPRFNKIVSNLPYQISSPITFRFLKHD--FERAVLI 134
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
+Q EFA R+VA+PGDK Y RLS+ + A + ++G+ F P PKVDS+VV +EP+ P
Sbjct: 135 YQLEFAQRMVAEPGDKNYSRLSLMVRAKAYAELVERIGRGAFWPKPKVDSAVVVLEPKPP 194
Query: 215 RPQVNPVEWDGFLRICF-IRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSS 268
QV E ++ F R++ L+++ + ++L + +++R ++++ SS S
Sbjct: 195 GEQVELNE--NLVKALFQHRRSTVLAALKKSHHMLGLSREDFRKVRSVLSSMPHS 247
>gi|307353999|ref|YP_003895050.1| dimethyladenosine transferase [Methanoplanus petrolearius DSM
11571]
gi|307157232|gb|ADN36612.1| dimethyladenosine transferase [Methanoplanus petrolearius DSM
11571]
Length = 257
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 134/229 (58%), Gaps = 8/229 (3%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L +P + I + IK V LEIGPG G LTK+LLE G VIA+E+D +M+ L
Sbjct: 7 QHFLTDPDAIRKIAHFSDIKDQTV-LEIGPGKGALTKELLERGAKVIAIEIDPKMIEILG 65
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
RF S RL ++ D ++ D P FDI +AN+PY SS +TF+LL H F+ A++M+
Sbjct: 66 SRFADEIDSGRLNLLNEDAVRCDYPDFDIVIANLPYSASSKITFRLLEH--GFKEAVLMY 123
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK-- 213
QKEFA+R++A PG RLSV Q +A+V LL + F PPP VDS VVRI ++
Sbjct: 124 QKEFALRMMALPGTSNCGRLSVMVQTYAKVMPLLNLPPEAFSPPPAVDSMVVRITMKEEL 183
Query: 214 PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML-EKNYRTLQAL 261
P +P + +R F + KTL LK+ S++ EK Y + ++
Sbjct: 184 TYPVDDPEFYSILVRELFSHRRKTLKK--SLKSSRSVIGEKRYERIVSM 230
>gi|91772907|ref|YP_565599.1| dimethyladenosine transferase [Methanococcoides burtonii DSM 6242]
gi|118600877|sp|Q12XH7.1|RSMA_METBU RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|91711922|gb|ABE51849.1| dimethyladenosine transferase [Methanococcoides burtonii DSM 6242]
Length = 270
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 115/177 (64%), Gaps = 5/177 (2%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + ++SIV +A + DV+LEIG G GNLT++LLE V +ELD +V L+
Sbjct: 18 QHFLIDERSLDSIVDQAELSEKDVVLEIGGGIGNLTERLLEKAGKVYVIELDPALVHVLK 77
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
RF + +L++I GDVLK DLP F+ VAN+PY ISSP+TFKL H+ F I+M+
Sbjct: 78 DRFSD---NEKLEIIPGDVLKLDLPKFNKVVANLPYSISSPITFKLFKHE--FELGILMY 132
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR 212
Q EFA R+VA+ + Y RLSVNT A ++K+ + F PPP+V S+VV++ PR
Sbjct: 133 QYEFAQRMVAKANTENYSRLSVNTHYFADADIIMKIPPSAFSPPPEVWSAVVKVVPR 189
>gi|448735320|ref|ZP_21717536.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus salifodinae DSM 8989]
gi|445798658|gb|EMA49055.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus salifodinae DSM 8989]
Length = 295
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 128/238 (53%), Gaps = 3/238 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI +++ QH L + +++ + A T +LEIG GTG LT ++L+ V
Sbjct: 18 LARAGIQPDRNQDQHFLVDDRVLDRLPTYAEGFDTSHVLEIGAGTGALTDRVLDVADRVT 77
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
VE D+R+ L+ F RL +I+GD L DLP F V+N+PY +SS + F+LL
Sbjct: 78 VVERDTRLADFLREEFADACTDGRLDIIEGDALSVDLPEFSASVSNLPYGVSSEVLFRLL 137
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
PA R ++M QKEFA R+VA PG Y RLSV +A + V F PPP V
Sbjct: 138 ---PAKRPLVVMVQKEFAERMVAAPGTDDYGRLSVTVGHYAECEIVETVPPEAFSPPPAV 194
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
+SSVVR PR P ++ + F+R F ++ KT+ + R +S +E+ ++A
Sbjct: 195 ESSVVRASPRDPDYAIDETAFLAFVRAVFTQRRKTVRNAIRNTTHISGIEQPAAVVEA 252
>gi|315230155|ref|YP_004070591.1| dimethyladenosine transferase [Thermococcus barophilus MP]
gi|315183183|gb|ADT83368.1| dimethyladenosine transferase [Thermococcus barophilus MP]
Length = 280
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 136/219 (62%), Gaps = 12/219 (5%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQ+ L +++ V++A IK+ + +LEIGPG G LT +L + K V AVE DSR+V L
Sbjct: 22 GQNFLIVDDIIKREVERAEIKANETVLEIGPGLGFLTDELSKYAKKVYAVEKDSRLVEIL 81
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
Q+ + + N +++I+GD LK + P FD V+N+PYQISSP+TFK L + F+ A+++
Sbjct: 82 QKEYS---WKN-VEIIRGDALKVEFPEFDKIVSNLPYQISSPITFKFLRYD--FKKAVLI 135
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
+Q EFA R+ A+PGDK Y RLSV Q A V + ++G+ F P PKVDS+V+ + P
Sbjct: 136 YQLEFAQRMTAKPGDKNYSRLSVMVQAKADVELVERIGRGAFYPKPKVDSAVIIL---NP 192
Query: 215 RPQVNPVEW-DGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+P+ +E D ++ F + K S LK+ MLE
Sbjct: 193 KPKEEQIELDDSLVKALFQHRRKKASKA--LKDSYHMLE 229
>gi|20090300|ref|NP_616375.1| dimethyladenosine transferase [Methanosarcina acetivorans C2A]
gi|27151576|sp|Q8TQU8.1|RSMA_METAC RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|19915300|gb|AAM04855.1| dimethyladenosine rRNA methyltransferase [Methanosarcina
acetivorans C2A]
Length = 269
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 114/181 (62%), Gaps = 6/181 (3%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + ++ IV A + D ILEIG G GNLT++L K VIAVELD +V L
Sbjct: 18 QHFLIDIGYLDRIVVAAELSPQDTILEIGAGIGNLTERLARRAKKVIAVELDPALVSVLH 77
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
RF ++VI GD LK D P FD V+N+PY ISS +TFKLL ++ F+ I+M+
Sbjct: 78 DRFDKV---ENIEVIAGDALKVDFPEFDKVVSNLPYSISSEITFKLLRYK--FKLGILMY 132
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q EFA R+V+ PG K Y RL+V+T A S L+KV K F+P P+VDS+VV++ PR P
Sbjct: 133 QYEFAARMVSPPGRKDYSRLTVDTYYFADASILMKVPKGAFQPAPEVDSAVVKLVPR-PS 191
Query: 216 P 216
P
Sbjct: 192 P 192
>gi|27151572|sp|Q8PU18.2|RSMA_METMA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
Length = 271
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + ++ IV A + D +LEIG G GNLT++L K VIAVELD +V L
Sbjct: 18 QHFLIDAGYLDRIVAAAELSPQDTVLEIGAGIGNLTERLARRAKKVIAVELDPALVSVLH 77
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
RF + + +++I GD LK D P FD V+N+PY ISS +TFKLL H+ F+ ++M+
Sbjct: 78 DRFDA---AENIEIIAGDALKVDFPEFDKVVSNLPYSISSEITFKLLRHK--FKLGVLMY 132
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q EFA+R+V+ PG K Y RL+++T A S ++KV K F+P P+VDS+V+++ PR P
Sbjct: 133 QYEFAVRMVSPPGCKDYSRLTIDTCYFADASIVMKVPKGAFQPAPEVDSAVIKLIPR-PA 191
Query: 216 P 216
P
Sbjct: 192 P 192
>gi|389853158|ref|YP_006355392.1| dimethyladenosine transferase [Pyrococcus sp. ST04]
gi|388250464|gb|AFK23317.1| putative dimethyladenosine transferase [Pyrococcus sp. ST04]
Length = 274
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 14/209 (6%)
Query: 40 KNPLLVESIVQKA----GIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
+N L+VE+I+ KA + D++LE+GPG G LT KL E K V A+E+D R+V L+
Sbjct: 22 QNFLIVENIIDKAVEVAEVDKNDIVLEVGPGLGFLTNKLSERAKKVYAIEVDRRIVEILE 81
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
+ + N +++I GD +K P F+ V+N+PYQISSP TFKLL H+ F A++M+
Sbjct: 82 KEYNW----NNVEIIVGDAVKVPWPEFNKVVSNLPYQISSPFTFKLLKHE--FEKAVLMY 135
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q EFA+R+ A+PG + Y RLS+ Q A V ++K+G+ F P PKVDS++V I KP+
Sbjct: 136 QLEFALRMTAKPGSRNYSRLSLMVQALADVEIIMKIGRGAFYPRPKVDSALVLI---KPK 192
Query: 216 PQVNPVEW-DGFLRICFIRKNKTLSSIFR 243
P +E + ++ F + K +S R
Sbjct: 193 PSEERIELNEDLVKALFQHRRKLVSKALR 221
>gi|119571769|gb|EAW51384.1| dimethyladenosine transferase, isoform CRA_a [Homo sapiens]
Length = 152
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 88/110 (80%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
AGG+ F+ GQHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A
Sbjct: 25 AGGLMFNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVAC 84
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQIS 134
ELD R+V EL +R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQ+
Sbjct: 85 ELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQVC 134
>gi|57640834|ref|YP_183312.1| dimethyladenosine transferase [Thermococcus kodakarensis KOD1]
gi|62900463|sp|Q5JI54.1|RSMA_PYRKO RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|57159158|dbj|BAD85088.1| dimethyladenosine transferase [Thermococcus kodakarensis KOD1]
Length = 279
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 131/209 (62%), Gaps = 8/209 (3%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQ+ L P ++E +++A + D +LEIGPG G LT L + V A+E D R+V E+
Sbjct: 21 GQNFLIVPDIIERNIERAEVGEKDTVLEIGPGLGVLTDPLSKRAGKVYAIEKDCRIV-EI 79
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
RR + P +++I+GD LK + P F+ V+N+PYQISSP+TFKLL + F A+++
Sbjct: 80 LRREYNWP---NVEIIEGDALKVEWPEFNKMVSNLPYQISSPVTFKLLSRE--FERAVLI 134
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQ EFA R+VA+PGDK Y RLS+ + AR + ++GK F P PKVDS+VV +EP+ P
Sbjct: 135 FQLEFAERMVAKPGDKNYSRLSLMVRAKARAELVERIGKGAFWPRPKVDSAVVVLEPKPP 194
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+++ E ++ F + T+S+ +
Sbjct: 195 EERIDLNE--NLVKALFQHRRSTVSAALK 221
>gi|73670681|ref|YP_306696.1| dimethyladenosine transferase [Methanosarcina barkeri str. Fusaro]
gi|118600876|sp|Q466S6.1|RSMA_METBF RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|72397843|gb|AAZ72116.1| dimethyladenosine transferase [Methanosarcina barkeri str. Fusaro]
Length = 287
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + ++ IV A + DV+LEIG G GNLT++L + K VIA+ELD +V L
Sbjct: 28 QHFLVDAGYLDRIVAAAELGPKDVVLEIGAGVGNLTERLAKKVKKVIAIELDPVLVRVLH 87
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
RF +++I GD LK + P FD V+N+PY ISS +TFKLL H+ F+ I+M+
Sbjct: 88 DRFDKV---GNIEIIAGDALKVEFPEFDKIVSNLPYSISSEITFKLLRHK--FKLGILMY 142
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q EFA R+V+QP K Y RL+V+T A S L+KV K+ F+P P+VDS+V+++ PR P
Sbjct: 143 QYEFAARMVSQPNCKDYSRLTVDTCYFADASILMKVPKSAFQPAPEVDSAVIKLVPR-PV 201
Query: 216 P 216
P
Sbjct: 202 P 202
>gi|301101445|ref|XP_002899811.1| dimethyladenosine transferase, putative [Phytophthora infestans
T30-4]
gi|262102813|gb|EEY60865.1| dimethyladenosine transferase, putative [Phytophthora infestans
T30-4]
Length = 349
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 139/245 (56%), Gaps = 29/245 (11%)
Query: 35 GQHILKNPLLVESIVQKAGIKS----TDVILEIGPGTGNLTKKLLEAG-KM-VIAVELDS 88
GQH+L + +++ IV + + T +LEIGPGTGNLT LL+ KM V AVE D
Sbjct: 41 GQHLLVSDGILDQIVAASELSDICSDTVRVLEIGPGTGNLTSTLLQVSPKMQVHAVEFDP 100
Query: 89 RMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY-------------FDICVANIPYQISS 135
RMV +L+ RF + S L + D D + F+ CVANIPYQ+SS
Sbjct: 101 RMVEQLKLRFPTEIESGSLVLEHSDF--EDFRFVPDQKQETNQEKIFNACVANIPYQLSS 158
Query: 136 PLTFKL--LFHQ--PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
+ +L H+ F+CA+++ Q+EFA RL+A+PG+K Y RLS NT L A V+ + KV
Sbjct: 159 IVVSRLSNYMHRFPKTFKCAVLLVQEEFASRLLAEPGNKSYSRLSANTALVANVTSVAKV 218
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVE----WDGFLRICFIRKNKTLSSIFRLKNV 247
+ +F PPPKVDS V+++ PR + + +D LR+CF RKNKTL ++ K
Sbjct: 219 PREHFLPPPKVDSRVIKLVPRAAALPSHDEQFFQKFDALLRLCFERKNKTLRALLLAKTA 278
Query: 248 LSMLE 252
S E
Sbjct: 279 RSQYE 283
>gi|254167515|ref|ZP_04874367.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
gi|197623778|gb|EDY36341.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
Length = 238
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 127/208 (61%), Gaps = 4/208 (1%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
Q+ L NP + + IV++A IK D++LEIGPG G LT KLLE + V A+E+D + L
Sbjct: 5 SQNFLINPKIADYIVKEAEIKPDDIVLEIGPGKGILTDKLLEKCE-VYAIEIDKTLCEYL 63
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
FQ + RL +I GD LK D P F+ VANIPY ISSPL FK+L ++ F I+M
Sbjct: 64 SIIFQDYIKNGRLHLICGDALKVDFPKFNKIVANIPYHISSPLLFKILEYE--FERGILM 121
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
Q EFA RLVA+PG K Y RLSV + L +V + NF+P P+VDS++V+I +K
Sbjct: 122 LQYEFAERLVAKPGSKRYGRLSVMMYYNGEARILKRVKRGNFKPVPRVDSAIVKI-TKKD 180
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIF 242
R + + + F+R F ++ K + +I
Sbjct: 181 RFCYDKDKLNEFVRKLFEQRRKKIRNIL 208
>gi|350525713|ref|YP_004885360.1| Dimethyladenosine transferase [Thermococcus sp. AM4]
gi|345650532|gb|AEO13922.1| Dimethyladenosine transferase [Thermococcus sp. AM4]
Length = 283
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 134/214 (62%), Gaps = 10/214 (4%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
+++ GQ+ L P ++E V++A + D +LEIGPG G LT +L V A+E D+RM
Sbjct: 17 NRNLGQNFLIVPDIIERNVERAELSERDTVLEIGPGLGVLTDELSRRAGKVYAIEADNRM 76
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRC 150
+ E+ R+ S P +++I+GD +K D P F+ V+N+PYQISSP+TFKLL F
Sbjct: 77 I-EILRKEYSWP---NVELIEGDAVKVDWPEFNKMVSNLPYQISSPVTFKLLRRD--FER 130
Query: 151 AIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIE 210
A++++Q EFA R++A+PGDK Y RLS+ Q A V + ++G+ F P PKVDS+VV I+
Sbjct: 131 AVLIYQLEFAERMIARPGDKNYSRLSLMVQAKASVELVERIGRGAFWPRPKVDSAVVLIQ 190
Query: 211 PRKPRPQVNPVEW-DGFLRICFIRKNKTLSSIFR 243
P+P+ +E + ++ F + T+SS R
Sbjct: 191 ---PKPKEERIELNENLVKALFQHRRSTVSSALR 221
>gi|399576680|ref|ZP_10770435.1| dimethyladenosine transferase [Halogranum salarium B-1]
gi|399238124|gb|EJN59053.1| dimethyladenosine transferase [Halogranum salarium B-1]
Length = 298
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 137/256 (53%), Gaps = 34/256 (13%)
Query: 35 GQHILKNPLLVESIVQKAGIK---------------------------STDVILEIGPGT 67
G+ L+NP ++++++AG++ T ILE+GPGT
Sbjct: 13 GERTLRNP---DALIRRAGLRGDPDQDQHFLVDDRVLDRVPTYLPDDADTSHILEVGPGT 69
Query: 68 GNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVA 127
G LT +LL V VE D R+ L+R F + L +++GD L+ DLP F CVA
Sbjct: 70 GALTDRLLALADHVTVVERDVRLADFLRREFADDIEAGDLTILEGDALEVDLPDFTACVA 129
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PY ISS +TF+LL P + ++MFQKEFA R+ A+ Y RLSV+ Q +A +
Sbjct: 130 NLPYGISSEITFRLL---PEGKPLVLMFQKEFAERMAAESATDAYGRLSVSAQHYADIEV 186
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFRLKN 246
+ V F PPP VDS+VVR PR P +V +P + F++ F ++ KT+ + R
Sbjct: 187 VEPVPPTAFSPPPAVDSAVVRTTPRDPDYEVDDPEFFLDFVKALFTQRRKTIRNGIRNTT 246
Query: 247 VLSMLEKNYRTLQALQ 262
++ +E R ++A++
Sbjct: 247 HITGIEHPERVIEAVE 262
>gi|254166890|ref|ZP_04873744.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
gi|197624500|gb|EDY37061.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
Length = 238
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
Q+ L NP + + IV++A IK D++LEIGPG G LT KLLE + V A+E+D + L
Sbjct: 5 SQNFLINPKIADYIVKEAEIKPNDIVLEIGPGKGILTGKLLEKCE-VYAIEIDKTLCEYL 63
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
FQ RL +I GD LK + P F+ VANIPY ISSPL FK+L ++ F I+M
Sbjct: 64 NIIFQDDIKDGRLHLICGDALKVNFPKFNKIVANIPYHISSPLLFKILEYE--FERGILM 121
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
Q EFA RLVA+PG K Y RLSV + L +V + NFRP P+VDS++V+I +K
Sbjct: 122 LQYEFAERLVAKPGSKRYGRLSVMMYYNGEARILKRVKRGNFRPVPRVDSAIVKI-TKKD 180
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIF 242
R + + + F+R F ++ K + +I
Sbjct: 181 RFCYDKDKLNEFVRKLFEQRRKKIRNIL 208
>gi|289596434|ref|YP_003483130.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
gi|289534221|gb|ADD08568.1| dimethyladenosine transferase [Aciduliprofundum boonei T469]
Length = 243
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
Q+ L NP + + IV++A IK D++LEIGPG G LT KLLE + V A+E+D + L
Sbjct: 10 SQNFLINPKIADYIVKEAEIKPNDIVLEIGPGKGILTGKLLEKCE-VYAIEIDKTLCEYL 68
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
FQ RL +I GD LK + P F+ VANIPY ISSPL FK+L ++ F I+M
Sbjct: 69 NIIFQDDIKDGRLHLICGDALKVNFPKFNKIVANIPYHISSPLLFKILEYE--FERGILM 126
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
Q EFA RLVA+PG K Y RLSV + L +V + NFRP P+VDS++V+I +K
Sbjct: 127 LQYEFAERLVAKPGSKRYGRLSVMMYYNGEARILKRVKRGNFRPVPRVDSAIVKI-TKKD 185
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIF 242
R + + + F+R F ++ K + +I
Sbjct: 186 RFCYDKDKLNEFVRKLFEQRRKKIRNIL 213
>gi|336477201|ref|YP_004616342.1| dimethyladenosine transferase [Methanosalsum zhilinae DSM 4017]
gi|335930582|gb|AEH61123.1| dimethyladenosine transferase [Methanosalsum zhilinae DSM 4017]
Length = 271
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 126/209 (60%), Gaps = 6/209 (2%)
Query: 33 SKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVL 92
S QH L + ++E I++++ I DV+LEIG G GNLT+K+ K IA+ELD +V
Sbjct: 15 SHDQHFLVDNRILERIIEESRIGPEDVVLEIGAGVGNLTEKIASKAKKTIAIELDPNLVD 74
Query: 93 ELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAI 152
L RF +++I GDVL+ + P F+ VAN+PY ISSP+TFKLL + F +
Sbjct: 75 VLHDRFGD---HEEIQIISGDVLEVEFPPFNKVVANLPYSISSPVTFKLLRYD--FDLGV 129
Query: 153 IMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR 212
+M+Q EFA R+VA G + Y RLSV TQ +A ++K+ + F PPPKV S+VV++ PR
Sbjct: 130 LMYQYEFARRMVACTGSEDYSRLSVATQYYADAEIIMKIPASAFSPPPKVMSAVVKLVPR 189
Query: 213 K-PRPQVNPVEWDGFLRICFIRKNKTLSS 240
P V+ + F+ F ++ K L +
Sbjct: 190 PFPYKVVDESFFFKFITAVFGQRRKKLKN 218
>gi|448303158|ref|ZP_21493108.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronorubrum sulfidifaciens JCM 14089]
gi|445594165|gb|ELY48332.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronorubrum sulfidifaciens JCM 14089]
Length = 280
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 133/243 (54%), Gaps = 10/243 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKM 80
+ G+ + QH L + +++ + D +LEIG GTG LT +LLE
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLTALDADTSHLLEIGGGTGVLTDRLLEIADE 67
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V VE D + L F + L VI+GD L+ +LP F V+N+PY +SS +TF+
Sbjct: 68 VTVVERDRELAAFLTEEFADEVAAGELTVIEGDALEVELPDFTASVSNLPYGVSSEITFR 127
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL P R ++MFQ+EFA R+VA+PG Y RLSV+TQ +A + + K F PPP
Sbjct: 128 LL---PEGRPLVLMFQQEFAERMVAEPGTAEYGRLSVSTQHYADAELVESIPKEAFSPPP 184
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFRLKNVLSMLEKNYRT 257
V S+VVR+EPR+P +V+ + D FLR F ++ KT+ + R +S LE+
Sbjct: 185 AVQSAVVRLEPREPEYEVD--DEDFFLRFVKALFTQRRKTIRNAIRNTAHISGLEEPDAV 242
Query: 258 LQA 260
++A
Sbjct: 243 VEA 245
>gi|126179901|ref|YP_001047866.1| dimethyladenosine transferase [Methanoculleus marisnigri JR1]
gi|125862695|gb|ABN57884.1| dimethyladenosine transferase [Methanoculleus marisnigri JR1]
Length = 257
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLE 93
+ QH L + VE I + V LEIGPG G LT+ LL+ VIAVE+D +V E
Sbjct: 5 RDQHFLVDRRAVEKIAGFVDVSGRRV-LEIGPGEGILTRALLDRDADVIAVEIDPALVEE 63
Query: 94 LQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAII 153
L+ F RL++I+GD K D+P F+I VAN+PY +SS +TF+LL + F A++
Sbjct: 64 LEIAFADEIGEGRLEIIRGDAKKVDIPPFEIVVANLPYSVSSKITFRLL--EIGFEVAVL 121
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
M+QKEFA R+VA PG RLSV Q +A V LL++G +FRP P V S VVRI P +
Sbjct: 122 MYQKEFARRMVAPPGTPNVGRLSVMVQTYASVKPLLELGPGSFRPQPAVRSWVVRITPHE 181
Query: 214 -PRPQVNPVEWDGFLRICFIRKNKTL 238
P P + + +R+ F + KT+
Sbjct: 182 PPYPIADRRVYADVVRVLFSHRRKTV 207
>gi|397779474|ref|YP_006543947.1| dimethyladenosine transferase [Methanoculleus bourgensis MS2]
gi|396937976|emb|CCJ35231.1| dimethyladenosine transferase [Methanoculleus bourgensis MS2]
Length = 266
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 122/211 (57%), Gaps = 4/211 (1%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLE 93
+ QH L + VE I + V LEIGPG G LT+ LL+ G V+AVE+D +V E
Sbjct: 5 RDQHFLVDQRAVEKIAGFVDVSGRRV-LEIGPGEGVLTRALLDRGATVVAVEVDPALVEE 63
Query: 94 LQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAII 153
L+ F L+++ GD K D P FDI VAN+PY SS +TF+LL + F A++
Sbjct: 64 LEFLFADEIAEGCLQLVPGDATKVDFPPFDIVVANLPYSASSKITFRLL--ESGFEVAVL 121
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
M+QKEFA R++A+PG RLSV Q +A V LL++ N+FRP P+V S VVRI P +
Sbjct: 122 MYQKEFARRMIARPGKPGVGRLSVMVQTYASVKPLLELSPNSFRPKPQVRSWVVRITPHE 181
Query: 214 -PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
P P + + +R+ F + KT+ R
Sbjct: 182 PPYPLADRGVYADVVRVLFSYRRKTVRKALR 212
>gi|448313719|ref|ZP_21503432.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronolimnobius innermongolicus JCM 12255]
gi|445597652|gb|ELY51726.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronolimnobius innermongolicus JCM 12255]
Length = 363
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 139/269 (51%), Gaps = 17/269 (6%)
Query: 4 GKIRKEKGKQKSGPYQGQGL-------GAGGISFHKSKGQHILKNPLLVESIVQKAGIKS 56
G R+ G GP Q + + G+ + QH L + +++ +
Sbjct: 65 GASRRRDGAFTPGPTQTRAMRDPDGLIARAGVRGDPDRDQHFLVDDRVLDRLPTYLTEID 124
Query: 57 TDV--ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV 114
D +LEIG GTG LT +LL V VE D ++ L+ F + RL VI+GD
Sbjct: 125 ADTSHLLEIGGGTGALTDRLLAIADEVTVVERDRKLAAFLEAEFADEIDAGRLTVIEGDA 184
Query: 115 LKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCR 174
L+ LP F V+N+PY +SS +TF+LL P R ++MFQ+EFA R+VAQPG Y R
Sbjct: 185 LEVALPDFTASVSNLPYGVSSEITFRLL---PEQRPLVLMFQQEFAERMVAQPGTSEYGR 241
Query: 175 LSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---F 231
LSV+TQ +A + + K F PPP V S+VVR+EPR P +V+ + FLR F
Sbjct: 242 LSVSTQHYADAELVESIPKEAFSPPPAVQSAVVRLEPRAPDYEVDDEAF--FLRFVKALF 299
Query: 232 IRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
++ KT+ + R +S LE ++A
Sbjct: 300 TQRRKTIRNAIRNTAHISGLEAPDAVVEA 328
>gi|448728187|ref|ZP_21710518.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus saccharolyticus DSM 5350]
gi|445797405|gb|EMA47880.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus saccharolyticus DSM 5350]
Length = 295
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 130/238 (54%), Gaps = 3/238 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI +++ QH L + +++ + A T +LEIG GTG LT +LL+ V
Sbjct: 18 LARAGIQPDRNQDQHFLVDDRVLDRLPTYAEAFDTSHVLEIGAGTGALTDRLLDTADRVT 77
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
A+E D+R+ L+ F RL V++G+ L ++P F + V+N+PY +SS + F+LL
Sbjct: 78 AIERDARLADFLREEFADACADGRLDVVEGNALSLEIPEFSVSVSNLPYGVSSEVLFRLL 137
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
PA R +IM Q+EFA R+VA PG Y RLSV +A + V F PPP V
Sbjct: 138 ---PAKRPLVIMVQREFAERMVAAPGTDDYGRLSVTVGHYAECEIVETVPPEAFSPPPAV 194
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
+S++VR P P ++ + + F+R F ++ KT+ + R +S +E+ ++A
Sbjct: 195 ESAIVRTSPCDPDYAIDEMAFLAFVRAVFTQRRKTVRNAIRNTTHISEIEQPAAVVEA 252
>gi|409722690|ref|ZP_11270110.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus hamelinensis 100A6]
gi|448723183|ref|ZP_21705708.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus hamelinensis 100A6]
gi|445788138|gb|EMA38860.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus hamelinensis 100A6]
Length = 284
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 120/221 (54%), Gaps = 3/221 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G+ +++ QH L + +++ + + A T +LE+G GTG LT +LL + V
Sbjct: 17 LARAGVRGDRNQDQHFLVDDRVLDRLPEYATAFDTSHVLEVGAGTGGLTDRLLADAERVT 76
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
AVE D R+V L+ F + RL V+ GD L DLP F V+N+PY SS L F+LL
Sbjct: 77 AVERDVRLVEFLREEFAGAVDAGRLDVVAGDALDVDLPEFSASVSNLPYGSSSELLFRLL 136
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
P R ++M Q EFA R+VA PG Y RLSV +A + +V + F PPP V
Sbjct: 137 ---PRERPLVVMVQAEFAERMVADPGSSEYGRLSVTAGHYADAEIVERVPREAFSPPPAV 193
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+S+VVR PR P V + F+R F ++ KT+ + R
Sbjct: 194 ESAVVRTTPRDPDYDVPEDAFFAFVRGVFTQRRKTMRNAIR 234
>gi|290561427|gb|ADD38114.1| Probable dimethyladenosine transferase [Lepeophtheirus salmonis]
Length = 186
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 103/192 (53%), Gaps = 46/192 (23%)
Query: 167 PGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGF 226
PGDKLYCRLS+NTQL + V HLLKVGKNNFRPPPKV+SSVVRIEP+ P P +N EWDG
Sbjct: 40 PGDKLYCRLSINTQLLSTVHHLLKVGKNNFRPPPKVESSVVRIEPKNPPPPINFKEWDGL 99
Query: 227 LRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNG 286
RICF+RKNKTL + F VL L+KNYRT +L+
Sbjct: 100 TRICFVRKNKTLGAAFSQTPVLLTLDKNYRTHMSLK------------------------ 135
Query: 287 DQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLY 346
+EM E+ K+ ++ VL F EKR + +F+
Sbjct: 136 -----------EEMLPEE-----------FSIKELIVDVLESIDFTEKRPRTMDIDDFMK 173
Query: 347 LLSLFNKAGIHF 358
L+ FN G+HF
Sbjct: 174 LMHAFNSVGVHF 185
>gi|448300555|ref|ZP_21490554.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronorubrum tibetense GA33]
gi|445585374|gb|ELY39669.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronorubrum tibetense GA33]
Length = 301
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 139/264 (52%), Gaps = 31/264 (11%)
Query: 23 LGAGGISFHKSKGQHILKN-------PLLVESIVQKAGIKS-------------TDVILE 62
+ G+ + QH L + P +ES Q+A ++ T +LE
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLESEAQRASDEASGDSPRADEIDADTSHLLE 67
Query: 63 IGPGTGNLTKKLLEAGKM---VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
IG GTG LT +LL G V VE D ++ LQ F+ + RL VI+GD L+ DL
Sbjct: 68 IGGGTGALTDRLLAMGDEDDEVTVVERDRKLAGFLQEEFREEIDAGRLTVIEGDALEVDL 127
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P F V+N+PY +SS +TF+LL P R ++MFQ+EFA R+VA PG Y RLSV+T
Sbjct: 128 PDFTASVSNLPYGVSSEITFRLL---PEKRPLVLMFQQEFAERMVAGPGTPEYGRLSVST 184
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNK 236
Q +A + + K F PPP V S+VVR+EPR P +V+ + D FLR F ++ K
Sbjct: 185 QHYADAELVESIPKEAFSPPPAVQSAVVRLEPRDPDYEVD--DEDFFLRFVKALFTQRRK 242
Query: 237 TLSSIFRLKNVLSMLEKNYRTLQA 260
T+ + R +S LE ++A
Sbjct: 243 TIRNGIRNTAHISGLEAPDAVVEA 266
>gi|212223555|ref|YP_002306791.1| dimethyladenosine transferase [Thermococcus onnurineus NA1]
gi|226732633|sp|B6YTK7.1|RSMA_THEON RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|212008512|gb|ACJ15894.1| dimethyladenosine transferase [Thermococcus onnurineus NA1]
Length = 272
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 135/217 (62%), Gaps = 8/217 (3%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ + GQ+ L ++E V++A + DV+LEIGPG G LT L + V A+E
Sbjct: 13 GLRANSDLGQNFLIVDDIIERNVERAELSGRDVVLEIGPGLGVLTDALSKRAGKVYAIEK 72
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D R+V L++ + +SN +++I+GD LK D P F+ V+N+PYQISSP+TF+ L +
Sbjct: 73 DPRLVEILRKEYN---WSN-VEIIEGDALKVDFPEFNKIVSNLPYQISSPITFRFLGY-- 126
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F A++++Q EFA R+VA+PGD+ Y RLS+ Q + V + ++G+ F P PKVDS+V
Sbjct: 127 GFERAVLIYQLEFAQRMVARPGDRNYSRLSLMVQAKSYVELVERIGRGAFYPRPKVDSAV 186
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+ +EP KP+ +V + D +R F + T+++ +
Sbjct: 187 IVLEP-KPKSEVIELNED-LVRALFQHRRSTVAAALK 221
>gi|11499372|ref|NP_070611.1| dimethyladenosine transferase [Archaeoglobus fulgidus DSM 4304]
gi|27151555|sp|O28491.1|RSMA_ARCFU RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|2648762|gb|AAB89464.1| dimethyladenosine transferase (ksgA) [Archaeoglobus fulgidus DSM
4304]
Length = 244
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 125/217 (57%), Gaps = 14/217 (6%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
+ KS GQH+L + ++ IV A + DV+LE+G GTGNLT LL V+ +E D
Sbjct: 1 MKLRKSLGQHMLVDRRVISRIVGYAELSEDDVVLEVGCGTGNLTSALLRKCS-VVGIEKD 59
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPA 147
MV L+ RF R ++IQGD LK D PYF VANIPY+ISSPLTFKLL +
Sbjct: 60 PLMVKRLRERFSDFIGKGRFRLIQGDALKVDFPYFTKFVANIPYKISSPLTFKLL--KTD 117
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
FR A++M+Q+EFA RL + RL V ++ + + L V ++F PPPKV+S++V
Sbjct: 118 FRLAVVMYQREFAERLCGEDN-----RLGVISKTYCKAEILEIVKPSSFNPPPKVESAIV 172
Query: 208 RIEPRKPRPQV---NPVEWDGFLRICFIRKNKTLSSI 241
RI P P+V N ++ F+ F + K + I
Sbjct: 173 RI---VPEPEVFVENRELFEKFVTFAFSMRRKRMGKI 206
>gi|325957949|ref|YP_004289415.1| ribosomal RNA small subunit methyltransferase A [Methanobacterium
sp. AL-21]
gi|325329381|gb|ADZ08443.1| Ribosomal RNA small subunit methyltransferase A [Methanobacterium
sp. AL-21]
Length = 273
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 116/190 (61%), Gaps = 3/190 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI K KGQ+ L N ++ I+Q + + D +LEIG G G LT L + V
Sbjct: 9 LKQNGIKLDKRKGQNYLVNRDILSKIIQNSELSKNDRVLEIGAGIGTLTIPLAKNAGKVY 68
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
AVE D + L++R + N ++VI D K DLP + ++N+PYQISSP+TFK+L
Sbjct: 69 AVEQDGKAANVLKKRLEKLELDN-VEVIVEDATKMDLPSVNKVISNLPYQISSPITFKIL 127
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+QKEFA R+VA PGD+ Y RLSV L++ L +V +N+F P PKV
Sbjct: 128 --ENPFEMAVLMYQKEFAQRMVASPGDRNYSRLSVMMYLYSEAEILFQVSENDFFPKPKV 185
Query: 203 DSSVVRIEPR 212
S+V++++P+
Sbjct: 186 ASAVIKMQPK 195
>gi|448409534|ref|ZP_21574748.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halosimplex carlsbadense 2-9-1]
gi|445672880|gb|ELZ25449.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halosimplex carlsbadense 2-9-1]
Length = 306
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 138/257 (53%), Gaps = 17/257 (6%)
Query: 1 MAGGKIRKEKGK------QKSGPYQGQG-----LGAGGISFHKSKGQHILKNPLLVESIV 49
M G + R+ +G+ ++ P G L G+ ++ QH L + +++ +
Sbjct: 1 MNGERTRESEGESNGATPRRDAPETGARDPDALLRRAGVRGDPNRDQHFLVDDRVLDRLP 60
Query: 50 QKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRL 107
+ A + D+ +LEIG GTG LT +LL AG+ V A+E D + L+ F + RL
Sbjct: 61 EYAAEANVDLSHVLEIGAGTGALTDRLLAAGERVTAIERDPDLAAFLRDEFAAEIDDGRL 120
Query: 108 KVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQP 167
V++GD L+ +LP F V+N+PY SS L F+LL P R ++MFQ+EFA R+ A+P
Sbjct: 121 TVVEGDALEVELPEFTASVSNLPYGPSSELAFRLL---PEKRPLVLMFQREFAERMAAEP 177
Query: 168 GDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVE-WDGF 226
G Y RLSV +A + V K F PPP V S+VVR PR P +V+ + + F
Sbjct: 178 GTDDYGRLSVTAGHYADAEVVEPVPKEAFSPPPAVQSAVVRTTPRDPDYEVDDEDFFMAF 237
Query: 227 LRICFIRKNKTLSSIFR 243
L+ F ++ KT+ + R
Sbjct: 238 LKAVFTQRRKTMRNAVR 254
>gi|410671970|ref|YP_006924341.1| dimethyladenosine transferase [Methanolobus psychrophilus R15]
gi|409171098|gb|AFV24973.1| dimethyladenosine transferase [Methanolobus psychrophilus R15]
Length = 270
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 131/217 (60%), Gaps = 7/217 (3%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + +++ IV A I+ + ILEIG G GNLT++L++ VIA+E D +V L
Sbjct: 18 QHFLVDERILDRIVDAADIRPHETILEIGAGIGNLTERLMKRAGKVIAIERDPVLVDVLL 77
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
RF +++L++I GDVL+ + P FD V+N+PY ISS +TFKL H+ F I+M+
Sbjct: 78 DRFGE---NDKLEIIAGDVLEVEFPPFDKVVSNLPYSISSEITFKLFRHE--FELGILMY 132
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q EFA R+VA Y RLSVNT A S ++++ + F PPP+V S+VVR++PR
Sbjct: 133 QYEFAQRMVAHANSGDYSRLSVNTYYFADTSIIMEIPRRAFSPPPEVLSAVVRVKPRPSP 192
Query: 216 PQVNPVEW--DGFLRICFIRKNKTLSSIFRLKNVLSM 250
+V+ ++ D + R+ K +SI R K +L +
Sbjct: 193 FKVDDRKYYLDFVTAVFGQRRKKIRNSIIRNKQLLGI 229
>gi|242398592|ref|YP_002994016.1| Probable dimethyladenosine transferase [Thermococcus sibiricus MM
739]
gi|259494260|sp|C6A222.1|RSMA_THESM RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|242264985|gb|ACS89667.1| Probable dimethyladenosine transferase [Thermococcus sibiricus MM
739]
Length = 273
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 122/184 (66%), Gaps = 6/184 (3%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQ+ L +++ V++A IK+++ ILEIGPG G LT +L + V A+E DSR++ L
Sbjct: 21 GQNFLIVGDVIKREVERAEIKNSETILEIGPGLGVLTDELAKRAGKVYAIEKDSRIIEIL 80
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
++ + +SN ++++QGD LK P F+ V+N+PYQISSP+TFKLL + F A+++
Sbjct: 81 KKEYN---WSN-VEIMQGDALKIKFPEFNKVVSNLPYQISSPITFKLLKYD--FERAVLI 134
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
+Q EFA R+VA+PGDK Y RLSV Q V + ++G+ F P PKVDS+V+ +EP+
Sbjct: 135 YQLEFAQRMVAKPGDKNYSRLSVMVQAKVNVDLVERIGRGAFYPKPKVDSAVIVMEPKPK 194
Query: 215 RPQV 218
Q+
Sbjct: 195 DEQI 198
>gi|448309394|ref|ZP_21499255.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronorubrum bangense JCM 10635]
gi|445590699|gb|ELY44912.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronorubrum bangense JCM 10635]
Length = 280
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 133/243 (54%), Gaps = 10/243 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKM 80
+ G+ + QH L + +++ + D +LEIG GTG LT +LLE
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLPELDADTTHLLEIGGGTGVLTDRLLEIADE 67
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V VE D + L+ F RL VI+GD L+ +LP F V+N+PY +SS +TF+
Sbjct: 68 VTVVERDRTLAAFLREEFADEIAVGRLTVIEGDALEVELPPFTASVSNLPYGVSSEITFR 127
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL P R ++MFQ+EFA R+VA+PG Y RLSV+TQ +A + + K F PPP
Sbjct: 128 LL---PEQRPLVLMFQQEFAERMVAEPGTPEYGRLSVSTQHYADAELVESIPKEAFSPPP 184
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFRLKNVLSMLEKNYRT 257
V S+VVR+EPR P +V+ E+ FLR F ++ KT+ + R +S LE+
Sbjct: 185 AVQSAVVRLEPRDPDYEVDDEEF--FLRFVKALFTQRRKTIRNAIRNTAHISGLEEPDAV 242
Query: 258 LQA 260
++A
Sbjct: 243 VEA 245
>gi|383621692|ref|ZP_09948098.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halobiforma lacisalsi AJ5]
gi|448702544|ref|ZP_21699977.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halobiforma lacisalsi AJ5]
gi|445777105|gb|EMA28075.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halobiforma lacisalsi AJ5]
Length = 279
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 126/231 (54%), Gaps = 20/231 (8%)
Query: 23 LGAGGISFHKSKGQHILKN-------PLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLL 75
+ G+ + QH L + P +E I + T+ +LEIG GTG LT +LL
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLEEIDAE-----TNHLLEIGGGTGALTDRLL 62
Query: 76 EAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISS 135
+ G V VE D + L+ F + RL VI+GD L+ DLP F V+N+PY +SS
Sbjct: 63 DLGDEVTVVERDPDLAAFLREEFADAIDNGRLTVIEGDALEVDLPDFTASVSNLPYGVSS 122
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
+TF+LL P R ++MFQ+EFA R+VA PG Y RLSV+TQ +A V + V K
Sbjct: 123 EITFRLL---PEGRPLVLMFQQEFAERMVADPGTSEYGRLSVSTQHYADVELVETVPKEA 179
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFR 243
F PPP V+S+VVR PR P V + D FLR F ++ KT+ + R
Sbjct: 180 FSPPPAVESAVVRAVPRDPEYDV--ADEDFFLRFVKALFTQRRKTIRNGIR 228
>gi|288930669|ref|YP_003434729.1| dimethyladenosine transferase [Ferroglobus placidus DSM 10642]
gi|288892917|gb|ADC64454.1| dimethyladenosine transferase [Ferroglobus placidus DSM 10642]
Length = 248
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 5/212 (2%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KS+ QHILK+ ++ IV A ++ DV+LE+G G GNLT LL+ K V +E D R V
Sbjct: 5 KSRDQHILKDKRYLKKIVSVAEVRD-DVVLEVGCGPGNLTSLLLKKAKKVYGIEKDRRFV 63
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+++F +L++I+GD LK + P D V+NIP+ ISSPLTFK+L H F+ +
Sbjct: 64 ELLKKKFSGYIEEGKLEIIEGDALKVEFPECDKFVSNIPFSISSPLTFKVLKH--GFKLS 121
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++ +QKEFA RLVA+ G K Y RLSV + + + + + + F+P PKVD+++V+I
Sbjct: 122 VVTYQKEFAERLVAREGSKKYGRLSVIAKAYCKAEIVDIIPRYAFKPVPKVDAAIVKI-V 180
Query: 212 RKPRPQVNPVE-WDGFLRICFIRKNKTLSSIF 242
+P +V +E ++ + F R+ K S I
Sbjct: 181 HEPEIKVENLEVFEDLVTFVFSRRRKKFSKIL 212
>gi|18978235|ref|NP_579592.1| dimethyladenosine transferase [Pyrococcus furiosus DSM 3638]
gi|397652488|ref|YP_006493069.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Pyrococcus
furiosus COM1]
gi|27151575|sp|Q8TH24.1|RSMA_PYRFU RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|18894050|gb|AAL81987.1| dimethyladenosine transferase (s-adenosylmethionine-6-n'
[Pyrococcus furiosus DSM 3638]
gi|393190079|gb|AFN04777.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pyrococcus furiosus COM1]
Length = 273
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 139/231 (60%), Gaps = 14/231 (6%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQ+ L ++ V+ + IK +DV+LE+GPG G LT +L + V A+ELD R++ L
Sbjct: 21 GQNFLIMRDVIIKAVETSEIKKSDVVLEVGPGFGFLTDELSKRAGKVYAIELDKRIIEIL 80
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+ + + N +++IQGD +K + P F+ V+NIPYQISSP TFKLL H F A++M
Sbjct: 81 ENEYN---WEN-VEIIQGDAVKIEWPEFNKVVSNIPYQISSPFTFKLLKHD--FEKAVVM 134
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI--EPR 212
+Q EFA R+VA+PGD+ Y RLS+ A ++K+G+ F P PKVDS++V I +P+
Sbjct: 135 YQLEFAKRMVAKPGDRNYSRLSLMVNALANAKIVMKIGRGAFYPKPKVDSALVLIVPKPK 194
Query: 213 KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQS 263
R ++N + ++ F + K +S LK ML N + L+ L++
Sbjct: 195 DERIELN----ENLVKALFQHRRKLVSK--ALKESCHMLGINKKELKTLKN 239
>gi|386001511|ref|YP_005919810.1| putative ribosomal RNA small subunit methyltransferase A
[Methanosaeta harundinacea 6Ac]
gi|357209567|gb|AET64187.1| putative ribosomal RNA small subunit methyltransferase A
[Methanosaeta harundinacea 6Ac]
Length = 244
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 117/195 (60%), Gaps = 11/195 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQH L + ++ I A + +D +LE+GPGTGNLT+ L E V A+E+D +
Sbjct: 2 KKLGQHFLIDRRVLSRIGDYASLGRSDAVLEVGPGTGNLTRVLSERAGSVYAIEVDPALA 61
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+ RF++ + +I+GD L+ LP ++ V+N+PYQISS +TF+LL F A
Sbjct: 62 SSLEGRFEN------VSIIRGDALRVPLPEYNKIVSNLPYQISSKITFRLLARP--FDLA 113
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++M+Q+EFA R+VA PG + RLS+N A L V + F P P+V+S++VR+ P
Sbjct: 114 VLMYQREFAERMVAPPGTRERGRLSLNVAFWAEAEVLETVPRGAFSPRPQVESAIVRLRP 173
Query: 212 RKPRPQVNPVEWDGF 226
RK PV+W GF
Sbjct: 174 RK---TPAPVDWAGF 185
>gi|432328221|ref|YP_007246365.1| dimethyladenosine transferase [Aciduliprofundum sp. MAR08-339]
gi|432134930|gb|AGB04199.1| dimethyladenosine transferase [Aciduliprofundum sp. MAR08-339]
Length = 238
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 124/208 (59%), Gaps = 4/208 (1%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
Q+ L N + + IV+ A + D++LEIGPG G LT++LL+ + V+AVE+D + L
Sbjct: 5 SQNFLINGRIADFIVEHANLTPQDIVLEIGPGRGILTERLLKKSR-VVAVEIDPELYDAL 63
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
F S +L++I GD LK + P F +ANIPY ISSPL FK+L ++ F IIM
Sbjct: 64 NLIFSDEIKSGKLQIILGDALKVNFPAFTKVIANIPYHISSPLIFKILEYE--FEEGIIM 121
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
QKEFA RLVA+ G K Y RLSV H L V + NFRP PKVDS+VVRI+ ++
Sbjct: 122 VQKEFAERLVARKGSKKYGRLSVMMYYHGSAEILKVVKRGNFRPVPKVDSAVVRIK-KEN 180
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIF 242
R +P D ++ F ++ K + +I
Sbjct: 181 RFCADPQILDCVVKKIFSQRRKKIKNIL 208
>gi|147919487|ref|YP_686773.1| putative dimethyladenosine rRNA methyltransferase [Methanocella
arvoryzae MRE50]
gi|110622169|emb|CAJ37447.1| putative dimethyladenosine rRNA methyltransferase [Methanocella
arvoryzae MRE50]
Length = 260
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 111/181 (61%), Gaps = 6/181 (3%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K K QH L + ++ IV A + S +V+LEIG G GNLT+ L + + V +E+D R
Sbjct: 7 KRKDQHFLIDQAVLHRIVDAAALSSDEVVLEIGAGPGNLTRLLAQKARHVYTIEMDRRFA 66
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+ FQ + + VI G+ LK + P FD VAN+PY ISS +TFKLL + F+ A
Sbjct: 67 EALEADFQGS----NVTVIHGNALKVEFPRFDKVVANLPYSISSDVTFKLLSY--PFKFA 120
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
I+M+Q+EFA R+ A+ G++ Y RLSV Q A V L V + F P P+V+S+VV++ P
Sbjct: 121 ILMYQREFAQRMAAKVGEEDYSRLSVTVQHFADVKLLFNVSRRAFNPQPEVESTVVKLTP 180
Query: 212 R 212
R
Sbjct: 181 R 181
>gi|219851214|ref|YP_002465646.1| dimethyladenosine transferase [Methanosphaerula palustris E1-9c]
gi|219545473|gb|ACL15923.1| dimethyladenosine transferase [Methanosphaerula palustris E1-9c]
Length = 262
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 118/206 (57%), Gaps = 4/206 (1%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLE 93
+ QH L + ++ I++ AG+ V LEIGPG G LT+ LL+AG V A+E+D ++
Sbjct: 5 RDQHFLVDQRAIDRIIECAGVDGKSV-LEIGPGEGVLTRALLDAGATVSAIEVDRTLIAH 63
Query: 94 LQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAII 153
L RF S L +I+GD + P F++ VAN+PY ISSP+TF+LL F A++
Sbjct: 64 LTDRFVDEIRSGFLTLIEGDAARCPFPPFEVMVANLPYSISSPITFRLL--DTDFSSAVL 121
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
M+Q+EFA R+ A G RLSV Q +A V + +F PPP VDS VVRI P
Sbjct: 122 MYQREFAARMAAPVGTSGCGRLSVMVQTYALVEECFTLSPFSFNPPPAVDSMVVRIRPYG 181
Query: 214 P-RPQVNPVEWDGFLRICFIRKNKTL 238
P P + + +RI F ++ KT+
Sbjct: 182 PIFPITDRSVYAAVVRILFSQRRKTV 207
>gi|124486386|ref|YP_001031002.1| dimethyladenosine transferase [Methanocorpusculum labreanum Z]
gi|124363927|gb|ABN07735.1| dimethyladenosine transferase [Methanocorpusculum labreanum Z]
Length = 258
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 113/181 (62%), Gaps = 3/181 (1%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLE 93
K QH L + V+ I I+ V LE+GPG G LT LLE G V AVELD ++
Sbjct: 5 KDQHFLIDTDAVDFIADSIPIQGRTV-LEVGPGGGVLTAALLERGANVRAVELDGTLLPN 63
Query: 94 LQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAII 153
L++RF+ + +L + +GD + LP +D+ +AN+PY ISS +TF+LL + F A++
Sbjct: 64 LEQRFEEELSTGQLTITRGDASRVPLPAYDLVIANLPYSISSKITFRLL--ETGFETAVL 121
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
M+Q EFA R+V+ PGD Y RLSV Q +A V +LK+ F PPP+VDS+VV+I P +
Sbjct: 122 MYQWEFAKRMVSPPGDGEYGRLSVMVQTYADVELILKLPPQAFNPPPEVDSAVVKIIPHE 181
Query: 214 P 214
P
Sbjct: 182 P 182
>gi|435847899|ref|YP_007310149.1| dimethyladenosine transferase [Natronococcus occultus SP4]
gi|433674167|gb|AGB38359.1| dimethyladenosine transferase [Natronococcus occultus SP4]
Length = 296
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 128/243 (52%), Gaps = 27/243 (11%)
Query: 23 LGAGGISFHKSKGQHILKN-------PLLVESIVQKAGIKS------------TDVILEI 63
+ G+ QH L + P +ES Q+A + T +LEI
Sbjct: 8 IARAGVRGDPDHDQHFLVDDRVLDRLPTYLESEAQRASRDASGSDPLDEIDAETSHVLEI 67
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD 123
G GTG LT +LL V VE D + L+ F+ + RL VI+GD L+ +LP F
Sbjct: 68 GGGTGALTDRLLAVADEVTVVERDRVLAAFLREEFREEIDAGRLTVIEGDALEVELPDFS 127
Query: 124 ICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
V+N+PY +SS +TF+LL P R ++MFQ+EFA R+VA+PG Y RLSV+TQ +A
Sbjct: 128 ASVSNLPYGVSSEITFRLL---PEKRPLVLMFQQEFAERMVAEPGTSEYGRLSVSTQHYA 184
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSS 240
+ + K F PPP V S+VVR+EPR P V+ + D FLR F ++ KT+ +
Sbjct: 185 EPELVETIPKEAFSPPPAVQSAVVRLEPRDPDYAVD--DEDFFLRFVKAMFTQRRKTIRN 242
Query: 241 IFR 243
R
Sbjct: 243 AIR 245
>gi|333988491|ref|YP_004521098.1| ribosomal RNA small subunit methyltransferase A [Methanobacterium
sp. SWAN-1]
gi|333826635|gb|AEG19297.1| Ribosomal RNA small subunit methyltransferase A [Methanobacterium
sp. SWAN-1]
Length = 280
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 116/190 (61%), Gaps = 3/190 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L I K KGQ+ L N ++ I+ A + S D +LEIG G G LT L + + V
Sbjct: 9 LKKQDIRLDKRKGQNYLVNKTVLSKIITNAELSSEDTVLEIGAGIGTLTIPLAKRVRHVF 68
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
AVE DS++ L R + SN + VI GD K + P F+ V+N+PY+ISSP+TFKLL
Sbjct: 69 AVEQDSKVAEVLIERLEDLGVSN-VNVIVGDATKMEFPEFNKVVSNLPYKISSPITFKLL 127
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F AI+M+Q+EFA R+VA+ G+K Y RLSV ++V L +V K++F P PKV
Sbjct: 128 --KNKFDFAILMYQREFADRMVAKAGEKNYSRLSVMMHFCSKVEFLFEVSKDSFFPKPKV 185
Query: 203 DSSVVRIEPR 212
S+V+++ P+
Sbjct: 186 SSAVIKLTPK 195
>gi|256810093|ref|YP_003127462.1| dimethyladenosine transferase [Methanocaldococcus fervens AG86]
gi|256793293|gb|ACV23962.1| dimethyladenosine transferase [Methanocaldococcus fervens AG86]
Length = 268
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 123/217 (56%), Gaps = 22/217 (10%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ L + V V+ A + DV+LEIG G G LT++L + K V +E+D +
Sbjct: 6 KKLGQCFLIDKNFVNKAVEAANLTKDDVVLEIGLGKGILTEELAKNAKKVYIIEIDKNL- 64
Query: 92 LELQRRFQSTPYSNRLK-------VIQGDVLKTDLPYFDI--CVANIPYQISSPLTFKLL 142
PY+NRLK +I GD +K DL D VAN+PYQISSP+TFKLL
Sbjct: 65 ---------EPYANRLKEKYNNIEIIWGDAVKVDLSNLDFNKVVANLPYQISSPITFKLL 115
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA R+VA+ G K Y RLSV Q A V + KV N F P PKV
Sbjct: 116 --KKGFDLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIIAKVPPNAFSPKPKV 173
Query: 203 DSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
S++V+I+P K + + N +D FLR F +NK++
Sbjct: 174 FSAIVKIKPNKNKYHIENEDFFDNFLRAIFQHRNKSV 210
>gi|268323689|emb|CBH37277.1| Probable dimethyladenosine transferase [uncultured archaeon]
Length = 250
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 130/228 (57%), Gaps = 4/228 (1%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI +S GQ+ L + + +V+ A + S D++LEIG G G++T++L K V AVE
Sbjct: 11 GIRAVRSLGQYFLVDNDVAARMVEYASVGSEDLVLEIGAGLGSVTEELARKAKRVYAVEK 70
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D + L R Q +++VI+ D++K +LP FD VA+IPY +SSP+T+KLL H
Sbjct: 71 DKELCEIL--REQYVDKKGKIEVIEADIMKLELPEFDKVVASIPYSLSSPITYKLLLHN- 127
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F A++++QKEFA ++ A+P LY RLSV Q A + L V ++ F P P V +++
Sbjct: 128 -FELAVLLYQKEFAQKMTAEPRSHLYGRLSVIAQALADIEILEIVHRDAFCPSPPVKTAI 186
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN 254
VR +K R + E+ F+ F + K + IFR + L L K
Sbjct: 187 VRFTEKKKRLVEDKREFIEFVSFAFGHRRKMMRHIFRTSDALKDLAKR 234
>gi|284165664|ref|YP_003403943.1| dimethyladenosine transferase [Haloterrigena turkmenica DSM 5511]
gi|284015319|gb|ADB61270.1| dimethyladenosine transferase [Haloterrigena turkmenica DSM 5511]
Length = 284
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 138/248 (55%), Gaps = 15/248 (6%)
Query: 22 GLGA-GGISFHKSKGQHILKNPLLVESI---VQKAGIKSTDVILEIGPGTGNLTKKLLEA 77
GL A G+ + QH L + +++ + +Q+ TD +LEIG GTG LT +LL
Sbjct: 6 GLTARAGVRGDPDRDQHFLVDDRVLDRLPTYLQEID-ADTDHVLEIGGGTGALTDRLLAM 64
Query: 78 GK--MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISS 135
G V VE D + L+ F + L VI+GD L+ DLP F ++N+PY +SS
Sbjct: 65 GDEGKVTVVERDRELAEFLREEFADEIAAGNLTVIEGDALEVDLPEFTASLSNLPYGVSS 124
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
+TF+LL P R ++MFQ+EFA R+VA+PG Y RLSV+TQ +A + + K
Sbjct: 125 EITFRLL---PEGRPLVLMFQREFAERMVAEPGTSEYGRLSVSTQHYAAPEIVETIPKEA 181
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFRLKNVLSMLE 252
F PPP V+S+VVR+EPR P +V E+ FLR F ++ KT+ + R ++ LE
Sbjct: 182 FSPPPAVESAVVRLEPRDPDYEVGDEEF--FLRFVKALFTQRRKTIRNAIRNTAHITGLE 239
Query: 253 KNYRTLQA 260
++A
Sbjct: 240 APEAVVEA 247
>gi|218249123|ref|YP_002374494.1| dimethyladenosine transferase [Cyanothece sp. PCC 8801]
gi|226729777|sp|B7JWJ7.1|RSMA_CYAP8 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|218169601|gb|ACK68338.1| dimethyladenosine transferase [Cyanothece sp. PCC 8801]
Length = 272
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 139/243 (57%), Gaps = 24/243 (9%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K QH L++ ++ I++ A + +D++LEIGPGTG LT++LL + ++AVELD +
Sbjct: 6 KRFAQHWLRSETALDQIIEAAQLNMSDLVLEIGPGTGILTRRLLPLVQSIVAVELDRDLC 65
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFKL 141
L + F + N +++GD+L DL P F + VANIPY I+SP+ KL
Sbjct: 66 YRLAKSFGNF---NHFLLLEGDILSLDLTTQLEQFPQFQPINKVVANIPYNITSPILEKL 122
Query: 142 L-----FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
L P++ +++ QKE A R+VA P K Y LSV TQ A+ ++ +V F
Sbjct: 123 LGSIAHPQHPSYELIVLLMQKEVAQRIVASPQSKAYGALSVRTQYLAQCDYICEVPSKAF 182
Query: 197 RPPPKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNY 255
PPPKVDS+V+R+ PR P +NP + D +++ F + K L + N+ S+++K++
Sbjct: 183 DPPPKVDSAVIRLTPRSLETPAINPQKLDQLVKLGFANRRKMLHN-----NLKSIIDKDH 237
Query: 256 RTL 258
TL
Sbjct: 238 LTL 240
>gi|361067795|gb|AEW08209.1| Pinus taeda anonymous locus 2_3113_01 genomic sequence
Length = 136
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 98/146 (67%), Gaps = 14/146 (9%)
Query: 191 VGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
VGKNNFRPPPKVDSSVVRIEPR P P ++ EWDG +R+CF RKNKTL SIFR K +LS+
Sbjct: 1 VGKNNFRPPPKVDSSVVRIEPRNPLPPISFKEWDGMIRLCFNRKNKTLGSIFRQKAILSL 60
Query: 251 LEKNYRTLQALQS----SQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDD 306
LEKNY+T QALQ S SS G+ I LGDS+ D SM +D G E D D
Sbjct: 61 LEKNYKTFQALQEACQKSNESSFGDMSI------LGDSSNDVSMDIDAG---EDQDMDVD 111
Query: 307 GDSDVEGEVSEFKDKVLAVLREGQFE 332
EG S+FK+KVL +L+EG FE
Sbjct: 112 DADMQEG-ASQFKEKVLNILKEGGFE 136
>gi|409095945|ref|ZP_11215969.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus zilligii AN1]
Length = 283
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 118/183 (64%), Gaps = 7/183 (3%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQ+ L P ++E V +A + +D +LEIGPG G LT +L V A+E D R+V L
Sbjct: 21 GQNFLIVPDIIERNVARAELSGSDTVLEIGPGLGVLTDELSRRAGKVFAIEKDPRIVEIL 80
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+R + N +++I+GD ++ + P F+ V+N+PYQISSP+TFKLL ++ F A+++
Sbjct: 81 RREYSW----NNVEIIEGDAMEVEWPEFNKMVSNLPYQISSPVTFKLLNYE--FERAVLI 134
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
+Q EFA R+VA+PG + Y RLS+ AR + ++G+ F P P+VDS+VV +EP KP
Sbjct: 135 YQLEFAERMVARPGTRNYSRLSLMVSAKARAELVERIGRGAFWPKPEVDSAVVVLEP-KP 193
Query: 215 RPQ 217
R +
Sbjct: 194 RSE 196
>gi|448368904|ref|ZP_21555671.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba aegyptia DSM 13077]
gi|445651447|gb|ELZ04355.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba aegyptia DSM 13077]
Length = 318
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 121/210 (57%), Gaps = 11/210 (5%)
Query: 57 TDVILEIGPGTGNLTKKLLEAGK---MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGD 113
T +LEIG GTG LT +LLE G V VE DS + L+ F + RL VI+GD
Sbjct: 78 TSHLLEIGGGTGALTDRLLELGTETDRVTVVERDSELASFLRTEFSDEIDAGRLTVIEGD 137
Query: 114 VLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYC 173
L+ DLP F V+N+PY +SS +TF+LL P R ++MFQ+EFA R+VA+PG Y
Sbjct: 138 ALEVDLPEFTASVSNLPYGVSSEITFRLL---PEGRPLVLMFQQEFAERMVAEPGTSEYG 194
Query: 174 RLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC--- 230
RLSV+TQ +A + + K F PPP V S+VVR+ PR+P +V + D FLR
Sbjct: 195 RLSVSTQHYADAELVESIPKEAFSPPPAVQSAVVRLCPREPDYEV--ADEDFFLRFVKAL 252
Query: 231 FIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
F ++ KT+ + R +S L+ + A
Sbjct: 253 FTQRRKTIRNAIRNTAHISGLDAPEAVVDA 282
>gi|428220891|ref|YP_007105061.1| dimethyladenosine transferase [Synechococcus sp. PCC 7502]
gi|427994231|gb|AFY72926.1| dimethyladenosine transferase [Synechococcus sp. PCC 7502]
Length = 261
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 131/239 (54%), Gaps = 12/239 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH LK+ + I+Q A ++ TD ILEIGPGTG LT KLL + ++AVE+D
Sbjct: 2 IHPRKQFGQHWLKSDKALAKILQAANLQLTDRILEIGPGTGILTVKLLPLVRSLVAVEID 61
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL--FHQ 145
+ L+ RF +L++I+GD+L LP + VANIPY I+SP+ KLL Q
Sbjct: 62 RDLCQNLRHRFAEPILEQKLELIEGDILSLPLPDCNKVVANIPYNITSPILEKLLGSISQ 121
Query: 146 PA--FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
P F +++ QKE RLVA+ G K Y +SV Q A + V F PPPKVD
Sbjct: 122 PVAQFEQIVLLVQKEIGDRLVAKAGHKAYGAMSVRVQYLAECHFICDVPAKAFTPPPKVD 181
Query: 204 SSVVRIEPRKP-RPQVNPVEWDGFLRICFIRKNKTLSSIF-------RLKNVLSMLEKN 254
S+VV + PR P +P +P + +++ F K K L + RL N+L ++ N
Sbjct: 182 SAVVCLLPRSPVKPASDPKFLETIIKLGFATKRKMLRNNLGAIIDRDRLVNILEAIQIN 240
>gi|448348688|ref|ZP_21537536.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba taiwanensis DSM 12281]
gi|445642349|gb|ELY95417.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba taiwanensis DSM 12281]
Length = 314
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 119/202 (58%), Gaps = 11/202 (5%)
Query: 57 TDVILEIGPGTGNLTKKLLEAGK---MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGD 113
T +LEIG GTG LT +LLE G V VE DS + L+ F + RL VI+GD
Sbjct: 74 TSHLLEIGGGTGALTDRLLELGTETDQVTVVERDSELASFLRTEFSDEIDAGRLTVIEGD 133
Query: 114 VLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYC 173
L+ DLP F V+N+PY +SS +TF+LL P R ++MFQ+EFA R+VA+PG Y
Sbjct: 134 ALEVDLPEFTASVSNLPYGVSSEITFRLL---PEGRPLVLMFQQEFAERMVAEPGTSEYG 190
Query: 174 RLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC--- 230
RLSV+TQ +A + + K F PPP V S+VVR+ PR+P +V + D FLR
Sbjct: 191 RLSVSTQHYADAELVESIPKEAFSPPPAVQSAVVRLCPREPDYEV--ADEDFFLRFVKAL 248
Query: 231 FIRKNKTLSSIFRLKNVLSMLE 252
F ++ KT+ + R +S L+
Sbjct: 249 FTQRRKTIRNAIRNTAHISGLD 270
>gi|257062209|ref|YP_003140097.1| dimethyladenosine transferase [Cyanothece sp. PCC 8802]
gi|256592375|gb|ACV03262.1| dimethyladenosine transferase [Cyanothece sp. PCC 8802]
Length = 272
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 139/243 (57%), Gaps = 24/243 (9%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K QH L++ ++ I++ A + +D++LEIGPGTG LT++LL + ++AVELD +
Sbjct: 6 KRFAQHWLRSETALDQIIEAAQLNMSDLVLEIGPGTGILTRRLLPLVQSIVAVELDRDLC 65
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFKL 141
L + F + N +++GD+L DL P F + VANIPY I+SP+ KL
Sbjct: 66 YRLAKSFGNF---NHFLLLEGDILSLDLTTQLEQFPQFQPINKVVANIPYNITSPILEKL 122
Query: 142 L-----FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
L P++ +++ QKE A R+VA P K Y LSV TQ A+ ++ +V F
Sbjct: 123 LGSIAHPQHPSYELIVLLMQKEVAQRIVASPQSKAYGALSVRTQYLAQCDYICEVPSKAF 182
Query: 197 RPPPKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNY 255
PPPKVDS+V+R+ PR P +NP + D +++ F + K L + N+ S++++++
Sbjct: 183 DPPPKVDSAVIRLTPRSLETPAINPQKLDQLVKLGFANRRKMLHN-----NLKSIIDRDH 237
Query: 256 RTL 258
TL
Sbjct: 238 LTL 240
>gi|345005063|ref|YP_004807916.1| ribosomal RNA small subunit methyltransferase A [halophilic
archaeon DL31]
gi|344320689|gb|AEN05543.1| Ribosomal RNA small subunit methyltransferase A [halophilic
archaeon DL31]
Length = 289
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 124/224 (55%), Gaps = 12/224 (5%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIG GTG LT +LL AG V VE DS + L++ F + RL VI+GD L DL
Sbjct: 51 LLEIGGGTGALTDRLLAAGDHVTVVERDSDLAAFLRKEFAEDIDAGRLDVIEGDALDVDL 110
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P F V+N+PY +SS + F+LL P + ++MFQKEFA R+VA PG+ Y RLSV+
Sbjct: 111 PEFTASVSNLPYGVSSEIAFQLL---PEKKPLVLMFQKEFAERMVAAPGEDDYGRLSVSA 167
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNK 236
Q +A V + V K F P P V+S+VVR PR P +V V+ FLR F ++ K
Sbjct: 168 QHYADVELVEHVPKEAFDPQPSVESAVVRCTPRDPDYEV--VDEAFFLRFVKALFTQRRK 225
Query: 237 TLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPS 280
T+ + R +S L+ A+ S L + G TP+
Sbjct: 226 TMRNAIRNTGHISGLDDP----DAVVDSAEEPLMSKRAGNVTPA 265
>gi|341581719|ref|YP_004762211.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus sp. 4557]
gi|340809377|gb|AEK72534.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermococcus sp. 4557]
Length = 273
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 138/227 (60%), Gaps = 7/227 (3%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQ+ L P ++E V++A + D +LE+GPG G LT L V A+E DSR+V E+
Sbjct: 21 GQNFLIVPDIIERNVERAELNGNDTVLEVGPGLGVLTDALSRHAGKVYAIEKDSRLV-EI 79
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
R P +++I+GD LK + P F+ V+N+PYQISSP+TF+ L + F A+++
Sbjct: 80 LRAEYDWP---NVEIIEGDALKVEFPAFNKIVSNLPYQISSPITFRFLRYD--FERAVLI 134
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
+Q EFA R+VA+PGDK Y RLS+ + A + ++G+ F P PKVDS+V+ +EP KP
Sbjct: 135 YQLEFAQRMVAEPGDKNYSRLSLMVRAKAYAELVERIGRGAFWPRPKVDSAVIVLEP-KP 193
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL 261
R + + D + R++ L+++ + ++L + ++ ++ ++ +
Sbjct: 194 RDKRLELNEDLVRALFQHRRSTVLAALKKSHHMLGLSKEEFKRVRGI 240
>gi|110668775|ref|YP_658586.1| dimethyladenosine transferase [Haloquadratum walsbyi DSM 16790]
gi|385804282|ref|YP_005840682.1| dimethyladenosine transferase [Haloquadratum walsbyi C23]
gi|118600870|sp|Q18GB5.1|RSMA_HALWD RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|109626522|emb|CAJ52985.1| probable dimethyladenosine transferase [Haloquadratum walsbyi DSM
16790]
gi|339729774|emb|CCC41055.1| probable dimethyladenosine transferase [Haloquadratum walsbyi C23]
Length = 296
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 138/258 (53%), Gaps = 11/258 (4%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIA 83
G+S + QH L + +++ I + STD ILEIG GTG LT +LL G V
Sbjct: 33 AGVSGDPNFDQHFLIDDRVLDRIPTYL-LDSTDTTHILEIGAGTGALTDRLLAVGDTVTV 91
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
+E D+ + L+ F RL +I+GD L+ LP F C++N+PY ISS + F+LL
Sbjct: 92 IERDATLAAFLREEFAVMIDDGRLNIIEGDALEVTLPAFTTCISNLPYGISSEILFELL- 150
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
PA I+M Q+EF R+ A PG Y RLSV+ Q +A V + V F P P VD
Sbjct: 151 --PADCPLIVMVQREFGERMAADPGTDAYGRLSVSAQHYATVEVVETVPPTAFAPEPAVD 208
Query: 204 SSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQ 262
S+++R EPR P V + + F++ F ++ KT+ + R +SML+ T A+
Sbjct: 209 SALIRAEPRDPDYTVTDETFFLRFVKAVFTQRRKTVRNAIRNTAHISMLD----TPDAVV 264
Query: 263 SSQNSSLGNTEIGTDTPS 280
++ + +L + G TPS
Sbjct: 265 NAADEALLSQRAGDLTPS 282
>gi|448705920|ref|ZP_21700881.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein,
partial [Halobiforma nitratireducens JCM 10879]
gi|445795160|gb|EMA45694.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein,
partial [Halobiforma nitratireducens JCM 10879]
Length = 285
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 134/243 (55%), Gaps = 25/243 (10%)
Query: 23 LGAGGISFHKSKGQHILKN-------PLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLL 75
+G G+ + QH L + P +E I T +LEIG GTG LT +LL
Sbjct: 11 IGRAGVRGDPDRDQHFLVDDRVLDRLPTYLEEI-----DADTTHLLEIGGGTGALTDRLL 65
Query: 76 ----EAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPY 131
E+G++ + VE D + L+ F ++RL VI+GD L+ DLP F V+N+PY
Sbjct: 66 ALAGESGEVTV-VERDPDLAAFLREEFTDAIDADRLTVIEGDALEVDLPDFTASVSNLPY 124
Query: 132 QISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
+SS +TF+LL P + ++MFQ+EFA R+VA+PG Y RLSV+TQ +A + V
Sbjct: 125 GVSSEITFRLL---PEGKRLVLMFQQEFAERMVAEPGTSEYGRLSVSTQHYADAELVETV 181
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFRLKNVL 248
K F PPP V+S+VVR+ PR P V+ E+ FLR F ++ KT+ + R +
Sbjct: 182 PKEAFSPPPAVESAVVRLRPRDPEYDVDDEEF--FLRFVKALFTQRRKTIRNGIRNTAHI 239
Query: 249 SML 251
S L
Sbjct: 240 SRL 242
>gi|288559416|ref|YP_003422902.1| dimethyladenosine transferase KsgA [Methanobrevibacter ruminantium
M1]
gi|288542126|gb|ADC46010.1| dimethyladenosine transferase KsgA [Methanobrevibacter ruminantium
M1]
Length = 298
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 114/190 (60%), Gaps = 3/190 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L I +K+ GQ+ L + + I+ A + D +LEIGPG G LT +L + K VI
Sbjct: 15 LQENDIKLNKNLGQNYLIDDFKRKKIINYANLTKEDTVLEIGPGIGTLTIELAKRAKKVI 74
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
A+E D + L++R + +N +++I GD +K D P F+ V+N+PYQISSP++FK L
Sbjct: 75 AIEQDETIFNILKKRLEKEKINN-VELINGDAVKVDFPEFNKIVSNLPYQISSPISFKFL 133
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H F AI+M+QKEFA R+ + G K Y RLS A V L KV +F P PKV
Sbjct: 134 NHD--FDLAILMYQKEFADRMNGKVGTKQYSRLSAMLYFKADVKFLTKVSPESFIPSPKV 191
Query: 203 DSSVVRIEPR 212
DS+V++++P+
Sbjct: 192 DSAVIQLKPK 201
>gi|295692081|ref|YP_003600691.1| dimethyladenosine transferase [Lactobacillus crispatus ST1]
gi|295030187|emb|CBL49666.1| Dimethyladenosine transferase [Lactobacillus crispatus ST1]
Length = 294
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 137/232 (59%), Gaps = 17/232 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ AGIK D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDQTAILGIVEAAGIKKDDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P ++R K++ DVLK + +FD VAN+PY I++P+
Sbjct: 86 TILQNELPKKIDDQPLASRFKILLKDVLKANFKEDIGDFFDFTKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL AQPG K Y L+++ Q +V L+VG+N+F
Sbjct: 146 IFALAESDLHFTSLTLMMQKEVAERLEAQPGSKDYGPLTISVQTEMKVKLALQVGRNSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFRLKNVL 248
P PKVDSSVV + P K +P + + + +++CF ++ KTL++ LK++L
Sbjct: 206 PRPKVDSSVVVLTPLKEKPAIEDRKHFIWVVKMCFSQRRKTLNN--NLKSLL 255
>gi|160903048|ref|YP_001568629.1| dimethyladenosine transferase [Petrotoga mobilis SJ95]
gi|160360692|gb|ABX32306.1| dimethyladenosine transferase [Petrotoga mobilis SJ95]
Length = 275
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 137/252 (54%), Gaps = 12/252 (4%)
Query: 20 GQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGK 79
+ L I K GQ+ L N + IV+K+ I DVI+EIG G G LT+++ + K
Sbjct: 4 SEWLKKYDIRLKKGLGQNFLSNSTVSHEIVKKSEIDENDVIIEIGTGNGILTEEIAKKAK 63
Query: 80 MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF-DI----CVANIPYQIS 134
VI E+D R+ L+ RF+ S +++ D L TDL F DI +ANIPY IS
Sbjct: 64 KVITFEIDERLKPLLEERFEG---SKNVEIHFEDFLNTDLSKFKDIPKLKYIANIPYYIS 120
Query: 135 SPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKN 194
S + K+ P F AI MFQKEF RL+A+ K Y LS+ Q + V ++ V KN
Sbjct: 121 SKILEKIFEESPKFEYAIFMFQKEFGQRLMAK-SKKSYSPLSIFVQTYCTVERIMDVSKN 179
Query: 195 NFRPPPKVDSSVVRIEP-RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEK 253
NF P PKVDS +++ P K +++P ++ F+ ICF ++ KT+ + LK ++ EK
Sbjct: 180 NFIPIPKVDSVILKFNPVYKYVEEIDPKDFMKFVHICFSKRRKTIKN--NLKEIIPDTEK 237
Query: 254 NYRTLQALQSSQ 265
+Q SS+
Sbjct: 238 YLTEVQIDPSSR 249
>gi|104779701|ref|YP_606199.1| dimethyladenosine transferase [Pseudomonas entomophila L48]
gi|95108688|emb|CAK13382.1| S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase,
kasugamycin resistance [Pseudomonas entomophila L48]
Length = 266
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K+ + +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F ++ QGD LK D + V N+PY IS+PL F LL H
Sbjct: 71 PILQHKFAG---RGNFRLHQGDALKFDFNQLGVPERSLKVVGNLPYNISTPLIFHLLAHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 NLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P +P+ + +R F ++ KTL + +
Sbjct: 188 IVRLVPHEVLPHPAKDPLLLERVVREAFNQRRKTLRNTLK 227
>gi|448317444|ref|ZP_21507000.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronococcus jeotgali DSM 18795]
gi|445603964|gb|ELY57917.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronococcus jeotgali DSM 18795]
Length = 279
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 127/225 (56%), Gaps = 8/225 (3%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESI---VQKAGIKSTDVILEIGPGTGNLTKKLLEAGK 79
+ G+ + QH L + +++ + + + G ++ V LEIG GTG LT +LL
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLTELGADTSHV-LEIGGGTGALTDRLLAIAD 66
Query: 80 MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTF 139
V VE D + L+ F+ RL VI+GD L+ DLP F V+N+PY +SS +TF
Sbjct: 67 EVTVVERDRELAAFLREEFREEIDDERLTVIEGDALEVDLPDFSASVSNLPYGVSSEITF 126
Query: 140 KLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
+LL P R ++MFQ+EFA R+VA+PG Y RLSV+TQ +A + + K F PP
Sbjct: 127 RLL---PEKRPLVLMFQQEFAERMVAEPGTGEYGRLSVSTQHYAAPELVESIPKEAFSPP 183
Query: 200 PKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFR 243
P V S+VVR+EPR P V + + F++ F ++ KT+ + R
Sbjct: 184 PAVRSAVVRLEPRDPDYAVGDEAFFLRFVKAMFTQRRKTIRNAIR 228
>gi|227877971|ref|ZP_03995975.1| dimethyladenosine transferase [Lactobacillus crispatus JV-V01]
gi|256844351|ref|ZP_05549837.1| dimethyladenosine transferase [Lactobacillus crispatus 125-2-CHN]
gi|256849246|ref|ZP_05554679.1| dimethyladenosine transferase [Lactobacillus crispatus MV-1A-US]
gi|312978360|ref|ZP_07790102.1| dimethyladenosine transferase [Lactobacillus crispatus CTV-05]
gi|227862441|gb|EEJ69956.1| dimethyladenosine transferase [Lactobacillus crispatus JV-V01]
gi|256613429|gb|EEU18632.1| dimethyladenosine transferase [Lactobacillus crispatus 125-2-CHN]
gi|256714022|gb|EEU29010.1| dimethyladenosine transferase [Lactobacillus crispatus MV-1A-US]
gi|310894703|gb|EFQ43775.1| dimethyladenosine transferase [Lactobacillus crispatus CTV-05]
Length = 294
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 129/224 (57%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ AGIK D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDQTAILGIVEAAGIKKDDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P ++R K+I DVLK D +FD VAN+PY I++P+
Sbjct: 86 TILQNELPKKIDDQPLASRFKLILKDVLKADFKVDISDFFDFTKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL AQPG K Y L+++ Q V L+V N+F
Sbjct: 146 IFALAESDLHFTSLTLMMQKEVAERLEAQPGSKEYGPLTISVQTEMNVKLALQVSHNSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P PKVDSSVV + P K +P + N + +++CF ++ KTL++
Sbjct: 206 PRPKVDSSVVVLTPLKEKPAIENRKHFIWVVKMCFSQRRKTLNN 249
>gi|443469972|ref|ZP_21060110.1| Dimethyladenosine transferase [Pseudomonas pseudoalcaligenes KF707]
gi|442899491|gb|ELS25939.1| Dimethyladenosine transferase [Pseudomonas pseudoalcaligenes KF707]
Length = 268
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGIIHRILRSIHAREGERLLEIGPGQGALTEGLLASGAQLDVIELDLDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L RF P ++ QGD LK D D V N+PY IS+PL F LL H
Sbjct: 71 PILTHRFGQLP---NFRLNQGDALKFDFRRLDAAPHSLRVVGNLPYNISTPLIFHLLAHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A+PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 DLIRDMHFMLQKEVVERLAAEPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P +P + +R F ++ KTL + +
Sbjct: 188 IVRLVPHEVLPHPAKDPALLERVVREAFNQRRKTLRNTLK 227
>gi|116754303|ref|YP_843421.1| dimethyladenosine transferase [Methanosaeta thermophila PT]
gi|116665754|gb|ABK14781.1| dimethyladenosine transferase [Methanosaeta thermophila PT]
Length = 249
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 123/215 (57%), Gaps = 14/215 (6%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQH L + + E I A I +D ILEIGPG G+LT+ L V A+E D + +
Sbjct: 4 GQHFLTDRGIAERIAGYAEISPSDRILEIGPGKGSLTEFLAARAGRVYAIEADPELARYV 63
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+ F + ++VIQGD L+ DLP ++ V+N+PY IS+ +T +LL + F ++M
Sbjct: 64 EESFPN------VEVIQGDALRVDLPEYNKVVSNLPYHISTKITLRLL--RNPFDLMVLM 115
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
+Q+EF R++A PG + Y RLSVN +A V L V ++ FRP P V SSVVR+ PR+
Sbjct: 116 YQREFVERMLASPGSREYGRLSVNVSYYADVEVLETVPRSAFRPMPHVSSSVVRLRPRRD 175
Query: 215 RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
R V+ + + R F ++ K ++KN L+
Sbjct: 176 RELVDELIFSSISRDLFTKRRK------KVKNALA 204
>gi|150400809|ref|YP_001324575.1| dimethyladenosine transferase [Methanococcus aeolicus Nankai-3]
gi|166221674|sp|A6UTZ1.1|RSMA_META3 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|150013512|gb|ABR55963.1| dimethyladenosine transferase [Methanococcus aeolicus Nankai-3]
Length = 271
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 123/212 (58%), Gaps = 11/212 (5%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
+K GQ LK+ +V+ + A I D++LEIG G G LTK+L + K VI +ELD ++
Sbjct: 4 NKKLGQCFLKDKNIVKKAINAANINKNDIVLEIGLGKGILTKELAKQCKKVIVIELDKKL 63
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDLPY--FDICVANIPYQISSPLTFKLLFHQPAF 148
+ + + P +++I D LK +L F+ VAN+PYQISSP+TFKLL F
Sbjct: 64 EIFWEDIIKEYP---NVEIIWNDALKVNLKELGFNKVVANLPYQISSPITFKLL--DCDF 118
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
A++M+Q EFA R+ A G K Y RLSV+ Q A V ++ KV + F P PKVDS++V+
Sbjct: 119 EVAVLMYQYEFAKRMGAPSGTKEYSRLSVSVQYRAVVDYVCKVSPSAFSPKPKVDSAIVK 178
Query: 209 IEPRKPRPQVNPVEW---DGFLRICFIRKNKT 237
I +K P N W DGF R F +NK
Sbjct: 179 I-TKKNEPIHNIDNWEFFDGFNRALFQHRNKN 209
>gi|282163396|ref|YP_003355781.1| probable dimethyladenosine transferase [Methanocella paludicola
SANAE]
gi|282155710|dbj|BAI60798.1| probable dimethyladenosine transferase [Methanocella paludicola
SANAE]
Length = 276
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 117/185 (63%), Gaps = 6/185 (3%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I+ K K QH L + +++ IV A I + +LEIG G GNLT+ L + + V +E+D
Sbjct: 11 IAPDKRKDQHFLIDLNILKKIVAIADIHKDEDVLEIGTGPGNLTELLAQKARHVYTIEMD 70
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPA 147
+V L+ +F+ + + +I+G+ LK + P FD VAN+PY ISS +TFKLL +
Sbjct: 71 PALVALLEEKFKGS----NVTIIKGNALKVEFPRFDKVVANLPYSISSDVTFKLLKNN-- 124
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
F+ I+M+Q+EFA R++A+ G+ Y RLSV+ Q A V L+KV F PPP+V+S+VV
Sbjct: 125 FKLGILMYQREFAQRMIARVGEPDYSRLSVDVQHFADVEILMKVPPQAFSPPPEVESAVV 184
Query: 208 RIEPR 212
R+ PR
Sbjct: 185 RVTPR 189
>gi|317969764|ref|ZP_07971154.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Synechococcus sp. CB0205]
Length = 278
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 138/247 (55%), Gaps = 19/247 (7%)
Query: 29 SFHKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAV 84
+ H+++ GQH LK+ +++ I+Q A + + D +LE+GPG G LT++LLE+ + V AV
Sbjct: 4 AAHRARKRFGQHWLKDQSVLDRILQAAELTAADTVLEVGPGRGALTERLLESSARAVCAV 63
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL-- 142
ELD +V LQ RF + P R + +GDVL +LP VANIPY I+ PL +L+
Sbjct: 64 ELDRDLVSGLQERFGANP---RFSLTEGDVLAVELPEATAVVANIPYNITGPLLERLVGR 120
Query: 143 FHQPA---FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
+PA +R +++ Q+E R+ A+PG Y LSV QL AR S + V F+PP
Sbjct: 121 LDRPALQPYRRLVLLVQQEVGERIRARPGSSAYSALSVRMQLLARCSTVCPVPPRCFQPP 180
Query: 200 PKVDSSVVRIEPRKPRPQVNPV---EWDGFLRICFIRKNK----TLSSIFRLKNVLSMLE 252
PKV S VV ++P +++P + LR CF + K TLS + + + S+ E
Sbjct: 181 PKVMSEVVALDPLPLEQRLDPALAKTVEMLLRRCFAARRKMLRNTLSGLVEAEQLQSLTE 240
Query: 253 KNYRTLQ 259
LQ
Sbjct: 241 AAEIGLQ 247
>gi|383320663|ref|YP_005381504.1| dimethyladenosine transferase [Methanocella conradii HZ254]
gi|379322033|gb|AFD00986.1| dimethyladenosine transferase [Methanocella conradii HZ254]
Length = 270
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 129/229 (56%), Gaps = 19/229 (8%)
Query: 25 AGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
+ I K K QH L + ++ IV A I + +LEIG G GNLT+ L + + V ++
Sbjct: 2 SASIKPDKRKDQHFLIDRDVLRKIVDFADIHGNEDVLEIGAGPGNLTELLAQRARHVYSI 61
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E+D + L+ RF+ + + +I G+ LK P FD VAN+PY ISS +TFKLL H
Sbjct: 62 EIDPALASLLEERFKDS----NVTIIMGNALKVAFPRFDKVVANLPYSISSEVTFKLLRH 117
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
FR I+M+Q+EFA R++A+ G+ Y RLSV Q A V L+KV F PPP+V+S
Sbjct: 118 D--FRLGILMYQREFARRMMAKVGESEYSRLSVGVQYFADVEVLMKVPPRAFIPPPEVES 175
Query: 205 SVVRIEPRKPRPQVNPVE----WDGFLRICFIRKNKTLSSIFRLKNVLS 249
+VV++ PRP V+ + G + F+ + K RL+N L+
Sbjct: 176 AVVKL---TPRPASYSVKDRGLFMGLVTAAFMGRRK------RLRNALA 215
>gi|448323600|ref|ZP_21513058.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronococcus amylolyticus DSM 10524]
gi|445599496|gb|ELY53529.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronococcus amylolyticus DSM 10524]
Length = 279
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 124/228 (54%), Gaps = 14/228 (6%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV----ILEIGPGTGNLTKKLLEAG 78
+ G+ + QH L + +++ + + DV +LEIG GTG LT +LL
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRL--PTYLTEIDVNTSHLLEIGGGTGALTDRLLAVA 65
Query: 79 KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLT 138
V VE D + L+ F RL V++GD L+ DLP F V+N+PY +SS +T
Sbjct: 66 DAVTVVERDRELAAFLREEFADEIDDGRLTVLEGDALEVDLPDFSASVSNLPYGVSSEIT 125
Query: 139 FKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
F+LL P R ++MFQ+EFA R+VA PG Y RLSV+TQ +A + + K F P
Sbjct: 126 FRLL---PEKRPLVLMFQQEFAERMVADPGTSEYGRLSVSTQHYAEPELVESIPKEAFSP 182
Query: 199 PPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFR 243
PP V S+VVR+EPR+P V+ + FLR F ++ KT+ + R
Sbjct: 183 PPAVRSAVVRLEPREPDYAVDDEAF--FLRFVKAMFTQRRKTIRNAIR 228
>gi|433638366|ref|YP_007284126.1| dimethyladenosine transferase [Halovivax ruber XH-70]
gi|433290170|gb|AGB15993.1| dimethyladenosine transferase [Halovivax ruber XH-70]
Length = 289
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIGPGTG LT +LL G V A+E D ++ L+R F + RL VI+GD L L
Sbjct: 60 LLEIGPGTGALTDRLLATGATVTAIERDRKLAGFLRREFDEAIEAGRLTVIEGDALDVAL 119
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P V+N+PY SS LTF+LL P ++MFQ+EFA R++A+PG Y RLSV+T
Sbjct: 120 PDVTASVSNLPYSASSDLTFRLL---PRGIELVLMFQREFAERMIAEPGTSDYGRLSVST 176
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
Q +A V + V F PPP V+S++VR EPR P +V + + F++ F ++ KT+
Sbjct: 177 QHYAAVEIVETVPPEAFSPPPAVESAIVRTEPRAPPYEVADETFFLRFVKALFTQRRKTV 236
Query: 239 SSIFRLKNVLSMLEKNYRTLQA 260
+ R +S L+ + A
Sbjct: 237 RNGIRNTAHISGLDDPAAVVDA 258
>gi|115252788|emb|CAK98224.1| putative dimethyladenosine transferase protein [Spiroplasma citri]
Length = 282
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 123/232 (53%), Gaps = 16/232 (6%)
Query: 19 QGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG 78
Q Q + A GI KSKGQ+ L N + IV A ILEIGPG G LT +L
Sbjct: 4 QNQEMRAEGIVVKKSKGQNFLTNTHFINLIVDSAFDLPNTNILEIGPGMGALTSSILLKA 63
Query: 79 KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI----------CVAN 128
++ VE+DS +V L +F+ L +IQ D+L DL + ++N
Sbjct: 64 NKLVCVEIDSTLVEYLTLKFKD----QNLTIIQADILTLDLEKLFLTEFLDNNPISIISN 119
Query: 129 IPYQISSPLTFKLL-FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
IPY I+SP+ FKLL P + I+M QKE R++AQP K Y LSV Q ++ +
Sbjct: 120 IPYYITSPIIFKLLKIKNPKVKEIILMMQKEVGERIMAQPNSKNYNSLSVVCQFYSDIEK 179
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQ-VNPVEWDGFLRICFIRKNKTL 238
+ VG+NNF P PKVDS V++ + K P +N E+ F+R+ F K KT+
Sbjct: 180 VSLVGRNNFVPAPKVDSIVLKFKLNKKYPALINDKEFIKFIRMMFATKRKTI 231
>gi|262047261|ref|ZP_06020219.1| dimethyladenosine transferase [Lactobacillus crispatus MV-3A-US]
gi|423319703|ref|ZP_17297578.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
crispatus FB049-03]
gi|423320287|ref|ZP_17298159.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
crispatus FB077-07]
gi|260572506|gb|EEX29068.1| dimethyladenosine transferase [Lactobacillus crispatus MV-3A-US]
gi|405587748|gb|EKB61475.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
crispatus FB049-03]
gi|405607800|gb|EKB80761.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
crispatus FB077-07]
Length = 294
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 129/224 (57%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ AGIK D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDQTAILGIVEAAGIKKDDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P ++R K+I D+LK D +FD VAN+PY I++P+
Sbjct: 86 TILQNELPKKIDDQPLASRFKLILKDLLKADFKVDISDFFDFTKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL AQPG K Y L+++ Q V L+V N+F
Sbjct: 146 IFALAESDLHFTSLTLMMQKEVAERLEAQPGSKEYGPLTISVQTEMNVKLALQVSHNSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P PKVDSSVV + P K +P + N + +++CF ++ KTL++
Sbjct: 206 PRPKVDSSVVVLTPLKEKPAIENRKHFIWVVKMCFSQRRKTLNN 249
>gi|448374047|ref|ZP_21557932.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halovivax asiaticus JCM 14624]
gi|445660724|gb|ELZ13519.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halovivax asiaticus JCM 14624]
Length = 289
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 116/202 (57%), Gaps = 4/202 (1%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIGPGTG LT +LL G V A+E D ++ L+R F + RL VI+ D L L
Sbjct: 60 LLEIGPGTGALTDRLLATGATVTAIERDRKLAGFLRREFDEAIDAGRLTVIEDDALDVAL 119
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P V+N+PY SS LTF+LL P ++MFQ+EFA R+VA+PG Y RLSV+T
Sbjct: 120 PDVTASVSNLPYSASSDLTFRLL---PRGIELVLMFQREFAERMVAEPGTSDYGRLSVST 176
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
Q +A V + V F PPP VDS++VR EPR P +V + + F++ F ++ KT+
Sbjct: 177 QHYAAVEIVETVPPEAFSPPPAVDSAIVRTEPRAPSYEVADETFFLRFVKALFTQRRKTV 236
Query: 239 SSIFRLKNVLSMLEKNYRTLQA 260
+ R +S L+ + A
Sbjct: 237 RNGIRNTAHISELDDPAAVVDA 258
>gi|37521560|ref|NP_924937.1| rRNA (adenine-N6,N6)-dimethyltransferase [Gloeobacter violaceus PCC
7421]
gi|62900565|sp|Q7NJ41.1|RSMA_GLOVI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|35212558|dbj|BAC89932.1| rRNA (adenine-N6,N6)-dimethyltransferase [Gloeobacter violaceus PCC
7421]
Length = 272
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 139/277 (50%), Gaps = 31/277 (11%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQH L + +++ IV AG+ D +LEIGPG G+LT +LL V+AVE+D R V
Sbjct: 5 KRFGQHWLNDGAVLDRIVAAAGLACGDRVLEIGPGLGSLTARLLRQVP-VVAVEIDRRAV 63
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPY-FDICVANIPYQISSPLTFKLL--FHQPA- 147
+LQR+F R +++GD+L+ LP ++ VANIPY IS P+ KL QP
Sbjct: 64 AQLQRQFGG---DKRFVLVEGDILREALPEPANVVVANIPYNISGPILAKLTGSLAQPIR 120
Query: 148 -FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
FR +++ QKE R+ A PG + Y LSV Q A L +V + F PPPKVDS+V
Sbjct: 121 RFRTIVLLVQKELGQRIAAPPGSRTYGALSVRLQYLAECELLFEVPSHCFTPPPKVDSAV 180
Query: 207 VRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQ 265
+R+ PR Q +P D + F + K LKN L + + L A S
Sbjct: 181 IRLTPRPFALQADDPAHLDALVTRAFATRRKM------LKNCLKGWVETEKLLAAFASLD 234
Query: 266 NS--------------SLGNTEIGTDTPSLGDSNGDQ 288
S L N +D PS G + GD+
Sbjct: 235 ISPDARAEDLSVERFVQLSNRLAESDYPS-GAARGDR 270
>gi|421077159|ref|ZP_15538130.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans JBW45]
gi|392524547|gb|EIW47702.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans JBW45]
Length = 280
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 127/228 (55%), Gaps = 11/228 (4%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI K GQ+ L + +V+SIV+ A I D +LEIGPG G LT+ L EAG V AVE+
Sbjct: 20 GIRMSKKLGQNFLIDEHVVQSIVKAANITQGDAVLEIGPGIGTLTQGLAEAGAAVTAVEI 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFK 140
D R++ L + + Y N ++V+ GD+L+ D+ P + + VAN+PY I++P+
Sbjct: 80 DRRLIEVLAKTLEG--YEN-IRVVHGDILRIDIGKEVAAPRYKV-VANLPYYITTPIIMG 135
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL + M QKE A R+VA PG K Y LSV Q + + + V +F PPP
Sbjct: 136 LLEAHMPVDILVTMVQKEVAQRMVAVPGTKDYGSLSVAVQYYTKPEIMFVVPPASFIPPP 195
Query: 201 KVDSSVVRIEPR-KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
VDS+V+R R KP +VN + ++ F ++ KTLS+ + V
Sbjct: 196 AVDSAVIRCTVREKPPVEVNERIFFRVVKAAFAQRRKTLSNTLKTTGV 243
>gi|392963272|ref|ZP_10328698.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans DSM 17108]
gi|421056830|ref|ZP_15519747.1| dimethyladenosine transferase [Pelosinus fermentans B4]
gi|421059750|ref|ZP_15522312.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans B3]
gi|421065070|ref|ZP_15526873.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A12]
gi|421069349|ref|ZP_15530521.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A11]
gi|392438010|gb|EIW15872.1| dimethyladenosine transferase [Pelosinus fermentans B4]
gi|392450369|gb|EIW27422.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A11]
gi|392451096|gb|EIW28090.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans DSM 17108]
gi|392458395|gb|EIW34932.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans B3]
gi|392459757|gb|EIW36136.1| Ribosomal RNA small subunit methyltransferase A [Pelosinus
fermentans A12]
Length = 280
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 127/228 (55%), Gaps = 11/228 (4%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI K GQ+ L + +V+SIV+ A I D +LEIGPG G LT+ L EAG V AVE+
Sbjct: 20 GIRMSKKLGQNFLIDEHVVQSIVKAANITQDDAVLEIGPGIGTLTQGLAEAGAAVTAVEI 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFK 140
D R++ L + + Y N ++V+ GD+L+ D+ P + + VAN+PY I++P+
Sbjct: 80 DRRLIEVLAKTLEG--YEN-IRVVHGDILRIDIGKEVAAPRYKV-VANLPYYITTPIIMG 135
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL + M QKE A R+VA PG K Y LSV Q + + + V +F PPP
Sbjct: 136 LLEAHMPVDILVTMVQKEVAQRMVAVPGTKDYGSLSVAVQYYTKPEIMFIVPPASFIPPP 195
Query: 201 KVDSSVVRIEPR-KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNV 247
VDS+V+R R KP +VN + ++ F ++ KTLS+ + V
Sbjct: 196 AVDSAVIRCTVREKPPVEVNERIFFRVVKAAFAQRRKTLSNTLKTTGV 243
>gi|448361801|ref|ZP_21550414.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba asiatica DSM 12278]
gi|445649481|gb|ELZ02418.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba asiatica DSM 12278]
Length = 308
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 121/210 (57%), Gaps = 11/210 (5%)
Query: 57 TDVILEIGPGTGNLTKKLLEAGK---MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGD 113
T +LEIG GTG LT +LLE G V VE DS + L+ F + RL VI+GD
Sbjct: 70 TSHLLEIGGGTGALTDRLLELGTETDRVTVVERDSELASFLRTEFSDEIDAGRLTVIEGD 129
Query: 114 VLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYC 173
L+ DLP F V+N+PY +SS +TF+LL P R ++MFQ+EFA R+VA+PG Y
Sbjct: 130 ALEVDLPEFTASVSNLPYGVSSEITFRLL---PEGRPLVLMFQQEFAERMVAEPGTSEYG 186
Query: 174 RLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC--- 230
RLSV+TQ +A + + K F P P V S+VVR+ PR+P +V+ + D FLR
Sbjct: 187 RLSVSTQHYADAELVESIPKEAFSPSPAVQSAVVRLCPREPDYEVD--DEDFFLRFVKAL 244
Query: 231 FIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
F ++ KT+ + R +S L+ + A
Sbjct: 245 FTQRRKTIRNAIRNTAHISGLDAPESVVDA 274
>gi|298675523|ref|YP_003727273.1| dimethyladenosine transferase [Methanohalobium evestigatum Z-7303]
gi|298288511|gb|ADI74477.1| dimethyladenosine transferase [Methanohalobium evestigatum Z-7303]
Length = 269
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 115/192 (59%), Gaps = 7/192 (3%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + + IV A + D +LEIG G GNLT+K+ E + AVELD + L
Sbjct: 18 QHFLVDDNFLNQIVDSAELTENDTVLEIGAGIGNLTEKIAETVHKLYAVELDPNLCDILI 77
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
RF Y N +++I+GD+L +LP F+ VAN+PY ISS +TFKLL H+ F I+M+
Sbjct: 78 ERFAD--YDN-VEIIEGDILDIELPEFNKVVANLPYSISSHITFKLLKHE--FELGILMY 132
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q EFA R+V+ K Y RL+V T A S ++KV ++ F+P P+V S+VV++ PR
Sbjct: 133 QYEFARRMVSPKNSKDYSRLTVTTNFFADASIIMKVPRSAFKPAPEVKSAVVKLIPRPAS 192
Query: 216 PQVNPVEWDGFL 227
V V+ D FL
Sbjct: 193 FDV--VDEDFFL 202
>gi|15669218|ref|NP_248023.1| dimethyladenosine transferase [Methanocaldococcus jannaschii DSM
2661]
gi|27151565|sp|Q58435.1|RSMA_METJA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|1591684|gb|AAB99033.1| dimethyladenosine transferase (ksgA) [Methanocaldococcus jannaschii
DSM 2661]
Length = 275
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 123/217 (56%), Gaps = 22/217 (10%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ L + V V+ A + DV+LEIG G G LT++L + K V +E+D +
Sbjct: 6 KKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSL- 64
Query: 92 LELQRRFQSTPYSNRLK-------VIQGDVLKTDLPYFDI--CVANIPYQISSPLTFKLL 142
PY+N+LK +I GD LK DL D VAN+PYQISSP+TFKL+
Sbjct: 65 ---------EPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLI 115
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA R+VA+ G K Y RLSV Q A V + KV + F P PKV
Sbjct: 116 --KRGFDLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKV 173
Query: 203 DSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
S++V+I+P K + + N +D FLR F +NK++
Sbjct: 174 YSAIVKIKPNKGKYHIENENFFDDFLRAIFQHRNKSV 210
>gi|322369466|ref|ZP_08044031.1| dimethyladenosine transferase [Haladaptatus paucihalophilus DX253]
gi|320551198|gb|EFW92847.1| dimethyladenosine transferase [Haladaptatus paucihalophilus DX253]
Length = 294
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 132/245 (53%), Gaps = 4/245 (1%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
G+ ++ QH L + +V+ I A + + +LEIG G G LT +LL A V +E
Sbjct: 21 AGVRGDPNRDQHFLVDDRVVDRIPTYADEMNLEHVLEIGGGPGVLTDRLLAAADRVTVIE 80
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQ 145
D L+ F+S L V++GD L +LP F C+AN+PY ISS + F+LL
Sbjct: 81 RDPTFAEFLREEFRSECDDGGLTVVEGDALSVELPDFSACIANLPYGISSEIAFRLL--- 137
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P + ++MFQKEFA R+ A+ G Y RLSV Q +A V + V + F P P+V+S+
Sbjct: 138 PLGKPMLLMFQKEFAERMAAESGSDDYGRLSVTAQHYADVRVVETVPREAFAPQPEVESA 197
Query: 206 VVRIEPRKPRPQVNPVEWD-GFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
+VR PR+P +V+ + F++ F ++ KT+ + R +S L+ + AL+S
Sbjct: 198 IVRTIPREPEYEVDDEAFFLDFVKAVFTQRRKTIRNGIRNTAHISGLDDPDAVVDALESP 257
Query: 265 QNSSL 269
+ L
Sbjct: 258 DDDVL 262
>gi|289580774|ref|YP_003479240.1| dimethyladenosine transferase [Natrialba magadii ATCC 43099]
gi|448284440|ref|ZP_21475700.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba magadii ATCC 43099]
gi|289530327|gb|ADD04678.1| dimethyladenosine transferase [Natrialba magadii ATCC 43099]
gi|445570775|gb|ELY25334.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba magadii ATCC 43099]
Length = 281
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 132/241 (54%), Gaps = 17/241 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV------ILEIGPGTGNLTKKLLE 76
+ G+ ++ QH L + + ++ + TD+ +LEIG GTG LT +LLE
Sbjct: 8 IARAGVRGDPNRDQHFLVD----DRVLDRLPTYLTDIDADTSHVLEIGGGTGVLTDRLLE 63
Query: 77 ---AGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQI 133
A + VE D + LQ F + RL VI+GD L+ DLP F V+N+PY +
Sbjct: 64 TIGADDQLTVVERDPPLAEFLQEEFSDAIDAGRLTVIEGDALEVDLPEFTSSVSNLPYGV 123
Query: 134 SSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGK 193
SS +TF+LL P R ++MFQ+EFA R+VA+P Y RLSV+TQ +A + + K
Sbjct: 124 SSEITFRLL---PEQRPLVLMFQQEFAERMVAEPNTSEYGRLSVSTQHYADAELVESIPK 180
Query: 194 NNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
F PPP V S+VVR+ PR+P V N + F++ F ++ KT+ + R +S L+
Sbjct: 181 EAFSPPPAVQSAVVRLVPREPEYDVENEAFFLRFVKALFTQRRKTIRNGIRNTAHISGLQ 240
Query: 253 K 253
K
Sbjct: 241 K 241
>gi|292659595|pdb|3GRR|A Chain A, Crystal Structure Of The Complex Between S-Adenosyl
Homocysteine And Methanocaldococcus Jannaschi Dim1.
