RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 018261
(359 letters)
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 278
Score = 207 bits (526), Expect = 1e-65
Identities = 170/324 (52%), Positives = 213/324 (65%), Gaps = 46/324 (14%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
QHILKNPL++ SI+ KA ++ TDV+LE+GPGTGN+T KLLE K V+A ELD R+V EL
Sbjct: 1 QHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELH 60
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMF 155
+R Q TP +++L+V+ GDVLKTDLP+FD CVAN+PYQISSP FKLL H+P FRCAI+MF
Sbjct: 61 KRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMF 120
Query: 156 QKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPR 215
Q+EFA+RLVA+PGDKLYCRLS+NTQL ARV HL+KVGKNNFRPPPKV+SSVVRIEP+ P
Sbjct: 121 QREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPP 180
Query: 216 PQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIG 275
P +N EWDG +RI F+RKNKTLS+ F+ V +LEKNYR ++
Sbjct: 181 PPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSV-------------- 226
Query: 276 TDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKR 335
+ + E DK+ +L F +KR
Sbjct: 227 --------------------------------HNIIIPEDFSIADKIQQILTSTGFSDKR 254
Query: 336 ASKLTQQEFLYLLSLFNKAGIHFS 359
A + +F+ LL FN GIHFS
Sbjct: 255 ARSMDIDDFIRLLHGFNAEGIHFS 278
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 322
Score = 175 bits (445), Expect = 7e-53
Identities = 40/274 (14%), Positives = 77/274 (28%), Gaps = 64/274 (23%)
Query: 28 ISFHKSKGQHILKNPLLVESIVQKAGIKST------DVILEIGPGTGNLTKKLLEAG--K 79
G L NP + I K + T +L++ PG G + +
Sbjct: 9 SKLKFFYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPR 68
Query: 80 MVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDI--------------- 124
+E S + L +F+ + L++++ D I
Sbjct: 69 QYSLLEKRSSLYKFLNAKFEG----SPLQILKRDPYDWSTYSNLIDEERIFVPEVQSSDH 124
Query: 125 ------CVANIPYQISSPLTFKLL--------FHQPAFRCAIIMFQKEFAMRLVAQPGDK 170
VAN+ + S L + L ++ ++ A +L+A+PG
Sbjct: 125 INDKFLTVANVTGEGSEGLIMQWLSCIGNKNWLYRFGKVKMLLWMPSTTARKLLARPGMH 184
Query: 171 LYCRLSVNTQLHARV---------------------SHLLKVGKNNFRPPPKVDSSVVRI 209
+ SV + + P ++V +
Sbjct: 185 SRSKCSVVREAFTDTKLIAISDANELKGFDSQCIEEWDPILFSAAEIWPTKGKPIALVEM 244
Query: 210 EPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFR 243
+P + WD R I K L+++
Sbjct: 245 DPID--FDFDVDNWDYVTRHLMILKRTPLNTVMD 276
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein
KsgA {Escherichia coli [TaxId: 562]}
Length = 252
Score = 134 bits (338), Expect = 5e-38
Identities = 66/224 (29%), Positives = 96/224 (42%), Gaps = 6/224 (2%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
Q+ L + +++SIV + ++EIGPG LT+ + E + +ELD + LQ
Sbjct: 1 QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQ 60
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYFD----ICVANIPYQISSPLTFKLLFHQPAFRCA 151
P + +L N+PY IS+PL F L + A
Sbjct: 61 THPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADM 120
Query: 152 IIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEP 211
M QKE RLVA P K Y RLSV Q + V +L+V + F PPPKVDS+VVR+ P
Sbjct: 121 HFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVP 180
Query: 212 RKPRPQVNPV--EWDGFLRICFIRKNKTLSSIFRLKNVLSMLEK 253
P F ++ KT+ + + +L
Sbjct: 181 HATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTG 224
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus
pneumoniae, Ermam [TaxId: 1313]}
Length = 245
Score = 120 bits (302), Expect = 8e-33
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 12/223 (5%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
Q+ L + ++ I+++ +K TD + EIG G G+LT KL + K V ++ELDS +
Sbjct: 8 SQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLS 67
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFD--ICVANIPYQISSPLTFKLLFHQPAFRCAI 152
+ + I D+L+ P V NIPY +S+ + K++F A +
Sbjct: 68 SEKLKLNTRVTL---IHQDILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESRASDIYL 124
Query: 153 IMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR 212
