BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018263
(358 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 237 bits (604), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 187/319 (58%), Gaps = 17/319 (5%)
Query: 8 FSFPSRVSAENTIGGEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGT 67
F P+ E +G + FS +L++A++ F N +G GGFG VYKGRL DGT
Sbjct: 10 FDVPAEEDPEVHLG------QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGT 63
Query: 68 IVAVKVLSVESKQG-EKEFMSEVA--SMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 124
+VAVK L E QG E +F +EV SMA H NL++L G C+ R+LVY YM N
Sbjct: 64 LVAVKRLKEERXQGGELQFQTEVEMISMA----VHRNLLRLRGFCMTPTERLLVYPYMAN 119
Query: 125 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 184
S++ L + + W R+ I +G RGLAY+H+ P ++HRD+K +NILLD+ F
Sbjct: 120 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 179
Query: 185 NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
+ DFGL+KL H+ V GT+G++APEY +G+ + K+DV+ +GV+LLE+++G
Sbjct: 180 EAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 239
Query: 245 RTAVDFDVQLG---EYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQ 301
+ A D +L + L+D G+ K+L LVD L GN+ + E + ++V LLC Q
Sbjct: 240 QRAFDL-ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ 298
Query: 302 EKSKLRPQMSTAIKMMNGE 320
RP+MS ++M+ G+
Sbjct: 299 SSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 233 bits (593), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/319 (38%), Positives = 185/319 (57%), Gaps = 17/319 (5%)
Query: 8 FSFPSRVSAENTIGGEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGT 67
F P+ E +G + FS +L++A++ F N +G GGFG VYKGRL DG
Sbjct: 2 FDVPAEEDPEVHLG------QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGX 55
Query: 68 IVAVKVLSVESKQG-EKEFMSEVA--SMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 124
+VAVK L E QG E +F +EV SMA H NL++L G C+ R+LVY YM N
Sbjct: 56 LVAVKRLKEERTQGGELQFQTEVEMISMA----VHRNLLRLRGFCMTPTERLLVYPYMAN 111
Query: 125 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNF 184
S++ L + + W R+ I +G RGLAY+H+ P ++HRD+K +NILLD+ F
Sbjct: 112 GSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF 171
Query: 185 NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
+ DFGL+KL H+ V G +G++APEY +G+ + K+DV+ +GV+LLE+++G
Sbjct: 172 EAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 231
Query: 245 RTAVDFDVQLG---EYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQ 301
+ A D +L + L+D G+ K+L LVD L GN+ + E + ++V LLC Q
Sbjct: 232 QRAFDL-ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ 290
Query: 302 EKSKLRPQMSTAIKMMNGE 320
RP+MS ++M+ G+
Sbjct: 291 SSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 161/279 (57%), Gaps = 6/279 (2%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVN 96
L+ ATN F IG G FG VYKG L+DG VA+K + ES QG +EF +E+ +++
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 97 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H +LV L G C + IL+Y YM N +L + L G + W+ R EI +G RG
Sbjct: 94 --HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYL 215
L Y+H ++HRD+K+ NILLD+NF PKI+DFG+SK E + TH+ V GTLGY+
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PEY I GRLT KSDVYSFGV+L E++ R+A+ + +L + A +N+ +L +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 276 VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAI 314
VDP L +F + C+ S+ RP M +
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 187 bits (475), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/279 (41%), Positives = 160/279 (57%), Gaps = 6/279 (2%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVN 96
L+ ATN F IG G FG VYKG L+DG VA+K + ES QG +EF +E+ +++
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 97 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H +LV L G C + IL+Y YM N +L + L G + W+ R EI +G RG
Sbjct: 94 --HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYL 215
L Y+H ++HRD+K+ NILLD+NF PKI+DFG+SK E TH+ V GTLGY+
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PEY I GRLT KSDVYSFGV+L E++ R+A+ + +L + A +N+ +L +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 276 VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAI 314
VDP L +F + C+ S+ RP M +
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 140/232 (60%), Gaps = 19/232 (8%)
Query: 29 INAFSYNQLKIATNGFRWS------NKIGEGGFGSVYKGRLQDGTIVAVKVLS----VES 78
++FS+ +LK TN F NK+GEGGFG VYKG + + T VAVK L+ + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 70
Query: 79 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 138
++ +++F E+ MA HENLV+L G DG LVY YMPN SL L +
Sbjct: 71 EELKQQFDQEIKVMAKCQ--HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT- 127
Query: 139 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 198
W R +I G G+ ++HE H +HRDIK++NILLD+ F KISDFGL++
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 199 E-NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
+ T + +R+ GT Y+APE A+ G +T KSD+YSFGV+LLEI++G AVD
Sbjct: 185 KFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 139/232 (59%), Gaps = 19/232 (8%)
Query: 29 INAFSYNQLKIATNGFRWS------NKIGEGGFGSVYKGRLQDGTIVAVKVLS----VES 78
++FS+ +LK TN F NK+GEGGFG VYKG + + T VAVK L+ + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 70
Query: 79 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 138
++ +++F E+ MA HENLV+L G DG LVY YMPN SL L +
Sbjct: 71 EELKQQFDQEIKVMAKCQ--HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT- 127
Query: 139 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 198
W R +I G G+ ++HE H +HRDIK++NILLD+ F KISDFGL++
Sbjct: 128 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 199 E-NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
+ T + R+ GT Y+APE A+ G +T KSD+YSFGV+LLEI++G AVD
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 160 bits (405), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 138/232 (59%), Gaps = 19/232 (8%)
Query: 29 INAFSYNQLKIATNGFRWS------NKIGEGGFGSVYKGRLQDGTIVAVKVLS----VES 78
++FS+ +LK TN F NK+GEGGFG VYKG + + T VAVK L+ + +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 64
Query: 79 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 138
++ +++F E+ MA HENLV+L G DG LVY YMPN SL L +
Sbjct: 65 EELKQQFDQEIKVMAKCQ--HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT- 121
Query: 139 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 198
W R +I G G+ ++HE H +HRDIK++NILLD+ F KISDFGL++
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 199 ENTTHI-STRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
+ + R+ GT Y+APE A+ G +T KSD+YSFGV+LLEI++G AVD
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 135/232 (58%), Gaps = 19/232 (8%)
Query: 29 INAFSYNQLKIATNGFRWS------NKIGEGGFGSVYKGRLQDGTIVAVKVLS----VES 78
++FS+ +LK TN F NK GEGGFG VYKG + + T VAVK L+ + +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITT 61
Query: 79 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 138
++ +++F E+ A HENLV+L G DG LVY Y PN SL L +
Sbjct: 62 EELKQQFDQEIKVXAKCQ--HENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT- 118
Query: 139 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 198
W R +I G G+ ++HE H +HRDIK++NILLD+ F KISDFGL++
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 199 ENTTHI-STRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
+ + +R+ GT Y APE A+ G +T KSD+YSFGV+LLEI++G AVD
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 148/296 (50%), Gaps = 42/296 (14%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRL-QDGTIVAVKVLSVESKQGE-------KEFMSEVA 90
+A N + +IG+GGFG V+KGRL +D ++VA+K L + +GE +EF EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 91 SMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
M+N+N H N+VKL+ G + P R +V +++P L LL + W + ++
Sbjct: 76 IMSNLN--HPNIVKLY-GLMHNPPR-MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLM 128
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQN--FNPKISDFGLSKLFPENTTHIS 205
+ I G+ Y+ + P +VHRD+++ NI LD+N K++DFGLS + + H
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSV 183
Query: 206 TRVAGTLGYLAPEY--AISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKA 263
+ + G ++APE A T K+D YSF ++L I++G D EY
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------EYS----- 232
Query: 264 WGMYNSKELMNLV-DPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
Y + +N++ + L PE+ R V LC K RP S +K ++
Sbjct: 233 ---YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 147/296 (49%), Gaps = 42/296 (14%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRL-QDGTIVAVKVLSVESKQGE-------KEFMSEVA 90
+A N + +IG+GGFG V+KGRL +D ++VA+K L + +GE +EF EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 91 SMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
M+N+N H N+VKL+ G + P R +V +++P L LL + W + ++
Sbjct: 76 IMSNLN--HPNIVKLY-GLMHNPPR-MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLM 128
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQN--FNPKISDFGLSKLFPENTTHIS 205
+ I G+ Y+ + P +VHRD+++ NI LD+N K++DFG S + + H
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSV 183
Query: 206 TRVAGTLGYLAPEY--AISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKA 263
+ + G ++APE A T K+D YSF ++L I++G D EY
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------EYS----- 232
Query: 264 WGMYNSKELMNLV-DPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
Y + +N++ + L PE+ R V LC K RP S +K ++
Sbjct: 233 ---YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 147/296 (49%), Gaps = 42/296 (14%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRL-QDGTIVAVKVLSVESKQGE-------KEFMSEVA 90
+A N + +IG+GGFG V+KGRL +D ++VA+K L + +GE +EF EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 91 SMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
M+N+N H N+VKL+ G + P R +V +++P L LL + W + ++
Sbjct: 76 IMSNLN--HPNIVKLY-GLMHNPPR-MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLM 128
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQN--FNPKISDFGLSKLFPENTTHIS 205
+ I G+ Y+ + P +VHRD+++ NI LD+N K++DF LS + + H
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSV 183
Query: 206 TRVAGTLGYLAPEY--AISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKA 263
+ + G ++APE A T K+D YSF ++L I++G D EY
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD------EYS----- 232
Query: 264 WGMYNSKELMNLV-DPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
Y + +N++ + L PE+ R V LC K RP S +K ++
Sbjct: 233 ---YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 10/198 (5%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEK--EFMSEVASMANVNVCHENLVKLH 106
KIG G FG+V++ G+ VAVK+L + E+ EF+ EVA M + H N+V
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLR--HPNIVLFM 100
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G P +V +Y+ SL + LL + R + + R + + +G+ Y+H P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR-VAGTLGYLAPEYAISGRL 225
+VHR++K+ N+L+D+ + K+ DFGLS+L + +T +S++ AGT ++APE
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 226 TRKSDVYSFGVLLLEIVS 243
KSDVYSFGV+L E+ +
Sbjct: 217 NEKSDVYSFGVILWELAT 234
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 8/197 (4%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEK--EFMSEVASMANVNVCHENLVKLH 106
KIG G FG+V++ G+ VAVK+L + E+ EF+ EVA M + H N+V
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLR--HPNIVLFM 100
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G P +V +Y+ SL + LL + R + + R + + +G+ Y+H P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
+VHRD+K+ N+L+D+ + K+ DFGLS+L + S AGT ++APE
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 227 RKSDVYSFGVLLLEIVS 243
KSDVYSFGV+L E+ +
Sbjct: 218 EKSDVYSFGVILWELAT 234
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I R K+G+G FG V+ G T VA+K L + E F+ E M
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKK 59
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ HE LV+L+ + P I V +YM SL L GE + + ++ I
Sbjct: 60 LR--HEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIA 114
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N + +
Sbjct: 115 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 171
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 9/216 (4%)
Query: 28 NINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMS 87
+ + +I R K+G+G FG V+ G T VA+K L + E F+
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQ 62
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E M + HE LV+L+ + P I++ +YM SL L GE + +
Sbjct: 63 EAQVMKKLR--HEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRL--PQLV 117
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
++ I G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 174
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 9/216 (4%)
Query: 28 NINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMS 87
+ + +I R K+G+G FG V+ G T VA+K L + E F+
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQ 62
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E M + HE LV+L+ + P I V +YM SL L GE + +
Sbjct: 63 EAQVMKKIR--HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLV 117
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
++ I G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I R K+G+G FG V+ G T VA+K L + E F+ E M
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKK 62
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ HE LV+L+ + P I V +YM SL L GE + + ++ I
Sbjct: 63 LR--HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIA 117
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N + +
Sbjct: 118 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 174
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 9/216 (4%)
Query: 28 NINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMS 87
+ + +I R K+G+G FG V+ G T VA+K L + E F+
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQ 62
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E M + HE LV+L+ + P I++ +YM SL L GE + +
Sbjct: 63 EAQVMKKLR--HEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRL--PQLV 117
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
++ I G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I R K+G+G FG V+ G T VA+K L + E F+ E M
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKK 60
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ HE LV+L+ + P I V +YM SL L GE + + ++ I
Sbjct: 61 LR--HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIA 115
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N + +
Sbjct: 116 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 172
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 9/206 (4%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNV 97
+I R K+G+G FG V+ G T VA+K L + E F+ E M +
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLR- 60
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
HE LV+L+ + P I V +YM SL L GE + + ++ I G+
Sbjct: 61 -HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGM 116
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N + + AP
Sbjct: 117 AYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 173
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVS 243
E A+ GR T KSDV+SFG+LL E+ +
Sbjct: 174 EAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 9/216 (4%)
Query: 28 NINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMS 87
+ + +I R K+G+G FG V+ G T VA+K L + E F+
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQ 62
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E M + HE LV+L+ + P I V +YM SL L GE + +
Sbjct: 63 EAQVMKKLR--HEKLVQLYAVVSEEPIYI-VCEYMSKGSLLDFLKGEMGKYLRL--PQLV 117
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
++ I G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 9/216 (4%)
Query: 28 NINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMS 87
+ + +I R K+G+G FG V+ G T VA+K L + E F+
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQ 62
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E M + HE LV+L+ + P I V +YM SL L GE + +
Sbjct: 63 EAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLV 117
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
++ I G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I R K+G+G FG V+ G T VA+K L + E F+ E M
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKK 235
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ HE LV+L+ + P I V +YM SL L GE + + ++ I
Sbjct: 236 LR--HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIA 290
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N + +
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I R K+G+G FG V+ G T VA+K L + E F+ E M
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKK 235
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ HE LV+L+ + P I V +YM SL L GE + + ++ I
Sbjct: 236 LR--HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIA 290
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N + +
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 9/216 (4%)
Query: 28 NINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMS 87
+ + +I R K+G+G FG V+ G T VA+K L + E F+
Sbjct: 1 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQ 59
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E M + HE LV+L+ + P I V +YM SL L GE + +
Sbjct: 60 EAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRL--PQLV 114
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
++ I G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N
Sbjct: 115 DMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQG 171
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 172 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I R K+G+G FG V+ G T VA+K L + E F+ E M
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKK 66
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ HE LV+L+ + P I V +YM SL L GE + + ++ I