gi|292659596|pdb|3GRU|A Chain A, Crystal Structure Of The Complex Between Amp And
Methanocaldococcus Jannaschi Dim1
gi|292659597|pdb|3GRV|A Chain A, Crystal Structure Of The Complex Between Adenosine And
Methanocaldococcus Jannaschi Dim1
gi|292659598|pdb|3GRY|A Chain A, Crystal Structure Of The Complex Between S-Adenosyl
Methionine And Methanocaldococcus Jannaschi Dim1
Length = 295
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 122/217 (56%), Gaps = 22/217 (10%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ L + V V+ A + DV+LEIG G G LT++L + K V +E+D +
Sbjct: 26 KKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSL- 84
Query: 92 LELQRRFQSTPYSNRLK-------VIQGDVLKTDLPYFDI--CVANIPYQISSPLTFKLL 142
PY+N+LK +I GD LK DL D VAN+PYQISSP+TFKL+
Sbjct: 85 ---------EPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLI 135
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA R+VA G K Y RLSV Q A V + KV + F P PKV
Sbjct: 136 --KRGFDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKV 193
Query: 203 DSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
S++V+I+P K + + N +D FLR F +NK++
Sbjct: 194 YSAIVKIKPNKGKYHIENENFFDDFLRAIFQHRNKSV 230
>gi|325177054|emb|CCA21009.1| dimethyladenosine transferase putative [Albugo laibachii Nc14]
Length = 323
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 137/243 (56%), Gaps = 30/243 (12%)
Query: 35 GQHILKNPLLVESIV----------QKAGIKSTDV---ILEIGPGTGNLTKKLLEAGKM- 80
GQH+L + ++ SI+ QKAG ++ + +LEIG GTGNLT LL+
Sbjct: 21 GQHLLVSNDVIASIIKAADFPSLLLQKAGNQTEERRIRVLEIGSGTGNLTAALLDVDPTI 80
Query: 81 -VIAVELDSRMVLELQRRFQSTPYSNRL--------KVIQGDVLKTDLPYFDICVANIPY 131
V VE D+ MV L+ RF S +++L K+ D+ + D VANIPY
Sbjct: 81 QVHGVECDASMVKSLEDRFPSQLRTSQLQLHVNRIEKLRLSDLFSSSQGLIDAVVANIPY 140
Query: 132 QISSPLTFKLLFHQPAF----RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
Q+SS + +L+ + + +C I++ Q+EFA R++A P ++ Y RL+VNT L V
Sbjct: 141 QLSSLIIARLVSYLHKYPGSVKCIILLLQEEFAQRMLATPHNQNYGRLAVNTSLVGHVDA 200
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPV---EWDGFLRICFIRKNKTLSSIFRL 244
LLKVG F P P+VDS V+++ P PR +P E+D LRICF+RKNKTL ++
Sbjct: 201 LLKVGPEVFIPRPQVDSRVIKVTPHFPRFIRDPSFLREFDALLRICFLRKNKTLRALLTS 260
Query: 245 KNV 247
K++
Sbjct: 261 KSM 263
>gi|170723958|ref|YP_001751646.1| dimethyladenosine transferase [Pseudomonas putida W619]
gi|169761961|gb|ACA75277.1| dimethyladenosine transferase [Pseudomonas putida W619]
Length = 266
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K+ + +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F + ++ QGD LK D + V N+PY IS+PL F LL H
Sbjct: 71 PILQHKFAG---RDNFRLHQGDALKFDFNQLGVPARSLKVVGNLPYNISTPLIFHLLSHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 188 IVRLVPHEVLPHPAKDHLLLERVVREAFNQRRKTLRNTLK 227
>gi|225872206|ref|YP_002753661.1| dimethyladenosine transferase [Acidobacterium capsulatum ATCC
51196]
gi|259494240|sp|C1F127.1|RSMA_ACIC5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|225792765|gb|ACO32855.1| dimethyladenosine transferase [Acidobacterium capsulatum ATCC
51196]
Length = 283
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 120/222 (54%), Gaps = 12/222 (5%)
Query: 31 HKSK-GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
HK K GQ+ L + SIV+ G ++EIGPG G +T+ L + +IA+ELD
Sbjct: 22 HKPKLGQNFLVSEAACRSIVEALGNLGARTVVEIGPGKGAITELLANRAERLIAIELDRE 81
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLF 143
+ L+ RF + VI+ DVL+ DL + V N+PY ++S + L+
Sbjct: 82 LAPRLRERFAR---RETVTVIEDDVLRVDLSALARPGEKLLVVGNLPYYMTSEILLHLIR 138
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H+ A A++M Q+E A R+ A PG + Y LSV QLHARV LL + F PPP+V
Sbjct: 139 HEAAIERAVVMVQREVADRVAAGPGSRDYGLLSVTAQLHARVEKLLTLPPGAFSPPPEVY 198
Query: 204 SSVVR--IEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
S+V+R + R V+P + GFLR CF +K KTL + R
Sbjct: 199 STVLRWTMHSRTDELGVDPTRFTGFLRSCFAQKRKTLGNNLR 240
>gi|423093364|ref|ZP_17081160.1| dimethyladenosine transferase [Pseudomonas fluorescens Q2-87]
gi|397882263|gb|EJK98750.1| dimethyladenosine transferase [Pseudomonas fluorescens Q2-87]
Length = 272
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L +P +++ I++ K D +LEIGPG G LT+ LL++G + VELD +V
Sbjct: 11 KRFGQNFLHDPGVIDHILRSIHAKPDDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F S N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFASRSNFN---LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLSNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|374629545|ref|ZP_09701930.1| dimethyladenosine transferase [Methanoplanus limicola DSM 2279]
gi|373907658|gb|EHQ35762.1| dimethyladenosine transferase [Methanoplanus limicola DSM 2279]
Length = 257
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 110/174 (63%), Gaps = 3/174 (1%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + VE I A + +V LEIGPG G LT+ LL G VIAVELD ++V L+
Sbjct: 7 QHFLVDTEAVERISGYADVSGRNV-LEIGPGKGILTESLLRKGARVIAVELDGKLVPYLE 65
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
+RF S L ++ GD ++ ++P FD+ VAN+PY SS +TF+L+ F A++M+
Sbjct: 66 KRFSGEVKSGNLTIVHGDAIRCEIPDFDLVVANLPYSASSKITFRLIGM--GFEEAVLMY 123
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
QKEFAM+++A PG RLSV Q +A+V LL++ ++F P PKV S VVR+
Sbjct: 124 QKEFAMKMMALPGTSECGRLSVMVQTYAKVMPLLELLPSSFSPKPKVKSYVVRL 177
>gi|289193112|ref|YP_003459053.1| dimethyladenosine transferase [Methanocaldococcus sp. FS406-22]
gi|288939562|gb|ADC70317.1| dimethyladenosine transferase [Methanocaldococcus sp. FS406-22]
Length = 274
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 123/217 (56%), Gaps = 22/217 (10%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ L + V+ V+ A I D++LEIG G G LT++L + K V +E+D +
Sbjct: 6 KKLGQCFLIDKNFVKKAVESAEITKDDIVLEIGLGKGILTEELAKNAKKVYVIEIDKSL- 64
Query: 92 LELQRRFQSTPYSNRLK-------VIQGDVLKTDLPYFDI--CVANIPYQISSPLTFKLL 142
PY+N+LK +I GD LK +L D VAN+PYQISSP+TFKL+
Sbjct: 65 ---------EPYANKLKENYNNIEIIWGDALKVNLDELDFNKVVANLPYQISSPITFKLI 115
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA R+VA+ G K Y RLSV Q A V + KV F P PKV
Sbjct: 116 --KKGFDLAVLMYQYEFARRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPTAFSPRPKV 173
Query: 203 DSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
S++V+I+P K + + N +D FLR F +NK++
Sbjct: 174 YSAIVKIKPNKNKYHIENEDFFDDFLRTIFQHRNKSV 210
>gi|448391855|ref|ZP_21566950.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloterrigena salina JCM 13891]
gi|445665267|gb|ELZ17945.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloterrigena salina JCM 13891]
Length = 285
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 133/250 (53%), Gaps = 19/250 (7%)
Query: 23 LGAGGISFHKSKGQHILKN-------PLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLL 75
+ G+ + QH L + P +E I T +LEIG GTG LT +LL
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLEEI-----DADTSHVLEIGGGTGALTDRLL 62
Query: 76 EAGK---MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQ 132
G V VE D + L+ F + L VI+GD L+ DLP F ++N+PY
Sbjct: 63 AMGDGDDEVTVVERDRELAAFLREEFADEIAAGDLTVIEGDALEVDLPEFTASLSNLPYG 122
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
+SS ++F+LL P R ++MFQ+EFA R+VA+PG Y RLSV+TQ +A + +
Sbjct: 123 VSSEISFRLL---PEGRPLVLMFQREFAERMVAEPGTSEYGRLSVSTQHYAAPEIVETIP 179
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
K F PPP V+S+VVR+EPR P +V + + F++ F ++ KT+ + R ++ L
Sbjct: 180 KEAFSPPPAVESAVVRLEPRDPDYEVGDEAFFLRFVKALFTQRRKTIRNAIRNTAHITGL 239
Query: 252 EKNYRTLQAL 261
E ++A+
Sbjct: 240 EAPEAVVEAV 249
>gi|148643434|ref|YP_001273947.1| dimethyladenosine transferase [Methanobrevibacter smithii ATCC
35061]
gi|148552451|gb|ABQ87579.1| dimethyladenosine transferase, KsgA [Methanobrevibacter smithii
ATCC 35061]
Length = 303
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 112/192 (58%), Gaps = 3/192 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI +K+ GQ+ L + + I+Q + DV+LEIGPG G LT +L + K VI
Sbjct: 18 LNEYGIKLNKNLGQNYLIDRNKRDQIIQFGNLTKDDVVLEIGPGIGTLTIELAKRVKKVI 77
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
A+E DS + L+ R + N +++I D L + P FD ++N+PYQISSP+TFK L
Sbjct: 78 AIEQDSNICQILENRLKKENIDN-VELINDDALNVEFPKFDKIISNLPYQISSPITFKFL 136
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F+ AI+M+QKEFA R+ + G K Y RLS V L V +F P PKV
Sbjct: 137 NYD--FQLAILMYQKEFASRMNGKVGSKDYSRLSAMLYFKCDVDLLTGVSAESFIPKPKV 194
Query: 203 DSSVVRIEPRKP 214
DS+VVR+ P+ P
Sbjct: 195 DSTVVRLTPKLP 206
>gi|389793096|ref|ZP_10196271.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter fulvus Jip2]
gi|388435011|gb|EIL91932.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter fulvus Jip2]
Length = 262
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 118/222 (53%), Gaps = 13/222 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KS GQH L + ++ IV ++TD +LEIGPG G LT LL A + A+ELD+ ++
Sbjct: 7 KSFGQHFLHDSRYIDRIVSAMAPRATDFVLEIGPGEGALTLPLLTAAGKLTAIELDTDLI 66
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD--------ICVANIPYQISSPLTFKLLF 143
LQ R S L++I DVLK D N+PY ISSP+ F +
Sbjct: 67 PALQVRAASV---GELQIIHADVLKVDFTALAQRHGVDRLRIAGNLPYYISSPILFHCVE 123
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H A M QKE R+ A+PG K+Y RLSV QL RV L V FRPPPKV+
Sbjct: 124 HFGAIADMHFMLQKEVVERMAAEPGSKVYGRLSVMLQLACRVEPLFTVPPEAFRPPPKVE 183
Query: 204 SSVVRIEPRKPRPQVNPVEWDGF--LRICFIRKNKTLSSIFR 243
S+VVR+ P P+ + + D + ++ F ++ KTL++ +
Sbjct: 184 SAVVRLVPLAPQDRHDADAGDVYTVVKAAFAQRRKTLNNALK 225
>gi|293381472|ref|ZP_06627467.1| dimethyladenosine transferase [Lactobacillus crispatus 214-1]
gi|290921942|gb|EFD98949.1| dimethyladenosine transferase [Lactobacillus crispatus 214-1]
Length = 294
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 128/224 (57%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ A IK D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDQTAILGIVEAARIKKDDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P ++R K+I DVLK D +FD VAN+PY I++P+
Sbjct: 86 TILQNELPKKIDDQPLASRFKLILKDVLKADFKVDISDFFDFTKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL AQPG K Y L+++ Q V L+V N+F
Sbjct: 146 IFALAESDLHFTSLTLMMQKEVAERLEAQPGSKEYGPLTISVQTEMNVKLALQVSHNSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P PKVDSSVV + P K +P + N + +++CF ++ KTL++
Sbjct: 206 PRPKVDSSVVVLTPLKEKPAIENRKHFIWVVKMCFSQRRKTLNN 249
>gi|448356621|ref|ZP_21545348.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba chahannaoensis JCM 10990]
gi|445652733|gb|ELZ05616.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba chahannaoensis JCM 10990]
Length = 284
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 131/240 (54%), Gaps = 17/240 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV------ILEIGPGTGNLTKKLLE 76
+ G+ ++ QH L + + ++ + TD+ +LEIG GTG LT +LLE
Sbjct: 8 IARAGVRGDPNRDQHFLVD----DRVLDRLPTYLTDIDADTSHVLEIGGGTGVLTDRLLE 63
Query: 77 ---AGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQI 133
A + VE D + LQ F + RL VI+GD L+ DLP F V+N+PY +
Sbjct: 64 TIGADDHLSVVERDPPLAEFLQEEFSDAIDAGRLTVIEGDALEVDLPEFTSSVSNLPYGV 123
Query: 134 SSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGK 193
SS +TF+LL P R ++MFQ+EFA R+VA PG Y RLSV+TQ +A + + K
Sbjct: 124 SSQITFRLL---PEQRPLVLMFQQEFAERMVADPGTSEYGRLSVSTQHYADAELVESIPK 180
Query: 194 NNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
F PPP V S+VVR+ PR+P V N + F++ F ++ KT+ + R +S L+
Sbjct: 181 EAFSPPPAVQSAVVRLVPREPEYDVENEAFFLRFVKALFTQRRKTIRNGIRNTAHISGLQ 240
>gi|398844539|ref|ZP_10601601.1| dimethyladenosine transferase [Pseudomonas sp. GM84]
gi|398254476|gb|EJN39571.1| dimethyladenosine transferase [Pseudomonas sp. GM84]
Length = 266
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K+ + +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F + ++ QGD LK D + V N+PY IS+PL F LL H
Sbjct: 71 PILQHKFAG---RDNFRLHQGDALKFDFNQLGVPARSLKVVGNLPYNISTPLIFHLLSHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 188 IVRLVPHEVLPYPAKDHLLLERVVREAFNQRRKTLRNTLK 227
>gi|222445676|ref|ZP_03608191.1| hypothetical protein METSMIALI_01317 [Methanobrevibacter smithii
DSM 2375]
gi|222435241|gb|EEE42406.1| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2375]
Length = 306
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 112/192 (58%), Gaps = 3/192 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI +K+ GQ+ L + + I+Q + DV+LEIGPG G LT +L + K VI
Sbjct: 21 LNEYGIKLNKNLGQNYLIDRNKRDQIIQFGNLTKDDVVLEIGPGIGTLTIELAKRVKKVI 80
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
A+E DS + L+ R + N +++I D L + P FD ++N+PYQISSP+TFK L
Sbjct: 81 AIEQDSNICQILENRLKKENIDN-VELINDDALNVEFPKFDKIISNLPYQISSPITFKFL 139
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F+ AI+M+QKEFA R+ + G K Y RLS V L V +F P PKV
Sbjct: 140 NYD--FQLAILMYQKEFASRMNGKVGSKDYSRLSAMLYFKCDVDLLTGVSAESFIPKPKV 197
Query: 203 DSSVVRIEPRKP 214
DS+VVR+ P+ P
Sbjct: 198 DSTVVRLTPKLP 209
>gi|330508534|ref|YP_004384962.1| dimethyladenosine transferase [Methanosaeta concilii GP6]
gi|328929342|gb|AEB69144.1| dimethyladenosine transferase [Methanosaeta concilii GP6]
Length = 247
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 115/198 (58%), Gaps = 11/198 (5%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQH L + +V+SIV A + D +LEIGPG G LT++L V AVE+D + L
Sbjct: 4 GQHFLIDRSIVDSIVSHADLGLEDWVLEIGPGEGILTRELAARAGRVYAVEIDPDLAASL 63
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+ P + VI D L LP ++ V+N+PY ISS +T++LL +P F A++M
Sbjct: 64 ---CNTAP---NVMVIHADALTVRLPQYNKIVSNLPYNISSKITYRLL-SRP-FDLAVLM 115
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
FQKEFA RL A+P K+Y RL + + + L V + FRP P VDS++VR+ PR
Sbjct: 116 FQKEFAQRLKAEPASKIYGRLGMVAGFFSHIEILQNVSRKAFRPVPDVDSAIVRLRPRTE 175
Query: 215 RPQVNPVEWDGFLRICFI 232
RPQV+P F+R+ I
Sbjct: 176 RPQVDP---RAFMRLADI 190
>gi|318041295|ref|ZP_07973251.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Synechococcus sp. CB0101]
Length = 270
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 136/254 (53%), Gaps = 24/254 (9%)
Query: 29 SFHKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAV 84
+ H+++ GQH LK+ +++ I+ A + + D +LE+GPG G LT++LL + V AV
Sbjct: 4 AAHRTRKRFGQHWLKDERVLDQILAAAELSAADTVLEVGPGRGALTERLLASPAAAVRAV 63
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL-- 142
ELD +V LQ RF P R + GDVL LP I VANIPY I+ PL +L+
Sbjct: 64 ELDRDLVEGLQERFSGDP---RFDLTPGDVLAVPLPEAGIVVANIPYNITGPLLERLVGR 120
Query: 143 ----FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
QP +R +++ Q+E R+ A+PG Y LSV QL AR S + V F+P
Sbjct: 121 LDRPVAQP-YRRLVLLMQQEVGERIRARPGSSAYSALSVRMQLLARCSTVCLVPPRCFQP 179
Query: 199 PPKVDSSVVRIEPRKPRPQVNPV---EWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNY 255
PPKV S VV I+P P Q++P + LR CF + K L+N L+ L+
Sbjct: 180 PPKVMSEVVAIDPLPPDQQLDPALARTVETLLRRCFAARRKM------LRNTLAGLQPPD 233
Query: 256 RTLQALQSSQNSSL 269
+ LQAL + L
Sbjct: 234 Q-LQALTAEAGIGL 246
>gi|429192096|ref|YP_007177774.1| dimethyladenosine transferase [Natronobacterium gregoryi SP2]
gi|448323875|ref|ZP_21513323.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronobacterium gregoryi SP2]
gi|429136314|gb|AFZ73325.1| dimethyladenosine transferase [Natronobacterium gregoryi SP2]
gi|445620388|gb|ELY73888.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natronobacterium gregoryi SP2]
Length = 280
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 121/207 (58%), Gaps = 11/207 (5%)
Query: 60 ILEIGPGTGNLTKKLLE-AGK--MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
+LEIG GTG LT +LL AG+ V VE D + L+ F + RL VI+GD L+
Sbjct: 47 LLEIGGGTGALTDRLLALAGEDGAVTVVERDRDLAAFLREEFADAIDAGRLTVIEGDALE 106
Query: 117 TDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS 176
DLP F ++N+PY +SS ++F+LL P + ++MFQ+EFA R+VA+PG Y RLS
Sbjct: 107 VDLPDFTASISNLPYGVSSEISFRLL---PEGKPLVLMFQQEFAERMVAEPGTSEYGRLS 163
Query: 177 VNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIR 233
V+TQ +A + + K F PPP V+S+VVR+ PR+P +V D FLR F +
Sbjct: 164 VSTQHYADAELVETIPKEAFSPPPAVESAVVRLRPREPEYEVE--NEDFFLRFVKALFTQ 221
Query: 234 KNKTLSSIFRLKNVLSMLEKNYRTLQA 260
+ KT+ + R +S LE+ + A
Sbjct: 222 RRKTIRNAIRNTAHISGLEEPEAVVDA 248
>gi|395646265|ref|ZP_10434125.1| Ribosomal RNA small subunit methyltransferase A [Methanofollis
liminatans DSM 4140]
gi|395443005|gb|EJG07762.1| Ribosomal RNA small subunit methyltransferase A [Methanofollis
liminatans DSM 4140]
Length = 258
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 114/204 (55%), Gaps = 4/204 (1%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L++ +E IV + + +V LEIGPG G LT LL+AG V A+ELD +V L+
Sbjct: 7 QHFLRDRRAIERIVALSEVSGRNV-LEIGPGEGVLTAALLQAGAKVTAIELDPSLVEGLE 65
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
RF + +I GD ++ P FDI VAN+PY SSP+TF+LL F A++M+
Sbjct: 66 ERFAGEIRAGTFTLIHGDAVRVPYPAFDIVVANLPYSASSPITFRLL--DAGFERAVLMY 123
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q+EFA R+ A G RLSV Q +A V + F PPP+V S+VVR+ P +P
Sbjct: 124 QREFAERMAAPVGTPECGRLSVMVQTYAEVKLCFNLPPGAFSPPPQVASTVVRLTPHEPP 183
Query: 216 PQVNPVE-WDGFLRICFIRKNKTL 238
+ E + +R F + KT+
Sbjct: 184 HYIADREVYAAVVRELFSHRRKTV 207
>gi|242556502|pdb|3FYC|A Chain A, Crystal Structure Of Dim1 From The Thermophilic Archeon,
Methanocaldococcus Jannaschi
gi|242556503|pdb|3FYC|B Chain B, Crystal Structure Of Dim1 From The Thermophilic Archeon,
Methanocaldococcus Jannaschi
Length = 265
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 121/214 (56%), Gaps = 22/214 (10%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
Q L + V V+ A + DV+LEIG G G LT++L + K V +E+D +
Sbjct: 2 AQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSL---- 57
Query: 95 QRRFQSTPYSNRLK-------VIQGDVLKTDLPYFDI--CVANIPYQISSPLTFKLLFHQ 145
PY+N+LK +I GD LK DL D VAN+PYQISSP+TFKL+ +
Sbjct: 58 ------EPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLI--K 109
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
F A++M+Q EFA R+VA+ G K Y RLSV Q A V + KV + F P PKV S+
Sbjct: 110 RGFDLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSA 169
Query: 206 VVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
+V+I+P K + + N +D FLR F +NK++
Sbjct: 170 IVKIKPNKGKYHIENENFFDDFLRAIFQHRNKSV 203
>gi|359403108|ref|ZP_09196015.1| dimethyladenosine transferase [Spiroplasma melliferum KC3]
gi|438118344|ref|ZP_20871321.1| dimethyladenosine transferase [Spiroplasma melliferum IPMB4A]
gi|357968325|gb|EHJ90834.1| dimethyladenosine transferase [Spiroplasma melliferum KC3]
gi|434155771|gb|ELL44689.1| dimethyladenosine transferase [Spiroplasma melliferum IPMB4A]
Length = 282
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 122/232 (52%), Gaps = 16/232 (6%)
Query: 19 QGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG 78
Q Q + GI KSKGQ+ L N + IV A ILEIGPG G LT +L
Sbjct: 4 QNQEMRTEGIVAKKSKGQNFLTNTHFINLIVDSAFDLPNTNILEIGPGMGALTSSILLKA 63
Query: 79 KMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI----------CVAN 128
++ VE+DS +V L +F+ L +IQ D+L DL + ++N
Sbjct: 64 NKLVCVEIDSTLVEYLTLKFKD----QNLTIIQADILTLDLEKLFLTEFLDNNPISIISN 119
Query: 129 IPYQISSPLTFKLL-FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
IPY I+SP+ FKLL P + I+M QKE R++AQP K Y LSV Q ++ +
Sbjct: 120 IPYYITSPIIFKLLKIKNPKVKEIILMMQKEVGERIMAQPNSKNYNSLSVVCQFYSDIEK 179
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQ-VNPVEWDGFLRICFIRKNKTL 238
+ VG+NNF P PKVDS V++ + K P +N E+ F+R+ F K KT+
Sbjct: 180 VSLVGRNNFVPVPKVDSIVLKFKLNKKYPALINDKEFIKFIRMMFATKRKTI 231
>gi|418029917|ref|ZP_12668434.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
gi|354688380|gb|EHE88419.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
Length = 275
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 131/232 (56%), Gaps = 17/232 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + V+ IV+ AGI+ D ++E+GPG G+LT++LL AG V A E+D +
Sbjct: 5 KNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEVDQSLP 64
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL + R K+I DVLK D +FD+ VAN+PY I++P+
Sbjct: 65 EILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYYITTPI 124
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F LL F +M QKE A RL AQPG K Y LS+ Q V L+VG +F
Sbjct: 125 IFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFM 184
Query: 198 PPPKVDSSVVRIEP-RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVL 248
P PKVDS+VV + P KP + +++ +++CF ++ KTL++ LK +L
Sbjct: 185 PQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLAN--NLKTLL 234
>gi|288869605|ref|ZP_05975193.2| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2374]
gi|288860560|gb|EFC92858.1| dimethyladenosine transferase [Methanobrevibacter smithii DSM 2374]
Length = 306
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 111/192 (57%), Gaps = 3/192 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI +K+ GQ+ L + + I+Q + DV+LEIGPG G LT +L + K VI
Sbjct: 21 LNEYGIKLNKNLGQNYLIDRNKRDQIIQFGNLTKDDVVLEIGPGIGTLTIELAKRVKKVI 80
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
A+E DS + L+ R + N + +I D L + P FD ++N+PYQISSP+TFK L
Sbjct: 81 AIEQDSNICQILENRLKKENIDN-VDLINDDALNVEFPKFDKIISNLPYQISSPITFKFL 139
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F+ AI+M+QKEFA R+ + G K Y RLS V L V +F P PKV
Sbjct: 140 NYD--FQLAILMYQKEFASRMNGKVGSKDYSRLSAMLYFKCDVDLLTGVSAESFIPKPKV 197
Query: 203 DSSVVRIEPRKP 214
DS+VVR+ P+ P
Sbjct: 198 DSTVVRLTPKLP 209
>gi|418035193|ref|ZP_12673651.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
gi|354690611|gb|EHE90555.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
Length = 275
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 131/232 (56%), Gaps = 17/232 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + V+ IV+ AGI+ D ++E+GPG G+LT++LL AG V A E+D +
Sbjct: 5 KNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEVDQSLP 64
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL + R K+I DVLK D +FD+ VAN+PY I++P+
Sbjct: 65 EILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYYITTPI 124
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F LL F +M QKE A RL AQPG K Y LS+ Q V L+VG +F
Sbjct: 125 IFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFM 184
Query: 198 PPPKVDSSVVRIEP-RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVL 248
P PKVDS+VV + P KP + +++ +++CF ++ KTL++ LK +L
Sbjct: 185 PQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLAN--NLKTLL 234
>gi|404398415|ref|ZP_10989999.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fuscovaginae UPB0736]
Length = 272
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 117/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ KS D +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGVIDRILRAIRAKSEDRMLEIGPGQGALTEGLLSSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F S P ++ QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFASKP---NFQLHQGDALKFDFTTLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 NLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P P P + + +R F ++ KTL + +
Sbjct: 188 IVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|448578417|ref|ZP_21643852.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax larsenii JCM 13917]
gi|445726958|gb|ELZ78574.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax larsenii JCM 13917]
Length = 287
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 122/221 (55%), Gaps = 7/221 (3%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIA 83
G S + QH L + +V+ I + TD+ +LEIG G G LT +LL+ V
Sbjct: 24 AGASGDPDRDQHFLVDDRVVDRIPTYLP-EDTDLSHVLEIGGGPGVLTDRLLDVADRVTV 82
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
VE D L+R F + RL V++GD L+ DLP F CV+N+PY ISS ++F+LL
Sbjct: 83 VEQDRTFADHLRREFAEEVEAGRLTVLEGDALEIDLPDFSACVSNLPYGISSEISFRLL- 141
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
P + ++MFQKEF R+ A+ G Y RLSV+ Q + V V + F P P V
Sbjct: 142 --PEGKPLVLMFQKEFGERMAAESGTSEYGRLSVSAQHYGDVDVCEIVPREAFDPQPAVQ 199
Query: 204 SSVVRIEPRKPRPQVNPVEWD-GFLRICFIRKNKTLSSIFR 243
S++VRIEPR P +V+ E+ F++ F ++ KT+ + R
Sbjct: 200 SAIVRIEPRAPDYEVDDEEFFLDFVKALFTQRRKTIRNGIR 240
>gi|242556505|pdb|3FYD|A Chain A, Crystal Structure Of Dim1 From The Thermophilic Archeon,
Methanocaldococcus Jannaschi
Length = 263
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 22/205 (10%)
Query: 44 LVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPY 103
V V+ A + DV+LEIG G G LT++L + K V +E+D + PY
Sbjct: 9 FVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSL----------EPY 58
Query: 104 SNRLK-------VIQGDVLKTDLPYFDI--CVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+N+LK +I GD LK DL D VAN+PYQISSP+TFKL+ + F A++M
Sbjct: 59 ANKLKELYNNIEIIWGDALKVDLNKLDFNKVVANLPYQISSPITFKLI--KRGFDLAVLM 116
Query: 155 FQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
+Q EFA R+VA G K Y RLSV Q A V + KV + F P PKV S++V+I+P K
Sbjct: 117 YQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKG 176
Query: 215 RPQV-NPVEWDGFLRICFIRKNKTL 238
+ + N +D FLR F +NK++
Sbjct: 177 KYHIENENFFDDFLRAIFQHRNKSV 201
>gi|399522520|ref|ZP_10763183.1| dimethyladenosine transferase [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399109384|emb|CCH39744.1| dimethyladenosine transferase [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 269
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K + +LEIGPG G +T+ LL +G + +ELD ++
Sbjct: 10 KRFGQNFLHDAGVIDRILRAIRAKEDERLLEIGPGQGAITEGLLGSGAQLDVIELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F P R ++ QGD LK D D V N+PY IS+PL F LL +
Sbjct: 70 PILQNKFGDNP---RFRLNQGDALKFDFARLDAPPRSLRVVGNLPYNISTPLIFHLLDNA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 127 PLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 226
>gi|409350932|ref|ZP_11233871.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
equicursoris CIP 110162]
gi|407877088|emb|CCK85929.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
equicursoris CIP 110162]
Length = 293
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 129/224 (57%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + V+ I + AGI+ D ++EIGPG G+LT++LL G V A E+D +
Sbjct: 26 KNLGQNFLVDLNAVQGIAEAAGIQEGDQVIEIGPGIGSLTEQLLLYGGKVFAYEVDDSLP 85
Query: 91 -VLE--LQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+LE L +R P S+R K++ DVLK + +FD+ VAN+PY I++P+
Sbjct: 86 EILETELPQRIDGEPLSSRFKLVLKDVLKANFAEDLAGFFDLTKPVKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F LL F +M QKE A RL A PG+K Y L++ Q V L VG +F
Sbjct: 146 IFSLLESGLNFTSLTLMMQKEVADRLAAGPGNKDYGPLTIAVQTRMAVDLALNVGHASFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P K V +P +++ +++CF ++ KTLS+
Sbjct: 206 PQPKVDSAVVVLTPLKTPVDVGDPEKFNRLVKLCFAQRRKTLSN 249
>gi|226946690|ref|YP_002801763.1| dimethyladenosine transferase [Azotobacter vinelandii DJ]
gi|226721617|gb|ACO80788.1| dimethyladenosine transferase [Azotobacter vinelandii DJ]
Length = 272
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 123/226 (54%), Gaps = 13/226 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ ++ + ++EIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHPRADERLVEIGPGQGALTEGLLGSGARLDVIELDLDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L+ +F P R + QGD LK D P+ V N+PY IS+PL F LL H
Sbjct: 71 PLLKLKFGLEP---RFHLHQGDALKFDFARLCGTPHSLRIVGNLPYNISTPLIFHLLEHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A+PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERLAAEPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
+VR+ P + P P +P + +R F ++ KTL + LK +L+
Sbjct: 188 IVRLVPHETLPHPARDPALLERIVREAFNQRRKTLRNT--LKGLLA 231
>gi|385815093|ref|YP_005851484.1| Dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325125130|gb|ADY84460.1| Dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 296
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 131/232 (56%), Gaps = 17/232 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + V IV+ AGI+ D ++E+GPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDLDAVRGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVTAYEVDQSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL + R K+I DVLK D +FD+ VAN+PY I++P+
Sbjct: 86 EILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F LL + F +M QKE A RL AQPG K Y LS+ Q V L+VG +F
Sbjct: 146 IFNLLEYSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFM 205
Query: 198 PPPKVDSSVVRIEP-RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVL 248
P PKVDS+VV + P KP + +++ +++CF ++ KTL++ LK +L
Sbjct: 206 PQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLAN--NLKTLL 255
>gi|167031448|ref|YP_001666679.1| dimethyladenosine transferase [Pseudomonas putida GB-1]
gi|166857936|gb|ABY96343.1| dimethyladenosine transferase [Pseudomonas putida GB-1]
Length = 266
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K+ + +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGVIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F ++ QGD LK D + V N+PY IS+PL F LL H
Sbjct: 71 PILQHKFAD---RGNFRLHQGDALKFDFNQLGVPPRSLKVVGNLPYNISTPLIFHLLSHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + +R F ++ KTL + +
Sbjct: 188 IVRLVPHEVLPHPAKDAKLLEQVVREAFNQRRKTLRNTMK 227
>gi|336122175|ref|YP_004576950.1| ribosomal RNA small subunit methyltransferase A
[Methanothermococcus okinawensis IH1]
gi|334856696|gb|AEH07172.1| Ribosomal RNA small subunit methyltransferase A
[Methanothermococcus okinawensis IH1]
Length = 279
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 125/213 (58%), Gaps = 12/213 (5%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
+K GQ LK+ +V+ V A I D++LEIG G G LTK+L + K V +ELD R+
Sbjct: 11 NKKLGQCFLKDKNIVKKAVNAADINKNDIVLEIGLGKGILTKELAKNAKKVYVIELDMRL 70
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDLP--YFDICVANIPYQISSPLTFKLLFHQPAF 148
+ P +++I D LK +L F+ VAN+PYQISSP+TFK L + F
Sbjct: 71 EPFAEEVIAEYP---NVEIIWNDALKVNLDELNFNKIVANLPYQISSPITFKFL--KKDF 125
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
A++M+Q EFA R++A+ G K Y RLSV+ Q +A V + KV + F P PKVDS++V+
Sbjct: 126 DVAVLMYQYEFAKRMIAKEGTKEYGRLSVSVQYYANVQFVCKVSPSAFSPKPKVDSAIVK 185
Query: 209 IEPRKPRPQVNPVE----WDGFLRICFIRKNKT 237
I ++P ++ +E ++ +R F KNKT
Sbjct: 186 ITKKEPN-ELYYLEDKEFFENVVRALFQHKNKT 217
>gi|26987143|ref|NP_742568.1| dimethyladenosine transferase [Pseudomonas putida KT2440]
gi|386010061|ref|YP_005928338.1| KsgA [Pseudomonas putida BIRD-1]
gi|395446781|ref|YP_006387034.1| dimethyladenosine transferase [Pseudomonas putida ND6]
gi|397694911|ref|YP_006532792.1| Dimethyladenosine transferase [Pseudomonas putida DOT-T1E]
gi|421524947|ref|ZP_15971568.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas putida LS46]
gi|33516928|sp|Q88QT6.1|RSMA_PSEPK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|24981775|gb|AAN66032.1|AE016232_5 dimethyladenosine transferase [Pseudomonas putida KT2440]
gi|313496767|gb|ADR58133.1| KsgA [Pseudomonas putida BIRD-1]
gi|388560778|gb|AFK69919.1| dimethyladenosine transferase [Pseudomonas putida ND6]
gi|397331641|gb|AFO48000.1| Dimethyladenosine transferase [Pseudomonas putida DOT-T1E]
gi|402751410|gb|EJX11923.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas putida LS46]
Length = 267
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K+ + +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F + ++ QGD LK D + V N+PY IS+PL F LL H
Sbjct: 71 PILQHKFAD---RSNFRLHQGDALKFDFNQLGVPPRSLKVVGNLPYNISTPLIFHLLSHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 188 IVRLVPHEVLPFPAKDHLLLERVVREAFNQRRKTLRNTMK 227
>gi|398841896|ref|ZP_10599102.1| dimethyladenosine transferase [Pseudomonas sp. GM102]
gi|398107260|gb|EJL97266.1| dimethyladenosine transferase [Pseudomonas sp. GM102]
Length = 272
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LTK LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTKGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F S + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAS---KSNFHLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLHNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKL 228
>gi|448329924|ref|ZP_21519218.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema versiforme JCM 10478]
gi|445613112|gb|ELY66822.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema versiforme JCM 10478]
Length = 279
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 129/243 (53%), Gaps = 10/243 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKM 80
+ G+ + QH L + +++ + D +LEIG GTG LT +LL G
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPSYLTESDADTSHLLEIGGGTGVLTDRLLAVGDE 67
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V VE D + L+ F + L V+QGD L+ DLP F V+N+PY +SS + F+
Sbjct: 68 VTVVERDRELAEFLREEFADEIAAGELTVVQGDALEVDLPEFTASVSNLPYGVSSEIAFR 127
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
L P + ++MFQ+EFA R+VA+P Y RLSV++Q +A + + + K F PPP
Sbjct: 128 LF---PEKKPLVLMFQQEFAERMVAEPNTAEYGRLSVSSQHYADIELVESIPKEAFSPPP 184
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFRLKNVLSMLEKNYRT 257
V S+VVR PR+P +++ + D FLR F ++ KT+ + R +S L +
Sbjct: 185 AVQSAVVRAIPREPDYEID--DEDFFLRFVKALFTQRRKTIRNAIRNTGHISGLAEPEAV 242
Query: 258 LQA 260
++A
Sbjct: 243 VEA 245
>gi|261402315|ref|YP_003246539.1| dimethyladenosine transferase [Methanocaldococcus vulcanius M7]
gi|261369308|gb|ACX72057.1| dimethyladenosine transferase [Methanocaldococcus vulcanius M7]
Length = 274
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 121/217 (55%), Gaps = 22/217 (10%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ L + V V+ A + D++LEIG G G LT++L + K V +E+D +
Sbjct: 6 KKLGQCFLIDKNFVNKAVESANLTKDDIVLEIGLGKGILTEELAKHAKKVYVIEIDKSL- 64
Query: 92 LELQRRFQSTPYSNRLK-------VIQGDVLKTDLPYFDI--CVANIPYQISSPLTFKLL 142
Y+N+LK +I D LK DL D +AN+PYQISSP+TFKL+
Sbjct: 65 ---------ESYANKLKENYNNIEIIWNDALKVDLNTLDFNKVIANLPYQISSPITFKLI 115
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA R+VA+ G K Y RLSV Q A V + KV F P PK+
Sbjct: 116 --KKGFDLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEFITKVPPTAFHPKPKI 173
Query: 203 DSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
S++++I+ K + Q+ N + +D FLR F +NK++
Sbjct: 174 HSALIKIKLNKNKYQIENEIFFDNFLRAVFQHRNKSV 210
>gi|104773499|ref|YP_618479.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513494|ref|YP_812400.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|118600873|sp|Q1GBR1.1|RSMA_LACDA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|122275736|sp|Q04C60.1|RSMA_LACDB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|103422580|emb|CAI97183.1| Dimethyladenosine transferase (16S rRNA dimethylase) [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|116092809|gb|ABJ57962.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 296
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 131/232 (56%), Gaps = 17/232 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + V+ IV+ AGI+ D ++E+GPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEVDQSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL + R K+I DVLK D +FD+ VAN+PY I++P+
Sbjct: 86 EILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F LL F +M QKE A RL AQPG K Y LS+ Q V L+VG +F
Sbjct: 146 IFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFM 205
Query: 198 PPPKVDSSVVRIEP-RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVL 248
P PKVDS+VV + P KP + +++ +++CF ++ KTL++ LK +L
Sbjct: 206 PQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLAN--NLKTLL 255
>gi|300812073|ref|ZP_07092521.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496912|gb|EFK31986.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 296
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 131/232 (56%), Gaps = 17/232 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + V+ IV+ AGI+ D ++E+GPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEVDQSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL + R K+I DVLK D +FD+ VAN+PY I++P+
Sbjct: 86 EILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLGKPVKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F LL F +M QKE A RL AQPG K Y LS+ Q V L+VG +F
Sbjct: 146 IFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFM 205
Query: 198 PPPKVDSSVVRIEP-RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVL 248
P PKVDS+VV + P KP + +++ +++CF ++ KTL++ LK +L
Sbjct: 206 PQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLAN--NLKTLL 255
>gi|330505265|ref|YP_004382134.1| dimethyladenosine transferase [Pseudomonas mendocina NK-01]
gi|328919551|gb|AEB60382.1| dimethyladenosine transferase [Pseudomonas mendocina NK-01]
Length = 269
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 119/220 (54%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K + +LEIGPG G +T+ LL +G + +ELD ++
Sbjct: 10 KRFGQNFLHDAGVIDRILRAIRAKEDERLLEIGPGQGAITEGLLGSGAQLDVIELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
LQ +F + P R ++ QGD LK D + V N+PY IS+PL F LL +
Sbjct: 70 PILQNKFGANP---RFRLNQGDALKFDFARLEAAPRSLRVVGNLPYNISTPLIFHLLDNA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 127 PLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 226
>gi|422845053|ref|ZP_16891763.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|325684673|gb|EGD26827.1| dimethyladenosine transferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 296
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 131/232 (56%), Gaps = 17/232 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + V+ IV+ AGI+ D ++E+GPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEVDQSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL + R K+I DVLK D +FD+ VAN+PY I++P+
Sbjct: 86 EILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F LL F +M QKE A RL AQPG K Y LS+ Q V L+VG +F
Sbjct: 146 IFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFM 205
Query: 198 PPPKVDSSVVRIEP-RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVL 248
P PKVDS+VV + P KP + +++ +++CF ++ KTL++ LK +L
Sbjct: 206 PQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLAN--NLKTLL 255
>gi|408410474|ref|ZP_11181687.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus sp.
66c]
gi|408410695|ref|ZP_11181899.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus sp.
66c]
gi|407875161|emb|CCK83705.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus sp.
66c]
gi|407875382|emb|CCK83493.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus sp.