I+ + + ++ L + + LLK+ F P PKV+S ++++
Sbjct: 125 IVEEGFYKR------TLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRH 178
Query: 213 K-PRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKN 254
P + F+ R+ + L + + + + N
Sbjct: 179 TTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVN 221
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis,
Ermc' [TaxId: 1423]}
Length = 235
Score = 116 bits (291), Expect = 2e-31
Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 12/219 (5%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
Q+ + + ++ I+ + D I EIG G G+ T +L++ V A+E+D ++ +
Sbjct: 1 QNFITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTE 60
Query: 96 RRFQSTPYSNRLKVIQGDVLKTDLPYF--DICVANIPYQISSPLTFKLLFHQPAFRCAII 153
+ V+ D+L+ P NIPY IS+ + K++F +
Sbjct: 61 NKLVDHDNFQ---VLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVFDSI-ADEIYL 116
Query: 154 MFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPR- 212
+ + FA RL+ L++ +S L V + F P PKV+SS++R+ +
Sbjct: 117 IVEYGFAKRLLNT-----KRSLALFLMAEVDISILSMVPREYFHPKPKVNSSLIRLNRKK 171
Query: 213 KPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSML 251
+ +++ F+ ++ K + + + N L
Sbjct: 172 SRISHKDKQKYNYFVMKWVNKEYKKIFTKNQFNNSLKHA 210
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 52.1 bits (124), Expect = 1e-08
Identities = 19/90 (21%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 44 LVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPY 103
+ I+ A DV +++G GTG +T +L + V A++ + + + Q
Sbjct: 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGL 80
Query: 104 SNRLKVIQGDV--LKTDLPYFDICVANIPY 131
+ + +++GD +P DI V
Sbjct: 81 GDNVTLMEGDAPEALCKIPDIDIAVVGGSG 110
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 47.7 bits (112), Expect = 5e-07
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 45 VESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMV 91
+ ++Q A +K + +L++ G G++ K V+A +L ++
Sbjct: 4 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDIL 50
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 45.4 bits (107), Expect = 3e-06
Identities = 30/195 (15%), Positives = 58/195 (29%), Gaps = 37/195 (18%)
Query: 48 IVQKAGIKSTDVILEIGPGTGNLTKKLLEA---GKMVIAVELDSRMVLELQRRFQSTPYS 104
I+ + G++ ILE+G G+GN++ +L A + VE D + +
Sbjct: 77 IIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI 136
Query: 105 NRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLV 164
++ + D+ + Q + ++ +
Sbjct: 137 GNVRTSRSDI------------------------ADFISDQMYDAVIADIPDPWNHVQKI 172
Query: 165 AQ---PGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKP--RPQVN 219
A PG N + L + V+ RI R+ RP +
Sbjct: 173 ASMMKPGSVATF-YLPNFDQSEKTVLSLS--ASGMHHLETVELMKRRILVREGATRPASD 229
Query: 220 PVEWDGFLRICFIRK 234
+ F+ F K
Sbjct: 230 DLTHTAFI--TFAIK 242
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 45.6 bits (107), Expect = 4e-06
Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 19/172 (11%)
Query: 34 KGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA---GKMVIAVELDSRM 90
+G I P + I+ I D +LE G G+G ++ L +A VI+ E+
Sbjct: 77 RGTAITF-PKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDH 135
Query: 91 VLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRC 150
++ ++ S +L ++ D + DI A +
Sbjct: 136 HDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED-----------IKSLTFDAV 184
Query: 151 AIIMFQKEFAMRLVAQ---PGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPP 199
A+ M + + G + TQ+ + ++ +
Sbjct: 185 ALDMLNPHVTLPVFYPHLKHGGVCAVYVVNITQV-IELLDGIRTCELALSCE 235
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus
subtilis [TaxId: 1423]}
Length = 234
Score = 44.9 bits (105), Expect = 5e-06
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 48 IVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
+++ A ++ +L+IG G G+ + I V+ M
Sbjct: 8 MIKTAECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEM 50
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 44.5 bits (104), Expect = 9e-06