Sbjct: 67 LR--HEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRL--PQLVDMSAQIA 121
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N + +
Sbjct: 122 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 178
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I R K+G+G FG V+ G T VA+K L + E F+ E M
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKK 235
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ HE LV+L+ + P I V +YM SL L GE + + ++ I
Sbjct: 236 LR--HEKLVQLYAVVSEEPIYI-VGEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIA 290
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N + +
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 28 NINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMS 87
+ + +I R K+G+G FG V+ G T VA+K L + E F+
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQ 62
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E M + HE LV+L+ + P I V +YM SL L GE + +
Sbjct: 63 EAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLV 117
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
++ I G+AY+ + + VHRD+ +NIL+ +N K++DFGL++L +N
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 28 NINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMS 87
+ + +I R K+G+G FG V+ G T VA+K L + E F+
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQ 62
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E M + HE LV+L+ + P I V +YM L L GE + +
Sbjct: 63 EAQVMKKLR--HEKLVQLYAVVSEEPIYI-VMEYMSKGCLLDFLKGEMGKYLRL--PQLV 117
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
++ I G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I R K+G+G FG V+ G T VA+K L + E F+ E M
Sbjct: 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKK 318
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ HE LV+L+ + P I V +YM SL L GE + + ++ I
Sbjct: 319 LR--HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIA 373
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N + +
Sbjct: 374 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 430
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 28 NINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMS 87
+ + +I R K+G+G FG V+ G T VA+K L + E F+
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQ 62
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E M + HE LV+L+ + P I V +YM L L GE + +
Sbjct: 63 EAQVMKKLR--HEKLVQLYAVVSEEPIYI-VTEYMSKGCLLDFLKGEMGKYLRL--PQLV 117
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
++ I G+AY+ + + VHRD++ +NIL+ +N K++DFGL++L +N
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I R K+G+G FG V+ G T VA+K L + E F+ E M
Sbjct: 178 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKK 236
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ HE LV+L+ + P I V +YM SL L GE + + ++ I
Sbjct: 237 LR--HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIA 291
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+AY+ + + VHRD++ +NIL+ +N K++DFGL +L +N + +
Sbjct: 292 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW 348
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE A+ GR T KSDV+SFG+LL E+ +
Sbjct: 349 TAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 49 KIGEGGFGSVYKGRL------QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENL 102
++GEG FG V+ QD +VAVK L S K+F E + N+ HE++
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ--HEHI 77
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQ---------TLLGEEKRRAKFGWKARREIIMGI 153
VK +G C++G I+V++YM + L++ L+ E + I I
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTL 212
G+ Y+ + H VHRD+ T N L+ +N KI DFG+S+ ++ + + +
Sbjct: 138 AAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 213 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
++ PE + + T +SDV+S GV+L EI +
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 48 NKIGEGGFGSVYKGRL------QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHEN 101
++GEG FG V+ +D +VAVK L + K+F E + N+ HE+
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ--HEH 78
Query: 102 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGE----------EKRRAK--FGWKARREI 149
+VK +G C DG I+V++YM + L++ L + R+AK G I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 150 IMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRV 208
I G+ Y+ + H VHRD+ T N L+ N KI DFG+S+ ++ + +
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 209 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ ++ PE + + T +SDV+SFGV+L EI +
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 133/298 (44%), Gaps = 46/298 (15%)
Query: 22 GEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQG 81
G Q K + ++ ++ + ++G G FG V+ G T VAVK L KQG
Sbjct: 1 GSQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQG 56
Query: 82 EKEFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKR 137
MS A +A N+ H+ LV+L+ P I+ +YM N SL L +
Sbjct: 57 S---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPS 110
Query: 138 RAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF 197
K ++ I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L
Sbjct: 111 GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI 167
Query: 198 PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGE 256
+N + + APE G T KSDV+SFG+LL EIV+ GR
Sbjct: 168 EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP------- 220
Query: 257 YHLVDKAWGMYNSKELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
GM N + + NL V P N PE ++ LC +E+ + RP
Sbjct: 221 --------GMTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 263
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+IG G FG V+ G + VA+K + E E++F+ E M ++ H LV+L+G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLVQLYG 69
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
C++ LV+++M + LS L +R F + + + + G+AY+ E
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 123
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
V+HRD+ N L+ +N K+SDFG+++ ++ ST + + +PE R +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 228 KSDVYSFGVLLLEIVS 243
KSDV+SFGVL+ E+ S
Sbjct: 184 KSDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+IG G FG V+ G + VA+K + E E++F+ E M ++ H LV+L+G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLVQLYG 67
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
C++ LV+++M + LS L +R F + + + + G+AY+ E
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 121
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
V+HRD+ N L+ +N K+SDFG+++ ++ ST + + +PE R +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 228 KSDVYSFGVLLLEIVS 243
KSDV+SFGVL+ E+ S
Sbjct: 182 KSDVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+IG G FG V+ G + VA+K + E E++F+ E M ++ H LV+L+G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLVQLYG 72
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
C++ LV+++M + LS L +R F + + + + G+AY+ E
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 126
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
V+HRD+ N L+ +N K+SDFG+++ ++ ST + + +PE R +
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 228 KSDVYSFGVLLLEIVS 243
KSDV+SFGVL+ E+ S
Sbjct: 187 KSDVWSFGVLMWEVFS 202
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+IG G FG V+ G + VA+K + E E++F+ E M ++ H LV+L+G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLVQLYG 69
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
C++ LV+++M + LS L +R F + + + + G+AY+ E
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEE---AS 123
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
V+HRD+ N L+ +N K+SDFG+++ ++ ST + + +PE R +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 228 KSDVYSFGVLLLEIVS 243
KSDV+SFGVL+ E+ S
Sbjct: 184 KSDVWSFGVLMWEVFS 199
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+IG G FG V+ G + VA+K + E E +F+ E M ++ H LV+L+G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLS--HPKLVQLYG 89
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
C++ LV+++M + LS L +R F + + + + G+AY+ E
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 143
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
V+HRD+ N L+ +N K+SDFG+++ ++ ST + + +PE R +
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 203
Query: 228 KSDVYSFGVLLLEIVS 243
KSDV+SFGVL+ E+ S
Sbjct: 204 KSDVWSFGVLMWEVFS 219
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 26/261 (9%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG 108
++G G FG V+ G T VA+K L + E F+ E M + H+ LV+L+
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLK--HDKLVQLYAV 72
Query: 109 CIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 168
+ P I V +YM SL L E R K ++ + G+AYI + +
Sbjct: 73 VSEEPIYI-VTEYMNKGSLLDFLKDGEGRALKL--PNLVDMAAQVAAGMAYIE---RMNY 126
Query: 169 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRK 228
+HRD++++NIL+ KI+DFGL++L +N + + APE A+ GR T K
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 229 SDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYGNFPEN 287
SDV+SFG+LL E+V+ GR GM N++E++ V+ P++
Sbjct: 187 SDVWSFGILLTELVTKGRVPYP---------------GM-NNREVLEQVERGYRMPCPQD 230
Query: 288 EAIRFLKVGLLCVQEKSKLRP 308
I ++ + C ++ + RP
Sbjct: 231 CPISLHELMIHCWKKDPEERP 251
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 24 QILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEK 83
Q K + ++ ++ + ++G G FG V+ G T VAVK L KQG
Sbjct: 1 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS- 55
Query: 84 EFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRA 139
MS A +A N+ H+ LV+L+ P I+ +YM N SL L +
Sbjct: 56 --MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGI 110
Query: 140 KFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE 199
K ++ I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +
Sbjct: 111 KLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 167
Query: 200 NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYH 258
N + + APE G T KSDV+SFG+LL EIV+ GR
Sbjct: 168 NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP--------- 218
Query: 259 LVDKAWGMYNSKELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
GM N + + NL V P N PE ++ LC +E+ + RP
Sbjct: 219 ------GMTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
++ ++ + ++G G FG V+ G T VAVK L KQG MS A +A
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS---MSPDAFLAE 60
Query: 95 VNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
N+ H+ LV+L+ P I+ +YM N SL L + K ++
Sbjct: 61 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMA 117
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +N
Sbjct: 118 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 174
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNS 269
+ + APE G T KSDV+SFG+LL EIV+ GR GM N
Sbjct: 175 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP---------------GMTNP 219
Query: 270 KELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+ + NL V P N PE ++ LC +E+ + RP
Sbjct: 220 EVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 257
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 24 QILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEK 83
Q K + ++ ++ + ++G G FG V+ G T VAVK L KQG
Sbjct: 5 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS- 59
Query: 84 EFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRA 139
MS A +A N+ H+ LV+L+ P I+ +YM N SL L +
Sbjct: 60 --MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGI 114
Query: 140 KFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE 199
K ++ I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +
Sbjct: 115 KLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 171
Query: 200 NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYH 258
N + + APE G T KSDV+SFG+LL EIV+ GR
Sbjct: 172 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP--------- 222
Query: 259 LVDKAWGMYNSKELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
GM N + + NL V P N PE ++ LC +E+ + RP
Sbjct: 223 ------GMTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 265
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
++ ++ + ++G G FG V+ G T VAVK L KQG MS A +A
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS---MSPDAFLAE 67
Query: 95 VNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
N+ H+ LV+L+ P I+ +YM N SL L + K ++
Sbjct: 68 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMA 124
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +N
Sbjct: 125 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 181
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNS 269
+ + APE G T KSDV+SFG+LL EIV+ GR GM N
Sbjct: 182 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP---------------GMTNP 226
Query: 270 KELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+ + NL V P N PE ++ LC +E+ + RP
Sbjct: 227 EVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 264
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
++ ++ + ++G G FG V+ G T VAVK L KQG MS A +A
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS---MSPDAFLAE 58
Query: 95 VNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
N+ H+ LV+L+ P I+ +YM N SL L + K ++
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMA 115
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +N
Sbjct: 116 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 172
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNS 269
+ + APE G T KSDV+SFG+LL EIV+ GR GM N
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP---------------GMTNP 217
Query: 270 KELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+ + NL V P N PE ++ LC +E+ + RP
Sbjct: 218 EVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 255
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
++ ++ + ++G G FG V+ G T VAVK L KQG MS A +A
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS---MSPDAFLAE 58
Query: 95 VNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
N+ H+ LV+L+ P I+ +YM N SL L + K ++
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMA 115
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +N
Sbjct: 116 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 172
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNS 269
+ + APE G T KSDV+SFG+LL EIV+ GR GM N
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP---------------GMTNP 217
Query: 270 KELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+ + NL V P N PE ++ LC +E+ + RP
Sbjct: 218 EVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 255
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 24 QILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEK 83
Q K + ++ ++ + ++G G FG V+ G T VAVK L KQG
Sbjct: 1 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS- 55
Query: 84 EFMSEVASMANVNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRA 139
MS A +A N+ H+ LV+L+ P I+ +YM N SL L +
Sbjct: 56 --MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGI 110
Query: 140 KFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE 199
K ++ I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +
Sbjct: 111 KLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 167
Query: 200 NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYH 258
N + + APE G T KSDV+SFG+LL EIV+ GR
Sbjct: 168 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP--------- 218
Query: 259 LVDKAWGMYNSKELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
GM N + + NL V P N PE ++ LC +E+ + RP
Sbjct: 219 ------GMTNPEVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 261
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
++ ++ + ++G G FG V+ G T VAVK L KQG MS A +A
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS---MSPDAFLAE 59
Query: 95 VNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
N+ H+ LV+L+ P I+ +YM N SL L + K ++
Sbjct: 60 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMA 116
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +N
Sbjct: 117 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF 173
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNS 269
+ + APE G T KSDV+SFG+LL EIV+ GR GM N
Sbjct: 174 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP---------------GMTNP 218
Query: 270 KELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+ + NL V P N PE ++ LC +E+ + RP
Sbjct: 219 EVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 256
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
++ ++ + ++G G FG V+ G T VAVK L KQG MS A +A
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS---MSPDAFLAE 63
Query: 95 VNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
N+ H+ LV+L+ P I+ +YM N SL L + K ++
Sbjct: 64 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMA 120
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +N
Sbjct: 121 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 177
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNS 269
+ + APE G T KSDV+SFG+LL EIV+ GR GM N
Sbjct: 178 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP---------------GMTNP 222
Query: 270 KELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+ + NL V P N PE ++ LC +E+ + RP
Sbjct: 223 EVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 260
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
++ ++ + ++G G FG V+ G T VAVK L KQG MS A +A
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS---MSPDAFLAE 53
Query: 95 VNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
N+ H+ LV+L+ P I+ +YM N SL L + K ++
Sbjct: 54 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMA 110
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +N
Sbjct: 111 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 167
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNS 269
+ + APE G T KSDV+SFG+LL EIV+ GR GM N