66c]
Length = 293
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 129/224 (57%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + V+ I + AGI+ D ++EIGPG G+LT++LL G V A E+D +
Sbjct: 26 KNLGQNFLVDLNAVQGIAEAAGIQEGDQVIEIGPGIGSLTEQLLLYGGKVFAYEVDDSLP 85
Query: 91 -VLE--LQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+LE L +R P S+R K++ DVLK + +FD+ VAN+PY I++P+
Sbjct: 86 EILETELPQRIDGEPLSSRFKLVLKDVLKANFAEDLAGFFDLTKPVKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F LL F +M QKE A RL A PG K Y L++ Q V+ L VG +F
Sbjct: 146 IFSLLESGLNFTSLTLMMQKEVADRLAAGPGSKDYGPLTIAVQTRMAVNLALNVGHASFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P K V +P +++ +++CF ++ KTLS+
Sbjct: 206 PQPKVDSAVVVLTPLKTPVDVGDPEKFNRLVKLCFAQRRKTLSN 249
>gi|339485334|ref|YP_004699862.1| dimethyladenosine transferase [Pseudomonas putida S16]
gi|431800453|ref|YP_007227356.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Pseudomonas
putida HB3267]
gi|338836177|gb|AEJ10982.1| dimethyladenosine transferase [Pseudomonas putida S16]
gi|430791218|gb|AGA71413.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas putida HB3267]
Length = 266
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 117/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K+ + +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F + ++ QGD LK D + V N+PY IS+PL F LL H
Sbjct: 71 PILQHKFAD---RSNFRLHQGDALKFDFNQLGVPPRSLKVVGNLPYNISTPLIFHLLSHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + +R F ++ KTL + +
Sbjct: 188 IVRLVPHEVLPYPAKDAKLLEQVVREAFNQRRKTLRNTMK 227
>gi|313123062|ref|YP_004033321.1| ribosomal RNA small subunit methyltransferase a [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312279625|gb|ADQ60344.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 296
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 131/232 (56%), Gaps = 17/232 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + V+ IV+ AGI+ D ++E+GPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDLDAVQGIVRAAGIEPGDQVVEVGPGIGSLTEQLLLAGGKVAAYEVDHSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL + R K+I DVLK D +FD+ VAN+PY I++P+
Sbjct: 86 EILANELPEKVDGQDLDQRFKLIMKDVLKADFATDLAGFFDLSKPVKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F LL F +M QKE A RL AQPG K Y LS+ Q V L+VG +F
Sbjct: 146 IFNLLESSLDFTSLTLMMQKEVAERLAAQPGSKAYGPLSIAVQTQMSVDLALEVGHASFM 205
Query: 198 PPPKVDSSVVRIEP-RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVL 248
P PKVDS+VV + P KP + +++ +++CF ++ KTL++ LK +L
Sbjct: 206 PQPKVDSAVVVLTPLEKPADVGDRKQFNRVVKLCFAQRRKTLAN--NLKTLL 255
>gi|45358550|ref|NP_988107.1| dimethyladenosine transferase [Methanococcus maripaludis S2]
gi|62900533|sp|Q6LYK4.1|RSMA_METMP RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|44921308|emb|CAF30543.1| dimethyladenosine transferase related protein (rRNA methylase)
[Methanococcus maripaludis S2]
Length = 267
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 14/213 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K GQ LK+ V+ + +A I + D++LE+G G G LTK+L + K V +ELD R+
Sbjct: 5 KKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTKELAKIAKKVYVIELDERLK 64
Query: 91 --VLELQRRFQSTPYSNRLKVIQGDVLKTDLPY--FDICVANIPYQISSPLTFKLLFHQP 146
E+ F++ +++I D LK DL F+ VAN+PYQISSP+TFK L +
Sbjct: 65 PFADEITAEFEN------VEIIWSDALKVDLKNLGFNKIVANLPYQISSPITFKFL--EE 116
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F A++M+Q EFA R+ +P K Y RLSV Q +A V + KV + F P P V+S++
Sbjct: 117 DFETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNSAI 176
Query: 207 VRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTL 238
V++ R+P+ V E + L+ F +N+T+
Sbjct: 177 VKLTKREPKYHVKDEEFFKKVLKAVFQHRNRTI 209
>gi|268318145|ref|YP_003291864.1| dimethyladenosine transferase [Rhodothermus marinus DSM 4252]
gi|262335679|gb|ACY49476.1| dimethyladenosine transferase [Rhodothermus marinus DSM 4252]
Length = 266
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 120/221 (54%), Gaps = 17/221 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQH L +P + IV D ++EIGPGTG LT LLE + A+E+D R V
Sbjct: 9 KRLGQHFLVDPNIARKIVAALQAAPEDPVVEIGPGTGALTGLLLERYPHLTAIEIDPRAV 68
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC---------VANIPYQISSPLTFKLL 142
EL+ R+ L V Q DVLK + + ++ V N+PY I+SP+ F LL
Sbjct: 69 AELKARWPE------LDVRQEDVLKVN--WAELAEEKGGRLHVVGNLPYYITSPILFALL 120
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ A A++M Q+E A RLVA PG K Y LSV QL A + L V ++ FRP P+V
Sbjct: 121 DAREALAEAVLMMQREVAERLVAPPGSKTYGILSVAAQLWATPALLFPVSRHVFRPKPRV 180
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+S+VVR+ +P P V+P +R F ++ KTL + R
Sbjct: 181 ESAVVRLTFERPLPDVDPELLRQVIRTAFNQRRKTLRNSLR 221
>gi|345304440|ref|YP_004826342.1| ribosomal RNA small subunit methyltransferase A [Rhodothermus
marinus SG0.5JP17-172]
gi|345113673|gb|AEN74505.1| Ribosomal RNA small subunit methyltransferase A [Rhodothermus
marinus SG0.5JP17-172]
Length = 260
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 118/221 (53%), Gaps = 17/221 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQH L +P + IV D ++EIGPGTG LT LLE + A+E+D R V
Sbjct: 9 KRLGQHFLVDPNIARKIVASLQAAPEDPVVEIGPGTGALTGLLLERYPHLTAIEIDPRAV 68
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC---------VANIPYQISSPLTFKLL 142
EL+ R+ L V Q DVL D + ++ V N+PY I+SP+ F LL
Sbjct: 69 AELKARWPE------LDVRQADVLTVD--WAELAEEKGGLLHVVGNLPYYITSPILFALL 120
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ A++M Q+E A RLVA PG K Y LSV QL A + L V ++ FRP P+V
Sbjct: 121 EARAVLAEAVLMMQREVAERLVAPPGSKTYGILSVAAQLWATPALLFPVSRHVFRPKPRV 180
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+S+VVR+ +P P V+P +R F ++ KTL + R
Sbjct: 181 ESAVVRLTFERPLPDVDPELLRQVIRTAFNQRRKTLRNSLR 221
>gi|313125978|ref|YP_004036248.1| dimethyladenosine transferase [Halogeometricum borinquense DSM
11551]
gi|448285818|ref|ZP_21477057.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halogeometricum borinquense DSM 11551]
gi|312292343|gb|ADQ66803.1| dimethyladenosine transferase [Halogeometricum borinquense DSM
11551]
gi|445575848|gb|ELY30311.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halogeometricum borinquense DSM 11551]
Length = 289
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 128/237 (54%), Gaps = 5/237 (2%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKS-TDVILEIGPGTGNLTKKLLEAGKMVIAV 84
G+ + QH L + +++ I + T +LE+G GTG LT +LL V V
Sbjct: 26 AGLRGDPDQDQHFLVDDRVLDRIPSYLPEDTDTSHVLEVGGGTGALTDRLLRVADRVTVV 85
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E D+R+ L+ F ++RL +++GD L+ DLP F CV+N+PY ISS +TF+LL
Sbjct: 86 ERDTRLAEFLREEFADAIEADRLTILEGDALEIDLPEFTACVSNLPYGISSEITFRLL-- 143
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
P ++MFQKEF R+ A+ G Y RLSV+ Q + V + V K F P P V+S
Sbjct: 144 -PRGVPLVLMFQKEFGERMAAETGTDEYGRLSVSAQHYGDVEVVETVPKEAFDPAPAVES 202
Query: 205 SVVRIEPRKPRPQVNPVEWD-GFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
VVR+ PR P +V+ + F++ F ++ KT+ + R +S LE ++A
Sbjct: 203 VVVRVTPRAPDYEVDDEAFFLDFVKALFTQRRKTIRNGIRNTAHISGLEDPEAVVEA 259
>gi|218780962|ref|YP_002432280.1| dimethyladenosine transferase [Desulfatibacillum alkenivorans
AK-01]
gi|218762346|gb|ACL04812.1| dimethyladenosine transferase [Desulfatibacillum alkenivorans
AK-01]
Length = 289
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 129/236 (54%), Gaps = 14/236 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K+KGQ+ L +P + V++A + D +LEIGPG G LT + K VIAVE D+ +
Sbjct: 26 KAKGQNFLADPATARACVERADLSPDDSVLEIGPGLGALTIPMSRKAKQVIAVEWDTNLA 85
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD-------ICVANIPYQISSPLTFKLLFH 144
L+ + +S SN + ++ D+LKTD+ + AN+PY ISS + +L+ +
Sbjct: 86 KVLENQIESLGLSN-ITILNQDILKTDIRGIAERAGGNMVVAANLPYNISSQVLIRLIQN 144
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+ F+ A +MFQ E A R++A+PG K Y R++V Q +R+ L +G +F P P+VDS
Sbjct: 145 RDLFKKAALMFQTELAQRIMAEPGGKDYGRITVLAQYSSRIRVLYSLGPAHFYPKPQVDS 204
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
V+ ++P P VN ++ F ++ KT LKN LS E + QA
Sbjct: 205 QVLEFLFKEPDPSVNEDILFAVVKAAFAKRRKT------LKNALSNSELPFSGEQA 254
>gi|336055350|ref|YP_004563637.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
kefiranofaciens ZW3]
gi|333958727|gb|AEG41535.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
kefiranofaciens ZW3]
Length = 294
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 130/224 (58%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IVQ A I+ D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDQAAILGIVQAADIQPNDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL + + P S R K++ DVLK + +FD+ VAN+PY I++P+
Sbjct: 86 EILQNELPPKIDNQPLSQRFKLLLKDVLKANFKEDLAGFFDLKKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL A PG+K Y L+++ Q +V+ L+V N+F
Sbjct: 146 IFALAESDLHFASLTLMMQKEVAERLEASPGNKEYGPLTISVQTEMKVNLALQVSHNSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P PKVDSSVV + P K +P + N + +++CF ++ KTL++
Sbjct: 206 PRPKVDSSVVVLTPLKDKPVIGNRQHFVWVVKMCFAQRRKTLNN 249
>gi|395495209|ref|ZP_10426788.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. PAMC 25886]
Length = 270
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 122/229 (53%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLKSGGQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F S P N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFASMPNFN---LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKALLSNAE 234
>gi|336255447|ref|YP_004598554.1| ribosomal RNA small subunit methyltransferase A [Halopiger
xanaduensis SH-6]
gi|335339436|gb|AEH38675.1| Ribosomal RNA small subunit methyltransferase A [Halopiger
xanaduensis SH-6]
Length = 279
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 20/248 (8%)
Query: 23 LGAGGISFHKSKGQHILKN-------PLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLL 75
+ G+ + QH L + P +E I A +LEIG GTG LT +LL
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLEEIDADASH-----LLEIGGGTGALTDRLL 62
Query: 76 EAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISS 135
V VE D ++ L+ F+ + L VI+ D L+ DLP F V+N+PY +SS
Sbjct: 63 AVADEVTVVERDRKLAAFLREEFREAIDAGDLTVIEDDALEVDLPDFTASVSNLPYGVSS 122
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
+ F+LL P R ++MFQ+EFA R+VA+P Y RLSV+TQ +A V + + K
Sbjct: 123 EIAFRLL---PEGRPLVLMFQQEFAERMVAEPDTSEYGRLSVSTQHYADVEIVESIPKEA 179
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFRLKNVLSMLE 252
F PPP V S+V+R PR P +V+ E+ FLR F ++ KT+ + R ++ LE
Sbjct: 180 FSPPPAVQSAVIRAVPRDPDYEVDDEEF--FLRFVKALFTQRRKTIRNAIRNTAHITNLE 237
Query: 253 KNYRTLQA 260
++A
Sbjct: 238 APDAVVEA 245
>gi|146309027|ref|YP_001189492.1| dimethyladenosine transferase [Pseudomonas mendocina ymp]
gi|145577228|gb|ABP86760.1| dimethyladenosine transferase [Pseudomonas mendocina ymp]
Length = 269
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K + +LEIGPG G +T+ LL +G + +ELD ++
Sbjct: 10 KRFGQNFLHDAGVIDRILRAIRAKDGERLLEIGPGQGAITEGLLGSGAQLDVIELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
LQ +F P R ++ QGD LK D + V N+PY IS+PL F LL +
Sbjct: 70 PILQGKFGDNP---RFRLNQGDALKFDFARLEAAPGSLRVVGNLPYNISTPLIFHLLDNA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 127 PLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHEVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 226
>gi|389680946|ref|ZP_10172292.1| dimethyladenosine transferase [Pseudomonas chlororaphis O6]
gi|388555235|gb|EIM18482.1| dimethyladenosine transferase [Pseudomonas chlororaphis O6]
Length = 272
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ KS D +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGVIDRILRSINAKSGDRMLEIGPGQGALTEGLLNSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAG---RDNFSLHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHRLLERIVREAFNQRRKTLRNT--LKALLSSAE 234
>gi|421505663|ref|ZP_15952598.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas mendocina DLHK]
gi|400343360|gb|EJO91735.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas mendocina DLHK]
Length = 269
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K + +LEIGPG G +T+ LL +G + +ELD ++
Sbjct: 10 KRFGQNFLHDAGVIDRILRAIRAKEGERLLEIGPGQGAITEGLLGSGAQLDVIELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
LQ +F P R ++ QGD LK D + V N+PY IS+PL F LL +
Sbjct: 70 PILQGKFGDNP---RFRLNQGDALKFDFARLEAAPGSLRVVGNLPYNISTPLIFHLLDNA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 127 PLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHEVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 226
>gi|443310298|ref|ZP_21039955.1| dimethyladenosine transferase [Synechocystis sp. PCC 7509]
gi|442779647|gb|ELR89883.1| dimethyladenosine transferase [Synechocystis sp. PCC 7509]
Length = 266
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 133/235 (56%), Gaps = 20/235 (8%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
QH LK+ ++ I++ A I +D ILEIGPGTG LT++LL + V+AVE+D + L
Sbjct: 9 AQHWLKSEKVLHQIIKAAEITKSDRILEIGPGTGVLTRQLLPLAQSVVAVEIDRDLCALL 68
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLL--FHQP 146
++ SN L ++QGD+L LP +D C VANIPY I+ P+ KLL P
Sbjct: 69 VKQLGKV--SNFL-LLQGDILSLALPDYDACKDLNKVVANIPYNITGPILEKLLGKISTP 125
Query: 147 ---AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
+F +++ QKE A RL A+PG++ + LSV Q A + V F PPPKVD
Sbjct: 126 PVQSFDSIVLLVQKEVAERLYAKPGNRAFGALSVRVQYLAECELVCPVPAQCFSPPPKVD 185
Query: 204 SSVVRIEPRKPRP-QVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRT 257
S+VVR+ PR+ P NP + +++ F K K L + N++S++E++ T
Sbjct: 186 SAVVRLRPRQILPAATNPRNLETLVKLGFATKRKMLRN-----NLISVVERDKFT 235
>gi|398866845|ref|ZP_10622319.1| dimethyladenosine transferase [Pseudomonas sp. GM78]
gi|398238858|gb|EJN24579.1| dimethyladenosine transferase [Pseudomonas sp. GM78]
Length = 272
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 14/225 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ D +LEIGPG G LT+ LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAGKSNFN---LHQGDALKFDFTSLNAAPGSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LHNAHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VDS++VR+ P P P + + +R F ++ KTL + +L
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|300711086|ref|YP_003736900.1| dimethyladenosine transferase [Halalkalicoccus jeotgali B3]
gi|448296817|ref|ZP_21486867.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halalkalicoccus jeotgali B3]
gi|299124769|gb|ADJ15108.1| dimethyladenosine transferase [Halalkalicoccus jeotgali B3]
gi|445580494|gb|ELY34872.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halalkalicoccus jeotgali B3]
Length = 277
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 131/261 (50%), Gaps = 10/261 (3%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKM 80
L G+ + QH L + +++ + A D+ +LEIG G G LT +L
Sbjct: 8 LARAGVRGDPNADQHFLIDDRVLDRLPTYATAIDADLSHVLEIGAGPGALTDRLCRVADR 67
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V AVE D +V L+R F L V++GD L LP F C++N+PY +SS + F+
Sbjct: 68 VTAVERDPDLVSFLRREFADEIADGTLSVVEGDALDVSLPEFTACLSNLPYGVSSQIAFR 127
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
L P R ++MFQ+EFA R+VA+P Y RLSV+ Q +A + V K F PPP
Sbjct: 128 LF---PRKRPLVLMFQREFAERMVAEPNTPEYGRLSVSAQHYADPEIVETVPKEAFSPPP 184
Query: 201 KVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQ 259
V+S++VR PR P V + + F++ F ++ KTL + R +S LE ++
Sbjct: 185 AVESALVRARPRDPEYTVSDEAFFLRFVKALFTQRRKTLRNAIRNTGHISGLEDPDAVVE 244
Query: 260 A----LQSSQNSSLGNTEIGT 276
A L + +L TE
Sbjct: 245 AADEDLMGRRAGTLAPTEFAA 265
>gi|448346239|ref|ZP_21535126.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema altunense JCM 12890]
gi|445632983|gb|ELY86186.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema altunense JCM 12890]
Length = 279
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 120/224 (53%), Gaps = 6/224 (2%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKM 80
+ G+ ++ QH L + +++ + D +LEIG GTG LT +LL G
Sbjct: 8 IARAGVRGDPNRDQHFLVDDRVLDRLPTYLDETDADTSHLLEIGGGTGALTDRLLAVGDE 67
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V VE D + L+ F + L VI+GD L+ DLP F V+N+PY +SS + F+
Sbjct: 68 VTVVERDRELAAFLREEFAEEIDAGELTVIEGDALEIDLPDFTASVSNLPYGVSSEIAFR 127
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
L P + ++MFQ+EFA R+VA PG Y RLSV++Q +A V + + K F PPP
Sbjct: 128 LF---PERQPLVLMFQQEFAERMVADPGTSEYGRLSVSSQHYADVELVESIPKEAFSPPP 184
Query: 201 KVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFR 243
V S+VVR PR P V N + F++ F ++ KT+ + R
Sbjct: 185 AVRSAVVRAVPRDPDYAVENEAFFLRFVKALFTQRRKTIRNAIR 228
>gi|398997172|ref|ZP_10700002.1| dimethyladenosine transferase [Pseudomonas sp. GM21]
gi|398124665|gb|EJM14171.1| dimethyladenosine transferase [Pseudomonas sp. GM21]
Length = 272
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 119/225 (52%), Gaps = 14/225 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ D +LEIGPG G LT+ LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSIHAKTEDRVLEIGPGQGALTQGLLNSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
+V L ++F + + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLVPILNQQFAG---KSNFSLHQGDALKFDFTSLNAAPGSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LHNASLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VDS++VR+ P P P + + +R F ++ KTL + +L
Sbjct: 184 VDSAIVRLVPHTVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKL 228
>gi|397772948|ref|YP_006540494.1| dimethyladenosine transferase [Natrinema sp. J7-2]
gi|397682041|gb|AFO56418.1| dimethyladenosine transferase [Natrinema sp. J7-2]
Length = 279
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 120/229 (52%), Gaps = 16/229 (6%)
Query: 23 LGAGGISFHKSKGQHILKN-------PLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLL 75
+ G+ + QH L + P +E I T +LEIG GTG LT +LL
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLEEI-----DADTSHLLEIGGGTGALTDRLL 62
Query: 76 EAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISS 135
G V VE D + L+ F + + L VI+GD L DLP F V+N+PY +SS
Sbjct: 63 AIGDEVTVVERDRELAAFLREEFAAEIDAGELTVIEGDALDVDLPDFTASVSNLPYGVSS 122
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
+ F+L P + ++MFQ+EFA R+VA+PG Y RLSV++Q +A + + + K
Sbjct: 123 EIAFRLF---PEKKPLVLMFQQEFAERMVAEPGTSEYGRLSVSSQHYADIDLVESIPKEA 179
Query: 196 FRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFR 243
F PPP V S+VVR PR P V N + F++ F ++ KT+ + R
Sbjct: 180 FSPPPAVQSAVVRAVPRDPDYAVENEAFFLRFVKALFTQRRKTIRNAIR 228
>gi|289676165|ref|ZP_06497055.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
FF5]
gi|440721016|ref|ZP_20901426.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34876]
gi|440727217|ref|ZP_20907456.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34881]
gi|443641949|ref|ZP_21125799.1| Dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B64]
gi|440364411|gb|ELQ01543.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34881]
gi|440364789|gb|ELQ01911.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP34876]
gi|443281966|gb|ELS40971.1| Dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B64]
Length = 268
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNGQFASKPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|424074235|ref|ZP_17811645.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407994740|gb|EKG35299.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 268
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNGQFASKPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|407717887|ref|YP_006795292.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Leuconostoc
carnosum JB16]
gi|407241643|gb|AFT81293.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Leuconostoc carnosum JB16]
Length = 295
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 15/236 (6%)
Query: 15 SGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKK 73
+ P + Q L G+ K GQ+ L + ++ IV A I + D +LEIGPG G+LT++
Sbjct: 8 ANPIRTQAILNEYGLHAKKKLGQNFLTDLNILHGIVDTAEITNDDFVLEIGPGIGSLTEQ 67
Query: 74 LLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC-------- 125
L A K V+A+E+DS+MV L Q PY N +KVI+ DVLK DL
Sbjct: 68 LARAAKKVVALEIDSQMVAVLSDTLQ--PYDN-VKVIENDVLKVDLNELIAAEFGQNATV 124
Query: 126 --VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
VAN+PY I++P+ +LL ++ ++M Q+E A RL A PG K Y L++ Q A
Sbjct: 125 KVVANLPYYITTPILMQLLRANISWDNIVVMMQREVADRLNAMPGTKEYGVLTLTLQYFA 184
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVN-PVEWDGFLRICFIRKNKTL 238
+ +KV +F P P VDS+VV++ P P V+ P G ++ F + K+L
Sbjct: 185 QAQLAMKVAAASFNPAPNVDSAVVKLTPLTPEIVVDQPERLFGVIKGSFSHRRKSL 240
>gi|422618520|ref|ZP_16687217.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. japonica str. M301072]
gi|330898897|gb|EGH30316.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. japonica str. M301072]
Length = 268
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNGQFASKPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|448340624|ref|ZP_21529595.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema gari JCM 14663]
gi|445630057|gb|ELY83327.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema gari JCM 14663]
Length = 279
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 119/229 (51%), Gaps = 16/229 (6%)
Query: 23 LGAGGISFHKSKGQHILKN-------PLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLL 75
+ G+ + QH L + P +E I T +LEIG GTG LT +LL
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLEEI-----DADTSHLLEIGGGTGALTDRLL 62
Query: 76 EAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISS 135
G V VE D + L F + + L VI+GD L DLP F V+N+PY +SS
Sbjct: 63 AIGDEVTVVERDRELAAFLHEEFAAEIDAGELTVIEGDALDVDLPDFTASVSNLPYGVSS 122
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
+ F+L P + ++MFQ+EFA R+VA+PG Y RLSV++Q +A + + + K
Sbjct: 123 EIAFRLF---PEKKPLVLMFQQEFAERMVAEPGTSEYGRLSVSSQHYADIDLVESIPKEA 179
Query: 196 FRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFR 243
F PPP V S+VVR PR P V N + F++ F ++ KT+ + R
Sbjct: 180 FSPPPAVQSAVVRAVPRDPDYAVENEAFFLRFVKALFTQRRKTIRNAIR 228
>gi|448592513|ref|ZP_21651620.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax elongans ATCC BAA-1513]
gi|445731518|gb|ELZ83102.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax elongans ATCC BAA-1513]
Length = 287
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 7/221 (3%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIA 83
G S + QH L + +V+ I ++TD+ +LEIG G G LT +LL+ V
Sbjct: 24 AGASGDPDRDQHFLVDDRVVDRIPTYLP-ENTDLSHVLEIGGGPGVLTDRLLDVADRVTV 82
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
VE D L+R F + RL V++GD L+ DLP F CV+N+PY ISS ++F+LL
Sbjct: 83 VEQDRTFADHLRREFAEEVEAGRLTVLEGDALEIDLPDFSACVSNLPYGISSEISFRLL- 141
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
P + ++MFQKEF R+ A+ G Y RLSV+ Q + V+ V + F P P V
Sbjct: 142 --PEGKPLVLMFQKEFGERMAAESGTSEYGRLSVSAQHYGDVNVCEIVPREAFDPQPAVQ 199
Query: 204 SSVVRIEPRKPRPQVNPVEWD-GFLRICFIRKNKTLSSIFR 243
S++VRIEP P +V+ E+ F++ F ++ KT+ + R
Sbjct: 200 SAIVRIEPHAPDYEVDDEEFFLDFVKALFTQRRKTIRNGIR 240
>gi|398924284|ref|ZP_10661101.1| dimethyladenosine transferase [Pseudomonas sp. GM48]
gi|398173615|gb|EJM61445.1| dimethyladenosine transferase [Pseudomonas sp. GM48]
Length = 272
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 14/225 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ D +LEIGPG G LT+ LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSIHAKTEDRLLEIGPGQGALTQGLLSSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAGKSNFN---LHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VDS++VR+ P P P + + +R F ++ KTL + +L
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|325276041|ref|ZP_08141856.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. TJI-51]
gi|324098826|gb|EGB96857.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. TJI-51]
Length = 267
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K + +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGIIDRILRAIHAKPGEHLLEIGPGQGALTEGLLGSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F + ++ QGD LK D + V N+PY IS+PL F LL H
Sbjct: 71 PILQHKFAD---RSNFRLHQGDALKFDFNRLGVPPRSLKVVGNLPYNISTPLIFHLLSHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + +R F ++ KTL + +
Sbjct: 188 IVRLVPHEVLPHPAKDAQLLERVVRDAFNQRRKTLRNTMK 227
>gi|148545687|ref|YP_001265789.1| dimethyladenosine transferase [Pseudomonas putida F1]
gi|148509745|gb|ABQ76605.1| dimethyladenosine transferase [Pseudomonas putida F1]
Length = 267
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 117/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K+ + +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
L +F + ++ QGD LK D + V N+PY IS+PL F LL H
Sbjct: 71 PILHHKFAD---RSNFRLHQGDALKFDFNQLGVPPRSLKVVGNLPYNISTPLIFHLLSHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 188 IVRLVPHEVLPFPAKDHLLLERVVREAFNQRRKTLRNTMK 227
>gi|426411834|ref|YP_007031933.1| dimethyladenosine transferase [Pseudomonas sp. UW4]
gi|426270051|gb|AFY22128.1| dimethyladenosine transferase [Pseudomonas sp. UW4]
Length = 272
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 14/225 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ D +LEIGPG G LT+ LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFADKSNFN---LHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VDS++VR+ P P P + + +R F ++ KTL + +L
Sbjct: 184 VDSAIVRLVPHAELPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|398937173|ref|ZP_10667212.1| dimethyladenosine transferase [Pseudomonas sp. GM41(2012)]
gi|398167156|gb|EJM55236.1| dimethyladenosine transferase [Pseudomonas sp. GM41(2012)]
Length = 272
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 14/225 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRAIRAKPEDRLLEIGPGQGALTQGLLNSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F S + + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAS---KSNFSLHQGDALKFDFTSLNAAPNSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LHNASLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VDS++VR+ P P P + + +R F ++ KTL + +L
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKL 228
>gi|15679326|ref|NP_276443.1| dimethyladenosine transferase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|27151554|sp|O27381.1|RSMA_METTH RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|2622432|gb|AAB85804.1| dimethyladenosine transferase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 273
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 119/217 (54%), Gaps = 9/217 (4%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ +S GQ+ L + + + I++ A ++ D +LEIGPG G LT + E V A+E
Sbjct: 16 GVRLRRSLGQNYLIDEVKRQRILEYADLREDDRVLEIGPGIGTLTLPMAELAGHVTAIES 75
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQP 146
D + L R Q + + VI GD L+ D P F+ V+N+PYQISSP+TF+LL H
Sbjct: 76 DPLIAAILMDRLQV----DNVDVIVGDALRVDFPEFNKVVSNLPYQISSPITFRLLEHD- 130
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F A++M+QKEFA R+VA+PG + Y RLSV A V + + F P P+V+S+V
Sbjct: 131 -FELAVLMYQKEFARRMVAEPGTREYSRLSVMVHFLAEVEIVDYLKPGCFFPRPRVESAV 189
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
V ++P R P + R F + K S R
Sbjct: 190 VTLKPTGFR---APAFLEDVCRALFQHRKKKTSKSLR 223
>gi|448385115|ref|ZP_21563694.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloterrigena thermotolerans DSM 11522]
gi|445657400|gb|ELZ10228.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloterrigena thermotolerans DSM 11522]
Length = 295
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 123/226 (54%), Gaps = 10/226 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQ--KAGIKSTDVILEIGPGTGNLTKKLLEAGKM 80
+ G+ + QH L + +++ + +A T +LEIG GTG LT +LL AG
Sbjct: 25 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLEAIDADTSQLLEIGGGTGALTDRLLAAGDE 84
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V VE D + L+ F + L VI+GD L+ DLP F V+N+PY +SS + F+
Sbjct: 85 VTVVERDRDLAEFLREEFADEIAAGELTVIEGDALEVDLPDFTASVSNLPYGVSSEIAFR 144
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
L P + ++MFQ+EFA R+VA+PG Y RLSV++Q +A V + + K F P P
Sbjct: 145 LF---PEKKPLVLMFQQEFAERMVAEPGTSEYGRLSVSSQHYADVELVESIPKEAFDPQP 201
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
V S+VVR PR+P V + D FLR F ++ KT+ + R
Sbjct: 202 AVQSAVVRAVPREPDYTV--ADEDFFLRFVKAVFTQRRKTVRNAIR 245
>gi|365840331|ref|ZP_09381524.1| dimethyladenosine transferase [Anaeroglobus geminatus F0357]
gi|364561692|gb|EHM39581.1| dimethyladenosine transferase [Anaeroglobus geminatus F0357]
Length = 290
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 122/221 (55%), Gaps = 14/221 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L P +V I AG+++ D +LEIGP G LT+ L E G + AVE+D R++
Sbjct: 30 KKWGQNFLIRPQVVRDIAAAAGVRNGDPVLEIGPRYGTLTQALAETGADITAVEIDGRLL 89
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSPLTFKLLFHQ 145
L + + Y N +++I GD++KTD+ F +C AN+PY I++P+ +LL +
Sbjct: 90 PILAKTLEK--YDN-VRIIHGDIMKTDIAAEMKYEPFTVC-ANLPYYITTPVIMRLLEEK 145
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
+ R ++M QKE A R+ A+PG K+Y LSV Q ++ F PPP V S+
Sbjct: 146 LSIRRMVVMVQKEVAERMTAKPGSKIYGALSVAVQYRTEPHIEFEIAPKAFLPPPAVTSA 205
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFR 243
VV + R P P V E F RI F ++ KTL++ +
Sbjct: 206 VVAMNVR-PEPAVKVKEEKRFFRIVAFSFAQRRKTLANALK 245
>gi|398901159|ref|ZP_10650110.1| dimethyladenosine transferase [Pseudomonas sp. GM50]
gi|398180278|gb|EJM67864.1| dimethyladenosine transferase [Pseudomonas sp. GM50]
Length = 272
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LTK LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTKGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAG---KSNFHLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLHNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKL 228
>gi|448337101|ref|ZP_21526183.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema pallidum DSM 3751]
gi|445626447|gb|ELY79790.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema pallidum DSM 3751]
Length = 279
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 119/224 (53%), Gaps = 6/224 (2%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKM 80
+ G+ + QH L + +++ + D +LEIG GTG LT +LL G
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLDETDADTSHLLEIGGGTGALTDRLLAIGDE 67
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V VE D + L+ F + L VI+GD L+ DLP F V+N+PY +SS + F+
Sbjct: 68 VTVVERDRDLAAFLREEFAGEIDAGELTVIEGDALEVDLPDFTASVSNLPYGVSSEIAFR 127
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
L P + ++MFQ+EFA R+VA PG Y RLSV++Q +A V + + K F PPP
Sbjct: 128 LF---PEKQPLVMMFQQEFAERMVADPGTSEYGRLSVSSQHYADVELVESIPKEAFSPPP 184
Query: 201 KVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFR 243
V S+VVR PR P V N + F++ F ++ KT+ + R
Sbjct: 185 AVQSAVVRAVPRDPDYAVENEAFFLRFVKALFTQRRKTIRNAIR 228
>gi|347727154|gb|AEP19935.1| dimethyladenosine transferase [Bacillus aquimaris]
Length = 293
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 137/260 (52%), Gaps = 26/260 (10%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
LG G SF KS GQ+ L +P ++ +I + AG+ +EIGPG G LT+ L V+
Sbjct: 15 LGKYGFSFKKSLGQNFLIDPNILRNITEHAGLTKETAAIEIGPGIGALTEHLARTSGKVV 74
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP---------YFDI-CVANIPYQ 132
A E+D R++ L +PY N +K+I D+L+ D+ Y DI VAN+PY
Sbjct: 75 AFEIDQRLIPILDDTL--SPYDN-VKIINEDILEADVEEIINKELAGYEDIMVVANLPYY 131
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
+++P+ KLL + R +M QKE R+ A+PG K Y LS+ Q + ++ V
Sbjct: 132 VTTPIILKLLMERLPIRGICVMLQKEVGDRISAKPGKKEYGSLSIAIQYYTEAEMVMTVP 191
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL---RICFIRKNKTLSSIFRLKNVLS 249
K F P P VDS+V+R+ R+ +P V+ + D F R F ++ KT+ L N+ S
Sbjct: 192 KTVFMPQPNVDSAVIRLTKRE-KPPVDVINEDFFFTVTRSSFAQRRKTI-----LNNLTS 245
Query: 250 ML----EKNYRTLQALQSSQ 265
L EK ++AL ++
Sbjct: 246 QLPQGKEKKELIIEALSKAE 265
>gi|422650761|ref|ZP_16713562.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330963845|gb|EGH64105.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 268
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNSQFASKPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLEQVVREAFNQRRKTLRNTLKL 228
>gi|448414166|ref|ZP_21577305.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halosarcina pallida JCM 14848]
gi|445682459|gb|ELZ34876.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halosarcina pallida JCM 14848]
Length = 289
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 122/220 (55%), Gaps = 5/220 (2%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKS-TDVILEIGPGTGNLTKKLLEAGKMVIAV 84
G+ ++ QH L + ++ I + + T +LE+G GTG LT +LL V V
Sbjct: 26 AGLRGDPNQDQHFLVDDRVLARIPEYLPEDADTSHVLEVGGGTGALTDRLLRIADRVTVV 85
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E DSR+ L+ F + + RL V++GD L+ DLP F CV+N+PY ISS +TF+LL
Sbjct: 86 ERDSRLAAFLREEFAAEVENGRLTVLEGDALELDLPEFTACVSNLPYGISSEITFRLL-- 143
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
P ++MFQKEF R+ A+ G Y RLSV+ Q + V + V K F P P V+S
Sbjct: 144 -PRGVPLVLMFQKEFGERMAAESGTSEYGRLSVSAQHYGDVEVVETVPKGAFSPAPAVES 202
Query: 205 SVVRIEPRKPRPQVNPVEWD-GFLRICFIRKNKTLSSIFR 243
VVR+ PR P +V+ + F++ F ++ KT+ + R
Sbjct: 203 VVVRVTPRDPDYEVDDESFFLDFVKALFTQRRKTIRNGIR 242
>gi|28867779|ref|NP_790398.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|422659008|ref|ZP_16721438.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M302278]
gi|33516927|sp|Q88A46.1|RSMA_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|28851014|gb|AAO54093.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|331017631|gb|EGH97687.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M302278]
Length = 268
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNSQFASQPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKL 228
>gi|398959140|ref|ZP_10677956.1| dimethyladenosine transferase [Pseudomonas sp. GM33]
gi|398145515|gb|EJM34296.1| dimethyladenosine transferase [Pseudomonas sp. GM33]
Length = 272
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 14/225 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ D +LEIGPG G LT+ LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAGKSNFN---LHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VDS++VR+ P P P + + +R F ++ KTL + +L
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|410093045|ref|ZP_11289545.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas viridiflava UASWS0038]
gi|409759578|gb|EKN44789.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas viridiflava UASWS0038]
Length = 268
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 116/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAHLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNSQFAGKPNFN---LHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHETLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|424942983|ref|ZP_18358746.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
NCMG1179]
gi|346059429|dbj|GAA19312.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
NCMG1179]
Length = 268
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 119/227 (52%), Gaps = 13/227 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDVIELDQDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLFHQ 145
L+ +F +R + QGD LK DL V N+PY IS+PL F LL H
Sbjct: 71 PLLKLKFG---LESRFSLHQGDALKFDLASLVESGEKLRVVGNLPYNISTPLIFHLLEHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 PVIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGSGAFNPPPKVDSA 187
Query: 206 VVRIEP--RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
+VR+ P P P +P + +R F ++ KTL + LK +LS+
Sbjct: 188 IVRLTPFTEPPHPARDPKLLERVVREAFNQRRKTLRNT--LKPLLSV 232
>gi|229592954|ref|YP_002875073.1| dimethyladenosine transferase [Pseudomonas fluorescens SBW25]
gi|229364820|emb|CAY52848.1| dimethyladenosine transferase [Pseudomonas fluorescens SBW25]
Length = 270
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F P N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAGMPNFN---LHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKALLSQAE 234
>gi|302130722|ref|ZP_07256712.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 268
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNSQFASQPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKL 228
>gi|451979631|ref|ZP_21928046.1| Ribosomal RNA small subunit methyltransferase A [Nitrospina
gracilis 3/211]
gi|451763159|emb|CCQ89243.1| Ribosomal RNA small subunit methyltransferase A [Nitrospina
gracilis 3/211]
Length = 262
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 129/244 (52%), Gaps = 25/244 (10%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
+S GQ+ L +P + E IV A I+ ++EIGPG G LT LLE +IA+E+D ++
Sbjct: 5 RSLGQNFLTDPAIAEEIVAHAQIEDGGTVIEIGPGPGILTGLLLERCGKLIALEIDPKLC 64
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPY----FDICVANIPYQISSPLTFKLLFHQPA 147
L +RF+S P + + Q D L D F + V+N+PY + P+ +L+ +
Sbjct: 65 HLLNKRFKSNP---KFDLHQRDALVYDYSQAGGRFQV-VSNLPYYAAMPILKRLIHYGSH 120
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
+M Q+E RLVAQPG + Y L+V TQ H V +++VGK NF PPPKVDSSV+
Sbjct: 121 IANMTLMLQREVVDRLVAQPGSRDYGSLTVFTQFHCEVERIMEVGKKNFDPPPKVDSSVI 180
Query: 208 RIEPRKPRPQVNPVEWDGF------LRICFIRKNKTLSSIFRLKNVLSMLEKNYR-TLQA 260
R+ PR PVE D + F K K LKN L L K++ T Q
Sbjct: 181 RLVPR----SAPPVEVDNLKTFFHVVHAAFFHKRKM------LKNNLKSLAKHFDFTWQG 230
Query: 261 LQSS 264
++ +
Sbjct: 231 IEDA 234
>gi|383315712|ref|YP_005376554.1| dimethyladenosine transferase [Frateuria aurantia DSM 6220]
gi|379042816|gb|AFC84872.1| dimethyladenosine transferase [Frateuria aurantia DSM 6220]
Length = 258
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 116/222 (52%), Gaps = 13/222 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQH L + V+ IV + D ++EIGPG G +T LL+A + A+ELD+ ++
Sbjct: 7 KHFGQHFLHDRHYVDRIVGAIAPRPADTVVEIGPGEGAMTFPLLKAAGRLTAIELDAELI 66
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--------CVANIPYQISSPLTFKLLF 143
L+ R S +L+VI+ D+LK D+ N+PY ISSP+ F +
Sbjct: 67 PGLEARAASI---GQLQVIRSDILKVDISRLATELGAERLRIAGNLPYYISSPILFHCVD 123
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H A M QKE R+ A PG K+Y RLSV QL +V+ L V FRPPPKVD
Sbjct: 124 HAAAIEDMHFMLQKEVVDRMAAAPGSKIYGRLSVMLQLRCQVTPLFIVPPGAFRPPPKVD 183
Query: 204 SSVVRIEPRKPR--PQVNPVEWDGFLRICFIRKNKTLSSIFR 243
S+VVR++P P P + ++ F ++ KTL + +
Sbjct: 184 SAVVRMQPLPPEQLPDADSRRLHDIVKAAFAQRRKTLGNTLK 225
>gi|374703444|ref|ZP_09710314.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. S9]
Length = 273
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHAKEAEHLLEIGPGQGALTEGLLNSGAQLDVIELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F S P R ++ QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILQAKFGSQP---RFRLNQGDALKFDFQRLEAQPRSLRVVGNLPYNISTPLIFHLLDNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK DS+
Sbjct: 128 SLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKFDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + +R F ++ KTL + +
Sbjct: 188 IVRLVPHEVLPHPAKDHKLLERVVREAFNQRRKTLRNTLK 227
>gi|297618729|ref|YP_003706834.1| dimethyladenosine transferase [Methanococcus voltae A3]
gi|297377706|gb|ADI35861.1| dimethyladenosine transferase [Methanococcus voltae A3]
Length = 275
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 114/210 (54%), Gaps = 6/210 (2%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ LK+ V+ + +A + + D++LEIG G G LTK+L + K V +ELD R+
Sbjct: 14 KKLGQCFLKDKNFVKKAINRANLNNDDIVLEIGLGEGVLTKELAKVAKKVYVIELDKRLE 73
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--CVANIPYQISSPLTFKLLFHQPAFR 149
+ + P + +I D LK DL D VAN+PYQISSP+TFK L + F
Sbjct: 74 IFANEVIKEYP---NVSIIWEDALKVDLDSLDFNKIVANLPYQISSPITFKFLERKKGFD 130
Query: 150 CAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRI 209
AI+M+Q EFA R+ + K Y RLSV Q A V + KV F P PKVDS++V +
Sbjct: 131 LAILMYQYEFAKRMAGKEDTKEYGRLSVAVQYSADVKMICKVPPTAFSPKPKVDSAIVSL 190
Query: 210 EPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
+ P V + + L+ F +NKT+
Sbjct: 191 VKKNPEYDVLDEKMFKNLLKALFQHRNKTV 220
>gi|66047854|ref|YP_237695.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B728a]
gi|75500351|sp|Q4ZMG5.1|RSMA_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|63258561|gb|AAY39657.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
B728a]
Length = 268
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ + D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRARPEDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNGQFASKPNFN---LHQGDALKFDFNTLGADPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|424068226|ref|ZP_17805682.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|407998608|gb|EKG39012.1| dimethyladenosine transferase [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
Length = 268
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL
Sbjct: 71 PILNGQFASKPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQSA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|395796297|ref|ZP_10475595.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Ag1]
gi|421139613|ref|ZP_15599647.1| dimethyladenosine transferase [Pseudomonas fluorescens BBc6R8]
gi|395339599|gb|EJF71442.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Ag1]
gi|404509185|gb|EKA23121.1| dimethyladenosine transferase [Pseudomonas fluorescens BBc6R8]
Length = 270
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 121/229 (52%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLKSGGQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F P N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAGMPNFN---LHQGDALKFDFTSLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKALLSNAE 234
>gi|398873142|ref|ZP_10628407.1| dimethyladenosine transferase [Pseudomonas sp. GM74]
gi|398200427|gb|EJM87339.1| dimethyladenosine transferase [Pseudomonas sp. GM74]
Length = 269
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 14/225 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ D +LEIGPG G LT+ LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFSGKSNFN---LHQGDALKFDFNSLNAVPGSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VDS++VR+ P P P + + +R F ++ KTL + +L
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|398908996|ref|ZP_10654330.1| dimethyladenosine transferase [Pseudomonas sp. GM49]
gi|398188935|gb|EJM76223.1| dimethyladenosine transferase [Pseudomonas sp. GM49]
Length = 272
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 14/225 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ D +LEIGPG G LT+ LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAGKSNFN---LHQGDALKFDFNSLNATPGSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VDS++VR+ P P P + + +R F ++ KTL + +L
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|422673107|ref|ZP_16732468.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aceris str. M302273]
gi|330970842|gb|EGH70908.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aceris str. M302273]
Length = 268
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ + D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRARPEDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNGQFASKPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|386019301|ref|YP_005937325.1| dimethyladenosine transferase [Pseudomonas stutzeri DSM 4166]
gi|327479273|gb|AEA82583.1| dimethyladenosine transferase [Pseudomonas stutzeri DSM 4166]
Length = 264
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K + ++EIGPG G LT+ LL++G + VELD ++
Sbjct: 10 KRFGQNFLHDAGVIHRILRAIHAKPGERLVEIGPGQGALTEGLLDSGAHLDVVELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
LQ RF + + QGD LK D P V N+PY IS+PL F LL H
Sbjct: 70 PILQSRFAE---RSNFALHQGDALKFDFAQLSREPASLRIVGNLPYNISTPLIFHLLEHA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL AQPG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 127 GLIRDMHFMLQKEVVERLAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLK 226
>gi|398856717|ref|ZP_10612435.1| dimethyladenosine transferase [Pseudomonas sp. GM79]
gi|398242689|gb|EJN28296.1| dimethyladenosine transferase [Pseudomonas sp. GM79]
Length = 272
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F S + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAS---KSNFHLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLHNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKL 228
>gi|152987663|ref|YP_001346131.1| dimethyladenosine transferase [Pseudomonas aeruginosa PA7]
gi|150962821|gb|ABR84846.1| dimethyladenosine transferase [Pseudomonas aeruginosa PA7]
Length = 268
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDVIELDQDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLFHQ 145
L+ +F P R + QGD LK D V N+PY IS+PL F LL H
Sbjct: 71 PLLKLKFGLEP---RFSLHQGDALKFDFASLVESDEKLRVVGNLPYNISTPLIFHLLEHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 PVIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEP--RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
+VR+ P P P +P + +R F ++ KTL + LK +LS+
Sbjct: 188 IVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNT--LKPLLSV 232
>gi|398890189|ref|ZP_10643876.1| dimethyladenosine transferase [Pseudomonas sp. GM55]
gi|398188492|gb|EJM75794.1| dimethyladenosine transferase [Pseudomonas sp. GM55]
Length = 272
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 14/225 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ D +LEIGPG G LT+ LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSIHAKAEDRLLEIGPGQGALTQGLLSSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAGKSNFN---LHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LHNSHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VDS++VR+ P P P + + +R F ++ KTL + +L
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|420137187|ref|ZP_14645182.1| dimethyladenosine transferase [Pseudomonas aeruginosa CIG1]
gi|421157632|ref|ZP_15616989.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 25324]
gi|403250028|gb|EJY63489.1| dimethyladenosine transferase [Pseudomonas aeruginosa CIG1]
gi|404550439|gb|EKA59188.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 25324]
Length = 268
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 119/227 (52%), Gaps = 13/227 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDVIELDQDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLFHQ 145
L+ +F +R + QGD LK DL V N+PY IS+PL F LL H
Sbjct: 71 PLLKLKFG---LESRFSLHQGDALKFDLASLVESGEKLRVVGNLPYNISTPLIFHLLEHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 PVIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEP--RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
+VR+ P P P +P + +R F ++ KTL + LK +LS+
Sbjct: 188 IVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNT--LKPLLSV 232
>gi|402700967|ref|ZP_10848946.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fragi A22]
Length = 272
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 125/233 (53%), Gaps = 16/233 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K TD +LEIGPG G LTK +L +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRAINAKPTDRLLEIGPGQGALTKGILNSGGQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKL 141
++ L+++F + + QGD LK D P V N+PY IS+PL F L
Sbjct: 67 KDLIPILKQQFAGM---SNFTLHQGDALKFDFNSLGAAPRTLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LKNAGLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS++VR+ P + P P + + +R F ++ KTL + LK +LS E
Sbjct: 184 VDSAIVRLVPHEVLPHPAKDHRLLERVVREAFNQRRKTLRNT--LKALLSNAE 234
>gi|298160150|gb|EFI01179.1| Dimethyladenosine transferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 268
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F + P N + QGD LK D P+ V N+PY IS+PL F LL +
Sbjct: 71 PILTGQFGNKPNFN---LHQGDALKFDFNSLGAEPHSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|399007391|ref|ZP_10709901.1| dimethyladenosine transferase [Pseudomonas sp. GM17]
gi|425901934|ref|ZP_18878525.1| dimethyladenosine transferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892756|gb|EJL09233.1| dimethyladenosine transferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|398120363|gb|EJM10027.1| dimethyladenosine transferase [Pseudomonas sp. GM17]
Length = 272
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ KS D +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGVIDRILRSINAKSGDRMLEIGPGQGALTEGLLNSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAG---RDNFSLHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +L+ E
Sbjct: 188 IVRLVPHAVLPHPAKDHRLLERIVREAFNQRRKTLRNT--LKALLTSAE 234
>gi|374635706|ref|ZP_09707299.1| dimethyladenosine transferase [Methanotorris formicicus Mc-S-70]
gi|373561322|gb|EHP87559.1| dimethyladenosine transferase [Methanotorris formicicus Mc-S-70]
Length = 274
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 124/217 (57%), Gaps = 22/217 (10%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ L + V+ V++A I D++LEIG G G LT++L + K V +E+D +
Sbjct: 15 KKLGQCFLIDKNFVKKAVEEAEINKEDIVLEIGLGKGILTEELAKNAKKVYVIEIDEGL- 73
Query: 92 LELQRRFQSTPYSNRLK-------VIQGDVLKTDLPY--FDICVANIPYQISSPLTFKLL 142
PY+ ++K +I D LK DL F+ VAN+PYQISSP+TFKLL
Sbjct: 74 ---------KPYAEKIKEKYDNVEIIWEDALKIDLNNLGFNKVVANLPYQISSPITFKLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA R+VA+ G K Y RLSV Q A V + KV + F P PKV
Sbjct: 125 --KTNFDIAVLMYQYEFAKRMVAKEGTKDYSRLSVAVQYKADVEFICKVPPSAFSPRPKV 182
Query: 203 DSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTL 238
+S++V+I R+P +V E ++ LR F KNKT+
Sbjct: 183 NSAIVKIVKREPLFKVENEEFFENVLRALFQHKNKTV 219
>gi|452748435|ref|ZP_21948214.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri NF13]
gi|452007609|gb|EMD99862.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri NF13]
Length = 264
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ KS + ++EIGPG G LT+ LL++G + VELD ++
Sbjct: 10 KRFGQNFLHDAGVIHRILRAIHAKSGERLVEIGPGQGALTEGLLDSGAHLDVVELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F + + QGD LK D V N+PY IS+PL F LL H
Sbjct: 70 PILQGKFAG---RDNFNLHQGDALKFDFSRLSAEPNSLRIVGNLPYNISTPLIFHLLDHA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL AQPG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 127 HLIRDMHFMLQKEVVERLAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLK 226
>gi|302185943|ref|ZP_07262616.1| dimethyladenosine transferase [Pseudomonas syringae pv. syringae
642]
Length = 268
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNSQFAGKPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|352090529|ref|ZP_08954578.1| dimethyladenosine transferase [Rhodanobacter sp. 2APBS1]
gi|389797149|ref|ZP_10200192.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter sp. 116-2]
gi|351676902|gb|EHA60054.1| dimethyladenosine transferase [Rhodanobacter sp. 2APBS1]
gi|388447523|gb|EIM03523.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter sp. 116-2]
Length = 262
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 118/224 (52%), Gaps = 17/224 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KS GQH L + ++ IV ++ D ++EIGPG G LT LL + A+ELD+ ++
Sbjct: 7 KSFGQHFLHDRRYIDRIVSAIAPRAEDFVVEIGPGEGALTLPLLAVAGRLTAIELDTDLI 66
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTD---------LPYFDICVANIPYQISSPLTFKLL 142
LQ R +T L +I DVLK D +P I N+PY ISSP+ F +
Sbjct: 67 PGLQARAATT---GELHIIHADVLKVDFSALAHSHGVPRLRIA-GNLPYYISSPILFHCV 122
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H A M QKE R+ A+PG K+Y RLSV QL RV L V FRPPPKV
Sbjct: 123 EHAAAIADMHFMLQKEVVERMAAEPGSKVYGRLSVMLQLACRVEPLFDVPPEAFRPPPKV 182
Query: 203 DSSVVRIEPRKPRPQVN---PVEWDGFLRICFIRKNKTLSSIFR 243
+S+VVR+ P P +++ P ++ F ++ KTL++ R
Sbjct: 183 ESAVVRLLP-LPAHELHDAPPEHLHAVVKAAFGQRRKTLANALR 225
>gi|159906054|ref|YP_001549716.1| dimethyladenosine transferase [Methanococcus maripaludis C6]
gi|226732596|sp|A9AAW1.1|RSMA_METM6 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|159887547|gb|ABX02484.1| dimethyladenosine transferase [Methanococcus maripaludis C6]
Length = 263
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 14/213 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K GQ LK+ V+ + +A I D++LE+G G G LTK+L + K V +ELD R+
Sbjct: 5 KKLGQCFLKDKNFVKKAINRAEITDKDIVLEVGLGEGALTKELAKLAKKVYVIELDERLK 64
Query: 91 --VLELQRRFQSTPYSNRLKVIQGDVLKTDLPY--FDICVANIPYQISSPLTFKLLFHQP 146
E+ F++ +++I D LK DL F+ VAN+PYQISSP+TFK L +
Sbjct: 65 PFADEITSEFEN------VEIIWSDALKVDLKNLGFNKIVANLPYQISSPITFKFL--EE 116
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F A++M+Q EFA R+ +P K Y RLSV Q +A V + KV + F P P V+S++
Sbjct: 117 DFETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNSAI 176
Query: 207 VRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTL 238
V++ RKP+ V + + L+ F +N+T+
Sbjct: 177 VKLTKRKPKYSVKDEKFFKKVLKALFQHRNRTI 209
>gi|398983244|ref|ZP_10689916.1| dimethyladenosine transferase [Pseudomonas sp. GM24]
gi|399011946|ref|ZP_10714275.1| dimethyladenosine transferase [Pseudomonas sp. GM16]
gi|398116956|gb|EJM06712.1| dimethyladenosine transferase [Pseudomonas sp. GM16]
gi|398157430|gb|EJM45819.1| dimethyladenosine transferase [Pseudomonas sp. GM24]
Length = 272
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 122/233 (52%), Gaps = 16/233 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ KS D +LEIGPG G LT LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSISAKSEDRLLEIGPGQGALTAGLLSSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F + + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAG---KSNFNLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS++VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKQLLSNAE 234
>gi|452207471|ref|YP_007487593.1| probable dimethyladenosine transferase [Natronomonas moolapensis
8.8.11]
gi|452083571|emb|CCQ36883.1| probable dimethyladenosine transferase [Natronomonas moolapensis
8.8.11]
Length = 273
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 109/205 (53%), Gaps = 4/205 (1%)
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
T ++EIG GTG LT +LL V VE D + L+ F + L V+ GD L+
Sbjct: 43 TSHVVEIGGGTGGLTDRLLSVADRVTVVERDPDLAAFLREEFAAEIAGGTLTVVAGDALE 102
Query: 117 TDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS 176
DLP F V+N+PY +SS + F+LL PA R ++MFQ EFA R+ A PG Y RLS
Sbjct: 103 VDLPAFTASVSNLPYGVSSEIAFRLL---PAGRPLVLMFQAEFAERMAAAPGSSEYGRLS 159
Query: 177 VNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKN 235
V +A + + V K F PPP V+SSVVR PR P V E + +R F ++
Sbjct: 160 VTAGHYADIEVVEAVPKEAFSPPPAVESSVVRATPRVPEYDVPDDESFMALVRAVFTQRR 219
Query: 236 KTLSSIFRLKNVLSMLEKNYRTLQA 260
KT+ + R +S ++ ++A
Sbjct: 220 KTMRNAIRNTTHISGIDDPEALIEA 244
>gi|213967675|ref|ZP_03395822.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato T1]
gi|301382735|ref|ZP_07231153.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato
Max13]
gi|302063470|ref|ZP_07255011.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato K40]
gi|213927451|gb|EEB60999.1| dimethyladenosine transferase [Pseudomonas syringae pv. tomato T1]
Length = 268
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVLDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNSQFASQPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKL 228
>gi|440744084|ref|ZP_20923390.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP39023]
gi|440374540|gb|ELQ11268.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae BRIP39023]
Length = 268
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F + P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNGQFANKPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|381396436|ref|ZP_09921911.1| Methyltransferase type 11, partial [Microbacterium laevaniformans
OR221]
gi|380776240|gb|EIC09469.1| Methyltransferase type 11, partial [Microbacterium laevaniformans
OR221]
Length = 140
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F+ + GQHILKNP + E+IV KA +K +DV+LE+GPGTGNLT ++LE K VIAVELD R
Sbjct: 11 FNTNFGQHILKNPGVAEAIVAKADLKPSDVVLEVGPGTGNLTVRILEKAKKVIAVELDPR 70
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQI-SSPL 137
M E+ +R Q TP RL+V+ GDV+KT+LP FD+C++N PYQ+ +PL
Sbjct: 71 MAAEVTKRVQGTPMQKRLEVMLGDVIKTELPPFDVCISNTPYQVRRAPL 119
>gi|292656864|ref|YP_003536761.1| dimethyladenosine transferase [Haloferax volcanii DS2]
gi|433430738|ref|ZP_20407537.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax sp. BAB2207]
gi|448290865|ref|ZP_21482010.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax volcanii DS2]
gi|448568254|ref|ZP_21637831.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax lucentense DSM 14919]
gi|448600805|ref|ZP_21656184.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax alexandrinus JCM 10717]
gi|291372487|gb|ADE04714.1| dimethyladenosine transferase [Haloferax volcanii DS2]
gi|432194364|gb|ELK50996.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax sp. BAB2207]
gi|445577918|gb|ELY32338.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax volcanii DS2]
gi|445727204|gb|ELZ78818.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax lucentense DSM 14919]
gi|445734818|gb|ELZ86374.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax alexandrinus JCM 10717]
Length = 287
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 111/202 (54%), Gaps = 4/202 (1%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIG G G LT +LL V VE D L+R F S+RL V++GD L DL
Sbjct: 59 VLEIGGGPGVLTDRLLGVADRVTVVEQDRTFAAHLRREFADEVESDRLTVVEGDALDVDL 118
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P F CV+N+PY ISS ++F+LL P + ++MFQKEF R+ A+ G Y RLSV+T
Sbjct: 119 PEFTACVSNLPYGISSEISFRLL---PRGKPLVLMFQKEFGERMAAEAGTSEYGRLSVST 175
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
Q + V V + F P P V S VVRI PR+P +V + + F++ F ++ KT+
Sbjct: 176 QHYGEVELCEHVPREAFDPKPAVQSVVVRITPREPEYEVDDEAFFLDFVKALFTQRRKTI 235
Query: 239 SSIFRLKNVLSMLEKNYRTLQA 260
+ R +S L ++A
Sbjct: 236 RNGIRNTAHISGLSDPEAVVEA 257
>gi|408479337|ref|ZP_11185556.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. R81]
Length = 270
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F P N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFADKPNFN---LHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKALLSNAE 234
>gi|422296567|ref|ZP_16384234.1| dimethyladenosine transferase [Pseudomonas avellanae BPIC 631]
gi|407992251|gb|EKG33924.1| dimethyladenosine transferase [Pseudomonas avellanae BPIC 631]
Length = 268
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLGSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNSQFASKPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKL 228
>gi|388467103|ref|ZP_10141313.1| dimethyladenosine transferase [Pseudomonas synxantha BG33R]
gi|388010683|gb|EIK71870.1| dimethyladenosine transferase [Pseudomonas synxantha BG33R]
Length = 270
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 120/229 (52%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F P N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAGKPNFN---LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKALLSNAE 234
>gi|114328859|ref|YP_746016.1| dimethyladenosine transferase [Granulibacter bethesdensis CGDNIH1]
gi|114317033|gb|ABI63093.1| dimethyladenosine transferase [Granulibacter bethesdensis CGDNIH1]
Length = 286
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 129/263 (49%), Gaps = 16/263 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLE-AGKMVIAVE 85
G+ K+ GQH L +P L+ IV++AG +EIGPG G LT+ LLE A + V+A+E
Sbjct: 27 GLEARKALGQHFLLDPHLMARIVREAGPMQGRTAIEIGPGPGGLTRALLETAAERVVAIE 86
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI----CVANIPYQISSPLTFKL 141
LD R + L+ + Y +RL V++ D ++ DL VAN+PY + +PL
Sbjct: 87 LDHRAIPALEE--LAGFYPDRLTVLEADAMRADLGTLTTGPRRIVANLPYNVGTPLLVGW 144
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L F +MFQ+E A R+ A PG Y RL V Q RV L+ V F PPPK
Sbjct: 145 LRQAALFESMTLMFQQEVAERICAAPGSDAYGRLGVLAQWTCRVEMLMSVPPGAFHPPPK 204
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFRLKNVLSMLEK----N 254
V S+V + PR+ +P +P + R+ F ++ K L + +L +
Sbjct: 205 VYSAVAALWPREEQP--SPALFTAMERVTAAAFGQRRKMLRGALKSLGGEGLLSRAGIAG 262
Query: 255 YRTLQALQSSQNSSLGNTEIGTD 277
R + L + L T +G D
Sbjct: 263 DRRAETLTIEEFDRLARTSLGGD 285
>gi|427419540|ref|ZP_18909723.1| dimethyladenosine transferase [Leptolyngbya sp. PCC 7375]
gi|425762253|gb|EKV03106.1| dimethyladenosine transferase [Leptolyngbya sp. PCC 7375]
Length = 278
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 134/243 (55%), Gaps = 24/243 (9%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K GQH L++P ++ I+ A + TD +LEIGPG G LTK L+ + V+AVE+D +
Sbjct: 5 RKRFGQHWLRDPQILNQILAAAELSDTDRVLEIGPGQGVLTKGLVPFTQAVVAVEVDRDL 64
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFK 140
V +LQ++FQ+ S R +I+GD L DL P F + VANIPY I+ P+ K
Sbjct: 65 VRQLQQQFQA---SERFHLIEGDFLDVDLAAALADHPNFQSPNKVVANIPYYITGPILEK 121
Query: 141 LL--FHQP---AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL QP + +++ QKE A RL A+PG K + LSV Q A + V
Sbjct: 122 LLGQIRQPNPQPYDSIVLLVQKEVADRLYAEPGTKAFNGLSVRIQYLAECELICPVPAKA 181
Query: 196 FRPPPKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN 254
F+P PKVDS+VVR+ PR P NP D ++ F +K K L + N+ S+++++
Sbjct: 182 FKPAPKVDSAVVRLRPRTFPVQANNPKLLDTLVKQGFSQKRKMLRN-----NLKSLIDRD 236
Query: 255 YRT 257
T
Sbjct: 237 QLT 239
>gi|150402155|ref|YP_001329449.1| dimethyladenosine transferase [Methanococcus maripaludis C7]
gi|166221676|sp|A6VFS2.1|RSMA_METM7 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|150033185|gb|ABR65298.1| dimethyladenosine transferase [Methanococcus maripaludis C7]
Length = 263
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 122/213 (57%), Gaps = 14/213 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K GQ LK+ V+ + +A + D++LE+G G G LTK+L + K V +ELD R+
Sbjct: 5 KKLGQCFLKDKNFVKKAINRAELTDKDIVLEVGLGEGALTKELAKIAKKVYVIELDERLK 64
Query: 91 --VLELQRRFQSTPYSNRLKVIQGDVLKTDLPY--FDICVANIPYQISSPLTFKLLFHQP 146
E+ F++ +++I D LK DL F+ VAN+PYQISSP+TFK L +
Sbjct: 65 PFADEITSEFEN------VEIIWSDALKVDLKTLGFNKIVANLPYQISSPITFKFL--EE 116
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F A++M+Q EFA R+ +P K Y RLSV Q +A V + KV + F P P V+S++
Sbjct: 117 DFEVAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNSAI 176
Query: 207 VRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTL 238
V++ R+P+ V E + L+ F +N+T+
Sbjct: 177 VKLTKREPKYHVKDEEFFKKVLKAIFQHRNRTI 209
>gi|448353217|ref|ZP_21541994.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba hulunbeirensis JCM 10989]
gi|445640794|gb|ELY93880.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrialba hulunbeirensis JCM 10989]
Length = 285
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 9/227 (3%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLE---A 77
+ G+ ++ QH L + +++ + D +LEIG GTG LT +LLE A
Sbjct: 8 IARAGVRGDPNRDQHFLVDDRVLDRLPTYLTAIDADTSHVLEIGGGTGVLTDRLLETIGA 67
Query: 78 GKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPL 137
+ VE D + LQ F + RL VI+GD L+ DLP F V+N+PY +SS +
Sbjct: 68 DDHLTVVERDPPLAEFLQEEFSDAIDAGRLTVIEGDALEVDLPEFTSSVSNLPYGVSSEI 127
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
TF+LL P R ++MFQ+EFA R+VA+P Y RLSV+TQ +A + + K F
Sbjct: 128 TFRLL---PEQRPLVLMFQQEFAERMVAEPDTSEYGRLSVSTQHYADAELVESIPKEAFS 184
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFR 243
P P V S+VVR+ PR+P V N + F++ F ++ KT+ + R
Sbjct: 185 PAPAVQSAVVRLVPREPDYDVENEAFFLRFVKALFTQRRKTIRNGIR 231
>gi|424925257|ref|ZP_18348618.1| dimethyladenosine transferase [Pseudomonas fluorescens R124]
gi|404306417|gb|EJZ60379.1| dimethyladenosine transferase [Pseudomonas fluorescens R124]
Length = 272
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 122/233 (52%), Gaps = 16/233 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ KS D +LEIGPG G LT LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSISAKSGDRMLEIGPGQGALTAGLLNSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAGKSNFN---LHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS++VR+ P P P + + +R F ++ KTL + LK +++ E
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNT--LKQLMTAAE 234
>gi|49082884|gb|AAT50842.1| PA0592, partial [synthetic construct]
Length = 269
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDVIELDQDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLFHQ 145
L+ +F +R + QGD LK D V N+PY IS+PL F LL H
Sbjct: 71 PLLKLKFG---LESRFSLHQGDALKFDFASLVESGEKLRVVGNLPYNISTPLIFHLLEHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 PVIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEP--RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
+VR+ P P P +P + +R F ++ KTL + LK +LS+
Sbjct: 188 IVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNT--LKPLLSV 232
>gi|398875249|ref|ZP_10630427.1| dimethyladenosine transferase [Pseudomonas sp. GM67]
gi|398883045|ref|ZP_10638006.1| dimethyladenosine transferase [Pseudomonas sp. GM60]
gi|398197618|gb|EJM84594.1| dimethyladenosine transferase [Pseudomonas sp. GM60]
gi|398208179|gb|EJM94917.1| dimethyladenosine transferase [Pseudomonas sp. GM67]
Length = 272
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 118/225 (52%), Gaps = 14/225 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLNSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAGKSNFN---LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LHNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
VDS++VR+ P P P + + +R F ++ KTL + +L
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|110598757|ref|ZP_01387018.1| dimethyladenosine transferase [Chlorobium ferrooxidans DSM 13031]
gi|110339621|gb|EAT58135.1| dimethyladenosine transferase [Chlorobium ferrooxidans DSM 13031]
Length = 261
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 131/242 (54%), Gaps = 21/242 (8%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I+ K GQ+ L + + IV +G + D ILEIGPG G LT++++ VE D
Sbjct: 11 IAAKKKLGQNFLTDRNITRKIVASSGATADDNILEIGPGFGALTREIIAICPTFTVVEKD 70
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD-----ICVANIPYQISSPLTFKLL 142
++ ++ + LKV++ D L TDL + NIPY I+SP+ FKLL
Sbjct: 71 PKLAAFIRSEYPG------LKVLEADFLDTDLELLAGEKPLRVLGNIPYSITSPILFKLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H+ +F A +M Q E AMR+VA+P K Y L+V Q VS+L KVG+ FRP P V
Sbjct: 125 EHRRSFISATLMMQHEVAMRIVARPSTKDYGILAVQMQAFCDVSYLFKVGRKVFRPQPGV 184
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQ 262
DS+V+ ++P++ P + F+R F ++ KTL L+ L+++Y L A++
Sbjct: 185 DSAVISMKPKQESPVEESEGFRRFVRTAFHQRRKTL---------LNNLKESY-NLDAVE 234
Query: 263 SS 264
SS
Sbjct: 235 SS 236
>gi|422647520|ref|ZP_16710648.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. maculicola str. ES4326]
gi|330961062|gb|EGH61322.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 268
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 116/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ KS + +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKSEERLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F P + QGD LK D P+ V N+PY IS+PL F LL +
Sbjct: 71 PILNSQFAGKP---NFSLHQGDALKFDFNSLGAEPHSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMATGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKL 228
>gi|448399678|ref|ZP_21570938.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloterrigena limicola JCM 13563]
gi|445668695|gb|ELZ21322.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloterrigena limicola JCM 13563]
Length = 279
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 10/226 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKM 80
+ GI + QH L + +++ + D +LEIG GTG LT +LL G
Sbjct: 8 IARAGIRGDPDRDQHFLVDDRVLDRLPTYLTEIDADTSHLLEIGGGTGVLTDRLLAVGDE 67
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V VE D + L+ F + L VI+GD L+ DLP F V+N+PY +SS + F+
Sbjct: 68 VTVVERDPDLAAFLREEFADEIAAGNLTVIEGDALEIDLPDFTASVSNLPYGVSSEIAFR 127
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
L P + ++MFQ+EFA R+VA+ G Y RLSV++Q +A + + + K F PPP
Sbjct: 128 LF---PEGKPLVLMFQQEFAERMVAESGTSEYGRLSVSSQHYADIELVESIPKEAFSPPP 184
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFR 243
V S+V+R PR+P +V+ E+ FLR F ++ KT+ + R
Sbjct: 185 AVQSAVIRAVPREPDYEVDDEEF--FLRFVKALFTQRRKTIRNAIR 228
>gi|354610822|ref|ZP_09028778.1| Ribosomal RNA small subunit methyltransferase A [Halobacterium sp.
DL1]
gi|353195642|gb|EHB61144.1| Ribosomal RNA small subunit methyltransferase A [Halobacterium sp.
DL1]
Length = 279
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 116/209 (55%), Gaps = 4/209 (1%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + +++ I A +LEIG GTG LT +LL V AVE D+ L+
Sbjct: 23 QHFLVDDRVLDRIPTYAEGFDRSHVLEIGAGTGALTDRLLAVADHVTAVERDADYAAFLR 82
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
F ++RL V++GDVLK DLP F V+N+PY +SS TF+LL P + ++M+
Sbjct: 83 EEFADELAADRLTVLEGDVLKVDLPEFSCSVSNLPYGVSSETTFRLL---PLGQPLVLMY 139
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q+EFA R+ A+ G Y RLSV TQ +A V + V F P P+V S+VVR+ PR P
Sbjct: 140 QREFADRMAAESGTSDYGRLSVTTQHYADVEVVETVPPEAFDPQPRVQSAVVRLTPRDPD 199
Query: 216 PQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
V + F++ F ++ KT+ + R
Sbjct: 200 YVVEDESFFFDFVKALFTQRRKTVRNAIR 228
>gi|299143369|ref|ZP_07036449.1| dimethyladenosine transferase [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298517854|gb|EFI41593.1| dimethyladenosine transferase [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 288
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 121/225 (53%), Gaps = 13/225 (5%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G F KS GQ+ L + +V IV A I S D +LEIGPG G LT++L K V+
Sbjct: 14 LNKYGFRFSKSLGQNFLIDGNIVRKIVDSAEISSNDNVLEIGPGVGTLTEELCLRAKKVV 73
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD---------ICVANIPYQI 133
++E+D+ + L+ +S PY N +K+I DVLKTDL F VAN+PY +
Sbjct: 74 SIEIDNHLKELLK---ESLPYEN-VKIIFNDVLKTDLKKFTEQEFGGETFKVVANLPYYV 129
Query: 134 SSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGK 193
++P+ KL+ +M QKE A R A P K Y LSV Q ++ V + V K
Sbjct: 130 TTPIISKLIEEDLNIESITVMIQKEVANRFSASPSTKDYGSLSVFIQFYSDVKYEFTVPK 189
Query: 194 NNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
N F P P VDS+VV ++ +K P ++ + +R F ++ KTL
Sbjct: 190 NVFMPKPNVDSAVVNLKIKKDLPDIDRDKLFKVVRAAFSKRRKTL 234
>gi|15595789|ref|NP_249283.1| dimethyladenosine transferase [Pseudomonas aeruginosa PAO1]
gi|418584836|ref|ZP_13148893.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|418590789|ref|ZP_13154694.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|421515212|ref|ZP_15961898.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa PAO579]
gi|27151603|sp|Q9I5U5.1|RSMA_PSEAE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|9946464|gb|AAG03981.1|AE004495_5 rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
PAO1]
gi|375045168|gb|EHS37754.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|375050335|gb|EHS42817.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|404348940|gb|EJZ75277.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa PAO579]
Length = 268
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDVIELDQDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLFHQ 145
L+ +F +R + QGD LK D V N+PY IS+PL F LL H
Sbjct: 71 PLLKLKFG---LESRFSLHQGDALKFDFASLVESGEKLRVVGNLPYNISTPLIFHLLEHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 PVIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEP--RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
+VR+ P P P +P + +R F ++ KTL + LK +LS+
Sbjct: 188 IVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNT--LKPLLSV 232
>gi|330812131|ref|YP_004356593.1| dimethyladenosine transferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380239|gb|AEA71589.1| putative dimethyladenosine transferase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 272
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD +V
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIRAKPDDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAG---RSNFSLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLSNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHAVLPHPAKDHRMLERVVREAFNQRRKTLRNTLKL 228
>gi|339492698|ref|YP_004712991.1| dimethyladenosine transferase [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|338800070|gb|AEJ03902.1| dimethyladenosine transferase [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 264
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K + ++EIGPG G LT+ LL++G + VELD ++
Sbjct: 10 KRFGQNFLHDAGVIHRILRAIHAKPGERLVEIGPGQGALTEGLLDSGAQLDVVELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
LQ +F N + QGD LK D P V N+PY IS+PL F LL H
Sbjct: 70 PILQAKFAGRENFN---LNQGDALKFDFSRLSQEPASLRIVGNLPYNISTPLIFHLLEHA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL AQPG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 127 QLIRDMHFMLQKEVVERLAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLK 226
>gi|154281463|ref|XP_001541544.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411723|gb|EDN07111.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 142
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQH+LKNP + ++IV KA +K +D +LEIGPGTGNLT K+LE K VIAVELD RM E+
Sbjct: 39 GQHVLKNPGVAQAIVDKADLKQSDTVLEIGPGTGNLTVKILEKAKKVIAVELDPRMAAEV 98
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQ 132
+R Q P RL+V+ GDV+KTDLPYFD+C++N PYQ
Sbjct: 99 TKRVQGKPEQKRLEVLLGDVIKTDLPYFDVCISNTPYQ 136
>gi|348026759|ref|YP_004766564.1| ribosomal RNA small subunit methyltransferase A [Megasphaera
elsdenii DSM 20460]
gi|341822813|emb|CCC73737.1| ribosomal RNA small subunit methyltransferase A [Megasphaera
elsdenii DSM 20460]
Length = 283
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 129/226 (57%), Gaps = 14/226 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ +K GQ+ L +V+ I AGI D +LEIGPG G LT+ L E G V AVEL
Sbjct: 20 GLRMNKKLGQNFLIRHAVVDDIADAAGIGEGDPVLEIGPGIGTLTQALAETGAAVTAVEL 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSPLTFK 140
D ++ L + + Y N ++V+ GD+L+ D+ F +C AN+PY I++P+ K
Sbjct: 80 DDHLLPVLDKTLEH--YDN-VRVVHGDILRIDIEEVMNHQPFTVC-ANLPYYITTPIIMK 135
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL + + ++M QKE A R+VA+PG K+Y LSV+ Q + + L ++ F P P
Sbjct: 136 LLEQKLPIKRIVVMVQKEVAERMVAEPGHKIYGALSVSVQYYTKPQMLFEISPKCFMPAP 195
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
+V S+VV ++ R+ +P V+ ++ F ++ F ++ KT ++ +
Sbjct: 196 EVTSAVVSMDVRQ-KPPVDLLDEKRFFQVVKAAFQQRRKTFANALK 240
>gi|116054320|ref|YP_788765.1| dimethyladenosine transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889333|ref|YP_002438197.1| dimethyladenosine transferase [Pseudomonas aeruginosa LESB58]
gi|254237194|ref|ZP_04930517.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
C3719]
gi|296387098|ref|ZP_06876597.1| dimethyladenosine transferase [Pseudomonas aeruginosa PAb1]
gi|355647009|ref|ZP_09054762.1| ribosomal RNA small subunit methyltransferase A [Pseudomonas sp.
2_1_26]
gi|392982005|ref|YP_006480592.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Pseudomonas
aeruginosa DK2]
gi|416855756|ref|ZP_11911677.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa 138244]
gi|416873060|ref|ZP_11917187.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa 152504]
gi|419756074|ref|ZP_14282426.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|421172357|ref|ZP_15630132.1| dimethyladenosine transferase [Pseudomonas aeruginosa CI27]
gi|421178504|ref|ZP_15636117.1| dimethyladenosine transferase [Pseudomonas aeruginosa E2]
gi|115589541|gb|ABJ15556.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169125|gb|EAZ54636.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
C3719]
gi|218769556|emb|CAW25316.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
LESB58]
gi|334842654|gb|EGM21257.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa 138244]
gi|334845358|gb|EGM23921.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa 152504]
gi|354828151|gb|EHF12278.1| ribosomal RNA small subunit methyltransferase A [Pseudomonas sp.