Identities = 21/114 (18%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 40 KNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLELQRRF 98
+ +I+Q + ++L++G GTG L+ + G K VI V++ S ++ +
Sbjct: 22 RTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDM-SSIIEMAKELV 80
Query: 99 QSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAI 152
+ +S+++ +++G + LP+ + I S L ++ +
Sbjct: 81 ELNGFSDKITLLRGKLEDVHLPFPKVD------IIISEWMGYFLLYESMMDTVL 128
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 43.8 bits (102), Expect = 1e-05
Identities = 20/104 (19%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Query: 30 FHKSKGQHILKNPL---LVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA-GKMVIAVE 85
F S+ +H + NP ++ + +K IL++G G+G + G ++
Sbjct: 4 FTISESEHRIHNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGID 63
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANI 129
+ S + +RR + S R+ I D A +
Sbjct: 64 MSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACV 107
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 44.1 bits (103), Expect = 1e-05
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 46 ESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLELQRRFQSTPYS 104
+ I Q I V+L++G GTG L+ +AG K V+ V+ S ++ + +
Sbjct: 25 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQ-SEILYQAMDIIRLNKLE 83
Query: 105 NRLKVIQGDVLKTDLP 120
+ + +I+G + + LP
Sbjct: 84 DTITLIKGKIEEVHLP 99
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 43.1 bits (101), Expect = 3e-05
Identities = 12/102 (11%), Positives = 32/102 (31%), Gaps = 11/102 (10%)
Query: 41 NPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA--GKMVIAVELDSRMV------- 91
P + + Q+ +K D +++G G GN + + E+
Sbjct: 201 LPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQY 260
Query: 92 --LELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPY 131
L+ + + +N ++ + + I ++
Sbjct: 261 EELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVIL 302
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 42.9 bits (100), Expect = 3e-05
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 46 ESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLELQRRFQSTPYS 104
S+ + V+L++G GTG L +AG + VI +E S + + ++
Sbjct: 23 NSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIEC-SSISDYAVKIVKANKLD 81
Query: 105 NRLKVIQGDVLKTDLPYFDICVANIPYQI 133
+ + +I+G V ++ V I +
Sbjct: 82 HVVTIIKGKV--EEVELPVEKVDIIISEW 108
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 229
Score = 41.9 bits (97), Expect = 5e-05
Identities = 22/142 (15%), Positives = 44/142 (30%), Gaps = 6/142 (4%)
Query: 26 GGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
G +FH+ +G + LL + + KS + G K + G V+ VE
Sbjct: 20 GKTAFHQEQG-----HQLLKKHLDTFLKGKSGLRVFFPLCGKAVEMKWFADRGHSVVGVE 74
Query: 86 LDSRMVLELQRRFQSTPYSNRLKVIQG-DVLKTDLPYFDICVANIPYQISSPLTFKLLFH 144
+ + E + + I G V K+ + +I + + +
Sbjct: 75 ISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFDLPRTNIGKFDMIW 134
Query: 145 QPAFRCAIIMFQKEFAMRLVAQ 166
AI ++ +
Sbjct: 135 DRGALVAINPGDRKCYADTMFS 156
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 41.1 bits (95), Expect = 1e-04
Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 45 VESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAG-KMVIAVELDSRMVLELQRRFQSTPY 103
+++ + + K D +L++G G G K AG V++ + + + R ++
Sbjct: 13 IKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR 72
Query: 104 SNRLKVIQGDVLKTDLP 120
++ D +
Sbjct: 73 RFKVFFRAQDSYGRHMD 89
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 40.5 bits (94), Expect = 1e-04
Identities = 14/115 (12%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
Query: 49 VQKAGIKSTDVILEIGPGTGNLTKKLLEAG--KMVIAVELDSRMVLELQRRFQSTPYSNR 106
++ IK IL +G G + + +V A+E R++ EL
Sbjct: 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIP 126
Query: 107 LKVIQGDVLKTDLPYFDI-CVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFA 160
+ + + + Q + + M +
Sbjct: 127 ILGDANKPQEYANIVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKAR 181
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 39.8 bits (92), Expect = 3e-04