Sbjct: 168 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP---------------GMTNP 212
Query: 270 KELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+ + NL V P N PE ++ LC +E+ + RP
Sbjct: 213 EVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 250
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 129/285 (45%), Gaps = 46/285 (16%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
++ ++ + ++G G FG V+ G T VAVK L KQG MS A +A
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS---MSPDAFLAE 58
Query: 95 VNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
N+ H+ LV+L+ P I+ +YM N SL L + K ++
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMA 115
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I G+A+I E + +HRD++ +NIL+ + KI+DFGL++L +N
Sbjct: 116 AQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF 172
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNS 269
+ + APE G T KSDV+SFG+LL EIV+ GR GM N
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP---------------GMTNP 217
Query: 270 KELMNL------VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+ + NL V P N PE ++ LC +E+ + RP
Sbjct: 218 EVIQNLERGYRMVRP---DNCPEE----LYQLMRLCWKERPEDRP 255
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+IG G FG V+ G + VA+K + E E++F+ E M ++ H LV+L+G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLVQLYG 70
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
C++ LV ++M + LS L +R F + + + + G+AY+ E
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 124
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
V+HRD+ N L+ +N K+SDFG+++ ++ ST + + +PE R +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 228 KSDVYSFGVLLLEIVS 243
KSDV+SFGVL+ E+ S
Sbjct: 185 KSDVWSFGVLMWEVFS 200
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I + K+G G FG V+ T VAVK + S E F++E M
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKT 66
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ H+ LVKLH P I+ ++M SL L +E + + I
Sbjct: 67 LQ--HDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIA 121
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+A+I Q + +HRD++ +NIL+ + KI+DFGL+++ +N + +
Sbjct: 122 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 178
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE G T KSDV+SFG+LL+EIV+
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I + K+G G FG V+ T VAVK + S E F++E M
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKT 239
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ H+ LVKLH P I+ ++M SL L +E + + I
Sbjct: 240 LQ--HDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIA 294
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+A+I Q + +HRD++ +NIL+ + KI+DFGL+++ +N + +
Sbjct: 295 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 351
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE G T KSDV+SFG+LL+EIV+
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC--HENLVKLHG 107
IG GGFG VY+ G VAVK + + + + V A + H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEE-KRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
C+ P LV ++ L++ L G+ W + I RG+ Y+H+E
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAIV 127
Query: 167 HVVHRDIKTSNILLDQ--------NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPE 218
++HRD+K+SNIL+ Q N KI+DFGL++ + TT +S AG ++APE
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-HRTTKMSA--AGAYAWMAPE 184
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSGRT 246
+ ++ SDV+S+GVLL E+++G
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEV 212
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 124/271 (45%), Gaps = 46/271 (16%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVK 104
++G G FG V+ G T VAVK L KQG MS A +A N+ H+ LV+
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVR 68
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L+ P I+ +YM N SL L + K ++ I G+A+I E
Sbjct: 69 LYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER- 124
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+ +HR+++ +NIL+ + KI+DFGL++L +N + + APE G
Sbjct: 125 --NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 182
Query: 225 LTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL------VD 277
T KSDV+SFG+LL EIV+ GR GM N + + NL V
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYP---------------GMTNPEVIQNLERGYRMVR 227
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
P N PE ++ LC +E+ + RP
Sbjct: 228 P---DNCPEE----LYQLMRLCWKERPEDRP 251
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 27/270 (10%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
+G G FG V K + + VA+K +ES+ K F+ E+ ++ VN H N+VKL+G C
Sbjct: 16 VGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVN--HPNIVKLYGAC 70
Query: 110 IDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVV 169
++ C LV +Y SL L G E A + +G+AY+H ++
Sbjct: 71 LNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAM-SWCLQCSQGVAYLHSMQPKALI 127
Query: 170 HRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRK 228
HRD+K N+LL KI DFG + + TH+ T G+ ++APE + K
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNYSEK 183
Query: 229 SDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENE 288
DV+S+G++L E+++ R D ++ + ++ W ++N P L N P +
Sbjct: 184 CDVFSWGIILWEVITRRKPFD-EIGGPAFRIM---WAVHNGTR------PPLIKNLP--K 231
Query: 289 AIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
I L C + RP M +K+M
Sbjct: 232 PIESLMTR--CWSKDPSQRPSMEEIVKIMT 259
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 27/270 (10%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
+G G FG V K + + VA+K +ES+ K F+ E+ ++ VN H N+VKL+G C
Sbjct: 17 VGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVN--HPNIVKLYGAC 71
Query: 110 IDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVV 169
++ C LV +Y SL L G E A + +G+AY+H ++
Sbjct: 72 LNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAM-SWCLQCSQGVAYLHSMQPKALI 128
Query: 170 HRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRK 228
HRD+K N+LL KI DFG + + TH+ T G+ ++APE + K
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNYSEK 184
Query: 229 SDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENE 288
DV+S+G++L E+++ R D ++ + ++ W ++N P L N P +
Sbjct: 185 CDVFSWGIILWEVITRRKPFD-EIGGPAFRIM---WAVHNGTR------PPLIKNLP--K 232
Query: 289 AIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
I L C + RP M +K+M
Sbjct: 233 PIESLMT--RCWSKDPSQRPSMEEIVKIMT 260
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 17/220 (7%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMS 87
S+N + ++ ++G+G FGSV R LQD G +VAVK L +++ ++F
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 78
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKA 145
E+ + ++ H+N+VK G C R L+ +Y+P SL L +K + +
Sbjct: 79 EIEILKSLQ--HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIK 133
Query: 146 RREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS 205
+ I +G+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++
Sbjct: 134 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 206 TRVAG--TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ G + + APE + + SDV+SFGV+L E+ +
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 17/220 (7%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMS 87
S+N + ++ ++G+G FGSV R LQD G +VAVK L +++ ++F
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 78
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKA 145
E+ + ++ H+N+VK G C R L+ +Y+P SL L +K + +
Sbjct: 79 EIEILKSLQ--HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIK 133
Query: 146 RREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS 205
+ I +G+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++
Sbjct: 134 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 206 TRVAG--TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ G + + APE + + SDV+SFGV+L E+ +
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 28/241 (11%)
Query: 24 QILKNINAFS---YNQLKIATNGFRWSNKIGEGGFGSVYKGRL------QDGTIVAVKVL 74
I++N FS + +K +W ++GEG FG V+ QD +VAVK L
Sbjct: 22 HIIENPQYFSDACVHHIKRRDIVLKW--ELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL 79
Query: 75 SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLL-- 132
S+ ++F E + + H+++V+ G C +G ++V++YM + L++ L
Sbjct: 80 KEASESARQDFQREAELLTMLQ--HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH 137
Query: 133 ---------GEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 183
GE+ G + + G+ Y+ H VHRD+ T N L+ Q
Sbjct: 138 GPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQG 194
Query: 184 FNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 242
KI DFG+S+ ++ + + R + ++ PE + + T +SDV+SFGV+L EI
Sbjct: 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
Query: 243 S 243
+
Sbjct: 255 T 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 44 FRWSNKIGEGGFGSVYKGRL------QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNV 97
+W ++GEG FG V+ QD +VAVK L S+ ++F E + +
Sbjct: 22 LKW--ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ- 78
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLL-----------GEEKRRAKFGWKAR 146
H+++V+ G C +G ++V++YM + L++ L GE+ G
Sbjct: 79 -HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHIS 205
+ + G+ Y+ H VHRD+ T N L+ Q KI DFG+S+ ++ + +
Sbjct: 138 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 206 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
R + ++ PE + + T +SDV+SFGV+L EI +
Sbjct: 195 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 44 FRWSNKIGEGGFGSVYKGRL------QDGTIVAVKVLSVESKQGEKEFMSEVASMANVNV 97
+W ++GEG FG V+ QD +VAVK L S+ ++F E + +
Sbjct: 16 LKW--ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ- 72
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLL-----------GEEKRRAKFGWKAR 146
H+++V+ G C +G ++V++YM + L++ L GE+ G
Sbjct: 73 -HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHIS 205
+ + G+ Y+ H VHRD+ T N L+ Q KI DFG+S+ ++ + +
Sbjct: 132 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 206 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
R + ++ PE + + T +SDV+SFGV+L EI +
Sbjct: 189 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V GRL+ VA+K L + + ++F+SE + M + H N++
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD--HPNIIH 94
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G +++ +YM N SL L K +F ++ GIG G+ Y+ +
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM- 150
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFG+S++ ++ T G + + APE
Sbjct: 151 --SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G+++ E++S GE W M N ++++ ++
Sbjct: 209 RKFTSASDVWSYGIVMWEVMS----------YGERPY----WDMSN-QDVIKAIEEGYRL 253
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + I ++ L C Q++ RP+ + M++
Sbjct: 254 PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 110
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L K A+F ++ GI G+ Y+ +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 166
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 167 --GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS----------YGER----PYWEMSN-QDVIKAVDEGYRL 269
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 81
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L K A+F ++ GI G+ Y+ +
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 137
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 138 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 196 RKFTSASDVWSYGIVLWEVMS----------YGERPY----WEMSN-QDVIKAVDEGYRL 240
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 241 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 98
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L K A+F ++ GI G+ Y+ +
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 154
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 155 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 212
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 213 RKFTSASDVWSYGIVLWEVMS----------YGERPY----WEMSN-QDVIKAVDEGYRL 257
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 258 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 10/242 (4%)
Query: 27 KNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEF 85
+N+ S ++ ++ +K+G G +G VY G + ++ VAVK L ++ + E EF
Sbjct: 17 ENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EF 75
Query: 86 MSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA 145
+ E A M + H NLV+L G C P +V +YMP +L L E R +
Sbjct: 76 LKEAAVMKEIK--HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVV 131
Query: 146 RREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS 205
+ I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 132 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAH 188
Query: 206 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAW 264
+ + APE + KSDV++FGVLL EI + + + L + Y L++K +
Sbjct: 189 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGY 248
Query: 265 GM 266
M
Sbjct: 249 RM 250
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 110
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L K A+F ++ GI G+ Y+ +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 166
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 167 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS----------YGER----PYWEMSN-QDVIKAVDEGYRL 269
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 110
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L K A+F ++ GI G+ Y+ +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 166
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 167 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS----------YGER----PYWEMSN-QDVIKAVDEGYRL 269
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 110
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L K A+F ++ GI G+ Y+ +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 166
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 167 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS----------YGER----PYWEMSN-QDVIKAVDEGYRL 269
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 110
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L K A+F ++ GI G+ Y+ +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 166
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 167 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS----------YGER----PYWEMSN-QDVIKAVDEGYRL 269
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 108
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L K A+F ++ GI G+ Y+ +
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 164
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 165 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 222
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 223 RKFTSASDVWSYGIVLWEVMS----------YGER----PYWEMSN-QDVIKAVDEGYRL 267
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 268 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 69
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 126
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 127 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V GRL+ VA+K L + + ++F+SE + M + H N++
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD--HPNIIH 79
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G +++ +YM N SL L K +F ++ GIG G+ Y+ +
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM- 135
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFG+S++ ++ T G + + APE
Sbjct: 136 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G+++ E++S GE W M N ++++ ++
Sbjct: 194 RKFTSASDVWSYGIVMWEVMS----------YGERPY----WDMSN-QDVIKAIEEGYRL 238
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + I ++ L C Q++ RP+ + M++
Sbjct: 239 PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 64 MKEIK--HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 119
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 120 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 232
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V GRL+ VA+K L + + ++F+SE + M + H N++
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD--HPNIIH 73
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G +++ +YM N SL L K +F ++ GIG G+ Y+ +
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM- 129
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFG+S++ ++ T G + + APE
Sbjct: 130 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G+++ E++S GE W M N ++++ ++
Sbjct: 188 RKFTSASDVWSYGIVMWEVMS----------YGERPY----WDMSN-QDVIKAIEEGYRL 232
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + I ++ L C Q++ RP+ + M++
Sbjct: 233 PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 100
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 157
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 158 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 68 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 123
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 136/308 (44%), Gaps = 54/308 (17%)
Query: 42 NGFRWSNKIGEGGFGSVYKGR------LQDGTIVAVKVLSVE-SKQGEKEFMSEVASMAN 94
N + IGEG FG V++ R + T+VAVK+L E S + +F E A MA
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYM-------------PNN--SLSQTLLGEEKRRA 139
+ + N+VKL G C G L+++YM P+ SLS + L R +
Sbjct: 107 FD--NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 140 KFG-----WKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS 194
G + I + G+AY+ E VHRD+ T N L+ +N KI+DFGLS
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLS 221
Query: 195 K-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQ 253
+ ++ + A + ++ PE R T +SDV+++GV+L EI F
Sbjct: 222 RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI--------FSYG 273
Query: 254 LGEYHLVDKAWGMYNSKELMNLVDPMLYGNF---PENEAIRFLKVGLLCVQEKSKLRPQM 310
L Y+ GM + + + + D GN PEN + + LC + RP