2_1_26]
gi|384397736|gb|EIE44147.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|392317510|gb|AFM62890.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa DK2]
gi|404537953|gb|EKA47516.1| dimethyladenosine transferase [Pseudomonas aeruginosa CI27]
gi|404548353|gb|EKA57308.1| dimethyladenosine transferase [Pseudomonas aeruginosa E2]
gi|453045974|gb|EME93692.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas aeruginosa PA21_ST175]
Length = 268
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDVIELDQDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLFHQ 145
L+ +F +R + QGD LK D V N+PY IS+PL F LL H
Sbjct: 71 PLLKLKFG---LESRFSLHQGDALKFDFASLVESGEKLRVVGNLPYNISTPLIFHLLEHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 PVIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEP--RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
+VR+ P P P +P + +R F ++ KTL + LK +LS+
Sbjct: 188 IVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNT--LKPLLSV 232
>gi|76802475|ref|YP_327483.1| dimethyladenosine transferase [Natronomonas pharaonis DSM 2160]
gi|119365037|sp|Q3IPM0.1|RSMA_NATPD RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|76558340|emb|CAI49930.1| probable dimethyladenosine transferase [Natronomonas pharaonis DSM
2160]
Length = 274
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 113/205 (55%), Gaps = 4/205 (1%)
Query: 57 TDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK 116
TD +LEIG GTG LT +LL+ V +E D + L F + L VI+GD L+
Sbjct: 43 TDHVLEIGGGTGALTDRLLDVADRVTVIERDPGLATFLTDEFADEIEAGSLTVIEGDALE 102
Query: 117 TDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS 176
LP F V+N+PY +SS + F+LL P R ++MFQ+EFA R+ A+PG Y RLS
Sbjct: 103 VPLPDFTASVSNLPYGVSSEIAFRLL---PEKRPLVLMFQQEFAERMAAEPGTDEYGRLS 159
Query: 177 VNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKN 235
V +A V + V K F PPP V+S+VVR PR+P +V E + +R F ++
Sbjct: 160 VTAGHYADVEVVEPVPKEAFSPPPAVESAVVRTTPREPPYEVPDDELFMRLVRAVFTQRR 219
Query: 236 KTLSSIFRLKNVLSMLEKNYRTLQA 260
KT+ + R +S +E ++A
Sbjct: 220 KTMRNAVRNTTHISGIEDAEAVVEA 244
>gi|226227288|ref|YP_002761394.1| dimethyladenosine transferase [Gemmatimonas aurantiaca T-27]
gi|226090479|dbj|BAH38924.1| dimethyladenosine transferase [Gemmatimonas aurantiaca T-27]
Length = 303
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 130/250 (52%), Gaps = 24/250 (9%)
Query: 3 GGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILE 62
GG R +G GP +G L A K GQH LK+ ++ SI G ++E
Sbjct: 8 GGASRFRRG----GPPRGDRLPAP----RKRFGQHFLKDTRVLSSIADALGDVRDRTVIE 59
Query: 63 IGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL--- 119
IGPG G LT L+E + VIA+E+D + L+ R+ P+ +++++ DVL+T+L
Sbjct: 60 IGPGRGALTDLLVERARRVIAIEIDRDLAAHLRARYADRPH---VEIVEADVLQTNLAAL 116
Query: 120 ---PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS 176
PY + N+PY I++P+ F L QP A+ + QKE A R+ A PGDK+Y LS
Sbjct: 117 AGEPY--VLAGNVPYYITTPIIFHALV-QPRPDVAVYLVQKEVADRMAAPPGDKIYGALS 173
Query: 177 VNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNP---VEWDGFLRICFIR 233
VN Q V + KV + F P P VDS+VVR+ PR P V P + F+ F
Sbjct: 174 VNLQAVVGVELIRKVPPSAFNPAPAVDSAVVRVVPR-PDAVVEPELEARFRSFVLAAFGL 232
Query: 234 KNKTLSSIFR 243
+ K L + R
Sbjct: 233 RRKQLIRVVR 242
>gi|333909966|ref|YP_004483699.1| ribosomal RNA small subunit methyltransferase A [Methanotorris
igneus Kol 5]
gi|333750555|gb|AEF95634.1| Ribosomal RNA small subunit methyltransferase A [Methanotorris
igneus Kol 5]
Length = 272
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 126/224 (56%), Gaps = 24/224 (10%)
Query: 27 GISFHKSK--GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
GI+ SK GQ L + V+ V A + DV+LEIG G G LT++L + K V +
Sbjct: 6 GITIKPSKKLGQCFLIDKNFVKKAVDAANLTKDDVVLEIGLGRGILTEELAKNAKKVYVI 65
Query: 85 ELDSRMVLELQRRFQSTPYSNRLK-------VIQGDVLKTDLPY--FDICVANIPYQISS 135
E+D ++ PY+ ++ VI GD LK + F+ VAN+PYQISS
Sbjct: 66 EIDEKL----------RPYAEKITREYDNVDVIWGDALKVNFDELGFNKVVANLPYQISS 115
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
P+TFKLL + F A++M+Q EFA R+VA+ G K Y RLSV Q A + + KV +
Sbjct: 116 PITFKLL--KTDFDVAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQYKADIEFICKVPPSA 173
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTL 238
F P PKV+S++V+I R+P +V E ++ LR F KNKT+
Sbjct: 174 FSPRPKVNSAIVKIVKREPLFKVEDEEFFENVLRALFQHKNKTV 217
>gi|389848182|ref|YP_006350421.1| dimethyladenosine transferase [Haloferax mediterranei ATCC 33500]
gi|448618389|ref|ZP_21666626.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax mediterranei ATCC 33500]
gi|388245488|gb|AFK20434.1| dimethyladenosine transferase [Haloferax mediterranei ATCC 33500]
gi|445746760|gb|ELZ98218.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax mediterranei ATCC 33500]
Length = 287
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 126/238 (52%), Gaps = 7/238 (2%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIA 83
G+ + QH L + +V+ I TD +LEIG G G LT +LL V
Sbjct: 24 AGVRGDPDRDQHFLVDDRVVDRIPTYLP-DDTDHSHVLEIGGGPGVLTDRLLAVADRVTV 82
Query: 84 VELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLF 143
VE D L+R F ++RL VI+GD L+ DLP F CV+N+PY ISS ++F+LL
Sbjct: 83 VEQDRTFADHLRREFSDPVEADRLTVIEGDALEADLPEFTACVSNLPYGISSEISFRLL- 141
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
P + ++MFQKEF R+ A+ G Y RLSV+ Q + V V + F P P V
Sbjct: 142 --PRGKPLVLMFQKEFGERMAAESGTSEYGRLSVSAQHYGDVEVCEIVPREAFDPKPAVQ 199
Query: 204 SSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
S++VR+ PR P +V+ E + F++ F ++ KT+ + R + +S L ++A
Sbjct: 200 SAIVRVTPRDPDYEVDNEEFFFDFVKALFTQRRKTIRNGIRNTSHISGLSDPEAVVEA 257
>gi|313111762|ref|ZP_07797555.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
39016]
gi|386068487|ref|YP_005983791.1| dimethyladenosine transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|421165470|ref|ZP_15623798.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 700888]
gi|310884057|gb|EFQ42651.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
39016]
gi|348037046|dbj|BAK92406.1| dimethyladenosine transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|404541683|gb|EKA51034.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 700888]
Length = 268
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDVIELDQDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLFHQ 145
L+ +F +R + QGD LK D V N+PY IS+PL F LL H
Sbjct: 71 PLLKLKFG---LESRFSLHQGDALKFDFTSLVESGEKLRVVGNLPYNISTPLIFHLLEHA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 PVIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEP--RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
+VR+ P P P +P + +R F ++ KTL + LK +LS+
Sbjct: 188 IVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNT--LKPLLSV 232
>gi|389722117|ref|ZP_10188796.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein,
partial [Rhodanobacter sp. 115]
gi|388443685|gb|EIL99823.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein,
partial [Rhodanobacter sp. 115]
Length = 262
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 116/223 (52%), Gaps = 15/223 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KS GQH L +E IV ++ D ++EIGPG G LT LL A + A+ELD+ ++
Sbjct: 7 KSFGQHFLHERRYIERIVSSISPRADDFVVEIGPGEGALTLPLLAAAGKLTAIELDTDLI 66
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTD---------LPYFDICVANIPYQISSPLTFKLL 142
LQ R + L +I DVLK D +P I N+PY ISSP+ F +
Sbjct: 67 PGLQERAAAV---GELAIIHADVLKVDFTALAHRHGVPRLRIA-GNLPYYISSPILFHCV 122
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H A + M QKE R+ A+PG K+Y RLSV QL RV L V FRPPPKV
Sbjct: 123 EHAAAIQDMHFMLQKEVVDRMAAEPGSKVYGRLSVMLQLACRVEPLFNVPPGAFRPPPKV 182
Query: 203 DSSVVRIEPRKP--RPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
DS+VVR+ P P R +P +R F ++ KTL + R
Sbjct: 183 DSAVVRLIPLTPVQRHDADPERLYAVVRAAFAQRRKTLGNALR 225
>gi|220935881|ref|YP_002514780.1| dimethyladenosine transferase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219997191|gb|ACL73793.1| dimethyladenosine transferase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 267
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 110/220 (50%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQH L ++E +V + + ++EIGPG G LT LLE +++ VELD ++
Sbjct: 9 KRFGQHFLHETAIIERMVAAIAPRPGEALVEIGPGLGALTAPLLERCRVLHVVELDRDVI 68
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
L R Q L+V Q D L+ D V N+PY IS+PL F LL
Sbjct: 69 PPLVERCQGL---GELRVHQADALRFDFATLAPEGGQLRVVGNLPYNISTPLIFHLLKSA 125
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P R + QKE RL A P + Y RLSV TQ H R L +VG FRPPPKVDS+
Sbjct: 126 PRIRDMHFLLQKEVVDRLAAAPNTRDYGRLSVMTQYHCRAEALFRVGPGAFRPPPKVDSA 185
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
VR+ P + P P + + + F ++ KTL + R
Sbjct: 186 YVRLTPWETLPHPAADEALFASLVNQAFTQRRKTLRNAVR 225
>gi|289649007|ref|ZP_06480350.1| dimethyladenosine transferase [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 268
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F + P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILTGQFGNKPNFN---LHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|423699688|ref|ZP_17674178.1| dimethyladenosine transferase [Pseudomonas fluorescens Q8r1-96]
gi|387996837|gb|EIK58167.1| dimethyladenosine transferase [Pseudomonas fluorescens Q8r1-96]
Length = 272
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD +V
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIRAKPDDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAG---RSNFSLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLSNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|355571047|ref|ZP_09042317.1| Ribosomal RNA small subunit methyltransferase A [Methanolinea tarda
NOBI-1]
gi|354826329|gb|EHF10545.1| Ribosomal RNA small subunit methyltransferase A [Methanolinea tarda
NOBI-1]
Length = 256
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 124/223 (55%), Gaps = 16/223 (7%)
Query: 36 QHILKNPLLVESIVQKAGIKSTD--VILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLE 93
QH L + +E I AGI + +LE+GPG G+LT+ LLE G V+AVE+D +V
Sbjct: 7 QHFLVDRKAIERI---AGIIRVEGRTVLEVGPGRGSLTEALLERGARVVAVEIDPGLVEM 63
Query: 94 LQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAII 153
L RF NRL V+ GD + LP FD+ V+N+PY SS +TF+LL + F A++
Sbjct: 64 LSERFLREIGENRLVVVHGDAVSCPLPGFDVVVSNLPYSASSKITFRLL--ETGFEEAVL 121
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRK 213
M+Q EFA R++A G RLSV Q + V + V F P PKV S+V+ I PR+
Sbjct: 122 MYQSEFADRMLAPAGTPECGRLSVMVQTYCAVGRVFDVPPQAFSPRPKVRSTVLHIVPRE 181
Query: 214 PRPQVNPVE----WDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
P + P+ + +R F + KT+ + LK+ SMLE
Sbjct: 182 P---LFPIRDRDLYARVVRALFSHRRKTVRN--SLKSAGSMLE 219
>gi|67923799|ref|ZP_00517261.1| RRNA 16S rRNA dimethylase [Crocosphaera watsonii WH 8501]
gi|416399871|ref|ZP_11687001.1| Dimethyladenosine transferase [Crocosphaera watsonii WH 0003]
gi|67854342|gb|EAM49639.1| RRNA 16S rRNA dimethylase [Crocosphaera watsonii WH 8501]
gi|357262340|gb|EHJ11488.1| Dimethyladenosine transferase [Crocosphaera watsonii WH 0003]
Length = 271
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 126/224 (56%), Gaps = 19/224 (8%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K QH L++ +E I+Q A +K++D +LEIGPGTG LT++LL V+AVELD +
Sbjct: 5 RKRFAQHWLRSETALEQIIQAANLKNSDRLLEIGPGTGILTRRLLPLVDSVLAVELDWDL 64
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFK 140
+L + F + Y N L ++QGD+LK D+ P F + VANIPY I+SP+ K
Sbjct: 65 CKKLVKSFGN--YDNFL-LLQGDILKLDITTEAQDFPKFLPINKVVANIPYNITSPILEK 121
Query: 141 LLFH-----QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL P + +++ QKE A R+VA PG+K Y LSV Q A +++ V +
Sbjct: 122 LLGRISSPKTPFYDLIVLLIQKEVAQRIVAYPGNKTYGALSVKMQYLADCNYICDVPRKA 181
Query: 196 FRPPPKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTL 238
F PPPKVDS+V+ PR V+P + + + F + K L
Sbjct: 182 FSPPPKVDSAVITFRPRVLANSAVDPKRLETLINLGFSNRRKML 225
>gi|77461356|ref|YP_350863.1| dimethyladenosine transferase [Pseudomonas fluorescens Pf0-1]
gi|118600888|sp|Q3K5T2.1|RSMA_PSEPF RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|77385359|gb|ABA76872.1| dimethyladenosine transferase [Pseudomonas fluorescens Pf0-1]
Length = 272
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 122/233 (52%), Gaps = 16/233 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ D +LEIGPG G LT +L +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSINAKAGDRMLEIGPGQGALTAGILNSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAGKSNFN---LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS++VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNT--LKQLLSNAE 234
>gi|146281120|ref|YP_001171273.1| dimethyladenosine transferase [Pseudomonas stutzeri A1501]
gi|145569325|gb|ABP78431.1| dimethyladenosine transferase [Pseudomonas stutzeri A1501]
Length = 264
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K + ++EIGPG G LT+ LL +G + VELD ++
Sbjct: 10 KRFGQNFLHDAGVIHRILRAIHAKPGERLVEIGPGQGALTEGLLHSGAQLDVVELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
LQ +F N + QGD LK D P V N+PY IS+PL F LL H
Sbjct: 70 PILQAKFAGRENFN---LNQGDALKFDFSRLSQEPASLRIVGNLPYNISTPLIFHLLEHA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL AQPG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 127 QLIRDMHFMLQKEVVERLAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLK 226
>gi|398981221|ref|ZP_10689405.1| dimethyladenosine transferase [Pseudomonas sp. GM25]
gi|398133939|gb|EJM23120.1| dimethyladenosine transferase [Pseudomonas sp. GM25]
Length = 272
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 122/233 (52%), Gaps = 16/233 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ D +LEIGPG G LT +L +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSISAKAGDRMLEIGPGQGALTAGILNSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F N + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAGKSNFN---LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS++VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNT--LKQLLSNAE 234
>gi|359780754|ref|ZP_09283979.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas psychrotolerans L19]
gi|359370814|gb|EHK71380.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas psychrotolerans L19]
Length = 263
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 115/219 (52%), Gaps = 10/219 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + + +LEIGPG G LTK LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHGRPGERLLEIGPGQGALTKGLLGSGARLDVIELDQDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----CVANIPYQISSPLTFKLLFHQP 146
L+ +F P + QGD +K DL V N+PY IS+PL F LL
Sbjct: 71 PLLRLKFGLNPL---FTLHQGDAMKYDLSSIAAGDRLRVVGNLPYNISTPLIFHLLSFAD 127
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
M QKE RL A PG+ + RLS+ Q H RV HL VG F PPPKVDS++
Sbjct: 128 IIADMHFMLQKEVVERLAAVPGNGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSAI 187
Query: 207 VRIEPRKPRPQV--NPVEWDGFLRICFIRKNKTLSSIFR 243
VR+ P RP V +PV + +R F ++ KTL + +
Sbjct: 188 VRLVPHTERPHVARDPVLLERVVREAFGQRRKTLRNTLK 226
>gi|409395477|ref|ZP_11246547.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Chol1]
gi|409395572|ref|ZP_11246637.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Chol1]
gi|409119838|gb|EKM96211.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Chol1]
gi|409119859|gb|EKM96231.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. Chol1]
Length = 264
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K+ + ++EIGPG G LT+ LL++G + VELD ++
Sbjct: 10 KRFGQNFLHDAGVIHRILRAIHPKAGERLVEIGPGQGALTEGLLDSGAHLDVVELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLFHQ 145
LQ +F + QGD LK D + V N+PY IS+PL F LL H
Sbjct: 70 PILQSKFAG---RENFTLHQGDALKFDFAWLSQEPASLRIVGNLPYNISTPLIFHLLEHA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A+PG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 127 GLIRDMHFMLQKEVVERLAAEPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLK 226
>gi|22298201|ref|NP_681448.1| dimethyladenosine transferase [Thermosynechococcus elongatus BP-1]
gi|27151563|sp|P59157.1|RSMA_THEEB RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|22294380|dbj|BAC08210.1| dimethyladenosine transferase [Thermosynechococcus elongatus BP-1]
Length = 265
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 123/224 (54%), Gaps = 12/224 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH L++ ++ I+ A + D +LEIGPG G LT+ LL +G V+AVELD
Sbjct: 2 IRARKRFGQHWLRSEAILAQIIAAAELHPGDRVLEIGPGRGALTRPLLVSGAEVVAVELD 61
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--CVANIPYQISSPLTFKLLF-- 143
+ +L+R+F S R ++I+GD+L+ DL VANIPY I+ PL LL
Sbjct: 62 RDLCGQLRRQFDS----ERFQLIEGDILRLDLAPLGCNKVVANIPYNITGPLLGHLLGSI 117
Query: 144 ---HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
+PAF I++ QKE RL+A PG K Y LSV Q A + V F+PPP
Sbjct: 118 ARPRRPAFERLILLVQKEIGDRLMASPGSKAYGALSVRVQFLATCEKVCAVPPRAFQPPP 177
Query: 201 KVDSSVVRIEPRKPRPQVNPVEW-DGFLRICFIRKNKTLSSIFR 243
KVDS VV + P + P+V +W + L+ F + K L++ +
Sbjct: 178 KVDSVVVCLRPHRTLPRVGSPQWLETLLKQGFATRRKMLANALK 221
>gi|378953236|ref|YP_005210724.1| protein KsgA [Pseudomonas fluorescens F113]
gi|359763250|gb|AEV65329.1| KsgA [Pseudomonas fluorescens F113]
Length = 272
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 116/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD +V
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIRAKPDDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAG---RSNFSLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLSNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|448678523|ref|ZP_21689530.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula argentinensis DSM 12282]
gi|445772510|gb|EMA23555.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula argentinensis DSM 12282]
Length = 285
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 129/250 (51%), Gaps = 10/250 (4%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
+ QH L + +++ I + A D+ +LEIG G G LT +LL + V AVE D
Sbjct: 26 QDQHFLVDDRVLDRIPEYATDAGIDLSHVLEIGAGPGALTDRLLATAEKVTAVERDPDFA 85
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+ F ++RL V++GD L+ DLP F ++N+PY SS + F+LL Q R
Sbjct: 86 AHLREEFAEEVAADRLTVVEGDALEVDLPEFTASISNLPYGASSEIAFRLLPEQ---RPL 142
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++MFQ+EFA R+ A P Y RLSV +A V + V F P P+V S++VR P
Sbjct: 143 LLMFQQEFAERMAADPATDEYGRLSVTAGHYADVEVVETVPPEAFDPQPRVTSALVRTTP 202
Query: 212 RKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLG 270
RKP V + + FL+ F ++ KT+ + R +S L L A+ + + L
Sbjct: 203 RKPDYTVPSDDFFMDFLKAVFTQRRKTMRNAVRNTAHISGLGD----LDAVVEAADEDLM 258
Query: 271 NTEIGTDTPS 280
+ G TP+
Sbjct: 259 SARAGKLTPA 268
>gi|399000542|ref|ZP_10703268.1| dimethyladenosine transferase [Pseudomonas sp. GM18]
gi|398129769|gb|EJM19125.1| dimethyladenosine transferase [Pseudomonas sp. GM18]
Length = 272
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 114/221 (51%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTAGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAGKSNFN---LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLHNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHAVLPHPAKDHRLLERVVREAFNQRRKTLRNTLKL 228
>gi|260102234|ref|ZP_05752471.1| dimethyladenosine transferase [Lactobacillus helveticus DSM 20075]
gi|260083975|gb|EEW68095.1| dimethyladenosine transferase [Lactobacillus helveticus DSM 20075]
Length = 291
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ A I + D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P +R K++ DVLK + +FD+ VAN+PY I++P+
Sbjct: 86 EILQNELPKKIGDAPLEDRFKLMLKDVLKANFKEDLAGFFDMSKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL A+PG K Y L+++ Q V L+V N+F
Sbjct: 146 IFALAESDLHFASLTLMMQKEVAERLEAKPGSKEYGPLTISVQTEMDVKVALEVNHNSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P PKVDSSVV + P K +P++ N + +++CF ++ KTL++
Sbjct: 206 PRPKVDSSVVVLTPLKNKPEIENRKHFVWVVKMCFSQRRKTLNN 249
>gi|71735918|ref|YP_272932.1| dimethyladenosine transferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257483106|ref|ZP_05637147.1| dimethyladenosine transferase [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|416014380|ref|ZP_11562207.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|416021882|ref|ZP_11567173.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422406489|ref|ZP_16483517.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|422595492|ref|ZP_16669779.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|422682321|ref|ZP_16740587.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|118600884|sp|Q48NT7.1|RSMA_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|71556471|gb|AAZ35682.1| dimethyladenosine transferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320326009|gb|EFW82067.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320332056|gb|EFW87992.1| dimethyladenosine transferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881716|gb|EGH15865.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330985796|gb|EGH83899.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331011661|gb|EGH91717.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 268
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F + P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILTGQFGNKPNFN---LHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKL 228
>gi|407368273|ref|ZP_11114805.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas mandelii JR-1]
Length = 272
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 115/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLGSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAGKSNFN---LHQGDALKFDFNSLNAAPGSLRVVGNLPYNISTPLIFHLLHNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVQRMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKL 228
>gi|422607556|ref|ZP_16679554.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330891196|gb|EGH23857.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. mori str. 301020]
Length = 268
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F + P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILTGQFGNKPNFN---LHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERVVREAFNQRRKTLRNTLKL 228
>gi|289627688|ref|ZP_06460642.1| dimethyladenosine transferase [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|422583663|ref|ZP_16658784.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330868491|gb|EGH03200.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 268
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F + P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILTGQFGNKPNFN---LHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHWRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHRVLERIVREAFNQRRKTLRNTLKL 228
>gi|161506815|ref|YP_001576769.1| dimethyladenosine transferase [Lactobacillus helveticus DPC 4571]
gi|172048354|sp|A8YX55.1|RSMA_LACH4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|160347804|gb|ABX26478.1| Dimethyladenosine transferase [Lactobacillus helveticus DPC 4571]
Length = 294
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ A I + D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P +R K++ DVLK + +FD+ VAN+PY I++P+
Sbjct: 86 EILQNELPKKIGDAPLEDRFKLMLKDVLKANFKEDLAGFFDMSKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL A+PG K Y L+++ Q V L+V N+F
Sbjct: 146 IFALAESDLHFASLTLMMQKEVAERLEAKPGSKEYGPLTISVQTEMDVKVALEVNHNSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P PKVDSSVV + P K +P++ N + +++CF ++ KTL++
Sbjct: 206 PRPKVDSSVVVLTPLKNKPEIENRKHFVWVVKMCFSQRRKTLNN 249
>gi|154253780|ref|YP_001414604.1| dimethyladenosine transferase [Parvibaculum lavamentivorans DS-1]
gi|154157730|gb|ABS64947.1| dimethyladenosine transferase [Parvibaculum lavamentivorans DS-1]
Length = 281
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 126/238 (52%), Gaps = 13/238 (5%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVE 85
G++ KS GQ+ L + L I + AG+ ++E+GPG G LT+ LL+ G + VIA+E
Sbjct: 19 GLAPQKSLGQNFLLDLNLTGRIARAAGVLDGYDVVEVGPGPGGLTRALLDNGARRVIAIE 78
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI----CVANIPYQISSPLTFKL 141
D R + L+ S Y RL +++GD L+ D+ VAN+PY + +PL
Sbjct: 79 RDRRCIAALEE--ISAAYPGRLVIVEGDALEVDMKSLVTSPARIVANLPYNVGTPLLVGW 136
Query: 142 LFHQPA---FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
L +P F +MFQ+E A R+VAQPG K Y RL+V Q A+ L V + F P
Sbjct: 137 LQTEPWPAWFDSLTLMFQREVAERIVAQPGGKAYGRLAVLAQWRAKAQILFDVDRRAFTP 196
Query: 199 PPKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIFR--LKNVLSMLEK 253
PP V SSVV + PR P + NP + + F ++ K L S R + L +LEK
Sbjct: 197 PPSVTSSVVELIPRAVPLAEANPRVLEAVVAAAFGQRRKMLRSSLRTLTPHSLPLLEK 254
>gi|197105173|ref|YP_002130550.1| dimethyladenosine transferase [Phenylobacterium zucineum HLK1]
gi|226732606|sp|B4RBS4.1|RSMA_PHEZH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|196478593|gb|ACG78121.1| dimethyladenosine transferase [Phenylobacterium zucineum HLK1]
Length = 285
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 118/232 (50%), Gaps = 13/232 (5%)
Query: 17 PYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLE 76
P + L A G+ K+ GQH L + + I + A + DV++E+GPG G LT+ LLE
Sbjct: 7 PTLREALEAHGLWAKKAFGQHFLLDLNITRKIARLAQVGDGDVVIEVGPGPGGLTRALLE 66
Query: 77 AGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----CVANIPY 131
G VIAVE D R LQ + P+ L ++ GD L D V+N+PY
Sbjct: 67 TGARVIAVEKDERFRPLLQEVADAAPH---LTLVFGDALTADEAALSAGRPAHLVSNLPY 123
Query: 132 QISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
+ +PL K L +MFQKE A R+ A PG+ Y RL+V Q A ++ V
Sbjct: 124 NVGTPLLIKWLTGPWTPASLTLMFQKEVADRITAAPGEDAYGRLAVIAQATADARPVMDV 183
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSS 240
F PPPKV+S+VVR+EPR RP +P D ++ F ++ K L S
Sbjct: 184 PARAFTPPPKVESAVVRLEPRAARP--SPERLDALQKVTAAAFGQRRKMLRS 233
>gi|448622895|ref|ZP_21669544.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax denitrificans ATCC 35960]
gi|445753403|gb|EMA04820.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax denitrificans ATCC 35960]
Length = 287
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 129/258 (50%), Gaps = 18/258 (6%)
Query: 16 GPYQGQGLGA---------GGISFHKSKGQHILKNPLLVESI---VQKAGIKSTDVILEI 63
G QG+G A G + QH L + +V+ I + + +S +LEI
Sbjct: 5 GSEQGRGTAARDPDALIRRAGARGNPDHDQHFLVDDRVVDRIPTYLPEDADRSH--VLEI 62
Query: 64 GPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD 123
G G G LT +LL V VE D L+R F S RL V++GD L DLP F
Sbjct: 63 GGGPGVLTDRLLGVADRVTVVEQDRTFAEHLRREFADEVESGRLTVVEGDALDVDLPEFT 122
Query: 124 ICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
CV+N+PY ISS ++F+LL P + ++MFQKEF R+ A+ G Y RLSV+TQ +
Sbjct: 123 ACVSNLPYGISSEISFRLL---PRGKPLVLMFQKEFGERMAAEAGTSEYGRLSVSTQHYG 179
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWD-GFLRICFIRKNKTLSSIF 242
V V + F P P V S VVRI PR P +V+ + F++ F ++ KT+ +
Sbjct: 180 DVEVCEHVPREAFDPKPAVQSVVVRITPRDPDYEVDDEAFFLDFVKALFTQRRKTIRNGI 239
Query: 243 RLKNVLSMLEKNYRTLQA 260
R +S L ++A
Sbjct: 240 RNTAHISGLSDPEAVVEA 257
>gi|433590731|ref|YP_007280227.1| dimethyladenosine transferase [Natrinema pellirubrum DSM 15624]
gi|448331866|ref|ZP_21521116.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema pellirubrum DSM 15624]
gi|433305511|gb|AGB31323.1| dimethyladenosine transferase [Natrinema pellirubrum DSM 15624]
gi|445628435|gb|ELY81742.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Natrinema pellirubrum DSM 15624]
Length = 278
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 121/226 (53%), Gaps = 10/226 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQ--KAGIKSTDVILEIGPGTGNLTKKLLEAGKM 80
+ G+ + QH L + +++ + +A T +LEIG GTG LT +LL G
Sbjct: 8 IARAGVRGDPDRDQHFLVDDRVLDRLPTYLEAIDADTSHLLEIGGGTGALTDRLLAVGDE 67
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V VE D + L+ F + L VI+GD L DLP F V+N+PY +SS + F+
Sbjct: 68 VTVVERDRDLAEFLREEFADEIAAGELTVIEGDALAVDLPDFTASVSNLPYGVSSEIAFR 127
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
L P + ++MFQ+EFA R+VA+PG Y RLSV++Q +A V + + K F P P
Sbjct: 128 LF---PEKKPLVLMFQQEFAERMVAEPGTSEYGRLSVSSQHYADVELVESIPKEAFDPQP 184
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
V S+VVR PR+P V + D FLR F ++ KT+ + R
Sbjct: 185 AVQSAVVRAVPREPDYTV--ADEDFFLRFVKAVFTQRRKTVRNAIR 228
>gi|398853804|ref|ZP_10610396.1| dimethyladenosine transferase [Pseudomonas sp. GM80]
gi|398238421|gb|EJN24150.1| dimethyladenosine transferase [Pseudomonas sp. GM80]
Length = 272
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 121/233 (51%), Gaps = 16/233 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K D +LEIGPG G LT LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSISAKPDDRLLEIGPGQGALTAGLLNSGGQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F + + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAG---KSNFNLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS++VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKQLLSNAE 234
>gi|395241868|ref|ZP_10418868.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
pasteurii CRBIP 24.76]
gi|394480616|emb|CCI85108.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
pasteurii CRBIP 24.76]
Length = 293
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 136/245 (55%), Gaps = 17/245 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ A +K D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDHAAIMGIVEAAEVKPGDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFDI-----CVANIPYQISSPL 137
+L EL ++ ++R K++ D+L+ D +FD VAN+PY I++P+
Sbjct: 86 EILHNELPQKIGDDELADRFKLLLKDILQADFRNDIGDFFDFDQEIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL A P K Y L++ Q +V L VG N+F
Sbjct: 146 IFSLANSDLNFSSLTLMMQKEVAERLEAGPNSKDYGPLTIAVQTQMQVELALTVGHNSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYR 256
P PKVDSSVV ++P + V V+ ++ ++ICF ++ KTL++ LKN++ +K
Sbjct: 206 PAPKVDSSVVVLKPLAEKVDVGDVKHFNRIVKICFAQRRKTLNN--NLKNLVQDADKRAE 263
Query: 257 TLQAL 261
++ L
Sbjct: 264 IIEKL 268
>gi|409418305|ref|ZP_11258303.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. HYS]
Length = 268
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 123/230 (53%), Gaps = 16/230 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K+ + +LEIGPG G LT LL +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSIHAKAGERMLEIGPGQGALTSGLLASGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKL 141
+V L ++F + ++ QGD LK D P V N+PY IS+PL F L
Sbjct: 67 KDLVPILNQQFAG---RDNFRLHQGDALKFDFTSLGAAPNSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LANAELIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
VDS++VR+ P + P P + + +R F ++ KTL + LK +LS
Sbjct: 184 VDSAIVRLVPHETLPFPAKDHRLLERIVREAFNQRRKTLRNT--LKALLS 231
>gi|448546326|ref|ZP_21626490.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax sp. ATCC BAA-646]
gi|448548313|ref|ZP_21627580.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax sp. ATCC BAA-645]
gi|448557507|ref|ZP_21632696.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax sp. ATCC BAA-644]
gi|445702779|gb|ELZ54719.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax sp. ATCC BAA-646]
gi|445714064|gb|ELZ65831.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax sp. ATCC BAA-644]
gi|445714408|gb|ELZ66170.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax sp. ATCC BAA-645]
Length = 287
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 110/202 (54%), Gaps = 4/202 (1%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIG G G LT +LL V VE D L+R F S+RL V++GD L DL
Sbjct: 59 VLEIGGGPGVLTDRLLGVADRVTVVEQDRTFAAHLRREFADEVESDRLTVVEGDALDVDL 118
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P F CV+N+PY ISS ++F+LL P + ++MFQKEF R+ A+ G Y RLSV+T
Sbjct: 119 PEFTACVSNLPYGISSEISFRLL---PRGKPLVLMFQKEFGERMAAEAGTSEYGRLSVST 175
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
Q + V V + F P P V S VVRI P +P +V + + F++ F ++ KT+
Sbjct: 176 QHYGEVELCEHVPREAFDPKPAVQSVVVRITPHEPEYEVDDEAFFLDFVKALFTQRRKTI 235
Query: 239 SSIFRLKNVLSMLEKNYRTLQA 260
+ R +S L ++A
Sbjct: 236 RNGIRNTAHISGLSDPEAVVEA 257
>gi|419955704|ref|ZP_14471828.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri TS44]
gi|387967509|gb|EIK51810.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri TS44]
Length = 262
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 117/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K+ + ++EIGPG G LT+ LL++G + VELD ++
Sbjct: 8 KRFGQNFLHDAGVIHRILRAIHPKAGERLVEIGPGQGALTEGLLDSGAHLDVVELDLDLI 67
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
LQ +F + + QGD LK D P V N+PY IS+PL F LL H
Sbjct: 68 PILQSKFAG---RDNFTLHQGDALKFDFSRLSQEPASLRIVGNLPYNISTPLIFHLLEHA 124
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A+PG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 125 GLIRDMHFMLQKEVVERLAAEPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 184
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 185 IVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLK 224
>gi|333373013|ref|ZP_08464932.1| dimethyladenosine transferase [Desmospora sp. 8437]
gi|332971060|gb|EGK10030.1| dimethyladenosine transferase [Desmospora sp. 8437]
Length = 294
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 133/233 (57%), Gaps = 21/233 (9%)
Query: 21 QGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL-LEAGK 79
Q L G+ KS GQH L + +++ +++ AG+ +LEIGPG G LT++L +EAG+
Sbjct: 15 QLLAERGLRLKKSLGQHFLTDRRILDKMMEAAGLGPEAGVLEIGPGIGALTERLAVEAGQ 74
Query: 80 MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDIC-----VANI 129
V+AVELD R++ L F P+ ++++QGDV+ DL + C VAN+
Sbjct: 75 -VVAVELDERLIPVLSSLFSDQPH---VRIVQGDVMSLDLSRLLQDHLGDCSRISVVANL 130
Query: 130 PYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLL 189
PY +++P+ +LL + +IM QKE A RL A PG K Y ++V T+ +A +
Sbjct: 131 PYYVTTPILMRLLEEKLPLDRIVIMIQKEVAERLTASPGSKAYGSITVATRYYAETEWVT 190
Query: 190 KVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL----RICFIRKNKTL 238
KV + F P P+VDS+V+R++ R+ RP V V + L R F ++ KTL
Sbjct: 191 KVPAHVFVPRPQVDSAVIRLKIRQ-RPPVE-VRDEALLFRVIRAAFGQRRKTL 241
>gi|429334667|ref|ZP_19215321.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas putida CSV86]
gi|428760738|gb|EKX82998.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas putida CSV86]
Length = 268
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K+ + ILEIGPG G LT+ +L +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGVIDRILRAINAKAGEHILEIGPGQGALTEGVLGSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L ++F S + ++ QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAS---RDNFRLHQGDALKFDFTTLGAAPRSLRVVGNLPYNISTPLIFHLLDNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 ELIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + +R F ++ KTL + +
Sbjct: 188 IVRLVPHETLPFPAKDHRLLERIVREAFNQRRKTLRNTLK 227
>gi|375086372|ref|ZP_09732784.1| dimethyladenosine transferase [Megamonas funiformis YIT 11815]
gi|374565409|gb|EHR36678.1| dimethyladenosine transferase [Megamonas funiformis YIT 11815]
Length = 287
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 122/226 (53%), Gaps = 14/226 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI K GQ+ L + +V+ IV A ++ D +LEIGPG G LT+ L E G V VEL
Sbjct: 20 GIHMSKRLGQNFLIDANIVQGIVDAANVQENDRVLEIGPGIGTLTQALAETGAEVTCVEL 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSPLTFK 140
D R+ L + Y N ++VIQGD+LK ++P F + VAN+PY I++P+
Sbjct: 80 DKRLPEVLAHTLDA--YDN-VRVIQGDILKVNIPEIMGDKPFKV-VANLPYYITTPIIMA 135
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL ++M QKE A R+ AQPG K Y LSV Q + L V +F PPP
Sbjct: 136 LLEKHLPITDIVVMVQKEVAERMAAQPGGKTYGALSVAVQYYTVPEIALYVPPRSFMPPP 195
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
+VDS VV + R+ P V ++ F R+ F ++ KTL++ +
Sbjct: 196 EVDSVVVNCKVRQ-TPAVELIDEKMFFRVVKAAFGQRRKTLNNALK 240
>gi|291533505|emb|CBL06618.1| dimethyladenosine transferase [Megamonas hypermegale ART12/1]
Length = 287
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 122/226 (53%), Gaps = 14/226 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI K GQ+ L + +V+ IV A ++ D +LEIGPG G LT+ L E G V VEL
Sbjct: 20 GIHMSKRLGQNFLIDANIVQGIVDAANVQENDRVLEIGPGIGTLTQALAETGAEVTCVEL 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSPLTFK 140
D R+ L + Y N ++VIQGD+LK ++P F + VAN+PY I++P+
Sbjct: 80 DKRLPEVLAHTLDA--YDN-VRVIQGDILKVNIPEIMGDKPFKV-VANLPYYITTPIIMA 135
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL ++M QKE A R+ AQPG K Y LSV Q + L V +F PPP
Sbjct: 136 LLEKHLPITDIVVMVQKEVAERMAAQPGGKTYGALSVAVQYYTVPEIALYVPPRSFMPPP 195
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
+VDS VV + R+ P V ++ F R+ F ++ KTL++ +
Sbjct: 196 EVDSVVVNCKVRQ-TPAVELIDEKMFFRVVKAAFGQRRKTLNNALK 240
>gi|307152257|ref|YP_003887641.1| dimethyladenosine transferase [Cyanothece sp. PCC 7822]
gi|306982485|gb|ADN14366.1| dimethyladenosine transferase [Cyanothece sp. PCC 7822]
Length = 279
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 125/225 (55%), Gaps = 19/225 (8%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K QH L++ + I+Q A +K+TD +LEIGPGTG LT++LL + V+AVE+D +
Sbjct: 7 KRFAQHWLRSEQALSEIIQAAQLKNTDRLLEIGPGTGILTRRLLPEVESVVAVEIDRDLC 66
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL-----PY-----FDICVANIPYQISSPLTFKL 141
+L +S + ++QGD+L DL P+ F+ VANIPY I+ P+ L
Sbjct: 67 KKL---VKSLGQLDNFLLLQGDILSLDLTTELAPFPKFTPFNKVVANIPYNITGPILEYL 123
Query: 142 L--FHQPA---FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
L +P + +++ QKE A RL A+PG K Y LS+ Q A + +V F
Sbjct: 124 LGTISEPGHQKYELIVLLMQKEVAERLTAKPGTKAYSALSIRVQYLAACEWICEVPARAF 183
Query: 197 RPPPKVDSSVVRIEP-RKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
PPPKVDS+VVR+ P R RP NP + D +++ F + K L +
Sbjct: 184 YPPPKVDSAVVRLRPQRVARPANNPRQLDTLVKLGFANRRKMLHN 228
>gi|300864419|ref|ZP_07109290.1| dimethyladenosine transferase [Oscillatoria sp. PCC 6506]
gi|300337563|emb|CBN54438.1| dimethyladenosine transferase [Oscillatoria sp. PCC 6506]
Length = 281
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 130/243 (53%), Gaps = 24/243 (9%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K QH LK+ + IV+ A + S D +LEIGPGTG LT+ LL A + V+AVE+D +
Sbjct: 7 RKRFAQHWLKSEKALNQIVKAADL-SQDRVLEIGPGTGILTRSLLPAAQSVVAVEIDRDL 65
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFK 140
+L ++ + ++QGD+L DL P F + VANIPY I+ P+ K
Sbjct: 66 CEKLAKQLGKV---DNFLLVQGDILAMDLEEQLAAFPKFQNPNKVVANIPYNITGPIIEK 122
Query: 141 LL--FHQPA---FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL PA F +++ QKE A RL A+PG + + LSV Q A + V
Sbjct: 123 LLGKISAPAAKPFDLIVLLVQKEVAERLYAKPGSRAFGALSVRVQYLAECELICDVPAKA 182
Query: 196 FRPPPKVDSSVVRIEPRKPRPQ-VNPVEWDGFLRICFIRKNKTLSS----IFRLKNVLSM 250
F PPPKVDS+VVR+ PR PQ +NPV + +++ F K K L + L+ + +
Sbjct: 183 FYPPPKVDSAVVRLRPRMVEPQAINPVHLESLIKLGFGSKRKMLRNNLKGTIELERLAQL 242
Query: 251 LEK 253
LEK
Sbjct: 243 LEK 245
>gi|222152162|ref|YP_002561322.1| dimethyladenosine transferase [Macrococcus caseolyticus JCSC5402]
gi|254807873|sp|B9E8V8.1|RSMA_MACCJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|222121291|dbj|BAH18626.1| dimethyladenosine transferase [Macrococcus caseolyticus JCSC5402]
Length = 296
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 140/261 (53%), Gaps = 26/261 (9%)
Query: 21 QGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKM 80
Q L G F KS GQ+ L + ++ +I++ AGI T ++EIGPG G+LT++L + K
Sbjct: 14 QLLDQYGFKFKKSLGQNFLVDTNVIRNIIEAAGIDKTSGVIEIGPGMGSLTEQLAKHAKQ 73
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDIC-----VANIP 130
V+A E+D R++ L +PY N + VI D+LK D+ Y C VAN+P
Sbjct: 74 VLAFEIDQRLIPILGETL--SPYDN-VTVINEDILKADVASAIETYLHHCDEIFVVANLP 130
Query: 131 YQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLK 190
Y I++P+ LL ++M QKE RL A P K Y LS+ Q + V ++
Sbjct: 131 YYITTPILMGLLEKNLNINSYVVMMQKEVGERLSAIPSTKAYGSLSIAVQYYTDVKRIMV 190
Query: 191 VGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFRLKNV 247
V K F PPP VDS VV++ + RP+V+ + + F ++ F+++ KT+ L N
Sbjct: 191 VPKGVFMPPPNVDSLVVKLTTLE-RPRVDVEDENLFFKLTRGAFVQRRKTI-----LNNY 244
Query: 248 LSML----EKNYRTLQALQSS 264
+S++ E R ++ L++S
Sbjct: 245 MSLIQDSKEHKSRIIEWLEAS 265
>gi|418294118|ref|ZP_12906019.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379065502|gb|EHY78245.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 264
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K + ++EIGPG G LT+ LL++G + VELD ++
Sbjct: 10 KRFGQNFLHDAGVIHRILRAIHAKPGERLVEIGPGQGALTEGLLDSGAHLDVVELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F + + QGD LK D + V N+PY IS+PL F LL H
Sbjct: 70 PILQGKFAE---RDNFNLHQGDALKFDFSRLSVEPNSLRIVGNLPYNISTPLIFHLLDHA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 127 HLIRDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLK 226
>gi|126657589|ref|ZP_01728744.1| dimethyladenosine transferase [Cyanothece sp. CCY0110]
gi|126621045|gb|EAZ91759.1| dimethyladenosine transferase [Cyanothece sp. CCY0110]
Length = 270
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 138/246 (56%), Gaps = 30/246 (12%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K QH L++ +E I+Q A +K++D +LEIGPGTG LT++LL + +IAVELD +
Sbjct: 5 RKRFAQHWLRSETALEQIIQAANLKNSDRLLEIGPGTGILTRRLLPLVQSLIAVELDWDL 64
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFK 140
++ +S + ++QGD+LK D+ P F + VANIPY I+SP+ K
Sbjct: 65 C---KKLVKSLGNEDNFLLLQGDILKLDIATEAEQFPKFLPINKVVANIPYNITSPILEK 121
Query: 141 LLFH-----QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL + P + +++ QKE A R+VA PG K Y LS+ Q A +++ V K +
Sbjct: 122 LLGNIASPENPPYDLIVLLIQKEVAQRIVASPGSKNYGALSIKMQYLADCNYICDVPKKS 181
Query: 196 FRPPPKVDSSVVRIEPRKPRP----QVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
F PPPKVDS+V+ +PRP +NP + + + + F + K L + N+ S++
Sbjct: 182 FYPPPKVDSAVITF---RPRPLLNSAINPKQLETLINLGFSSRRKMLRN-----NLQSLI 233
Query: 252 EKNYRT 257
+++ T
Sbjct: 234 DRDLLT 239
>gi|392377604|ref|YP_004984763.1| dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Azospirillum
brasilense Sp245]
gi|356879085|emb|CCC99983.1| dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Azospirillum
brasilense Sp245]
Length = 288
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 122/234 (52%), Gaps = 14/234 (5%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAVE 85
G+ K+ GQ+ L + L I + AG + ++EIGPG G LT+ LL K VIA+E
Sbjct: 31 GLDARKALGQNFLLDLNLTGRIARSAGDMTGVTVVEIGPGPGGLTRALLATKAKQVIAIE 90
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD----LPYFDICVANIPYQISSPLTFKL 141
D R + LQ Q+ RL +++GD L+ D P + VAN+PY +++PL
Sbjct: 91 RDHRFIEALQDVIQAA--DGRLSIVEGDALEVDPIQIAPAPRVIVANLPYNVATPLLIGW 148
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L F +MFQKE A RLVA+PG K Y RLSV TQ + L + F PPPK
Sbjct: 149 LGRIEEFVSLTLMFQKEVADRLVAKPGSKAYGRLSVITQWRSDARVLFNLPAKAFTPPPK 208
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL-SSIFRLKNVLSML 251
V+S++V + PR P EW ++ F ++ K L S+ L N ++L
Sbjct: 209 VESTIVHLTPRA---NPEPAEWKALEQVTAAAFGQRRKMLRQSLKSLGNAEALL 259
>gi|385813043|ref|YP_005849436.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
helveticus H10]
gi|323465762|gb|ADX69449.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
helveticus H10]
Length = 294
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ A I + D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P +R K++ DVLK + +FD+ VAN+PY I++P+
Sbjct: 86 EILQNELPKKIGDAPLEDRFKLMLKDVLKANFKEDLAGFFDMSKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL A+PG K Y L+++ Q V L+V N+F
Sbjct: 146 IFALAESDLHFASLTLMMQKEVAERLEAKPGSKEYGPLTISVQTEMDVKVALEVKHNSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P PKVDSSVV + P K +P++ N + +++CF ++ KTL++
Sbjct: 206 PRPKVDSSVVVLTPLKNKPEIENRKHFVWVVKMCFSQRRKTLNN 249
>gi|257076452|ref|ZP_05570813.1| dimethyladenosine transferase [Ferroplasma acidarmanus fer1]
Length = 239
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 117/214 (54%), Gaps = 4/214 (1%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
++F K GQ L + + V+ GI+ D +LEIGPG G LT LL + A+E D
Sbjct: 3 VNFAKKYGQVFLNDKNIAAKEVRLLGIEPGDHVLEIGPGHGILTGILLSEPVKLTAIEPD 62
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPA 147
R L+ + S + +I+ L T+ YFD + NIPY ISSP+ FK+L
Sbjct: 63 HRFYESLKISYHDHIVSGKFNIIKESFLDTEPSYFDHIIGNIPYNISSPVLFKIL--DFN 120
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
F+ +I+M QKEFA RLVA+PG K Y R+++NT + + + L V + F P P VDS+V+
Sbjct: 121 FKSSILMVQKEFARRLVARPGTKEYSRITINTSVRSTIKILFNVTRKVFSPVPDVDSAVI 180
Query: 208 RIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSI 241
I K ++ +D F+ F + K LS+I
Sbjct: 181 SI--MKKDVDIDLANFDKFIAKIFSMRRKKLSTI 212
>gi|422642714|ref|ZP_16706130.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae Cit 7]
gi|330955094|gb|EGH55354.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae Cit 7]
Length = 268
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL++G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLDSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F + P N + QGD LK D P N+PY IS+PL F LL +
Sbjct: 71 PILNGQFANKPNFN---LHQGDALKFDFNTLGAEPRSLRVGGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPYETLPHPAKDHHVLERIVREAFNQRRKTLRNTLKL 228
>gi|373859308|ref|ZP_09602038.1| dimethyladenosine transferase [Bacillus sp. 1NLA3E]
gi|372450977|gb|EHP24458.1| dimethyladenosine transferase [Bacillus sp. 1NLA3E]
Length = 293
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 136/255 (53%), Gaps = 26/255 (10%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L +P +++ IV A I +EIGPG G LT++L + K V+A E+
Sbjct: 19 GFSFKKSLGQNFLIDPNILKRIVDHAEITEETGTIEIGPGIGALTEQLARSSKKVVAFEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF------DI----CVANIPYQISSP 136
D R++ L PYSN ++VI DVLK D+ DI VAN+PY +++P
Sbjct: 79 DQRLLPILNETLD--PYSN-VEVIHQDVLKADVKTVMEDRLSDIKDVMVVANLPYYVTTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + R ++M QKE A R+ A PG K Y LS+ Q + + ++ V K F
Sbjct: 136 IIMKLLEEKLPIRGIVVMLQKEVAERITANPGTKDYGSLSIAVQYYTKAEIVMTVPKTVF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFRLKNVLSML-- 251
P P VDS+V+R+ R+ P V ++ F R+ F ++ KT+ L N+ S L
Sbjct: 196 VPQPNVDSAVIRLTVRE-NPPVTMIDEAFFFRVIKMSFAQRRKTI-----LNNLTSQLPN 249
Query: 252 --EKNYRTLQALQSS 264
EK + AL+ +
Sbjct: 250 GKEKKESIVLALEQA 264
>gi|448565341|ref|ZP_21636208.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax prahovense DSM 18310]
gi|445715085|gb|ELZ66841.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax prahovense DSM 18310]
Length = 287
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 110/202 (54%), Gaps = 4/202 (1%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIG G G LT +LL V VE D L+R F + RL V++GD L+ DL
Sbjct: 59 VLEIGGGPGVLTDRLLGVADRVTVVEQDRTFAEHLRREFADEVEAGRLTVVEGDALEVDL 118
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P F CV+N+PY ISS ++F+LL P + ++MFQKEF R+ A+ G Y RLSV+T
Sbjct: 119 PEFTACVSNLPYGISSEISFRLL---PRGKPLVLMFQKEFGERMAAESGTSEYGRLSVST 175
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
Q + V V + F P P V S VVRI PR P +V + + F++ F ++ KT+
Sbjct: 176 QHYGDVEVCEHVPREAFDPKPAVQSVVVRITPRDPEYEVEDEAFFLDFVKALFTQRRKTI 235
Query: 239 SSIFRLKNVLSMLEKNYRTLQA 260
+ R +S L ++A
Sbjct: 236 RNGIRNTAHISGLSDPEAVVEA 257
>gi|257388711|ref|YP_003178484.1| dimethyladenosine transferase [Halomicrobium mukohataei DSM 12286]
gi|257171018|gb|ACV48777.1| dimethyladenosine transferase [Halomicrobium mukohataei DSM 12286]
Length = 290
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 4/209 (1%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + +++ I A +LE+G G G LT +LL V A+E D L+
Sbjct: 34 QHFLIDDRVLDRIPGYADQMDRSHVLEVGAGPGALTDRLLAVADRVTAIERDPDFAAHLR 93
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
F ++RL +++GD L DLP F V+N+PY SS + F+LL P + ++MF
Sbjct: 94 EEFADAIDADRLTIVEGDALDVDLPEFSASVSNLPYGASSEIAFRLL---PRGKPLVLMF 150
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q+EFA R+ A PG Y RLSV +A V + V F P P+VDS++VR+ PR+P
Sbjct: 151 QQEFAERMAADPGSDDYGRLSVTAGHYADVEIVETVPPTAFDPQPRVDSAIVRLRPREPD 210
Query: 216 PQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
V + + FL+ F ++ KT+ + R
Sbjct: 211 YSVPDDDFFMDFLKGVFTQRRKTMRNAVR 239
>gi|448739715|ref|ZP_21721727.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus thailandensis JCM 13552]
gi|445799334|gb|EMA49715.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus thailandensis JCM 13552]
Length = 293
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 126/238 (52%), Gaps = 3/238 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G+ + QH L + +++ + T +LEIG GTG LT +LL+ + V
Sbjct: 24 LARAGVRADTDQDQHFLVDDRVLDRLASHTTELDTSHVLEIGAGTGALTARLLDRAERVT 83
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
AVE DSR+ L+ F + RL V++GD L DLP F ++N+PY ISS + F+LL
Sbjct: 84 AVERDSRLAAFLREEFADAVAAGRLTVVEGDALAVDLPDFTASLSNLPYGISSEVLFRLL 143
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
P R ++ Q+EFA R+VA P + Y RLSV +A + V F PPP V
Sbjct: 144 ---PRKRPLVVTVQREFAERMVAAPNTEDYGRLSVTAGHYADCEIVETVPPAAFSPPPAV 200
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
+S+VVR PR+P V + F+R F ++ KTL + R ++ +E+ ++A
Sbjct: 201 ESAVVRTTPREPDYSVPEEPFLAFVRGVFTQRRKTLRNAIRNTGHITGIERPEAVVEA 258
>gi|443322232|ref|ZP_21051259.1| dimethyladenosine transferase [Gloeocapsa sp. PCC 73106]
gi|442788022|gb|ELR97728.1| dimethyladenosine transferase [Gloeocapsa sp. PCC 73106]
Length = 265
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 123/217 (56%), Gaps = 14/217 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQH LK+ ++ I+ A + D +LEIGPGTG LT++L+E+ ++AVE+D +
Sbjct: 7 KRFGQHWLKSEAILNQIIAAARLCQDDAVLEIGPGTGILTRRLVESVSSLVAVEIDRDLC 66
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL---PYFDICVANIPYQISSPLTFKLL--FHQP 146
++L++ +I+ D+L+ DL P+ + VANIPY I+ P+ KLL P
Sbjct: 67 IKLRKLLGD---RENFSLIEADILQLDLNNYPHLNKVVANIPYNITGPILEKLLGTITNP 123
Query: 147 A---FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
++ +++ QKE A RLVAQPG K + LSV Q A + +V F+PPPKVD
Sbjct: 124 TGQNYQLIVLLIQKEVADRLVAQPGSKTFGALSVRIQYLADCQLVCRVPAKAFQPPPKVD 183
Query: 204 SSVVRIEPRKPRPQV--NPVEWDGFLRICFIRKNKTL 238
S+VV + PR P P V NP L++ F + K L
Sbjct: 184 SAVVSLSPR-PFPIVANNPKHLGTILQLGFANRRKML 219
>gi|134045845|ref|YP_001097331.1| dimethyladenosine transferase [Methanococcus maripaludis C5]
gi|166221675|sp|A4FY32.1|RSMA_METM5 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|132663470|gb|ABO35116.1| dimethyladenosine transferase [Methanococcus maripaludis C5]
Length = 263
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 14/213 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K GQ LK+ V+ + +A I + DV+LE+G G G LTK+L + K V +ELD R+
Sbjct: 5 KKLGQCFLKDKNFVKKAINRAEITNKDVVLELGLGEGALTKELAKIAKKVYVIELDERLK 64
Query: 91 --VLELQRRFQSTPYSNRLKVIQGDVLKTDLPY--FDICVANIPYQISSPLTFKLLFHQP 146
E+ F++ +++I D LK DL F+ VAN+PYQISSP+TFK L
Sbjct: 65 PFADEITSEFEN------VEIIWSDALKVDLKNLGFNKIVANLPYQISSPITFKFL--DV 116
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F A++M+Q EFA R+ +P K Y RLSV Q +A V + KV + F P P V+S++
Sbjct: 117 DFETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNSAI 176
Query: 207 VRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTL 238
V++ R+P+ V + + L+ F +N+T+
Sbjct: 177 VKLTKREPKYFVKDEKFFKKVLKAMFQHRNRTI 209
>gi|302388630|ref|YP_003824451.1| dimethyladenosine transferase [Thermosediminibacter oceani DSM
16646]
gi|302199258|gb|ADL06828.1| dimethyladenosine transferase [Thermosediminibacter oceani DSM
16646]
Length = 282
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 115/191 (60%), Gaps = 11/191 (5%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI K GQH L + + +++ A + +D +LEIGPG G LT +L K V+AVE
Sbjct: 11 GIRPSKRLGQHFLIDEAPLYKMLEAARLNESDEVLEIGPGLGVLTLELCRRAKKVVAVEK 70
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD---ICVANIPYQISSPLT 138
D ++ L++ +S N + +++ DVLK D+ YFD VAN+PY I+SP+
Sbjct: 71 DPNLIPVLEKLTKSY---NNICLLREDVLKLDMEKLWREYFDGKFKVVANLPYYITSPVI 127
Query: 139 FKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
K++ ++ A+IM QKE A RLVA PG+K Y LSV QL+A V + VG++ F P
Sbjct: 128 MKIINNRHLIEMAVIMIQKEVAHRLVAAPGNKDYGILSVAVQLYADVDLVCHVGRSAFLP 187
Query: 199 PPKVDSSVVRI 209
PPKVDS+VVR+
Sbjct: 188 PPKVDSAVVRL 198
>gi|448583291|ref|ZP_21646647.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax gibbonsii ATCC 33959]
gi|445729520|gb|ELZ81115.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax gibbonsii ATCC 33959]
Length = 287
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 110/202 (54%), Gaps = 4/202 (1%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIG G G LT +LL V VE D L+R F + RL V++GD L+ DL
Sbjct: 59 VLEIGGGPGVLTDRLLGVADRVTVVEQDRTFAEHLRREFADEVEAGRLTVVEGDALEVDL 118
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P F CV+N+PY ISS ++F+LL P + ++MFQKEF R+ A+ G Y RLSV+T
Sbjct: 119 PEFTACVSNLPYGISSEISFRLL---PRGKPLVLMFQKEFGERMAAEAGTSEYGRLSVST 175
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
Q + V V + F P P V S VVRI PR P +V + + F++ F ++ KT+
Sbjct: 176 QHYGDVEVCEHVPREAFDPKPAVQSVVVRITPRDPEYEVEDEAFFLDFVKALFTQRRKTI 235
Query: 239 SSIFRLKNVLSMLEKNYRTLQA 260
+ R +S L ++A
Sbjct: 236 RNGIRNTAHISGLSDPEAVVEA 257
>gi|440737963|ref|ZP_20917513.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fluorescens BRIP34879]
gi|440381538|gb|ELQ18065.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas fluorescens BRIP34879]
Length = 270
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAGNTNFN---LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKALLSNAE 234
>gi|150399067|ref|YP_001322834.1| dimethyladenosine transferase [Methanococcus vannielii SB]
gi|340624307|ref|YP_004742760.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Methanococcus
maripaludis X1]
gi|166221678|sp|A6UP00.1|RSMA_METVS RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|150011770|gb|ABR54222.1| dimethyladenosine transferase [Methanococcus vannielii SB]
gi|339904575|gb|AEK20017.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Methanococcus maripaludis X1]
Length = 267
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 120/217 (55%), Gaps = 22/217 (10%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ LK+ V+ ++ A I D++LE+G G G LTK+L + K V +ELD R+
Sbjct: 5 KKLGQCFLKDKNFVKKAIKSADITENDIVLEVGLGEGALTKELAKLAKFVYVIELDMRL- 63
Query: 92 LELQRRFQSTPYSNRL-------KVIQGDVLKTDLPY--FDICVANIPYQISSPLTFKLL 142
P++N++ KVI D LK DL F+ VAN+PYQISSP+TFK L
Sbjct: 64 ---------EPFANQIMSEFKNVKVIWNDALKVDLKELGFNKIVANLPYQISSPITFKFL 114
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F A++M+Q EFA R++ +P Y RLSV+ Q ++ V + KV F P P V
Sbjct: 115 --ENDFDVAVLMYQYEFAKRMIGKPDTDEYSRLSVSIQYNSDVEFICKVPPTAFSPKPDV 172
Query: 203 DSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTL 238
+S++V++ R+P + E + L F +N+T+
Sbjct: 173 NSAIVKLTKREPLFHIENEEFFRNVLNAIFQHRNRTV 209
>gi|428218642|ref|YP_007103107.1| ribosomal RNA small subunit methyltransferase A [Pseudanabaena sp.
PCC 7367]
gi|427990424|gb|AFY70679.1| Ribosomal RNA small subunit methyltransferase A [Pseudanabaena sp.
PCC 7367]
Length = 278
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 129/229 (56%), Gaps = 14/229 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K QH L + ++ IV A + S D +LEIGPGTGNLT+ LL + +IAVE+D +
Sbjct: 6 KRFAQHWLNSLDILYKIVAAADLHSDDCVLEIGPGTGNLTEMLLPWVRSLIAVEIDRDLC 65
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYF-DICVANIPYQISSPLTFKLL--FHQPA- 147
+L+R+F+ + + ++I+ D+L+ LP + VANIPY I+SP+ +L+ QP
Sbjct: 66 RQLRRKFK---HKDNFELIEADLLQMPLPETPNKVVANIPYNITSPILHRLMGKIAQPVG 122
Query: 148 -FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F +++ QKE RL A PG K Y LS+ TQ A ++ V F PPPKV S+V
Sbjct: 123 QFDRIVLLVQKEIGDRLTANPGTKAYNALSIRTQYLADCEYICDVPPKAFTPPPKVSSAV 182
Query: 207 VRIEPRKP-RPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN 254
V I PR P + NP D + + F + K L + N+ S++E++
Sbjct: 183 VSIMPRSPLQAAQNPKLMDTLISLGFATRRKMLHN-----NLGSVIERD 226
>gi|194336270|ref|YP_002018064.1| dimethyladenosine transferase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308747|gb|ACF43447.1| dimethyladenosine transferase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 262
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 119/216 (55%), Gaps = 11/216 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I+ K GQ+ L + + IV +G D ILEIGPG G LT+ ++E + VE D
Sbjct: 12 IAVKKKLGQNFLTDRNITRKIVIASGATPQDNILEIGPGFGALTRAIMEFCPLFTVVEKD 71
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----CVANIPYQISSPLTFKLL 142
++ F + Y +L +I+GD L+TDL + NIPY I++P+ FKLL
Sbjct: 72 HKLA-----DFIRSEYP-QLNLIEGDFLETDLAALAHDKPLKILGNIPYSITTPILFKLL 125
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H+ F A +M Q E AMR+VA P K Y L+V Q V++L KVG+ FRP P V
Sbjct: 126 EHRHTFFSATLMMQHEVAMRIVAHPSTKDYGILAVQMQAFCDVNYLFKVGRKVFRPQPGV 185
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
DS+V+++ P+ P + + F+RI F ++ KTL
Sbjct: 186 DSAVLQMTPKNNVPLNDADGFRRFVRIAFHQRRKTL 221
>gi|300362465|ref|ZP_07058641.1| dimethyladenosine transferase [Lactobacillus gasseri JV-V03]
gi|300353456|gb|EFJ69328.1| dimethyladenosine transferase [Lactobacillus gasseri JV-V03]
Length = 296
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 128/224 (57%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + ++ IV+ A I+ D ++EIGPG G+LT++LL AG V+A E+D +
Sbjct: 26 KNLGQNFLVDLAAIKGIVEAADIQPGDQVIEIGPGIGSLTEQLLLAGAKVLAYEVDQDLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ SNR K++ DVLK + + D+ VAN+PY I++P+
Sbjct: 86 EILKNELPQKVAGEELSNRFKLVMKDVLKANFTKDSDGFLDLNKSVKIVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L+ AF +M QKE A RLVA+P K Y L++ Q V +V +F
Sbjct: 146 IFNLIKSNLAFSSLTLMMQKEVAERLVAKPKTKEYGPLTIAVQSRMNVKLAEEVKSTSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P +P ++ +D +++CF ++ KTL++
Sbjct: 206 PRPKVDSAVVVLTPLTEKPDIDDYSFFDHVVKMCFAQRRKTLAN 249
>gi|145219843|ref|YP_001130552.1| dimethyladenosine transferase [Chlorobium phaeovibrioides DSM 265]
gi|145206007|gb|ABP37050.1| dimethyladenosine transferase [Chlorobium phaeovibrioides DSM 265]
Length = 270
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 123/238 (51%), Gaps = 11/238 (4%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I+ K GQ+ L + + IV +G T+ ILEIGPG G LTK++ AVE D
Sbjct: 10 IAVKKKLGQNFLTDSNITRKIVAASGALPTERILEIGPGFGALTKEISALTPHFTAVEKD 69
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----CVANIPYQISSPLTFKLL 142
+ ++R + S L++I+ D L DL + NIPY I++P+ FKLL
Sbjct: 70 RALAAFIRREYPS------LQMIEADFLDLDLEELSTDGPLRVLGNIPYSITTPIIFKLL 123
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ A +M Q E A+RL A+P K Y L+V Q V +L KVG+ F+P P V
Sbjct: 124 EARHNILSATLMMQHEVALRLTAKPSTKEYGILAVQLQSFCTVRYLFKVGRKVFKPQPNV 183
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
DS+V+ + P+K P NP+ + F+R F ++ KTL + R LS L L+A
Sbjct: 184 DSAVISMTPKKESPVENPLAYRQFVRTAFHQRRKTLLNNLRDSYDLSSLTPETLKLRA 241
>gi|420145311|ref|ZP_14652781.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398403087|gb|EJN56362.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 296
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 130/251 (51%), Gaps = 20/251 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L A G++F KS GQ+ L P ++ I A + + D +LEIGPG G+LT++L + V+
Sbjct: 18 LAAYGLTFKKSLGQNFLTEPTILRQIASAAELTTADDVLEIGPGIGSLTEQLAQNAHQVL 77
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD-----ICVANIPYQ 132
A+E+D R++ L PY N + V+ DVLK+DL +FD VAN+PY
Sbjct: 78 ALEIDQRLLPILADTL--APYDN-VTVLNQDVLKSDLATLIRDHFDGQHKVKVVANLPYY 134
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ +LL AF ++M QKE A RL A PG K Y LSV Q V V
Sbjct: 135 ITTPILLRLLESGVAFDQIVVMMQKEVAERLAADPGSKAYGSLSVAVQYQMTVKLAFIVP 194
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVE--WDGFLRICFIRKNKTLSSIFRLKNVLSM 250
K F P P VDS++V + P V E + +R F ++ K+L N+ ++
Sbjct: 195 KTVFVPQPNVDSAIVSLTRHVTPPAVATDEKVFARLVRGSFAQRRKSL-----WNNLTAL 249
Query: 251 LEKNYRTLQAL 261
K+ T AL
Sbjct: 250 YGKDATTKAAL 260
>gi|398967697|ref|ZP_10682047.1| dimethyladenosine transferase [Pseudomonas sp. GM30]
gi|398144458|gb|EJM33290.1| dimethyladenosine transferase [Pseudomonas sp. GM30]
Length = 272
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 121/233 (51%), Gaps = 16/233 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + +++ I++ K D +LEIGPG G LT +L +G + VELD
Sbjct: 7 HKARKRFGQNFLHDAGVIDRILRSISAKPDDRMLEIGPGQGALTAGILNSGAQLDVVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
++ L ++F + + QGD LK D + V N+PY IS+PL F L
Sbjct: 67 KDLIPILNQQFAG---KSNFNLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLIFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R M QKE RL A PG + RLS+ Q H RV HL VG F PPPK
Sbjct: 124 LNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS++VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 184 VDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKQLLSNAE 234
>gi|423693908|ref|ZP_17668428.1| dimethyladenosine transferase [Pseudomonas fluorescens SS101]
gi|388001371|gb|EIK62700.1| dimethyladenosine transferase [Pseudomonas fluorescens SS101]
Length = 270
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAGKANFN---LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKALLSNAE 234
>gi|421619266|ref|ZP_16060227.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri KOS6]
gi|409778735|gb|EKN58421.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri KOS6]
Length = 264
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 116/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K + ++EIGPG G LT+ LL++G + VELD ++
Sbjct: 10 KRFGQNFLHDAGVIHRILRAIHAKPGERLVEIGPGQGALTEGLLDSGAHLDVVELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLK------TDLPYFDICVANIPYQISSPLTFKLLFHQ 145
LQ +F + QGD LK +D+P V N+PY IS+PL F LL H
Sbjct: 70 PILQSKFAG---RENFDLNQGDALKFDFSRLSDVPNSLRIVGNLPYNISTPLIFHLLDHA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 127 HLIRDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLK 226
>gi|434393089|ref|YP_007128036.1| dimethyladenosine transferase [Gloeocapsa sp. PCC 7428]
gi|428264930|gb|AFZ30876.1| dimethyladenosine transferase [Gloeocapsa sp. PCC 7428]
Length = 273
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 135/262 (51%), Gaps = 29/262 (11%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
QH LKN + IV A I D ILEIGPGTG LT++LL + V+AVE+D + L
Sbjct: 9 AQHWLKNEKALNQIVAAAEITKRDRILEIGPGTGVLTRRLLPLAESVVAVEIDLDLCELL 68
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYF----------DICVANIPYQISSPLTFKLL-- 142
++ +T ++QGD L+ DLP + VANIPY I+ P+ KLL
Sbjct: 69 AKKLGNT---ENFLLLQGDFLELDLPSLLTSFPNFQSPNKVVANIPYNITGPILEKLLGT 125
Query: 143 ----FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
QP F +++ QKE A RL A+PG K + LSV Q A + V +F P
Sbjct: 126 IANPNPQP-FDLIVLLVQKEVADRLYAKPGSKTFGALSVRVQYLAECEFIYHVNAKSFYP 184
Query: 199 PPKVDSSVVRIEPRKPR-PQVNPVEWDGFLRICFIRKNKTLSSIF-------RLKNVLSM 250
PPKVDS+VVR+ PR+ + P +NP + +++ F K K L + RL +L
Sbjct: 185 PPKVDSAVVRLRPRQLQLPPLNPHHLETLVQLGFAAKRKMLRNNLKAIIERDRLTKLLEN 244
Query: 251 LEKNYRT-LQALQSSQNSSLGN 271
LE N + + L +Q SL N
Sbjct: 245 LEINPQARAEDLSVTQWISLSN 266
>gi|237803359|ref|ZP_04590944.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025340|gb|EGI05396.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 268
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 115/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ KS + +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKSEERLLEIGPGQGALTEGLLNSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F P + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PTLNSQFAGKP---NFSLHQGDALKFDFNSLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P + P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHETLPHQAKDHRVLERVVREAFNQRRKTLRNTLKL 228
>gi|448606013|ref|ZP_21658592.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax sulfurifontis ATCC BAA-897]
gi|445739430|gb|ELZ90937.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax sulfurifontis ATCC BAA-897]
Length = 287
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 110/202 (54%), Gaps = 4/202 (1%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+LEIG G G LT +LL V VE D L+R F S RL V++GD L DL
Sbjct: 59 VLEIGGGPGVLTDRLLGVADRVTVVEQDRTFADHLRREFADEVESGRLTVVEGDALDVDL 118
Query: 120 PYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNT 179
P F CV+N+PY ISS ++F+LL P + ++MFQKEF R+ A+ G Y RLSV+T
Sbjct: 119 PEFTACVSNLPYGISSEISFRLL---PRGKPLVLMFQKEFGERMAAEAGTSEYGRLSVST 175
Query: 180 QLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWD-GFLRICFIRKNKTL 238
Q + V V + F P P V S +VRI PR+P +V+ + F++ F ++ KT+
Sbjct: 176 QHYGDVEVCEHVPREAFAPKPAVQSVIVRITPREPDYEVDDEAFFLDFVKALFTQRRKTI 235
Query: 239 SSIFRLKNVLSMLEKNYRTLQA 260
+ R +S L ++A
Sbjct: 236 RNGIRNTAHISGLSDPEAVVEA 257
>gi|312963419|ref|ZP_07777901.1| dimethyladenosine transferase [Pseudomonas fluorescens WH6]
gi|311282225|gb|EFQ60824.1| dimethyladenosine transferase [Pseudomonas fluorescens WH6]
Length = 270
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAG---KSNFNLHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKALLSNAE 234
>gi|447918645|ref|YP_007399213.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas poae RE*1-1-14]
gi|445202508|gb|AGE27717.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas poae RE*1-1-14]
Length = 270
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F N + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAGKANFN---LHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKALLSNAE 234
>gi|260434330|ref|ZP_05788300.1| dimethyladenosine transferase [Synechococcus sp. WH 8109]
gi|260412204|gb|EEX05500.1| dimethyladenosine transferase [Synechococcus sp. WH 8109]
Length = 274
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 141/261 (54%), Gaps = 24/261 (9%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMV 81
+G G K GQH L++ +++ I++ A ++STD +LE+GPG G LT++LL AG K V
Sbjct: 1 MGFSGHHARKRFGQHWLRDESVLQRIIEAADLQSTDRVLEVGPGRGALTERLLAAGLKAV 60
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLK-----TDLPYFDICVANIPYQISSP 136
A+ELD +V LQ RF++ P + QGDVL+ +D D VANIPY I+ P
Sbjct: 61 HAIELDRDLVDGLQERFEAQPG---FSLHQGDVLEAPMELSDGRIADKVVANIPYNITGP 117
Query: 137 LTFKLLFH-----QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
L +L+ P ++ +++ QKE A R+ A+PG + LSV QL AR + V
Sbjct: 118 LLERLVGRLDRPVDPPYQRLVLLVQKEVAERIRARPGHSSFSALSVRMQLLARCRSVCPV 177
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNP---VEWDGFLRICFIRKNKTLSSIFRLKNVL 248
F+PPPKV S V+ +EP +V P + L+ F+ + K L+N L
Sbjct: 178 PPRCFQPPPKVQSEVICLEPLPASERVEPALAARVESLLKQAFLARRKM------LRNTL 231
Query: 249 SMLEKNYRTLQALQSSQNSSL 269
+ + + R L+ L +S SL
Sbjct: 232 AGVAEPDR-LKELAASAGFSL 251
>gi|448688952|ref|ZP_21694689.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula japonica DSM 6131]
gi|445778822|gb|EMA29764.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula japonica DSM 6131]
Length = 285
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 115/213 (53%), Gaps = 6/213 (2%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
+ QH L + +++ I + A D+ +LEIG G G LT +LL A + V AVE D +
Sbjct: 26 QDQHFLVDDRVLDRIPEYATDAGVDLSHVLEIGAGPGALTDRLLAAAEKVTAVERDPKFA 85
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+ F ++RL V++ D L DLP F ++N+PY SS + F+LL Q R
Sbjct: 86 AHLREEFAEEISADRLTVVEDDALDVDLPEFTASISNLPYGASSEIAFRLLPEQ---RPL 142
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++MFQ+EFA R+ A+P Y RLSV +A V + V F P P+V S++VR P
Sbjct: 143 LLMFQQEFAERMAAEPATDDYGRLSVTAGHYADVEIVETVPPEAFDPQPRVTSALVRTTP 202
Query: 212 RKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
R P V E + FL+ F ++ KT+ + R
Sbjct: 203 RTPDYTVPSDEFFMDFLKAVFTQRRKTMRNAVR 235
>gi|325569335|ref|ZP_08145491.1| dimethyladenosine transferase [Enterococcus casseliflavus ATCC
12755]
gi|325157335|gb|EGC69496.1| dimethyladenosine transferase [Enterococcus casseliflavus ATCC
12755]
Length = 295
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 122/230 (53%), Gaps = 18/230 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L P ++ IV+ AGI T ++E+GPG G LT++L + K V+
Sbjct: 17 LAKHGFTFKKSLGQNFLTEPNILRKIVETAGIDETTNVIEVGPGIGALTEQLAKQAKQVL 76
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP------YFDIC-----VANIPY 131
A E+D R++ L Q PY+N +K+I DVL+ DL + D VAN+PY
Sbjct: 77 AFEIDDRLIPVLADTMQ--PYAN-VKIIHQDVLQADLSTTIRSEFSDTAASLKVVANLPY 133
Query: 132 QISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
I++P+ L Q ++M QKE A R+ A PG K Y LS+ Q + V
Sbjct: 134 YITTPIMMHFLESQVPVDEMVVMMQKEVADRISAVPGTKAYGSLSIAVQYYMEAKLAFIV 193
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL 238
K F P P VDS+++++ R+P+P V + F ++ F + KTL
Sbjct: 194 PKTVFVPQPNVDSAILKLT-RRPQPAVAVTDEKEFFKLTKAAFQLRRKTL 242
>gi|387895972|ref|YP_006326269.1| dimethyladenosine transferase [Pseudomonas fluorescens A506]
gi|387162785|gb|AFJ57984.1| dimethyladenosine transferase [Pseudomonas fluorescens A506]
Length = 270
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAG---KSNFNLHQGDALKFDFNSLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNT--LKALLSNAE 234
>gi|448667316|ref|ZP_21685858.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula amylolytica JCM 13557]
gi|445770351|gb|EMA21415.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula amylolytica JCM 13557]
Length = 285
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 6/213 (2%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
+ QH L + +++ I + A D+ +LEIG G G LT +LL + V A+E D
Sbjct: 26 QDQHFLVDDRVLDRIPEYAMDADVDLSHVLEIGAGPGALTDRLLATAETVTAIERDPDFA 85
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+ F ++RL V++GD L+ DLP F ++N+PY SS + F+LL Q R
Sbjct: 86 AHLREEFTEEIAADRLAVVEGDALEVDLPDFTASISNLPYGASSEIAFRLLPEQ---RPL 142
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++MFQ+EFA R+ A P Y RLSV +A V + V F P P+V S++VR P
Sbjct: 143 LLMFQREFAERMAADPATDDYGRLSVTAGHYADVEIVETVPPEAFDPQPRVTSALVRTTP 202
Query: 212 RKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
R+P V E + FL+ F ++ KT+ + R
Sbjct: 203 RQPDYTVPSDEFFMDFLKAVFTQRRKTMRNAVR 235
>gi|15790240|ref|NP_280064.1| dimethyladenosine transferase [Halobacterium sp. NRC-1]
gi|169235969|ref|YP_001689169.1| dimethyladenosine transferase [Halobacterium salinarum R1]
gi|27151602|sp|Q9HQH1.1|RSMA_HALSA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|226732584|sp|B0R506.1|RSMA_HALS3 RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|10580702|gb|AAG19544.1| dimethyladenosine transferase [Halobacterium sp. NRC-1]
gi|167727035|emb|CAP13821.1| probable dimethyladenosine transferase [Halobacterium salinarum R1]
Length = 282
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 113/209 (54%), Gaps = 4/209 (1%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + +++ I A +LEIG GTG LT +LL V AVE D L+
Sbjct: 23 QHFLIDDRVLDRIPTYADGFDRGHVLEIGAGTGALTDRLLSVADRVTAVERDESYASFLR 82
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
F + L V+ GD L DLP F V+N+PY ++S +TF+LL PA + ++M+
Sbjct: 83 EEFADAIAAGDLDVVAGDALAVDLPAFTCAVSNLPYGVASEVTFRLL---PAGKPMVLMY 139
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q EFA R+ A PG Y RLSV TQ +A VS + V F P P+V+S+VVR+ PR P
Sbjct: 140 QLEFAERMAADPGTSEYGRLSVATQHYADVSIVETVPAAAFDPQPRVESAVVRVTPRDPD 199
Query: 216 PQV-NPVEWDGFLRICFIRKNKTLSSIFR 243
V + + F++ F ++ KT + R
Sbjct: 200 YVVADEAFFLSFVKALFTQRRKTTRNAIR 228
>gi|78189160|ref|YP_379498.1| dimethyladenosine transferase [Chlorobium chlorochromatii CaD3]
gi|119365013|sp|Q3ARC0.1|RSMA_CHLCH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78171359|gb|ABB28455.1| dimethyladenosine transferase [Chlorobium chlorochromatii CaD3]
Length = 263
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 129/239 (53%), Gaps = 12/239 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
++ K GQ+ L + + V +G K D ++EIGPG G LT++L+E + +E D
Sbjct: 11 VAAKKKLGQNFLTDRNITRKTVLLSGAKPDDQVVEIGPGFGALTRELVEECHNLTVIEKD 70
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKL 141
+ ++ + ++KVI+GDVL + + NIPY I+SP+ F L
Sbjct: 71 PTLATFIRNEYP------QIKVIEGDVLTINFSAMAQAGKPLQILGNIPYSITSPILFHL 124
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L H+ AFR A +M Q E A+RL A+P K Y L+V Q +V +L KV + F+P PK
Sbjct: 125 LEHRRAFRSATLMMQHEVALRLAAKPATKEYGILAVQMQAFCKVEYLFKVSRKVFKPQPK 184
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
V+S+V+++ P P ++ + F+RI F ++ KTL + + L +++ N L+A
Sbjct: 185 VESAVIKLTPHATDPALDADGFRRFVRIAFHQRRKTLLNNLKESYNLELVDSNKLQLRA 243
>gi|107099578|ref|ZP_01363496.1| hypothetical protein PaerPA_01000591 [Pseudomonas aeruginosa PACS2]
gi|254243686|ref|ZP_04937008.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
2192]
gi|386056662|ref|YP_005973184.1| dimethyladenosine transferase [Pseudomonas aeruginosa M18]
gi|451983550|ref|ZP_21931829.1| Dimethyladenosine transferase [Pseudomonas aeruginosa 18A]
gi|126197064|gb|EAZ61127.1| rRNA (adenine-N6,N6)-dimethyltransferase [Pseudomonas aeruginosa
2192]
gi|347302968|gb|AEO73082.1| dimethyladenosine transferase [Pseudomonas aeruginosa M18]
gi|451758789|emb|CCQ84352.1| Dimethyladenosine transferase [Pseudomonas aeruginosa 18A]
Length = 268
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRAIHAREGQRLLEIGPGQGALTEGLLGSGARLDVIELDQDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLFHQ 145
L+ +F +R + QGD LK D V N+PY IS+PL F LL +
Sbjct: 71 PLLKLKFG---LESRFSLHQGDALKFDFASLVESGEKLRVVGNLPYNISTPLIFHLLEYA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 PVIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEP--RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
+VR+ P P P +P + +R F ++ KTL + LK +LS+
Sbjct: 188 IVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNT--LKPLLSV 232
>gi|406027425|ref|YP_006726257.1| dimethyladenosine transferase [Lactobacillus buchneri CD034]