Identities = 19/132 (14%), Positives = 43/132 (32%), Gaps = 8/132 (6%)
Query: 44 LVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA--GKMVIAVELDSRMVLELQRRFQST 101
LV ++ + + D+ +++G G G + ++ A K VE + +
Sbjct: 139 LVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDRE- 197
Query: 102 PYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAM 161
+ +K + L D +I++ + AF + KE
Sbjct: 198 -FRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVI--FVNNFAFGPEVDHQLKE--R 252
Query: 162 RLVAQPGDKLYC 173
+ G ++
Sbjct: 253 FANMKEGGRIVS 264
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 38.5 bits (88), Expect = 6e-04
Identities = 19/124 (15%), Positives = 33/124 (26%), Gaps = 6/124 (4%)
Query: 41 NPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQS 100
N L + + +L G L G V+ EL V
Sbjct: 6 NKDLQQ-YWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGE 64
Query: 101 TPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFH-QPAFRCAIIMFQKEF 159
P+ QGD P +I + + + F+ + A ++ +
Sbjct: 65 QPHITS----QGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERY 120
Query: 160 AMRL 163
L
Sbjct: 121 VQHL 124
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 38.1 bits (88), Expect = 7e-04
Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 5/82 (6%)
Query: 53 GIKSTDVILEIGPGTGNLTKKLLEAGKM--VIAVELDSRMVLELQRRFQSTPYSNRLKVI 110
++ + +L +G +G L + + AVE ++ +L + N + +
Sbjct: 53 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVR---ERNNIIPL 109
Query: 111 QGDVLKTDLPYFDICVANIPYQ 132
D K + ++ YQ
Sbjct: 110 LFDASKPWKYSGIVEKVDLIYQ 131
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 227
Score = 37.4 bits (86), Expect = 0.001
Identities = 10/84 (11%), Positives = 25/84 (29%), Gaps = 3/84 (3%)
Query: 49 VQKAGIKSTDVILEIGPGTGNLTKKLLEA---GKMVIAVELDSRMVLELQRRFQSTPYSN 105
++ IK +L +G +G + + + +E R++ EL +
Sbjct: 66 LKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIV 125
Query: 106 RLKVIQGDVLKTDLPYFDICVANI 129
+ + + V
Sbjct: 126 PILGDATKPEEYRALVPKVDVIFE 149
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738
{Erwinia carotovora [TaxId: 554]}
Length = 225
Score = 36.8 bits (84), Expect = 0.002
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
+LE+G G+ T +L E + VE
Sbjct: 24 LLELGSFKGDFTSRLQEHFNDITCVEASEEA 54
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 35.2 bits (79), Expect = 0.010
Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 7/79 (8%)
Query: 59 VILEIGPGTG----NLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV 114
++L G G ++ ++LLE G V + + LQ+R+ + + D+
Sbjct: 13 LVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDM 71
Query: 115 LKTDLPYFDICVANIPYQI 133
+D +
Sbjct: 72 --LKQGAYDEVIKGAAGVA 88
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 34.5 bits (78), Expect = 0.010
Identities = 18/134 (13%), Positives = 38/134 (28%), Gaps = 5/134 (3%)
Query: 32 KSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA--GKMVIAVELDSR 89
++ Q+++ NPL ++ + + +E+G G G + + I +++
Sbjct: 7 EANPQYVVLNPLEAKAKWRDLFGNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKS 66
Query: 90 MVLELQRRFQSTPYSN--RLKVIQGDVLKTDLP-YFDICVANIPYQISSPLTFKLLFHQP 146
++ + N L V D+ D N K
Sbjct: 67 VLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYK 126
Query: 147 AFRCAIIMFQKEFA 160
F E
Sbjct: 127 TFLDTFKRILPENG 140
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 34.9 bits (79), Expect = 0.011
Identities = 17/127 (13%), Positives = 40/127 (31%), Gaps = 3/127 (2%)
Query: 48 IVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRL 107
++ +L++ GTG + L+E G V +V+ +M+ + +
Sbjct: 48 LLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNR--RKEP 105
Query: 108 KVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFA-MRLVAQ 166
+ + + + D V + H P + + + + +
Sbjct: 106 AFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVR 165
Query: 167 PGDKLYC 173
PG L
Sbjct: 166 PGGLLVI 172
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain
{Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 34.3 bits (77), Expect = 0.015
Identities = 32/210 (15%), Positives = 60/210 (28%), Gaps = 18/210 (8%)
Query: 44 LVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA---GKMVIAVELDSRMVLELQRRFQS 100
+V+ +V A +LE G + EA + VE+D + +
Sbjct: 7 VVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWAEGI 66
Query: 101 TPYSNRLKVIQGDVLKTDLPYF----DICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQ 156
+ + L P + + I + +K F + +
Sbjct: 67 LADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAF 126
Query: 157 KEFAMRLVAQPGD---KLYCRLSVNTQLHARVSHLLKVGKNNFRPPP------KVDSSVV 207
E A+RL+ G + V L + GK + KV + V+
Sbjct: 127 LEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVI 186
Query: 208 RIEPRKPRPQVNPVEW--DGFLRICFIRKN 235
R + + + GF I +
Sbjct: 187 RFQKSGKGLSLWDTQESESGFTPILWAEYP 216
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 33.5 bits (75), Expect = 0.025
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 44 LVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRM 90
+ + + D L++ GTGNLT+ L K AV+L M
Sbjct: 26 FIIEKCVENNLVF-DDYLDLACGTGNLTENLCPKFKNTWAVDLSQEM 71
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Sulfolobus tokodaii [TaxId: 111955]}
Length = 224
Score = 32.5 bits (73), Expect = 0.050
Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 35 GQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLEL 94
G + L ++ + + +LEIG G G T + E V++VE++ +M
Sbjct: 50 GINTTALNL-GIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYA 108
Query: 95 QRRFQSTPYSN 105
+
Sbjct: 109 SKLLSYYNNIK 119
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 32.7 bits (73), Expect = 0.051
Identities = 9/66 (13%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 51 KAGIKSTDVILEIGPGTGNLTKKL-LEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKV 109
G D +++IG G ++ + + + R EL++ + P +
Sbjct: 46 GPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTP 105
Query: 110 IQGDVL 115
Sbjct: 106 AVKFAC 111
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 215
Score = 31.7 bits (71), Expect = 0.093
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 3/109 (2%)
Query: 36 QHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQ 95
+ P +V +++ A +K ILE+G G+G + E K + ++E
Sbjct: 58 GQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFA 117
Query: 96 RRFQSTPYSNRLKVIQGDVLK---TDLPYFDICVANIPYQISSPLTFKL 141
+R + VI GD K PY I V +I PL +L
Sbjct: 118 KRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKIPEPLIEQL 166
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 31.5 bits (71), Expect = 0.11
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 42 PLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA----GKMVIAVELDSRMVLELQRR 97
P IV + I +LE G G+G LT LL A G+ VI+ E + +R
Sbjct: 82 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQ-VISYEQRADHAEHARRN 140
Query: 98 FQSTP--YSNRLKVIQGDVLKTDLPYFDICVANI 129
+ +++ D+ ++LP + A +
Sbjct: 141 VSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL 174
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 224
Score = 31.4 bits (70), Expect = 0.11
Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 50 QKAGIKSTDVILEIGPGTGNLT---KKLLEAGKMVIAVELDSRMVLELQRRFQ 99
+ L++G G+G LT +++ VI ++ +V + +
Sbjct: 70 LFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVR 122
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 309
Score = 30.5 bits (68), Expect = 0.30
Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 7/84 (8%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSN-RLKVIQGDVLKTD 118
+L + TG + AG V V+ + + + ++ I D +K
Sbjct: 136 VLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFI 195
Query: 119 LPY------FDICVANIPYQISSP 136
+DI + + P
Sbjct: 196 QREERRGSTYDIILTDPPKFGRGT 219
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 251
Score = 30.1 bits (66), Expect = 0.31
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 29 SFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVE 85
+ ++ + + + VE I ++ + +L++ GTG T +L E G V+ ++