Sbjct: 274 LQPYY------GMAHEEVIYYVRD----GNILACPENCPLELYNLMRLCWSKLPADRPSF 323
Query: 311 STAIKMMN 318
+ +++
Sbjct: 324 CSIHRILQ 331
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 68
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 125
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 126 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 64 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 119
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 120 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 176
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 232
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 69
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 126
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 127 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 67
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 124
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 125 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 72
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 129
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 130 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 63 MKEIK--HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMAT 118
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 74
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 131
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 132 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 75
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 132
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 133 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 69
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 126
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 127 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 73
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 130
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 131 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 63 MKEIK--HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMAT 118
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 68 MKEIK--HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 123
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 65 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 120
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 68 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMAT 123
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 110
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L K A+F ++ GI G+ Y+ +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 166
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGL+++ ++ T G + + +PE
Sbjct: 167 --GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS----------YGER----PYWEMSN-QDVIKAVDEGYRL 269
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 76
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 133
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 134 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 68 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 123
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 63 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMAT 118
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 63 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 118
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 63 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMAT 118
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 63 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 118
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 66
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 67 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 122
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 123 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 235
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 65 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 120
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 68 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 123
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 75
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 76 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 131
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 132 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 188
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 244
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 122/271 (45%), Gaps = 46/271 (16%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLVK 104
++G G G V+ G T VAVK L KQG MS A +A N+ H+ LV+
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSL----KQGS---MSPDAFLAEANLMKQLQHQRLVR 72
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L+ P I+ +YM N SL L + K ++ I G+A+I E
Sbjct: 73 LYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER- 128
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+ +HRD++ +NIL+ + KI+DFGL++L + + + APE G
Sbjct: 129 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT 186
Query: 225 LTRKSDVYSFGVLLLEIVS-GRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL------VD 277
T KSDV+SFG+LL EIV+ GR GM N + + NL V
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYP---------------GMTNPEVIQNLERGYRMVR 231
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
P N PE ++ LC +E+ + RP
Sbjct: 232 P---DNCPEE----LYQLMRLCWKERPEDRP 255
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 65 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 120
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HRD+ N L+ +N K++DFGLS+L +T
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 9/197 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+K+G G FG VY+G + ++ VAVK L ++ + E EF+ E A M + H NLV+L
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLL 73
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G C P ++ ++M +L L E R + + I + Y+ ++
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK--- 128
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
+ +HRD+ N L+ +N K++DFGLS+L +T + + APE + +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 227 RKSDVYSFGVLLLEIVS 243
KSDV++FGVLL EI +
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V GRL+ VA+K L V +++ ++F+ E + M + H N++
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIH 87
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L +K +F ++ GI G+ Y+ +
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGISAGMKYLSDM- 143
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + APE
Sbjct: 144 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G+++ E+VS GE W M N ++++ V+
Sbjct: 202 RKFTSASDVWSYGIVMWEVVS----------YGE----RPYWEMTN-QDVIKAVEEGYRL 246
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q++ RP+ + M++
Sbjct: 247 PSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 15/201 (7%)
Query: 50 IGEGGFGSVYKGRL----QDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G G V GRL Q VA+K L +++ ++F+SE + M + H N+++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD--HPNIIR 114
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G G ++V +YM N SL L + +F ++ G+G G+ Y+ +
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLSDL- 170
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ N+L+D N K+SDFGLS++ ++ T G + + APE
Sbjct: 171 --GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAF 228
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
+ SDV+SFGV++ E+++
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA 249
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 70
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +K + + + I +G
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKG 127
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HR++ T NIL++ KI DFGL+K+ P++ + + G + +
Sbjct: 128 MEYLGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 72
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +++P SL + L +K + + + I +G
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKG 129
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 130 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 110
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V +YM N SL L K A+F ++ GI G+ Y+ +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 166
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGL ++ ++ T G + + +PE
Sbjct: 167 --GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS----------YGER----PYWEMSN-QDVIKAVDEGYRL 269
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 15/201 (7%)
Query: 50 IGEGGFGSVYKGRL----QDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G G V GRL Q VA+K L +++ ++F+SE + M + H N+++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD--HPNIIR 114
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G G ++V +YM N SL L + +F ++ G+G G+ Y+ +
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---GQFTIMQLVGMLRGVGAGMRYLSDL- 170
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ N+L+D N K+SDFGLS++ ++ T G + + APE
Sbjct: 171 --GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF 228
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
+ SDV+SFGV++ E+++
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA 249
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFD--HPNVVH 108
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G G ++V ++M N +L L K +F ++ GI G+ Y+ +
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFL---RKHDGQFTVIQLVGMLRGIAAGMRYLADM- 164
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ + T G + + APE
Sbjct: 165 --GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
+ T SDV+S+G+++ E++S
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I + ++G G FG V+ G + T VAVK L + F+ E M
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKT 64
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ H+ LV+L+ ++ +YM SL L +E + + I
Sbjct: 65 LQ--HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIA 120
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
G+AYI + + +HRD++ +N+L+ ++ KI+DFGL+++ +N + +
Sbjct: 121 EGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW 177
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS-------GRTAVDFDVQLGE 256
APE G T KSDV+SFG+LL EIV+ GRT D L +
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 9/197 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A M + H NLV+L
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLL 73
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G C P ++ ++M +L L E R + + I + Y+ ++
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK--- 128
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
+ +HRD+ N L+ +N K++DFGLS+L +T + + APE + +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 227 RKSDVYSFGVLLLEIVS 243
KSDV++FGVLL EI +
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 110
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V + M N SL L K A+F ++ GI G+ Y+ +
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 166
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 167 --GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS----------YGER----PYWEMSN-QDVIKAVDEGYRL 269
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 34 YNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMA 93
Y +I + ++G G FG V G+ + VA+K++ E E EF+ E M
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMM 74
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N++ HE LV+L+G C ++ +YM N L L + R +F + E+ +
Sbjct: 75 NLS--HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDV 129
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--LFPENTTHISTRVAGT 211
+ Y+ + +HRD+ N L++ K+SDFGLS+ L E T+ + ++
Sbjct: 130 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFP-- 184
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + PE + + + KSD+++FGVL+ EI S
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 34 YNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMA 93
Y +I + ++G G FG V G+ + VA+K++ E E EF+ E M
Sbjct: 7 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMM 65
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N++ HE LV+L+G C ++ +YM N L L + R +F + E+ +
Sbjct: 66 NLS--HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDV 120
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
+ Y+ + +HRD+ N L++ K+SDFGLS+ ++ S +
Sbjct: 121 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 177
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ PE + + + KSD+++FGVL+ EI S
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 81
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V + M N SL L K A+F ++ GI G+ Y+ +
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 137
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 138 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 195
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 196 RKFTSASDVWSYGIVLWEVMS----------YGERPY----WEMSN-QDVIKAVDEGYRL 240
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 241 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 18/237 (7%)
Query: 31 AFSYNQLKIATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFM 86
A + + A F +G+G FG+VY R Q I+A+KVL +E E +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 87 SEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKAR 146
EV +++ H N+++L+G D L+ +Y P + + L ++ +KF +
Sbjct: 62 REVEIQSHLR--HPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRT 115
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 206
I + L+Y H + V+HRDIK N+LL KI+DFG S P + T
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RT 169
Query: 207 RVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
+ GTL YL PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 170 TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 17/209 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGR---LQD--GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ ++G+G FGSV R LQD G +VAVK L +++ ++F E+ + ++
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-- 72
Query: 99 HENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H+N+VK G C R L+ +Y+P SL L +R + I +G
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL---LQYTSQICKG 129
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGY 214
+ Y+ + +HRD+ T NIL++ KI DFGL+K+ P++ + G + +
Sbjct: 130 MEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
APE + + SDV+SFGV+L E+ +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 132/278 (47%), Gaps = 32/278 (11%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V +GRL+ + VA+K L +++ +EF+SE + M H N+++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE--HPNIIR 79
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G + +++ ++M N +L L + +F ++ GI G+ Y+ E
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAEM- 135
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVAGTLG--YLAPEYA 220
VHRD+ NIL++ N K+SDFGLS+ EN++ ++ + G + + APE
Sbjct: 136 --SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 221 ISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPML 280
+ T SD +S+G+++ E++S GE W M N ++++N ++
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMS----------FGERPY----WDMSN-QDVINAIEQDY 238
Query: 281 YGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + ++
Sbjct: 239 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 276
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 34 YNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMA 93
Y +I + ++G G FG V G+ + VA+K++ E E EF+ E M
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMM 74
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N++ HE LV+L+G C ++ +YM N L L + R +F + E+ +
Sbjct: 75 NLS--HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDV 129
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
+ Y+ + +HRD+ N L++ K+SDFGLS+ ++ S +
Sbjct: 130 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 186
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ PE + + + KSD+++FGVL+ EI S
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 130/277 (46%), Gaps = 31/277 (11%)
Query: 50 IGEGGFGSVYKGRLQDGT-----IVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLV 103
IG G FG VYKG L+ + VA+K L + ++ +F+ E M + H N++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS--HHNII 109
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+L G +++ +YM N +L + L ++ +F ++ GI G+ Y+
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAI 221
+ VHRD+ NIL++ N K+SDFGLS++ ++ T G + + APE
Sbjct: 167 ---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLY 281
+ T SDV+SFG+++ E+++ GE W + N E+M ++
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMT----------YGE----RPYWELSN-HEVMKAINDGFR 268
Query: 282 GNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ + C Q++ RP+ + + +++
Sbjct: 269 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 66 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYL 173
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN 94
+ +I + K+G G FG V+ T VAVK + S E F++E M
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKT 233
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ H+ LVKLH P I+ ++M SL L +E + + I
Sbjct: 234 LQ--HDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIA 288
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL---FPENTTHISTRVAGT 211
G+A+I Q + +HRD++ +NIL+ + KI+DFGL+++ FP
Sbjct: 289 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFP------------- 332
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE G T KSDV+SFG+LL+EIV+
Sbjct: 333 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 101/197 (51%), Gaps = 9/197 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A M + H NLV+L