gi|405125914|gb|AFS00675.1| dimethyladenosine transferase [Lactobacillus buchneri CD034]
Length = 296
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 131/240 (54%), Gaps = 18/240 (7%)
Query: 13 QKSGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLT 71
Q + P + Q L +S KS GQ+ L + ++++IV A I D ++EIGPG G LT
Sbjct: 6 QIASPTRTQAILNRYHLSAKKSLGQNFLVDLGVLDNIVAAAKITKADNVIEIGPGIGGLT 65
Query: 72 KKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-- 124
++L +A V+A E+D+ ++ L PY N +++I D+LK +LP FD
Sbjct: 66 EQLAKAANKVVAFEIDANLLPVLDETL--APYDN-IEIINQDILKANLPKIIDDVFDTEK 122
Query: 125 ---CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
VAN+PY I++P+ L+ + F ++M QKE A RL A+P K Y LSV Q
Sbjct: 123 PLKVVANLPYYITTPIVMDLITGETQFDAIVVMMQKEVAERLNAEPSTKPYGSLSVIVQE 182
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVE---WDGFLRICFIRKNKTL 238
+V V K F P PKVDS++V++ PR R V P + + F+R CF+ + KTL
Sbjct: 183 LNQVEISFVVPKTAFIPQPKVDSAIVKLTPRVKR-AVEPFDQKAFISFVRGCFMHQRKTL 241
>gi|172037411|ref|YP_001803912.1| dimethyladenosine transferase [Cyanothece sp. ATCC 51142]
gi|354553707|ref|ZP_08973013.1| dimethyladenosine transferase [Cyanothece sp. ATCC 51472]
gi|254807863|sp|B1WRJ7.1|RSMA_CYAA5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|171698865|gb|ACB51846.1| rRNA dimethyladenosine transferase [Cyanothece sp. ATCC 51142]
gi|353554424|gb|EHC23814.1| dimethyladenosine transferase [Cyanothece sp. ATCC 51472]
Length = 270
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 133/243 (54%), Gaps = 24/243 (9%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K QH L++ +E I+Q A +K +D +LEIGPGTG LT++LL + +IAVELD +
Sbjct: 5 RKRFAQHWLRSETALEQIIQAANLKKSDRLLEIGPGTGILTRRLLPLVQSLIAVELDWDL 64
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFK 140
+L + + ++QGD+LK D+ P F + VANIPY I+SP+ K
Sbjct: 65 CKKLVKSLGD---EDNFLLLQGDILKLDIATEAQQFPKFLPINKVVANIPYNITSPILDK 121
Query: 141 LLFH-----QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL QP++ +++ QKE A R++A PG K Y LS+ Q A +++ V K +
Sbjct: 122 LLGRISSPKQPSYDLIVLLIQKEVAQRIIAYPGSKNYGALSIKMQYLADCNYICDVPKKS 181
Query: 196 FRPPPKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN 254
F PPPKVDS+V+ PR NP + + + F + K L + N+ S+++++
Sbjct: 182 FYPPPKVDSAVITFRPRSLLNSATNPKYLETLINLGFSSRRKMLRN-----NLQSLIDRD 236
Query: 255 YRT 257
T
Sbjct: 237 LLT 239
>gi|333396677|ref|ZP_08478492.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 296
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 130/251 (51%), Gaps = 20/251 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L A G++F KS GQ+ L P ++ I A + + D +LEIGPG G+LT++L + V+
Sbjct: 18 LAAYGLTFKKSLGQNFLTEPTILRQIASAAELTTADDVLEIGPGIGSLTEQLAQNAHQVL 77
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD-----ICVANIPYQ 132
A+E+D R++ L PY N + V+ DVLK+DL +FD VAN+PY
Sbjct: 78 ALEIDQRLLPILADTL--APYDN-VTVLNQDVLKSDLATLIREHFDGQHKVKVVANLPYY 134
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ +LL AF ++M QKE A RL A PG K Y LSV Q V V
Sbjct: 135 ITTPILLRLLESGVAFDQIVVMMQKEVAERLAAAPGSKAYGSLSVAVQYQMTVKLAFIVP 194
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVE--WDGFLRICFIRKNKTLSSIFRLKNVLSM 250
K F P P VDS++V + P V E + +R F ++ K+L N+ ++
Sbjct: 195 KTVFVPQPNVDSAIVSLTRHVTPPAVATDEKVFARLVRGSFAQRRKSL-----WNNLTAL 249
Query: 251 LEKNYRTLQAL 261
K+ T AL
Sbjct: 250 YGKDATTKAAL 260
>gi|421151678|ref|ZP_15611286.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 14886]
gi|404526878|gb|EKA37065.1| dimethyladenosine transferase [Pseudomonas aeruginosa ATCC 14886]
Length = 268
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ + +LEIGPG G LT+ LL +G + +ELD ++
Sbjct: 11 KRFGQNFLHDAGVIHRILRTIHAREGQRLLEIGPGQGALTEGLLGSGARLDVIELDQDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKLLFHQ 145
L+ +F +R + QGD LK D V N+PY IS+PL F LL +
Sbjct: 71 PLLKLKFG---LESRFSLHQGDALKFDFASLVESGEKLRVVGNLPYNISTPLIFHLLEYA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
P M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 PVIEDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEP--RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSM 250
+VR+ P P P +P + +R F ++ KTL + LK +LS+
Sbjct: 188 IVRLTPFAEPPHPARDPKLLERVVREAFNQRRKTLRNT--LKPLLSV 232
>gi|333902123|ref|YP_004475996.1| ribosomal RNA small subunit methyltransferase A [Pseudomonas fulva
12-X]
gi|333117388|gb|AEF23902.1| Ribosomal RNA small subunit methyltransferase A [Pseudomonas fulva
12-X]
Length = 270
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 120/237 (50%), Gaps = 19/237 (8%)
Query: 15 SGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
S PYQ + K GQ+ L + ++ I++ + + +LEIGPG G LT+ L
Sbjct: 2 SEPYQHRA--------RKRFGQNFLHDAGVIHRILRAIHAREGEHLLEIGPGQGALTEGL 53
Query: 75 LEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VAN 128
L +G + +ELD ++ LQ +F P R ++ QGD LK D V N
Sbjct: 54 LNSGAQLDVIELDLDLIPILQAKFADQP---RFRLNQGDALKFDFSSLQAAPNSLRVVGN 110
Query: 129 IPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL 188
+PY IS+PL F LL + R M QKE RL A PG + RLS+ Q H +V HL
Sbjct: 111 LPYNISTPLIFHLLDNAHLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCQVEHL 170
Query: 189 LKVGKNNFRPPPKVDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
VG F PPPKVDS++VR+ P + P P + + +R F ++ KTL + +
Sbjct: 171 FNVGPGAFNPPPKVDSAIVRLVPHQVLPHPAKDHRLLERVVREAFNQRRKTLRNTLK 227
>gi|398814647|ref|ZP_10573327.1| dimethyladenosine transferase [Brevibacillus sp. BC25]
gi|398036356|gb|EJL29572.1| dimethyladenosine transferase [Brevibacillus sp. BC25]
Length = 297
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 126/225 (56%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ +IV +A + +EIGPG G LT++L A K V+A+E+
Sbjct: 23 GFSFKKSLGQNFLIDTNILHNIVSEADLTKEKGAIEIGPGIGALTEQLGRAAKKVMAIEI 82
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD----------ICVANIPYQISSP 136
D R++ LQ +PY N ++V+ GDVL+ DL VAN+PY +++P
Sbjct: 83 DQRLLPILQDTL--SPYEN-IEVVHGDVLELDLKKLIEEKMTGVEKLSVVANLPYYVTTP 139
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + ++M QKE A R+ A+PG K Y LSV Q +A + V + F
Sbjct: 140 ILMKLLEERLPLENIVVMIQKEVAERIAAKPGTKDYGSLSVAAQFYADTEVAMIVPASVF 199
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTL 238
P P VDS+V+R++ R RP V+ + D F R+ F ++ KTL
Sbjct: 200 IPRPNVDSAVIRLKVRD-RPPVDVDDQDVFFRVVRSSFAQRRKTL 243
>gi|392953173|ref|ZP_10318727.1| hypothetical protein WQQ_27990 [Hydrocarboniphaga effusa AP103]
gi|391858688|gb|EIT69217.1| hypothetical protein WQQ_27990 [Hydrocarboniphaga effusa AP103]
Length = 262
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 133/254 (52%), Gaps = 20/254 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQH L +P +++ I++ + + I+EIGPG G LT LL+ + VELD ++
Sbjct: 8 KRFGQHFLHDPYVIDRILRSVNPRPGEAIIEIGPGPGALTAPLLKRVDKLTVVELDRDVI 67
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
L+ + S +L+++ D LK D V N+PY IS+PL F +L
Sbjct: 68 PHLR---AACGESEKLEIVMADALKVDYAALAPAGAPLRLVGNLPYNISTPLLFHVLSFA 124
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
+ M QKE R+ A P D Y RLSV A V HL VG F+PPPKV+S+
Sbjct: 125 GRVQDMHFMLQKEVVDRMCAGPDDDAYGRLSVALAARAEVVHLFDVGPGAFKPPPKVESA 184
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLS----SIFRLKNVLSM-LEKNYRT 257
VVR+ PR+P ++ +W F R+ F+++ KTLS + F ++ + ++ +R
Sbjct: 185 VVRLVPRRPDFEIR--DWAMFDRVVTAAFLQRRKTLSNSLRAYFTADDIRAAGIDPQWRA 242
Query: 258 LQALQSSQNSSLGN 271
+ L ++Q ++L N
Sbjct: 243 -ERLSAAQFATLAN 255
>gi|339449357|ref|ZP_08652913.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus fructivorans KCTC 3543]
Length = 296
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 126/222 (56%), Gaps = 21/222 (9%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KS GQ+ L + +++ IVQ A I + D ++EIGPG G LT+++ ++ V+A E+D ++
Sbjct: 26 KSLGQNFLNDLGVLKEIVQVADISTADDVIEIGPGIGALTEQIAQSAHEVMAFEIDENLL 85
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPLTFKL 141
L +PY+N +KVI D L+ +LP FD+ VAN+PY ++ P+ +
Sbjct: 86 PILDETL--SPYNN-IKVINQDFLQANLPKLIKENFDVQHRLKVVANLPYYVTKPILMDI 142
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L F ++M QKE A R+ A+PG++ Y L++ TQ V + V +F P PK
Sbjct: 143 LKGNVNFDVTVLMMQKEVAERISAKPGNRDYGALTIITQYLENVEIAINVSAQSFIPSPK 202
Query: 202 VDSSVVRIEPRKPRPQVNPVEWD-----GFLRICFIRKNKTL 238
VDSSVV++ P++ R N V +D GF CF+ + KTL
Sbjct: 203 VDSSVVKLTPKQKR---NMVAYDEKAFFGFAHGCFMHRRKTL 241
>gi|331701953|ref|YP_004398912.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
buchneri NRRL B-30929]
gi|329129296|gb|AEB73849.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
buchneri NRRL B-30929]
Length = 296
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 131/240 (54%), Gaps = 18/240 (7%)
Query: 13 QKSGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLT 71
Q + P + Q L +S KS GQ+ L + ++++IV A I D ++EIGPG G LT
Sbjct: 6 QIASPTRTQAILNRYHLSAKKSLGQNFLVDLGVLDNIVAAAKITKADNVIEIGPGIGGLT 65
Query: 72 KKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-- 124
++L +A V+A E+D+ ++ L PY N +++I D+LK +LP FD
Sbjct: 66 EQLAKAANKVVAFEIDANLLPVLDETL--APYDN-IEIINQDILKANLPKIIDDVFDTEK 122
Query: 125 ---CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
VAN+PY I++P+ L+ + F ++M QKE A RL A+P K Y LSV Q
Sbjct: 123 PLKVVANLPYYITTPIVMDLITGETQFDAIVVMMQKEVAERLNAEPSTKPYGSLSVIVQE 182
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVE---WDGFLRICFIRKNKTL 238
+V V K F P PKVDS++V++ PR R V P + + F+R CF+ + KTL
Sbjct: 183 LNQVEISFVVPKTAFIPQPKVDSAIVKLTPRVKR-AVEPFDQKAFISFVRGCFMHQRKTL 241
>gi|117925614|ref|YP_866231.1| dimethyladenosine transferase [Magnetococcus marinus MC-1]
gi|171460784|sp|A0LA32.1|RSMA_MAGSM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|117609370|gb|ABK44825.1| dimethyladenosine transferase [Magnetococcus marinus MC-1]
Length = 279
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 137/274 (50%), Gaps = 30/274 (10%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+S +K GQ+ L +P + IV AGIK+ D +LEIGPG G+LT LL+ V AVE
Sbjct: 15 GLSPNKRFGQNFLVDPSVAPRIVALAGIKAGDRVLEIGPGVGSLTIPLLQKAGAVTAVEK 74
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC---------VANIPYQISSPL 137
D +++ L+ L +++ D L D Y + AN+PY IS+PL
Sbjct: 75 DRKLLPLLRVEAAGV---GALTLVEEDALLVD--YTALAQQLGGPLKLAANLPYNISTPL 129
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
LL H AF C +MFQKE A RL A+PG K Y L+V L A + H V F
Sbjct: 130 MVHLLDHHAAFECMALMFQKEVAQRLAAEPGSKAYGALTVQCALWAEIRHGFDVPPAAFL 189
Query: 198 PPPKVDSSVVRIE-PRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFRLKNVLS---- 249
P PKV S+VV ++ R+PR V + F+R+ F ++ KTL + LK +
Sbjct: 190 PAPKVTSAVVHVQMMRQPRVAVE--DERHFVRVVKAAFAQRRKTLRNT--LKTICPDPNR 245
Query: 250 MLEK----NYRTLQALQSSQNSSLGNTEIGTDTP 279
LE+ + L +Q + L NT + T P
Sbjct: 246 WLEQAGIDGALRAEVLTLAQFAQLANTPMPTSAP 279
>gi|420262740|ref|ZP_14765381.1| dimethyladenosine transferase [Enterococcus sp. C1]
gi|394770497|gb|EJF50301.1| dimethyladenosine transferase [Enterococcus sp. C1]
Length = 295
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 122/230 (53%), Gaps = 18/230 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L P ++ IV+ AGI T ++E+GPG G LT++L + K V+
Sbjct: 17 LAKHGFTFKKSLGQNFLTEPNILRKIVETAGIDETTNVIEVGPGIGALTEQLAKHAKQVL 76
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP------YFDIC-----VANIPY 131
A E+D R++ L Q PY+N +K+I DVL+ DL + D VAN+PY
Sbjct: 77 AFEIDDRLIPVLADTMQ--PYAN-VKIIHQDVLQADLSTTIRSEFSDTAASLKVVANLPY 133
Query: 132 QISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
I++P+ L Q ++M QKE A R+ A PG K Y LS+ Q + V
Sbjct: 134 YITTPIMMHFLESQVPVDEMVVMMQKEVADRISAVPGTKAYGSLSIAVQYYMEAKLAFIV 193
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL 238
K F P P VDS+++++ R+P+P V + F ++ F + KTL
Sbjct: 194 PKTVFVPQPNVDSAILKLT-RRPQPAVAVTDEKEFFKLTKAAFQLRRKTL 242
>gi|296109078|ref|YP_003616027.1| dimethyladenosine transferase [methanocaldococcus infernus ME]
gi|295433892|gb|ADG13063.1| dimethyladenosine transferase [Methanocaldococcus infernus ME]
Length = 269
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 117/211 (55%), Gaps = 7/211 (3%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
+ KS GQH L + V ++ A +K D +LEIG G G LT++L + K V +E+D
Sbjct: 4 YKKSLGQHFLVDKNFVYKAIEGANLKEDDKVLEIGLGKGILTEELCKRAKKVYVIEIDKN 63
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--CVANIPYQISSPLTFKLLFHQPA 147
LE Y N L +I D LK +L D VAN+PYQISSP+TFKLL
Sbjct: 64 --LESFANSLINKYKN-LNIIWDDALKVNLKEIDYNKVVANLPYQISSPITFKLL--DRG 118
Query: 148 FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVV 207
F +++M+Q EFA R++A+ G K Y RLSV+ Q A L KV + F P PKV S++V
Sbjct: 119 FDLSVLMYQLEFAKRMIAKEGTKDYGRLSVSLQAQANAEILCKVPPSAFYPRPKVWSALV 178
Query: 208 RIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
+IEP +N ++ +R F +NK L
Sbjct: 179 KIEPHNKYKILNKEFFNNLVRGAFQHRNKFL 209
>gi|70732937|ref|YP_262708.1| dimethyladenosine transferase [Pseudomonas protegens Pf-5]
gi|118600886|sp|Q4K4X5.1|RSMA_PSEF5 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|68347236|gb|AAY94842.1| dimethyladenosine transferase [Pseudomonas protegens Pf-5]
Length = 270
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRMLEIGPGQGALTEGLLGSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L ++F + + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFAG---KSNFNLHQGDALKFDFNTLGAAPGSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
+VR+ P P P + + +R F ++ KTL + LK +LS E
Sbjct: 188 IVRLVPHAVLPHPAKDHRLLERIVREAFNQRRKTLRNT--LKALLSSAE 234
>gi|397688223|ref|YP_006525542.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Pseudomonas
stutzeri DSM 10701]
gi|395809779|gb|AFN79184.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri DSM 10701]
Length = 267
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K + ++EIGPG G LT+ LL +G + VELD ++
Sbjct: 10 KRFGQNFLHDAGVIDRILRAIHAKPGEQLVEIGPGQGALTEGLLGSGANLNVVELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
LQ +F + QGD LK D P V N+PY IS+PL F LL H
Sbjct: 70 PILQGKFAG---HENFSLHQGDALKFDFARLSETPGSLRVVGNLPYNISTPLIFHLLDHA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL AQPG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 127 RLIRDMHFMLQKEVVERLAAQPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHEVLPHPARDHRLLENLVRQAFSQRRKTLRNTLK 226
>gi|388543070|ref|ZP_10146362.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. M47T1]
gi|388279156|gb|EIK98726.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas sp. M47T1]
Length = 268
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 116/226 (51%), Gaps = 13/226 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ + D +LEIGPG G LT+ LL +G + VELD +V
Sbjct: 11 KRFGQNFLHDAGVIDRILRSINAREGDRVLEIGPGQGALTEGLLNSGAQLDVVELDKDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNNQFAG---RGNFSLHQGDALKFDFHTLGAEPGSLRVVGNLPYNISTPLIFHLLSNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVVHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
+VR+ P P P + + +R F ++ KTL + LK +LS
Sbjct: 188 IVRLVPHATLPHPAKDHRLLERVVREAFNQRRKTLRNT--LKALLS 231
>gi|358449944|ref|ZP_09160418.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Marinobacter manganoxydans MnI7-9]
gi|385333019|ref|YP_005886970.1| dimethyladenosine transferase [Marinobacter adhaerens HP15]
gi|311696169|gb|ADP99042.1| dimethyladenosine transferase [Marinobacter adhaerens HP15]
gi|357225787|gb|EHJ04278.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Marinobacter manganoxydans MnI7-9]
Length = 276
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 112/220 (50%), Gaps = 10/220 (4%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
G K GQ+ L +P ++E I++ K D I+EIGPG G LT+++L + VE
Sbjct: 5 AGHQARKRFGQNFLHDPGVIEQIIRAINPKPDDAIVEIGPGLGALTEEILAVNPKLQVVE 64
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----CVANIPYQISSPLTFK 140
LD ++ L+ +F + P ++ + D LK D + + N+PY IS+PL F
Sbjct: 65 LDRDLIPVLRTKFFNYP---EFRIHEADALKFDFSQLMVDRPLRIIGNLPYNISTPLIFH 121
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL + M QKE R+ A PGD Y RL + TQ RV L +VG FRP P
Sbjct: 122 LLSQAGVVQDMHFMLQKEVVQRMAAVPGDNNYGRLGIMTQYFCRVQPLFEVGPGAFRPAP 181
Query: 201 KVDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTL 238
KVDS++VR+ P K P P + +R F + KTL
Sbjct: 182 KVDSAIVRLVPHKTLPHPAKDLTTLQAVVRTAFNARRKTL 221
>gi|433544148|ref|ZP_20500538.1| dimethyladenosine transferase [Brevibacillus agri BAB-2500]
gi|432184504|gb|ELK42015.1| dimethyladenosine transferase [Brevibacillus agri BAB-2500]
Length = 298
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 125/225 (55%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ +IV +A + +EIGPG G LT++L A V+A+E+
Sbjct: 23 GFSFKKSLGQNFLVDTNILHNIVAEADLTKDKGAIEIGPGIGALTEQLGRAAGKVMAIEI 82
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI----------CVANIPYQISSP 136
D R++ LQ +PY N ++V+ GDVL+ DL VAN+PY +++P
Sbjct: 83 DQRLLPILQDTL--SPYEN-IEVVHGDVLELDLKALIAEKLSGVEKLSVVANLPYYVTTP 139
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + ++M QKE A R+ A+PG K Y LSV Q +A + V + F
Sbjct: 140 ILMKLLEERLPLENIVVMIQKEVAERIAAKPGTKDYGSLSVAAQFYAETEVAMIVPASVF 199
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTL 238
P P VDS+V+R++ R RP V+ + D F R+ F ++ KTL
Sbjct: 200 IPRPNVDSAVIRLKVRD-RPPVDVDDQDVFFRVVRSSFAQRRKTL 243
>gi|395651028|ref|ZP_10438878.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 270
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 115/221 (52%), Gaps = 11/221 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
L ++F + + QGD LK D + V N+PY IS+PL F LL +
Sbjct: 71 PILNQQFGG---KSNFILHQGDALKFDFNTLNAAPNSLRVVGNLPYNISTPLIFHLLNNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 GIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRL 244
+VR+ P P P + + +R F ++ KTL + +L
Sbjct: 188 IVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKL 228
>gi|15612620|ref|NP_240923.1| dimethyladenosine transferase [Bacillus halodurans C-125]
gi|27151607|sp|Q9KGK4.1|RSMA_BACHD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|10172669|dbj|BAB03776.1| dimethyladenosine transferase [Bacillus halodurans C-125]
Length = 289
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 135/257 (52%), Gaps = 23/257 (8%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L +P ++ +IV A + +EIGPG G LT++L K V+
Sbjct: 15 LAKHGFTFKKSLGQNFLIDPNVLRNIVDVASLTPQSGAIEIGPGIGALTEQLARQAKRVV 74
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQ 132
A E+D R++ L+ PY N + VI DVLK D+ F+ + VAN+PY
Sbjct: 75 AFEIDQRLIPVLRETL--APYEN-VTVINEDVLKADVKQVIATTFEEGQDLMVVANLPYY 131
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
+++P+ KLL + R ++M Q E A R+ A+PG K Y LS+ Q +A +KV
Sbjct: 132 VTTPILMKLLEAKLPVRGIVVMIQAEVADRIAAKPGTKEYGSLSIAAQYYATAELAVKVP 191
Query: 193 KNNFRPPPKVDSSVVRIEPR-KPRPQVNPVEWD-GFLRICFIRKNKTLSSIFRLKNVLSM 250
K F P P VDS+V+R+ R KP V EW +R F + KT+ L N++
Sbjct: 192 KTVFVPQPNVDSAVLRLTIREKPPVTVADEEWLFAIVRASFANRRKTI-----LNNLIHN 246
Query: 251 L---EKNYRTLQALQSS 264
L E+ + +QAL +
Sbjct: 247 LVGKERKDKAVQALAEA 263
>gi|373465297|ref|ZP_09556770.1| dimethyladenosine transferase [Lactobacillus kisonensis F0435]
gi|371760921|gb|EHO49581.1| dimethyladenosine transferase [Lactobacillus kisonensis F0435]
Length = 296
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
+S KS GQ+ L + ++ +IV+ A I D ++EIGPG G LT++L + V+ E+D
Sbjct: 22 LSAKKSLGQNFLVDLNVLSNIVEAAEITGDDDVIEIGPGIGGLTEQLAKVAHRVLGFEID 81
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI----------CVANIPYQISSPL 137
++ LQ PYSN +K+I D+LK +LP VAN+PY I++P+
Sbjct: 82 QNLLPVLQETL--APYSN-IKIINQDILKANLPQVVKTELTGKHPLKVVANLPYYITTPI 138
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
LL AF ++M QKE A RL A PG K Y LSV Q V V + F
Sbjct: 139 VMNLLAGDLAFDAIVVMMQKEVAERLTAVPGTKAYGSLSVIVQERNNVEISFIVPRTAFI 198
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE---WDGFLRICFIRKNKTL 238
P PKVDS+++++ P+ + +V P + + GF+R CF+ + KTL
Sbjct: 199 PQPKVDSAIIKLTPKLAK-EVVPFDEKRFAGFVRGCFMHQRKTL 241
>gi|295702279|ref|YP_003595354.1| dimethyladenosine transferase [Bacillus megaterium DSM 319]
gi|294799938|gb|ADF37004.1| dimethyladenosine transferase [Bacillus megaterium DSM 319]
Length = 292
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 126/226 (55%), Gaps = 19/226 (8%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G +F KS GQ+ L + ++ IV A I +EIGPG G LT++L + K V+A E+
Sbjct: 19 GFTFKKSLGQNFLIDTNILHRIVDHAEITEETGAIEIGPGIGALTEQLAKRAKKVLAFEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD-----ICVANIPYQISSP 136
D R++ L +PYSN KVI DVLK DL F+ + VAN+PY +++P
Sbjct: 79 DQRLLPILADTL--SPYSNA-KVIHQDVLKADLKGMLEQEFENIEDLMVVANLPYYVTTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL Q R ++M QKE A R+ A+PG K Y LS+ Q + ++ V K F
Sbjct: 136 ILMKLLEEQIPVRGIVVMLQKEVAERIAAKPGTKEYGSLSIAIQYYTEAETVMIVPKTVF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF----LRICFIRKNKTL 238
P P VDS+V+R+ R+P+P V V+ + F +R F ++ KT+
Sbjct: 196 NPQPNVDSAVIRL-LRRPKPAVE-VQDEAFFFQVVRASFGQRRKTI 239
>gi|452990586|emb|CCQ98207.1| dimethyladenosine 16S ribosomal RNA transferase [Clostridium
ultunense Esp]
Length = 282
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 138/252 (54%), Gaps = 19/252 (7%)
Query: 20 GQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGK 79
G+ L G+S KS GQ+ L +P +V+ I + A ++S D ++EIGPG G LT +L + K
Sbjct: 12 GEILKKYGVSLRKSLGQNFLIDPNMVKKIAESAHLESEDGVIEIGPGVGVLTAELAKRAK 71
Query: 80 MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI----------CVANI 129
V+AVE+D R++ L F+ +++I GD+LK +L VAN+
Sbjct: 72 KVVAVEIDGRLIPILSDIFRDW---KSIRIIHGDILKINLHEITSFLLQETKRVHVVANL 128
Query: 130 PYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLL 189
PY +++P+ +LL + ++M Q+E A R+ A+PG K Y LS+ Q A+V +L
Sbjct: 129 PYYVTTPILMRLLEDKLPLTSIVVMVQREVADRIAAEPGGKEYGALSIACQYFAKVEKVL 188
Query: 190 KVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKTLSSIFRLKN 246
+V K F P P+VDS+V+R+ P V E + F +R F + KTL + L++
Sbjct: 189 QVPKEVFYPKPEVDSTVIRLM-LYAFPPVRVEEENLFFQVVRASFANRRKTLFN--NLRS 245
Query: 247 VLSMLEKNYRTL 258
LE+N +L
Sbjct: 246 AFPELEQNLSSL 257
>gi|53805073|ref|YP_113120.1| dimethyladenosine transferase [Methylococcus capsulatus str. Bath]
gi|62900497|sp|Q60B77.1|RSMA_METCA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|53758834|gb|AAU93125.1| dimethyladenosine transferase [Methylococcus capsulatus str. Bath]
Length = 257
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 114/218 (52%), Gaps = 9/218 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L++P +++ IV G +D ++EIGPG G LT++LL++G + A+ELD +V
Sbjct: 7 KRFGQNFLRDPGVIQEIVAAVGPAPSDRLVEIGPGEGVLTRELLQSGACLEAIELDRDLV 66
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----CVANIPYQISSPLTFKLLFHQP 146
L+RRF RL++ +GD +K DL V N+PY IS+PL F L
Sbjct: 67 AALKRRFAGV---GRLRIHEGDAMKFDLRTIATGERLRVVGNLPYNISTPLLFHLFDQID 123
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
M QKE RL A GD Y RLSV L+ + HL VG F P PKV S+V
Sbjct: 124 VIEDMHFMLQKEVVDRLCAGAGDDHYGRLSVMAALYCQAQHLFDVGPECFHPQPKVVSAV 183
Query: 207 VRIEPRKPRPQVNPV-EWDGFLRICFIRKNKTLSSIFR 243
VR+ P P V + + F ++ KTL + +
Sbjct: 184 VRLVPHAVPPDAGMVKQVSAVVVAAFGQRRKTLRNALK 221
>gi|399046071|ref|ZP_10738608.1| dimethyladenosine transferase [Brevibacillus sp. CF112]
gi|398055856|gb|EJL47906.1| dimethyladenosine transferase [Brevibacillus sp. CF112]
Length = 298
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 125/225 (55%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ +IV +A + +EIGPG G LT++L A V+A+E+
Sbjct: 23 GFSFKKSLGQNFLVDTNILHNIVAEADLTKDKGAIEIGPGIGALTEQLGRAAGKVMAIEI 82
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI----------CVANIPYQISSP 136
D R++ LQ +PY N ++V+ GDVL+ DL VAN+PY +++P
Sbjct: 83 DQRLLPILQDTL--SPYEN-IEVVHGDVLELDLKALIAEKFSGVEKLSVVANLPYYVTTP 139
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + ++M QKE A R+ A+PG K Y LSV Q +A + V + F
Sbjct: 140 ILMKLLEERLPLENIVVMIQKEVAERIAAKPGTKDYGSLSVAAQFYAETEVAMIVPASVF 199
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTL 238
P P VDS+V+R++ R RP V+ + D F R+ F ++ KTL
Sbjct: 200 IPRPNVDSAVIRLKVRD-RPPVDVDDQDVFFRVVRSSFAQRRKTL 243
>gi|294496912|ref|YP_003560612.1| dimethyladenosine transferase [Bacillus megaterium QM B1551]
gi|294346849|gb|ADE67178.1| dimethyladenosine transferase [Bacillus megaterium QM B1551]
Length = 292
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 126/226 (55%), Gaps = 19/226 (8%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G +F KS GQ+ L + ++ IV A I +EIGPG G LT++L + K V+A E+
Sbjct: 19 GFTFKKSLGQNFLIDTNILHRIVDHAEITEETGAIEIGPGIGALTEQLAKRAKKVLAFEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD-----ICVANIPYQISSP 136
D R++ L +PYSN KVI DVLK DL F+ + VAN+PY +++P
Sbjct: 79 DQRLLPILADTL--SPYSNA-KVIHQDVLKADLKGTLEQEFENIEDLMVVANLPYYVTTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL Q R ++M QKE A R+ A+PG K Y LS+ Q + ++ V K F
Sbjct: 136 ILMKLLEEQIPVRGIVVMLQKEVADRIAAKPGTKEYGSLSIAIQYYTEAETVMIVPKTVF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF----LRICFIRKNKTL 238
P P VDS+V+R+ R+P+P V V+ + F +R F ++ KT+
Sbjct: 196 NPQPNVDSAVIRL-LRRPKPAVE-VQDEAFFFQVVRASFGQRRKTI 239
>gi|431928742|ref|YP_007241776.1| dimethyladenosine transferase [Pseudomonas stutzeri RCH2]
gi|431827029|gb|AGA88146.1| dimethyladenosine transferase [Pseudomonas stutzeri RCH2]
Length = 264
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K + ++EIGPG G LT+ LL++G + VELD ++
Sbjct: 10 KRFGQNFLHDAGVIHRILRAIHAKPGERLVEIGPGQGALTEGLLDSGAHLDVVELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ +F + + QGD LK D V N+PY IS+PL F LL H
Sbjct: 70 PILQGKFAE---RDNFTLHQGDALKFDFSRLSAEPNSLRIVGNLPYNISTPLIFHLLAHA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 127 HLIRDMHFMLQKEVVERLAATPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPARDHRQLERVVREAFNQRRKTLRNTLK 226
>gi|403514251|ref|YP_006655071.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Lactobacillus
helveticus R0052]
gi|403079689|gb|AFR21267.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus helveticus R0052]
Length = 294
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 128/224 (57%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ A I + D ++EIGPG G+LT++LL G V A E+D +
Sbjct: 26 KNLGQNFLIDQNAILGIVEAADIHAGDQVIEIGPGIGSLTEQLLLDGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P +R K++ DVLK + +FD+ VAN+PY I++P+
Sbjct: 86 EILQNELPKKIGDAPLEDRFKLMLKDVLKANFKEDLAGFFDMSKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL A+PG K Y L+++ Q V L+V N+F
Sbjct: 146 IFALAESDLHFASLTLMMQKEVAERLEAKPGSKEYGPLTISVQTEMDVKVALEVNHNSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P PKVDSSVV + P K +P++ N + +++CF ++ KTL++
Sbjct: 206 PRPKVDSSVVVLTPLKNKPEIENRKHFVWVVKMCFSQRRKTLNN 249
>gi|184154665|ref|YP_001843005.1| dimethyladenosine transferase [Lactobacillus fermentum IFO 3956]
gi|227514301|ref|ZP_03944350.1| dimethyladenosine transferase [Lactobacillus fermentum ATCC 14931]
gi|183226009|dbj|BAG26525.1| dimethyladenosine transferase [Lactobacillus fermentum IFO 3956]
gi|227087349|gb|EEI22661.1| dimethyladenosine transferase [Lactobacillus fermentum ATCC 14931]
Length = 295
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 119/226 (52%), Gaps = 17/226 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI K GQ+ L NP ++ IV+ AGI D ++EIGPG G LT+KL +A V+A+E+
Sbjct: 19 GIHAKKGFGQNFLTNPDVLSGIVRAAGITKDDNVIEIGPGIGALTEKLAQAAGEVVALEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL----------PYFDI-CVANIPYQISS 135
D ++ L PY N + V+ DVLK +L P + VAN+PY I+S
Sbjct: 79 DESLLPVLDDVL--APYGN-VTVLNQDVLKANLADLVQTAFKDPTKPVKVVANLPYYITS 135
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
P+ F LL Q + +M QKE A RLVA+PG K Y L++ V V + +
Sbjct: 136 PILFALLASQVEWAAVCVMMQKEVADRLVAKPGTKDYGALTLAIDYRMDVKVAFNVSRKS 195
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEWD---GFLRICFIRKNKTL 238
F P P VDS++V + + V+P D G +R CF + K+L
Sbjct: 196 FVPAPNVDSAIVVLTQKSAALPVSPFNEDRLFGLIRGCFAHRRKSL 241
>gi|448611918|ref|ZP_21662348.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax mucosum ATCC BAA-1512]
gi|445742679|gb|ELZ94173.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloferax mucosum ATCC BAA-1512]
Length = 287
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 118/220 (53%), Gaps = 5/220 (2%)
Query: 26 GGISFHKSKGQHILKNPLLVESI-VQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
G+ ++ QH L + +V+ I +LEIG G G LT +LL V V
Sbjct: 24 AGVRGDPNRDQHFLIDDRVVDRIPTYLPADADRSHVLEIGGGPGVLTDRLLAVADRVTVV 83
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
E D L+R F ++RL V++GD L+ +LP F CV+N+PY ISS ++F+LL
Sbjct: 84 EQDRSFADHLRREFADAIAADRLTVLEGDALELELPEFTACVSNLPYGISSEISFRLL-- 141
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
P + ++MFQKEF R+ A+ G Y RLSV+ Q + V V + F P P V S
Sbjct: 142 -PRGKPLVLMFQKEFGERMAAESGTSEYGRLSVSAQHYGDVEVCEIVPREAFDPKPAVQS 200
Query: 205 SVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
++VRI PR P +V+ E + F++ F ++ KT+ + R
Sbjct: 201 AIVRITPRAPDYEVDDEEFFFDFVKALFTQRRKTIRNGIR 240
>gi|312137230|ref|YP_004004567.1| dimethyladenosine transferase [Methanothermus fervidus DSM 2088]
gi|311224949|gb|ADP77805.1| dimethyladenosine transferase [Methanothermus fervidus DSM 2088]
Length = 283
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 102/183 (55%), Gaps = 3/183 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L IS + GQ+ L N + I+ A + D +LEIGPG G LT + + K VI
Sbjct: 15 LKKYNISLSRRLGQNFLINEYIRNKIINYANLNKKDTVLEIGPGIGTLTIPMAKYAKKVI 74
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
A+E D +MV L+ R N +++I D LK P F+ V+N+PY ISSP+TFKLL
Sbjct: 75 AIEKDCKMVEILKDRIHDLKIDN-IEIINADALKIKFPKFNKVVSNLPYTISSPITFKLL 133
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ F ++M+QKEFA RL+A+PG Y RLSV A V L + +F P PKV
Sbjct: 134 NYD--FNLGVLMYQKEFAQRLIAKPGTSNYSRLSVMMYFKANVELLDIIPPKSFIPRPKV 191
Query: 203 DSS 205
S+
Sbjct: 192 KSA 194
>gi|257051708|ref|YP_003129541.1| dimethyladenosine transferase [Halorhabdus utahensis DSM 12940]
gi|256690471|gb|ACV10808.1| dimethyladenosine transferase [Halorhabdus utahensis DSM 12940]
Length = 292
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 120/233 (51%), Gaps = 6/233 (2%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKM 80
L G + QH L + +++ I A D+ +LEIG G G LT +LL
Sbjct: 21 LARAGARGDPDQDQHFLVDDRVLDRIPTYATEAGIDLGHVLEIGAGNGALTDRLLAVADW 80
Query: 81 VIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
V AVE D + L+ F + RL VI+GD L+ DLP + ++N+PY SS + F+
Sbjct: 81 VTAVERDPDLAAFLRTEFADAIEAGRLTVIEGDALEVDLPDYTASISNLPYGASSEILFR 140
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL PA + I M Q EFA R+ A PG Y RLSV +A V + V F PPP
Sbjct: 141 LL---PAGKPLIAMVQAEFADRMAADPGSDDYGRLSVTAGHYADVEVVEPVPPEAFSPPP 197
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWD-GFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS++VR PR+P V ++ GF++ F ++ KT+ + R +S L+
Sbjct: 198 AVDSALVRALPREPNYTVPDDDFFLGFVKAVFTQRRKTVRNGIRNTAHISGLD 250
>gi|366087169|ref|ZP_09453654.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus zeae KCTC 3804]
Length = 298
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 119/224 (53%), Gaps = 15/224 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L +P +++ IV A + S D ++EIGPG G LT+ L ++ V+A+E+
Sbjct: 21 GFRMRKGLGQNFLTDPQILQKIVAAADLSSQDDVIEIGPGIGALTQFLADSAHQVVALEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKTDL +FD VAN+PY I++P
Sbjct: 81 DERLLPILAETLADYPNT---AVVNEDVLKTDLSALVAEHFDGKHTLKVVANLPYYITTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL + +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 138 ILLHLLRARLPLHSMTVMMQKEVAARLSATPGSKDYGSLSIAVQLVADVTTAFTVSRHAF 197
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R +P V NP ++ +R F + KTL
Sbjct: 198 VPAPNVDSAIVTLTQRSEPLAAVTNPDSFERLVRGAFASRRKTL 241
>gi|336394517|ref|ZP_08575916.1| dimethyladenosine transferase [Lactobacillus farciminis KCTC 3681]
Length = 293
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 128/221 (57%), Gaps = 21/221 (9%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KS GQ+ L N +++ IV +G+KS ++ +EIGPG G LT+KL + + V A E+D ++
Sbjct: 27 KSLGQNFLTNEKVLDDIVDASGLKSDEIAIEIGPGIGALTEKLAQVAEKVFAFEIDDNLI 86
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYF----------DICVANIPYQISSPLTFKL 141
L Q Y + ++VI D+LK DL F VAN+PY I++P+ L
Sbjct: 87 PVLADTLQ---YYDNIEVINQDILKVDLDEFVKEHGLEGKTIKVVANLPYYITTPIMLNL 143
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLS--VNTQLHARVSHLLKVGKNNFRPP 199
+ F+ ++M QKE A R+ A+PG + Y L+ V TQ++AR+ + VG ++F P
Sbjct: 144 INSDYPFQSLVLMMQKEVAQRITAKPGHREYGSLTIAVQTQMNARIDRI--VGSSSFIPR 201
Query: 200 PKVDSSVVRIEPRKPRPQV---NPVEWDGFLRICFIRKNKT 237
PKVDS+V ++ R P+ QV +P ++ +R F++K K+
Sbjct: 202 PKVDSAVAVLD-RLPKEQVDIEDPKFFNQVVRSAFMQKRKS 241
>gi|335998358|ref|ZP_08564270.1| dimethyladenosine transferase [Lactobacillus ruminis SPM0211]
gi|335348872|gb|EGM50373.1| dimethyladenosine transferase [Lactobacillus ruminis SPM0211]
Length = 296
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 125/225 (55%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G++F KS GQ+ L + +++ IV A + D ++EIGPG G LT++L ++ V+A+E+
Sbjct: 22 GLTFKKSLGQNFLTDLNILKKIVAAAEVGEEDDVIEIGPGIGALTEQLAKSAHQVMALEI 81
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY-----FD-----ICVANIPYQISSP 136
DSR++ L +PY N +K+++ DVLK DL FD VAN+PY I++P
Sbjct: 82 DSRLIPVLSETL--SPYDN-VKIVEQDVLKADLKELIAQNFDGRHKIKLVANLPYYITTP 138
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL F ++M QKE A RL AQPG K Y LSV Q V K F
Sbjct: 139 IVMHLLDVDVDFETIVVMMQKEVADRLAAQPGTKDYGSLSVAVQYEMDAKIAFIVPKTVF 198
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTL 238
P PKVDS+++ + + +P V PV+ F ++ F+ + K+L
Sbjct: 199 MPQPKVDSAIIALNRKDEKPDV-PVDEPFFKKMVKGIFLHRRKSL 242
>gi|347524947|ref|YP_004831695.1| Dimethyladenosine transferase [Lactobacillus ruminis ATCC 27782]
gi|345283906|gb|AEN77759.1| Dimethyladenosine transferase [Lactobacillus ruminis ATCC 27782]
Length = 296
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 125/225 (55%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G++F KS GQ+ L + +++ IV A + D ++EIGPG G LT++L ++ V+A+E+
Sbjct: 22 GLTFKKSLGQNFLTDLNILKKIVAAAEVGEEDDVIEIGPGIGALTEQLAKSAHQVMALEI 81
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY-----FD-----ICVANIPYQISSP 136
DSR++ L +PY N +K+++ DVLK DL FD VAN+PY I++P
Sbjct: 82 DSRLIPVLSETL--SPYDN-VKIVEQDVLKADLKELIAQNFDGRHKIKLVANLPYYITTP 138
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL F ++M QKE A RL AQPG K Y LSV Q V K F
Sbjct: 139 IVMHLLEVDVDFETIVVMMQKEVADRLAAQPGTKDYGSLSVAVQYEMDAKIAFIVPKTVF 198
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTL 238
P PKVDS+++ + + +P V PV+ F ++ F+ + K+L
Sbjct: 199 MPQPKVDSAIIALNRKDEKPNV-PVDEPFFKKMVKGIFLHRRKSL 242
>gi|323340527|ref|ZP_08080782.1| dimethyladenosine transferase [Lactobacillus ruminis ATCC 25644]
gi|417972535|ref|ZP_12613433.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus ruminis ATCC 25644]
gi|323092071|gb|EFZ34688.1| dimethyladenosine transferase [Lactobacillus ruminis ATCC 25644]
gi|346331108|gb|EGX99329.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus ruminis ATCC 25644]
Length = 296
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 125/225 (55%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G++F KS GQ+ L + +++ IV A + D ++EIGPG G LT++L ++ V+A+E+
Sbjct: 22 GLTFKKSLGQNFLTDLNILKKIVAAAEVGEEDDVIEIGPGIGALTEQLAKSAHQVMALEI 81
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY-----FD-----ICVANIPYQISSP 136
DSR++ L +PY N +K+++ DVLK DL FD VAN+PY I++P
Sbjct: 82 DSRLIPVLSETL--SPYDN-VKIVEQDVLKADLKELIAQNFDGRHKIKLVANLPYYITTP 138
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL F ++M QKE A RL AQPG K Y LSV Q V K F
Sbjct: 139 IVMHLLEVDVDFETIVVMMQKEVADRLAAQPGTKDYGSLSVAVQYEMDAKIAFIVPKTVF 198
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTL 238
P PKVDS+++ + + +P V PV+ F ++ F+ + K+L
Sbjct: 199 MPQPKVDSAIIALNRKDEKPDV-PVDEPFFKKMVKGIFLHRRKSL 242
>gi|381210591|ref|ZP_09917662.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lentibacillus sp. Grbi]
Length = 294
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 129/230 (56%), Gaps = 19/230 (8%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G SF KS GQ+ + + ++ +I+QK GI + +EIGPG G LT++L VI
Sbjct: 16 LETHGFSFKKSLGQNFIIDANILYNIIQKTGIDNRAGAIEIGPGIGALTEQLAVHANNVI 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFDI-----CVANIPYQ 132
A E+D R++ L+ PY+N +++I D+L+ ++ +F VAN+PY
Sbjct: 76 AYEIDQRLLSILKETL--APYNN-IQIIHQDILEANVSEMAKAHFKPGQPIHVVANLPYY 132
Query: 133 ISSPLTFKLLFHQ-PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
I++P+ KLL P R + M QKE A R+ A P +K Y LS+ Q + + ++ V
Sbjct: 133 ITTPILMKLLREDLPVMRFTV-MIQKEVAERMAAAPNNKRYGSLSIAVQYYTQAEIVMNV 191
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL 238
K+ F PPP VDSSV+++ R+ RP V ++ D F I CF ++ KTL
Sbjct: 192 PKSAFMPPPNVDSSVLKLT-RRERPPVQVIDEDFFFDIVQACFAQRRKTL 240
>gi|260663712|ref|ZP_05864600.1| dimethyladenosine transferase [Lactobacillus fermentum 28-3-CHN]
gi|260551763|gb|EEX24879.1| dimethyladenosine transferase [Lactobacillus fermentum 28-3-CHN]
Length = 295
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 119/226 (52%), Gaps = 17/226 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI K GQ+ L NP ++ IV+ AGI D ++EIGPG G LT+KL +A V+A+E+
Sbjct: 19 GIHAKKGFGQNFLTNPDVLSGIVRAAGITKDDNVIEIGPGIGALTEKLAQAAGEVVALEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL----------PYFDI-CVANIPYQISS 135
D ++ L PY N + V+ DVLK +L P + VAN+PY I+S
Sbjct: 79 DESLLPVLDDVL--APYGN-VTVLNQDVLKANLADLVQTAFKDPTKPVKVVANLPYYITS 135
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
P+ F LL Q + +M QKE A RLVA+PG K Y L++ V V + +
Sbjct: 136 PILFALLASQVEWAAVCVMMQKEVADRLVAKPGTKDYGALTLAIDYRMDVKVAFNVSRKS 195
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEWD---GFLRICFIRKNKTL 238
F P P VDS++V + + V+P D G +R CF + K+L
Sbjct: 196 FVPAPNVDSAIVVLTQKSAALPVSPFNEDRLFGLIRGCFAHRRKSL 241
>gi|149377956|ref|ZP_01895682.1| dimethyladenosine transferase [Marinobacter algicola DG893]
gi|149357730|gb|EDM46226.1| dimethyladenosine transferase [Marinobacter algicola DG893]
Length = 276
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 134/274 (48%), Gaps = 15/274 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L +P ++E I++ + D ++EIGPG G LT+++L + VELD ++
Sbjct: 11 KRFGQNFLHDPGVIERIIRAIHPRPDDALVEIGPGLGALTEEMLAVNSNLQVVELDRDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----CVANIPYQISSPLTFKLLFHQP 146
L+ +F + P ++ + D LK D + N+PY IS+PL F LL H
Sbjct: 71 PVLRTKFFNYP---NFRIHEADALKFDFGELVADKPLRIIGNLPYNISTPLIFHLLGHSG 127
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
+ M QKE R+ A PGD Y RL + TQ RV L +VG FRP PKVDS++
Sbjct: 128 VVQDMHFMLQKEVVQRMAAVPGDNNYGRLGIMTQYFCRVQPLFEVGPGAFRPAPKVDSAI 187
Query: 207 VRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
VR+ P K P P N +R F + KTL L ++S+ + N +
Sbjct: 188 VRLVPHKTLPHPAKNYKLLQAVVRTAFSARRKTLRKA--LAGMVSVEQLNSIGINDGLRP 245
Query: 265 QNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDD 298
+N LG E L DS ++ G D+ S D
Sbjct: 246 EN--LGLAEYVAIADLLADSR-PENFGADEVSHD 276
>gi|334120144|ref|ZP_08494226.1| Ribosomal RNA small subunit methyltransferase A [Microcoleus
vaginatus FGP-2]
gi|333456932|gb|EGK85559.1| Ribosomal RNA small subunit methyltransferase A [Microcoleus
vaginatus FGP-2]
Length = 273
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 138/253 (54%), Gaps = 23/253 (9%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K QH LK+ ++ IV+ A + D +LEIGPGTG LT++LL A + V+AVE+D +
Sbjct: 7 RKQFAQHWLKSEKALDKIVKAASL-DRDRVLEIGPGTGILTRRLLPAAESVVAVEIDRDL 65
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFK 140
L+L ++ T + ++QGD+L+ DL P F + VANIPY I+ P+ K
Sbjct: 66 CLKLAKQLGKT---DNFLLLQGDILEMDLEAELTAFPKFQNPNKVVANIPYNITGPILQK 122
Query: 141 LL--FHQPA---FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL PA F +++ QKE A RL A+PG + LSV Q A + V +
Sbjct: 123 LLGTISVPAAKPFDSIVLLVQKEVAQRLYAKPGSTAFGALSVRVQYLAECELICDVPSKD 182
Query: 196 FRPPPKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN 254
F PPPKVDS+VVR+ PR P VNP + +++ F K K L + LK + L+K
Sbjct: 183 FFPPPKVDSAVVRLVPRLIETPAVNPRYLENLVKLGFGSKRKMLRN--NLKGAVD-LDKL 239
Query: 255 YRTLQALQSSQNS 267
+ L+ LQ + S
Sbjct: 240 VQLLEELQINPQS 252
>gi|448725973|ref|ZP_21708400.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus morrhuae DSM 1307]
gi|445796992|gb|EMA47476.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halococcus morrhuae DSM 1307]
Length = 293
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 124/238 (52%), Gaps = 3/238 (1%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G+ + QH L + +++ + T +LEIG GTG LT +LL+ K V
Sbjct: 24 LARAGVRADPDQDQHFLVDDRVLDRLASHTTELDTSHVLEIGAGTGALTDRLLDRAKRVT 83
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLL 142
VE DSR+ L+ F + RL V++GD L DLP F ++N+PY ISS + F+LL
Sbjct: 84 TVERDSRLAAFLREEFADAIAAGRLTVVEGDALAIDLPEFTASLSNLPYGISSEVLFRLL 143
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
P R ++ Q+EFA R+VA P + Y RLSV +A + V F PPP V
Sbjct: 144 ---PRKRPLVVTVQREFAERMVAAPNTENYGRLSVTAGHYADCEIVETVPPAAFSPPPAV 200
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQA 260
+S+VVR PR P V + F+R F ++ KTL + R ++ +E+ ++A
Sbjct: 201 ESAVVRTRPRDPDYGVPEEPFLAFVRGVFTQRRKTLRNAIRNTGHITGIERPEAVVEA 258
>gi|422591071|ref|ZP_16665720.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330878396|gb|EGH12545.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas syringae pv. morsprunorum str. M302280]
Length = 268
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 103/192 (53%), Gaps = 9/192 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + +++ I++ K D +LEIGPG G LT+ LL +G + VELD ++
Sbjct: 11 KRFGQNFLHDAGVIDKILRAIRAKPEDRLLEIGPGQGALTEGLLGSGAQLDVVELDKDLI 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
L +F S P N + QGD LK D P V N+PY IS+PL F LL +
Sbjct: 71 PILNSQFASKPNFN---LHQGDALKFDFNTLGAEPRSLRVVGNLPYNISTPLIFHLLQNA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+ A PG + RLS+ Q H RV HL VG F PPPKVDS+
Sbjct: 128 SLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKVDSA 187
Query: 206 VVRIEPRKPRPQ 217
+VR+ P + P
Sbjct: 188 IVRLVPYETLPH 199
>gi|421770168|ref|ZP_16206869.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP2]
gi|421772754|ref|ZP_16209407.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP3]
gi|411182696|gb|EKS49841.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP2]
gi|411183168|gb|EKS50308.1| Dimethyladenosine transferase [Lactobacillus rhamnosus LRHMDP3]
Length = 294
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L +P +++ IV A + D ++EIGPG G LT+ L + V+A+E+
Sbjct: 19 GFHMRKGLGQNFLTDPQILQKIVAAADVSQQDDVIEIGPGIGALTQFLADQAHQVVALEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKT+L +FD VAN+PY I++P
Sbjct: 79 DDRLLPILAETLADYPNTT---VVNEDVLKTNLTELVATHFDGNHTLKVVANLPYYITTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL + +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 136 ILLHLLRARLPLHSMTVMMQKEVAARLSAAPGSKDYGSLSIAVQLVADVATAFTVSRHAF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQV---NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R P P NP +D +R F+ + KTL
Sbjct: 196 VPAPNVDSAIVTLTQR-PEPLAAVKNPDSFDRLVRGAFVSRRKTL 239
>gi|428311804|ref|YP_007122781.1| dimethyladenosine transferase [Microcoleus sp. PCC 7113]
gi|428253416|gb|AFZ19375.1| dimethyladenosine transferase [Microcoleus sp. PCC 7113]
Length = 297
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 132/247 (53%), Gaps = 26/247 (10%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K QH L++ + IV A ++ ++ ILEIGPGTG LT++LL + V+AVE+D +
Sbjct: 23 RKQFAQHWLRSEAALNQIVAAAQLQKSERILEIGPGTGILTRRLLPQAESVVAVEIDRDL 82
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFK 140
L ++ +S + N L ++QGD L D+ P F + VANIPY I+ P+ K
Sbjct: 83 CKLLVQKLRS--FDNFL-LLQGDFLTLDIDAQLASFPAFQNPNKVVANIPYNITGPILEK 139
Query: 141 LL--FHQPA---FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL QPA F +++ QKE A RL A+P + + LSV Q A + +V
Sbjct: 140 LLGTISQPAADPFDLIVLLVQKEVAERLYAKPSSRAFGALSVRVQYLAECELICEVPAKA 199
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEW-DGFLRICFIRKNKTLSSIF-------RLKNV 247
F PPPKVDS+VVR+ PR+ PQ +W + L++ F K K L + RL +
Sbjct: 200 FSPPPKVDSAVVRLRPRRVEPQATEPKWLETLLKLGFSSKRKMLRNNLKSVVECDRLTQL 259
Query: 248 LSMLEKN 254
L L+ N
Sbjct: 260 LEQLDVN 266
>gi|428304802|ref|YP_007141627.1| dimethyladenosine transferase [Crinalium epipsammum PCC 9333]
gi|428246337|gb|AFZ12117.1| dimethyladenosine transferase [Crinalium epipsammum PCC 9333]
Length = 291
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 120/224 (53%), Gaps = 19/224 (8%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K GQH L++ +++I+ A + D +LEIGPG G LT+KLL + +AVE+D +
Sbjct: 6 RKQFGQHWLRSEKALDNIIAAAELSEGDRVLEIGPGQGVLTRKLLPKVQSAVAVEIDRDL 65
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDLPY----------FDICVANIPYQISSPLTFK 140
L Q Y ++ ++QGD+L DLP + VANIPY I+ P+ K
Sbjct: 66 CKVLA---QKIGYFDKFLLLQGDILTLDLPAHLASFPNFQNLNKVVANIPYNITGPILEK 122
Query: 141 LL--FHQPA---FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL PA + +++ QKE A RL A+PG + + LSV Q A + V +
Sbjct: 123 LLGRIATPASAPYDLIVLLVQKEVAERLYAKPGSRAFGALSVRVQYLAECELICSVPARD 182
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPV-EWDGFLRICFIRKNKTL 238
F PPPKVDS+VVR+ PR+ PQ N + + +R+ F K K L
Sbjct: 183 FYPPPKVDSAVVRLRPRQFEPQANDAKKLESLVRLGFAEKRKML 226
>gi|227522373|ref|ZP_03952422.1| dimethyladenosine transferase [Lactobacillus hilgardii ATCC 8290]
gi|227090431|gb|EEI25743.1| dimethyladenosine transferase [Lactobacillus hilgardii ATCC 8290]
Length = 301
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 131/240 (54%), Gaps = 22/240 (9%)
Query: 15 SGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKK 73
+ P + Q L +S KS GQ+ L + ++ +IV+ A + D ++EIGPG G LT++
Sbjct: 13 ASPARTQAILNRYRLSAKKSLGQNFLIDLNILNNIVEAAELTKNDNVIEIGPGIGGLTEQ 72
Query: 74 LLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--------- 124
L +A V+A E+D +++ L +PY+N +++I D+LK +LP
Sbjct: 73 LAKAANQVLAFEIDEKLLPVLDETL--SPYNN-IEIINQDILKANLPEVVAKRFRTDKPL 129
Query: 125 -CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
VAN+PY I++P+ LL + F ++M QKE A RL A+PG K Y LSV Q
Sbjct: 130 KVVANLPYYITTPIVMDLLANPVKFESIVVMMQKEVAERLDAKPGTKPYGSLSVIVQQQN 189
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWD-----GFLRICFIRKNKTL 238
V V K F P PKVDS++V++ P+ QV+ +D GF+R CF+ + KTL
Sbjct: 190 DVDISFVVPKTAFIPQPKVDSAIVKLSPKM---QVDKRPFDHKKFVGFVRGCFMHQRKTL 246
>gi|392422719|ref|YP_006459323.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri CCUG 29243]
gi|390984907|gb|AFM34900.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Pseudomonas stutzeri CCUG 29243]
Length = 264
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K + ++EIGPG G LT+ LL++G + VELD ++
Sbjct: 10 KRFGQNFLHDAGVIHRILRAIHAKPGERLVEIGPGQGALTEGLLDSGAHLDVVELDLDLI 69
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFHQ 145
LQ +F N + QGD LK D P V N+PY IS+PL F LL H
Sbjct: 70 PILQGKFAGRENFN---LHQGDALKFDFGRLSAEPNSLRIVGNLPYNISTPLIFHLLDHA 126
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE RL A PG + RLS+ Q H RV HL VG F P PKVDS+
Sbjct: 127 HLIRDMHFMLQKEVVERLAALPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPAPKVDSA 186
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P + P P + + + +R F ++ KTL + +
Sbjct: 187 IVRLVPHETLPHPARDHHQLERVVREAFNQRRKTLRNTLK 226
>gi|336392333|ref|ZP_08573732.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 296
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 120/228 (52%), Gaps = 15/228 (6%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L A G++F KS GQ+ L P ++ I A + + D +LEIGPG G+LT++L + V+
Sbjct: 18 LAAYGLTFKKSLGQNFLTEPTILRQIASAAELTTADDVLEIGPGIGSLTEQLAQNAHQVL 77
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD-----ICVANIPYQ 132
A+E+D R++ L PY N + V+ DVLK+DL +FD VAN+PY
Sbjct: 78 ALEIDQRLLPILADTL--APYDN-VTVLNQDVLKSDLATLIRDHFDGQHKVKVVANLPYY 134
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ +LL F ++M QKE A RL A PG K Y LSV Q V V
Sbjct: 135 ITTPILLRLLESGVTFDQIVVMMQKEVAERLAADPGSKAYGSLSVAVQYQMTVKLAFIVP 194
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVE--WDGFLRICFIRKNKTL 238
K F P P VDS++V + P V E + +R F ++ K+L
Sbjct: 195 KTVFVPQPNVDSAIVSLTRHVTPPAVATDEKVFARLVRGSFAQRRKSL 242
>gi|154151411|ref|YP_001405029.1| dimethyladenosine transferase [Methanoregula boonei 6A8]
gi|153999963|gb|ABS56386.1| dimethyladenosine transferase [Methanoregula boonei 6A8]
Length = 254
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 120/227 (52%), Gaps = 4/227 (1%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L + +E I A +K +V LEIGPG G LT+ LL+ G +V AVELD + EL
Sbjct: 7 QHFLIDKNAIERIAGCADVKEKEV-LEIGPGNGALTRALLDRGAIVHAVELDRILCDELA 65
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
RF L V GD K LP F++ V+N+PY SS +TF+LL F A++M+
Sbjct: 66 DRFFEEIQKGTLTVTHGDATKCPLPPFEMVVSNLPYSASSKITFRLL--DLGFSVAVLMY 123
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q+EFA R+ A G K RLS+ Q +A V + F P P+V S VV+I PR P
Sbjct: 124 QQEFAERMAAPAGTKDCGRLSIMVQTYATVQRCFTLPPACFSPKPQVHSMVVKIVPRPPI 183
Query: 216 PQVNPVE-WDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQAL 261
VN + + +R F + KT+ + R + + E R + AL
Sbjct: 184 FGVNDRKRYADVVRALFTHRRKTVRNGLRGSSGILAPEWTKRVIDAL 230
>gi|402309572|ref|ZP_10828565.1| dimethyladenosine transferase [Eubacterium sp. AS15]
gi|400372539|gb|EJP25483.1| dimethyladenosine transferase [Eubacterium sp. AS15]
Length = 287
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 127/236 (53%), Gaps = 16/236 (6%)
Query: 15 SGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
S G+ + G KS GQ+ L N +++ I++ A I S DV+LEIG G G LT++L
Sbjct: 7 SSKITGEIIKKYGFKMTKSLGQNFLINENILDKIIESADISSDDVVLEIGTGIGTLTQRL 66
Query: 75 LEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD----LPYFDI-----C 125
E K VIAVE+D ++ L + Y N + +I D+LKTD L I
Sbjct: 67 CENAKKVIAVEIDRNLIPILNETLSN--YDN-ITIINKDILKTDINEELKNLSINQKIKV 123
Query: 126 VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARV 185
VAN+PY I++P+ K+L + C ++M QKE A R+ A P K Y LS+ Q +
Sbjct: 124 VANLPYYITTPIIMKVLEDKVNVDCMVLMLQKEVAERMNASPSTKDYGSLSIAVQYYCDT 183
Query: 186 SHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTL 238
+ + KV K++F P P VDS V+++ + R +V+ D F +I F ++ KT+
Sbjct: 184 AIVCKVPKSSFIPEPNVDSLVLKLVVNEKR-KVDISNEDLFFKIVRGSFSKRRKTI 238
>gi|434399399|ref|YP_007133403.1| Ribosomal RNA small subunit methyltransferase A [Stanieria
cyanosphaera PCC 7437]
gi|428270496|gb|AFZ36437.1| Ribosomal RNA small subunit methyltransferase A [Stanieria
cyanosphaera PCC 7437]
Length = 284
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 130/243 (53%), Gaps = 23/243 (9%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
+K GQH L++ + + IV A + S+D ILEIGPGTG LT++LL + ++AVE+D +
Sbjct: 16 NKRFGQHWLRSEIALNQIVAAAQLTSSDRILEIGPGTGILTRRLLPLVESLVAVEIDRNL 75
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFK 140
Q+ Q + ++QGD LK +L P F + VANIPY I+ P+ K
Sbjct: 76 C---QKLTQKLGKEDNFLLLQGDFLKLNLTELLESFPSFQQPNKIVANIPYNITGPILEK 132
Query: 141 LL--FHQP---AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL QP A++ +++ Q+E RL A PG K Y LS+ Q A + V
Sbjct: 133 LLGKISQPATTAYQSIVLLVQQEVGERLTASPGTKAYGALSLRVQYLASCELIYHVPAKA 192
Query: 196 FRPPPKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNK----TLSSIFRLKNVLSM 250
F PPPKVDS V+R+ PR P NP D +++ F + K LSS+ +++ +
Sbjct: 193 FSPPPKVDSVVIRLHPRTISEPADNPRLLDSLIKLGFANRRKMLRNNLSSVIAPDDLIQL 252
Query: 251 LEK 253
LE+
Sbjct: 253 LEQ 255
>gi|227509274|ref|ZP_03939323.1| dimethyladenosine transferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227512287|ref|ZP_03942336.1| dimethyladenosine transferase [Lactobacillus buchneri ATCC 11577]
gi|227084462|gb|EEI19774.1| dimethyladenosine transferase [Lactobacillus buchneri ATCC 11577]
gi|227191272|gb|EEI71339.1| dimethyladenosine transferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 301
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 131/240 (54%), Gaps = 22/240 (9%)
Query: 15 SGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKK 73
+ P + Q L +S KS GQ+ L + ++ +IV+ A + D ++EIGPG G LT++
Sbjct: 13 ASPARTQAILNRYRLSAKKSLGQNFLIDLNILNNIVEAAELTKNDNVIEIGPGIGGLTEQ 72
Query: 74 LLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--------- 124
L +A V+A E+D +++ L +PY+N +++I D+LK +LP
Sbjct: 73 LAKAANQVLAFEIDEKLLPVLDETL--SPYNN-IEIINQDILKANLPEVVAKRFRTDKPL 129
Query: 125 -CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
VAN+PY I++P+ LL + F ++M QKE A RL A+PG K Y LSV Q
Sbjct: 130 KVVANLPYYITTPIVMDLLANPVKFESIVVMMQKEVAERLDAKPGTKPYGSLSVIVQQQN 189
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWD-----GFLRICFIRKNKTL 238
V V K F P PKVDS++V++ P+ QV+ +D GF+R CF+ + KTL
Sbjct: 190 DVDISFVVPKTAFIPQPKVDSAIVKLSPKM---QVDKRPFDHKKFVGFVRGCFMHQRKTL 246
>gi|423399550|ref|ZP_17376746.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-1]
gi|423410242|ref|ZP_17387389.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-3]
gi|401643606|gb|EJS61302.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-1]
gi|401649051|gb|EJS66641.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-3]
Length = 292
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHADIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PYSN + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYSN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|325955928|ref|YP_004286538.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus acidophilus 30SC]
gi|385816825|ref|YP_005853215.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Lactobacillus
amylovorus GRL1118]
gi|325332493|gb|ADZ06401.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus acidophilus 30SC]
gi|327182763|gb|AEA31210.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus amylovorus GRL1118]
Length = 294
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 128/226 (56%), Gaps = 19/226 (8%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ A I+ D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDQAAILGIVESADIQPGDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P R K+I DVLK + +FD+ VAN+PY I++P+
Sbjct: 86 EILHNELPKKIGDAPLDERFKLILKDVLKANFEEDLAVFFDMSKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL A+PG+K Y L+++ Q V L+V ++F
Sbjct: 146 IFALAESDLHFASLTLMMQKEVAERLEAKPGNKEYGPLTISVQTEMNVKLALEVKSSSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE---WDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P +P +N + W +++CF ++ KTL++
Sbjct: 206 PRPKVDSAVVVLTPLAEKPAINDRKHFIW--VVKMCFSQRRKTLNN 249
>gi|296111672|ref|YP_003622054.1| dimethyladenosine transferase [Leuconostoc kimchii IMSNU 11154]
gi|339491061|ref|YP_004705566.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Leuconostoc sp. C2]
gi|295833204|gb|ADG41085.1| dimethyladenosine transferase [Leuconostoc kimchii IMSNU 11154]
gi|338852733|gb|AEJ30943.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Leuconostoc sp. C2]
Length = 295
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 125/236 (52%), Gaps = 15/236 (6%)
Query: 15 SGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKK 73
+ P + Q L G+ K GQ+ L + ++ IV AGI D ++EIGPG G LT++
Sbjct: 8 ADPMRTQAILNTYGLHAKKKFGQNFLTDLTVLHGIVDIAGITDQDYVIEIGPGIGALTEQ 67
Query: 74 LLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC-------- 125
L A K V+A E+D++MV L Q PY N +KVI GD+L +LP
Sbjct: 68 LARAAKKVVAFEIDTQMVDVLSETLQ--PYDN-VKVINGDILDINLPEVIRAEFGEEAHV 124
Query: 126 --VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
VAN+PY I++P+ +LL A+ ++M Q+E A RL A+ G K Y L++ Q A
Sbjct: 125 KVVANLPYYITTPILMQLLRTNIAWDNIVVMMQREVAERLNAEVGTKAYGVLTLIIQYFA 184
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
+ ++V +F P P VDS+VV++ P P V P G ++ F + K+L
Sbjct: 185 QAELAIEVSAASFNPAPNVDSAVVKLTPLSPELVVAQPERLFGVIKGSFSHRRKSL 240
>gi|359457348|ref|ZP_09245911.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Acaryochloris sp. CCMEE 5410]
Length = 269
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 119/220 (54%), Gaps = 15/220 (6%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K QH LK+ ++ I+ A I+ D ILEIGPG G LT++LL + V++VELD +
Sbjct: 5 RKRFAQHWLKSQAVLRQIIAAAKIQGCDRILEIGPGRGVLTRELLAQAQSVVSVELDRDL 64
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFH 144
L+ F +++ D L D+ P + VANIPY I+SP+ KLL
Sbjct: 65 CKSLRHTFND---QENFTLLELDFLNLDVAAELAEPLPNKVVANIPYNITSPILSKLLGR 121
Query: 145 -----QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
QP + +++ QKE A RLVA+PG K++ LSV +Q A + V + F+P
Sbjct: 122 IDAPAQPVYETVVLLIQKEVADRLVAEPGSKIFNGLSVRSQYLADCELICPVPASAFKPA 181
Query: 200 PKVDSSVVRIEPR-KPRPQVNPVEWDGFLRICFIRKNKTL 238
PKV+S+VVR+ PR P+P NP L++ F + K L
Sbjct: 182 PKVESAVVRLTPRLYPQPAQNPQWLSTLLKVGFSSRRKML 221
>gi|384261514|ref|YP_005416700.1| Dimethyladenosine transferase [Rhodospirillum photometricum DSM
122]
gi|378402614|emb|CCG07730.1| Dimethyladenosine transferase [Rhodospirillum photometricum DSM
122]
Length = 258
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 106/190 (55%), Gaps = 8/190 (4%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVELDSRM 90
+ G++ L + L I + AG ++EIGPG G LT+ LL G + VIA+E D R
Sbjct: 4 RRWGKNFLFDLNLTGRIARAAGALDQGSVIEIGPGPGGLTRALLAHGAREVIAIERDPRC 63
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC----VANIPYQISSPLTFKLLFHQP 146
+ L Q+ P RL VIQGD L D+ + VAN+PY +++PL L H
Sbjct: 64 LGALAEIDQACP--GRLSVIQGDALSVDVAHLGEAPRRIVANLPYNVATPLLLGWLKHAT 121
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
AF C ++MFQKE RL A+P K Y RLSV TQ RV+ +V F PPP V S+V
Sbjct: 122 AFECLVLMFQKEVVDRLAARPDTKDYGRLSVITQWLCRVTPQFEVHPKAFVPPPAVTSTV 181
Query: 207 VRIEPRKPRP 216
VR++PR P P
Sbjct: 182 VRLDPR-PEP 190
>gi|448630304|ref|ZP_21672959.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula vallismortis ATCC 29715]
gi|445756227|gb|EMA07602.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula vallismortis ATCC 29715]
Length = 285
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 114/213 (53%), Gaps = 6/213 (2%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
+ QH L + +++ I A D+ +LEIG G G LT +LL A V AVE D
Sbjct: 26 QDQHFLVDDRVLDRIPGYATDAGVDLSHVLEIGAGPGALTDRLLAAADRVTAVERDPDFA 85
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+ F + RL V++GD L+ DLP F ++N+PY SS + F++L Q R
Sbjct: 86 AHLREEFADEVAAGRLTVVEGDALEVDLPEFTASISNLPYGASSEIAFRVLPEQ---RPL 142
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++MFQ+EFA R+ A+P Y RLSV +A V + V F P P+V S++VR P
Sbjct: 143 LLMFQQEFAERMAAEPATDDYGRLSVTAGHYADVEIVETVPPEAFDPQPRVTSALVRTTP 202
Query: 212 RKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
R+P V + + FL+ F ++ KT+ + R
Sbjct: 203 RQPDYTVPSDDFFMDFLKAVFTQRRKTMRNAVR 235
>gi|389578474|ref|ZP_10168501.1| dimethyladenosine transferase [Desulfobacter postgatei 2ac9]
gi|389400109|gb|EIM62331.1| dimethyladenosine transferase [Desulfobacter postgatei 2ac9]
Length = 283
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 122/228 (53%), Gaps = 8/228 (3%)
Query: 18 YQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA 77
+ G+ L G+ K GQ+ L +P + IV+K G+ +LEIGPG G +T L +
Sbjct: 3 HPGELLKKSGLYAGKELGQNFLSHPTTAQMIVEKTGVDKETTVLEIGPGLGAITLPLARS 62
Query: 78 GKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD-----ICVANIPYQ 132
K V+AVE D R++ L+ N + +I D+LKTD+ + + N+PY
Sbjct: 63 CKQVVAVEKDRRIIPLLEEELAGEGICN-VTIINQDILKTDIREIAGTEKLVVIGNLPYN 121
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
ISS + FKL+ + A +MFQKE A RL++ G K Y RLS Q +++S + +G
Sbjct: 122 ISSQILFKLVTIRQVVTRAFLMFQKELAQRLLSSAGTKDYSRLSAVVQYASKISRVADIG 181
Query: 193 KNNFRPPPKVDSSVVRIE--PRKPRPQVNPVEWDGFLRICFIRKNKTL 238
NNF P P+V+S+V+R + K + + + ++ F ++ KTL
Sbjct: 182 PNNFFPRPEVNSTVLRFDFFETKGMGEADEILLFSVIKAAFSKRRKTL 229
>gi|58336557|ref|YP_193142.1| dimethyladenosine transferase [Lactobacillus acidophilus NCFM]
gi|227903108|ref|ZP_04020913.1| dimethyladenosine transferase [Lactobacillus acidophilus ATCC 4796]
gi|62900454|sp|Q5FMG3.1|RSMA_LACAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|58253874|gb|AAV42111.1| dimethyladenosine transferase [Lactobacillus acidophilus NCFM]
gi|227869094|gb|EEJ76515.1| dimethyladenosine transferase [Lactobacillus acidophilus ATCC 4796]
Length = 294
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 137/247 (55%), Gaps = 21/247 (8%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ A I+ D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDQDAILGIVEAADIQPGDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ ++R K++ DVLK D +FD+ VAN+PY I++P+
Sbjct: 86 EILHNELPKKIGEQSLNDRFKLLLKDVLKADFQNDLAGFFDMKQPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL A+PG+K Y L+++ Q V L+V +F
Sbjct: 146 IFALSESDLHFSSLTLMMQKEVAERLEAKPGNKEYGPLTISVQTEMNVKIALEVKSTSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYR 256
P PKVDSSVV + P + RP++ N + +++CF ++ KTL+ N L L N +
Sbjct: 206 PRPKVDSSVVVLTPLQERPKIENRKHFIWVVKMCFSQRRKTLN------NNLKALIPNAK 259
Query: 257 TLQALQS 263
+AL S
Sbjct: 260 EREALIS 266
>gi|222056012|ref|YP_002538374.1| dimethyladenosine transferase [Geobacter daltonii FRC-32]
gi|221565301|gb|ACM21273.1| dimethyladenosine transferase [Geobacter daltonii FRC-32]
Length = 275
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 126/226 (55%), Gaps = 13/226 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I KS GQ+ L + ++ IV+ ++ +D +LEIGPG G LT L++ + V+AVELD
Sbjct: 4 IRAKKSMGQNFLVDGNVLSRIVEAVVLEPSDRVLEIGPGRGALTSLLVKRAEQVLAVELD 63
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF--------DICVANIPYQISSPLTF 139
++V L++ F ++ ++ IQGD+LK +LP AN+PY ISS + F
Sbjct: 64 RQLVPLLEKEFSG---ADNVEFIQGDILKIELPEVLGSRWNGRWKVAANLPYNISSQVIF 120
Query: 140 KLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
K L + F I+M QKE RL+A PG K Y LSV LH +S +L V +FRP
Sbjct: 121 KFLDNVSLFSSLILMLQKEVGDRLIASPGTKEYGILSVFCNLHFNISRVLIVKPGSFRPI 180
Query: 200 PKVDSSVVRIEP-RKPRPQV-NPVEWDGFLRICFIRKNKTLSSIFR 243
PKVDS V++ P PR V + + ++ F ++ KTL++ R
Sbjct: 181 PKVDSVVLKFVPLAAPRQDVGDETLFRQVVKASFSQRRKTLANCLR 226
>gi|163938049|ref|YP_001642933.1| dimethyladenosine transferase [Bacillus weihenstephanensis KBAB4]
gi|423370770|ref|ZP_17348174.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD142]
gi|423456672|ref|ZP_17433522.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X1-1]
gi|423471689|ref|ZP_17448433.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-2]
gi|423490656|ref|ZP_17467338.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BtB2-4]
gi|423496396|ref|ZP_17473040.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER057]
gi|423496810|ref|ZP_17473427.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER074]
gi|423520181|ref|ZP_17496662.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA2-4]
gi|423520654|ref|ZP_17497127.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA4-10]
gi|423556962|ref|ZP_17533265.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MC67]
gi|423595318|ref|ZP_17571348.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD048]
gi|423597235|ref|ZP_17573235.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD078]
gi|423659640|ref|ZP_17634809.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM022]
gi|423671072|ref|ZP_17646101.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM034]
gi|423672705|ref|ZP_17647644.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM062]
gi|226729756|sp|A9VN54.1|RSMA_BACWK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|163860246|gb|ABY41305.1| dimethyladenosine transferase [Bacillus weihenstephanensis KBAB4]
gi|401073357|gb|EJP81782.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD142]
gi|401128419|gb|EJQ36109.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X1-1]
gi|401149126|gb|EJQ56605.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER057]
gi|401155446|gb|EJQ62856.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA2-4]
gi|401163991|gb|EJQ71331.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
CER074]
gi|401180550|gb|EJQ87708.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA4-10]
gi|401194041|gb|EJR01038.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MC67]
gi|401222244|gb|EJR28841.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD048]
gi|401239576|gb|EJR46001.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD078]
gi|401293903|gb|EJR99536.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM034]
gi|401304659|gb|EJS10209.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM022]
gi|401311437|gb|EJS16738.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VDM062]
gi|402429001|gb|EJV61092.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BtB2-4]
gi|402430787|gb|EJV62861.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-2]
Length = 292
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PYSN + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYSN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|344211287|ref|YP_004795607.1| dimethyladenosine transferase [Haloarcula hispanica ATCC 33960]
gi|343782642|gb|AEM56619.1| dimethyladenosine transferase [Haloarcula hispanica ATCC 33960]
Length = 285
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 112/213 (52%), Gaps = 6/213 (2%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
+ QH L + +++ I Q A D+ +LEIG G G LT +LL A + V A+E D
Sbjct: 26 QDQHFLVDDRVLDRIPQYATDADVDLSHVLEIGAGPGALTDRLLAAAETVTAIERDPDFA 85
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L F ++RL V++GD L LP F ++N+PY SS + F+LL Q R
Sbjct: 86 AHLHEEFAEEIAADRLTVVKGDALDIGLPEFTASISNLPYGASSEIAFRLLPEQ---RPL 142
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++MFQ+EFA R+ A P Y RLSV +A + V F P P+V S++VR P
Sbjct: 143 LLMFQREFAERMAADPATDDYGRLSVTAGHYADAEIVETVPPEAFDPQPRVTSALVRTTP 202
Query: 212 RKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
R+P V E + FL+ F ++ KT+ + R
Sbjct: 203 RQPDYTVPSDEFFMDFLKAVFTQRRKTMRNAVR 235
>gi|227894433|ref|ZP_04012238.1| dimethyladenosine transferase [Lactobacillus ultunensis DSM 16047]
gi|227863803|gb|EEJ71224.1| dimethyladenosine transferase [Lactobacillus ultunensis DSM 16047]
Length = 294
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 127/224 (56%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ A I+S D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDQNAILGIVEAANIQSGDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P R K+ DVLK + +FD+ VAN+PY I++P+
Sbjct: 86 EILHNELPKKIDGEPLEARFKLTLKDVLKANFEKDLTGFFDMGKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL A+PG+K Y L+++ Q V L+V +F
Sbjct: 146 IFVLAESDLHFTSLTLMMQKEVAERLEAKPGNKEYGPLTISVQTEMNVRLALEVKNTSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSS 240
P P+VDSSVV + P K +P + N + +++CF ++ KTL++
Sbjct: 206 PRPRVDSSVVVLTPLKDKPAIENRKHFIWVVKMCFSQRRKTLNN 249
>gi|47459399|ref|YP_016261.1| dimethyladenosine transferase [Mycoplasma mobile 163K]
gi|62900531|sp|Q6KH80.1|RSMA_MYCMO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|47458729|gb|AAT28050.1| dimethyladenosine transferase rRNA modification enzyme [Mycoplasma
mobile 163K]
Length = 254
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 138/238 (57%), Gaps = 10/238 (4%)
Query: 29 SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDS 88
+F KS GQ+ L++ ++E IV +++ DV LEIGPG G LT L++ K V+A E+D
Sbjct: 4 NFKKSLGQNFLQDKNIIEKIVNFIPLENEDV-LEIGPGQGALTNLLVKKSKNVLAYEIDK 62
Query: 89 RMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD--ICVANIPYQISSPLTFKLLFHQP 146
++ L+ + ++ ++ + D LK+++ + D I +ANIPY I+S + FK+ +
Sbjct: 63 ELIPFLKEKIKAKNFTLK----HEDFLKSEIDFQDKKIIIANIPYFITSDILFKIFENHK 118
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
F A+IM QKE A +L+A+ D Y +LSV++Q A + ++ V + F P P VDS+V
Sbjct: 119 FFTKALIMVQKEIADKLIAKANDSNYGKLSVSSQFFANIKKVINVPRTCFYPQPNVDSAV 178
Query: 207 VRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSS 264
V E + ++ ++ F++ CF ++ K LS+ LKNV LEK L+ L S
Sbjct: 179 VYFEFKNDIENIDIEKFLVFIKTCFSQQRKKLSN--NLKNVYD-LEKIKSVLKKLNLS 233
>gi|423399639|ref|ZP_17376812.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-2]
gi|423461696|ref|ZP_17438492.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X2-1]
gi|423480183|ref|ZP_17456895.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-1]
gi|401135358|gb|EJQ42957.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5X2-1]
gi|401658245|gb|EJS75742.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG2X1-2]
gi|402423686|gb|EJV55892.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-1]
Length = 292
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PYSN + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYSN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|315037470|ref|YP_004031038.1| dimethyladenosine transferase [Lactobacillus amylovorus GRL 1112]
gi|312275603|gb|ADQ58243.1| dimethyladenosine transferase [Lactobacillus amylovorus GRL 1112]
Length = 294
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 128/226 (56%), Gaps = 19/226 (8%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + IV+ A I+ D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDQAAILGIVESAYIQPGDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ P R K+I DVLK + +FD+ VAN+PY I++P+
Sbjct: 86 EILHNELPKKIGDAPLDERFKLILKDVLKANFEEDLAGFFDMSKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL A+PG+K Y L+++ Q V L+V ++F
Sbjct: 146 IFALAESDLHFASLTLMMQKEVAERLEAKPGNKEYGPLTISVQTEMNVKLALEVKSSSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE---WDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P +P +N + W +++CF ++ KTL++
Sbjct: 206 PRPKVDSAVVVLTPLAEKPAINDRKHFIW--VVKMCFSQRRKTLNN 249
>gi|423513025|ref|ZP_17489555.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA2-1]
gi|402446373|gb|EJV78233.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuA2-1]
Length = 292
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PYSN + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYSN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|306820341|ref|ZP_07453980.1| dimethyladenosine transferase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304551670|gb|EFM39622.1| dimethyladenosine transferase [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 287
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 126/236 (53%), Gaps = 16/236 (6%)
Query: 15 SGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
S G+ + G KS GQ+ L N +++ I++ A I S DV+LEIG G G LT++L
Sbjct: 7 SSKITGEIIKKYGFKMTKSLGQNFLINENILDKIIESADISSDDVVLEIGTGIGTLTQRL 66
Query: 75 LEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD----LPYFDI-----C 125
E K VIAVE+D ++ L + Y N + +I D+LKTD L I
Sbjct: 67 CENAKKVIAVEIDRNLIPILNETLSN--YDN-ITIINKDILKTDINEELKNLSINQKIKV 123
Query: 126 VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARV 185
VAN+PY I++P+ K+L + C ++M QKE A R+ A P K Y LS+ Q +
Sbjct: 124 VANLPYYITTPIIMKVLEDKVNVDCMVLMLQKEVADRMNASPSTKDYGSLSIAVQYYCDT 183
Query: 186 SHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTL 238
+ + KV K++F P P VDS V+++ + R V+ D F +I F ++ KT+
Sbjct: 184 AIVCKVPKSSFIPEPNVDSLVLKLVVNEKR-NVDISNEDLFFKIVRGSFSKRRKTI 238
>gi|423485293|ref|ZP_17461980.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-2]
gi|401135870|gb|EJQ43466.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6X1-2]
Length = 292
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDYAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PYSN + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYSN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|158334916|ref|YP_001516088.1| dimethyladenosine transferase [Acaryochloris marina MBIC11017]
gi|189028799|sp|B0CC89.1|RSMA_ACAM1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|158305157|gb|ABW26774.1| dimethyladenosine transferase [Acaryochloris marina MBIC11017]
Length = 269
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 119/220 (54%), Gaps = 15/220 (6%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K QH LK+ ++ I+ A I+ D ILEIGPG G LT++LL + V++VELD +
Sbjct: 5 RKRFAQHWLKSQAVLRQIIAAAKIQGCDRILEIGPGRGVLTRELLAQAQSVVSVELDRDL 64
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFH 144
L+ F +++ D L D+ P + VANIPY I+SP+ KLL
Sbjct: 65 CKSLRHTFND---QENFTLLELDFLNLDVAAELTEPLPNKVVANIPYNITSPILSKLLGR 121
Query: 145 -----QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
QP + +++ QKE A RLVA+PG K++ LSV +Q A + V + F+P
Sbjct: 122 IDAPAQPVYETVVLLIQKEVADRLVAEPGSKIFNGLSVRSQYLADCELICPVPASAFKPA 181
Query: 200 PKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTL 238
PKV+S+VVR+ PR P+P NP L++ F + K L
Sbjct: 182 PKVESAVVRLTPRPYPQPVQNPQWLSTLLKVGFSSRRKML 221
>gi|340383183|ref|XP_003390097.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
[Amphimedon queenslandica]
Length = 324
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
G + K GQH LK+P ++E I+ + ++ + I+EIGPG G LT+ LL +G + A+E
Sbjct: 47 GMLRARKRFGQHFLKDPAVIERIIDEIDPRAGEHIVEIGPGQGALTRPLLASGCTLHAIE 106
Query: 86 LDSRMVLELQRRFQ-------------STPYSNRLKVIQGDVLKTDL-----PYFDICVA 127
+D + LQRR P R + D L+ D P I V
Sbjct: 107 IDRDLAAALQRRLGEAIDPPDPSGKKGCAPVDGRFFLHLADALEFDFTALAPPPLRI-VG 165
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PY IS+P+ FKLL P+ +M QKE RL A PG+K + RL + Q+
Sbjct: 166 NLPYNISTPILFKLLASLPSIEDMHLMLQKEVVERLTALPGNKAWGRLGLMLQIDCEPEP 225
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVE---WDGFLRICFIRKNKTL 238
L V + F P PKV+SSVVR+ P PRP+++P + + CF ++ K L
Sbjct: 226 LFTVESDAFTPAPKVESSVVRLTP-HPRPRLDPETKECLEAIAKACFSKRRKML 278
>gi|390441516|ref|ZP_10229581.1| Ribosomal RNA small subunit methyltransferase A [Microcystis sp.
T1-4]
gi|389835156|emb|CCI33707.1| Ribosomal RNA small subunit methyltransferase A [Microcystis sp.