Sbjct: 14 TIYRRRIERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLD 70
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 30.0 bits (66), Expect = 0.42
Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 8/71 (11%)
Query: 41 NPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLE--------AGKMVIAVELDSRMVL 92
+ L I + KS IL IG G G + ++L VE + +
Sbjct: 25 DKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIA 84
Query: 93 ELQRRFQSTPY 103
+ +
Sbjct: 85 KYKELVAKISN 95
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 321
Score = 28.8 bits (63), Expect = 1.0
Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 6/93 (6%)
Query: 66 GTG----NLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPY 121
TG L K LLE G V L +R + + R + ++ GD+
Sbjct: 8 ITGQDGAYLAKLLLEKGYRVHG--LVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQ 65
Query: 122 FDICVANIPYQISSPLTFKLLFHQPAFRCAIIM 154
+ A + + ++
Sbjct: 66 RAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVV 98
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 28.4 bits (62), Expect = 1.1
Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 2/69 (2%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDL 119
+L+IG G G T +A + LD V + + +
Sbjct: 88 VLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDT- 146
Query: 120 PYFDICVAN 128
D +
Sbjct: 147 -SMDAIIRI 154
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella
flexneri [TaxId: 623]}
Length = 250
Score = 28.4 bits (63), Expect = 1.3
Identities = 23/125 (18%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 21 QGLGAGGISFHKSKGQHILKNPLLVESIVQKA-GIKS--TDVILEIGPGTGNLTKKLLEA 77
LG + F H K V KA GIK +++ G G L
Sbjct: 50 PKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV 109
Query: 78 GKMVIAVELDSRMVLELQRRFQ--------STPYSNRLKVIQGD---VLKTDLPYFDICV 126
G V +E + + L RL++I L P +
Sbjct: 110 GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169
Query: 127 ANIPY 131
+ +
Sbjct: 170 LDPMF 174
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB
{Streptomyces purpurascens [TaxId: 1924]}
Length = 256
Score = 28.4 bits (62), Expect = 1.3
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 60 ILEIGPGTGNLTKKLLEAGKMV-IAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTD 118
+L++G G G + + + + + +RRF ++R+ V +GD K
Sbjct: 85 VLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPL 144
Query: 119 LPYFDIC 125
D+
Sbjct: 145 PVTADVV 151
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa
(LmjF30.0810) {Leishmania major [TaxId: 5664]}
Length = 254
Score = 27.6 bits (60), Expect = 2.3
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 60 ILEIGPGTGNLTKKLLE-AGKMVIAVELDSRMV 91
L+ G G G +TK LL +E M+
Sbjct: 97 ALDCGAGIGRITKNLLTKLYATTDLLEPVKHML 129
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 27.5 bits (60), Expect = 2.3
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Query: 41 NPLLVESIVQKA-GIKSTDVILEIGPGTGNLTKKLLEA---GKMVIAVELDSRM 90
N V +V I I++ G G G L L+ G ++ +
Sbjct: 11 NDDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETL 64
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant
arborvitae (Thuja plicata) [TaxId: 3316]}
Length = 312
Score = 27.4 bits (59), Expect = 3.1
Identities = 8/59 (13%), Positives = 19/59 (32%), Gaps = 5/59 (8%)
Query: 60 ILEIGPGTG----NLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV 114
+L +G GTG + + G + + + + K+I+ +
Sbjct: 6 VLIVG-GTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 27.2 bits (60), Expect = 3.2
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 12/80 (15%)
Query: 70 LTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV------------LKT 117
+ + L++ G V+ + EL +S Y L + D+ +++
Sbjct: 26 VARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 85
Query: 118 DLPYFDICVANIPYQISSPL 137
DIC+ N L
Sbjct: 86 QHSGVDICINNAGLARPDTL 105
>d1ixra2 b.40.4.2 (A:1-62) DNA helicase RuvA subunit, N-terminal
domain {Thermus thermophilus [TaxId: 274]}
Length = 62
Score = 25.1 bits (55), Expect = 3.5