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLL 73
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G C P ++ ++M +L L E R + + I + Y+ ++
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK--- 128
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
+ +HRD+ N L+ +N K++DFGLS+L +T + + APE + +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 227 RKSDVYSFGVLLLEIVS 243
KSDV++FGVLL EI +
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 30/276 (10%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V GRL+ VA+K L V +++ ++F+ E + M + H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIR 110
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G ++V + M N SL L K A+F ++ GI G+ Y+ +
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM- 166
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG--YLAPEYAIS 222
VHRD+ NIL++ N K+SDFGLS++ ++ T G + + +PE
Sbjct: 167 --GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG 282
+ T SDV+S+G++L E++S GE W M N ++++ VD
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS----------YGER----PYWEMSN-QDVIKAVDEGYRL 269
Query: 283 NFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + +++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 19/257 (7%)
Query: 11 PSRVSAENTIGGEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGR-LQDGTIV 69
P + EN E K N S + + A F +G+G FG+VY R Q I+
Sbjct: 4 PLPSAPENNPEEELASKQKNEES-KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 70 AVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 126
A+KVL +E E + EV +++ H N+++L+G D L+ +Y P +
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILEYAPLGT 120
Query: 127 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 186
+ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 121 VYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL 173
Query: 187 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVSGR 245
KI+DFG S P + T + GTL YL PE I GR+ K D++S GVL E + G+
Sbjct: 174 KIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 229
Query: 246 TAVDFDVQLGEYHLVDK 262
+ + Y + +
Sbjct: 230 PPFEANTYQETYKRISR 246
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 18/237 (7%)
Query: 31 AFSYNQLKIATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFM 86
A + + A F +G+G FG+VY R Q I+A+KVL +E E +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 87 SEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKAR 146
EV +++ H N+++L+G D L+ +Y P ++ + L ++ +KF +
Sbjct: 62 REVEIQSHLR--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRT 115
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 206
I + L+Y H + V+HRDIK N+LL KI+DFG S P + T
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RT 169
Query: 207 RVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
+ GTL YL PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 170 TLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 69 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 122
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 176
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V +GRL+ + VA+K L +++ +EF+SE + M H N+++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE--HPNIIR 81
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G + +++ ++M N +L L + +F ++ GI G+ Y+ E
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAEM- 137
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG------YLAPE 218
VHRD+ NIL++ N K+SDFGLS+ EN++ + +LG + APE
Sbjct: 138 --SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE--TSSLGGKIPIRWTAPE 193
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDP 278
+ T SD +S+G+++ E++S GE W M N ++++N ++
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMS----------FGERPY----WDMSN-QDVINAIEQ 238
Query: 279 MLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + ++
Sbjct: 239 DYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALD 278
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 83 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 136
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 137 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 190
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 191 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 237
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 66 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 173
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 67 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 120
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T ++GTL YL
Sbjct: 121 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGTLDYL 174
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 175 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 66 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYL 173
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 67 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 120
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 121 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 174
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 175 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 66 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 30/311 (9%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 266
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 267 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 322
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HR++ N L+ +N K++DFGLS+L +T
Sbjct: 323 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 379
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGMYNSK 270
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---- 435
Query: 271 ELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP---QMSTAIKMMNGETNI-DGX 326
PE + ++ C Q RP ++ A + M E++I D
Sbjct: 436 ------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 483
Query: 327 DVEISQPGLIG 337
+ E+ + L G
Sbjct: 484 EKELGKENLYG 494
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 65 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 118
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 119 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 172
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 173 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 219
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 18/215 (8%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 69 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 122
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 176
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVD 249
PE I GR+ K D++S GVL E + G+ +
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQDGTI----VAVKVLSVESKQGE---KEFMSEVA 90
KI ++ +K+G GG +VY L + TI VA+K + + ++ E K F EV
Sbjct: 7 KIINERYKIVDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH 63
Query: 91 SMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
+ + ++ H+N+V + + C LV +Y+ +LS+ + +I+
Sbjct: 64 NSSQLS--HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQIL 121
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
GI H+ +VHRDIK NIL+D N KI DFG++K E + + V G
Sbjct: 122 DGIKHA----HDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG 174
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
T+ Y +PE A +D+YS G++L E++ G
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 66 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 70 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 123
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 177
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 178 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 224
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 71 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 124
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 178
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 179 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G G FG V G+ + VA+K++ E E EF+ E M N++ HE LV+L+G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
C ++ +YM N L L + R +F + E+ + + Y+ +
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 125
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
+HRD+ N L++ K+SDFGLS+ ++ S + + PE + + +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 228 KSDVYSFGVLLLEIVS 243
KSD+++FGVL+ EI S
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G G FG V G+ + VA+K++ E E EF+ E M N++ HE LV+L+G
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYG 70
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
C ++ +YM N L L + R +F + E+ + + Y+ +
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 124
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
+HRD+ N L++ K+SDFGLS+ ++ S + + PE + + +
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 228 KSDVYSFGVLLLEIVS 243
KSD+++FGVL+ EI S
Sbjct: 185 KSDIWAFGVLMWEIYS 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G G FG V G+ + VA+K++ E E EF+ E M N++ HE LV+L+G
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYG 66
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
C ++ +YM N L L + R +F + E+ + + Y+ +
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 120
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
+HRD+ N L++ K+SDFGLS+ ++ S + + PE + + +
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 228 KSDVYSFGVLLLEIVS 243
KSD+++FGVL+ EI S
Sbjct: 181 KSDIWAFGVLMWEIYS 196
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 269
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 270 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMAT 325
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HR++ N L+ +N K++DFGLS+L +T
Sbjct: 326 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 438
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 9/196 (4%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G G FG V G+ + VA+K++ E E EF+ E M N++ HE LV+L+G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLVQLYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
C ++ +YM N L L + R +F + E+ + + Y+ +
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 125
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
+HRD+ N L++ K+SDFGLS+ ++ S + + PE + + +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 228 KSDVYSFGVLLLEIVS 243
KSD+++FGVL+ EI S
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 18/215 (8%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 63 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 116
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 117 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 170
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVD 249
PE I GR+ K D++S GVL E + G+ +
Sbjct: 171 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKL 105
+G+G FG+VY R Q I+A+KVL +E E + EV +++ H N+++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR--HPNILRL 77
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
+G D L+ +Y P ++ + L ++ ++F + I + L+Y H +
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHSK-- 131
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
V+HRDIK N+LL N KI+DFG S P + T + GTL YL PE I GR+
Sbjct: 132 -RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRM 186
Query: 226 -TRKSDVYSFGVLLLEIVSG 244
K D++S GVL E + G
Sbjct: 187 HDEKVDLWSLGVLCYEFLVG 206
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVAS 91
+Y++ ++ +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 308
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M + H NLV+L G C P ++ ++M +L L E R + +
Sbjct: 309 MKEIK--HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMAT 364
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I + Y+ ++ + +HR++ N L+ +N K++DFGLS+L +T
Sbjct: 365 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 421
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLVDKAWGM 266
+ + APE + + KSDV++FGVLL EI + + + L + Y L++K + M
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 477
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 15/219 (6%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNV 97
+I + K+G G FG V+ G + T VAVK L + F+ E M +
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQ- 65
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H+ LV+L+ ++ ++M SL L +E K + I G+
Sbjct: 66 -HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEG--GKVLLPKLIDFSAQIAEGM 122
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
AYI + + +HRD++ +N+L+ ++ KI+DFGL+++ +N + + AP
Sbjct: 123 AYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 179
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVS-------GRTAVD 249
E G T KS+V+SFG+LL EIV+ GRT D
Sbjct: 180 EAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNAD 218
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 18 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 72
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF K +I RG+ Y+H +
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK-- 127
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + + +H +++G++ ++APE
Sbjct: 128 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
S + +SDVY+FG++L E+++G+
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 23/212 (10%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQD-----GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ +++G+G FGSV R G +VAVK L +++F E+ + +
Sbjct: 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--- 81
Query: 99 HENLVKLHGGCIDGPCRI---LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG--I 153
H + + + G GP R LV +Y+P+ L L ++ RA+ A R ++ I
Sbjct: 82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARL--DASRLLLYSSQI 136
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--T 211
+G+ Y+ VHRD+ NIL++ + KI+DFGL+KL P + + R G
Sbjct: 137 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE +R+SDV+SFGV+L E+ +
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 23/212 (10%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQD-----GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ +++G+G FGSV R G +VAVK L +++F E+ + +
Sbjct: 12 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--- 68
Query: 99 HENLVKLHGGCIDGPCRI---LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG--I 153
H + + + G GP R LV +Y+P+ L L ++ RA+ A R ++ I
Sbjct: 69 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARL--DASRLLLYSSQI 123
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--T 211
+G+ Y+ VHRD+ NIL++ + KI+DFGL+KL P + + R G
Sbjct: 124 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 180
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE +R+SDV+SFGV+L E+ +
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 23/212 (10%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQD-----GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ +++G+G FGSV R G +VAVK L +++F E+ + +
Sbjct: 13 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--- 69
Query: 99 HENLVKLHGGCIDGPCRI---LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG--I 153
H + + + G GP R LV +Y+P+ L L ++ RA+ A R ++ I
Sbjct: 70 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARL--DASRLLLYSSQI 124
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--T 211
+G+ Y+ VHRD+ NIL++ + KI+DFGL+KL P + + R G
Sbjct: 125 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE +R+SDV+SFGV+L E+ +
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 109/228 (47%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 71 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 124
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + T + GTL YL
Sbjct: 125 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 178
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR K D++S GVL E + G+ + + Y + +
Sbjct: 179 PPE-XIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 18/237 (7%)
Query: 31 AFSYNQLKIATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFM 86
A + + A F +G+G FG+VY R Q I+A+KVL +E E +
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 87 SEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKAR 146
EV +++ H N+++L+G D L+ +Y P + + L ++ +KF +
Sbjct: 62 REVEIQSHLR--HPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRT 115
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 206
I + L+Y H + V+HRDIK N+LL KI+DFG S P +
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RX 169
Query: 207 RVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
+ GTL YL PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 170 XLXGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 23/212 (10%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQD-----GTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
++ +++G+G FGSV R G +VAVK L +++F E+ + +
Sbjct: 9 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--- 65
Query: 99 HENLVKLHGGCIDGPCRI---LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG--I 153
H + + + G GP R LV +Y+P+ L L ++ RA+ A R ++ I
Sbjct: 66 HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL---QRHRARL--DASRLLLYSSQI 120
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--T 211
+G+ Y+ VHRD+ NIL++ + KI+DFGL+KL P + R G
Sbjct: 121 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + APE +R+SDV+SFGV+L E+ +
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 68 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 121
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + + GTL YL
Sbjct: 122 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYL 175
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 176 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 84
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF K +I RG+ Y+H +
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK-- 139
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + +H +++G++ ++APE