T1-4]
Length = 268
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 126/243 (51%), Gaps = 19/243 (7%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH LK+ +++ I+ A ++S D +LEIGPGTG LT++LL+ ++V+AVE+D
Sbjct: 3 IQPRKRFGQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEID 62
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLL-- 142
+ L ++F + +I GD L LP + VANIPY I+ P+ KLL
Sbjct: 63 RDLWTILNKKFGQ---QDNFHLIPGDFLSLKPEQLPPVNKVVANIPYNITGPILEKLLGS 119
Query: 143 ---FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
P ++ ++ QKE A RLVA P K Y LSV Q A + V + F PP
Sbjct: 120 IAHPFTPPYQSITLLVQKEVAERLVAVPSSKAYSALSVRIQYLADCQWICDVPRRAFSPP 179
Query: 200 PKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIF-------RLKNVLSML 251
P+VDS+V+++ PR P NP + F + K L + RL +L+ L
Sbjct: 180 PQVDSAVIQLLPRVLPNNVSNPAFLSTLISWGFANRRKMLRNNLKNCLDSDRLSQILTQL 239
Query: 252 EKN 254
E N
Sbjct: 240 EIN 242
>gi|121534378|ref|ZP_01666202.1| dimethyladenosine transferase [Thermosinus carboxydivorans Nor1]
gi|121307148|gb|EAX48066.1| dimethyladenosine transferase [Thermosinus carboxydivorans Nor1]
Length = 283
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 122/226 (53%), Gaps = 14/226 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI K GQ+ L + +V+ IV A +K + +LEIGPG G LT+ L EAG V AVEL
Sbjct: 20 GIQMSKKLGQNFLVDEQVVDGIVAAAAVKPGEAVLEIGPGIGTLTQGLAEAGANVTAVEL 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSPLTFK 140
D +++ L + Y N +++I GD+L+ D+ F + +AN+PY I++P+ +
Sbjct: 80 DRQLLDVLAKTLAG--YDN-VRIIHGDILRIDISREIRAEKFKV-IANLPYYITTPIIMR 135
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL + + M QKE A R+VA PG K Y LSV Q + + + V F P P
Sbjct: 136 LLEERLPVELMVTMVQKEVAERMVAAPGSKDYGALSVAVQFYTQPEIMFVVPPQAFIPAP 195
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
V+S+V+R R P V+ + F R+ F ++ KTL++ +
Sbjct: 196 AVESAVIRCRVRSA-PPVSVTDEKAFFRVVKAAFAQRRKTLANALK 240
>gi|452995111|emb|CCQ93252.1| dimethyladenosine 16S ribosomal RNA transferase [Clostridium
ultunense Esp]
Length = 289
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 123/233 (52%), Gaps = 12/233 (5%)
Query: 15 SGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
S Y + L G F KS GQ+ L + +V I Q+ I D +LEIGPG G LT++L
Sbjct: 8 SPKYIREILDKYGFEFSKSLGQNFLIDGNIVRKIGQEGNITKEDYVLEIGPGIGTLTEEL 67
Query: 75 LEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD---------IC 125
K V+AVELD ++ L + P +++I GD+L+ D+
Sbjct: 68 ALNAKKVVAVELDKSLLPILDETLRDYP---NIEIIHGDILRVDINRLIEEKMAGGPIKV 124
Query: 126 VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARV 185
VAN+PY +++P+ KL+ IIM QKE A R+VA PG K Y LSV + + +
Sbjct: 125 VANLPYYVTTPIIAKLIEEDLNIESIIIMIQKEVAHRIVASPGSKQYGSLSVFVKFYTQP 184
Query: 186 SHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
L+ V K F P PKVDS+V+R+ ++ P+++ + ++ F ++ KT+
Sbjct: 185 EILIPVPKTVFMPQPKVDSAVIRLNIKRDLPEIDREIFFQVVKAAFSKRRKTI 237
>gi|55377170|ref|YP_135020.1| dimethyladenosine transferase [Haloarcula marismortui ATCC 43049]
gi|62900484|sp|Q5V588.1|RSMA_HALMA RecName: Full=Probable ribosomal RNA small subunit
methyltransferase A; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName:
Full=S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
dimethyltransferase
gi|55229895|gb|AAV45314.1| dimethyladenosine transferase [Haloarcula marismortui ATCC 43049]
Length = 285
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 6/213 (2%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
+ QH L + +++ I + A D+ +LEIG G G LT +LL + V AVE D
Sbjct: 26 QDQHFLVDDRVLDRIPEYATDADIDLSHVLEIGAGPGALTDRLLATAERVTAVERDPDFA 85
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+ F ++RL +++GD L+ DLP F ++N+PY SS + F+LL Q R
Sbjct: 86 AHLREEFTEEVAADRLTIVEGDALEVDLPDFTASISNLPYGASSEIAFRLLPEQ---RPL 142
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++MFQ+EFA R+ A P Y RLSV +A V + V F P P+V S++VR P
Sbjct: 143 LLMFQQEFAERMAADPATDDYGRLSVTAGHYADVEVVETVPPEAFDPQPRVTSALVRTMP 202
Query: 212 RKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
R P V + + FL+ F ++ KT+ + R
Sbjct: 203 RTPDYTVPSDDFFMDFLKAVFTQRRKTMRNAVR 235
>gi|227548244|ref|ZP_03978293.1| dimethyladenosine transferase [Corynebacterium lipophiloflavum DSM
44291]
gi|227079667|gb|EEI17630.1| dimethyladenosine transferase [Corynebacterium lipophiloflavum DSM
44291]
Length = 284
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 128/239 (53%), Gaps = 17/239 (7%)
Query: 16 GPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
GP + L + G++ K GQ+ + +P V IV A + + DV++E+GPG G+LT L
Sbjct: 8 GPVEVHQLASELGVTPTKKLGQNFVHDPNTVRRIVAAAKLNADDVVVEVGPGLGSLTLGL 67
Query: 75 LEAGKMVIAVELDSRMVLELQRRFQ--STPYSNRLKVIQGDVLK---TDLPYFDIC-VAN 128
+++ V+A+E+D R+ L R + + ++ RL+V+ D L+ +D+ + VAN
Sbjct: 68 VDSVSHVVALEIDPRLAGRLARTVEERADAFATRLEVVCADALRVRRSDVSHAPTALVAN 127
Query: 129 IPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL 188
+PY +S P+ LL P R ++M QKE A RL A+PG K+Y SV + RV+
Sbjct: 128 LPYNVSVPVLLHLLEEFPTIRRVLVMVQKEVADRLAAEPGSKIYGVPSVKAAFYGRVTRA 187
Query: 189 LKVGKNNFRPPPKVDSSVVRIE-----PRKPRPQVNPVEWDGFLRICFIRKNKTLSSIF 242
+GKN F P P ++S +VRI+ R R V P + F ++ KTL S
Sbjct: 188 GTIGKNVFWPAPNIESGLVRIDVDPKVDRTLRASVFP-----LVDAAFAQRRKTLRSTL 241
>gi|254416619|ref|ZP_05030370.1| dimethyladenosine transferase [Coleofasciculus chthonoplastes PCC
7420]
gi|196176585|gb|EDX71598.1| dimethyladenosine transferase [Coleofasciculus chthonoplastes PCC
7420]
Length = 283
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 120/224 (53%), Gaps = 19/224 (8%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
HK QH L++ + I+ A ++ D +LEIGPGTG LT++LL + ++AVE+D +
Sbjct: 6 HKQFAQHWLRSEKALNQIITAAKLQPRDRLLEIGPGTGVLTRRLLGEVESLVAVEIDRDL 65
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFK 140
QR +S + ++QGD+L +L P+F + VANIPY I+ P+
Sbjct: 66 C---QRLVKSLGQNENFLLLQGDILSLNLAEHLAAFPHFQSPNKVVANIPYNITGPILQT 122
Query: 141 LLFH-----QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL PAF +++ QKE A RL A+PG K + LSV Q A + V
Sbjct: 123 LLGTIAQPITPAFELIVLLVQKEVAQRLCAKPGSKAFGALSVRVQYLADCDWICDVPAIA 182
Query: 196 FRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTL 238
F PPPKVDS+VVR+ PR P NP + + +++ F K K L
Sbjct: 183 FSPPPKVDSAVVRLRPRIVDPSADNPQQLETLVKLGFASKRKML 226
>gi|83591771|ref|YP_425523.1| dimethyladenosine transferase [Rhodospirillum rubrum ATCC 11170]
gi|386348460|ref|YP_006046708.1| dimethyladenosine transferase [Rhodospirillum rubrum F11]
gi|119365056|sp|Q2RXA9.1|RSMA_RHORT RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|83574685|gb|ABC21236.1| dimethyladenosine transferase [Rhodospirillum rubrum ATCC 11170]
gi|346716896|gb|AEO46911.1| dimethyladenosine transferase [Rhodospirillum rubrum F11]
Length = 288
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 107/195 (54%), Gaps = 8/195 (4%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVE 85
G+ +S GQ+ L + L I + G ++EIGPG G LT+ LL AG + VIA+E
Sbjct: 27 GLDARRSLGQNFLFDLNLTGRIARAGGEIDQGTVIEIGPGPGGLTRALLGAGARRVIAIE 86
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC----VANIPYQISSPLTFKL 141
DSR L + + RL+ I+GD L D+ +AN+PY +++PL
Sbjct: 87 RDSRCRGVLAE--IAAVWPGRLETIEGDALDIDVAALGEAPRRVIANLPYNVATPLLIGW 144
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L H AF ++MFQKE RL A+PG K Y RLSV TQ V L V F PPPK
Sbjct: 145 LRHASAFERFVLMFQKEVVDRLAARPGTKDYGRLSVITQWLCEVRPLFDVNPRAFTPPPK 204
Query: 202 VDSSVVRIEPRKPRP 216
V S+VVRI+PR P+P
Sbjct: 205 VVSTVVRIDPR-PQP 218
>gi|403047718|ref|ZP_10903176.1| dimethyladenosine transferase [Staphylococcus sp. OJ82]
gi|402762459|gb|EJX16563.1| dimethyladenosine transferase [Staphylococcus sp. OJ82]
Length = 296
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 129/234 (55%), Gaps = 17/234 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L + +++ I+ + I I+EIGPG G+LT++L + K V+
Sbjct: 16 LNQYGFNFKKSLGQNFLIDVNIIQKIIDASDIGENTGIIEIGPGMGSLTEQLAKNAKKVV 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF----------DICVANIPYQ 132
A E+D R++ L+ PY N +++I D+LK D+ ++ + VAN+PY
Sbjct: 76 AFEIDQRLIPVLKDTMG--PYDN-VEIINKDILKADIAHYVTEHLADCDNIMVVANLPYY 132
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ L+ ++M QKE RL AQ G K Y LS+ TQ + S +L V
Sbjct: 133 ITTPILLNLMQQTLPIDGYVVMMQKEVGERLNAQVGTKAYGSLSIVTQYYTETSKVLTVP 192
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
K F PPP VDS VV++ R+ P+V+ D F ++ F ++ KT+S+ ++
Sbjct: 193 KTVFLPPPNVDSIVVKLMKRQ-TPEVDIDNEDKFFKMTKAAFSQRRKTISNNYQ 245
>gi|229551483|ref|ZP_04440208.1| dimethyladenosine transferase [Lactobacillus rhamnosus LMS2-1]
gi|258540770|ref|YP_003175269.1| dimethyladenosine transferase [Lactobacillus rhamnosus Lc 705]
gi|385836481|ref|YP_005874256.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 8530]
gi|229315166|gb|EEN81139.1| dimethyladenosine transferase [Lactobacillus rhamnosus LMS2-1]
gi|257152446|emb|CAR91418.1| Dimethyladenosine transferase [Lactobacillus rhamnosus Lc 705]
gi|355395973|gb|AER65403.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 8530]
Length = 294
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 115/225 (51%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L +P +++ IV A + D ++EIGPG G LT+ L + V+A+E+
Sbjct: 19 GFHMRKGLGQNFLTDPQILQKIVAAADVSEQDDVIEIGPGIGALTQFLADQAHQVVALEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKT+L +FD VAN+PY I++P
Sbjct: 79 DDRLLPILAETLADYPNTT---VVNEDVLKTNLTELVATHFDGNHTLKVVANLPYYITTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 136 ILLHLLRAHLPLHSMTVMMQKEVAARLSATPGSKDYGSLSIAVQLVADVATAFTVSRHAF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQV---NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R P P NP +D +R F + KTL
Sbjct: 196 VPAPNVDSAIVTLTQR-PEPLAAVKNPDSFDRLVRGAFASRRKTL 239
>gi|297566999|ref|YP_003685971.1| dimethyladenosine transferase [Meiothermus silvanus DSM 9946]
gi|296851448|gb|ADH64463.1| dimethyladenosine transferase [Meiothermus silvanus DSM 9946]
Length = 276
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 118/222 (53%), Gaps = 15/222 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ K GQ+ L ++ IV G K + + E+GPG G LT+ L EAG V AVE+
Sbjct: 24 GLRADKRFGQNFLVEAGYLQRIVAAVGFKPGERVYEVGPGLGTLTRALAEAGAKVTAVEM 83
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD---LPYFDICVANIPYQISSPLTFKLLF 143
D R+ P ++VI GD L+ D +P + N+PY I++PL KLL
Sbjct: 84 DRRLEPVHAETLAHLP----VEVIWGDALEFDWRSIPPGSLFAGNLPYNIATPLITKLLL 139
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
+ FRC +++ QKE A+R+VA PG Y LS+ Q H++ L + F PPPKV
Sbjct: 140 SR-RFRCIVVLVQKEVALRMVAAPGTPEYGVLSLRIQHHSQARRLFDLPPGVFLPPPKVT 198
Query: 204 SSVVRIEPRKPRPQVNPVEWDGF--LRICFIRKNKTLSSIFR 243
SS+VR+E P NP + + F + F ++ KTLS+ +
Sbjct: 199 SSLVRLE-----PNANPDDPELFRLIEAAFAQRRKTLSNALK 235
>gi|423376684|ref|ZP_17353968.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1O-2]
gi|423548754|ref|ZP_17525112.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB5-5]
gi|423621439|ref|ZP_17597217.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD148]
gi|401174285|gb|EJQ81496.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB5-5]
gi|401263468|gb|EJR69593.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD148]
gi|401641323|gb|EJS59043.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1O-2]
Length = 292
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PYSN + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYSN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVTNETFFFEVVRASFAQRRKT 237
>gi|423439778|ref|ZP_17416684.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X2-1]
gi|423450061|ref|ZP_17426940.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5O-1]
gi|423462850|ref|ZP_17439618.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-1]
gi|423532206|ref|ZP_17508624.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB2-9]
gi|423542523|ref|ZP_17518913.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB4-10]
gi|401127068|gb|EJQ34798.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG5O-1]
gi|401168319|gb|EJQ75584.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB4-10]
gi|402421821|gb|EJV54068.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X2-1]
gi|402422978|gb|EJV55199.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG6O-1]
gi|402465284|gb|EJV96966.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB2-9]
Length = 292
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PYSN + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYSN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVTNETFFFEVVRASFAQRRKT 237
>gi|417838640|ref|ZP_12484878.1| dimethyladenosine transferase [Lactobacillus johnsonii pf01]
gi|338762183|gb|EGP13452.1| dimethyladenosine transferase [Lactobacillus johnsonii pf01]
Length = 296
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 126/224 (56%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + ++ IV+ A IK D ++EIGPG G+LT++LL AG V+A E+D +
Sbjct: 26 KNLGQNFLIDLAAIKGIVEAADIKPGDQVIEIGPGIGSLTEQLLLAGAKVLAYEVDQDLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ +R K++ DVLK + + D+ VAN+PY I++P+
Sbjct: 86 EILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDNDGFLDLSKSVKIVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L+ F +M QKE A RLVA+P K Y LS+ Q V +V +F
Sbjct: 146 IFNLIKSDLDFSSLTLMMQKEVAERLVAKPKTKEYGPLSIAVQSRMNVRLAEEVKSTSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P +P +N +D +++CF ++ KTL++
Sbjct: 206 PRPKVDSAVVVLTPLLEKPDINDYAFFDHVVKMCFAQRRKTLAN 249
>gi|423618776|ref|ZP_17594609.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD115]
gi|401252618|gb|EJR58874.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD115]
Length = 292
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PYSN + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYSN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVKVTNETFFFEVVRASFAQRRKT 237
>gi|226309677|ref|YP_002769571.1| dimethyladenosine transferase [Brevibacillus brevis NBRC 100599]
gi|226092625|dbj|BAH41067.1| dimethyladenosine transferase [Brevibacillus brevis NBRC 100599]
Length = 297
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 124/225 (55%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G +F KS GQ+ L + ++ +IV +A + +EIGPG G LT++L A K V+A+E+
Sbjct: 23 GFAFKKSLGQNFLIDTNILHNIVSEADLTKEKGAIEIGPGIGALTEQLGRAAKKVMAIEI 82
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD----------ICVANIPYQISSP 136
D R++ LQ +PY N ++V+ GDVL DL VAN+PY +++P
Sbjct: 83 DQRLLPILQDTL--SPYEN-IEVVHGDVLGLDLKKLIEEKMTGVEKLSVVANLPYYVTTP 139
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + ++M QKE A R+ A+PG K Y LSV Q +A + V + F
Sbjct: 140 ILMKLLEERLPLENIVVMIQKEVAERIAAKPGTKDYGSLSVAAQFYADTEVAMIVPASVF 199
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTL 238
P P VDS+V+R++ R RP V + D F R+ F ++ KTL
Sbjct: 200 IPRPNVDSAVIRLKVRD-RPPVEVDDQDVFFRVVRCSFAQRRKTL 243
>gi|418071100|ref|ZP_12708374.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus rhamnosus R0011]
gi|423080252|ref|ZP_17068877.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 21052]
gi|357538594|gb|EHJ22614.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Lactobacillus rhamnosus R0011]
gi|357543317|gb|EHJ25348.1| dimethyladenosine transferase [Lactobacillus rhamnosus ATCC 21052]
Length = 294
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 116/225 (51%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L +P +++ IV A + D ++EIGPG G LT+ L + V+A+E+
Sbjct: 19 GFHMRKGLGQNFLTDPQILQKIVAAADVSQQDDVIEIGPGIGALTQFLADQAHQVVALEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKT+L +FD VAN+PY I++P
Sbjct: 79 DDRLLPILAETLTDYPNTT---VVNEDVLKTNLTELVATHFDGKHTLKVVANLPYYITTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL + +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 136 ILLHLLQARLPLHSMTVMMQKEVAARLSATPGSKDYGSLSIAVQLVADVTTAFTVSRHAF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQV---NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R P P NP +D +R F + KTL
Sbjct: 196 VPAPNVDSAIVTLTQR-PEPLAAVKNPDSFDRLVRGAFASRRKTL 239
>gi|170017706|ref|YP_001728625.1| dimethyladenosine transferase [Leuconostoc citreum KM20]
gi|414596051|ref|ZP_11445627.1| Ribosomal RNA small subunit methyltransferase A [Leuconostoc
citreum LBAE E16]
gi|421877404|ref|ZP_16308951.1| Ribosomal RNA small subunit methyltransferase A [Leuconostoc
citreum LBAE C10]
gi|421878828|ref|ZP_16310305.1| Ribosomal RNA small subunit methyltransferase A [Leuconostoc
citreum LBAE C11]
gi|226732593|sp|B1N079.1|RSMA_LEUCK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|169804563|gb|ACA83181.1| Dimethyladenosine transferase [Leuconostoc citreum KM20]
gi|372556831|emb|CCF25071.1| Ribosomal RNA small subunit methyltransferase A [Leuconostoc
citreum LBAE C10]
gi|390447314|emb|CCF26425.1| Ribosomal RNA small subunit methyltransferase A [Leuconostoc
citreum LBAE C11]
gi|390482984|emb|CCF27688.1| Ribosomal RNA small subunit methyltransferase A [Leuconostoc
citreum LBAE E16]
Length = 295
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 138/265 (52%), Gaps = 20/265 (7%)
Query: 15 SGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKK 73
+ P + Q L G+ K GQ+ L + ++ IV AGI S D ++EIGPG G LT++
Sbjct: 8 ANPTRTQAILNQYGLHAKKKFGQNFLTDLNVLHGIVDVAGITSEDYVIEIGPGIGALTEQ 67
Query: 74 LLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC-------- 125
L + K V+A E+D MV L PY N +KVI+ D+LK +L +
Sbjct: 68 LARSAKKVVAFEIDPHMVAVLAETL--LPYDN-VKVIENDILKVNLAHVIATEFGEGAHV 124
Query: 126 --VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
VAN+PY I++P+ +LL + ++ ++M Q+E A RL A+ G K Y L++ Q +A
Sbjct: 125 KIVANLPYYITTPILMQLLRAKISWDNIVVMMQREVADRLNAEIGTKAYGVLTLTIQYYA 184
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIRKNKTLSSIF 242
+ +KV + F P P VDS+VV + P P V NP + ++ F + K+L +
Sbjct: 185 QAQLAIKVPASAFNPSPNVDSAVVMLTPIVPETVVDNPDKLFSVVKGSFAHRRKSLWN-- 242
Query: 243 RLKNVLSMLEKNYRTLQALQSSQNS 267
N+L M K Q +Q + +S
Sbjct: 243 ---NMLQMFGKQEDVKQRIQDALDS 264
>gi|194333711|ref|YP_002015571.1| dimethyladenosine transferase [Prosthecochloris aestuarii DSM 271]
gi|226732609|sp|B4S787.1|RSMA_PROA2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|194311529|gb|ACF45924.1| dimethyladenosine transferase [Prosthecochloris aestuarii DSM 271]
Length = 261
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 117/218 (53%), Gaps = 11/218 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I+ K GQ+ L + + IVQ A I+ D ++EIGPG G LT +LE AVE D
Sbjct: 11 IAVKKKLGQNFLTDRNTIRKIVQSAEIQPGDHVVEIGPGFGALTSAILEVCPSFTAVEKD 70
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD-----ICVANIPYQISSPLTFKLL 142
++ ++ + S + +++ D+L+ D + NIPY I+SP+ FKLL
Sbjct: 71 RKLADFIREEYPS------VNLVESDILEVDFAKLAEEGPVKVMGNIPYSITSPILFKLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
++ +M Q E A+RL A PG K Y L+V Q V +L KVGK FRP P+V
Sbjct: 125 ENRSHIISETLMMQHEVALRLAANPGTKEYGILAVQLQTFCDVRYLFKVGKKVFRPRPEV 184
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
DS+VVRI P+K E+ F+R+ F ++ KTL +
Sbjct: 185 DSAVVRIVPKKTPLDDCETEFRRFVRLAFQQRRKTLQN 222
>gi|423388189|ref|ZP_17365415.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-3]
gi|423416565|ref|ZP_17393654.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-1]
gi|401110219|gb|EJQ18130.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-1]
gi|401644379|gb|EJS62071.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-3]
Length = 292
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PYSN + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYSN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVKDETFFFEVVRASFAQRRKT 237
>gi|381166246|ref|ZP_09875463.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Phaeospirillum
molischianum DSM 120]
gi|380684693|emb|CCG40275.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Phaeospirillum
molischianum DSM 120]
Length = 279
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 121/234 (51%), Gaps = 13/234 (5%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVE 85
G+ KS GQH L + L I + AG S ++EIGPG G LT+ LL+AG + VIA+E
Sbjct: 15 GLDARKSLGQHFLFDLNLTGRIARAAGDLSVGTVIEIGPGPGGLTRALLDAGARQVIAIE 74
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD----ICVANIPYQISSPLTFKL 141
D R + +Q + Y RL++I D L+ D VAN+PY IS+ L
Sbjct: 75 RDDRAI-AIQDEIAAA-YPGRLQIIAADALEIDAATLGETPRRIVANLPYNISTVLLLAW 132
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L AF ++MFQKE RL A PG Y RLSV TQ V L V + F PPP
Sbjct: 133 LRRAEAFERMVLMFQKEVVDRLAAAPGSSQYGRLSVITQWLCEVRPLFNVDRRAFTPPPT 192
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL-SSIFRLKNVLSML 251
V S+V I PR P P + P ++ R+ F ++ K L SS+ L N +++
Sbjct: 193 VTSTVAEIIPR-PAP-LAPARFETMERVTAAAFGQRRKMLRSSLKALGNAEALI 244
>gi|193214866|ref|YP_001996065.1| dimethyladenosine transferase [Chloroherpeton thalassium ATCC
35110]
gi|193088343|gb|ACF13618.1| dimethyladenosine transferase [Chloroherpeton thalassium ATCC
35110]
Length = 256
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 118/219 (53%), Gaps = 11/219 (5%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
+S KS GQ+ L + + IV+ A I D ++EIGPG G+LTK + E VEL
Sbjct: 9 AVSSKKSFGQNFLVDSNISRKIVRSAEIAEHDNVIEIGPGFGSLTKIISEVMPRFTCVEL 68
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD-----ICVANIPYQISSPLTFKL 141
D ++ + R F + + +I D LK DL + NIPY I+SP+ FKL
Sbjct: 69 DHKLADFISREFPN------VNLISDDFLKVDLAKLAETKPLTVLGNIPYAITSPILFKL 122
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
+ ++ A++M Q E A RL A+P K Y L+V Q + +L KV K F+P P+
Sbjct: 123 IENRAHIDRAVLMMQDEVARRLTAEPKTKQYGILAVQLQAFGKPEYLFKVPKTVFKPRPE 182
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSS 240
V+S+VVRI+ KP NP E+ F+R F + KTL++
Sbjct: 183 VESAVVRIDFSKPVEIKNPSEFQTFVRTAFRMRRKTLAN 221
>gi|172056080|ref|YP_001812540.1| dimethyladenosine transferase [Exiguobacterium sibiricum 255-15]
gi|171988601|gb|ACB59523.1| dimethyladenosine transferase [Exiguobacterium sibiricum 255-15]
Length = 292
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 124/231 (53%), Gaps = 19/231 (8%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G SF KS GQ+ L + ++ +IV A + +LEIGPG G+LT++ + K V+
Sbjct: 14 LAKHGFSFKKSLGQNFLIDLNVLGNIVGAANLTPDSGVLEIGPGIGSLTEQSAKQAKKVV 73
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF-----------DICV-ANIP 130
A+E+D R++ L+ P+ +KVI GD L+ DL D+ V AN+P
Sbjct: 74 ALEIDQRLLPILEDSLAPYPH---VKVIHGDALELDLETIVDEEFTQQGITDLAVVANLP 130
Query: 131 YQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLK 190
Y +++P+ ++L + FR I+M QKE A R+ AQPG K Y LS+ Q +A
Sbjct: 131 YYVTTPIIMRILEARTPFRTLIMMIQKEVAERIGAQPGTKAYGSLSIAIQYYAEAEVCFT 190
Query: 191 VGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL---RICFIRKNKTL 238
V K F P P VDS+V+R+ RK P V ++ F R F ++ KT+
Sbjct: 191 VPKQVFIPAPNVDSAVIRLNIRK-EPAVKTLDEKLFFEVTRASFAQRRKTI 240
>gi|452077039|gb|AGF93010.1| ribosomal RNA adenine methylase transferase [uncultured organism]
Length = 220
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 61 LEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP 120
+EIGPG G LT ++E I +E D ++ LQ R+ ++++ DVL+ +LP
Sbjct: 1 MEIGPGLGILTDTIVEEADKTILIEKDQALIGYLQGRYGD----KNTEILKRDVLEKELP 56
Query: 121 YFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQ 180
FD V+N+P+ ISSP+TFKLL + F I+ +QK++A R+VA+ G+ Y RLSV
Sbjct: 57 DFDKVVSNLPFNISSPITFKLL--KKNFDLGILTYQKQYAERMVAKTGESEYSRLSVMVS 114
Query: 181 LHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP 214
A V L + KN+F PPPKVDSSVVR+ P +P
Sbjct: 115 TMADVKRLFDISKNSFYPPPKVDSSVVRLTPSEP 148
>gi|406992127|gb|EKE11532.1| hypothetical protein ACD_15C00064G0006 [uncultured bacterium]
Length = 269
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 136/255 (53%), Gaps = 40/255 (15%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQ+ LK+P ++E I+Q + I + +LEIGPG G LT+KL E GK +IAVELD ++ L
Sbjct: 6 GQNFLKDPAILEKIIQSSDITDINFVLEIGPGKGVLTEKLAELGKKIIAVELDDALIPYL 65
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYF----------DIC--------VANIPYQISSP 136
+ +F +P N +++I D+L+T+LP C +ANIPY I+SP
Sbjct: 66 KHKF--SPNKN-VEIIHEDILRTNLPALIEKYATRMQDSSCKSGIQYKVIANIPYYITSP 122
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ L + I+M QKE A R+VA G L+V+ +A L V KN F
Sbjct: 123 IIRLFLEQLIQPKEMILMIQKEVAQRIVAAKGQ--MSILAVSVGYYASAEILFDVDKNAF 180
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKT----LSSIFRLK---- 245
P PKVDSSV++I P+K + N E F RI F K KT LS+ ++K
Sbjct: 181 SPVPKVDSSVIKIVPQK---KFNKEEDKKFFRIVKAGFCSKRKTLLNNLSTSLKIKKETI 237
Query: 246 -NVLSM--LEKNYRT 257
+LS+ L+KN R
Sbjct: 238 EEILSLVSLDKNVRA 252
>gi|170289118|ref|YP_001739356.1| dimethyladenosine transferase [Thermotoga sp. RQ2]
gi|226732634|sp|B1LBH5.1|RSMA_THESQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|170176621|gb|ACB09673.1| dimethyladenosine transferase [Thermotoga sp. RQ2]
Length = 260
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 129/231 (55%), Gaps = 10/231 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G+ K GQ L + + + IV+ A + DV++EIG G G LT++L + G VI
Sbjct: 7 LKKYGVRLKKHLGQVFLSDDRIAKRIVKAADLTPEDVVVEIGAGAGTLTEELTKTGARVI 66
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDICVANIPYQISSPLTFKL 141
A E+D + LQ R P +++ D LK D+P ICV+NIPY I+ PL K+
Sbjct: 67 AYEIDESLAPILQERLSKYP---NVELRFEDFLKAKDVPEGAICVSNIPYNITGPLMEKI 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
+ + F+ AI+M QKE R++A+PG K Y LSV Q V L V ++ F P P+
Sbjct: 124 I--EWKFKRAIVMVQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVSRSCFVPNPE 181
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS+VV ++ RKP ++ ++ F+ + F +K KTL + LK LS+ E
Sbjct: 182 VDSTVVDLK-RKP-VDLDFEKFKKFVSMIFAKKRKTLKN--NLKPFLSIFE 228
>gi|417990878|ref|ZP_12631339.1| dimethyladenosine transferase [Lactobacillus casei A2-362]
gi|417994208|ref|ZP_12634542.1| dimethyladenosine transferase [Lactobacillus casei CRF28]
gi|418000225|ref|ZP_12640421.1| dimethyladenosine transferase [Lactobacillus casei T71499]
gi|410530524|gb|EKQ05297.1| dimethyladenosine transferase [Lactobacillus casei CRF28]
gi|410533320|gb|EKQ08001.1| dimethyladenosine transferase [Lactobacillus casei A2-362]
gi|410537145|gb|EKQ11724.1| dimethyladenosine transferase [Lactobacillus casei T71499]
Length = 298
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L + +++ IV A + D ++EIGPG G LT+ L ++ V+A+E+
Sbjct: 21 GFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKTDL +FD VAN+PY I++P
Sbjct: 81 DDRLLPILDETLADYPNAT---VVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL Q +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 138 ILLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAF 197
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R KP + +P +D +R F + KTL
Sbjct: 198 VPAPNVDSAIVTLTQRTKPLAALTDPASFDRLVRGAFASRRKTL 241
>gi|189346402|ref|YP_001942931.1| dimethyladenosine transferase [Chlorobium limicola DSM 245]
gi|226729767|sp|B3EIC2.1|RSMA_CHLL2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|189340549|gb|ACD89952.1| dimethyladenosine transferase [Chlorobium limicola DSM 245]
Length = 263
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 118/216 (54%), Gaps = 11/216 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I+ K GQ+ L + + IV+ +G K + ILEIGPG G LTK+++E VE D
Sbjct: 11 IAVKKQLGQNFLTDRNITRKIVRLSGAKPEENILEIGPGFGALTKEIIEVCPSFTVVEKD 70
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD-----ICVANIPYQISSPLTFKLL 142
++ F T Y +L VI+ D LK DL + NIPY I+SP+ F+LL
Sbjct: 71 PKLA-----AFIRTEYP-QLNVIEADFLKIDLEAVTGARKLRILGNIPYSITSPILFRLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
++ F A +M Q E AMR+VA P K Y L+V Q VS+ +VG+ F+P P V
Sbjct: 125 EYRRCFMHATLMMQHEVAMRIVAVPSTKEYGILAVQLQAFFDVSYGFRVGRKVFKPQPGV 184
Query: 203 DSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
DS+V+ I P++ P +P + F+R F ++ KTL
Sbjct: 185 DSAVITITPKEHVPLSDPEGFSRFVRCAFHQRRKTL 220
>gi|448640556|ref|ZP_21677459.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula sinaiiensis ATCC 33800]
gi|445761866|gb|EMA13105.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula sinaiiensis ATCC 33800]
Length = 285
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 6/213 (2%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
+ QH L + +++ I + A D+ +LEIG G G LT +LL + V AVE D
Sbjct: 26 QDQHFLVDDRVLDRIPEYATDADIDLSHVLEIGAGPGALTDRLLATAERVTAVERDPDFA 85
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+ F ++RL +++GD L+ DLP F ++N+PY SS + F+LL Q R
Sbjct: 86 AHLREEFTEEVAADRLTIVEGDALEIDLPDFTASISNLPYGASSEIAFRLLPEQ---RPL 142
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++MFQ+EFA R+ A P Y RLSV +A V + V F P P+V S++VR P
Sbjct: 143 LLMFQQEFAERMAANPATDNYGRLSVTAGHYADVKVVETVPPEAFDPQPRVTSALVRTMP 202
Query: 212 RKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
R P V + + FL+ F ++ KT+ + R
Sbjct: 203 RTPDYTVPSDDFFMDFLKAVFTQRRKTMRNAVR 235
>gi|87124270|ref|ZP_01080119.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. RS9917]
gi|86167842|gb|EAQ69100.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. RS9917]
Length = 280
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 128/231 (55%), Gaps = 19/231 (8%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVE 85
G + K GQH L++ ++E I+Q A +++ D +LE+GPG G LT++LL + V AVE
Sbjct: 5 GHTARKRFGQHWLRDDQVLERILQAADLQAGDRVLEVGPGRGALTERLLASPVASVHAVE 64
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC-----VANIPYQISSPLTFK 140
LD +V+ L++RF + P R + +GDVL L C VANIPY I+ PL +
Sbjct: 65 LDRDLVVGLRQRFAAEP---RFSLQEGDVLAVALEGPGGCRATKVVANIPYNITGPLLER 121
Query: 141 LLFH-----QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
L+ P ++ +++ QKE A R+ A+PG + LSV QL A S + V
Sbjct: 122 LVGRLDRPVDPPYQSLVLLVQKEVAERIRARPGQSSFSALSVRMQLLAYCSSVCPVPPRC 181
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEW----DGFLRICFIRKNKTLSSIF 242
F+PPPKV S VVR++P P Q PVE + LR+ F+ + K L +
Sbjct: 182 FQPPPKVQSEVVRLDP-LPADQRLPVELARDVERLLRMAFLARRKMLRNTL 231
>gi|257865533|ref|ZP_05645186.1| dimethyladenosine transferase [Enterococcus casseliflavus EC30]
gi|257871870|ref|ZP_05651523.1| dimethyladenosine transferase [Enterococcus casseliflavus EC10]
gi|257875149|ref|ZP_05654802.1| dimethyladenosine transferase [Enterococcus casseliflavus EC20]
gi|257799467|gb|EEV28519.1| dimethyladenosine transferase [Enterococcus casseliflavus EC30]
gi|257806034|gb|EEV34856.1| dimethyladenosine transferase [Enterococcus casseliflavus EC10]
gi|257809315|gb|EEV38135.1| dimethyladenosine transferase [Enterococcus casseliflavus EC20]
Length = 295
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 120/230 (52%), Gaps = 18/230 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L P ++ IV+ AGI T ++E+GPG G LT++L + K V+
Sbjct: 17 LAKHGFTFKKSLGQNFLTEPNILRKIVETAGIDETTNVIEVGPGIGALTEQLAKHAKQVL 76
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDIC-----VANIPY 131
A E+D R++ L Q PY N +K+I DVL+ DL + D VAN+PY
Sbjct: 77 AFEIDDRLIPVLADTMQ--PYQN-VKIIHQDVLQADLATTIQSAFSDTAASLKVVANLPY 133
Query: 132 QISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
I++P+ L Q ++M QKE A R+ A PG K Y LS+ Q + V
Sbjct: 134 YITTPIMMHFLESQVKVDEMVVMMQKEVADRISAVPGTKAYGSLSIAVQYYMEAKLAFIV 193
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL 238
K F P P VDS+++++ R+ +P V + F ++ F + KTL
Sbjct: 194 PKTVFVPQPNVDSAILKLT-RRSQPAVAVTDEKEFFKLTKAAFQLRRKTL 242
>gi|417647530|ref|ZP_12297366.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU144]
gi|329723947|gb|EGG60472.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU144]
Length = 296
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 20/256 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L + ++ I++ + I T ++E+GPG G+LT++L + K V+
Sbjct: 16 LDQYGFNFKKSLGQNFLIDVNIINKIIEASHIDCTTGVIEVGPGMGSLTEQLAKNAKKVM 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDIC-----VANIPYQ 132
A E+D R++ L+ +PY N + +I D+LKTD+ + C VAN+PY
Sbjct: 76 AFEIDQRLIPVLKDTL--SPYDN-VTIINEDILKTDIAKAVATHLQDCDKIMVVANLPYY 132
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ L+ ++M QKE RL AQ G K Y LS+ Q + S +L V
Sbjct: 133 ITTPILLNLMQQDVPIDGFVVMMQKEVGERLNAQVGTKAYGSLSIVAQYYTETSKVLTVP 192
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFRLKNVLS 249
K F PPP VDS VV++ R+ P V + +GF ++ F ++ KT+++ ++ N
Sbjct: 193 KTVFMPPPNVDSIVVKLMQRQ-EPLVQVDDEEGFFKLAKAAFAQRRKTINNNYQ--NFFK 249
Query: 250 MLEKNYRTL-QALQSS 264
+KN T+ Q L+S+
Sbjct: 250 DGKKNKETIRQWLESA 265
>gi|311740851|ref|ZP_07714678.1| dimethyladenosine transferase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304371|gb|EFQ80447.1| dimethyladenosine transferase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 300
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 5/184 (2%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L +P + IV A ++ TD +LE+GPG G+LT L+EA V AVE+DSR+
Sbjct: 42 KKLGQNFLHDPNTIRRIVAAAELEPTDRVLEVGPGMGSLTLGLVEAVGDVTAVEIDSRLA 101
Query: 92 LELQRRF--QSTPYSNRLKVIQGDVLK---TDLPYFDICVANIPYQISSPLTFKLLFHQP 146
+L ++ Y+ RL+V++ D L+ +D+ VAN+PY ++ P+ LL P
Sbjct: 102 AQLPDTVAERAPEYAQRLRVVEKDALRVTDSDVTEPTALVANLPYNVAVPVLLHLLETFP 161
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
+ R ++M Q E A RL AQPG K+Y SV + +VS +GKN F P P ++S +
Sbjct: 162 SIRRVLVMVQLEVADRLAAQPGSKVYGVPSVKAGFYGKVSKAGTIGKNVFWPAPNIESGL 221
Query: 207 VRIE 210
VRI+
Sbjct: 222 VRID 225
>gi|365826187|ref|ZP_09368133.1| hypothetical protein HMPREF0045_01769 [Actinomyces graevenitzii
C83]
gi|365257120|gb|EHM87184.1| hypothetical protein HMPREF0045_01769 [Actinomyces graevenitzii
C83]
Length = 689
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 114/216 (52%), Gaps = 11/216 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K+ GQ+ + +P V IV+ AG+++ + +LEIGPG G+LT LLEAG V AVE+D +
Sbjct: 28 KTLGQNFVNDPGTVRKIVRNAGVQAGEQVLEIGPGLGSLTLALLEAGAQVSAVEIDPPLA 87
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-------CVANIPYQISSPLTFKLLFH 144
L Q+ +L+V D L P I VAN+PY ++ P+ +L
Sbjct: 88 QALPTTAQARFPEAKLQVFTADALTITGPE-SIGGTTPVRLVANLPYNVAVPIVLTVLEK 146
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
P+ + ++M Q E A RL A PG+K+Y S +A L +G+N F P P VDS
Sbjct: 147 LPSIQTVLVMVQAEVADRLAATPGNKIYGVPSAKVAWYASARRTLTIGRNVFYPVPNVDS 206
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRI--CFIRKNKTL 238
++V+IE R+P P F I F ++ KTL
Sbjct: 207 ALVKIE-RRPHPDTAATREQVFAVIDAAFAQRRKTL 241
>gi|206972590|ref|ZP_03233533.1| dimethyladenosine transferase [Bacillus cereus AH1134]
gi|206732492|gb|EDZ49671.1| dimethyladenosine transferase [Bacillus cereus AH1134]
Length = 292
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-PYFD---------ICVANIPYQISSP 136
D R++ L PY N + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYGN-VTVINKDVLKADVHEVFNEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSTIIRLL-KRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|30018312|ref|NP_829943.1| dimethyladenosine transferase [Bacillus cereus ATCC 14579]
gi|75759603|ref|ZP_00739689.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218232555|ref|YP_002364891.1| dimethyladenosine transferase [Bacillus cereus B4264]
gi|218895177|ref|YP_002443588.1| dimethyladenosine transferase [Bacillus cereus G9842]
gi|296500873|ref|YP_003662573.1| dimethyladenosine transferase [Bacillus thuringiensis BMB171]
gi|365164140|ref|ZP_09360225.1| ribosomal RNA small subunit methyltransferase A [Bacillus sp.
7_6_55CFAA_CT2]
gi|384184124|ref|YP_005570020.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402562867|ref|YP_006605591.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
thuringiensis HD-771]
gi|410672413|ref|YP_006924784.1| ribosomal RNA small subunit methyltransferase A [Bacillus
thuringiensis Bt407]
gi|423364604|ref|ZP_17342073.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD022]
gi|423387006|ref|ZP_17364261.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-2]
gi|423410733|ref|ZP_17387853.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3O-2]
gi|423427594|ref|ZP_17404625.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-2]
gi|423433483|ref|ZP_17410487.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4O-1]
gi|423438922|ref|ZP_17415903.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X12-1]
gi|423506603|ref|ZP_17483192.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HD73]
gi|423526660|ref|ZP_17503105.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB1-1]
gi|423565601|ref|ZP_17541876.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A1]
gi|423589340|ref|ZP_17565426.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD045]
gi|423632839|ref|ZP_17608584.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD154]
gi|423644678|ref|ZP_17620295.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD166]
gi|423651362|ref|ZP_17626932.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD169]
gi|423658436|ref|ZP_17633735.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD200]
gi|434378684|ref|YP_006613328.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis HD-789]
gi|449086707|ref|YP_007419148.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452196417|ref|YP_007476498.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|33516920|sp|Q81JA5.1|RSMA_BACCR RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729753|sp|B7ISV1.1|RSMA_BACC2 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729754|sp|B7HIK9.1|RSMA_BACC4 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|29893852|gb|AAP07144.1| Dimethyladenosine transferase [Bacillus cereus ATCC 14579]
gi|74492894|gb|EAO56024.1| Dimethyladenosine transferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218160512|gb|ACK60504.1| dimethyladenosine transferase [Bacillus cereus B4264]
gi|218541640|gb|ACK94034.1| dimethyladenosine transferase [Bacillus cereus G9842]
gi|296321925|gb|ADH04853.1| dimethyladenosine transferase [Bacillus thuringiensis BMB171]
gi|326937833|gb|AEA13729.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|363613155|gb|EHL64677.1| ribosomal RNA small subunit methyltransferase A [Bacillus sp.
7_6_55CFAA_CT2]
gi|401072716|gb|EJP81178.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD022]
gi|401107989|gb|EJQ15925.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3X2-2]
gi|401109964|gb|EJQ17881.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG3O-2]
gi|401111546|gb|EJQ19435.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4O-1]
gi|401115410|gb|EJQ23262.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG4X12-1]
gi|401193678|gb|EJR00682.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A1]
gi|401223993|gb|EJR30553.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD045]
gi|401258883|gb|EJR65064.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD154]
gi|401269462|gb|EJR75492.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD166]
gi|401278414|gb|EJR84347.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD169]
gi|401287769|gb|EJR93540.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD200]
gi|401630260|gb|EJS48066.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
BAG1X1-2]
gi|401791519|gb|AFQ17558.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis HD-771]
gi|401877241|gb|AFQ29408.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis HD-789]
gi|402447428|gb|EJV79280.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HD73]
gi|402455153|gb|EJV86937.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
HuB1-1]
gi|409171542|gb|AFV15847.1| ribosomal RNA small subunit methyltransferase A [Bacillus
thuringiensis Bt407]
gi|449020464|gb|AGE75627.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452101810|gb|AGF98749.1| SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 292
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-PYFD---------ICVANIPYQISSP 136
D R++ L PY N + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYGN-VTVINKDVLKADVHEVFNEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|372269006|ref|ZP_09505054.1| dimethyladenosine transferase [Alteromonas sp. S89]
Length = 272
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 120/224 (53%), Gaps = 14/224 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
HK++ GQ+ L + ++E IV+ G K TD ++EIGPG G +T L++ + AVELD
Sbjct: 7 HKARKRFGQNFLVDENIIERIVRAIGPKDTDKLVEIGPGQGAITSLLIDKCPSLTAVELD 66
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKL 141
++ L+ +F+ P +I+ D LK D V N+PY IS+PL F L
Sbjct: 67 RDLIPMLEFKFRDYP---DFTIIEKDALKFDFGSMVEEGEQLRIVGNLPYNISTPLLFHL 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + + M QKE RL A PG K Y RLSV TQ + RV L V +FRP PK
Sbjct: 124 LSFRGKVKDMHFMLQKEVVDRLSAVPGVKAYGRLSVMTQYYCRVQGLFPVPPQSFRPAPK 183
Query: 202 VDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
VDS++VR+ P K P P N + + + F ++ KTL + +
Sbjct: 184 VDSAIVRLVPHKSLPHPAENEALLERIVSVAFQQRRKTLRNALK 227
>gi|377831023|ref|ZP_09814011.1| dimethyladenosine transferase [Lactobacillus mucosae LM1]
gi|377555120|gb|EHT16811.1| dimethyladenosine transferase [Lactobacillus mucosae LM1]
Length = 281
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 127/228 (55%), Gaps = 21/228 (9%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI K GQ+ L + ++++IV+ A I D ++EIGPG G LT++L +A V+A+E+
Sbjct: 5 GIHAKKGFGQNFLTDLNVLKNIVKAAAITKEDNVIEIGPGLGALTEQLAQAAGQVVALEI 64
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP------YFDI-----CVANIPYQISS 135
D+ ++ L +PY N +KV+ DVLK DLP + D VAN+PY I+S
Sbjct: 65 DTDLLPVLDEVL--SPYDN-VKVLNQDVLKADLPALIQEQFADPGRPIKVVANLPYYITS 121
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLY--CRLSVNTQLHARVSHLLKVGK 193
P+ LL A+ +M QKE A RL AQPG K Y L++ ++ AR++ V +
Sbjct: 122 PILMGLLESPVAWSAICVMMQKEVAQRLTAQPGTKEYGSLTLAIEYRMQARIA--FGVSR 179
Query: 194 NNFRPPPKVDSSVVRIEPRKPRPQVNPVE---WDGFLRICFIRKNKTL 238
+ F P P VDS++V + PR P + + GF++ CF + K+L
Sbjct: 180 HAFVPAPNVDSAIVVLTPRTQPLAAKPYDEGKFFGFVKNCFAHRRKSL 227
>gi|443668518|ref|ZP_21134201.1| dimethyladenosine transferase [Microcystis aeruginosa DIANCHI905]
gi|159030325|emb|CAO91220.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330807|gb|ELS45499.1| dimethyladenosine transferase [Microcystis aeruginosa DIANCHI905]
Length = 268
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 126/243 (51%), Gaps = 19/243 (7%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH LK+ +++ I+ A ++S D +LEIGPGTG LT++LL+ ++V+AVE+D
Sbjct: 3 IQPRKRFGQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEID 62
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLL-- 142
+ L ++F + +I GD L LP + VANIPY I+ P+ KLL
Sbjct: 63 RDLWTILNKKFGQ---QDNFHLIPGDFLTLKPEQLPPVNKVVANIPYNITGPILEKLLGS 119
Query: 143 ---FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
P ++ ++ QKE A RLVA P K Y LSV Q A + V + F PP
Sbjct: 120 IAHPFTPPYQSITLLLQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPP 179
Query: 200 PKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIF-------RLKNVLSML 251
P+VDS+V++I PR P+ N + F + K L + RL +L+ L
Sbjct: 180 PRVDSAVIQILPRVFPKNVGNAAFLSTLISWGFANRRKMLRNNLKNCLDSDRLSQILTQL 239
Query: 252 EKN 254
E N
Sbjct: 240 EIN 242
>gi|372324025|ref|ZP_09518614.1| Dimethyladenosine transferase [Oenococcus kitaharae DSM 17330]
gi|366982833|gb|EHN58232.1| Dimethyladenosine transferase [Oenococcus kitaharae DSM 17330]
Length = 292
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 129/243 (53%), Gaps = 19/243 (7%)
Query: 16 GPYQGQGLGAGGI--SFH----KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGN 69
GP G GI +H K GQ+ L + ++ I + A I D +LEIGPG G+
Sbjct: 4 GPEIGSPARTAGILNKYHLRASKRFGQNFLIDLNVLRQIAELAAINQDDTVLEIGPGIGS 63
Query: 70 LTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC---- 125
LT++L +A V+A E+D +++ L PY N +KVI D+LK D F
Sbjct: 64 LTEQLAKAAGQVVAYEIDKKLIPVLAETL--APYDN-VKVINQDILKADFSVFHDAKSLK 120
Query: 126 -VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHAR 184
VAN+PY I++P+ F LL + AF+ +M QKE A RL AQ G K Y LS+ Q
Sbjct: 121 IVANLPYYITTPILFYLLGEKLAFKSITVMMQKEVAARLQAQVGSKEYGELSLAIQYRTD 180
Query: 185 VSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGF--LRICFIRKNKTLSS-- 240
V+ L+V ++ F P P VDS+VV + P K + P E + F ++ F + K+L +
Sbjct: 181 VTIRLQVPRSAFMPSPNVDSAVVMLTP-KAGFKAFPYEKELFSLIKAAFAHRRKSLVNNL 239
Query: 241 IFR 243
+FR
Sbjct: 240 LFR 242
>gi|448651416|ref|ZP_21680485.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula californiae ATCC 33799]
gi|445770943|gb|EMA22001.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Haloarcula californiae ATCC 33799]
Length = 285
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 113/213 (53%), Gaps = 6/213 (2%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDV--ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
+ QH L + +++ I + A D+ +LEIG G G LT +LL V AVE D
Sbjct: 26 QDQHFLVDDRVLDRIPEYATDADIDLSHVLEIGAGPGALTDRLLATAGRVTAVERDPDFA 85
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCA 151
L+ F ++RL +++GD L+ DLP F ++N+PY SS + F+LL Q R
Sbjct: 86 AHLREEFTEEVAADRLTIVEGDALEVDLPDFTASISNLPYGASSEIAFRLLPEQ---RPL 142
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
++MFQ+EFA R+ A P Y RLSV +A V + V F P P+V S++VR P
Sbjct: 143 LLMFQQEFAERMAADPATDNYGRLSVTAGHYADVEVVETVPPEAFDPQPRVTSALVRTMP 202
Query: 212 RKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
R P V + + FL+ F ++ KT+ + R
Sbjct: 203 RTPDYTVPSDDFFMDFLKAVFTQRRKTMRNAVR 235
>gi|288958701|ref|YP_003449042.1| dimethyladenosine transferase [Azospirillum sp. B510]
gi|288911009|dbj|BAI72498.1| dimethyladenosine transferase [Azospirillum sp. B510]
Length = 291
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 14/237 (5%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKM-VIAVE 85
G+ K+ GQ+ L + L I + A + + +E+GPG G LT+ LL + VIA+E
Sbjct: 19 GLEARKALGQNFLLDLNLTGRIARSANLPAGTTAIEVGPGPGGLTRALLATNAVKVIAIE 78
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD----LPYFDICVANIPYQISSPLTFKL 141
D R + LQ ++ RL +++ D L D P VAN+PY +++PL
Sbjct: 79 RDRRFIEALQDVIEAA--QGRLSIVEADALTVDPEELAPAPRAIVANLPYNVATPLLLGW 136
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L A+ +MFQKE A RLVA+PG K Y RLSV TQ + L + F PPPK
Sbjct: 137 LARIDAYVSLTLMFQKEVADRLVAKPGSKAYGRLSVITQWRSDARVLFNLPPRAFTPPPK 196
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL-SSIFRLKNVLSMLEKN 254
V+S+VV + PR P +W ++ F ++ K L S+ L N ++LE+
Sbjct: 197 VESTVVHLTPRA---NPEPADWRALEQVTAAAFGQRRKMLRQSLKSLGNAEALLEET 250
>gi|299536734|ref|ZP_07050044.1| dimethyladenosine transferase [Lysinibacillus fusiformis ZC1]
gi|424740007|ref|ZP_18168419.1| dimethyladenosine transferase [Lysinibacillus fusiformis ZB2]
gi|298727848|gb|EFI68413.1| dimethyladenosine transferase [Lysinibacillus fusiformis ZC1]
gi|422946379|gb|EKU40790.1| dimethyladenosine transferase [Lysinibacillus fusiformis ZB2]
Length = 293
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 124/225 (55%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L +P ++ +IV A + +E+GPG G LT+ L + K V++ E+
Sbjct: 19 GFSFKKSLGQNFLIDPNILRNIVSHANLTENSGAIEVGPGIGALTEHLARSAKKVVSFEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD--------LPYFD--ICVANIPYQISSP 136
D R++ L+ +PY+N + +I D+LK D +P D + VAN+PY +++P
Sbjct: 79 DQRLLPVLEDTL--SPYNN-VSIIHSDILKADVEKVIADEMPGIDDIMVVANLPYYVTTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + R ++M QKE A R+ A+PG K Y LS+ Q + + + V K F
Sbjct: 136 ILLKLLNDRLPIRGFVVMMQKEVADRITAKPGTKEYGSLSIAIQYYVKADIAMTVPKTVF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL---RICFIRKNKTL 238
P P VDS+V+R+ + P V ++ D R F+++ KT+
Sbjct: 196 MPQPNVDSAVIRLI-KHEEPPVKVIDEDFLFVVTRASFVQRRKTI 239
>gi|30260231|ref|NP_842608.1| dimethyladenosine transferase [Bacillus anthracis str. Ames]
gi|42779120|ref|NP_976367.1| dimethyladenosine transferase [Bacillus cereus ATCC 10987]
gi|47525294|ref|YP_016643.1| dimethyladenosine transferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|47569890|ref|ZP_00240557.1| dimethyladenosine transferase [Bacillus cereus G9241]
gi|49183075|ref|YP_026327.1| dimethyladenosine transferase [Bacillus anthracis str. Sterne]
gi|49477600|ref|YP_034395.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145175|ref|YP_081654.1| dimethyladenosine transferase [Bacillus cereus E33L]
gi|65317501|ref|ZP_00390460.1| COG0030: Dimethyladenosine transferase (rRNA methylation) [Bacillus
anthracis str. A2012]
gi|165872549|ref|ZP_02217181.1| dimethyladenosine transferase [Bacillus anthracis str. A0488]
gi|167635072|ref|ZP_02393389.1| dimethyladenosine transferase [Bacillus anthracis str. A0442]
gi|167641541|ref|ZP_02399789.1| dimethyladenosine transferase [Bacillus anthracis str. A0193]
gi|170688890|ref|ZP_02880092.1| dimethyladenosine transferase [Bacillus anthracis str. A0465]
gi|170707547|ref|ZP_02898000.1| dimethyladenosine transferase [Bacillus anthracis str. A0389]
gi|177655321|ref|ZP_02936850.1| dimethyladenosine transferase [Bacillus anthracis str. A0174]
gi|190568974|ref|ZP_03021875.1| dimethyladenosine transferase [Bacillus anthracis str.
Tsiankovskii-I]
gi|196036349|ref|ZP_03103746.1| dimethyladenosine transferase [Bacillus cereus W]
gi|196041767|ref|ZP_03109057.1| dimethyladenosine transferase [Bacillus cereus NVH0597-99]
gi|206977937|ref|ZP_03238824.1| dimethyladenosine transferase [Bacillus cereus H3081.97]
gi|217957617|ref|YP_002336159.1| dimethyladenosine transferase [Bacillus cereus AH187]
gi|218901242|ref|YP_002449076.1| dimethyladenosine transferase [Bacillus cereus AH820]
gi|222093811|ref|YP_002527860.1| dimethyladenosine transferase [Bacillus cereus Q1]
gi|227812714|ref|YP_002812723.1| dimethyladenosine transferase [Bacillus anthracis str. CDC 684]
gi|229601390|ref|YP_002864692.1| dimethyladenosine transferase [Bacillus anthracis str. A0248]
gi|254682332|ref|ZP_05146193.1| dimethyladenosine transferase [Bacillus anthracis str. CNEVA-9066]
gi|254724182|ref|ZP_05185967.1| dimethyladenosine transferase [Bacillus anthracis str. A1055]
gi|254733577|ref|ZP_05191298.1| dimethyladenosine transferase [Bacillus anthracis str. Western
North America USA6153]
gi|254744655|ref|ZP_05202334.1| dimethyladenosine transferase [Bacillus anthracis str. Kruger B]
gi|254756360|ref|ZP_05208389.1| dimethyladenosine transferase [Bacillus anthracis str. Vollum]
gi|254762416|ref|ZP_05214258.1| dimethyladenosine transferase [Bacillus anthracis str. Australia
94]
gi|300119136|ref|ZP_07056837.1| dimethyladenosine transferase [Bacillus cereus SJ1]
gi|301051777|ref|YP_003789988.1| dimethyladenosine transferase [Bacillus cereus biovar anthracis
str. CI]
gi|375282138|ref|YP_005102571.1| dimethyladenosine transferase [Bacillus cereus NC7401]
gi|384177947|ref|YP_005563709.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|386733909|ref|YP_006207090.1| Dimethyladenosine transferase [Bacillus anthracis str. H9401]
gi|402554372|ref|YP_006595643.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
cereus FRI-35]
gi|421510658|ref|ZP_15957547.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. UR-1]
gi|421640732|ref|ZP_16081310.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. BF1]
gi|423357815|ref|ZP_17335407.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
IS075]
gi|423374905|ref|ZP_17352242.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
AND1407]
gi|423554025|ref|ZP_17530351.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
ISP3191]
gi|423571992|ref|ZP_17548208.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A12]
gi|423572816|ref|ZP_17548935.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-D12]
gi|423608134|ref|ZP_17584026.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD102]
gi|33516921|sp|Q81W00.1|RSMA_BACAN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900500|sp|Q63HJ1.1|RSMA_BACCZ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900530|sp|Q6HPX5.1|RSMA_BACHK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900550|sp|Q73FG7.1|RSMA_BACC1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729752|sp|B7JK47.1|RSMA_BACC0 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|226729755|sp|B7HPV2.1|RSMA_BACC7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807857|sp|C3P9I6.1|RSMA_BACAA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807858|sp|C3LJ13.1|RSMA_BACAC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807860|sp|B9IZC4.1|RSMA_BACCQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|30253552|gb|AAP24094.1| dimethyladenosine transferase [Bacillus anthracis str. Ames]
gi|42735035|gb|AAS38975.1| dimethyladenosine transferase [Bacillus cereus ATCC 10987]
gi|47500442|gb|AAT29118.1| dimethyladenosine transferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|47553424|gb|EAL11808.1| dimethyladenosine transferase [Bacillus cereus G9241]
gi|49177002|gb|AAT52378.1| dimethyladenosine transferase [Bacillus anthracis str. Sterne]
gi|49329156|gb|AAT59802.1| dimethyladenosine transferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51978644|gb|AAU20194.1| dimethyladenosine transferase [Bacillus cereus E33L]
gi|164711677|gb|EDR17222.1| dimethyladenosine transferase [Bacillus anthracis str. A0488]
gi|167510526|gb|EDR85924.1| dimethyladenosine transferase [Bacillus anthracis str. A0193]
gi|167529546|gb|EDR92296.1| dimethyladenosine transferase [Bacillus anthracis str. A0442]
gi|170127543|gb|EDS96417.1| dimethyladenosine transferase [Bacillus anthracis str. A0389]
gi|170667114|gb|EDT17875.1| dimethyladenosine transferase [Bacillus anthracis str. A0465]
gi|172080162|gb|EDT65255.1| dimethyladenosine transferase [Bacillus anthracis str. A0174]
gi|190559898|gb|EDV13882.1| dimethyladenosine transferase [Bacillus anthracis str.
Tsiankovskii-I]
gi|195990979|gb|EDX54950.1| dimethyladenosine transferase [Bacillus cereus W]
gi|196027387|gb|EDX66004.1| dimethyladenosine transferase [Bacillus cereus NVH0597-99]
gi|206743843|gb|EDZ55263.1| dimethyladenosine transferase [Bacillus cereus H3081.97]
gi|217065788|gb|ACJ80038.1| dimethyladenosine transferase [Bacillus cereus AH187]
gi|218538262|gb|ACK90660.1| dimethyladenosine transferase [Bacillus cereus AH820]
gi|221237858|gb|ACM10568.1| dimethyladenosine transferase [Bacillus cereus Q1]
gi|227006542|gb|ACP16285.1| dimethyladenosine transferase [Bacillus anthracis str. CDC 684]
gi|229265798|gb|ACQ47435.1| dimethyladenosine transferase [Bacillus anthracis str. A0248]
gi|298723458|gb|EFI64199.1| dimethyladenosine transferase [Bacillus cereus SJ1]
gi|300373946|gb|ADK02850.1| dimethyladenosine transferase [Bacillus cereus biovar anthracis
str. CI]
gi|324324031|gb|ADY19291.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus thuringiensis serovar finitimus YBT-020]
gi|358350659|dbj|BAL15831.1| dimethyladenosine transferase [Bacillus cereus NC7401]
gi|384383761|gb|AFH81422.1| Dimethyladenosine transferase [Bacillus anthracis str. H9401]
gi|401073996|gb|EJP82404.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
IS075]
gi|401093387|gb|EJQ01488.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
AND1407]
gi|401182106|gb|EJQ89248.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
ISP3191]
gi|401199126|gb|EJR06036.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-A12]
gi|401216740|gb|EJR23446.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
MSX-D12]
gi|401238631|gb|EJR45067.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD102]
gi|401795582|gb|AFQ09441.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus cereus FRI-35]
gi|401819279|gb|EJT18460.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. UR-1]
gi|403392111|gb|EJY89369.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus anthracis str. BF1]
Length = 292
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PY N + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYGN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVTDETFFFEVVRASFAQRRKT 237
>gi|336233583|ref|YP_004586199.1| ribosomal RNA small subunit methyltransferase A [Geobacillus
thermoglucosidasius C56-YS93]
gi|335360438|gb|AEH46118.1| Ribosomal RNA small subunit methyltransferase A [Geobacillus
thermoglucosidasius C56-YS93]
Length = 295
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 132/239 (55%), Gaps = 24/239 (10%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV AG+ +EIGPG G LT++L K V+A E+
Sbjct: 21 GFSFKKSLGQNFLIDTNILRKIVDVAGLSRETGAIEIGPGIGALTEQLARRAKKVVAFEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFD----ICVANIPYQISSP 136
D R++ L+ +PY N +++I DVLK D+ + D + VAN+PY +++P
Sbjct: 81 DQRLLPILEDTL--SPYEN-VRIIHQDVLKADIHRVIAEEFTDASDIMVVANLPYYVTTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL R ++M QKE A R+ AQPG K Y LS+ Q + ++ V + F
Sbjct: 138 IIMKLLTDNLPIRGIVVMLQKEVADRISAQPGTKDYGSLSIAIQYYTEAEKIMTVPRTVF 197
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF----LRICFIRKNKTLSSIFRLKNVLSML 251
P P VDS+V+R+ RK +P V+ V+ + F +R F ++ KT+ L N++S L
Sbjct: 198 IPQPNVDSAVIRLIKRK-QPPVD-VDDESFFFQVVRASFAQRRKTI-----LNNLISNL 249
>gi|342218672|ref|ZP_08711280.1| dimethyladenosine transferase [Megasphaera sp. UPII 135-E]
gi|341589368|gb|EGS32649.1| dimethyladenosine transferase [Megasphaera sp. UPII 135-E]
Length = 283
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 127/225 (56%), Gaps = 12/225 (5%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ +K GQ+ L +P +V I + A +K D +LEIGPG G+LT+ L E G V AVEL
Sbjct: 20 GLRMNKKLGQNFLISPDVVHQIARAADLKDGDSVLEIGPGIGSLTQALAETGAFVHAVEL 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFK 140
D ++ L + + + + +++I GD+LK + F +C AN+PY I++P+ +
Sbjct: 80 DVHLLPVLAK---TLAHYDNVEIIHGDILKISILDIVKKTPFTVC-ANLPYYITTPIIMQ 135
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL + + I M QKE A R+VA PG+K+Y LSV Q + L + ++F P P
Sbjct: 136 LLESRLPIKRMIFMVQKEVAQRMVAVPGNKIYGALSVAVQYYTEPQLLFDISPHSFLPAP 195
Query: 201 KVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTLSSIFR 243
+V SSVV ++ R KP +V + + ++ F ++ KTL + +
Sbjct: 196 EVTSSVVELQIRNKPIVEVSDEKRFFAVVKAAFAQRRKTLMNALK 240
>gi|291457904|ref|ZP_06597294.1| dimethyladenosine transferase [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291419448|gb|EFE93167.1| dimethyladenosine transferase [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 291
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 120/224 (53%), Gaps = 18/224 (8%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F K GQ+ L + ++ I+ + I D +LEIGPG G LT+ L E+ + VIAVELD +
Sbjct: 21 FQKRFGQNFLIDESVLRDILAASEITREDCVLEIGPGIGTLTQALCESARKVIAVELDKK 80
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD---------ICVANIPYQISSPLTFK 140
++ L+ + Y N L++IQGD L+ DL AN+PY I+SP+
Sbjct: 81 LIPILEENLSA--YDN-LRLIQGDALRLDLTKLIGEENDGHPIKVAANLPYYITSPILMS 137
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL + R IM Q+E A R+ A PG K Y LS+ Q +A++ + V + F P P
Sbjct: 138 LLESRAPIRSITIMVQREVADRMRALPGTKSYGALSLAVQYYAKIDLIRTVASSCFLPRP 197
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFL----RICFIRKNKTLSS 240
VDS+VV++ R P+ NP E FL R F + KTL++
Sbjct: 198 NVDSAVVKLTLRSETPE-NP-EEKAFLFRLIRSAFATRRKTLAN 239
>gi|339324689|ref|YP_004684382.1| ribosomal RNA small subunit methyltransferase A 3 [Cupriavidus
necator N-1]
gi|338164846|gb|AEI75901.1| ribosomal RNA small subunit methyltransferase A 3 [Cupriavidus
necator N-1]
Length = 280
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ IV ++ DV++EIGPG G LT LLE + VELD +V
Sbjct: 13 KRFGQNFLVDDTIIHGIVNAISPQADDVLVEIGPGLGALTTPLLERIPQMQVVELDRDLV 72
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
L+RR Y RL+V GD L D ++ V N+PY ISSPL F L+
Sbjct: 73 ERLRRR-----YGERLQVHAGDALDFDFGKLEVPGRPLRIVGNLPYNISSPLLFHLMDFA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+VA+PG K + RLS+ Q+ + H+L V +F PPPKVDS+
Sbjct: 128 DQVRDQHFMLQKEVVERMVAEPGSKAFGRLSIMLQVRYYMEHVLDVPPGSFNPPPKVDSA 187
Query: 206 VVRIEPRKPRPQVNPVEWDGFLR 228
VVR+ P P DG LR
Sbjct: 188 VVRMIPW-------PRHLDGRLR 203
>gi|312109189|ref|YP_003987505.1| dimethyladenosine transferase [Geobacillus sp. Y4.1MC1]
gi|423718306|ref|ZP_17692488.1| 16S ribosomal RNA methyltransferase, KsgA/Dim1 family [Geobacillus
thermoglucosidans TNO-09.020]
gi|311214290|gb|ADP72894.1| dimethyladenosine transferase [Geobacillus sp. Y4.1MC1]
gi|383365242|gb|EID42541.1| 16S ribosomal RNA methyltransferase, KsgA/Dim1 family [Geobacillus
thermoglucosidans TNO-09.020]
Length = 295
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 132/239 (55%), Gaps = 24/239 (10%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV AG+ +EIGPG G LT++L K V+A E+
Sbjct: 21 GFSFKKSLGQNFLIDTNILRKIVDVAGLSRETGAIEIGPGIGALTEQLARRAKKVVAFEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFD----ICVANIPYQISSP 136
D R++ L+ +PY N +++I DVLK D+ + D + VAN+PY +++P
Sbjct: 81 DQRLLPILEDTL--SPYEN-VRIIHQDVLKADIHRVIAEEFTDAADIMVVANLPYYVTTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL R ++M QKE A R+ AQPG K Y LS+ Q + ++ V + F
Sbjct: 138 IIMKLLTDNLPIRGIVVMLQKEVADRISAQPGTKDYGSLSIAIQYYTEAEKIMTVPRTVF 197
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF----LRICFIRKNKTLSSIFRLKNVLSML 251
P P VDS+V+R+ RK +P V+ V+ + F +R F ++ KT+ L N++S L
Sbjct: 198 IPQPNVDSAVIRLIKRK-QPPVD-VDDESFFFQVVRASFAQRRKTI-----LNNLISNL 249
>gi|148264355|ref|YP_001231061.1| dimethyladenosine transferase [Geobacter uraniireducens Rf4]
gi|146397855|gb|ABQ26488.1| dimethyladenosine transferase [Geobacter uraniireducens Rf4]
Length = 275
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 124/228 (54%), Gaps = 17/228 (7%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I KS GQ+ L + ++ IV I + D ILE+GPG G LT L+E V+AVELD
Sbjct: 4 IRAKKSMGQNFLVDRNVLTRIVDAVNISAEDRILEVGPGKGALTALLVERAAQVLAVELD 63
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--------CVANIPYQISSPLTF 139
++V L R F P N ++ +QGD+LK +L + AN+PY ISS + F
Sbjct: 64 RQLVPFLAREF--APQKN-VEFVQGDILKVNLSELLMDRWSGAWKVAANLPYNISSQVLF 120
Query: 140 KLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
K L + F I+M QKE RL+A PG K Y LSV +LH +S +L V +F P
Sbjct: 121 KFLDNPKLFSLLILMLQKEVGDRLIAAPGCKDYGILSVFCRLHFDISRVLIVKPGSFTPV 180
Query: 200 PKVDSSVVRIEPRKPRPQVNPVEWDGFLR----ICFIRKNKTLSSIFR 243
PKVDS V++ P P P+V+ VE + F R F ++ KTL + +
Sbjct: 181 PKVDSVVLKFVPL-PAPRVD-VEDESFFRKVVKAAFSQRRKTLWNCLK 226
>gi|350562120|ref|ZP_08930956.1| dimethyladenosine transferase [Thioalkalivibrio thiocyanoxidans ARh
4]
gi|349780059|gb|EGZ34398.1| dimethyladenosine transferase [Thioalkalivibrio thiocyanoxidans ARh
4]
Length = 276
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 114/221 (51%), Gaps = 14/221 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI+ K GQ+ L +P ++ IV K D +LEIGPG G LT+ LLE + + VEL
Sbjct: 4 GIAARKRFGQNFLHDPGVLARIVAAIAPKRDDPMLEIGPGLGALTQPLLERVEHLEVVEL 63
Query: 87 DSRMVLELQRRFQSTPYSNRLKV------IQGDVLKTDLPYFDICVANIPYQISSPLTFK 140
D ++ +L R + P +RL V + P V N+PY IS+PL F
Sbjct: 64 DRDLIPQL--RALAPP--DRLTVHAADALAFDFAARAPGPGRLRVVGNLPYNISTPLLFH 119
Query: 141 LLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPP 200
LL A R + QKE RLVA PG K Y RLSV AR L VG FRP P
Sbjct: 120 LLDQSAAIRDMHFLLQKEVVERLVATPGSKRYGRLSVMVGARARAQQLFTVGPGAFRPAP 179
Query: 201 KVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL 238
KV+S++VRIEP PRP V P D F +I F + KTL
Sbjct: 180 KVESALVRIEP-LPRPLVAPELADRFRKIVQQAFSNRRKTL 219
>gi|451943636|ref|YP_007464272.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Corynebacterium halotolerans YIM 70093 = DSM 44683]
gi|451903023|gb|AGF71910.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Corynebacterium halotolerans YIM 70093 = DSM 44683]
Length = 300
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 126/250 (50%), Gaps = 22/250 (8%)
Query: 8 KEKGKQKSGPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPG 66
+E Q GP + + L G++ K GQ+ + +P V IV A + D ++E+GPG
Sbjct: 11 EEPTAQLLGPVEIRQLAEKLGVTPTKKLGQNFVHDPNTVRRIVAAADLTDEDHVVEVGPG 70
Query: 67 TGNLTKKLLEAGKMVIAVELDSRMVLELQRR--FQSTPYSNRLKVIQGDVLKT---DLPY 121
G+LT LL+ V AVE+D R+ EL +++ +++RL V++ D LK DL
Sbjct: 71 LGSLTLALLDTAAKVTAVEIDPRLAAELPATVAWRAPDFADRLTVVERDALKVAPGDLGE 130
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQL 181
VAN+PY +S P+ LL P+ R ++M Q E A RL A PG K+Y SV
Sbjct: 131 PTALVANLPYNVSVPVLLHLLATFPSIRRVLVMVQAEVADRLAADPGSKVYGVPSVKAAF 190
Query: 182 HARVSHLLKVGKNNFRPPPKVDSSVVRI----EPRKPRP-------QVNPVEWDGFLRIC 230
+ V +GKN F P P ++S +VRI E P P QV PV +
Sbjct: 191 YGEVRRAGAIGKNVFWPAPNIESGLVRIDRFAEGEAPWPIDDATRRQVFPV-----VDAA 245
Query: 231 FIRKNKTLSS 240
F ++ KTL +
Sbjct: 246 FAQRRKTLRA 255
>gi|374292280|ref|YP_005039315.1| Dimethyladenosine transferase [Azospirillum lipoferum 4B]
gi|357424219|emb|CBS87086.1| Dimethyladenosine transferase [Azospirillum lipoferum 4B]
Length = 300
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 122/237 (51%), Gaps = 14/237 (5%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKM-VIAVE 85
G+ K+ GQ+ L + L I + A + + +E+GPG G LT+ LL + VIA+E
Sbjct: 32 GLEARKALGQNFLLDLNLTGRIARSANLPAGTTAIEVGPGPGGLTRALLATDAVKVIAIE 91
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD----LPYFDICVANIPYQISSPLTFKL 141
D R + LQ +++ RL +++ D L D P VAN+PY +++PL
Sbjct: 92 RDRRFIEALQDVIEAS--QGRLSIVEADALTVDPEELAPAPRAIVANLPYNVATPLLLGW 149
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L A+ +MFQKE A RLVA+PG K Y RLSV TQ + L + F PPPK
Sbjct: 150 LARIEAYVSLTLMFQKEVADRLVAKPGSKAYGRLSVITQWRSDARVLFNLPPRAFTPPPK 209
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL-SSIFRLKNVLSMLEKN 254
V+S+VV + PR P +W ++ F ++ K L S+ L N ++LE+
Sbjct: 210 VESTVVHLTPRA---NPEPADWRALEQVTAAAFGQRRKMLRQSLKSLGNAEALLEET 263
>gi|407707992|ref|YP_006831577.1| yitT family protein [Bacillus thuringiensis MC28]
gi|407385677|gb|AFU16178.1| dimethyladenosine transferase [Bacillus thuringiensis MC28]
Length = 292
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 123/223 (55%), Gaps = 15/223 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PYSN + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYSN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKT 237
P P VDS+++R+ R KP +V N + +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLLKRQKPVVEVTNETFFFEVVRASFAQRRKT 237
>gi|52078537|ref|YP_077328.1| dimethyladenosine transferase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319648566|ref|ZP_08002780.1| dimethyladenosine transferase [Bacillus sp. BT1B_CT2]
gi|404487407|ref|YP_006711513.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423680435|ref|ZP_17655274.1| dimethyladenosine transferase [Bacillus licheniformis WX-02]
gi|62900505|sp|Q65PH9.1|RSMA_BACLD RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|52001748|gb|AAU21690.1| dimethyladenosine transferase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52346401|gb|AAU39035.1| dimethyladenosine transferase RsmA [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317389333|gb|EFV70146.1| dimethyladenosine transferase [Bacillus sp. BT1B_CT2]
gi|383441541|gb|EID49250.1| dimethyladenosine transferase [Bacillus licheniformis WX-02]
Length = 292
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 122/229 (53%), Gaps = 17/229 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G SF KS GQ+ L + +++ IV AG+ ++EIGPG G LT++L + K V
Sbjct: 15 LNKYGFSFKKSLGQNFLIDTNILDRIVDHAGVTERTGVIEIGPGIGALTEQLAKRAKKVT 74
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFDIC-----VANIPYQ 132
A E+D R++ L+ +PY N + VI DVLK D+ F C VAN+PY
Sbjct: 75 AFEIDQRLLPILEDTL--SPYDN-VTVIHQDVLKADVRAVMDEQFQDCDEVMVVANLPYY 131
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
+++P+ KLL + ++M QKE A R+ A+P K Y LS+ Q + ++ V
Sbjct: 132 VTTPIIMKLLEENLPLKGIVVMLQKEVADRMAAKPSSKEYGSLSIAVQFYTEAKTVMNVP 191
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTL 238
K F P P VDS+V+R+ RK P V + F ++ F ++ KTL
Sbjct: 192 KTVFVPQPNVDSAVIRLTLRK-EPAVAVQDAAFFFQVVKASFAQRRKTL 239
>gi|402834660|ref|ZP_10883258.1| dimethyladenosine transferase [Selenomonas sp. CM52]
gi|402277366|gb|EJU26444.1| dimethyladenosine transferase [Selenomonas sp. CM52]
Length = 288
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 123/228 (53%), Gaps = 16/228 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L A G+ K GQ+ L + +V+ IV A I+ D +LEIGPG G LT+ LLEAG V
Sbjct: 16 LKAFGLRASKRLGQNFLVDGSVVKDIVAAAEIEDGDRVLEIGPGIGTLTQGLLEAGAHVT 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYFDICVANIPYQISS 135
AVELD ++ L + + L+++ GD+LKTD+ P+ AN+PY I++
Sbjct: 76 AVELDKKLPAVLAETLAA---YDHLRIVPGDILKTDIRALMENQPFK--VAANLPYYITT 130
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
P+ LL + M QKE A R++A PG K+Y LSV Q H + +V +
Sbjct: 131 PILLALLEQNLPITHIVTMVQKEVAERMIAAPGSKIYGALSVAVQYHTEPRIVREVAPRS 190
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSS 240
F P P+V S+V+ + R+ +P V + F R+ F ++ KTL++
Sbjct: 191 FIPAPEVASAVIACQKRE-KPPVEVTDERMFFRVARASFGQRRKTLAN 237
>gi|385811902|ref|YP_005848293.1| dimethyladenosine transferase [Lactobacillus fermentum CECT 5716]
gi|299782801|gb|ADJ40799.1| Dimethyladenosine transferase [Lactobacillus fermentum CECT 5716]
Length = 295
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 118/226 (52%), Gaps = 17/226 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI K GQ+ L NP ++ IV+ AGI D ++EIGPG G LT+KL +A V+A+E+
Sbjct: 19 GIHAKKGFGQNFLTNPDVLSGIVRAAGITKDDNVIEIGPGIGALTEKLAQAAGEVVALEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL----------PYFDI-CVANIPYQISS 135
D ++ L PY N + V+ DVLK +L P + VAN+PY I+S
Sbjct: 79 DESLLPVLDDVL--APYGN-VTVLNQDVLKANLADLVQTAFKDPTKPVKVVANLPYYITS 135
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
P+ F LL Q + +M QKE A RLVA+PG K Y L++ V V + +
Sbjct: 136 PILFALLASQVEWAAVCVMMQKEVADRLVAKPGTKDYGALTLAIDYRMDVKVAFNVSRKS 195
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEWD---GFLRICFIRKNKTL 238
F P P VDS++V + + V+P D +R CF + K+L
Sbjct: 196 FVPAPNVDSAIVVLTQKSAALPVSPFNEDRLFCLIRGCFAHRRKSL 241
>gi|428315438|ref|YP_007113320.1| dimethyladenosine transferase [Oscillatoria nigro-viridis PCC 7112]
gi|428239118|gb|AFZ04904.1| dimethyladenosine transferase [Oscillatoria nigro-viridis PCC 7112]
Length = 270
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 137/253 (54%), Gaps = 23/253 (9%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K QH LK+ ++ IV+ A + D +LEIGPGTG LT++LL A + V+AVE+D +
Sbjct: 7 RKQFAQHWLKSEKALDKIVKAASLDG-DRVLEIGPGTGILTRRLLPAAESVVAVEIDRDL 65
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYF---DICVANIPYQISSPLTFK 140
L+L ++ T + ++QGD L+ DL P F + VANIPY I+ P+ K
Sbjct: 66 CLKLAKQLGKT---DNFLLLQGDFLEMDLDAELTAFPKFQNPNKVVANIPYNITGPILQK 122
Query: 141 LL--FHQPA---FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
LL PA F +++ QKE A RL A+PG + LSV Q A + V +
Sbjct: 123 LLGTISVPAAKPFDAIVLLVQKEVAQRLYAKPGSTAFGALSVRVQYLAECELICDVPSKD 182
Query: 196 FRPPPKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN 254
F PPPKVDS+VVR+ PR+ VNP + +++ F K K L + LK + L+K
Sbjct: 183 FFPPPKVDSAVVRLLPRQIETAAVNPRYLENLVKLGFGSKRKMLRN--NLKGAVD-LDKL 239
Query: 255 YRTLQALQSSQNS 267
+ L+ LQ + S
Sbjct: 240 VQLLEELQINPQS 252
>gi|238852850|ref|ZP_04643255.1| dimethyladenosine transferase [Lactobacillus gasseri 202-4]
gi|282852550|ref|ZP_06261892.1| dimethyladenosine transferase [Lactobacillus gasseri 224-1]
gi|311111301|ref|ZP_07712698.1| dimethyladenosine transferase [Lactobacillus gasseri MV-22]
gi|238834544|gb|EEQ26776.1| dimethyladenosine transferase [Lactobacillus gasseri 202-4]
gi|282556292|gb|EFB61912.1| dimethyladenosine transferase [Lactobacillus gasseri 224-1]
gi|311066455|gb|EFQ46795.1| dimethyladenosine transferase [Lactobacillus gasseri MV-22]
Length = 296
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 127/224 (56%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + ++ IV+ A I+S D ++EIGPG G+LT++LL AG V+A E+D +
Sbjct: 26 KNLGQNFLVDLAAIKGIVEAADIQSGDQVIEIGPGIGSLTEQLLLAGAKVLAYEVDQDLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ ++R K++ DVLK + + D+ VAN+PY I++P+
Sbjct: 86 EILKNELPQKIDGEELNSRFKLVMKDVLKANFTKDSDGFLDLNKPVKIVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L+ F +M QKE A RLVA P K Y L++ Q V +V +F
Sbjct: 146 IFNLIKSDLDFSSLTLMMQKEVAERLVAIPKTKEYGPLTIAVQSRMNVELAEEVKSTSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P +P ++ +D +++CF ++ KTL++
Sbjct: 206 PRPKVDSAVVVLTPLTEKPNIDDYSFFDHVVKMCFAQRRKTLAN 249
>gi|191639502|ref|YP_001988668.1| dimethyladenosine transferase [Lactobacillus casei BL23]
gi|409998367|ref|YP_006752768.1| ribosomal RNA small subunit methyltransferase A [Lactobacillus
casei W56]
gi|190713804|emb|CAQ67810.1| Dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) (16S rRNA
dimethylase) (High level kasugamycin resistance protein
ksgA) (Kasugamycin dimethyltransferase) [Lactobacillus
casei BL23]
gi|406359379|emb|CCK23649.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
casei W56]
Length = 302
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L + +++ IV A + D ++EIGPG G LT+ L ++ V+A+E+
Sbjct: 25 GFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEI 84
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKTDL +FD VAN+PY I++P
Sbjct: 85 DDRLLPILDETLADYPNAT---VVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTP 141
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL Q +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 142 ILLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAF 201
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R +P + +P +D +R F + KTL
Sbjct: 202 VPAPNVDSAIVTLTQRTEPLAALTDPASFDRLVRGAFASRRKTL 245
>gi|395243320|ref|ZP_10420307.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
hominis CRBIP 24.179]
gi|394484550|emb|CCI81315.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