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 110 IQGDVLKTDLPYFDICVANIPYQISSPL-TFKLLFHQPAFRCAIIMFQKEFAMRL 163
++G VLK + F + + + + +P + L + KE + L
Sbjct: 5 LRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQALEEGKEVGVHTHLLLKEEGLSL 59
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Bacillus subtilis [TaxId: 1423]}
Length = 204
Score = 26.4 bits (57), Expect = 5.3
Identities = 8/50 (16%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 59 VILEIGPGTGNLTKKLLEA--GKMVIAVELDSRMVLELQRRFQSTPYSNR 106
+ +E+G G G + + I +EL +++ ++ + + N
Sbjct: 32 IHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNV 81
>d2f5ya1 b.36.1.1 (A:19-95) Regulator of G-protein signaling 3,
RGS3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 24.8 bits (54), Expect = 5.6
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 24 GAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIA 83
G G F + + ++AG++ D +L++ K +E + +
Sbjct: 6 GKDGFGFTICCDSPVRVQAVDSGGPAERAGLQQLDTVLQLN-ERPVEHWKCVELAHEIRS 64
Query: 84 VELDSRMVLELQR 96
S ++L + R
Sbjct: 65 CP--SEIILLVWR 75
>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase
domain {Thermotoga maritima [TaxId: 2336]}
Length = 192
Score = 25.9 bits (56), Expect = 5.9
Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 22/173 (12%)
Query: 37 HILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEA--GKMVIAVELDSRMVLEL 94
HI P++V +++ + +IL+ G G ++ +LE G +I +++DS ++
Sbjct: 7 HI---PVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIA 63
Query: 95 QRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPL-TFKLLFHQPAFRCAII 153
+ + + L + L I ++ L + +Q +
Sbjct: 64 EEKLKEFSDRVSLFKVSYREADFLLKTLGI------EKVDGILMDLGVSTYQLKGENREL 117
Query: 154 MFQKEF---AMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNN--FRPPPK 201
KEF A L+ G R+ V + + + +N+ R +
Sbjct: 118 ENLKEFLKKAEDLLNPGG-----RIVVISFHSLEDRIVKETFRNSKKLRILTE 165
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 339
Score = 26.2 bits (56), Expect = 6.6
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 16/102 (15%)
Query: 59 VILEIGPGTG----NLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV 114
+ L G TG LT+ LL G V + R S + R+ I D
Sbjct: 3 IALITG-ITGQDGSYLTEFLLGKGYEVHGLI-----------RRSSNFNTQRINHIYIDP 50
Query: 115 LKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQ 156
+ + A++ S ++ + A
Sbjct: 51 HNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHV 92
>d2i6va1 b.36.1.5 (A:219-305) General secretion pathway protein C,
EpsC {Vibrio cholerae [TaxId: 666]}
Length = 87
Score = 24.5 bits (53), Expect = 7.6
Identities = 2/18 (11%), Positives = 9/18 (50%)
Query: 47 SIVQKAGIKSTDVILEIG 64
+ + G++ D+ + +
Sbjct: 30 VLFESIGLQDGDMAVALN 47
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria
monocytogenes [TaxId: 1639]}
Length = 328
Score = 25.7 bits (55), Expect = 8.5
Identities = 17/137 (12%), Positives = 40/137 (29%), Gaps = 11/137 (8%)
Query: 5 KIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNP---LLVESIVQKAGIKSTDVIL 61
I E + Q G+ + + ++ + + K IL
Sbjct: 63 SIELENFSNEEIRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSIL 122
Query: 62 EIGPGTGNL-------TKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDV 114
+ GT NL + + V++D ++ L + Q +
Sbjct: 123 DPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLI-SLALVGADLQRQKMTLLHQDGL 181
Query: 115 LKTDLPYFDICVANIPY 131
+ D+ ++++P
Sbjct: 182 ANLLVDPVDVVISDLPV 198
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.136 0.387
Gapped
Lambda K H
0.267 0.0452 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,260,643
Number of extensions: 58493
Number of successful extensions: 212
Number of sequences better than 10.0: 1
Number of HSP's gapped: 200
Number of HSP's successfully gapped: 53
Length of query: 359
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 273
Effective length of database: 1,226,816
Effective search space: 334920768
Effective search space used: 334920768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.9 bits)