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
S + +SDVY+FG++L E+++G+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 69 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 122
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + + GTL YL
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 176
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 68 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 121
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI++FG S P + T + GTL YL
Sbjct: 122 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYL 175
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 176 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 67 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 120
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + + GTL YL
Sbjct: 121 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCGTLDYL 174
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 175 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 69 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 122
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI++FG S P + T + GTL YL
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYL 176
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 69 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 122
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + + GTL YL
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYL 176
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVD 249
PE I GR+ K D++S GVL E + G+ +
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 66 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + + GTL YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYL 173
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVD 249
PE I GR+ K D++S GVL E + G+ +
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 19/257 (7%)
Query: 11 PSRVSAENTIGGEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGR-LQDGTIV 69
P + EN E K N S + + A F +G+G FG+VY R Q I+
Sbjct: 4 PLPSAPENNPEEELASKQKNEES-KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 70 AVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS 126
A+KVL +E E + EV +++ H N+++L+G D L+ +Y P +
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYLILEYAPLGT 120
Query: 127 LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 186
+ + L ++ +KF + I + L+Y H + V+HRDIK N+LL
Sbjct: 121 VYREL----QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL 173
Query: 187 KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVSGR 245
KI+DFG S P + + GTL YL PE I GR+ K D++S GVL E + G+
Sbjct: 174 KIADFGWSVHAPSSR---RDDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 229
Query: 246 TAVDFDVQLGEYHLVDK 262
+ + Y + +
Sbjct: 230 PPFEANTYQETYKRISR 246
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 66 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + + GTL YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 173
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVD 249
PE I GR+ K D++S GVL E + G+ +
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 84
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF K +I RG+ Y+H +
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK-- 139
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + +H +++G++ ++APE
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
S + +SDVY+FG++L E+++G+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R Q I+A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 69 R--HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 122
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + + GTL YL
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYL 176
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVD 249
PE I GR+ K D++S GVL E + G+ +
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGRLQDGT-IVAVKVL---SVESKQGEKEFMSEVASMANV 95
A F +G+G FG+VY R ++ I+A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
H N+++L+G D L+ +Y P ++ + L ++ +KF + I +
Sbjct: 66 R--HPNILRLYGYFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
L+Y H + V+HRDIK N+LL KI+DFG S P + + GTL YL
Sbjct: 120 ALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 173
Query: 216 APEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
PE I GR+ K D++S GVL E + G+ + + Y + +
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR 220
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCHENLVKL 105
+G+G FG+VY R Q I+A+KVL +E E + EV +++ H N+++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR--HPNILRL 77
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
+G D L+ +Y P ++ + L ++ ++F + I + L+Y H +
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHSK-- 131
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
V+HRDIK N+LL N KI+DFG S P + + GTL YL PE I GR+
Sbjct: 132 -RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPE-MIEGRM 186
Query: 226 -TRKSDVYSFGVLLLEIVSG 244
K D++S GVL E + G
Sbjct: 187 HDEKVDLWSLGVLCYEFLVG 206
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 32/278 (11%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V G L+ VA+K L S +++ ++F+SE + M + H N++
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD--HPNVIH 98
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G +++ ++M N SL L + +F ++ GI G+ Y+ +
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM- 154
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS-TRVAG---TLGYLAPEYA 220
+ VHRD+ NIL++ N K+SDFGLS+ ++T+ + T G + + APE
Sbjct: 155 --NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 221 ISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPML 280
+ T SDV+S+G+++ E++S GE W M N ++++N ++
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMS----------YGER----PYWDMTN-QDVINAIEQDY 257
Query: 281 YGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
P + ++ L C Q+ RP+ + ++
Sbjct: 258 RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 127/287 (44%), Gaps = 53/287 (18%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG 108
IG GGFG V+K + + DG +K + +++ E+E + +A + +VN+ H N G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE-VKALAKLDHVNIVHYN------G 71
Query: 109 CIDG-----------------PCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
C DG C + ++ +L Q + E++R K E+
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFE 129
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I +G+ YIH + +++RD+K SNI L KI DFGL + R GT
Sbjct: 130 QITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--XRSKGT 184
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKE 271
L Y++PE S ++ D+Y+ G++L E++ H+ D A+ SK
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL---------------HVCDTAFE--TSKF 227
Query: 272 LMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
+L D ++ F + E K+ + +K + RP S ++ +
Sbjct: 228 FTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILRTLT 270
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 50 IGEGGFGSV---YKGRLQDGT--IVAVKVLSVES-KQGEKEFMSEVASMANVNVCHENLV 103
+GEG FG V DGT +VAVK L ++ Q + E+ + + HE+++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY--HEHII 96
Query: 104 KLHGGCID-GPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
K G C D G + LV +Y+P SL L R G I G+AY+H
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLH 151
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEY 219
+ H +HRD+ N+LLD + KI DFGL+K PE R G + + APE
Sbjct: 152 AQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 220 AISGRLTRKSDVYSFGVLLLEIVS 243
+ SDV+SFGV L E+++
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 30/218 (13%)
Query: 51 GEGGFGSVYKGRLQDGTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHENLVKLHGGC 109
G FG V+K +L + VAVK+ ++ KQ + E+ EV S+ + HEN+++ G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMK--HENILQFIGAE 87
Query: 110 IDGPC----RILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI- 164
G L+ + SLS L + W I + RGLAY+HE+I
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 165 ------QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR-VAGTLGYLAP 217
+P + HRDIK+ N+LL N I+DFGL+ F + T GT Y+AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 218 EYAISGRLTRKS------DVYSFGVLLLEIVSGRTAVD 249
E + G + + D+Y+ G++L E+ S TA D
Sbjct: 203 E-VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 66/300 (22%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG 108
IG GGFG V+K + + DG ++ + +++ E+E + +A + +VN+ H N G
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE-VKALAKLDHVNIVHYN------G 72
Query: 109 CIDG------------------------------PCRILVYDYMPNNSLSQTLLGEEKRR 138
C DG C + ++ +L Q + E++R
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRG 130
Query: 139 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 198
K E+ I +G+ YIH + ++HRD+K SNI L KI DFGL
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 199 ENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYH 258
+ TR GTL Y++PE S ++ D+Y+ G++L E++ H
Sbjct: 188 NDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---------------H 230
Query: 259 LVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
+ D A+ SK +L D ++ F + E K+ + +K + RP S ++ +
Sbjct: 231 VCDTAFE--TSKFFTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILRTLT 284
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 40/308 (12%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQD------GTIVAVKVLSVESKQGEK 83
+ F ++ +++ ++G+G FG VY+G +D T VAVK ++ + E+
Sbjct: 2 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 61
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M CH ++V+L G G ++V + M + L ++L E +
Sbjct: 62 IEFLNEASVMKGFT-CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 119
Query: 140 KFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+E+I I G+AY++ + VHRD+ N ++ +F KI DFG+++
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRD 176
Query: 197 FPENTTHISTRVAG----TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDV 252
E R G + ++APE G T SD++SFGV+L EI S
Sbjct: 177 IXETDX---XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 224
Query: 253 QLGEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMST 312
L ++ + ++++++ V Y + P+N R + +C Q K+RP
Sbjct: 225 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 278
Query: 313 AIKMMNGE 320
+ ++ +
Sbjct: 279 IVNLLKDD 286
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 142/306 (46%), Gaps = 36/306 (11%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQD------GTIVAVKVLSVESKQGEK 83
+ F ++ +++ ++G+G FG VY+G +D T VAVK ++ + E+
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M CH ++V+L G G ++V + M + L ++L E +
Sbjct: 65 IEFLNEASVMKGFT-CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 140 KFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+E+I I G+AY++ + VHRD+ N ++ +F KI DFG+++
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 197 FPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E T + G L ++APE G T SD++SFGV+L EI S
Sbjct: 180 IYE-TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------- 227
Query: 255 GEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAI 314
L ++ + ++++++ V Y + P+N R + +C Q K+RP +
Sbjct: 228 ----LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 315 KMMNGE 320
++ +
Sbjct: 284 NLLKDD 289
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 15/213 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVE--SKQGEKEFMSEVASMAN 94
K + F+ +G G FG V+ R +G A+KVL E + + E ++ M +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ V H ++++ G D ++ DY+ L L ++ +F + +
Sbjct: 62 I-VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL----RKSQRFPNPVAKFYAAEVC 116
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
L Y+H + +++RD+K NILLD+N + KI+DFG +K P+ ++ + GT Y
Sbjct: 117 LALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDY 169
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTA 247
+APE + + D +SFG+L+ E+++G T
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 40/308 (12%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQD------GTIVAVKVLSVESKQGEK 83
+ F ++ +++ ++G+G FG VY+G +D T VAVK ++ + E+
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M CH ++V+L G G ++V + M + L ++L E +
Sbjct: 65 IEFLNEASVMKGFT-CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 140 KFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+E+I I G+AY++ + VHRD+ N ++ +F KI DFG+++
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 197 FPENTTHISTRVAG----TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDV 252
E R G + ++APE G T SD++SFGV+L EI S
Sbjct: 180 IXETDX---XRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 227
Query: 253 QLGEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMST 312
L ++ + ++++++ V Y + P+N R + +C Q K+RP
Sbjct: 228 ------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLE 281
Query: 313 AIKMMNGE 320
+ ++ +
Sbjct: 282 IVNLLKDD 289
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 142/306 (46%), Gaps = 36/306 (11%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQD------GTIVAVKVLSVESKQGEK 83
+ F ++ +++ ++G+G FG VY+G +D T VAVK ++ + E+
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M CH ++V+L G G ++V + M + L ++L E +
Sbjct: 65 IEFLNEASVMKGFT-CH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 140 KFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+E+I I G+AY++ + VHRD+ N ++ +F KI DFG+++
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 197 FPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E T + G L ++APE G T SD++SFGV+L EI S
Sbjct: 180 IYE-TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------- 227
Query: 255 GEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAI 314
L ++ + ++++++ V Y + P+N R + +C Q K+RP +
Sbjct: 228 ----LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 315 KMMNGE 320
++ +
Sbjct: 284 NLLKDD 289
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 36/287 (12%)
Query: 49 KIGEGGFGSVYKGRLQD------GTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHEN 101
++G+G FG VY+G +D T VAVK ++ + E+ EF++E + M CH +
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT-CH-H 80
Query: 102 LVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGR 155
+V+L G G ++V + M + L ++L E + +E+I I
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-- 213
G+AY++ + VHRD+ N ++ +F KI DFG+++ E T + G L
Sbjct: 141 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVR 196
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELM 273
++APE G T SD++SFGV+L EI S L ++ + ++++++
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 241
Query: 274 NLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNGE 320
V Y + P+N R + +C Q K+RP + ++ +
Sbjct: 242 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 32/255 (12%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENL 102
F+ N +G+G F VY+ + G VA+K++ +K+ M + + V +N
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI-------DKKAMYKAGMVQRV----QNE 61
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLL-----GEEKRRAK-----FGWKARREIIMG 152
VK+H + P + +Y+Y +++ +L GE R K F R +
Sbjct: 62 VKIHCQ-LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ 120
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGT 211
I G+ Y+H ++HRD+ SN+LL +N N KI+DFGL ++L + H + + GT
Sbjct: 121 IITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGT 175
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDV---QLGEYHLVDKAWGMYN 268
Y++PE A +SDV+S G + ++ GR D D L + L D +
Sbjct: 176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFL 235
Query: 269 SKELMNLVDPMLYGN 283
S E +L+ +L N
Sbjct: 236 SIEAKDLIHQLLRRN 250
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 116/220 (52%), Gaps = 30/220 (13%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEF-MSEVASMANVNV 97
+++ F+ K+G G + +VYKG G VA+K + ++S++G + E++ M +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK- 61
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNN--------SLSQTLLGEEKRRAK-FGWKARRE 148
HEN+V+L+ LV+++M N+ ++ T G E K F W+
Sbjct: 62 -HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ---- 116
Query: 149 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHIST 206
+ +GLA+ HE ++HRD+K N+L+++ K+ DFGL++ F P NT S+
Sbjct: 117 ----LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT--FSS 167
Query: 207 RVAGTLGYLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGR 245
V TL Y AP+ + R S D++S G +L E+++G+
Sbjct: 168 EVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G G FG V G+ + VAVK++ E E EF E +M ++ H LVK +G
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLS--HPKLVKFYG 70
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR--EIIMGIGRGLAYIHEEIQ 165
C +V +Y+ N L L K G + + E+ + G+A++
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGK-----GLEPSQLLEMCYDVCEGMAFLESH-- 123
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+HRD+ N L+D++ K+SDFG+++ ++ S + + APE +
Sbjct: 124 -QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 226 TRKSDVYSFGVLLLEIVS-GRTAVDF 250
+ KSDV++FG+L+ E+ S G+ D
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 68
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF +I +G+ Y+H +
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + + +H +++G++ ++APE
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
+ +SDVY+FG++L E+++G+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 50 IGEGGFGSV---YKGRLQDGT--IVAVKVLSVES-KQGEKEFMSEVASMANVNVCHENLV 103
+GEG FG V DGT +VAVK L + Q + E+ + + HE+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY--HEHII 79
Query: 104 KLHGGCIDGPCRIL--VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
K G C D + L V +Y+P SL L R G I G+AY+H
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEY 219
+ H +HR++ N+LLD + KI DFGL+K PE + R G + + APE