hominis CRBIP 24.179]
Length = 294
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 19/240 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + +++IVQ A I+ D ++EIGPG G+LT++LL AG V+A E+D +
Sbjct: 26 KNLGQNFLVDLNTIKAIVQAADIQKDDQVIEIGPGIGSLTEQLLLAGAKVLAYEVDQDLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL + R K++ DVLK + + D+ VAN+PY I++P+
Sbjct: 86 EILHNELPQTIGGQALDQRFKLVMKDVLKANFQEDAGNFLDLNNPVKIVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L+ F +M QKE A RL A+P K Y L++ Q V+ L+V +F
Sbjct: 146 IFDLIKSDLNFVSLTLMMQKEVAQRLSAKPKTKAYGPLTLAVQSRMHVNFDLEVMHTSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYR 256
P PKVDS+VV + P +P ++ + +D ++I F ++ KTLS+ LK +S +KN R
Sbjct: 206 PQPKVDSAVVTLTPLTQKPDIDDYQFFDHVVKIAFAQRRKTLSN--NLKTFIS--DKNER 261
>gi|260888713|ref|ZP_05899976.1| dimethyladenosine transferase [Selenomonas sputigena ATCC 35185]
gi|330839885|ref|YP_004414465.1| dimethyladenosine transferase [Selenomonas sputigena ATCC 35185]
gi|260861582|gb|EEX76082.1| dimethyladenosine transferase [Selenomonas sputigena ATCC 35185]
gi|329747649|gb|AEC01006.1| dimethyladenosine transferase [Selenomonas sputigena ATCC 35185]
Length = 288
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 122/228 (53%), Gaps = 16/228 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L A G+ K GQ+ L + +V+ IV A I+ D +LEIGPG G LT+ LLEAG V
Sbjct: 16 LKAFGLRASKRLGQNFLVDGSVVKDIVAAAEIEEGDRVLEIGPGIGTLTQGLLEAGAHVT 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYFDICVANIPYQISS 135
AVELD ++ L + + L+++ GD+LKTD+ P+ AN+PY I++
Sbjct: 76 AVELDKKLPAVLAETLAA---YDHLRIVPGDILKTDIRALMENQPFK--VAANLPYYITT 130
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
P+ LL + M QKE A R++A PG K+Y LSV Q H + +V +
Sbjct: 131 PILLALLEQHLPITHIVTMVQKEVAERMIAAPGSKIYGALSVAVQYHTEPRIVREVAPRS 190
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSS 240
F P P+V SSV+ + R +P V + F R+ F ++ KTL++
Sbjct: 191 FIPAPEVASSVIACKKRG-KPPVEVTDERMFFRVARASFGQRRKTLAN 237
>gi|389783832|ref|ZP_10195082.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter spathiphylli B39]
gi|388434264|gb|EIL91212.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter spathiphylli B39]
Length = 262
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 114/219 (52%), Gaps = 13/219 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KS GQH L + ++ IV ++ D ++EIGPG G LT LL A + + A+ELD+ ++
Sbjct: 7 KSFGQHFLHDGRYIDRIVSAIRPRAEDFVVEIGPGEGALTLPLLAAARRLTAIELDTDLI 66
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--------CVANIPYQISSPLTFKLLF 143
LQ R S + L ++ DVLK D N+PY ISSP+ F +
Sbjct: 67 PGLQARAAS---AGELHIVHADVLKVDFTAMAHSHGVSRLRIAGNLPYYISSPILFHCVE 123
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
H A + M QKE R+ A+PG K Y RLSV QL RV L +V FRPPPKVD
Sbjct: 124 HAAAIQDMHFMLQKEVVDRMAAEPGSKTYGRLSVMLQLACRVEPLFEVPPEAFRPPPKVD 183
Query: 204 SSVVRIEPRKPRP--QVNPVEWDGFLRICFIRKNKTLSS 240
S+VVR+ P P P ++ F ++ KTLS+
Sbjct: 184 SAVVRLLPLAPEELHDARPEHVYSVVKAAFGQRRKTLSN 222
>gi|227888939|ref|ZP_04006744.1| dimethyladenosine transferase [Lactobacillus johnsonii ATCC 33200]
gi|227850527|gb|EEJ60613.1| dimethyladenosine transferase [Lactobacillus johnsonii ATCC 33200]
Length = 294
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 127/224 (56%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + ++ IV+ A I+ D ++EIGPG G+LT++LL AG V+A E+D +
Sbjct: 26 KNLGQNFLVDLPAIKGIVEAADIQPGDQVIEIGPGIGSLTEQLLLAGAKVLAYEVDQDLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ +R K++ DVLK + + D+ VAN+PY I++P+
Sbjct: 86 EILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDNDGFLDLSKSVNIVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L+ F +M QKE A RLVA+P K Y LS+ Q V +V +F
Sbjct: 146 IFNLIKSDLDFSSLTLMMQKEVAERLVAKPKTKEYGPLSIAVQSRMNVRLAEEVKSTSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNP-VEWDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P +P +N V +D +++CF ++ KTL++
Sbjct: 206 PRPKVDSAVVVLTPLLEKPDINDYVFFDHVVKMCFAQRRKTLAN 249
>gi|255325442|ref|ZP_05366546.1| dimethyladenosine transferase [Corynebacterium tuberculostearicum
SK141]
gi|255297528|gb|EET76841.1| dimethyladenosine transferase [Corynebacterium tuberculostearicum
SK141]
Length = 300
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 5/184 (2%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L +P + IV A + TD +LE+GPG G+LT L+EA V AVE+DSR+
Sbjct: 42 KKLGQNFLHDPNTIRRIVAAAELDPTDRVLEVGPGLGSLTLGLVEAVGDVTAVEIDSRLA 101
Query: 92 LELQRRF--QSTPYSNRLKVIQGDVLK---TDLPYFDICVANIPYQISSPLTFKLLFHQP 146
+L ++ Y+ RL+V++ D L+ +D+ VAN+PY ++ P+ LL P
Sbjct: 102 AQLPDTVAERAPEYAQRLRVVEKDALRVTDSDVTEPTALVANLPYNVAVPVLLHLLETFP 161
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
+ R ++M Q E A RL AQPG K+Y SV + +VS +GKN F P P ++S +
Sbjct: 162 SIRRVLVMVQLEVADRLAAQPGSKVYGVPSVKAGFYGKVSKAGTIGKNVFWPAPNIESGL 221
Query: 207 VRIE 210
VRI+
Sbjct: 222 VRID 225
>gi|116628883|ref|YP_814055.1| dimethyladenosine transferase [Lactobacillus gasseri ATCC 33323]
gi|420147807|ref|ZP_14655082.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gasseri CECT 5714]
gi|116094465|gb|ABJ59617.1| dimethyladenosine transferase [Lactobacillus gasseri ATCC 33323]
gi|398400954|gb|EJN54485.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gasseri CECT 5714]
Length = 298
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 127/224 (56%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + ++ IV+ A I+S D ++EIGPG G+LT++LL AG V+A E+D +
Sbjct: 28 KNLGQNFLVDLAAIKGIVEAADIQSGDQVIEIGPGIGSLTEQLLLAGAKVLAYEVDQDLP 87
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ ++R K++ DVLK + + D+ VAN+PY I++P+
Sbjct: 88 EILKNELPQKIDGEELNSRFKLVMKDVLKANFTKDSDGFLDLNKPVKIVANLPYYITTPI 147
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L+ F +M QKE A RLVA P K Y L++ Q V +V +F
Sbjct: 148 IFNLIKSDLDFSSLTLMMQKEVAERLVAIPKTKEYGPLTIAVQSRMNVELAEEVKSTSFM 207
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P +P ++ +D +++CF ++ KTL++
Sbjct: 208 PRPKVDSAVVVLTPLTEKPNIDDYSFFDHVVKMCFAQRRKTLAN 251
>gi|407475932|ref|YP_006789809.1| ribosomal RNA small subunit methyltransferase A [Exiguobacterium
antarcticum B7]
gi|407060011|gb|AFS69201.1| Ribosomal RNA small subunit methyltransferase A [Exiguobacterium
antarcticum B7]
Length = 292
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 125/231 (54%), Gaps = 19/231 (8%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G SF KS GQ+ L + ++ +IV A + +LEIGPG G+LT++ + K V+
Sbjct: 14 LAKHGFSFKKSLGQNFLIDLNVLGNIVGAANLTPDSGVLEIGPGIGSLTEQSAKQAKKVV 73
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF-----------DICV-ANIP 130
A+E+D R++ L+ P+ +KVI GD L+ DL D+ V AN+P
Sbjct: 74 ALEIDQRLLPILEDSLAPYPH---VKVIHGDALELDLETIVDQEFTQQGITDLAVVANLP 130
Query: 131 YQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLK 190
Y +++P+ ++L + FR I+M QKE A R+ A+PG K Y LS+ Q +A
Sbjct: 131 YYVTTPIIMRILEARTPFRTLIMMIQKEVAERIGAKPGTKAYGSLSIAIQYYAEAEVCFT 190
Query: 191 VGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL---RICFIRKNKTL 238
V K+ F P P VDS+V+R+ RK P V ++ F R F ++ KT+
Sbjct: 191 VPKHVFIPAPNVDSAVIRLNIRK-EPAVKTLDEKLFFEVTRASFAQRRKTI 240
>gi|239630423|ref|ZP_04673454.1| dimethyladenosine transferase dimethyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301067575|ref|YP_003789598.1| dimethyladenosine transferase (rRNA methylation) [Lactobacillus
casei str. Zhang]
gi|385821272|ref|YP_005857659.1| Dimethyladenosine transferase [Lactobacillus casei LC2W]
gi|385824464|ref|YP_005860806.1| Dimethyladenosine transferase [Lactobacillus casei BD-II]
gi|417981761|ref|ZP_12622425.1| dimethyladenosine transferase [Lactobacillus casei 12A]
gi|417984584|ref|ZP_12625203.1| dimethyladenosine transferase [Lactobacillus casei 21/1]
gi|417997317|ref|ZP_12637576.1| dimethyladenosine transferase [Lactobacillus casei M36]
gi|418011963|ref|ZP_12651709.1| dimethyladenosine transferase [Lactobacillus casei Lc-10]
gi|418013041|ref|ZP_12652703.1| dimethyladenosine transferase [Lactobacillus casei Lpc-37]
gi|239526706|gb|EEQ65707.1| dimethyladenosine transferase dimethyltransferase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300439982|gb|ADK19748.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
casei str. Zhang]
gi|327383599|gb|AEA55075.1| Dimethyladenosine transferase [Lactobacillus casei LC2W]
gi|327386791|gb|AEA58265.1| Dimethyladenosine transferase [Lactobacillus casei BD-II]
gi|410521164|gb|EKP96129.1| dimethyladenosine transferase [Lactobacillus casei 12A]
gi|410524423|gb|EKP99332.1| dimethyladenosine transferase [Lactobacillus casei 21/1]
gi|410533077|gb|EKQ07765.1| dimethyladenosine transferase [Lactobacillus casei M36]
gi|410551212|gb|EKQ25280.1| dimethyladenosine transferase [Lactobacillus casei Lc-10]
gi|410556238|gb|EKQ30151.1| dimethyladenosine transferase [Lactobacillus casei Lpc-37]
Length = 298
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L + +++ IV A + D ++EIGPG G LT+ L ++ V+A+E+
Sbjct: 21 GFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKTDL +FD VAN+PY I++P
Sbjct: 81 DDRLLPILDETLADYPNAT---VVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL Q +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 138 ILLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAF 197
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R +P + +P +D +R F + KTL
Sbjct: 198 VPAPNVDSAIVTLTQRTEPLAALTDPASFDRLVRGAFASRRKTL 241
>gi|116618707|ref|YP_819078.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381337085|ref|YP_005174860.1| KsgA/Dim1 family 16S ribosomal RNA methyltransferase [Leuconostoc
mesenteroides subsp. mesenteroides J18]
gi|122271093|sp|Q03VR7.1|RSMA_LEUMM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|116097554|gb|ABJ62705.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|356645051|gb|AET30894.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 295
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 131/236 (55%), Gaps = 15/236 (6%)
Query: 15 SGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKK 73
+ P + Q L G+ K GQ+ L + ++ +IV+ A I + D ++EIGPG G LT++
Sbjct: 8 ANPTRTQAILNEYGLRAKKKFGQNFLTDLNVLHNIVEAAEITAEDYVIEIGPGIGALTEQ 67
Query: 74 LLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP------YFDIC-- 125
L + K V+A E+DS+MV L + PY N +KVI+ DVLK DL + D
Sbjct: 68 LARSAKKVLAFEIDSQMVEVLADTLK--PYDN-VKVIENDVLKVDLAKVISEEFGDNAHV 124
Query: 126 --VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
VAN+PY I++P+ +LL + ++M Q+E A RL A G K Y L++ Q A
Sbjct: 125 KIVANLPYYITTPILIQLLRSNINWDNIVVMMQREVADRLNAAVGTKSYGVLTLTIQYFA 184
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPV-EWDGFLRICFIRKNKTL 238
+ + +KV ++F P P VDS+VV++ P KP V V + G ++ F + K+L
Sbjct: 185 QATLAIKVPASSFNPSPNVDSAVVKLTPLKPTTVVENVGKLFGVIKGSFSHRRKSL 240
>gi|425456205|ref|ZP_18835916.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9807]
gi|389802755|emb|CCI18231.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9807]
Length = 268
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 126/243 (51%), Gaps = 19/243 (7%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH LK+ +++ I+ A ++S D +LEIGPGTG LT++LL+ ++V+AVE+D
Sbjct: 3 IQPRKRFGQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEID 62
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLL-- 142
+ L ++F + +I GD L LP + VANIPY I+ P+ KLL
Sbjct: 63 RDLWTILNKKFGQ---QDNFHLIPGDFLTLKPEQLPPVNKVVANIPYNITGPILEKLLGS 119
Query: 143 ---FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
P ++ ++ QKE A RLVA P K Y LSV Q A + V + F PP
Sbjct: 120 IAHPFTPPYQSITLLLQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPP 179
Query: 200 PKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIF-------RLKNVLSML 251
P+VDS+V+++ PR P+ N + F + K L + RL +L+ L
Sbjct: 180 PRVDSAVIQLLPRVFPKNVGNAAFLSTLISWGFANRRKMLRNNLKNCLDSDRLSQILTQL 239
Query: 252 EKN 254
E N
Sbjct: 240 EIN 242
>gi|196250755|ref|ZP_03149442.1| dimethyladenosine transferase [Geobacillus sp. G11MC16]
gi|196209705|gb|EDY04477.1| dimethyladenosine transferase [Geobacillus sp. G11MC16]
Length = 478
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 118/227 (51%), Gaps = 15/227 (6%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G SF KS GQ+ L + ++ IV AGI +EIGPG G LT++L K V+
Sbjct: 200 LARYGFSFKKSLGQNFLIDTNILRKIVDAAGISGDTGAIEIGPGIGALTEQLARRAKKVV 259
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF----------DICVANIPYQ 132
A E+DSR++ L + Y N +++I DVLK DL + VAN+PY
Sbjct: 260 AFEIDSRLLPILADTLSA--YDN-VRIIHQDVLKADLHAVIAEEFAEVSDRMVVANLPYY 316
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
+++P+ KLL + R ++M QKE A RL A+PG K Y L++ Q + ++ V
Sbjct: 317 VTTPIIMKLLTERLPIRGMVVMMQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVVMTVP 376
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGF--LRICFIRKNKT 237
+ F P P VDS+V+R+ R P E F +R F ++ KT
Sbjct: 377 RTVFMPQPNVDSAVIRLTKRSHPPVAVEDEEVFFQVVRASFAQRRKT 423
>gi|417987836|ref|ZP_12628389.1| dimethyladenosine transferase [Lactobacillus casei 32G]
gi|410522228|gb|EKP97177.1| dimethyladenosine transferase [Lactobacillus casei 32G]
Length = 298
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 116/224 (51%), Gaps = 15/224 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L + +++ IV A + D ++EIGPG G LT+ L ++ V+A+E+
Sbjct: 21 GFHIRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKTDL +FD VAN+PY I++P
Sbjct: 81 DDRLLPILDETLADYPNAT---VVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL Q +M QKE A RL A PG K Y LS+ QL A V V ++ F
Sbjct: 138 ILLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVVTAFTVSRHAF 197
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R KP + +P +D +R F + KTL
Sbjct: 198 VPAPNVDSAIVTLTQRTKPLAALTDPASFDRLVRGAFASRRKTL 241
>gi|408421817|ref|YP_006763231.1| ribosomal RNA small subunit methyltransferase A RsmA [Desulfobacula
toluolica Tol2]
gi|405109030|emb|CCK82527.1| RsmA: ribosomal RNA small subunit methyltransferase A
[Desulfobacula toluolica Tol2]
Length = 279
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 109/196 (55%), Gaps = 6/196 (3%)
Query: 18 YQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA 77
+ GQ L + K GQ+ L NP IV+K GI +LEIG G G LT +
Sbjct: 3 HPGQLLKQRKLYAGKELGQNFLSNPDTARIIVEKTGISKETRVLEIGSGLGALTIPIARI 62
Query: 78 GKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD-----ICVANIPYQ 132
V AVE DSR++ LQ+ + + N +++I DVLK D+ + + N+PY
Sbjct: 63 AYHVTAVEKDSRLIPLLQQELDTEGFKN-VEIINKDVLKLDIAEIAKDNKLVVIGNLPYN 121
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
ISS + F+L+ + A +MFQKE A R++A PG + Y RLS Q A+VS + K+G
Sbjct: 122 ISSQILFRLIEKRTCIEKAFLMFQKELANRIIAPPGGRDYSRLSAVVQYAAQVSRVAKIG 181
Query: 193 KNNFRPPPKVDSSVVR 208
++F P P+VDS+++R
Sbjct: 182 PSSFFPKPEVDSTILR 197
>gi|380509563|ref|ZP_09852970.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Xanthomonas sacchari NCPPB 4393]
Length = 264
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G KS GQH L + ++SIV+ K D ++EIGPG G +T LL + +E
Sbjct: 8 GAPAKKSLGQHFLSDRHYIDSIVRAVDPKPGDRLVEIGPGQGAITFPLLRRHGRLTVIEF 67
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD-----ICVANIPYQISSPLTFKL 141
D ++ L + L +I DVL D V N+PY ISSP+ F
Sbjct: 68 DRDLIAPLT---AAAADVGELTIINRDVLSVDFAALAEGTPIRLVGNLPYNISSPILFHA 124
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L H A M QKE R+ A PG K+Y RLSV Q + V+ L V FRPPPK
Sbjct: 125 LDHAAAIADMHFMLQKEVVDRMAADPGSKVYGRLSVMLQAYCEVTSLFVVPPGAFRPPPK 184
Query: 202 VDSSVVRIEPRKPRPQ--VNPVEWDGFLRICFIRKNKTL 238
VDS+VVR+ PR P+ +P + +R F ++ KTL
Sbjct: 185 VDSAVVRLVPRPPQTVGIADPKRFADVVRAAFGQRRKTL 223
>gi|339497389|ref|ZP_08658365.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Leuconostoc pseudomesenteroides KCTC 3652]
Length = 303
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 131/236 (55%), Gaps = 15/236 (6%)
Query: 15 SGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKK 73
+ P + Q L G+ K GQ+ L + ++ +IV+ A I + D ++EIGPG G LT++
Sbjct: 16 ANPTRTQAILNEYGLRAKKKFGQNFLTDLNVLHNIVEAAEITAEDYVIEIGPGIGALTEQ 75
Query: 74 LLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP------YFDIC-- 125
L + K V+A E+DS+MV L + PY N +KVI+ DVLK DL + D
Sbjct: 76 LARSAKKVLAFEIDSQMVEVLADTLK--PYDN-VKVIENDVLKVDLAKVISEEFGDNAHV 132
Query: 126 --VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
VAN+PY I++P+ +LL + ++M Q+E A RL A G K Y L++ Q A
Sbjct: 133 KIVANLPYYITTPILIQLLRSNINWDNIVVMMQREVADRLNAAVGTKSYGVLTLTIQYFA 192
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPV-EWDGFLRICFIRKNKTL 238
+ + +KV ++F P P VDS+VV++ P KP V V + G ++ F + K+L
Sbjct: 193 QATLAIKVPASSFNPSPNVDSAVVKLTPLKPTTVVENVGKLFGVIKGSFSHRRKSL 248
>gi|118475813|ref|YP_892964.1| dimethyladenosine transferase [Bacillus thuringiensis str. Al
Hakam]
gi|196047365|ref|ZP_03114578.1| dimethyladenosine transferase [Bacillus cereus 03BB108]
gi|225862093|ref|YP_002747471.1| dimethyladenosine transferase [Bacillus cereus 03BB102]
gi|376264068|ref|YP_005116780.1| Dimethyladenosine transferase [Bacillus cereus F837/76]
gi|166221644|sp|A0R8B4.1|RSMA_BACAH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|254807859|sp|C1ESX0.1|RSMA_BACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|118415038|gb|ABK83457.1| dimethyladenosine transferase [Bacillus thuringiensis str. Al
Hakam]
gi|196021767|gb|EDX60461.1| dimethyladenosine transferase [Bacillus cereus 03BB108]
gi|225788520|gb|ACO28737.1| dimethyladenosine transferase [Bacillus cereus 03BB102]
gi|364509868|gb|AEW53267.1| Dimethyladenosine transferase [Bacillus cereus F837/76]
Length = 292
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L PY N + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYGN-VTVINKDVLKADVHEVFSEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVTDEIFFFEVVRASFAQRRKT 237
>gi|383753330|ref|YP_005432233.1| putative ribosomal RNA small subunit methyltransferase A
[Selenomonas ruminantium subsp. lactilytica TAM6421]
gi|381365382|dbj|BAL82210.1| putative ribosomal RNA small subunit methyltransferase A
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 287
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 124/230 (53%), Gaps = 14/230 (6%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L A G+ K GQ+ L + +V+ IV A I+ D +LEIGPG G LT+ L EAG V
Sbjct: 20 LKAFGLRMSKKLGQNFLIDASIVQGIVDAAEIEEGDRVLEIGPGIGTLTQGLAEAGADVT 79
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSP 136
AVELD ++ L + Y N ++++ GD+LK ++P F + AN+PY I++P
Sbjct: 80 AVELDKKLPAVLAETLKG--YDN-VRIVPGDILKVNIPEIMGDKPFKVA-ANLPYYITTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL + M QKE A+R+VA+PG K Y LSV Q + +L V +F
Sbjct: 136 ILMALLERHLPITHMVTMVQKEVALRMVAKPGGKDYGALSVAVQYYTEPEIVLDVPPRSF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
P P+VDS V+ + R+ P V + F R+ F ++ KTLS+ +
Sbjct: 196 IPAPEVDSVVIACKVRE-TPAVQVQDEKMFFRVVKAAFGQRRKTLSNALK 244
>gi|312898803|ref|ZP_07758191.1| dimethyladenosine transferase [Megasphaera micronuciformis F0359]
gi|310619965|gb|EFQ03537.1| dimethyladenosine transferase [Megasphaera micronuciformis F0359]
Length = 285
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 119/220 (54%), Gaps = 14/220 (6%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
+ K GQ+ L P +V++I A I D +LEIGPG G LT+ L E V AVE+D
Sbjct: 22 LRMSKKWGQNFLIRPDVVKNIAIAADIGEGDEVLEIGPGIGTLTQALAETKASVTAVEID 81
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP------YFDICVANIPYQISSPLTFKL 141
R++ L + + Y N +++I GD+LK D+ F +C AN+PY I++P+ +L
Sbjct: 82 DRLLPILDKTLED--YEN-VRIIHGDILKIDINKEMNERSFTVC-ANLPYYITTPIIMRL 137
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + R ++M QKE A R+ A+PG ++Y LSV Q + + + +F PPP
Sbjct: 138 LEERLPIRKMVVMVQKEVAERMTAKPGSRIYGALSVAVQYYTKPRCEFDISPQSFLPPPA 197
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL 238
V S+VV +E R P V + F R+ F ++ KTL
Sbjct: 198 VTSTVVSMEVRT-EPAVAVKDEKLFFRVVKFAFAQRRKTL 236
>gi|401679504|ref|ZP_10811431.1| dimethyladenosine transferase [Veillonella sp. ACP1]
gi|400219438|gb|EJO50306.1| dimethyladenosine transferase [Veillonella sp. ACP1]
Length = 284
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 126/225 (56%), Gaps = 14/225 (6%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQ+ L +V+ IV+ A ++ + +LEIGPG G LT+ L ++G V A+ELD
Sbjct: 21 IKMSKKLGQNFLIKRGIVDEIVKAADLQEGEPVLEIGPGIGTLTQGLAQSGANVTAIELD 80
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSPLTFKL 141
+R++ L YSN + ++ GDVLK D+P F + VAN+PY I++P+ L
Sbjct: 81 TRLLEVLDTTLAQ--YSN-VTIVHGDVLKLDVPSIMHHEPFKV-VANLPYYITTPIIMSL 136
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + ++M QKE A+R+VA+PG K Y LSV Q + + +L V +F P P
Sbjct: 137 LESRLPIERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTKPDIVLDVPPKSFLPAPA 196
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFR 243
V SSV+R R +P V+ V+ F R+ F ++ KT ++ +
Sbjct: 197 VTSSVIRCVLRD-KPPVDVVDEKLFFRVVKAGFAQRRKTFANTMK 240
>gi|392972521|ref|ZP_10337910.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
equorum subsp. equorum Mu2]
gi|392509494|emb|CCI61217.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
equorum subsp. equorum Mu2]
Length = 296
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 129/234 (55%), Gaps = 17/234 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L + +++ I+ + I I+EIGPG G+LT++L + K V+
Sbjct: 16 LNQYGFNFKKSLGQNFLIDVNIIQKIIDASDIGENTGIIEIGPGMGSLTEQLAKNAKKVV 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF----------DICVANIPYQ 132
A E+D R++ L+ PY N +++I D+LK ++ ++ + VAN+PY
Sbjct: 76 AFEIDQRLIPVLKDTMG--PYDN-VEIINEDILKANIAHYVTEHLADCDNIMVVANLPYY 132
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ L+ ++M QKE RL AQ G K Y LS+ TQ + S +L V
Sbjct: 133 ITTPILLNLMQQTLPIDGYVVMMQKEVGERLNAQVGTKAYGSLSIVTQYYTETSKVLTVP 192
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
K F PPP VDS VV++ R+ P+V+ D F ++ F ++ KT+S+ ++
Sbjct: 193 KTVFLPPPNVDSIVVKLMKRQ-TPEVDIDNEDKFFKMTKAAFSQRRKTISNNYQ 245
>gi|395238697|ref|ZP_10416608.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gigeriorum CRBIP 24.85]
gi|394477374|emb|CCI86585.1| Ribosomal RNA small subunit methyltransferase A [Lactobacillus
gigeriorum CRBIP 24.85]
Length = 293
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 130/233 (55%), Gaps = 17/233 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + V I++ A I++ D ++EIGPG G+LT++LL AG V A E+D +
Sbjct: 26 KNLGQNFLVDHQAVMGIIEAAEIEAGDQVIEIGPGIGSLTEQLLLAGAKVFAYEVDDSLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL + ++R K++ D+L+ D +FD VAN+PY I++P+
Sbjct: 86 EILDNELPAKIAGEDLASRFKLLLKDILQADFKADIGDFFDFSQPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L F +M QKE A RL AQP K Y L++ Q V L V ++F
Sbjct: 146 IFSLANSDLNFVSLTLMMQKEVAERLEAQPNSKDYGPLTIAVQTQMAVKLALTVDHSSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFRLKNVLS 249
P PKVDSSVV + P + V V+ ++ +++CF ++ KTL++ LKN++S
Sbjct: 206 PAPKVDSSVVVLRPLAKKIAVGDVKHFNRVVKMCFAQRRKTLNN--NLKNLIS 256
>gi|56961852|ref|YP_173574.1| dimethyladenosine transferase [Bacillus clausii KSM-K16]
gi|62900485|sp|Q5WLW2.1|RSMA_BACSK RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|56908086|dbj|BAD62613.1| dimethyladenosine transferase [Bacillus clausii KSM-K16]
Length = 296
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G + KS GQ+ L + ++ IV+ +G D I+EIGPG G LT++L + V+A E+
Sbjct: 21 GFTLKKSLGQNFLIDLNILAKIVEASGFDEQDGIVEIGPGIGALTEQLAKKADKVVAFEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-YFDI---------CVANIPYQISSP 136
D R++ L+ + P +K+I DVLK DLP D VAN+PY +++P
Sbjct: 81 DGRLIPVLEDTLSAYP---NVKIIHSDVLKADLPGVLDAEFSKGQAIHVVANLPYYVTTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + F+ +M Q E A R+ A+PG K Y LS+ Q +A ++ V + F
Sbjct: 138 ILMKLLEDRLPFKSITVMIQAEVAERIAAKPGSKEYGALSIAAQYYAEAKPMVVVPASVF 197
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL 238
P P+VDSSV+++ R+ +P V ++ F + F + KT+
Sbjct: 198 VPQPRVDSSVLKLTIRE-KPLVEVIDERWFFNVFHASFANRRKTI 241
>gi|423583691|ref|ZP_17559802.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD014]
gi|423633628|ref|ZP_17609281.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD156]
gi|401208323|gb|EJR15090.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD014]
gi|401283338|gb|EJR89233.1| ribosomal RNA small subunit methyltransferase A [Bacillus cereus
VD156]
Length = 292
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 123/224 (54%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A I S +EIGPG G LT++L + K V+A E+
Sbjct: 18 GFSFKKSLGQNFLIDTNVLNRIVDHAEIGSESGAIEIGPGIGALTEQLAKRAKKVVAFEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-PYFD---------ICVANIPYQISSP 136
D R++ L PY N + VI DVLK D+ F+ + VAN+PY I++P
Sbjct: 78 DQRLLPILDETL--APYGN-VTVINKDVLKADVHEVFNEQFEEGQDVMVVANLPYYITTP 134
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ FKLL + R ++M QKE RL A+PG K Y LS+ Q + V ++ V + F
Sbjct: 135 ILFKLLEEKLPVRGFVVMMQKEVGDRLAAKPGTKEYGSLSIAIQYYTEVETVMTVPRTVF 194
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKT 237
P P VDS+++R+ ++P+P V + F +R F ++ KT
Sbjct: 195 VPQPNVDSAIIRLL-KRPKPVVEVKDETFFFEVVRASFAQRRKT 237
>gi|268318776|ref|YP_003292432.1| dimethyladenosine transferase [Lactobacillus johnsonii FI9785]
gi|262397151|emb|CAX66165.1| dimethyladenosine transferase [Lactobacillus johnsonii FI9785]
Length = 296
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 126/224 (56%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + ++ IV+ A I+ D ++EIGPG G+LT++LL AG V+A E+D +
Sbjct: 26 KNLGQNFLVDLPAIKGIVEAADIQRGDQVIEIGPGIGSLTEQLLLAGAKVLAYEVDQDLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ +R K++ DVLK + + D+ VAN+PY I++P+
Sbjct: 86 EILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDNDGFLDLSKSVKIVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L+ F +M QKE A RLVA+P K Y LS+ Q V +V +F
Sbjct: 146 IFNLIKSDLDFSSLTLMMQKEVAERLVAKPKTKEYGPLSIAVQSRMNVRLAEEVKSTSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P +P +N +D +++CF ++ KTL++
Sbjct: 206 PRPKVDSAVVVLTPLLEKPDINDYAFFDHVVKMCFAQRRKTLAN 249
>gi|18657023|gb|AAL78110.1|AC093568_20 Putative dimethyladenosine transferse [Oryza sativa]
gi|21321757|gb|AAM47292.1|AC122146_11 Putative dimethyladenosine transferse [Oryza sativa Japonica Group]
Length = 120
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 87/113 (76%), Gaps = 5/113 (4%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGA----GGISFHKSKGQHILKNPLLVESIVQKAGIKS 56
MAGGKI+K++ +G G G G GGI F KSKGQHIL+NP LV+SIV+KAG+K
Sbjct: 1 MAGGKIQKKRHGGGAGGGGGGGGGGARLQGGIPFEKSKGQHILRNPALVDSIVEKAGLKP 60
Query: 57 TDVILEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLELQRRFQSTPYSNRLK 108
TD +LEIGPGTGNLTK+LL+AG K V+AVELD RMVLEL RRFQ P ++RLK
Sbjct: 61 TDTVLEIGPGTGNLTKRLLQAGVKAVVAVELDPRMVLELNRRFQGDPLASRLK 113
>gi|227532998|ref|ZP_03963047.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|227189399|gb|EEI69466.1| dimethyladenosine transferase (S-adenosylmethionine-6-N ,
N-adenosyl(rRNA) dimethyltransferase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
Length = 302
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L + +++ IV A + D ++EIGPG G LT+ L ++ V+A+E+
Sbjct: 25 GFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEI 84
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKTDL +FD VAN+PY I++P
Sbjct: 85 DDRLLPILDETLADYPNA---MVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTP 141
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL Q +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 142 ILLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAF 201
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R +P + +P +D +R F + KTL
Sbjct: 202 VPAPNVDSAIVTLTQRTEPLAALTDPASFDRLVRGAFASRRKTL 245
>gi|227528872|ref|ZP_03958921.1| dimethyladenosine transferase [Lactobacillus vaginalis ATCC 49540]
gi|227351195|gb|EEJ41486.1| dimethyladenosine transferase [Lactobacillus vaginalis ATCC 49540]
Length = 297
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 126/232 (54%), Gaps = 21/232 (9%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G+ K GQ+ L +P +++ IV+ A + D ++EIGPG G LT+KL +A V+
Sbjct: 17 LNEYGLHAKKGFGQNFLTDPAILQRIVEAAEVTDADNVIEIGPGIGALTEKLAQAAGQVV 76
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP------YFDI-----CVANIPY 131
AVE+D ++ L++ + Y N + VI D+L+ +LP + D VAN+PY
Sbjct: 77 AVEIDQDLIPVLEKTLAA--YDN-VTVINQDILRANLPELIQQQFTDPTKPIKVVANLPY 133
Query: 132 QISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLY--CRLSVNTQLHARVSHLL 189
I+SP+ LL + +M QKE A RL A+PG K Y L++ Q+ A V+
Sbjct: 134 YITSPILMNLLASPVEWSSITVMMQKEVAQRLTAKPGTKQYGALTLAIEYQMDAEVA--F 191
Query: 190 KVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWD---GFLRICFIRKNKTL 238
V +++F P P VDS++V ++ R+ P + GF+R CF + K+L
Sbjct: 192 NVSRHSFIPAPNVDSAIVVLKQRQQPLTTKPFDKQKLMGFIRGCFAHRRKSL 243
>gi|227432115|ref|ZP_03914127.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352142|gb|EEJ42356.1| dimethyladenosine transferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 303
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 129/236 (54%), Gaps = 15/236 (6%)
Query: 15 SGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKK 73
+ P + Q L G+ K GQ+ L + ++ +IV+ A I + D ++EIGPG G LT++
Sbjct: 16 ANPTRTQAILNEYGLRAKKKFGQNFLTDLNVLHNIVEAAEITAEDYVIEIGPGIGALTEQ 75
Query: 74 LLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--------- 124
L + K V+A E+DS+MV L + PY N +KVI+ DVLK DL
Sbjct: 76 LARSAKKVLAFEIDSQMVEVLADTLK--PYDN-VKVIENDVLKVDLAKIISEEFGDNAHV 132
Query: 125 -CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
VAN+PY I++P+ +LL + ++M Q+E A RL A G K Y L++ Q A
Sbjct: 133 KIVANLPYYITTPILIQLLRSNINWDNIVVMMQREVADRLNAAVGTKSYGVLTLTIQYFA 192
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPV-EWDGFLRICFIRKNKTL 238
+ + +KV ++F P P VDS+VV++ P KP V V + G ++ F + K+L
Sbjct: 193 QATLAIKVPASSFNPSPNVDSAVVKLTPLKPTTIVENVGKLFGVIKGSFSHRRKSL 248
>gi|404330868|ref|ZP_10971316.1| dimethyladenosine transferase [Sporolactobacillus vineae DSM 21990
= SL153]
Length = 294
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)
Query: 29 SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDS 88
+ KS GQ+ L + ++++IVQ A + ++EIGPG G+LT+ L EA V+AVE+D
Sbjct: 21 TLKKSLGQNFLADENILKNIVQAANLTRDSYVVEIGPGAGSLTQYLAEAAGKVVAVEIDG 80
Query: 89 RMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD----------ICVANIPYQISSPLT 138
R+ L+ Q+ Y N + V GDVLK DLP VAN+PY +++P+
Sbjct: 81 RLKAILEETLQN--YDN-VVVRFGDVLKMDLPKMIAEEFPADAAVTVVANLPYYVTTPIL 137
Query: 139 FKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
KLL R ++M QKE A RL A PG K Y LS+ Q A S ++ V + F P
Sbjct: 138 LKLLTDHLPLRSIVVMVQKEVADRLEASPGQKSYGSLSIAVQYLADPSIVMTVPRTVFIP 197
Query: 199 PPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKTL 238
P VDS+V+R++ R P +V + F +R F + KTL
Sbjct: 198 QPNVDSAVIRLDIR-PEKRVAVTDEPFFFQIIRASFAHRRKTL 239
>gi|335436249|ref|ZP_08559049.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halorhabdus tiamatea SARL4B]
gi|334897931|gb|EGM36055.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halorhabdus tiamatea SARL4B]
Length = 292
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 1 MAGGKIRKEKGKQKSGPYQGQGLGA-GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDV 59
MAG G K+G L A G S + + QH L + +++ I A D+
Sbjct: 1 MAG---EDSAGDSKAGSRDPDALLARAGASGNPDQDQHFLVDDRVLDRIPTYATEAKMDL 57
Query: 60 --ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT 117
+LEIG G G LT +LL V A+E D + L+ F + RL +I+GD L+
Sbjct: 58 THVLEIGAGNGALTDRLLAVADRVTAIERDPDLAAFLRDEFADAIEAGRLTIIEGDALEV 117
Query: 118 DLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSV 177
DLP + ++N+PY SS + F+LL PA + + M Q EFA R+ A PG Y RLSV
Sbjct: 118 DLPDYTASISNLPYGASSEILFRLL---PAEKPLLAMVQAEFADRMAADPGTDEYGRLSV 174
Query: 178 NTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVE--WDGFLRICFIRKN 235
+A V + V F PPP V+S++VR R P V P E + GF++ F ++
Sbjct: 175 TAGHYADVEVVEPVPPEAFSPPPAVESALVRALARDPDYTV-PDEDFFLGFVKAVFTQRR 233
Query: 236 KTLSSIFRLKNVLSMLE 252
KT+ + R +S L+
Sbjct: 234 KTVRNGIRNTAHISGLD 250
>gi|262201474|ref|YP_003272682.1| dimethyladenosine transferase [Gordonia bronchialis DSM 43247]
gi|262084821|gb|ACY20789.1| dimethyladenosine transferase [Gordonia bronchialis DSM 43247]
Length = 305
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 123/240 (51%), Gaps = 17/240 (7%)
Query: 16 GPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
GP Q + L A G+ K+ GQ+ + + V IV ++G+ + DV+LE+GPG G+LT L
Sbjct: 30 GPAQIRQLAAEVGVRPTKTLGQNFVHDANTVRRIVAESGVGADDVVLEVGPGLGSLTLAL 89
Query: 75 LEAGKMVIAVELDSRMVLELQRRFQSTPYSNR--LKVIQGDVLKT---DLPYFDIC-VAN 128
LE V+AVE+D + L R + + +VI D L+ DLP VAN
Sbjct: 90 LEQAGRVVAVEIDPVLAQRLPRTIAERAAARQGDFEVITADALRVTRDDLPVAPTALVAN 149
Query: 129 IPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL 188
+PY ++ P+ LL P R A++M Q E A RL A+PG + Y SV + H V
Sbjct: 150 LPYNVAVPVLLHLLAVFPEIRTALVMVQAEVADRLAAEPGSRTYGVPSVKARYHGTVRRA 209
Query: 189 LKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWD------GFLRICFIRKNKTLSSIF 242
VG++ F P PKV+S +VRIE R PV+ + + F ++ KT+ S
Sbjct: 210 GAVGRSVFWPEPKVESGLVRIE----RTDTYPVDDELRGAVFAVVDAAFAQRRKTMRSAL 265
>gi|374339957|ref|YP_005096693.1| dimethyladenosine transferase [Marinitoga piezophila KA3]
gi|372101491|gb|AEX85395.1| dimethyladenosine transferase [Marinitoga piezophila KA3]
Length = 269
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 123/221 (55%), Gaps = 12/221 (5%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L I KS GQ+ L + IV+K + D ++EIGPG G LT+++ + G +
Sbjct: 7 LKKYNIQLKKSLGQNFLSTSEYAKKIVKKGSVTEEDTVIEIGPGAGTLTEEIAKTGAKLY 66
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFDICVANIPYQISSPL 137
A E+D R+ L RF+ Y N +++ D LK ++ P + +ANIPY I+SP+
Sbjct: 67 AFEIDERLKPLLLERFKE--YQN-VEIQFIDFLKANISEIQKPKY---IANIPYYITSPI 120
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
K+ F P F+ A++M QKE+ R++A+ G K Y LS+ Q +V +L V + F
Sbjct: 121 LEKIFFETPDFQLALLMVQKEYGERMMAKSG-KNYSPLSIFVQFFCKVEKVLNVPPHAFI 179
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
P PKVDS V+++ P++ P +N + F+ + F ++ KT+
Sbjct: 180 PNPKVDSVVLKLTPKEDIPDINKKGFFKFVHVAFSQRRKTI 220
>gi|303229693|ref|ZP_07316481.1| dimethyladenosine transferase [Veillonella atypica ACS-134-V-Col7a]
gi|302515818|gb|EFL57772.1| dimethyladenosine transferase [Veillonella atypica ACS-134-V-Col7a]
Length = 284
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 126/225 (56%), Gaps = 14/225 (6%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQ+ L +V+ IV+ A ++ + +LEIGPG G LT+ L ++G V A+ELD
Sbjct: 21 IKMSKKLGQNFLIKRGIVDEIVKAADLQEGEPVLEIGPGIGTLTQGLAQSGANVTAIELD 80
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSPLTFKL 141
+R++ L YSN + ++ GDVLK D+P F + VAN+PY I++P+ L
Sbjct: 81 TRLLEVLDTTLAQ--YSN-VTIVHGDVLKLDVPSIMNNEPFKV-VANLPYYITTPIIMSL 136
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + ++M QKE A+R+VA+PG K Y LSV Q + + +L V +F P P
Sbjct: 137 LESRLPIERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTKPDIVLDVPPKSFLPAPA 196
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFR 243
V SSV+R R +P V+ ++ F R+ F ++ KT ++ +
Sbjct: 197 VTSSVIRCVLRD-KPPVDVIDEKLFFRVVKAGFAQRRKTFANTMK 240
>gi|42518291|ref|NP_964221.1| dimethyladenosine transferase [Lactobacillus johnsonii NCC 533]
gi|385825157|ref|YP_005861499.1| dimethyladenosine transferase [Lactobacillus johnsonii DPC 6026]
gi|62900557|sp|Q74LI0.1|RSMA_LACJO RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|41582575|gb|AAS08187.1| dimethyladenosine transferase [Lactobacillus johnsonii NCC 533]
gi|329666601|gb|AEB92549.1| dimethyladenosine transferase [Lactobacillus johnsonii DPC 6026]
Length = 296
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 126/224 (56%), Gaps = 15/224 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + ++ IV+ A I+ D ++EIGPG G+LT++LL AG V+A E+D +
Sbjct: 26 KNLGQNFLVDLPAIKGIVEAADIQPGDQVIEIGPGIGSLTEQLLLAGAKVLAYEVDQDLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ +R K++ DVLK + + D+ VAN+PY I++P+
Sbjct: 86 EILNNELPQKIDGEELKDRFKLVMKDVLKANFVEDNDGFLDLSKSVKIVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L+ F +M QKE A RLVA+P K Y LS+ Q V +V +F
Sbjct: 146 IFNLIKSDLDFSSLTLMMQKEVAERLVAKPKTKEYGPLSIAVQSRMNVRLAEEVKSTSFM 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSS 240
P PKVDS+VV + P +P +N +D +++CF ++ KTL++
Sbjct: 206 PRPKVDSAVVVLTPLLEKPDINDYAFFDHVVKMCFAQRRKTLAN 249
>gi|27469208|ref|NP_765845.1| dimethyladenosine transferase [Staphylococcus epidermidis ATCC
12228]
gi|57866030|ref|YP_187727.1| dimethyladenosine transferase [Staphylococcus epidermidis RP62A]
gi|251809801|ref|ZP_04824274.1| dimethyladenosine transferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875423|ref|ZP_06284295.1| dimethyladenosine transferase [Staphylococcus epidermidis SK135]
gi|293366135|ref|ZP_06612822.1| dimethyladenosine transferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417657918|ref|ZP_12307570.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU028]
gi|417658417|ref|ZP_12308048.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU045]
gi|417909708|ref|ZP_12553442.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU037]
gi|417910395|ref|ZP_12554115.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU105]
gi|417912786|ref|ZP_12556469.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU109]
gi|418603822|ref|ZP_13167200.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU041]
gi|418606401|ref|ZP_13169679.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU057]
gi|418611281|ref|ZP_13174372.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU117]
gi|418616812|ref|ZP_13179735.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU120]
gi|418620905|ref|ZP_13183698.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU123]
gi|418624815|ref|ZP_13187478.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU125]
gi|418626900|ref|ZP_13189494.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU126]
gi|418628376|ref|ZP_13190923.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU127]
gi|418664875|ref|ZP_13226339.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU081]
gi|419770298|ref|ZP_14296380.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-250]
gi|420166924|ref|ZP_14673601.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM088]
gi|420170817|ref|ZP_14677374.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM070]
gi|420173848|ref|ZP_14680336.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM067]
gi|420182181|ref|ZP_14688321.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM049]
gi|420186718|ref|ZP_14692760.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM039]
gi|420196124|ref|ZP_14701903.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM021]
gi|420198397|ref|ZP_14704109.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM020]
gi|420203400|ref|ZP_14708978.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM018]
gi|420208050|ref|ZP_14713531.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM008]
gi|420210566|ref|ZP_14715990.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM003]
gi|420212976|ref|ZP_14718318.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM001]
gi|420215515|ref|ZP_14720781.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH05005]
gi|420218239|ref|ZP_14723336.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH05001]
gi|420221242|ref|ZP_14726193.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH04008]
gi|420223773|ref|ZP_14728662.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH08001]
gi|420226228|ref|ZP_14731049.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH06004]
gi|420228646|ref|ZP_14733393.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH05003]
gi|420231028|ref|ZP_14735704.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH04003]
gi|420233634|ref|ZP_14738241.1| dimethyladenosine transferase [Staphylococcus epidermidis
NIH051668]
gi|420236064|ref|ZP_14740594.1| dimethyladenosine transferase [Staphylococcus epidermidis
NIH051475]
gi|421608961|ref|ZP_16050170.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Staphylococcus epidermidis AU12-03]
gi|33516932|sp|Q8CQU5.1|RSMA_STAES RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|62900459|sp|Q5HRR2.1|RSMA_STAEQ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|27316757|gb|AAO05932.1|AE016751_227 dimethyladenosine transferase [Staphylococcus epidermidis ATCC
12228]
gi|57636688|gb|AAW53476.1| dimethyladenosine transferase [Staphylococcus epidermidis RP62A]
gi|251806669|gb|EES59326.1| dimethyladenosine transferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295780|gb|EFA88302.1| dimethyladenosine transferase [Staphylococcus epidermidis SK135]
gi|291319729|gb|EFE60088.1| dimethyladenosine transferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733035|gb|EGG69374.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU028]
gi|329737895|gb|EGG74123.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU045]
gi|341652642|gb|EGS76426.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU037]
gi|341656169|gb|EGS79891.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU105]
gi|341657151|gb|EGS80847.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU109]
gi|374406799|gb|EHQ77679.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU041]
gi|374408039|gb|EHQ78879.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU057]
gi|374409970|gb|EHQ80737.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU081]
gi|374820400|gb|EHR84488.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU120]
gi|374823719|gb|EHR87712.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU117]
gi|374826380|gb|EHR90278.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU125]
gi|374830949|gb|EHR94702.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU123]
gi|374831140|gb|EHR94887.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU126]
gi|374837841|gb|EHS01403.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU127]
gi|383357343|gb|EID34816.1| dimethyladenosine transferase [Staphylococcus aureus subsp. aureus
IS-250]
gi|394231837|gb|EJD77459.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM088]
gi|394239368|gb|EJD84812.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM067]
gi|394239582|gb|EJD85020.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM070]
gi|394250423|gb|EJD95611.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM049]
gi|394258888|gb|EJE03761.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM039]
gi|394262279|gb|EJE07055.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM021]
gi|394264476|gb|EJE09160.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM020]
gi|394268012|gb|EJE12587.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM018]
gi|394274793|gb|EJE19201.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM008]
gi|394276093|gb|EJE20446.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM003]
gi|394277478|gb|EJE21801.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM001]
gi|394282201|gb|EJE26410.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH05005]
gi|394284616|gb|EJE28721.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH05001]
gi|394284953|gb|EJE29046.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH04008]
gi|394286737|gb|EJE30722.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH08001]
gi|394292452|gb|EJE36195.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH06004]
gi|394294530|gb|EJE38207.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH05003]
gi|394295708|gb|EJE39347.1| dimethyladenosine transferase [Staphylococcus epidermidis NIH04003]
gi|394299764|gb|EJE43295.1| dimethyladenosine transferase [Staphylococcus epidermidis
NIH051668]
gi|394301419|gb|EJE44876.1| dimethyladenosine transferase [Staphylococcus epidermidis
NIH051475]
gi|406655358|gb|EKC81788.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Staphylococcus epidermidis AU12-03]
Length = 296
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 139/256 (54%), Gaps = 20/256 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L + ++ I++ + I T ++E+GPG G+LT++L + K V+
Sbjct: 16 LDQYGFNFKKSLGQNFLIDVNIINKIIEASHIDCTTGVIEVGPGMGSLTEQLAKNAKKVM 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDIC-----VANIPYQ 132
A E+D R++ L+ +PY N + +I D+LK D+ + C VAN+PY
Sbjct: 76 AFEIDQRLIPVLKDTL--SPYDN-VTIINEDILKADIAKAVDTHLQDCDKIMVVANLPYY 132
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ L+ ++M QKE RL AQ G K Y LS+ Q + S +L V
Sbjct: 133 ITTPILLNLMQQDVPIDGFVVMMQKEVGERLNAQVGTKAYGSLSIVAQYYTETSKVLTVP 192
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFRLKNVLS 249
K F PPP VDS VV++ R+ P V + +GF ++ F ++ KT+++ ++ N
Sbjct: 193 KTVFMPPPNVDSIVVKLMQRQ-EPLVQVDDEEGFFKLAKAAFAQRRKTINNNYQ--NFFK 249
Query: 250 MLEKNYRTL-QALQSS 264
+KN T+ Q L+S+
Sbjct: 250 DGKKNKETIRQWLESA 265
>gi|308066864|ref|YP_003868469.1| dimethyladenosine transferase [Paenibacillus polymyxa E681]
gi|305856143|gb|ADM67931.1| Dimethyladenosine transferase [Paenibacillus polymyxa E681]
Length = 294
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 124/227 (54%), Gaps = 17/227 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV AG+ T LEIGPG G LT+KL ++ K V AVE+
Sbjct: 21 GFSFKKSLGQNFLIDQNILNKIVNAAGLDETKGALEIGPGIGALTEKLAQSAKAVTAVEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDI----CVANIPYQISSP 136
D R++ L+ PY + +KV GDVLK DL + D+ VAN+PY +++P
Sbjct: 81 DQRLLPILEEVL--APYEH-VKVRHGDVLKLDLREVFAADFADVSKVSVVANLPYYVTTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ +LL + ++M QKE A R+ A PG K Y LS+ Q ++ + V F
Sbjct: 138 ILMRLLEDKLPLENIVVMIQKEVAERMAASPGTKDYGSLSIAVQYYSEPELVCIVPNTVF 197
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSS 240
P P V+S+V+R+ R+ P V V+ F + F ++ KT+S+
Sbjct: 198 IPQPNVESAVIRLRVREA-PPVEVVDEKHFFEVVHAAFAQRRKTISN 243
>gi|73663572|ref|YP_302353.1| dimethyladenosine transferase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119365849|sp|Q49V02.1|RSMA_STAS1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|72496087|dbj|BAE19408.1| dimethyladenosine transferase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 296
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 131/234 (55%), Gaps = 17/234 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L + ++ +I+ + I I+E+GPG G+LT++L ++ K V+
Sbjct: 16 LNQYGFNFKKSLGQNFLIDVNIIHNIIDASDIDEQTGIIEVGPGMGSLTEQLAKSAKKVM 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD----------ICVANIPYQ 132
A E+D R++ L+ + PY N + VI D+LK D+ ++ + VAN+PY
Sbjct: 76 AFEIDQRLIPVLKDTMR--PYDN-VTVINEDILKADIAHYITEHLTDCEKIMVVANLPYY 132
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ L+ + ++M QKE RL AQ G K Y LS+ Q + S +L V
Sbjct: 133 ITTPILLNLMQQKLPIDGYVVMMQKEVGERLNAQVGTKAYGSLSIVAQYYTETSKVLTVP 192
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
K+ F PPP VDS VV++ R P P V+ + + F ++ F ++ KT+++ ++
Sbjct: 193 KSVFLPPPNVDSIVVKLMKR-PTPIVDIDDENKFFKMTKAAFSQRRKTINNNYQ 245
>gi|290891124|ref|ZP_06554186.1| hypothetical protein AWRIB429_1576 [Oenococcus oeni AWRIB429]
gi|419758303|ref|ZP_14284620.1| dimethyladenosine transferase [Oenococcus oeni AWRIB304]
gi|419856510|ref|ZP_14379231.1| dimethyladenosine transferase [Oenococcus oeni AWRIB202]
gi|419859330|ref|ZP_14381985.1| dimethyladenosine transferase [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|421184694|ref|ZP_15642110.1| dimethyladenosine transferase [Oenococcus oeni AWRIB318]
gi|421188279|ref|ZP_15645618.1| dimethyladenosine transferase [Oenococcus oeni AWRIB419]
gi|421192703|ref|ZP_15649956.1| dimethyladenosine transferase [Oenococcus oeni AWRIB553]
gi|421195017|ref|ZP_15652229.1| dimethyladenosine transferase [Oenococcus oeni AWRIB568]
gi|421196887|ref|ZP_15654068.1| dimethyladenosine transferase [Oenococcus oeni AWRIB576]
gi|290479088|gb|EFD87750.1| hypothetical protein AWRIB429_1576 [Oenococcus oeni AWRIB429]
gi|399904925|gb|EJN92376.1| dimethyladenosine transferase [Oenococcus oeni AWRIB304]
gi|399965836|gb|EJO00402.1| dimethyladenosine transferase [Oenococcus oeni AWRIB419]
gi|399966296|gb|EJO00845.1| dimethyladenosine transferase [Oenococcus oeni AWRIB318]
gi|399974281|gb|EJO08444.1| dimethyladenosine transferase [Oenococcus oeni AWRIB553]
gi|399976206|gb|EJO10232.1| dimethyladenosine transferase [Oenococcus oeni AWRIB576]
gi|399976801|gb|EJO10814.1| dimethyladenosine transferase [Oenococcus oeni AWRIB568]
gi|410496879|gb|EKP88358.1| dimethyladenosine transferase [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|410499555|gb|EKP90986.1| dimethyladenosine transferase [Oenococcus oeni AWRIB202]
Length = 292
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 10/191 (5%)
Query: 30 FHKSK--GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
H SK GQ+ L + +++ IVQ A I D ++EIGPG G+LT++L +A K V+A E+D
Sbjct: 22 LHASKRLGQNFLIDLNVLQEIVQGAAIGPDDTVIEIGPGIGSLTEQLAKAAKQVVAYEID 81
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----CVANIPYQISSPLTFKLL 142
+++ L + PY N +K++ D+LK D F VAN+PY I++P+ F LL
Sbjct: 82 KKLIPILSETLR--PYKN-VKIVNRDILKADFSIFAKNQSLKIVANLPYYITTPILFYLL 138
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
F+ +M QKE A RL A G K Y LS+ Q V +L V + +F P P V
Sbjct: 139 NSSLNFKSVTVMMQKEVAARLQAGVGSKDYGELSLAIQYRVNVEIILPVTRKSFMPSPNV 198
Query: 203 DSSVVRIEPRK 213
DS+VV++ P++
Sbjct: 199 DSAVVQLTPKE 209
>gi|383786185|ref|YP_005470754.1| dimethyladenosine transferase [Fervidobacterium pennivorans DSM
9078]
gi|383109032|gb|AFG34635.1| dimethyladenosine transferase [Fervidobacterium pennivorans DSM
9078]
Length = 276
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 124/235 (52%), Gaps = 15/235 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI+ KS GQ+ L N + + IV+ + + D +LEIG G G LT L E G V A+E+
Sbjct: 13 GITLKKSLGQNFLSNEVFAKKIVELSEVNKNDTVLEIGAGAGTLTVALAETGATVYAIEI 72
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI---CVANIPYQISSPLTFKLLF 143
D R+ L+ R + P + +I D L DL + CV+NIPY I++P+ +L+F
Sbjct: 73 DERLKPILEERLLTFP---NVHLIFSDFLALDLSFLPSGYKCVSNIPYYITAPILKRLIF 129
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
F IM QKE RL+ +PG L+V Q A V +L + K+ F P P+VD
Sbjct: 130 T--PFSALFIMMQKEVGERLLEKPGSSNRGFLTVVLQTVANVEKILTIPKSAFVPNPEVD 187
Query: 204 SSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKT----LSSIFRLKNVLSML 251
S V++I ++P P + + + F R F +K KT L +I + NVL ++
Sbjct: 188 SVVLKITRKEPFPFADGSQLESFWRFVSNSFSQKRKTIYNNLKTITKDTNVLELI 242
>gi|418006241|ref|ZP_12646200.1| dimethyladenosine transferase [Lactobacillus casei UW1]
gi|410544165|gb|EKQ18501.1| dimethyladenosine transferase [Lactobacillus casei UW1]
Length = 298
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L + +++ IV A + D ++EIGPG G LT+ L ++ V+A+E+
Sbjct: 21 GFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKTDL +FD VAN+PY I++P
Sbjct: 81 DDRLLPILDETLADYPNA---MVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL Q +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 138 ILLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAF 197
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R +P + +P +D +R F + KTL
Sbjct: 198 VPAPNVDSAIVTLTQRTEPLAALTDPASFDRLVRGAFASRRKTL 241
>gi|114319429|ref|YP_741112.1| dimethyladenosine transferase [Alkalilimnicola ehrlichii MLHE-1]
gi|114225823|gb|ABI55622.1| dimethyladenosine transferase [Alkalilimnicola ehrlichii MLHE-1]
Length = 274
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L +P L+ +V+ + D ++EIGPG G LT LL A + AVELD +V
Sbjct: 11 KRFGQNFLHDPTLISRMVKAIRPRPGDPLVEIGPGEGALTLPLLRAAGRLTAVELDRDLV 70
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL-------PYFDICVANIPYQISSPLTFKLLFH 144
LQ R ++ + L V Q D L+ D P V N+PY IS+PL F LL
Sbjct: 71 APLQARART---AGELTVHQADALRFDFRQLAPAPPARLRVVGNLPYNISTPLLFHLLES 127
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
+ QKE RL A PG K Y RLSV Q V++L ++ FRPPPKVDS
Sbjct: 128 ADVIQDMHFTLQKEVVERLAAPPGSKTYGRLSVMVQYRCAVTNLFRLPPGAFRPPPKVDS 187
Query: 205 SVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
+ VR+ P P V+ + F R+ F ++ KTL + R
Sbjct: 188 AFVRLVPHA-EPTVDVGDEQAFARLVTQAFSQRRKTLRNTLR 228
>gi|432330527|ref|YP_007248670.1| dimethyladenosine transferase [Methanoregula formicicum SMSP]
gi|432137236|gb|AGB02163.1| dimethyladenosine transferase [Methanoregula formicicum SMSP]
Length = 255
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 4/209 (1%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QH L +P V I ++ V LEIGPG G LT+ LL+ V A+ELD+R+V +L
Sbjct: 7 QHFLIDPNAVNRIADLTEVQDKKV-LEIGPGNGALTRALLDREAFVHAIELDTRLVEQLT 65
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
F S +L + GD + P F+I V+N+PY SS +TF+LL + F ++M+
Sbjct: 66 DTFSREIASGQLVLQHGDATRCTFPPFEITVSNLPYSASSKITFRLL--EQNFEVGVLMY 123
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q EFA R+VA+ G K RLS+ Q +A V ++ F P P+V S+VV+I PR+P
Sbjct: 124 QAEFADRMVAKAGTKDCGRLSIMVQTYAAVQQCFRLPPQCFSPRPQVHSAVVKIFPREPI 183
Query: 216 PQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
+N + +R F + KT+ + +
Sbjct: 184 FFINDRRLYADVVRALFSHRRKTVRNCLK 212
>gi|425440265|ref|ZP_18820571.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9717]
gi|389719341|emb|CCH96809.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9717]
Length = 268
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 126/243 (51%), Gaps = 19/243 (7%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH LK+ +++ I+ A ++S D +LEIGPGTG LT++LL+ ++V+AVE+D
Sbjct: 3 IQPRKRFGQHWLKDESILDRIISAADLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEID 62
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLL-- 142
+ L ++F + +I GD L LP + VANIPY I+ P+ KLL
Sbjct: 63 RYLWTILNKKFGQ---QDNFHLIPGDFLTLKPEQLPPVNKVVANIPYNITGPILEKLLGS 119
Query: 143 ---FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
P ++ ++ QKE A RLVA P K Y LSV Q A + V + F PP
Sbjct: 120 IAHPFTPPYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCRWICDVPRRAFSPP 179
Query: 200 PKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIF-------RLKNVLSML 251
P+VDS+V+++ PR P+ N + F + K L + RL +L+ L
Sbjct: 180 PRVDSAVIQLLPRVFPKNVGNAAFLSTLISWGFANRRKMLRNNLKNCLDSDRLSQILTQL 239
Query: 252 EKN 254
E N
Sbjct: 240 EIN 242
>gi|303231892|ref|ZP_07318601.1| dimethyladenosine transferase [Veillonella atypica ACS-049-V-Sch6]
gi|429760016|ref|ZP_19292508.1| dimethyladenosine transferase [Veillonella atypica KON]
gi|302513421|gb|EFL55454.1| dimethyladenosine transferase [Veillonella atypica ACS-049-V-Sch6]
gi|429178728|gb|EKY20000.1| dimethyladenosine transferase [Veillonella atypica KON]
Length = 284
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 126/225 (56%), Gaps = 14/225 (6%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQ+ L +V+ IV+ A ++ + +LEIGPG G LT+ L ++G V A+ELD
Sbjct: 21 IKMSKKLGQNFLIKRGIVDEIVKAADLQEGEPVLEIGPGIGTLTQGLAQSGANVTAIELD 80
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSPLTFKL 141
+R++ L YSN + ++ GDVLK D+P F + VAN+PY I++P+ L
Sbjct: 81 TRLLEVLDTTLAQ--YSN-VTIVHGDVLKLDVPSIMHHEPFKV-VANLPYYITTPIIMSL 136
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + ++M QKE A+R+VA+PG K Y LSV Q + + +L V +F P P
Sbjct: 137 LESRLPIERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTKPDIVLDVPPKSFLPAPA 196
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFR 243
V SSV+R R +P V+ ++ F R+ F ++ KT ++ +
Sbjct: 197 VTSSVIRCVLRD-KPPVDVIDEKLFFRVVKAGFAQRRKTFANTMK 240
>gi|199597856|ref|ZP_03211282.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
rhamnosus HN001]
gi|258509566|ref|YP_003172317.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|385829188|ref|YP_005866960.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|199591292|gb|EDY99372.1| Dimethyladenosine transferase (rRNA methylation) [Lactobacillus
rhamnosus HN001]
gi|257149493|emb|CAR88466.1| Dimethyladenosine transferase [Lactobacillus rhamnosus GG]
gi|259650833|dbj|BAI42995.1| dimethyladenosine transferase [Lactobacillus rhamnosus GG]
Length = 294
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 116/224 (51%), Gaps = 15/224 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L +P +++ IV A + D ++EIGPG G LT+ L + V+A+E+
Sbjct: 19 GFHMRKGLGQNFLTDPQILQKIVAAADVSEQDDVIEIGPGIGALTQFLADQAHQVVALEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKT+L +FD VAN+PY I++P
Sbjct: 79 DDRLLPILAETLADYPNTT---VVNEDVLKTNLTELVATHFDGNHTLKVVANLPYYITTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 136 ILLHLLRAHLPLHSMTVMMQKEVAARLSAVPGSKDYGSLSIAVQLVADVATAFTVSRHAF 195
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R +P V +P +D +R F + KTL
Sbjct: 196 VPAPNVDSAIVTLTQRSEPLATVQSPESFDRLVRGAFASRRKTL 239
>gi|420164587|ref|ZP_14671314.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM095]
gi|420169399|ref|ZP_14675999.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM087]
gi|394231289|gb|EJD76922.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM087]
gi|394231328|gb|EJD76960.1| dimethyladenosine transferase [Staphylococcus epidermidis NIHLM095]
Length = 296
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 139/256 (54%), Gaps = 20/256 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L + ++ I++ + I T ++E+GPG G+LT++L + K V+
Sbjct: 16 LDQYGFNFKKSLGQNFLIDVNIINKIIEASHIDCTTGVIEVGPGMGSLTEQLAKNAKKVM 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDIC-----VANIPYQ 132
A E+D R++ L+ +PY N + +I D+LK D+ + C VAN+PY
Sbjct: 76 AFEIDQRLIPVLKDTL--SPYDN-VTIINEDILKADIAKAVATHLQDCDKIMVVANLPYY 132
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ L+ ++M QKE RL AQ G K Y LS+ Q + S +L V
Sbjct: 133 ITTPILLNLMQQDVPIDGFVVMMQKEVGERLNAQVGTKAYGSLSIVAQYYTETSKVLTVP 192
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFRLKNVLS 249
K F PPP VDS VV++ R+ P V + +GF ++ F ++ KT+++ ++ N
Sbjct: 193 KTVFMPPPNVDSIVVKLMQRQ-EPLVQVDDEEGFFKLAKAAFAQRRKTINNNYQ--NFFK 249
Query: 250 MLEKNYRTL-QALQSS 264
+KN T+ Q L+S+
Sbjct: 250 DGKKNKETIRQWLESA 265
>gi|407010616|gb|EKE25458.1| dimethyladenosine transferase [uncultured bacterium]
Length = 268
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 14/187 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KS GQ+ LK+ ++E IV+ I DV++EIGPG G LT+ L+E K VIA+ELD R++
Sbjct: 8 KSLGQNFLKDDQVLEKIVKNGNISPDDVVIEIGPGQGALTELLVEKCKKVIAIELDDRLI 67
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI---------CVANIPYQISSPLTFKLL 142
LQ +FQ Y +++I D+LK +LP + +ANIPY I++P+ LL
Sbjct: 68 PVLQEKFQ---YDENVEIIHDDILKINLPELIVKNELQSGYKVIANIPYYITAPIIRLLL 124
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
+ I+M QKE A R+ A+PG L+V+ Q ++ +L V + F P PKV
Sbjct: 125 ETKFPPSEIILMVQKEVAERITAKPGS--MSILAVSVQYYSEARYLFTVPRAAFDPVPKV 182
Query: 203 DSSVVRI 209
DS++++I
Sbjct: 183 DSAIIKI 189
>gi|390958127|ref|YP_006421884.1| dimethyladenosine transferase [Terriglobus roseus DSM 18391]
gi|390958466|ref|YP_006422223.1| dimethyladenosine transferase [Terriglobus roseus DSM 18391]
gi|390413045|gb|AFL88549.1| dimethyladenosine transferase [Terriglobus roseus DSM 18391]
gi|390413384|gb|AFL88888.1| dimethyladenosine transferase [Terriglobus roseus DSM 18391]
Length = 262
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 119/218 (54%), Gaps = 12/218 (5%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
GQ+ L + I G S +LEIGPG G +T L E K ++ +ELD + EL
Sbjct: 9 GQNFLVDDNARHRIADALGDVSQRTVLEIGPGHGAITTILAERAKRLVCIELDRSLAPEL 68
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYF------DICVANIPYQISSPLTFKLLFHQPAF 148
+ +F++ P +++++GDVL+TDL + + N+PY I+S + + H+ A
Sbjct: 69 RFKFRNHP---NVEIVEGDVLQTDLTALVPEGEKGLLIGNLPYYITSDILLHMFTHEAAL 125
Query: 149 RCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVR 208
A++M Q+E A R+ A+PG + + L Q+HAR + L + F PPP V S+V+R
Sbjct: 126 ELAVVMMQREVADRVAAEPGSRDFGLLGATAQMHARANSLFTLPPQAFAPPPDVYSTVLR 185
Query: 209 I--EPRKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFR 243
+ PR + + +D FL++CF +K KTLS+ R
Sbjct: 186 LAFAPRFDELGIADRKGFDRFLKLCFQQKRKTLSNNLR 223
>gi|242371677|ref|ZP_04817251.1| dimethyladenosine transferase [Staphylococcus epidermidis
M23864:W1]
gi|242350626|gb|EES42227.1| dimethyladenosine transferase [Staphylococcus epidermidis
M23864:W1]
Length = 296
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 128/234 (54%), Gaps = 17/234 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L + ++ I++ + I T I+E+GPG G+LT++L + K V+
Sbjct: 16 LDQYGFNFKKSLGQNFLVDVNIINKIIEASQIDETTGIIEVGPGMGSLTEQLAKHAKKVM 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFDIC-----VANIPYQ 132
+ E+D R++ L +PY N + +I D+LK D+ Y D C VAN+PY
Sbjct: 76 SFEIDQRLIPVLNDTL--SPYDN-VTIINEDILKADIGKAVNTYLDDCDKIMVVANLPYY 132
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ L+ ++M QKE RL A G K Y LS+ Q + S +L V
Sbjct: 133 ITTPILLNLMQQDIPIDGYVVMMQKEVGERLNASVGTKAYGSLSIVAQYYTETSKVLTVP 192
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
K+ F PPP VDS VV++ R+ P V+ + + F ++ F ++ KT+++ ++
Sbjct: 193 KSVFMPPPNVDSIVVKLMQRE-EPLVDIDDEEAFFKLAKAAFAQRRKTINNNYQ 245
>gi|269125239|ref|YP_003298609.1| dimethyladenosine transferase [Thermomonospora curvata DSM 43183]
gi|268310197|gb|ACY96571.1| dimethyladenosine transferase [Thermomonospora curvata DSM 43183]
Length = 316
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 134/252 (53%), Gaps = 9/252 (3%)
Query: 16 GPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
GP + + L A G+ K+ GQ+ + + V IV++A + TDV++E+GPG G+LT L
Sbjct: 9 GPAEVRELAARLGVRPTKTLGQNFVIDANTVRRIVREADLDETDVVVEVGPGLGSLTLAL 68
Query: 75 LEAGKMVIAVELDSRMVLELQR--RFQSTPYSNRLKVIQGDVLK-TDLP--YFDICVANI 129
LE + V+A+E+D + +L R ++ ++RL+V+ D L+ T+LP VAN+
Sbjct: 69 LERVQRVVAIEIDPVLAGQLPHTVRRRAPRLADRLEVVHADALRVTELPGPPPTALVANL 128
Query: 130 PYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLL 189
PY ++ P+ LL P R ++M Q E A RLVA+PG K+Y SV HA
Sbjct: 129 PYNVAVPVVLHLLAAFPTLRRGLVMVQAEVAERLVARPGGKVYGVPSVKLAWHAHARRAG 188
Query: 190 KVGKNNFRPPPKVDSSVVRIEPR-KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVL 248
VG+ F P P VDS++V R +P QV+ E + F ++ KTL + L
Sbjct: 189 PVGRAVFWPVPNVDSALVAFTRRAEPVAQVSREEVFAVIDAAFAQRRKTLRAA--LAGWA 246
Query: 249 SMLEKNYRTLQA 260
E R L+A
Sbjct: 247 GSAEAAERVLRA 258
>gi|138893714|ref|YP_001124167.1| dimethyladenosine transferase [Geobacillus thermodenitrificans
NG80-2]
gi|166221668|sp|A4IJB8.1|RSMA_GEOTN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|134265227|gb|ABO65422.1| Dimethyladenosine transferase [Geobacillus thermodenitrificans
NG80-2]
Length = 293
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 118/227 (51%), Gaps = 15/227 (6%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G SF KS GQ+ L + ++ IV AGI +EIGPG G LT++L K V+
Sbjct: 15 LARYGFSFKKSLGQNFLIDTNILRKIVDAAGISGDTGAIEIGPGIGALTEQLARRAKKVV 74
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF----------DICVANIPYQ 132
A E+DSR++ L + Y N +++I DVLK DL + VAN+PY
Sbjct: 75 AFEIDSRLLPILADTLSA--YDN-VRIIHQDVLKADLHAVIAEEFAEVSDRMVVANLPYY 131
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
+++P+ KLL + R ++M QKE A RL A+PG K Y L++ Q + ++ V
Sbjct: 132 VTTPIIMKLLTERLPIRGMVVMMQKEVADRLAAKPGTKDYGSLTIAVQYYTEAEVVMTVP 191
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGF--LRICFIRKNKT 237
+ F P P VDS+V+R+ R P E F +R F ++ KT
Sbjct: 192 RTVFMPQPNVDSAVIRLTKRSHPPVAVEDEEVFFQVVRASFAQRRKT 238
>gi|119474855|ref|ZP_01615208.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2143]
gi|119451058|gb|EAW32291.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2143]
Length = 267
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 112/226 (49%), Gaps = 13/226 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L++ ++ I + D I+EIGPG G LT +L G + A+ELD ++
Sbjct: 13 KRFGQNFLQDQGIIHRIARAVHATDKDHIVEIGPGQGALTTDILAGGCQLDAIELDRDLI 72
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
LQ++F P R + QGD L D V N+PY IS+PL F+LL
Sbjct: 73 PILQQQFSEQP---RFHLHQGDALTFDFSSLVKGEEKLRVVGNLPYNISTPLIFRLLDQH 129
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
+ M Q E RL A PG K Y RLS+ Q + + L +V F P PKV S+
Sbjct: 130 EMIQDMHFMLQLEVVNRLAASPGSKSYGRLSIMAQYYCDIHSLFEVPPEAFSPRPKVQSA 189
Query: 206 VVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
+VR+ P K P P N LR CF ++ KTL + LKN LS
Sbjct: 190 IVRLTPYKQPPHPAKNIKTLQALLRTCFNQRRKTLRN--SLKNDLS 233
>gi|338811316|ref|ZP_08623539.1| dimethyladenosine transferase [Acetonema longum DSM 6540]
gi|337276721|gb|EGO65135.1| dimethyladenosine transferase [Acetonema longum DSM 6540]
Length = 285
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 120/230 (52%), Gaps = 22/230 (9%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ K GQ+ L + +V SIV A + S D +LEIGPG G LT+ L E +++VEL
Sbjct: 20 GLGMSKKLGQNFLIDEQVVNSIVTAAHLSSADTVLEIGPGIGTLTQGLAETSAQIVSVEL 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI----------CVANIPYQISSP 136
D +++ L + + Y N ++V+ GD+LK FDI VAN+PY I++P
Sbjct: 80 DVKLIQVLAKTLEG--YQN-VRVVHGDILK-----FDISREITAERYKVVANLPYYITTP 131
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL + + M QKE A R+VA PG K Y LSV Q + + L V +F
Sbjct: 132 IIMHLLESRLPIELLVTMVQKEVAERMVAAPGGKDYGALSVAVQYYTQPEILFNVPPQSF 191
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
P P V+S+V+R R P V E F R+ F ++ KTLS+ +
Sbjct: 192 IPSPAVESAVIRCTVRN-VPPVALQEEKLFFRVVKGAFAQRRKTLSNALK 240
>gi|389722278|ref|ZP_10188934.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein,
partial [Rhodanobacter sp. 115]
gi|388442506|gb|EIL98695.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein,
partial [Rhodanobacter sp. 115]
Length = 256
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 45 VESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYS 104
+E IV ++ D ++EIGPG G LT LL A + A+ELD+ ++ LQ R +
Sbjct: 14 IERIVSSISPRADDFVVEIGPGEGALTLPLLAAAGKLTAIELDTDLIPGLQERAAAV--- 70
Query: 105 NRLKVIQGDVLKTD---------LPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
L +I DVLK D +P I N+PY ISSP+ F + H A + M
Sbjct: 71 GELAIIHADVLKVDFTALAHRHGVPRLRIA-GNLPYYISSPILFHCVEHAAAIQDMHFML 129
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP- 214
QKE R+ A+PG K+Y RLSV QL RV L V FRPPPKVDS+VVR+ P P
Sbjct: 130 QKEVVDRMAAEPGSKVYGRLSVMLQLACRVEPLFNVPPGAFRPPPKVDSAVVRLIPLTPV 189
Query: 215 -RPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
R +P +R F ++ KTL + R
Sbjct: 190 QRHDADPERLYAVVRAAFAQRRKTLGNALR 219
>gi|418413379|ref|ZP_12986620.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
epidermidis BVS058A4]
gi|410879141|gb|EKS26993.1| ribosomal RNA small subunit methyltransferase A [Staphylococcus
epidermidis BVS058A4]
Length = 296
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 139/256 (54%), Gaps = 20/256 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L + ++ I++ + I T ++E+GPG G+LT++L + K V+
Sbjct: 16 LDQYGFNFKKSLGQNFLIDVNIINKIIEASHIDCTTGVIEVGPGMGSLTEQLAKNAKKVM 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDIC-----VANIPYQ 132
A E+D R++ L+ +PY N + +I D+LK D+ + C VAN+PY
Sbjct: 76 AFEIDQRLIPVLKDTL--SPYDN-VTIINEDILKADIAKAVATHLQDCDKIMVVANLPYY 132
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ L+ ++M QKE RL AQ G K Y LS+ Q + S +L V
Sbjct: 133 ITTPILLNLMQQDIPIDGFVVMMQKEVGERLNAQVGTKAYGSLSIVAQYYTETSKVLTVP 192
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFRLKNVLS 249
K F PPP VDS VV++ R+ P V + +GF ++ F ++ KT+++ ++ N
Sbjct: 193 KTVFMPPPNVDSIVVKLMQRQ-EPLVQVDDEEGFFKLAKAAFAQRRKTINNNYQ--NFFK 249
Query: 250 MLEKNYRTL-QALQSS 264
+KN T+ Q L+S+
Sbjct: 250 DGKKNKETIRQWLESA 265
>gi|114569772|ref|YP_756452.1| dimethyladenosine transferase [Maricaulis maris MCS10]
gi|122316226|sp|Q0AQC3.1|RSMA_MARMM RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|114340234|gb|ABI65514.1| dimethyladenosine transferase [Maricaulis maris MCS10]
Length = 289
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 108/188 (57%), Gaps = 10/188 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLL-EAGKMVIAVELDSRM 90
KS GQH L + L I + AG S D +E+GPG G LT+ +L E ++AVE+DSR
Sbjct: 22 KSFGQHFLLDLNLTAKIARLAGDMSRDQAIEVGPGPGGLTRAILAEGAASLLAVEMDSRF 81
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDICVANIPYQISSPLTFKLLFH 144
+ L + RL V QGD L+ D P + ++N+PY + + L K L
Sbjct: 82 LGALDE--INVASGGRLTVEQGDALEVDETALLTGPGDKVILSNLPYNVGTQLLIKWLQA 139
Query: 145 QP-AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
+P +R A++MFQ+E A R+VAQPGDK Y RL+V +Q + LK+ F PPPKV+
Sbjct: 140 EPIWWRRAVLMFQREVADRVVAQPGDKAYGRLAVISQSRCQAHLALKIPARAFTPPPKVE 199
Query: 204 SSVVRIEP 211
S+VV ++P
Sbjct: 200 SAVVVLDP 207
>gi|116496022|ref|YP_807756.1| dimethyladenosine transferase [Lactobacillus casei ATCC 334]
gi|418003370|ref|ZP_12643457.1| dimethyladenosine transferase [Lactobacillus casei UCD174]
gi|116106172|gb|ABJ71314.1| dimethyladenosine transferase [Lactobacillus casei ATCC 334]
gi|410542487|gb|EKQ16934.1| dimethyladenosine transferase [Lactobacillus casei UCD174]
Length = 298
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L + +++ IV A + D ++EIGPG G LT+ L ++ V+A+E+
Sbjct: 21 GFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKTDL +FD VAN+PY I++P
Sbjct: 81 DDRLLPILDETLADYPNAT---VVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL Q +M Q+E A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 138 ILLHLLRAQLPLHSMTVMMQREVAERLSATPGSKEYGSLSIAVQLVASVATAFTVSRHAF 197
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R +P + +P +D +R F + KTL
Sbjct: 198 VPAPNVDSAIVTLTQRTEPLAALTDPASFDRLVRGAFASRRKTL 241
>gi|418009077|ref|ZP_12648918.1| dimethyladenosine transferase [Lactobacillus casei UW4]
gi|410544759|gb|EKQ19076.1| dimethyladenosine transferase [Lactobacillus casei UW4]
Length = 298
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G K GQ+ L + +++ IV A + D ++EIGPG G LT+ L ++ V+A+E+
Sbjct: 21 GFHMRKGLGQNFLTDSKILQKIVTAADLTPEDDVIEIGPGIGALTQFLADSAHQVVALEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L P + V+ DVLKTDL +FD VAN+PY I++P
Sbjct: 81 DDRLLPILDETLADYPNA---MVVNEDVLKTDLGALVAEHFDGKHTLKVVANLPYYITTP 137
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL Q +M QKE A RL A PG K Y LS+ QL A V+ V ++ F
Sbjct: 138 ILLHLLRAQLPLHSMTVMMQKEVAERLSATPGSKEYGSLSIAVQLVASVATAFMVSRHAF 197
Query: 197 RPPPKVDSSVVRIEPR-KPRPQV-NPVEWDGFLRICFIRKNKTL 238
P P VDS++V + R +P + +P +D +R F + KTL
Sbjct: 198 VPAPNVDSAIVTLTQRTEPLAALTDPASFDRLVRGAFASRRKTL 241
>gi|148270487|ref|YP_001244947.1| dimethyladenosine transferase [Thermotoga petrophila RKU-1]
gi|166221712|sp|A5IME8.1|RSMA_THEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|147736031|gb|ABQ47371.1| dimethyladenosine transferase [Thermotoga petrophila RKU-1]
Length = 260
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 128/231 (55%), Gaps = 10/231 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G+ K GQ L + + + IV++ G+ DV++EIG G G LT++L + G VI
Sbjct: 7 LKKYGVKLKKHLGQVFLSDDRIAKRIVKEVGLTPEDVVVEIGAGAGTLTEELAKTGARVI 66
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDICVANIPYQISSPLTFKL 141
A E+D + L+ R P +++ D LK D+P ICV+NIPY I+ P+ K+
Sbjct: 67 AYEIDESLAPVLRERLSKYP---NVELRFEDFLKAKDIPEGAICVSNIPYSITGPIMEKI 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
+ + F+ AI+M QKE R++A+PG K Y LSV Q V L V ++ F P P+
Sbjct: 124 I--EWKFKRAIVMVQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVSRSCFVPNPE 181
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS+VV + R+ ++ ++ F+ + F +K KTL + L+ LS+ E
Sbjct: 182 VDSTVVDL--RRKSVDLDFEKFRKFVSMIFAKKRKTLKN--NLRPFLSVFE 228
>gi|428776521|ref|YP_007168308.1| dimethyladenosine transferase [Halothece sp. PCC 7418]
gi|428690800|gb|AFZ44094.1| dimethyladenosine transferase [Halothece sp. PCC 7418]
Length = 276
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 127/229 (55%), Gaps = 15/229 (6%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
K QH LK+ ++ I+ A + DV+LEIGPGTG LTK+LL+ K V A+ELD +
Sbjct: 4 QKRFAQHWLKSEKALQEIITAAQLSPEDVVLEIGPGTGILTKELLKTVKKVSAIELDQAL 63
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF-----DICVANIPYQISSPLTFKLL--F 143
+ LQ +F+ + L +IQGD LK +L + VANIPY I+ P+ KLL
Sbjct: 64 MKHLQEKFRQ---KDNLILIQGDFLKLELESILREKPNKVVANIPYNITGPILEKLLGSI 120
Query: 144 HQP--AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
+P + I++ QKE A R+ A+ G K + LSV TQ A + V F PPPK
Sbjct: 121 AEPNRKYDRIILLVQKEIAERICAESGSKTFGALSVRTQYLAECELISLVPAKAFSPPPK 180
Query: 202 VDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
VDS+++ + PR P+ +P + +++ F + K L + LK+V+S
Sbjct: 181 VDSAIISLTPRVFPQSATSPKLLEKLVKLGFANRRKMLRN--NLKSVIS 227
>gi|440755385|ref|ZP_20934587.1| dimethyladenosine transferase [Microcystis aeruginosa TAIHU98]
gi|440175591|gb|ELP54960.1| dimethyladenosine transferase [Microcystis aeruginosa TAIHU98]
Length = 268
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 11/193 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH LK+ +++ I+ A ++S D +LEIGPGTG LT++LL+ ++V+AVE+D
Sbjct: 3 IQPRKRFGQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEID 62
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLL-- 142
+ L ++F + +I GD L LP + VANIPY I+ P+ KLL
Sbjct: 63 RDLWTILNKKFGQ---QDNFHLIPGDFLSLKPEQLPPVNKVVANIPYNITGPILEKLLGS 119
Query: 143 ---FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
P ++ ++ QKE A RLVA P K Y LSV Q A + V + F PP
Sbjct: 120 IAHPFTPPYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPP 179
Query: 200 PKVDSSVVRIEPR 212
P+VDS+V+++ PR
Sbjct: 180 PRVDSAVIQLLPR 192
>gi|347727044|gb|AEP19880.1| dimethyladenosine transferase [Exiguobacterium sp. 11-28]
Length = 292
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 128/228 (56%), Gaps = 21/228 (9%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A + +LEIGPG G+LT++ + K V+A+E+
