Citrus Sinensis ID: 018261

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS
cccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHcccEEEEEEcHHHHHHHHHHHccccccccCEEEEccccccccccccEEEEccccccccHHHHHHccccccccEEEEEEEHHHHHHHccccccccccHHHHHHHHHHccEEEEEEccccccccccccCEEEEEECccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHccccHHHHHHHHHHHHHcccccc
***************************ISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGV**********************VSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS
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MAGGKIRKEKGKQKSGPYQGQGLGAGGISFHKSKGQHILKNPLLVESIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKMVIAVELDSRMVLELQRRFQSTPYSNRLKVIQGDVLKTDLPYFDICVANIPYQISSPLTFKLLFHQPAFRCAIIMFQKEFAMRLVAQPGDKLYCRLSVNTQLHARVSHLLKVGKNNFRPPPKVDSSVVRIEPRKPRPQVNPVEWDGFLRICFIRKNKTLSSIFRLKNVLSMLEKNYRTLQALQSSQNSSLGNTEIGTDTPSLGDSNGDQSMGVDDGSDDEMDVEDDDGDSDVEGEVSEFKDKVLAVLREGQFEEKRASKLTQQEFLYLLSLFNKAGIHFS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable dimethyladenosine transferase Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA in the 40S particle.probableQ9UNQ2
Probable dimethyladenosine transferase Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA in the 40S particle.probableQ9D0D4
Probable dimethyladenosine transferase Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA in the 40S particle.probableQ2KHT8

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.1.-.-Transferring one-carbon groups.probable
2.1.1.-15-hydroxyprostaglandin-I dehydrogenase (NADP(+)).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2H1R, chain A
Confidence level:very confident
Coverage over the Query: 37-267,315-359
View the alignment between query and template
View the model in PyMOL