Sbjct: 135 SQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 220 AISGRLTRKSDVYSFGVLLLEIVS 243
+ SDV+SFGV L E+++
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 50 IGEGGFGSV---YKGRLQDGT--IVAVKVLSVES-KQGEKEFMSEVASMANVNVCHENLV 103
+GEG FG V DGT +VAVK L + Q + E+ + + HE+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY--HEHII 79
Query: 104 KLHGGCIDGPCRIL--VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
K G C D + L V +Y+P SL L R G I G+AY+H
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEY 219
+ H +HR++ N+LLD + KI DFGL+K PE + R G + + APE
Sbjct: 135 AQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 220 AISGRLTRKSDVYSFGVLLLEIVS 243
+ SDV+SFGV L E+++
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 110/227 (48%), Gaps = 43/227 (18%)
Query: 50 IGEGGFGSV-------YKGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHEN 101
+GEG FG V KGR T VAVK+L + E ++ +SE + VN H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN--HPH 87
Query: 102 LVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGW--------------KAR 146
++KL+G C DGP +L+ +Y SL L E R+ G+
Sbjct: 88 VIKLYGACSQDGPL-LLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 147 REIIMG--------IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP 198
R + MG I +G+ Y+ E +VHRD+ NIL+ + KISDFGLS+
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 199 ENTTHISTRVAGTL--GYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
E +++ R G + ++A E T +SDV+SFGVLL EIV+
Sbjct: 202 EEDSYVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 50 IGEGGFGSVYKGRLQ----DGTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V G L+ VA+K L S +++ ++F+SE + M + H N++
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD--HPNVIH 72
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G +++ ++M N SL L + +F ++ GI G+ Y+ +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM- 128
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS-TRVAG---TLGYLAPEYA 220
+ VHR + NIL++ N K+SDFGLS+ ++T+ + T G + + APE
Sbjct: 129 --NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 221 ISGRLTRKSDVYSFGVLLLEIVS 243
+ T SDV+S+G+++ E++S
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMS 209
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 68
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF +I +G+ Y+H +
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + + +H +++G++ ++APE
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
+ +SDVY+FG++L E+++G+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG- 108
IG G +G+VYKG L D VAVKV S ++Q F++E + H+N+ + G
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVGD 76
Query: 109 ---CIDGPCR-ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
DG +LV +Y PN SL + L W + + + RGLAY+H E+
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 165 ------QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-------PENTTHISTRVAGT 211
+P + HRD+ + N+L+ + ISDFGLS P + + GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 212 LGYLAPEY---AISGR----LTRKSDVYSFGVLLLEI 241
+ Y+APE A++ R ++ D+Y+ G++ EI
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 111/226 (49%), Gaps = 41/226 (18%)
Query: 50 IGEGGFGSV-------YKGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHEN 101
+GEG FG V KGR T VAVK+L + E ++ +SE + VN H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN--HPH 87
Query: 102 LVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGW--------------KAR 146
++KL+G C DGP +L+ +Y SL L E R+ G+
Sbjct: 88 VIKLYGACSQDGPL-LLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 147 REIIMG--------IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LF 197
R + MG I +G+ Y+ E +VHRD+ NIL+ + KISDFGLS+ ++
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 198 PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
E++ ++ + ++A E T +SDV+SFGVLL EIV+
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 16 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 70
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF +I +G+ Y+H +
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK-- 125
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + + +H +++G++ ++APE
Sbjct: 126 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
+ +SDVY+FG++L E+++G+
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 73
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF +I +G+ Y+H +
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK-- 128
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + + +H +++G++ ++APE
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
+ +SDVY+FG++L E+++G+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 73
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF +I +G+ Y+H +
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK-- 128
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + + +H +++G++ ++APE
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
+ +SDVY+FG++L E+++G+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 49 KIGEGGFGSVYKG--RLQDGTI-VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
++G G FGSV +G R++ I VA+KVL +++ + +E M E M ++ + +V+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD--NPYIVR 74
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G C +LV + L + L+G +R + E++ + G+ Y+ E+
Sbjct: 75 LIGVC-QAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK- 129
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAIS 222
+ VHRD+ N+LL KISDFGLSK + ++ + R AG L + APE
Sbjct: 130 --NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 187
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
+ + +SDV+S+GV + E +S
Sbjct: 188 RKFSSRSDVWSYGVTMWEALS 208
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 111/226 (49%), Gaps = 41/226 (18%)
Query: 50 IGEGGFGSV-------YKGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHEN 101
+GEG FG V KGR T VAVK+L + E ++ +SE + VN H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN--HPH 87
Query: 102 LVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGW--------------KAR 146
++KL+G C DGP +L+ +Y SL L E R+ G+
Sbjct: 88 VIKLYGACSQDGPL-LLIVEYAKYGSLRGFL--RESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 147 REIIMG--------IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LF 197
R + MG I +G+ Y+ E +VHRD+ NIL+ + KISDFGLS+ ++
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 198 PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
E++ ++ + ++A E T +SDV+SFGVLL EIV+
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 138/287 (48%), Gaps = 43/287 (14%)
Query: 47 SNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEK--EFMSEVASMANVNVCHENLVK 104
S +IG G FG+VYKG+ VAVK+L V E+ F +EVA + H N++
Sbjct: 41 STRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTR--HVNIL- 95
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G + +V + +SL + L +E KF +I +G+ Y+H +
Sbjct: 96 LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK- 151
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YA 220
+++HRD+K++NI L + KI DFGL+ + + + + G++ ++APE
Sbjct: 152 --NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 221 ISGRLTRKSDVYSFGVLLLEIVSG---------RTAVDFDVQLGEYHLVDKAWGMYNSKE 271
+ + +SDVYS+G++L E+++G R + F V G Y S +
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG-----------YASPD 258
Query: 272 LMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMN 318
L LY N P+ R + + V+E+ L PQ+ ++I+++
Sbjct: 259 LSK-----LYKNCPKAMK-RLVADCVKKVKEERPLFPQILSSIELLQ 299
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 40/289 (13%)
Query: 49 KIGEGGFGSVYKGRLQD------GTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHEN 101
++G+G FG VY+G +D T VAVK ++ + E+ EF++E + M CH +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT-CH-H 81
Query: 102 LVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGR 155
+V+L G G ++V + M + L ++L E + +E+I I
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG----T 211
G+AY++ + VHRD+ N ++ +F KI DFG+++ E R G
Sbjct: 142 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX---XRKGGKGLLP 195
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKE 271
+ ++APE G T SD++SFGV+L EI S L ++ + ++++
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQ 240
Query: 272 LMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNGE 320
++ V Y + P+N R + +C Q +RP + ++ +
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 138/294 (46%), Gaps = 36/294 (12%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK 83
+ F ++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+
Sbjct: 4 DVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M N CH ++V+L G G +++ + M L ++L E +
Sbjct: 64 IEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 140 KFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+ ++I G G+AY++ VHRD+ N ++ ++F KI DFG+++
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 197 FPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E T + G L +++PE G T SDV+SFGV+L EI +
Sbjct: 179 IYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 226
Query: 255 GEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
L ++ + ++++++ V + P+N ++ +C Q K+RP
Sbjct: 227 ----LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRP 276
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 41 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 95
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF +I +G+ Y+H +
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK-- 150
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + + +H +++G++ ++APE
Sbjct: 151 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
+ +SDVY+FG++L E+++G+
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 96
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF +I +G+ Y+H +
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK-- 151
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + + +H +++G++ ++APE
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
+ +SDVY+FG++L E+++G+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKG-RLQDGTIV----AVKVLS-VESKQGEKEFMSEVASMANVNVCHENLV 103
+G G FG+VYKG + +G V A+K+L+ + EFM E MA+++ H +LV
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD--HPHLV 80
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+L G C+ P LV MP+ L + + + + G + + I +G+ Y+ E
Sbjct: 81 RLLGVCL-SPTIQLVTQLMPHGCLLEYV---HEHKDNIGSQLLLNWCVQIAKGMMYLEER 136
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAIS 222
+VHRD+ N+L+ + KI+DFGL++L + + + ++A E
Sbjct: 137 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
+ T +SDV+S+GV + E+++
Sbjct: 194 RKFTHQSDVWSYGVTIWELMT 214
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 136/291 (46%), Gaps = 40/291 (13%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK-EFMS 87
++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+ EF++
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRAKFGWK 144
E + M N CH ++V+L G G +++ + M L ++L E +
Sbjct: 63 EASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 145 ARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT 201
+ ++I G G+AY++ VHRD+ N ++ ++F KI DFG+++ E
Sbjct: 121 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 202 THISTRVAG----TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEY 257
R G + +++PE G T SDV+SFGV+L EI +
Sbjct: 178 X---XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------------- 220
Query: 258 HLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
L ++ + ++++++ V + P+N L++ +C Q K+RP
Sbjct: 221 -LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRP 270
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKG-RLQDGTIV----AVKVLS-VESKQGEKEFMSEVASMANVNVCHENLV 103
+G G FG+VYKG + +G V A+K+L+ + EFM E MA+++ H +LV
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD--HPHLV 103
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+L G C+ P LV MP+ L + + + + G + + I +G+ Y+ E
Sbjct: 104 RLLGVCL-SPTIQLVTQLMPHGCLLEYV---HEHKDNIGSQLLLNWCVQIAKGMMYLEER 159
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAIS 222
+VHRD+ N+L+ + KI+DFGL++L + + + ++A E
Sbjct: 160 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 216
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
+ T +SDV+S+GV + E+++
Sbjct: 217 RKFTHQSDVWSYGVTIWELMT 237
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 42/284 (14%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 94
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEE-----KRRAKFGWKARREIIMGIGRGLA 158
L G C+ ++V YM + L + E K FG + + +G+
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMK 146
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLG--YL 215
Y+ + VHRD+ N +LD+ F K++DFGL++ ++ + + + L ++
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
A E + + T KSDV+SFGVLL E+++ R A + + + D + + L+
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYP----DVNTFDITVYLLQGRRLLQ- 257
Query: 276 VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 258 ---------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 292
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 101
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L ++ + R
Sbjct: 102 NIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N +
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKNT 216
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 68
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF +I +G+ Y+H +
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK-- 123
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + +H +++G++ ++APE
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
+ +SDVY+FG++L E+++G+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 141/306 (46%), Gaps = 36/306 (11%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK 83
+ + ++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+
Sbjct: 7 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M N CH ++V+L G G +++ + M L ++L E +
Sbjct: 67 IEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 140 KFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+ ++I G G+AY++ VHRD+ N ++ ++F KI DFG+++
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 197 FPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E T + G L +++PE G T SDV+SFGV+L EI +
Sbjct: 182 IYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 229
Query: 255 GEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAI 314
L ++ + ++++++ V + P+N ++ +C Q K+RP I
Sbjct: 230 ----LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
Query: 315 KMMNGE 320
+ E
Sbjct: 286 SSIKEE 291
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 87
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ Y+
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 141
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + + H T + ++A
Sbjct: 142 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ DV + D + + L+
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----NTFDITVYLLQGRRLLQ--- 250
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 251 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 285
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 93
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ Y+
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 147
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + + H T + ++A
Sbjct: 148 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ DV D + + L+
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQ--- 256
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 257 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 291
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 137/296 (46%), Gaps = 40/296 (13%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK 83
+ + ++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+
Sbjct: 7 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M N CH ++V+L G G +++ + M L ++L E +
Sbjct: 67 IEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 140 KFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+ ++I G G+AY++ VHRD+ N ++ ++F KI DFG+++
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 197 FPENTTHISTRVAG----TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDV 252
E R G + +++PE G T SDV+SFGV+L EI +
Sbjct: 182 IXETDX---XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------- 229
Query: 253 QLGEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
L ++ + ++++++ V + P+N ++ +C Q K+RP
Sbjct: 230 ------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRP 279
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 42/284 (14%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 95
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEE-----KRRAKFGWKARREIIMGIGRGLA 158
L G C+ ++V YM + L + E K FG + + +G+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMK 147
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYL 215
Y+ + VHRD+ N +LD+ F K++DFGL++ + + H T + ++
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
A E + + T KSDV+SFGVLL E+++ DV D + + L+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQ- 258
Query: 276 VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 259 ---------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 124/284 (43%), Gaps = 42/284 (14%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 92
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEE-----KRRAKFGWKARREIIMGIGRGLA 158
L G C+ ++V YM + L + E K FG + + +G+
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMK 144
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYL 215
Y+ + VHRD+ N +LD+ F K++DFGL++ + + H T + ++
Sbjct: 145 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
A E + + T KSDV+SFGVLL E+++ DV D + + L+
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQ- 255