Sbjct: 18 GFSFKKSLGQNFLIDLNILNKIVDAAELGEASGVLEIGPGIGSLTEQSAKRAKKVVALEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYF-----DI-CVANIPYQIS 134
D R++ L+ P+ + VI GD L+ D+ +F DI VAN+PY ++
Sbjct: 78 DQRLLPILEDTMSPYPH---VHVIHGDALELDIQSIVEREFFSQGIEDISVVANLPYYVT 134
Query: 135 SPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKN 194
+P+ +LL Q FR ++M QKE A R+ A+PG K Y LS+ Q +A + V K+
Sbjct: 135 TPIIMRLLESQIKFRSLVMMIQKEVAERIGAKPGTKAYGSLSIAIQYYAEANVSFIVPKS 194
Query: 195 NFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL----RICFIRKNKTL 238
F P P VDS+V+ ++ R P+P V+ V+ + F R F ++ KT+
Sbjct: 195 VFMPAPNVDSAVITLKMR-PKPAVD-VKDEAFFFELARASFAQRRKTI 240
>gi|425435045|ref|ZP_18815505.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9432]
gi|389675218|emb|CCH95619.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9432]
Length = 268
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 126/243 (51%), Gaps = 19/243 (7%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH LK+ +++ I+ A ++S D +LEIGPGTG LT++LL+ ++V+AVE+D
Sbjct: 3 IQPRKRFGQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEID 62
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLL-- 142
+ L ++F + +I GD L LP + VANIPY I+ P+ KLL
Sbjct: 63 RDLWTILNKKFGQ---QDNFHLIPGDFLSLKPEQLPPVNKVVANIPYNITGPILEKLLGS 119
Query: 143 ---FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
P ++ ++ QKE A RLVA P K Y LSV Q A + V + F PP
Sbjct: 120 IAHPFTPPYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPP 179
Query: 200 PKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIF-------RLKNVLSML 251
P+VDS+V+++ PR P N + + F + K L + RL +L+ L
Sbjct: 180 PRVDSAVIQLLPRVLPNNVSNAAFLSTLVSLGFANRRKMLRNNLKNCLDSDRLIQILTQL 239
Query: 252 EKN 254
E N
Sbjct: 240 EIN 242
>gi|119504979|ref|ZP_01627056.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2080]
gi|119459265|gb|EAW40363.1| dimethyladenosine transferase [marine gamma proteobacterium
HTCC2080]
Length = 279
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 115/226 (50%), Gaps = 11/226 (4%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
GG + K GQ+ L++ ++++I + D I+EIGPG G LT+ L+ +G + A+E
Sbjct: 20 GGHAPRKRFGQNFLQDDGVIQAIARAISAHKDDHIVEIGPGQGALTESLVTSGCQLDAIE 79
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTF 139
LD + L F P R + GD LK D V N+PY IS+PL F
Sbjct: 80 LDRDLTTGLLAAFSIHP---RFTLHTGDALKFDYKALRADSRPLRVVGNLPYNISTPLIF 136
Query: 140 KLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
KLL + M Q+E RL AQPG K + RL V Q + VSHL V F PP
Sbjct: 137 KLLENTAIIGDMHFMLQREVVTRLAAQPGSKDWGRLGVMAQFYCDVSHLFDVPPEAFFPP 196
Query: 200 PKVDSSVVRIEPRK--PRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
PKV S++VR+ P P P + V +++ F ++ KTL + F+
Sbjct: 197 PKVQSAIVRLIPHATPPYPDCDVVRLGRTVQMAFAQRRKTLRNNFK 242
>gi|415883935|ref|ZP_11545964.1| dimethyladenosine transferase [Bacillus methanolicus MGA3]
gi|387591730|gb|EIJ84047.1| dimethyladenosine transferase [Bacillus methanolicus MGA3]
Length = 292
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 134/256 (52%), Gaps = 24/256 (9%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + +++ IV A + S +E+GPG G LT++L ++ K V+A E+
Sbjct: 19 GFSFKKSLGQNFLIDTNILKRIVDHAQLTSETGTIEVGPGIGALTEQLAKSSKKVVAFEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD----------ICVANIPYQISSP 136
D R++ L+ +PYSN + +I DVLK D+ + VAN+PY +++P
Sbjct: 79 DQRLLPILEETL--SPYSN-VTIIHQDVLKADVKAIIEKEFQGVNDLMVVANLPYYVTTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL R ++M QKE A R+ A+PG K Y LS+ Q + ++ V K F
Sbjct: 136 IIMKLLEENLPIRGIVVMLQKEVADRIAAKPGSKDYGSLSIAVQYYTEPDTVMVVPKTVF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF----LRICFIRKNKTLSSIFRLKNVLSMLE 252
P P VDS+V+R+ R+ P V + F ++ F + KTL L N+ S L
Sbjct: 196 VPQPNVDSAVIRLTRREVAPV--KVRDEAFFFQVIKASFAHRRKTL-----LNNLTSQLP 248
Query: 253 KNYRTLQALQSSQNSS 268
+A+ ++ N +
Sbjct: 249 NGKEKKEAILAALNQA 264
>gi|423334290|ref|ZP_17312070.1| dimethyladenosine transferase [Lactobacillus reuteri ATCC 53608]
gi|337728098|emb|CCC03188.1| dimethyladenosine transferase [Lactobacillus reuteri ATCC 53608]
Length = 297
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 127/229 (55%), Gaps = 23/229 (10%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI KS GQ+ L + ++++IV+ A I + D ++EIGPG G LT++L +A V+A+E+
Sbjct: 21 GIRTKKSFGQNFLTDLNVLKNIVEAADITANDNVIEIGPGIGALTEQLAQAAGEVLALEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----------CVANIPYQISS 135
D ++ L+ +PY N +KVI DVL+ +LP VAN+PY I+S
Sbjct: 81 DQDLIPVLKEVL--SPYDN-VKVINQDVLQANLPELIKKEFKDPSRPIKVVANLPYYITS 137
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLY--CRLSVNTQLHARVSHLLKVGK 193
P+ LL + +M QKE A RL A+PG K Y L++ Q+ A+++ V +
Sbjct: 138 PILMNLLASPVEWATICVMMQKEVAQRLTAKPGTKQYGALTLAIEYQMQAKIA--FDVSR 195
Query: 194 NNFRPPPKVDSSVVRIEPRKPRP-QVNPVEWD---GFLRICFIRKNKTL 238
F P P VDS++V + PR P P V P + GF+R CF + K+L
Sbjct: 196 KVFVPAPNVDSAIVVLTPR-PNPLPVQPFDKQKLFGFIRGCFAHRRKSL 243
>gi|347726994|gb|AEP19855.1| dimethyladenosine transferase [Exiguobacterium sp. EPVM]
Length = 292
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 128/228 (56%), Gaps = 21/228 (9%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A + +LEIGPG G+LT++ + K V+A+E+
Sbjct: 18 GFSFKKSLGQNFLIDLNILNKIVDAAELGEASGVLEIGPGIGSLTEQSAKRAKKVVALEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYF-----DI-CVANIPYQIS 134
D R++ L+ P+ + VI GD L+ D+ +F DI VAN+PY ++
Sbjct: 78 DQRLLPILEDTMSPYPH---VHVIHGDALELDIRDIVEREFFSQGIEDISVVANLPYYVT 134
Query: 135 SPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKN 194
+P+ +LL Q FR ++M QKE A R+ A+PG K Y LS+ Q +A + V K+
Sbjct: 135 TPIIMRLLESQIKFRSLVMMIQKEVAERIGAKPGTKAYGSLSIAIQYYAEANVSFIVPKS 194
Query: 195 NFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL----RICFIRKNKTL 238
F P P VDS+V+ ++ R P+P V+ V+ + F R F ++ KT+
Sbjct: 195 VFMPAPNVDSAVITLKMR-PKPAVD-VKDEAFFFEIARASFAQRRKTI 240
>gi|15644188|ref|NP_229237.1| dimethyladenosine transferase [Thermotoga maritima MSB8]
gi|27151616|sp|Q9X1F1.1|RSMA_THEMA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|4982002|gb|AAD36507.1|AE001795_10 dimethyladenosine transferase [Thermotoga maritima MSB8]
Length = 279
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 128/227 (56%), Gaps = 10/227 (4%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G+ K GQ L + + + IV+ A + DV++EIG G G LT++L + G VIA E+
Sbjct: 30 GVRLKKHLGQVFLSDDRIAKRIVKAAELTPEDVVVEIGAGAGTLTEELAKTGARVIAYEI 89
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDICVANIPYQISSPLTFKLLFHQ 145
D + LQ R P +++ D LK ++P ICV+NIPY I+ PL K++ +
Sbjct: 90 DESLAPILQERLSKYP---NVELRFEDFLKAKNVPEGAICVSNIPYNITGPLMEKII--E 144
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
F+ AI+M QKE R++A+PG K Y LSV Q V L V ++ F P P+VDS+
Sbjct: 145 WKFKRAIVMIQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVSRSCFVPNPEVDST 204
Query: 206 VVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VV ++ RKP ++ ++ F+ + F +K KTL + L+ LS+ E
Sbjct: 205 VVDLK-RKP-VDLDFEKFKKFVSMIFAKKRKTLKN--NLRPFLSIFE 247
>gi|282883264|ref|ZP_06291862.1| dimethyladenosine transferase [Peptoniphilus lacrimalis 315-B]
gi|281296894|gb|EFA89392.1| dimethyladenosine transferase [Peptoniphilus lacrimalis 315-B]
Length = 288
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 117/226 (51%), Gaps = 15/226 (6%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L F K+ GQ+ L + +V IV A + D +LEIGPG G LT++L K V+
Sbjct: 14 LKKYNFRFSKTLGQNFLIDGNIVRKIVDSAEVSEADNVLEIGPGIGTLTEELALRAKKVV 73
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY----------FDICVANIPYQ 132
++E+D R+ L+ ++ PY N +K+I D LK DL F + VAN+PY
Sbjct: 74 SIEIDKRLEDLLE---ETLPYDN-VKIIYKDFLKLDLKTLIDEEFKGQNFKV-VANLPYY 128
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ KLL + +M QKE A R AQP K Y LSV Q R + V
Sbjct: 129 ITTPIIEKLLLNSENIEIINVMIQKEVAKRFTAQPQTKDYGSLSVFIQFFCRAFYEFTVP 188
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTL 238
+ F P P VDS V ++E ++ P ++ E+ +R F ++ KTL
Sbjct: 189 RTVFMPKPNVDSGVCKLEVKRDLPNIDREEFFKIVRAAFSKRRKTL 234
>gi|297205158|ref|ZP_06922554.1| dimethyladenosine transferase [Lactobacillus jensenii JV-V16]
gi|297149736|gb|EFH30033.1| dimethyladenosine transferase [Lactobacillus jensenii JV-V16]
Length = 293
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 139/259 (53%), Gaps = 17/259 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + I+ A IKS D +LEIGPG G+LT+++L G V+A E+D +
Sbjct: 26 KNLGQNFLISLNKINDILDAAEIKSDDQVLEIGPGIGSLTEQMLLRGAKVLAYEIDQDLP 85
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ ++ + K++ D+LK D +FD+ VAN+PY I++P+
Sbjct: 86 EILHNELPQKVENKHLDDVFKLVMKDILKADFKEDIGDFFDLNKPIKVVANLPYYITTPI 145
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L AF +M QKE A RL A G+K Y L++ Q V + V NF
Sbjct: 146 IFALAKSDLAFESLTLMMQKEVAERLCASSGNKEYGPLTIFVQTQMAVKMAVMVDHTNFN 205
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYR 256
P PKVDS+VV ++P + V E ++ +++CF ++ KTL++ LK+++ E+
Sbjct: 206 PQPKVDSAVVVLKPLAKKVDVGDTENFEHVVKMCFSQRRKTLNN--NLKSLVKNGEERKN 263
Query: 257 TLQALQSSQNSSLGNTEIG 275
LQ L + + IG
Sbjct: 264 LLQMLDLPEKARPEELTIG 282
>gi|418324798|ref|ZP_12936024.1| dimethyladenosine transferase [Staphylococcus pettenkoferi VCU012]
gi|365224121|gb|EHM65388.1| dimethyladenosine transferase [Staphylococcus pettenkoferi VCU012]
Length = 296
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 127/228 (55%), Gaps = 17/228 (7%)
Query: 29 SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDS 88
+F KS GQ+ L + ++ I+ + I +T ++EIGPG G+LT++L + + V+A E+D
Sbjct: 22 NFKKSLGQNFLVDVNIIRKIIDASEIDATTGVIEIGPGMGSLTEQLAKKAQNVLAFEIDQ 81
Query: 89 RMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF----------DICVANIPYQISSPLT 138
R++ L PY N ++VI D+LK D+ ++ + VAN+PY I++P+
Sbjct: 82 RLMPILDETL--APYPN-VQVINEDILKADIAHYVQTYLGHCERIMVVANLPYYITTPIL 138
Query: 139 FKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
L+ ++M QKE RL AQ G K Y LS+ Q + S +L V K F P
Sbjct: 139 LNLMQRSLPIDGYVVMMQKEVGERLNAQVGTKAYGSLSIVAQYYTETSKVLTVPKTVFMP 198
Query: 199 PPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
PP VDS VV++ R P PQ++ + D F ++ F ++ KT+++ ++
Sbjct: 199 PPNVDSIVVKLMQR-PYPQIDIDDEDRFFKMTKGAFTQRRKTINNNYQ 245
>gi|169335103|ref|ZP_02862296.1| hypothetical protein ANASTE_01510 [Anaerofustis stercorihominis DSM
17244]
gi|169257841|gb|EDS71807.1| dimethyladenosine transferase [Anaerofustis stercorihominis DSM
17244]
Length = 287
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 114/211 (54%), Gaps = 14/211 (6%)
Query: 30 FHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSR 89
F K GQ+ L + +V IV + +V+LE+GPG G+LT+KL E V AVE+D+R
Sbjct: 20 FKKDLGQNFLTDENIVLKIVDSLELTDDEVVLEVGPGMGSLTQKLAERAYKVYAVEIDTR 79
Query: 90 MVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF--DIC--------VANIPYQISSPLTF 139
V L+ ++ N +++I D+LKTDL D ++N+PY I+SP+
Sbjct: 80 AVNMLE---ETLSEYNNIEIINKDILKTDLREILEDAIKENRKIKFISNLPYYITSPILM 136
Query: 140 KLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
K+L + F ++M QKE A RL A+ K Y ++ +A V L V K F P
Sbjct: 137 KVLEDKVMFENIVVMLQKEVATRLNAKVNTKDYSSFTIAVDYYAEVERLFNVPKTVFVPM 196
Query: 200 PKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC 230
PKVDS+V+R+ PRK +V+ D F ++
Sbjct: 197 PKVDSTVLRVVPRK-ESKVDVDNQDMFFKVV 226
>gi|113866543|ref|YP_725032.1| dimethyladenosine transferase [Ralstonia eutropha H16]
gi|122947140|sp|Q0KEA7.1|RSMA_RALEH RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|113525319|emb|CAJ91664.1| dimethyladenosine transferase (rRNA methylation) [Ralstonia
eutropha H16]
Length = 280
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 105/203 (51%), Gaps = 18/203 (8%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ IV ++ DV++EIGPG G LT LLE + VELD +V
Sbjct: 13 KRFGQNFLVDDTIIHGIVNAISPQADDVLVEIGPGLGALTDPLLERIPQMQVVELDRDLV 72
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
L+RR Y RL+V GD L D + V N+PY ISSPL F L+
Sbjct: 73 ERLRRR-----YGERLQVHAGDALAFDFDKLAVPGRPLRIVGNLPYNISSPLLFHLMDFA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
R M QKE R+VA+PG K + RLS+ Q+ + H+L V F PPPKVDS+
Sbjct: 128 DHVRDQHFMLQKEVVERMVAEPGSKAFGRLSIMLQVRYYMEHVLDVPPGAFNPPPKVDSA 187
Query: 206 VVRIEPRKPRPQVNPVEWDGFLR 228
VVR+ P P DG LR
Sbjct: 188 VVRMIPW-------PRHSDGRLR 203
>gi|448440575|ref|ZP_21588653.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halorubrum saccharovorum DSM 1137]
gi|445689961|gb|ELZ42182.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halorubrum saccharovorum DSM 1137]
Length = 295
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 112/199 (56%), Gaps = 10/199 (5%)
Query: 60 ILEIGPGTGNLTKKLLEA-----GKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV 114
+LEIG G G LT +LL A G++ + +E D L+ F + L VI+GD
Sbjct: 59 LLEIGGGAGALTDRLLAAVAAENGRLSV-IERDGVFADFLREEFATAVDDGLLDVIEGDA 117
Query: 115 LKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCR 174
L DLP F CVAN+PY +SS + F+LL P + ++MFQ EFA R+VA G+ Y R
Sbjct: 118 LDVDLPPFTACVANLPYGVSSEIAFRLL---PEGKPLVLMFQAEFADRMVASAGESEYGR 174
Query: 175 LSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDGFLRICFIR 233
LSV+ Q +A V + +V K F P P V+S+VVR PR P +V + + F++ F +
Sbjct: 175 LSVSAQHYAAVEIVERVPKEAFDPQPAVESAVVRCTPRDPEYEVGDEAFFLRFVKALFTQ 234
Query: 234 KNKTLSSIFRLKNVLSMLE 252
+ KT+ + R +S L+
Sbjct: 235 RRKTVRNAVRNTGHISGLD 253
>gi|186685005|ref|YP_001868201.1| dimethyladenosine transferase [Nostoc punctiforme PCC 73102]
gi|226732604|sp|B2J0A6.1|RSMA_NOSP7 RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|186467457|gb|ACC83258.1| dimethyladenosine transferase [Nostoc punctiforme PCC 73102]
Length = 286
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 131/249 (52%), Gaps = 30/249 (12%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTD------VILEIGPGTGNLTKKLLEAGKMV 81
I K QH LK+ +++I++ A +D ILEIGPGTG LT++LL + +
Sbjct: 2 IRPRKVFAQHWLKSEKALDAIIKAAECTESDRSPKGDCILEIGPGTGILTRRLLPLVQSL 61
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC----------VANIPY 131
IAVE+D + L ++ T ++QGD L DLP + + VANIPY
Sbjct: 62 IAVEIDRDLCQLLSKQLGKT---ENFLLLQGDFLTLDLPSYLVAFPNFQKPNKVVANIPY 118
Query: 132 QISSPLTFKLL--FHQP---AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVS 186
I+ P+ KLL P F +++ QKE A RL A+PG K + LSV Q A
Sbjct: 119 NITGPIIEKLLGTIANPNPEPFDSIVLLVQKEVAERLYAKPGSKTFGALSVRVQYLAECE 178
Query: 187 HLLKVGKNNFRPPPKVDSSVVRIEPRKPR-PQVNPVEWDGFLRICFIRKNKTLSSIFRLK 245
+ V + F P PKVDS+VVR+ PRK P +NP + + FL++ F K K L +
Sbjct: 179 LICTVPASAFHPAPKVDSAVVRLRPRKIEIPALNPRQLETFLKLGFGAKRKMLRN----- 233
Query: 246 NVLSMLEKN 254
N+ S++E++
Sbjct: 234 NLQSVIERD 242
>gi|339006655|ref|ZP_08639230.1| ribosomal RNA methyltransferase [Brevibacillus laterosporus LMG
15441]
gi|338775864|gb|EGP35392.1| ribosomal RNA methyltransferase [Brevibacillus laterosporus LMG
15441]
Length = 295
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 136/254 (53%), Gaps = 25/254 (9%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G S KS GQ+ L + ++ +I+ A + ++EIGPG G LT++L A V+A+E+
Sbjct: 22 GFSLKKSLGQNFLTDINILHNIIDAAELSKDKAVIEIGPGIGALTEQLCRAAGKVMAIEI 81
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDIC-----VANIPYQISSP 136
D R++ L+ +PY N + V+ GDVLK D+ + C VAN+PY +++P
Sbjct: 82 DQRLLPILEDTL--SPYDN-ITVVHGDVLKLDVAALIAEHLSGCSGVSVVANLPYYVTTP 138
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ LL ++M QKE A R+ A+PG K Y LSV Q +A S + V + F
Sbjct: 139 ILMGLLESGIELDHIVVMIQKEVAERIAAKPGTKDYGSLSVAAQFYAETSIEMIVPASVF 198
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFRLKNVLSML-- 251
P P VDS+V+++ RK +P V + F R+ F ++ KTL L N+++
Sbjct: 199 IPRPNVDSAVIKLSIRK-QPIVEVADEKLFFRVVKASFAQRRKTL-----LNNLVTNYFG 252
Query: 252 -EKNYRTLQALQSS 264
EK + LQAL+ +
Sbjct: 253 KEKKEQALQALEEA 266
>gi|429730233|ref|ZP_19264881.1| dimethyladenosine transferase [Corynebacterium durum F0235]
gi|429147824|gb|EKX90842.1| dimethyladenosine transferase [Corynebacterium durum F0235]
Length = 588
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 12/223 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ + +P V IV A + + D +LE+GPG G+LT L++ + V AVE+D R+
Sbjct: 27 KKLGQNFVHDPNTVRRIVAAAEVTAQDHVLEVGPGLGSLTLALIDTVQDVTAVEIDPRLA 86
Query: 92 LELQR--RFQSTPYSNRLKVIQGDVLKTDLPYFD--------ICVANIPYQISSPLTFKL 141
EL +++ ++++L++I D L+ FD VAN+PY +S P+ L
Sbjct: 87 AELPATLSWRAPDHAHKLRLIVKDALQVTRQDFDDVGAPMPTALVANLPYNVSVPVLLHL 146
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L P ++M Q E A RL A PG K+Y SV + +V VGKN F P PK
Sbjct: 147 LEEFPTITRVLVMVQAEVADRLAAAPGSKVYGVPSVKASFYGQVRRAGAVGKNVFWPAPK 206
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRI--CFIRKNKTLSSIF 242
++S +VRI+ +P P V+ F I F ++ KTL +
Sbjct: 207 IESGLVRIDRFRPSPWPGGVKDSTFTLIDAAFAQRRKTLRAAL 249
>gi|390631024|ref|ZP_10258994.1| Ribosomal RNA small subunit methyltransferase A [Weissella confusa
LBAE C39-2]
gi|390483772|emb|CCF31342.1| Ribosomal RNA small subunit methyltransferase A [Weissella confusa
LBAE C39-2]
Length = 298
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 128/239 (53%), Gaps = 19/239 (7%)
Query: 15 SGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKK 73
+ P + Q + GI+ KS GQ+ L + ++++IV +K TD ++EIGPG G LT++
Sbjct: 8 ATPVRTQAIMNQFGINTKKSLGQNFLTDINILKNIVAAGDVKDTDNVVEIGPGIGALTEQ 67
Query: 74 LLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP------YFDIC-- 125
L A K V+A E+D R++ L PY N + ++ D+LK DL + D
Sbjct: 68 LARAAKQVVAFEIDDRLIPVLDHTM--APYDN-VTIVHNDILKVDLEKEFAKQFADTTAP 124
Query: 126 ---VANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLH 182
VAN+PY I++P+ ++L F ++M QKE A RL A+PG K Y L++ Q
Sbjct: 125 LKLVANLPYYITTPILMQVLQSGIHFDNIVVMMQKEVADRLSAEPGTKDYGSLTLAVQYR 184
Query: 183 ARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP---RPQVNPVEWDGFLRICFIRKNKTL 238
V + F P P VDS+++ + PR+P +P+ ++ F +I F+ + KTL
Sbjct: 185 MNAKLAFTVSRTAFVPNPNVDSAIISLTPREPLAVQPRDEKQLFELF-KIGFVMRRKTL 242
>gi|260893941|ref|YP_003240038.1| dimethyladenosine transferase [Ammonifex degensii KC4]
gi|260866082|gb|ACX53188.1| dimethyladenosine transferase [Ammonifex degensii KC4]
Length = 297
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 126/231 (54%), Gaps = 22/231 (9%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI K GQH L ++ IV+ A + D ++E+GPG G LT +LLE V+
Sbjct: 18 LAEWGIKPRKRWGQHFLVRREVLAKIVEAAELSPADTVVEVGPGLGVLTARLLEKAGKVV 77
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------------CVANIP 130
A+ELD R+ L+ RF P RL +++GD L+ D FD+ VAN+P
Sbjct: 78 AIELDPRLEAFLRARFGEHP---RLTLVRGDALECD---FDLLVQEARGFFPYKVVANLP 131
Query: 131 YQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLK 190
Y ++SPL +LL ++M QKE A+RL+A PG K Y LS+ Q S +
Sbjct: 132 YYLTSPLLLRLLTSPWRISLLVLMLQKEVALRLLASPGTKEYGSLSLLVQYRTLPSLVTF 191
Query: 191 VGKNNFRPPPKVDSSVVRIEPRKPRPQV---NPVEWDGFLRICFIRKNKTL 238
V +++F PPP+VDS+VVR+E R RP V + + G +R F ++ KTL
Sbjct: 192 VSRHSFYPPPEVDSAVVRLEVRT-RPSVEVGDESVFFGVVRAAFAKRRKTL 241
>gi|335420853|ref|ZP_08551888.1| dimethyladenosine transferase [Salinisphaera shabanensis E1L3A]
gi|334894155|gb|EGM32362.1| dimethyladenosine transferase [Salinisphaera shabanensis E1L3A]
Length = 263
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 111/216 (51%), Gaps = 14/216 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQH L +++ IV + D ++EIGPG G LT+ LLE + +E+D ++
Sbjct: 4 KRFGQHFLHERGVIDRIVSMLAPAADDALVEIGPGQGALTEPLLERVDRLSVIEIDRDLI 63
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC--------VANIPYQISSPLTFKLLF 143
EL+ R +RL+VI GD L+ D Y + V N+PY ISSPL F LL
Sbjct: 64 AELESR---AARDSRLEVIAGDALRID--YAALAERRGPLRLVGNLPYNISSPLLFALLG 118
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
M QKE R+ A+PG + Y RL+V+ A L V F PPPKV
Sbjct: 119 SAAPIIDMHFMLQKEVVDRMTAEPGSRDYGRLTVSVAARAHAQALFDVAPGAFNPPPKVM 178
Query: 204 SSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTL 238
SSVVR+ PR P +++ + +D + F ++ KTL
Sbjct: 179 SSVVRVTPRAPDFEIHDGQLFDQLVTAAFSQRRKTL 214
>gi|256851971|ref|ZP_05557358.1| dimethyladenosine transferase [Lactobacillus jensenii 27-2-CHN]
gi|260661459|ref|ZP_05862372.1| dimethyladenosine transferase [Lactobacillus jensenii 115-3-CHN]
gi|256615383|gb|EEU20573.1| dimethyladenosine transferase [Lactobacillus jensenii 27-2-CHN]
gi|260547914|gb|EEX23891.1| dimethyladenosine transferase [Lactobacillus jensenii 115-3-CHN]
Length = 297
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 139/259 (53%), Gaps = 17/259 (6%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM- 90
K+ GQ+ L + + I+ A IKS D +LEIGPG G+LT+++L G V+A E+D +
Sbjct: 30 KNLGQNFLISLNKINDILDAAEIKSDDQVLEIGPGIGSLTEQMLLRGAKVLAYEIDQDLP 89
Query: 91 -VL--ELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDI-----CVANIPYQISSPL 137
+L EL ++ ++ + K++ D+LK D +FD+ VAN+PY I++P+
Sbjct: 90 EILHNELPQKVENKHLDDVFKLVMKDILKADFKEDIGDFFDLNKPIKVVANLPYYITTPI 149
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
F L AF +M QKE A RL A G+K Y L++ Q V + V NF
Sbjct: 150 IFALAKSDLAFESLTLMMQKEVAERLCASSGNKEYGPLTIFVQTQMAVKMAVMVDHTNFN 209
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVE-WDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYR 256
P PKVDS+VV ++P + V E ++ +++CF ++ KTL++ LK+++ E+
Sbjct: 210 PQPKVDSAVVVLKPLAKKVDVGDTENFEHVVKMCFSQRRKTLNN--NLKSLVKNGEERKN 267
Query: 257 TLQALQSSQNSSLGNTEIG 275
LQ L + + IG
Sbjct: 268 LLQMLDLPEKARPEELTIG 286
>gi|410421565|ref|YP_006902014.1| dimethyladenosine transferase [Bordetella bronchiseptica MO149]
gi|427825394|ref|ZP_18992456.1| dimethyladenosine transferase [Bordetella bronchiseptica Bbr77]
gi|408448860|emb|CCJ60545.1| dimethyladenosine transferase [Bordetella bronchiseptica MO149]
gi|410590659|emb|CCN05751.1| dimethyladenosine transferase [Bordetella bronchiseptica Bbr77]
Length = 265
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 115/224 (51%), Gaps = 14/224 (6%)
Query: 28 ISFHKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
+S H+++ GQH L + +VESIV+ G D ++EIGPG LT+ LL+ + AV
Sbjct: 1 MSAHQARKRFGQHFLTDESVVESIVRAIGPARDDCVVEIGPGLSALTRPLLDRIDHLTAV 60
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD---ICVANIPYQISSPLTFKL 141
E+D + L+R++ + RL V++ D L D F V N+PY ISSPL F L
Sbjct: 61 EIDRDLAARLRRQYPA----ERLTVVEADALTVDFAQFGQGLRVVGNLPYNISSPLLFHL 116
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
+ R M Q+E R+VA+PG Y RLSV Q R+ L V F PPP+
Sbjct: 117 MGAAEQVRDQHFMLQREVIDRMVAEPGSGDYSRLSVMLQARYRMEKLFDVAPEAFDPPPR 176
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIF 242
V S+VVR+ P P ++ P F + F ++ K L +
Sbjct: 177 VVSAVVRMAP-LPADRLRPASDAAFETVVARAFSQRRKMLRRVL 219
>gi|347727108|gb|AEP19912.1| dimethyladenosine transferase [Exiguobacterium sp. N39]
Length = 292
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 128/228 (56%), Gaps = 21/228 (9%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A + +LEIGPG G+LT++ + K V+A+E+
Sbjct: 18 GFSFKKSLGQNFLIDLNILNKIVDAAELGEASGVLEIGPGIGSLTEQSAKRAKKVVALEI 77
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYF-----DI-CVANIPYQIS 134
D R++ L+ P+ + VI GD L+ D+ +F DI VAN+PY ++
Sbjct: 78 DQRLLPILEDTMSPYPH---VHVIHGDALELDIQAIVEREFFSQGIEDISVVANLPYYVT 134
Query: 135 SPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKN 194
+P+ +LL Q FR ++M QKE A R+ A+PG K Y LS+ Q +A + V K+
Sbjct: 135 TPIIMRLLESQIKFRSLVMMIQKEVAERIGAKPGTKAYGSLSIAIQYYAEANVSFIVPKS 194
Query: 195 NFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL----RICFIRKNKTL 238
F P P VDS+V+ ++ R P+P V+ V+ + F R F ++ KT+
Sbjct: 195 VFMPAPNVDSAVITLKMR-PKPAVD-VKDEAFFFEIARASFAQRRKTI 240
>gi|386817169|ref|ZP_10104387.1| dimethyladenosine transferase [Thiothrix nivea DSM 5205]
gi|386421745|gb|EIJ35580.1| dimethyladenosine transferase [Thiothrix nivea DSM 5205]
Length = 260
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 16/230 (6%)
Query: 31 HKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
H++K GQH L + +++ +++ ++ TD ++EIGPG G LT LLE + VE+D
Sbjct: 6 HQAKKRFGQHFLHDRNIIDKMLRALSLQPTDRVVEIGPGPGALTFPLLEMLPRLDVVEID 65
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD------ICVANIPYQISSPLTFKL 141
++ Q + Q+ +L + D LK D+P + N+PY IS+PL F
Sbjct: 66 RDVIAWWQEQPQA---QGKLHIHAQDALKLDIPGLRGDSEPLRLIGNLPYNISTPLIFHF 122
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L H+ R + M QKE R+ A+P K Y RLSV Q + +LLK+G F PPPK
Sbjct: 123 LQHREHIRDMLFMLQKEVVDRITAEPNSKDYSRLSVMVQYYCETHYLLKIGPGAFSPPPK 182
Query: 202 VDSSVVRIEPRKPRPQV--NPVEWDGFLRICFIRKNKTLSSIFRLKNVLS 249
VDS+VV ++P P V + ++ + F ++ KTL + LK +L+
Sbjct: 183 VDSAVVYLKPWATPPYVAKDEAQFGKLVAQAFSQRRKTLRNT--LKELLT 230
>gi|227544731|ref|ZP_03974780.1| dimethyladenosine transferase [Lactobacillus reuteri CF48-3A]
gi|338203745|ref|YP_004649890.1| dimethyladenosine transferase [Lactobacillus reuteri SD2112]
gi|227185271|gb|EEI65342.1| dimethyladenosine transferase [Lactobacillus reuteri CF48-3A]
gi|336448985|gb|AEI57600.1| dimethyladenosine transferase [Lactobacillus reuteri SD2112]
Length = 297
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 121/226 (53%), Gaps = 17/226 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI KS GQ+ L + ++++IV+ A I + D ++EIGPG G LT++L +A V+A+E+
Sbjct: 21 GIRTKKSFGQNFLTDLNVLKNIVEAADITANDNVIEIGPGIGALTEQLAQAAGEVLALEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----------CVANIPYQISS 135
D ++ L+ +PY N +KVI DVL+ +LP VAN+PY I+S
Sbjct: 81 DQDLIPVLKEVL--SPYDN-VKVINQDVLQANLPELIKKEFKDPSRPIKVVANLPYYITS 137
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN 195
P+ LL + +M QKE A RL A+PG K Y L++ + + V +
Sbjct: 138 PILMNLLASPVEWATICVMMQKEVAQRLTAKPGTKQYGELTLAIEYQMQAKIAFDVSRKV 197
Query: 196 FRPPPKVDSSVVRIEPRKPRPQVNPVEWD---GFLRICFIRKNKTL 238
F P P VDS++V + PR V P + GF+R CF + K+L
Sbjct: 198 FVPSPNVDSAIVVLTPRTNPLPVQPFDKQKLFGFIRGCFAHRRKSL 243
>gi|389805962|ref|ZP_10203105.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter thiooxydans LCS2]
gi|388446416|gb|EIM02449.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Rhodanobacter thiooxydans LCS2]
Length = 262
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 118/224 (52%), Gaps = 17/224 (7%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
KS GQH L + ++ IV + D ++EIGPG G LT LL A + A+ELD+ ++
Sbjct: 7 KSFGQHFLHDRRYIDRIVSAIAPRPEDFMVEIGPGEGALTLPLLAAAGRLTAIELDTDLI 66
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDL---------PYFDICVANIPYQISSPLTFKLL 142
+L+ R + L VI DVLK D P I N+PY ISSP+ F +
Sbjct: 67 PDLRSRAATV---GELHVIHADVLKVDFSALAHSHGAPQLRIA-GNLPYYISSPILFHCV 122
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
H A R M QKE R+ A+PG K+Y RLSV QL RV L V FRPPPKV
Sbjct: 123 EHAAAIRDMHFMLQKEVVERMAAEPGSKVYGRLSVMLQLACRVEPLFDVPPEAFRPPPKV 182
Query: 203 DSSVVRIEPRKPRPQVN---PVEWDGFLRICFIRKNKTLSSIFR 243
+S+VVR+ P P +++ P ++ F ++ KTL++ R
Sbjct: 183 ESAVVRLVP-LPVGELHDAPPEHVHAVVKAAFGQRRKTLANALR 225
>gi|430751838|ref|YP_007214746.1| dimethyladenosine transferase [Thermobacillus composti KWC4]
gi|430735803|gb|AGA59748.1| dimethyladenosine transferase [Thermobacillus composti KWC4]
Length = 300
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 128/243 (52%), Gaps = 22/243 (9%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G +F K+ GQ+ L + ++ IV A + + LEIGPG G LT++L A V A+EL
Sbjct: 29 GFTFRKALGQNFLVDANVLRKIVDAAELGPSKGALEIGPGIGALTEQLAMAAGKVAAIEL 88
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI----------CVANIPYQISSP 136
D R++ L+ F P +N ++++ GD LK DL VAN+PY +++P
Sbjct: 89 DRRLIPILEELF--APCAN-VEIVHGDALKLDLKQLIAERFAGLERVSVVANLPYYVTTP 145
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + ++M QKE A R+ A PG K Y LSV + A + V + F
Sbjct: 146 ILMKLLEDRLPLEHIVVMVQKEVAERMTAPPGGKEYGSLSVAVRYFAEPEVVCTVPRTVF 205
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFRLKNVLSMLEK 253
PPP VDS+VVR+ R RP V+ + F R+ F ++ KTL++ N+ ++L K
Sbjct: 206 VPPPNVDSAVVRLTLRA-RPPVDVTDEAMFFRVVHAAFAQRRKTLAN-----NLTALLGK 259
Query: 254 NYR 256
R
Sbjct: 260 ERR 262
>gi|425471346|ref|ZP_18850206.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9701]
gi|389882782|emb|CCI36782.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9701]
Length = 268
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 125/243 (51%), Gaps = 19/243 (7%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH LK+ +++ I+ A ++S D +LEIGPGTG LT++LL+ ++V+AVE+D
Sbjct: 3 IQPRKRFGQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEID 62
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLL-- 142
+ L ++F + +I GD L LP + VANIPY I+ P+ KLL
Sbjct: 63 RDLWTILNKKFGQ---QDNFHLIPGDFLSLKLEQLPPVNKVVANIPYNITGPILEKLLGS 119
Query: 143 -FH--QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
H P + ++ QKE A RLVA P K Y LSV Q A + V + F P
Sbjct: 120 IAHPFTPPYHSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPS 179
Query: 200 PKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTLSSIF-------RLKNVLSML 251
P+VDS+V+++ PR P NP + F + K L + RL +L+ L
Sbjct: 180 PRVDSAVIQLLPRVLPNNVSNPAFLSTLISWGFANRRKMLRNNLKNCLDSDRLSQILTQL 239
Query: 252 EKN 254
E N
Sbjct: 240 EIN 242
>gi|426401389|ref|YP_007020361.1| dimethyladenosine transferase [Candidatus Endolissoclinum patella
L2]
gi|425858057|gb|AFX99093.1| dimethyladenosine transferase [Candidatus Endolissoclinum patella
L2]
Length = 274
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLL-EAGKMV 81
+ AG IS KS GQH L + L I + AG ST +EIGPG G LT+ LL E + V
Sbjct: 9 ISAGRISARKSLGQHFLFDINLARRIARLAGDMSTGTTIEIGPGPGGLTRGLLLEGARKV 68
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD----ICVANIPYQISSPL 137
+AVE+DSR L+ T S RL +I+ D LK + VAN+PY I++ +
Sbjct: 69 VAVEIDSRANNFLKSLI--TAASGRLTLIKEDALKVNFTAISQPPRHIVANLPYNIATRI 126
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
LL + F +MFQ E A RL+A PG K+Y RLSV L+ + N F
Sbjct: 127 LLTLLRNPHDFASLTLMFQSEVADRLIANPGSKIYGRLSVLVSWLCTTQKLMNISPNAFI 186
Query: 198 PPPKVDSSVVRIEPR 212
PPPK+ SS+VR+ PR
Sbjct: 187 PPPKICSSLVRLVPR 201
>gi|282848961|ref|ZP_06258350.1| dimethyladenosine transferase [Veillonella parvula ATCC 17745]
gi|282581236|gb|EFB86630.1| dimethyladenosine transferase [Veillonella parvula ATCC 17745]
Length = 284
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 124/225 (55%), Gaps = 14/225 (6%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQ+ L +V+ IV A + + + +LE+GPG G LT+ L ++G V A+ELD
Sbjct: 21 IKMSKKLGQNFLIKRGIVDEIVHAAELTAGEPVLEVGPGIGTLTQGLAQSGADVTAIELD 80
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSPLTFKL 141
R++ L S Y N +++I GDVLK D+P F + VAN+PY I++P+ L
Sbjct: 81 RRLLEVLDTTLAS--YDN-VRIIHGDVLKLDVPTIMNHKPFKV-VANLPYYITTPIIMSL 136
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + ++M QKE A+R++A+PG K Y LSV Q + +L V +F P P
Sbjct: 137 LESKLPIERLVVMVQKEVALRMIAKPGTKDYGALSVAVQYYTEPDIVLDVPPKSFLPAPA 196
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFR 243
V SSV+R R +P V+ ++ F R+ F ++ KT S+ +
Sbjct: 197 VTSSVIRCVLRN-KPPVDVIDEKLFFRVVKAGFAQRRKTFSNTMK 240
>gi|418577126|ref|ZP_13141253.1| dimethyladenosine transferase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379324406|gb|EHY91557.1| dimethyladenosine transferase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 296
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 130/234 (55%), Gaps = 17/234 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G +F KS GQ+ L + ++ +I+ + I I+E+GPG G+LT++L ++ K V+
Sbjct: 16 LNQYGFNFKKSLGQNFLIDVNIIHNIIDASDIDEQTGIIEVGPGMGSLTEQLAKSAKKVM 75
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF----------DICVANIPYQ 132
A E+D R++ L+ PY N + VI D+LK D+ ++ + VAN+PY
Sbjct: 76 AFEIDQRLIPVLKDTM--GPYDN-VTVINEDILKADIAHYVTEHLADCEKIMVVANLPYY 132
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I++P+ L+ + ++M QKE RL AQ G K Y LS+ Q + S +L V
Sbjct: 133 ITTPILLNLMQQKLPIDGYVVMMQKEVGERLNAQVGTKAYGSLSIVAQYYTETSKVLTVP 192
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
K+ F PPP VDS VV++ R P P V+ + + F ++ F ++ KT+++ ++
Sbjct: 193 KSVFLPPPNVDSIVVKLMKR-PTPIVDIDDENKFFKMTKAAFSQRRKTINNNYQ 245
>gi|403253630|ref|ZP_10919931.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermotoga sp. EMP]
gi|418045493|ref|ZP_12683588.1| Ribosomal RNA small subunit methyltransferase A [Thermotoga
maritima MSB8]
gi|351676378|gb|EHA59531.1| Ribosomal RNA small subunit methyltransferase A [Thermotoga
maritima MSB8]
gi|402811164|gb|EJX25652.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Thermotoga sp. EMP]
Length = 260
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 129/231 (55%), Gaps = 10/231 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L G+ K GQ L + + + IV+ A + DV++EIG G G LT++L + G VI
Sbjct: 7 LKKYGVRLKKHLGQVFLSDDRIAKRIVKAAELTPEDVVVEIGAGAGTLTEELAKTGARVI 66
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDICVANIPYQISSPLTFKL 141
A E+D + LQ R P +++ D LK ++P ICV+NIPY I+ PL K+
Sbjct: 67 AYEIDESLAPILQERLSKYP---NVELRFEDFLKAKNVPEGAICVSNIPYNITGPLMEKI 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
+ + F+ AI+M QKE R++A+PG K Y LSV Q V L V ++ F P P+
Sbjct: 124 I--EWKFKRAIVMIQKEVGERILAKPGKKTYGYLSVVVQTFYEVKKLFDVSRSCFVPNPE 181
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS+VV ++ RKP ++ ++ F+ + F +K KTL + L+ LS+ E
Sbjct: 182 VDSTVVDLK-RKP-VDLDFEKFKKFVSMIFAKKRKTLKN--NLRPFLSIFE 228
>gi|418325010|ref|ZP_12936221.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU071]
gi|365229072|gb|EHM70240.1| dimethyladenosine transferase [Staphylococcus epidermidis VCU071]
Length = 296
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 127/230 (55%), Gaps = 17/230 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G +F KS GQ+ L + ++ I++ + I T ++E+GPG G+LT++L + K V+A E+
Sbjct: 20 GFNFKKSLGQNFLIDVNIINKIIEASHIDCTTGVIEVGPGMGSLTEQLAKNAKKVMAFEI 79
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP-----YFDIC-----VANIPYQISSP 136
D R++ L+ +PY N + +I D+LK D+ + C VAN+PY I++P
Sbjct: 80 DQRLIPVLKDTL--SPYDN-VTIINEDILKADIAKAVATHLQDCDKIMVVANLPYYITTP 136
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ L+ ++M QKE RL AQ G K Y LS+ Q + S +L V K F
Sbjct: 137 ILLNLMQQDIPIDGFVVMMQKEVGERLNAQVGTKAYGSLSIVAQYYTETSKVLTVPKTVF 196
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTLSSIFR 243
PPP VDS VV++ R+ P V + +GF ++ F ++ KT+++ ++
Sbjct: 197 MPPPNVDSIVVKLMQRQ-EPLVQVDDEEGFFKLAKAAFAQRRKTINNNYQ 245
>gi|425466335|ref|ZP_18845638.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9809]
gi|389831207|emb|CCI26228.1| Ribosomal RNA small subunit methyltransferase A [Microcystis
aeruginosa PCC 9809]
Length = 268
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 11/193 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH LK+ +++ I+ A ++S D +LEIGPGTG LT++LL+ ++V+AVE+D
Sbjct: 3 IQPRKRFGQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGARLVVAVEID 62
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLL-- 142
+ L ++F + +I GD L LP + VANIPY I+ P+ +LL
Sbjct: 63 RDLWTILNKKFGQ---QDNFHLIPGDFLSLKPEQLPPVNKVVANIPYNITGPILERLLGS 119
Query: 143 ---FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
P ++ ++ QKE A RLVA P K Y LSV Q A + V + F PP
Sbjct: 120 IAHPFTPPYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPRRAFSPP 179
Query: 200 PKVDSSVVRIEPR 212
P+VDS+V+++ PR
Sbjct: 180 PQVDSAVIQLLPR 192
>gi|453381110|dbj|GAC84215.1| ribosomal RNA small subunit methyltransferase A [Gordonia
paraffinivorans NBRC 108238]
Length = 286
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 122/238 (51%), Gaps = 17/238 (7%)
Query: 16 GPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
GP Q + L A G+ K+ GQ+ + + V IV +G+ DV+LE+GPG G+LT L
Sbjct: 11 GPAQIRELAAEVGVRPTKTLGQNFVHDANTVRRIVAASGVGPDDVVLEVGPGLGSLTLAL 70
Query: 75 LEAGKMVIAVELDSRMVLEL-QRRFQSTPY-SNRLKVIQGDVLKT---DLPYFDIC-VAN 128
L V+A+E+D + + Q + P S +VI D L+ DLP VAN
Sbjct: 71 LGVAGRVVAIEIDPVLAQRIPQTIAEYAPQQSGNFEVILADALQVARDDLPAVPTALVAN 130
Query: 129 IPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL 188
+PY +S P+ LL P R A++M Q E A RL A PG + Y SV + H RVS
Sbjct: 131 LPYNVSVPVLLHLLGLFPEIRTALVMVQAEVADRLAAPPGSRTYGVPSVKARYHGRVSRA 190
Query: 189 LKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI------CFIRKNKTLSS 240
VG+N F P PKV+S +VRIE R P + D R+ F ++ KT+ S
Sbjct: 191 GAVGRNVFWPEPKVESGLVRIE----RTDEYPTDPDFRQRVFDAIDAAFAQRRKTMRS 244
>gi|194467627|ref|ZP_03073614.1| dimethyladenosine transferase [Lactobacillus reuteri 100-23]
gi|194454663|gb|EDX43560.1| dimethyladenosine transferase [Lactobacillus reuteri 100-23]
Length = 297
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 21/228 (9%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
GI KS GQ+ L + ++++IV+ A I D ++EIGPG G LT++L +A V+A+E+
Sbjct: 21 GIHTKKSFGQNFLTDLNVLKNIVEAADITDNDNVIEIGPGIGALTEQLAQAAGEVLALEI 80
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----------CVANIPYQISS 135
D ++ L+ +PY N +KVI DVL+ +LP VAN+PY I+S
Sbjct: 81 DQDLIPVLKEVL--SPYDN-VKVINQDVLQANLPELIKKEFKDPSRPIKVVANLPYYITS 137
Query: 136 PLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLY--CRLSVNTQLHARVSHLLKVGK 193
P+ LL + +M QKE A RL A+PG K Y L++ Q+ A+++ V +
Sbjct: 138 PILMNLLASPVEWATICVMMQKEVAQRLTAKPGTKQYGALTLAIEYQMQAKIA--FDVSR 195
Query: 194 NNFRPPPKVDSSVVRIEPRKPRPQVNPVEWD---GFLRICFIRKNKTL 238
F P P VDS++V + PR V P + GF+R CF + K+L
Sbjct: 196 KVFVPSPNVDSAIVVLTPRTNPLPVQPFDKQKLFGFIRGCFAHRRKSL 243
>gi|212637885|ref|YP_002314405.1| dimethyladenosine transferase [Anoxybacillus flavithermus WK1]
gi|226729751|sp|B7GFH0.1|RSMA_ANOFW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|212559365|gb|ACJ32420.1| Dimethyladenosine transferase (rRNA methylation) [Anoxybacillus
flavithermus WK1]
Length = 295
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 124/225 (55%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L P ++ IV A + ++EIGPG G LT++L K V+A E+
Sbjct: 19 GFSFKKSLGQNFLIEPNILHRIVDFAQLSERTGVIEIGPGIGALTEQLARRAKKVVAFEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLP------YFDI----CVANIPYQISSP 136
D R++ L +PY+N + +I D+LK D+ + D+ VAN+PY +++P
Sbjct: 79 DQRLLPILADTL--SPYTN-VSIIHEDILKADVQQVIAEQFTDVDDIMVVANLPYYVTTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + R ++M QKE A R+ A+PG K Y L++ Q + ++ V + F
Sbjct: 136 IIMKLLTDRLPIRGMVVMLQKEVADRMAAKPGTKDYGSLTIAVQYYTHAETVMHVPRTVF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKTL 238
P P VDS+V+R+ R+ +P V+ D F +R F ++ KT+
Sbjct: 196 VPKPNVDSAVIRLLKRE-QPAVSVSNEDFFFAVVRASFGQRRKTI 239
>gi|419860461|ref|ZP_14383102.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Corynebacterium diphtheriae bv. intermedius str. NCTC
5011]
gi|387982855|gb|EIK56354.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Corynebacterium diphtheriae bv. intermedius str. NCTC
5011]
Length = 295
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ + +P V IV A + S D ++E+GPG G+LT LL+ + V AVE+D R+
Sbjct: 28 KKLGQNFVHDPNTVRMIVSAADLNSDDHVIEVGPGLGSLTLALLDTAQKVTAVEIDPRLA 87
Query: 92 --LELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLLFHQP 146
L L ++ +++RL +I D L D+ + VAN+PY +S P+ LL P
Sbjct: 88 QQLPLTVTERAGQFADRLNLIHKDALTVAPDDIDHPTALVANLPYNVSVPVLLHLLQIFP 147
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
R ++M Q E A RL A PG+K+Y SV + V +GKN F P PK++S +
Sbjct: 148 TIRRVLVMVQAEVADRLAADPGNKVYGVPSVKASFYGNVRRAGSIGKNVFWPAPKIESGL 207
Query: 207 VRIEPRKPRPQVNPVEWD------GFLRICFIRKNKTLSS 240
VRI+ P Q PV D + F ++ KTL +
Sbjct: 208 VRIDVFDPEHQPWPVTDDMRKAVFPLIDSAFAQRRKTLRA 247
>gi|269797689|ref|YP_003311589.1| dimethyladenosine transferase [Veillonella parvula DSM 2008]
gi|269094318|gb|ACZ24309.1| dimethyladenosine transferase [Veillonella parvula DSM 2008]
Length = 284
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 14/225 (6%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQ+ L +V+ IV A + + +LE+GPG G LT+ L ++G V A+ELD
Sbjct: 21 IKMSKKLGQNFLIKRGIVDKIVHAAELTVGEPVLEVGPGIGTLTQGLAQSGADVTAIELD 80
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY------FDICVANIPYQISSPLTFKL 141
R++ L S N +++I GDVLK D+P F + VAN+PY I++P+ L
Sbjct: 81 RRLLEVLDTTLAS---YNNVRIIHGDVLKLDVPTIMNHKPFKV-VANLPYYITTPIIMSL 136
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
L + ++M QKE A+R+VA+PG K Y LSV Q + +L V +F P P
Sbjct: 137 LESKLPIERLVVMVQKEVALRMVAKPGTKDYGALSVAVQYYTEPDIVLDVPPKSFLPAPA 196
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSSIFR 243
V SSV+R R +P V+ ++ F R+ F ++ KT S+ +
Sbjct: 197 VTSSVIRCVLRD-KPPVDVIDEKLFFRVVKAGFAQRRKTFSNTMK 240
>gi|375292730|ref|YP_005127269.1| dimethyladenosine transferase [Corynebacterium diphtheriae INCA
402]
gi|376250954|ref|YP_005137835.1| dimethyladenosine transferase [Corynebacterium diphtheriae HC03]
gi|376284381|ref|YP_005157591.1| dimethyladenosine transferase [Corynebacterium diphtheriae 31A]
gi|371577896|gb|AEX41564.1| dimethyladenosine transferase [Corynebacterium diphtheriae 31A]
gi|371582401|gb|AEX46067.1| dimethyladenosine transferase [Corynebacterium diphtheriae INCA
402]
gi|372112458|gb|AEX78517.1| dimethyladenosine transferase [Corynebacterium diphtheriae HC03]
Length = 295
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ + +P V IV A + S D ++E+GPG G+LT LL+ + V AVE+D R+
Sbjct: 28 KKLGQNFVHDPNTVRMIVSAADLNSDDHVIEVGPGLGSLTLALLDTAQKVTAVEIDPRLA 87
Query: 92 --LELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLLFHQP 146
L L ++ +++RL +I D L D+ + VAN+PY +S P+ LL P
Sbjct: 88 QQLPLTVAERAGQFADRLNLIHKDALTVAPDDIDHPTALVANLPYNVSVPVLLHLLQIFP 147
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
R ++M Q E A RL A PG+K+Y SV + V +GKN F P PK++S +
Sbjct: 148 TIRRVLVMVQAEVADRLAADPGNKVYGVPSVKASFYGNVRRAGSIGKNVFWPAPKIESGL 207
Query: 207 VRIEPRKPRPQVNPVEWD------GFLRICFIRKNKTLSS 240
VRI+ P Q PV D + F ++ KTL +
Sbjct: 208 VRIDVFDPEHQPWPVTDDMRKAVFPLIDSAFAQRRKTLRA 247
>gi|311070689|ref|YP_003975612.1| dimethyladenosine transferase [Bacillus atrophaeus 1942]
gi|419823447|ref|ZP_14346994.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus atrophaeus C89]
gi|310871206|gb|ADP34681.1| dimethyladenosine transferase [Bacillus atrophaeus 1942]
gi|388472420|gb|EIM09196.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Bacillus atrophaeus C89]
Length = 292
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 121/224 (54%), Gaps = 17/224 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + +++ IV AG+ ++EIGPG G LT++L + K V+A E+
Sbjct: 19 GFSFKKSLGQNFLIDTNILDRIVDHAGVTERTGVIEIGPGIGALTEQLAKRAKQVVAFEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFDIC-----VANIPYQISSP 136
D R++ L+ +PY N + VI DVLK D+ F C VAN+PY +++P
Sbjct: 79 DQRLLPILKDTL--SPYDN-VTVIHQDVLKADVRTVIEEQFHDCDEIMVVANLPYYVTTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + ++M QKE A R+ A P K Y LS+ Q + ++ V K F
Sbjct: 136 IIMKLLEENLPLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMTVPKTVF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKT 237
P P VDS+V+R+ R+ P V+ V F ++ F ++ KT
Sbjct: 196 VPQPNVDSAVIRLLLRE-GPAVDVVNEAFFFQLIKASFAQRRKT 238
>gi|339442002|ref|YP_004708007.1| hypothetical protein CXIVA_09380 [Clostridium sp. SY8519]
gi|338901403|dbj|BAK46905.1| hypothetical protein CXIVA_09380 [Clostridium sp. SY8519]
Length = 293
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 122/230 (53%), Gaps = 24/230 (10%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G +F K GQ+ L + ++E IV+ AGI TD +LEIGPG G +T+ L +A + V AVE+
Sbjct: 24 GFTFQKKFGQNFLIDSNILEEIVEAAGITKTDYVLEIGPGIGTMTQYLAQAARAVTAVEI 83
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF---------DICVANIPYQISSPL 137
D +++ L+ + P + ++I GD+LK DL VAN+PY I++P+
Sbjct: 84 DDKLIPILENTLEEFPNA---EIIHGDILKLDLNRLVEEKNNGNPIKVVANLPYYITTPI 140
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
+L + IM QKE A R+ PG K Y LS+ Q +A + +V + F
Sbjct: 141 IMELFESRVPMESITIMVQKEVADRMQTGPGSKDYGALSLAVQYYAEPEIVAEVPPSCFM 200
Query: 198 PPPKVDSSVVRI-EPRKPRPQVNPVEWD------GFLRICFIRKNKTLSS 240
P PKV S+V+R+ RKP PVE +R F ++ KTL++
Sbjct: 201 PQPKVGSAVIRLTRHRKP-----PVEVSDEKLLFAVIRASFNQRRKTLAN 245
>gi|339625306|ref|ZP_08661095.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Fructobacillus fructosus KCTC 3544]
Length = 295
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 123/236 (52%), Gaps = 15/236 (6%)
Query: 15 SGPYQGQG-LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKK 73
+ P + Q L G+ K GQ+ L + ++ IVQ A + D+++EIGPG G LT+
Sbjct: 8 ASPARTQAILNQYGLRAKKKFGQNFLTDGNILSGIVQAADLTKEDLVVEIGPGIGGLTEY 67
Query: 74 LLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--------- 124
L A K V+A E+D MV L PY N +++++ DVL+ DL
Sbjct: 68 LARAAKKVLAFEIDPDMVKILAETL--APYDN-VQIVEQDVLEADLKTVLAESFGEKSAV 124
Query: 125 -CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHA 183
VAN+PY I++P+ LL + ++M QKE A RL A+PG K Y L+V +A
Sbjct: 125 KVVANLPYYITTPILLALLQAGIHWEKLVVMMQKEVADRLSAKPGTKEYGVLTVMLDYYA 184
Query: 184 RVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP-RPQVNPVEWDGFLRICFIRKNKTL 238
V+ LKV F P P VDS+VV + P+ +P +P + ++ CF + K+L
Sbjct: 185 SVAIALKVPAKAFNPSPNVDSAVVTLTPKPAEKPVDHPKQLFSLVKACFAHRRKSL 240
>gi|166363194|ref|YP_001655467.1| dimethyladenosine transferase [Microcystis aeruginosa NIES-843]
gi|166085567|dbj|BAG00275.1| dimethyladenosine transferase [Microcystis aeruginosa NIES-843]
Length = 268
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 11/193 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I K GQH LK+ +++ I+ A ++S D +LEIGPGTG LT++LL+ ++V+AVE+D
Sbjct: 3 IQPRKRFGQHWLKDESILDRIIGAANLQSEDRVLEIGPGTGILTRRLLDGAQLVVAVEID 62
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLL-- 142
+ L ++F + +I GD L LP + VANIPY I+ P+ KLL
Sbjct: 63 RDLWTILNKKFGQ---QDNFHLIPGDFLSLKPEQLPPVNKVVANIPYNITGPILEKLLGS 119
Query: 143 ---FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
P ++ ++ QKE A RLVA P K Y LSV Q A + V F PP
Sbjct: 120 IAHPFTPPYQSITLLVQKEVAERLVAVPSTKAYSALSVRIQYLADCQWICDVPWRAFSPP 179
Query: 200 PKVDSSVVRIEPR 212
P+VDS+V+++ PR
Sbjct: 180 PRVDSAVIQLLPR 192
>gi|222100031|ref|YP_002534599.1| Dimethyladenosine transferase [Thermotoga neapolitana DSM 4359]
gi|254808100|sp|B9K8F0.1|RSMA_THENN RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|221572421|gb|ACM23233.1| Dimethyladenosine transferase [Thermotoga neapolitana DSM 4359]
Length = 260
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 10/231 (4%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
L GI K GQ L + + + IV++A +K DV++EIG G G LT++L + G VI
Sbjct: 7 LKKYGIRLKKHLGQVFLSDDRIAKRIVKEADLKPDDVVVEIGAGAGTLTEELAKTGARVI 66
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKT-DLPYFDICVANIPYQISSPLTFKL 141
A E+D + LQ R P +++ D LK D+P ICV+NIPY ++ P+ K+
Sbjct: 67 AYEIDEGLAPILQERLSKYP---NVELRFEDFLKARDVPEEAICVSNIPYSVTGPIMEKI 123
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
+ + F+ AI+M QKE R++++PG K Y LSV Q V L V ++ F P P+
Sbjct: 124 I--EWRFKKAIVMVQKEVGERILSKPGRKSYGYLSVVVQTFYEVRKLFDVSRSYFVPNPE 181
Query: 202 VDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLE 252
VDS VV E ++ +++ ++ F+ + F +K KTL + L+ LS+ E
Sbjct: 182 VDSVVV--EMKRKAVEIDFPQFKKFVSMIFSKKRKTLKN--NLRPFLSVFE 228
>gi|118587313|ref|ZP_01544740.1| dimethyladenosine transferase [Oenococcus oeni ATCC BAA-1163]
gi|421189200|ref|ZP_15646519.1| dimethyladenosine transferase [Oenococcus oeni AWRIB422]
gi|421191841|ref|ZP_15649111.1| dimethyladenosine transferase [Oenococcus oeni AWRIB548]
gi|118432302|gb|EAV39041.1| dimethyladenosine transferase [Oenococcus oeni ATCC BAA-1163]
gi|399970662|gb|EJO04953.1| dimethyladenosine transferase [Oenococcus oeni AWRIB548]
gi|399973957|gb|EJO08121.1| dimethyladenosine transferase [Oenococcus oeni AWRIB422]
Length = 292
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 110/191 (57%), Gaps = 10/191 (5%)
Query: 30 FHKSK--GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
H SK GQ+ L + +++ IVQ A I D ++EIGPG G+LT++L +A K V+A E+D
Sbjct: 22 LHASKRLGQNFLIDLNVLQEIVQGAAIGPDDTVIEIGPGIGSLTEQLAKAAKQVVAYEID 81
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI-----CVANIPYQISSPLTFKLL 142
+++ L + PY N ++++ D+LK D F VAN+PY I++P+ F LL
Sbjct: 82 KKLIPILSETLR--PYKN-VEIVNRDILKADFSIFAKNQSLKIVANLPYYITTPILFYLL 138
Query: 143 FHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKV 202
F+ +M QKE A RL A G K Y LS+ Q V +L V + +F P P V
Sbjct: 139 NSSLNFKSVTVMMQKEVAARLQAGVGSKDYGELSLAIQYRVNVEIILPVTRKSFMPSPNV 198
Query: 203 DSSVVRIEPRK 213
DS+VV++ P++
Sbjct: 199 DSAVVQLTPKE 209
>gi|429211577|ref|ZP_19202742.1| dimethyladenosine transferase [Pseudomonas sp. M1]
gi|428156059|gb|EKX02607.1| dimethyladenosine transferase [Pseudomonas sp. M1]
Length = 269
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ I++ K +LEIGPG G LT+ L+++G + +ELD ++
Sbjct: 12 KRFGQNFLHDAGVIHRILRAIAPKEGQHLLEIGPGQGALTEGLVDSGAQLDVIELDLDLI 71
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC------VANIPYQISSPLTFKLLFHQ 145
+L+ RF P ++ QGD LK D V N+PY IS+PL F LL H
Sbjct: 72 PQLKWRFGLKP---NFRLHQGDALKFDFATLPQAGEKLRVVGNLPYNISTPLIFHLLEHA 128
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
+ M QKE RL A+PG + RLS+ Q +V +L VG F PPPKV+S+
Sbjct: 129 GIIQDMHFMLQKEVVERLAAEPGGGDWGRLSIMVQYFCKVDYLFTVGPGAFNPPPKVESA 188
Query: 206 VVRIEP--RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+VR+ P P P + + +R F ++ KTL + R
Sbjct: 189 IVRLAPYAEPPHPAKDHRLLERIVREAFNQRRKTLRNTLR 228
>gi|288554650|ref|YP_003426585.1| dimethyladenosine transferase [Bacillus pseudofirmus OF4]
gi|288545810|gb|ADC49693.1| dimethyladenosine transferase [Bacillus pseudofirmus OF4]
Length = 302
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 126/225 (56%), Gaps = 17/225 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G +F KS GQ+ L + ++ +IV A + T +EIGPG G LT++L + V+A E+
Sbjct: 29 GFNFKKSLGQNFLIDTNVLRNIVDAANLDETSGAIEIGPGIGALTEQLAKRVDQVVAFEI 88
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL-----PYFD-----ICVANIPYQISSP 136
D R++ L+ +PY N +++I DVLK D+ +F + VAN+PY +++P
Sbjct: 89 DQRLLPVLKDTL--SPYDN-VQIIHSDVLKADINEAIKAHFKDGQDLMVVANLPYYVTTP 145
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + R ++M Q E A R+ A+PG K Y LS+ Q +A +L V + F
Sbjct: 146 ILMKLLELKLPIRGIVVMIQAEVAERIAAKPGTKDYGSLSIAAQYYAEAEKVLTVPASVF 205
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRI---CFIRKNKTL 238
P P+VDS+V+R+ R+ +P V ++ F ++ F + KT+
Sbjct: 206 VPQPRVDSAVLRLTIRQ-KPAVEVIDEQYFFKVFHASFANRRKTI 249
>gi|357384083|ref|YP_004898807.1| dimethyladenosine transferase [Pelagibacterium halotolerans B2]
gi|351592720|gb|AEQ51057.1| dimethyladenosine transferase [Pelagibacterium halotolerans B2]
Length = 281
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 106/195 (54%), Gaps = 10/195 (5%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVE 85
G+ K GQ+ L + L I + AG + ++E+GPG G LT+ LL AG K VIA+E
Sbjct: 18 GLRAKKELGQNFLLDLNLTARIARSAGDLTDVTVIEVGPGPGGLTRALLAAGAKKVIAIE 77
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF----DICVANIPYQISSPLTFKL 141
D R + L + Q+ Y RL+VI D L+ D VAN+PY I++PL
Sbjct: 78 RDERALPALAQISQA--YRGRLEVISADALEIDYRVLAEGRTKIVANLPYNIATPLLTGW 135
Query: 142 LFHQPA---FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRP 198
L +P F +MFQ+E A R+VA+PGDK Y RL V T + + +N F P
Sbjct: 136 LSQEPWPAWFESLTLMFQREVAERIVARPGDKAYGRLGVLTGWRGDARIAMNLDRNAFTP 195
Query: 199 PPKVDSSVVRIEPRK 213
PPKV SSVV I P++
Sbjct: 196 PPKVTSSVVHIVPKQ 210
>gi|448475155|ref|ZP_21602873.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halorubrum aidingense JCM 13560]
gi|445816626|gb|EMA66513.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Halorubrum aidingense JCM 13560]
Length = 304
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 110/207 (53%), Gaps = 17/207 (8%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIA-------------VELDSRMVLELQRRFQSTPYSNR 106
+LEIG G G LT +LL V A +E D L+R F +
Sbjct: 59 LLEIGGGAGALTDRLLANAAAVDAETAGSAPASHLSVIERDGAFADFLRREFSAAIDDGL 118
Query: 107 LKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQ 166
L VI+GD L DLP F CVAN+PY +SS + F+LL P + ++MFQ EFA R+VA
Sbjct: 119 LDVIEGDALDVDLPPFTACVANLPYGVSSEIAFRLL---PERKPLVLMFQAEFAERMVAS 175
Query: 167 PGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQV-NPVEWDG 225
G+ Y RLSV+ Q +A V + +V K F P P V+S++VR PR P +V + +
Sbjct: 176 AGESEYGRLSVSAQHYAAVEIVERVPKEAFDPQPAVESAIVRCTPRDPDYEVGDEAFFLR 235
Query: 226 FLRICFIRKNKTLSSIFRLKNVLSMLE 252
F++ F ++ KT+ + R +S L+
Sbjct: 236 FVKALFTQRRKTVRNAIRNTGHISGLD 262
>gi|86605619|ref|YP_474382.1| dimethyladenosine transferase [Synechococcus sp. JA-3-3Ab]
gi|119365853|sp|Q2JVW2.1|RSMA_SYNJA RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|86554161|gb|ABC99119.1| dimethyladenosine transferase [Synechococcus sp. JA-3-3Ab]
Length = 279
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 115/200 (57%), Gaps = 13/200 (6%)
Query: 31 HKSKGQHILKNPLLVESIVQKAGI----KSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
K GQH LK+P + E+IV+ A + + +LEIGPGTG LT++LL G V+AVE+
Sbjct: 5 RKRFGQHWLKDPAVHEAIVRAAQLPPPQRDPAWVLEIGPGTGQLTQRLLAQGVHVVAVEI 64
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGD-VLKTDLPYFDICVANIPYQISSPLTFKLL--F 143
D + LQ+RF P R +++GD + P + VANIPY ++ P+ K+L
Sbjct: 65 DRDLCRLLQKRFADQP---RFHLVEGDFLRLPLPPQPRLLVANIPYNLTGPILEKVLGSP 121
Query: 144 HQPA--FRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
QP F ++M QKE A RL A PG K Y LSV + A + +V + FRPPP+
Sbjct: 122 AQPVRQFERIVLMVQKELAERLQAGPGSKAYGALSVRVRYLAECELICRVPPSAFRPPPQ 181
Query: 202 VDSSVVRIEPRK-PRPQVNP 220
V+S+VVR+ PR P P +P
Sbjct: 182 VESAVVRLTPRPAPTPARDP 201
>gi|376248162|ref|YP_005140106.1| dimethyladenosine transferase [Corynebacterium diphtheriae HC04]
gi|376256772|ref|YP_005144663.1| dimethyladenosine transferase [Corynebacterium diphtheriae VA01]
gi|376289999|ref|YP_005162246.1| dimethyladenosine transferase [Corynebacterium diphtheriae C7
(beta)]
gi|372103395|gb|AEX66992.1| dimethyladenosine transferase [Corynebacterium diphtheriae C7
(beta)]
gi|372114730|gb|AEX80788.1| dimethyladenosine transferase [Corynebacterium diphtheriae HC04]
gi|372119289|gb|AEX83023.1| dimethyladenosine transferase [Corynebacterium diphtheriae VA01]
Length = 295
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ + +P V IV A + S D ++E+GPG G+LT LL+ + V AVE+D R+
Sbjct: 28 KKLGQNFVHDPNTVRMIVSAADLNSDDHVIEVGPGLGSLTLALLDTAQKVTAVEIDPRLA 87
Query: 92 --LELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLLFHQP 146
L L ++ +++RL +I D L D+ + VAN+PY +S P+ LL P
Sbjct: 88 QQLPLTVAERAGQFADRLNLIHKDALTVAPDDIDHPTALVANLPYNVSVPVLLHLLQIFP 147
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
R ++M Q E A RL A PG+K+Y SV + V +GKN F P PK++S +
Sbjct: 148 TIRRVLVMVQAEVADRLAADPGNKVYGVPSVKASFYGNVRRAGSIGKNVFWPAPKIESGL 207
Query: 207 VRIEPRKPRPQVNPVEWD------GFLRICFIRKNKTLSS 240
VRI+ P Q PV D + F ++ KTL +
Sbjct: 208 VRIDVFDPEHQPWPVTDDMRKAVFPLIDSAFAQRRKTLRA 247
>gi|78212718|ref|YP_381497.1| dimethyladenosine transferase [Synechococcus sp. CC9605]
gi|119365857|sp|Q3AKE0.1|RSMA_SYNSC RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|78197177|gb|ABB34942.1| dimethyladenosine transferase [Synechococcus sp. CC9605]
Length = 274
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 137/258 (53%), Gaps = 18/258 (6%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMV 81
+G G K GQH L + +++ I++ A ++STD +LE+GPG G LT++LL AG K V
Sbjct: 1 MGFSGHHARKRFGQHWLLDESVLQRIIEAADLQSTDRVLEVGPGRGALTERLLAAGLKAV 60
Query: 82 IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY-----FDICVANIPYQISSP 136
A+ELD +V L+ RF P + QGDVL+ L D VANIPY I+ P
Sbjct: 61 HAIELDRDLVQGLRDRFVVQPG---FSLHQGDVLEAPLELSDGRIADKVVANIPYNITGP 117
Query: 137 LTFKLLFH-----QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKV 191
L +L+ P ++ +++ QKE A R+ A+PG + LSV QL AR + V
Sbjct: 118 LLERLVGRLDRPVDPPYQRLVLLVQKEVAERIRARPGHSSFSALSVRMQLLARCHSVCPV 177
Query: 192 GKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
F+PPPKV S V+ +EP +V P D R+ + K L+ L+N L+ +
Sbjct: 178 PPRCFQPPPKVQSEVICLEPLPASERVMP---DLAARVESLLKQAFLARRKMLRNTLAGV 234
Query: 252 EKNYRTLQALQSSQNSSL 269
+ R L+ L +S SL
Sbjct: 235 AEPNR-LKDLAASAGFSL 251
>gi|375290516|ref|YP_005125056.1| dimethyladenosine transferase [Corynebacterium diphtheriae 241]
gi|376245350|ref|YP_005135589.1| dimethyladenosine transferase [Corynebacterium diphtheriae HC01]
gi|376287359|ref|YP_005159925.1| dimethyladenosine transferase [Corynebacterium diphtheriae BH8]
gi|371580187|gb|AEX43854.1| dimethyladenosine transferase [Corynebacterium diphtheriae 241]
gi|371584693|gb|AEX48358.1| dimethyladenosine transferase [Corynebacterium diphtheriae BH8]
gi|372107980|gb|AEX74041.1| dimethyladenosine transferase [Corynebacterium diphtheriae HC01]
Length = 295
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ + +P V IV A + S D ++E+GPG G+LT LL+ + V AVE+D R+
Sbjct: 28 KKLGQNFVHDPNTVRMIVSAADLNSDDHVIEVGPGLGSLTLALLDTAQKVTAVEIDPRLA 87
Query: 92 --LELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLLFHQP 146
L L ++ +++RL +I D L D+ + VAN+PY +S P+ LL P
Sbjct: 88 QQLPLTVAERAGQFADRLNLIHKDALTVAPEDIDHPTALVANLPYNVSVPVLLHLLQIFP 147
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
R ++M Q E A RL A PG+K+Y SV + V +GKN F P PK++S +
Sbjct: 148 TIRRVLVMVQAEVADRLAADPGNKVYGVPSVKASFYGNVRRAGSIGKNVFWPAPKIESGL 207
Query: 207 VRIEPRKPRPQVNPVEWD------GFLRICFIRKNKTLSS 240
VRI+ P Q PV D + F ++ KTL +
Sbjct: 208 VRIDVFDPEHQPWPVTDDMRKAVFPLIDSAFAQRRKTLRA 247
>gi|359770291|ref|ZP_09273773.1| ribosomal RNA small subunit methyltransferase A [Gordonia effusa
NBRC 100432]
gi|359312540|dbj|GAB16551.1| ribosomal RNA small subunit methyltransferase A [Gordonia effusa
NBRC 100432]
Length = 299
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 107/202 (52%), Gaps = 7/202 (3%)
Query: 16 GPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
GP Q + L A G+ K+ GQ+ + + V IV +G+ S D++LE+GPG G+LT L
Sbjct: 22 GPAQIRSLAAELGVRPTKTLGQNFVHDANTVRRIVSASGVGSDDIVLEVGPGLGSLTLAL 81
Query: 75 LEAGKMVIAVELDSRMVLELQRRFQSTPYSNR--LKVIQGDVLK---TDLPYFDIC-VAN 128
L V+AVE+D + L S R V+ D LK DLP VAN
Sbjct: 82 LAVAGSVVAVEIDPVLAKRLPTTVDEFAPSRRSDFTVVLADALKVTAADLPTRPTALVAN 141
Query: 129 IPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHL 188
+PY ++ P+ L+ P A++M Q E A RL A+PG ++Y SV + + VS
Sbjct: 142 LPYNVAVPVLLHLMAEIPTLTTALVMVQAEVADRLAAEPGSRVYGVPSVKARYYGTVSRA 201
Query: 189 LKVGKNNFRPPPKVDSSVVRIE 210
VG+N F P PKV+S +VRIE
Sbjct: 202 GAVGRNVFWPEPKVESGLVRIE 223
>gi|359424670|ref|ZP_09215782.1| ribosomal RNA small subunit methyltransferase A [Gordonia amarae
NBRC 15530]
gi|358239967|dbj|GAB05364.1| ribosomal RNA small subunit methyltransferase A [Gordonia amarae
NBRC 15530]
Length = 306
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 121/235 (51%), Gaps = 8/235 (3%)
Query: 16 GPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
GP Q + L A + K+ GQ+ + + V IV +GI D +LE+GPG G+LT L
Sbjct: 27 GPAQIRELAAELDVRPTKTLGQNFVHDANTVRRIVAASGIGPDDTVLEVGPGLGSLTLAL 86
Query: 75 LEAGKMVIAVELDSRMVLELQRRF--QSTPYSNRLKVIQGDVL---KTDLPYFDICVANI 129
L V+AVE+D ++ L R ++ + R +VI D + + DLP VAN+
Sbjct: 87 LAEAGRVVAVEIDPKLAARLPRTIAERAPGQAGRFEVITADAMSVRRADLPEPTALVANL 146
Query: 130 PYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLL 189
PY ++ P+ L+ P+ A++M Q E A RL A PG ++Y SV + + V+
Sbjct: 147 PYNVAVPVLLHLMAELPSITTALVMVQAEVADRLAADPGSRIYGVPSVKARYYGDVARAG 206
Query: 190 KVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGF--LRICFIRKNKTLSSIF 242
VG+N F P PKV+S +VRI P+ + + F + F ++ KT+ S
Sbjct: 207 AVGRNVFWPEPKVESGLVRIRRTDTYPRDDALRRQVFDVIDAAFAQRRKTMRSAL 261
>gi|239825621|ref|YP_002948245.1| dimethyladenosine transferase [Geobacillus sp. WCH70]
gi|259494250|sp|C5D363.1|RSMA_GEOSW RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|239805914|gb|ACS22979.1| dimethyladenosine transferase [Geobacillus sp. WCH70]
Length = 291
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 124/226 (54%), Gaps = 19/226 (8%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + ++ IV A + +EIGPG G LT++L K V+A E+
Sbjct: 19 GFSFKKSLGQNFLIDTNILRKIVDFAELSDETGAIEIGPGIGALTEQLARRAKKVVAFEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF---------DI-CVANIPYQISSP 136
D R++ L+ +PY N +++I DVLK D+ DI VAN+PY +++P
Sbjct: 79 DQRLLPILEDTL--SPYGN-IRIIHQDVLKADIHRVISEEFTGMTDIMVVANLPYYVTTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL + R ++M QKE A RL A+PG K Y LS+ Q + ++ V + F
Sbjct: 136 IIMKLLTDRLPIRGMVVMLQKEVADRLAAKPGTKDYGSLSIAIQYYTEAETVMTVPRTVF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGF----LRICFIRKNKTL 238
P P VDS+V+R+ RK +P V VE + F +R F ++ KT+
Sbjct: 196 IPQPNVDSAVIRLIKRK-QPPVK-VEDEAFFFQVVRASFAQRRKTI 239
>gi|159036383|ref|YP_001535636.1| dimethyladenosine transferase [Salinispora arenicola CNS-205]
gi|157915218|gb|ABV96645.1| dimethyladenosine transferase [Salinispora arenicola CNS-205]
Length = 289
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 16 GPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
GP + + L A G++ K GQ+ + +P V IV AG+ S DV+LE+GPG G+LT L
Sbjct: 6 GPAEIRDLAARLGVAPTKRLGQNFVHDPNTVRRIVTTAGLASNDVVLEVGPGLGSLTLAL 65
Query: 75 LEAGKMVIAVELDSRMVLELQRRF--QSTPYSNRLKVIQGDVLKTDL-----PYFDICVA 127
L V AVE+D + L + P + RL V + D L+ P VA
Sbjct: 66 LPVAAHVHAVEIDPVLAAALPETAVRHAGPAAARLSVHRADALRVTAGQLADPAPTALVA 125
Query: 128 NIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSH 187
N+PY ++ P+ LL P R ++M QKE A RLVA PG ++Y SV +ARV
Sbjct: 126 NLPYNVAVPVVLHLLAELPTLRHGLVMVQKEVADRLVAGPGSRVYGVPSVKLAWYARVRA 185
Query: 188 LLKVGKNNFRPPPKVDSSVVRIEPRKP 214
+V N F P P VDS +V R+P
Sbjct: 186 AGRVPPNVFWPVPNVDSGLVAFTRREP 212
>gi|88808454|ref|ZP_01123964.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. WH 7805]
gi|88787442|gb|EAR18599.1| putative rRNA (adenine-N6,N6)-dimethyltransferase [Synechococcus
sp. WH 7805]
Length = 280
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 129/242 (53%), Gaps = 17/242 (7%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAV 84
GG S K GQH L++ +++ I+ + + S D +LE+GPG G LT++LL + V AV
Sbjct: 4 GGHSPRKRFGQHWLRDERVLDQILDASELGSDDRVLEVGPGRGALTQRLLASTAAAVHAV 63
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD-----ICVANIPYQISSPLTF 139
ELD +V LQ RF +P + + +GDVL+ L D VANIPY I+ PL
Sbjct: 64 ELDRDLVAGLQDRFADSP---QFSLREGDVLEVPLTLPDGQRATKVVANIPYNITGPLLE 120
Query: 140 KLLFH-----QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKN 194
+L+ P ++ +++ QKE A R+ A+PG + LSV QL A S + V
Sbjct: 121 RLIGRLDQPIDPPYQRLVLLVQKEVAERIRARPGASSFSALSVRMQLLAHCSSVCSVPPR 180
Query: 195 NFRPPPKVDSSVVRIEPRKPRPQVNPVEW---DGFLRICFIRKNKTLSSIFRLKNVLSML 251
F+PPPKV S V+R++P + +PV + L+ F+ + K L + + L L
Sbjct: 181 CFQPPPKVHSEVIRLDPLPQEQRPDPVTCRRVECLLKQAFLARRKMLRNTLSVSQPLCEL 240
Query: 252 EK 253
E+
Sbjct: 241 EE 242
>gi|302865247|ref|YP_003833884.1| dimethyladenosine transferase [Micromonospora aurantiaca ATCC
27029]
gi|302568106|gb|ADL44308.1| dimethyladenosine transferase [Micromonospora aurantiaca ATCC
27029]
Length = 289
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 116/233 (49%), Gaps = 11/233 (4%)
Query: 16 GPYQGQGLGAG-GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKL 74
GP + + L A G++ K GQ+ + +P V IV AG+ DV LE+GPG G+LT L
Sbjct: 6 GPAEIRELAARLGVTPTKKLGQNFVHDPNTVRRIVTTAGLTPDDVALEVGPGLGSLTLAL 65
Query: 75 LEAGKMVIAVELDSRMVLELQR---RFQSTPYSNRLKVIQGDVLKT---DL--PYFDICV 126
L V AVELD + L RF T + RL V D L+ DL P V
Sbjct: 66 LPVAAHVHAVELDPALAAALPETAARFAGT-AAERLTVHPADALRVTADDLAGPAPTALV 124
Query: 127 ANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVS 186
AN+PY ++ P+ LL P R ++M QKE A RLVA PG K+Y SV +AR
Sbjct: 125 ANLPYNVAVPVVLHLLAELPTLRHGLVMVQKEVADRLVAGPGSKVYGIPSVKLAWYARSR 184
Query: 187 HLLKVGKNNFRPPPKVDSSVVRIEPRK-PRPQVNPVEWDGFLRICFIRKNKTL 238
KV N F P P VDS +V R+ PRP V + F ++ KTL
Sbjct: 185 AAGKVPPNVFWPVPNVDSGLVAFTRREPPRPDVPRKAVFAVVDAAFAQRRKTL 237
>gi|410453253|ref|ZP_11307211.1| ribosomal RNA small subunit methyltransferase A [Bacillus
bataviensis LMG 21833]
gi|409933376|gb|EKN70304.1| ribosomal RNA small subunit methyltransferase A [Bacillus
bataviensis LMG 21833]
Length = 292
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 137/256 (53%), Gaps = 28/256 (10%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
G SF KS GQ+ L + +++ IV A + +EIGPG G LT++L + K V+A E+
Sbjct: 19 GFSFKKSLGQNFLIDTNILKKIVSFANLHENSGAIEIGPGIGALTEQLARSSKKVVAFEI 78
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL------PYFDI----CVANIPYQISSP 136
D R++ LQ +PY N +++I DVL+ D+ + DI VAN+PY +++P
Sbjct: 79 DQRLLPILQDTL--SPYEN-VEIIHKDVLEADVQTVMEEEFKDIDDIMVVANLPYYVTTP 135
Query: 137 LTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNF 196
+ KLL R + M QKE A R+ A+PG K Y LS+ Q + ++ V K F
Sbjct: 136 IIMKLLEDHLPIRGIVCMLQKEVADRISAKPGTKDYGSLSIAIQYYTEAETVMIVPKTVF 195
Query: 197 RPPPKVDSSVVRIEPRKPRPQVNPVEWDGFL----RICFIRKNKTLSSIFRLKNVLSML- 251
P P VDS+V+R+ R+ +P V+ V+ + F R F ++ KTL L N+ S L
Sbjct: 196 VPQPNVDSAVIRLTKRE-KPAVS-VKDEAFFFQVTRSSFAQRRKTL-----LNNLTSQLP 248
Query: 252 ---EKNYRTLQALQSS 264
+K L AL +S
Sbjct: 249 DGKQKKEEILAALDAS 264
>gi|33594223|ref|NP_881867.1| dimethyladenosine transferase [Bordetella pertussis Tohama I]
gi|384205523|ref|YP_005591262.1| dimethyladenosine transferase [Bordetella pertussis CS]
gi|408414170|ref|YP_006624877.1| dimethyladenosine transferase [Bordetella pertussis 18323]
gi|62900576|sp|Q7VU11.1|RSMA_BORPE RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|33564298|emb|CAE43596.1| dimethyladenosine transferase [Bordetella pertussis Tohama I]
gi|332383637|gb|AEE68484.1| dimethyladenosine transferase [Bordetella pertussis CS]
gi|401776340|emb|CCJ61518.1| dimethyladenosine transferase [Bordetella pertussis 18323]
Length = 265
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 103/190 (54%), Gaps = 10/190 (5%)
Query: 28 ISFHKSK---GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAV 84
+S H+++ GQH L + +VESIV+ G D ++EIGPG LT+ LL+ + AV
Sbjct: 1 MSAHQARKRFGQHFLTDESVVESIVRAIGPARDDRVVEIGPGLSALTRPLLDRIDHLTAV 60
Query: 85 ELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFD---ICVANIPYQISSPLTFKL 141
E+D + L+R++ + RL V++ D L D F V N+PY ISSPL F L
Sbjct: 61 EIDRDLAARLRRQYPA----ERLTVVEADALTVDFAQFGQGLRVVGNLPYNISSPLLFHL 116
Query: 142 LFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPK 201
+ R M Q+E R+VA+PG Y RLSV Q R+ L V F PPP+
Sbjct: 117 MGAAEQVRDQHFMLQREVIDRMVAEPGSGDYSRLSVMLQARYRMEKLFDVAPEAFDPPPR 176
Query: 202 VDSSVVRIEP 211
V S+VVR+ P
Sbjct: 177 VVSAVVRMAP 186
>gi|420157495|ref|ZP_14664328.1| dimethyladenosine transferase [Clostridium sp. MSTE9]
gi|394756051|gb|EJF39190.1| dimethyladenosine transferase [Clostridium sp. MSTE9]
Length = 287
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 121/229 (52%), Gaps = 18/229 (7%)
Query: 23 LGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVI 82
LG G F K+ GQ+ L NP + + +++G +LE+GPG G LT++L E + V+
Sbjct: 14 LGRHGFHFSKALGQNFLINPTVCPRMAEQSGAAPETGVLEVGPGIGVLTRELAERAQKVV 73
Query: 83 AVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF----------DICVANIPYQ 132
++ELD R++ L+ Y N + V+ GD+LK DL +C AN+PY
Sbjct: 74 SIELDRRLLPVLEETLAD--YDN-VTVVNGDILKLDLKELLQREFAGMPVSVC-ANLPYY 129
Query: 133 ISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVG 192
I+SP+ +LL + +M QKE A R+ AQPG + ++V +A L +V
Sbjct: 130 ITSPVIMRLLEERLDITSLTVMVQKEAARRICAQPGTRECGAVTVAVHYYAEPEILFEVS 189
Query: 193 KNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGF---LRICFIRKNKTL 238
+ +F P P VDSSV+R+ RK P V GF +R F ++ KT+
Sbjct: 190 RGSFLPAPNVDSSVIRLTLRK-EPAVRVENEAGFFSLVRTAFGQRRKTM 237
>gi|389844073|ref|YP_006346153.1| dimethyladenosine transferase [Mesotoga prima MesG1.Ag.4.2]
gi|387858819|gb|AFK06910.1| dimethyladenosine transferase [Mesotoga prima MesG1.Ag.4.2]
Length = 265
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 126/231 (54%), Gaps = 12/231 (5%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELD 87
I +K+ GQ+ LK+ + IV+ + + I+EIG G+G+LT LLE G VI E+D
Sbjct: 8 IRLNKALGQNFLKSDRVSRRIVESVELNPSTTIVEIGVGSGSLTSILLEKGYRVIGFEID 67
Query: 88 SRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL---PYFDICVANIPYQISSPLTFKLLFH 144
+R E RR + R ++ D LK DL P VANIPY I+SP+ +++F
Sbjct: 68 TRFS-EGNRRLEG----ERCELRYEDFLKADLSTLPDSVTYVANIPYYITSPIIERIMFD 122
Query: 145 QPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDS 204
P+F A++M QKE+A RL A P K Y L+VN + V L +V + F P P+VDS
Sbjct: 123 GPSFDRAVLMVQKEYADRLTATPRTKEYGILTVNVNTFSEVRELFQVSRKEFIPQPEVDS 182
Query: 205 SVVRIE--PRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEK 253
V+ + P + ++ F+R CF ++ K L + LK+++ + E+
Sbjct: 183 MVIELSLLENPPIGEARRDQYRKFVRHCFSQRRKKLKN--NLKSIVDLPEE 231
>gi|38233472|ref|NP_939239.1| dimethyladenosine transferase [Corynebacterium diphtheriae NCTC
13129]
gi|376292899|ref|YP_005164573.1| dimethyladenosine transferase [Corynebacterium diphtheriae HC02]
gi|62900542|sp|Q6NIA2.1|RSMA_CORDI RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|38199732|emb|CAE49392.1| Putative dimethyladenosine transferase [Corynebacterium
diphtheriae]
gi|372110222|gb|AEX76282.1| dimethyladenosine transferase [Corynebacterium diphtheriae HC02]
Length = 295
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ + +P V IV A + S D ++E+GPG G+LT LL+ + V AVE+D R+
Sbjct: 28 KKLGQNFVHDPNTVRMIVSAADLNSDDHVIEVGPGLGSLTLALLDTAQKVTAVEIDPRLA 87
Query: 92 --LELQRRFQSTPYSNRLKVIQGDVLKT---DLPYFDICVANIPYQISSPLTFKLLFHQP 146
L L ++ +++RL +I D L D+ + VAN+PY +S P+ LL P
Sbjct: 88 QQLPLTVAERAGQFADRLNLIHKDALTVAPDDIDHPTALVANLPYNVSVPVLLHLLQIFP 147
Query: 147 AFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSV 206
R ++M Q E A RL A PG+K+Y SV + V +GKN F P PK++S +
Sbjct: 148 TIRRVLVMVQAEVADRLAADPGNKVYGVPSVKASFYGNVRRAGSIGKNVFWPAPKIESGL 207
Query: 207 VRIEPRKPRPQVNPVEWD------GFLRICFIRKNKTLSS 240
VRI+ P Q PV D + F ++ KTL +
Sbjct: 208 VRIDVFDPEHQPWPVTDDMRKAVFPLIDSAFAQRRKTLRA 247
>gi|406920860|gb|EKD58852.1| Dimethyladenosine transferase [uncultured bacterium]
Length = 265
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 120/226 (53%), Gaps = 17/226 (7%)
Query: 27 GISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVEL 86
I KS GQ+ LK+ ++ IV+ I S D ++EIGPG G LT+ L E K VIA+EL
Sbjct: 2 NIRAKKSLGQNFLKDEQVLARIVESGNISSEDTVIEIGPGQGALTELLAERCKKVIAIEL 61
Query: 87 DSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYF---------DICVANIPYQISSPL 137
D R++ LQ FQ Y ++++ D+LK +LP +ANIPY I++P+
Sbjct: 62 DDRLIPVLQENFQ---YDEHVEIVHDDILKINLPALIESNNLQQGYKVIANIPYYITAPI 118
Query: 138 TFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFR 197
LL + I+M QKE A R+ A+ G L+V+ Q ++ +L V ++ F
Sbjct: 119 IRLLLETKFPPSEIILMVQKEVAERITAKAG--AMSILAVSVQYYSDAKYLFTVPRSAFD 176
Query: 198 PPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRIC---FIRKNKTLSS 240
P PKVDS+V+RI + + N E F RI F K KTL +
Sbjct: 177 PVPKVDSAVIRIMNHESGSKENKEETKKFFRIVRAGFSAKRKTLEN 222
>gi|73540206|ref|YP_294726.1| dimethyladenosine transferase [Ralstonia eutropha JMP134]
gi|119365051|sp|Q475Q1.1|RSMA_RALEJ RecName: Full=Ribosomal RNA small subunit methyltransferase A;
AltName: Full=16S rRNA
(adenine(1518)-N(6)/adenine(1519)-N(6))-
dimethyltransferase; AltName: Full=16S rRNA
dimethyladenosine transferase; AltName: Full=16S rRNA
dimethylase; AltName: Full=S-adenosylmethionine-6-N',
N'-adenosyl(rRNA) dimethyltransferase
gi|72117619|gb|AAZ59882.1| dimethyladenosine transferase [Ralstonia eutropha JMP134]
Length = 278
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 115/235 (48%), Gaps = 26/235 (11%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ IV + DV++EIGPG G LT LLE + VELD +V
Sbjct: 13 KRFGQNFLVDDSIIHGIVNAINPLADDVLVEIGPGLGALTDPLLERVPQMQVVELDRDLV 72
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI------CVANIPYQISSPLTFKLLFHQ 145
L+RR Y +RL+V GD L D + V N+PY ISSPL F L+ +
Sbjct: 73 ERLRRR-----YGDRLQVHAGDALAFDFGRLAVPGRPLRIVGNLPYNISSPLLFHLMDYA 127
Query: 146 PAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSS 205
M QKE R+VA+PG K + RLS+ Q+ + H+L V +F PPPKVDS+
Sbjct: 128 DHVHDQHFMLQKEVVDRMVAEPGSKAFGRLSIMLQVRYHMEHVLDVPPGSFNPPPKVDSA 187
Query: 206 VVRIEP---------RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
VVR+ P R P + + F ++ K L+N LS L
Sbjct: 188 VVRMIPWPRTESGRLRSPHADCDITVLGDLVTAAFSQRRKV------LRNTLSFL 236
>gi|374365003|ref|ZP_09623099.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Cupriavidus basilensis OR16]
gi|373103375|gb|EHP44400.1| 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein
[Cupriavidus basilensis OR16]
Length = 273
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 116/237 (48%), Gaps = 30/237 (12%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
K GQ+ L + ++ IV + D ++EIGPG G LT+ LLE + VELD +V
Sbjct: 13 KRFGQNFLVDDGIIHGIVSAIDPQHGDTLVEIGPGLGALTQPLLERLPQMQVVELDRDLV 72
Query: 92 LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDIC--------VANIPYQISSPLTFKLLF 143
L+RR Y RL + GD L D + +C V N+PY ISSPL F L
Sbjct: 73 ERLRRR-----YGERLVIHAGDALAFD--FGKLCEAGKPLRIVGNLPYNISSPLLFHLAE 125
Query: 144 HQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVD 203
R M QKE R+VA+PG K + RLS+ Q+ + H+L V +F PPPKVD
Sbjct: 126 FADQVRDQHFMLQKEVVERMVAEPGSKAFGRLSIMLQVRYHMEHVLDVPPASFNPPPKVD 185
Query: 204 SSVVRIEP---------RKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
S+VVR+ P R P P N + F ++ K L+N LSML
Sbjct: 186 SAVVRMIPWPRQPDGQLRSPYPACNLTVLGDVVAAAFSQRRKV------LRNTLSML 236
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,656,018,656
Number of Sequences: 23463169
Number of extensions: 242523765
Number of successful extensions: 1237891
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5156
Number of HSP's successfully gapped in prelim test: 1670
Number of HSP's that attempted gapping in prelim test: 1220055
Number of HSP's gapped (non-prelim): 10775
length of query: 359
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 216
effective length of database: 9,003,962,200
effective search space: 1944855835200
effective search space used: 1944855835200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)