Query: 276 VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 256 ---------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 290
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 141/306 (46%), Gaps = 36/306 (11%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK 83
+ + ++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+
Sbjct: 13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M N CH ++V+L G G +++ + M L ++L E +
Sbjct: 73 IEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 140 KFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+ ++I G G+AY++ VHRD+ N ++ ++F KI DFG+++
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 197 FPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E T + G L +++PE G T SDV+SFGV+L EI +
Sbjct: 188 IYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 235
Query: 255 GEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAI 314
L ++ + ++++++ V + P+N ++ +C Q K+RP I
Sbjct: 236 ----LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
Query: 315 KMMNGE 320
+ E
Sbjct: 292 SSIKEE 297
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 138/294 (46%), Gaps = 36/294 (12%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK 83
+ + ++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+
Sbjct: 6 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M N CH ++V+L G G +++ + M L ++L E +
Sbjct: 66 IEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 140 KFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+ ++I G G+AY++ VHRD+ N ++ ++F KI DFG+++
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 197 FPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E T + G L +++PE G T SDV+SFGV+L EI +
Sbjct: 181 IYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 228
Query: 255 GEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
L ++ + ++++++ V + P+N ++ +C Q K+RP
Sbjct: 229 ----LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRP 278
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 138/294 (46%), Gaps = 36/294 (12%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK 83
+ + ++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+
Sbjct: 6 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M N CH ++V+L G G +++ + M L ++L E +
Sbjct: 66 IEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 140 KFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+ ++I G G+AY++ VHRD+ N ++ ++F KI DFG+++
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 197 FPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E T + G L +++PE G T SDV+SFGV+L EI +
Sbjct: 181 IYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 228
Query: 255 GEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
L ++ + ++++++ V + P+N ++ +C Q K+RP
Sbjct: 229 ----LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRP 278
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 113
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ Y+
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 167
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + + H T + ++A
Sbjct: 168 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ R A + + + D + + L+
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYP----DVNTFDITVYLLQGRRLLQ--- 276
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 277 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 311
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 90
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ Y+
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 144
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + + H T + ++A
Sbjct: 145 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ DV D + + L+
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQ--- 253
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 254 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 42/284 (14%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 114
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEE-----KRRAKFGWKARREIIMGIGRGLA 158
L G C+ ++V YM + L + E K FG + + +G+
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--------LQVAKGMK 166
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYL 215
Y+ + VHRD+ N +LD+ F K++DFGL++ + + H T + ++
Sbjct: 167 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
A E + + T KSDV+SFGVLL E+++ R A + + + D + + L+
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYP----DVNTFDITVYLLQGRRLLQ- 277
Query: 276 VDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 278 ---------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 312
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 101
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L ++ + R
Sbjct: 102 NIIHLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N +
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKT 216
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 94
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ Y+
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 148
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + + H T + ++A
Sbjct: 149 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ DV D + + L+
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQ--- 257
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 258 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 292
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 101
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L ++ + R
Sbjct: 102 NIITLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N +
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKT 216
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 95
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ Y+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL 149
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN---TTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + + H T + ++A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ DV D + + L+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQ--- 258
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 259 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 34 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 88
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF +I +G+ Y+H +
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK-- 143
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT-THISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + +H +++G++ ++APE
Sbjct: 144 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
+ +SDVY+FG++L E+++G+
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK-HK 101
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L ++ + R
Sbjct: 102 NIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N +
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKT 216
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 136/289 (47%), Gaps = 36/289 (12%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK-EFMS 87
++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+ EF++
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRAKFGWK 144
E + M N CH ++V+L G G +++ + M L ++L E +
Sbjct: 65 EASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 145 ARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT 201
+ ++I G G+AY++ VHRD+ N ++ ++F KI DFG+++ E T
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-T 178
Query: 202 THISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHL 259
+ G L +++PE G T SDV+SFGV+L EI + L
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------L 223
Query: 260 VDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
++ + ++++++ V + P+N ++ +C Q K+RP
Sbjct: 224 AEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRP 272
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 17/204 (8%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSV--ESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG+VYKG+ VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNIL-L 96
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G P +V + +SL L E KF +I +G+ Y+H +
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK-- 151
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE-NTTHISTRVAGTLGYLAPE---YAI 221
++HRD+K++NI L ++ KI DFGL+ + +H +++G++ ++APE
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 222 SGRLTRKSDVYSFGVLLLEIVSGR 245
+ +SDVY+FG++L E+++G+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 141/306 (46%), Gaps = 36/306 (11%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK 83
+ + ++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+
Sbjct: 35 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 94
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRA 139
EF++E + M N CH ++V+L G G +++ + M L ++L E +
Sbjct: 95 IEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 140 KFGWKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+ ++I G G+AY++ VHRD+ N ++ ++F KI DFG+++
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 197 FPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E T + G L +++PE G T SDV+SFGV+L EI +
Sbjct: 210 IYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 257
Query: 255 GEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAI 314
L ++ + ++++++ V + P+N ++ +C Q K+RP I
Sbjct: 258 ----LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
Query: 315 KMMNGE 320
+ E
Sbjct: 314 SSIKEE 319
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 36/301 (11%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK-EFMS 87
++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+ EF++
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRAKFGWK 144
E + M N CH ++V+L G G +++ + M L ++L E +
Sbjct: 65 EASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 145 ARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT 201
+ ++I G G+AY++ VHRD+ N + ++F KI DFG+++ E T
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE-T 178
Query: 202 THISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHL 259
+ G L +++PE G T SDV+SFGV+L EI + L
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------L 223
Query: 260 VDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
++ + ++++++ V + P+N L++ +C Q K+RP I +
Sbjct: 224 AEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 283
Query: 320 E 320
E
Sbjct: 284 E 284
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 23/229 (10%)
Query: 32 FSYNQ-LKIATNGFRWSNKIGEGGFGSVYKGRL-----QDGTI-VAVKVLSVESKQGEKE 84
YN+ + N ++ +G G FG V + +D + VAVK+L + EKE
Sbjct: 27 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 86
Query: 85 -FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGW 143
MSE+ M+++ HEN+V L G C G +++ +Y L L K A
Sbjct: 87 ALMSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKAEADLDK 143
Query: 144 KARREIIM--------GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK 195
+ R + + + +G+A++ + + +HRD+ N+LL KI DFGL++
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
Query: 196 LFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
++ +I A + ++APE T +SDV+S+G+LL EI S
Sbjct: 201 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRL--QDGTI--VAVKVLSVE-SKQGE-KEFMSEVASMANVNVCHENLV 103
+GEG FGSV +G L +DGT VAVK + ++ S Q E +EF+SE A M + + H N++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS--HPNVI 99
Query: 104 KLHGGCIDG-----PCRILVYDYMPNNSLSQTLLGE--EKRRAKFGWKARREIIMGIGRG 156
+L G CI+ P +++ +M L LL E + + ++ I G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ Y+ + +HRD+ N +L + ++DFGLSK + R+A + ++
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
A E T KSDV++FGV + EI +
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 36/287 (12%)
Query: 49 KIGEGGFGSVYKGRLQD------GTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHEN 101
++G+G FG VY+G +D T VAVK ++ + E+ EF++E + M CH +
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT-CH-H 81
Query: 102 LVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGR 155
+V+L G G ++V + M + L ++L E + +E+I I
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-- 213
G+AY++ + VHR++ N ++ +F KI DFG+++ E T + G L
Sbjct: 142 GMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVR 197
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELM 273
++APE G T SD++SFGV+L EI S L ++ + ++++++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 274 NLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNGE 320
V Y + P+N R + +C Q +RP + ++ +
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 36/287 (12%)
Query: 49 KIGEGGFGSVYKGRLQD------GTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHEN 101
++G+G FG VY+G +D T VAVK ++ + E+ EF++E + M CH +
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT-CH-H 82
Query: 102 LVKLHGGCIDGPCRILVYDYMPNNSLS---QTLLGEEKRRAKFGWKARREIIM---GIGR 155
+V+L G G ++V + M + L ++L E + +E+I I
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG-- 213
G+AY++ + VHR++ N ++ +F KI DFG+++ E T + G L
Sbjct: 143 GMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVR 198
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELM 273
++APE G T SD++SFGV+L EI S L ++ + ++++++
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 243
Query: 274 NLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNGE 320
V Y + P+N R + +C Q +RP + ++ +
Sbjct: 244 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 23/229 (10%)
Query: 32 FSYNQ-LKIATNGFRWSNKIGEGGFGSVYKGRL-----QDGTI-VAVKVLSVESKQGEKE 84
YN+ + N ++ +G G FG V + +D + VAVK+L + EKE
Sbjct: 35 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 85 -FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGW 143
MSE+ M+++ HEN+V L G C G +++ +Y L L K A
Sbjct: 95 ALMSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKAEADLDK 151
Query: 144 KARREIIM--------GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK 195
+ R + + + +G+A++ + + +HRD+ N+LL KI DFGL++
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
Query: 196 LFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
++ +I A + ++APE T +SDV+S+G+LL EI S
Sbjct: 209 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 95
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ ++
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL 149
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + ++ H T + ++A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ DV D + + L+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQ--- 258
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 259 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 88
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L ++ + R
Sbjct: 89 NIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N +
Sbjct: 148 SCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDI-NNIDYYKKT 203
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKG-RLQDG----TIVAVKVLSVE-SKQGEKEFMSEVASMANVNVCHENLV 103
+G G FG+VYKG + DG VA+KVL S + KE + E MA V + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPY--VS 82
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+L G C+ + LV MP L + + R + G + M I +G++Y+ E+
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHV---RENRGRLGSQDLLNWCMQIAKGMSYL-ED 137
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAIS 222
++ +VHRD+ N+L+ + KI+DFGL++L + T + + + ++A E +
Sbjct: 138 VR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILR 195
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
R T +SDV+S+GV + E+++
Sbjct: 196 RRFTHQSDVWSYGVTVWELMT 216
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 93
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ ++
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL 147
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + ++ H T + ++A
Sbjct: 148 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ DV D + + L+
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQ--- 256
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 257 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 291
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 96
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ ++
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL 150
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + ++ H T + ++A
Sbjct: 151 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ DV D + + L+
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQ--- 259
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 260 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 100
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ ++
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL 154
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + ++ H T + ++A
Sbjct: 155 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ DV D + + L+
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRRLLQ--- 263
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 264 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 298
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 96
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ ++
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL 150
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + ++ H T + ++A
Sbjct: 151 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ R A + + + D + + L+
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYP----DVNTFDITVYLLQGRRLLQ--- 259
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 260 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 154
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ ++
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL 208
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + ++ H T + ++A
Sbjct: 209 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ R A + + + D + + L+
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYP----DVNTFDITVYLLQGRRLLQ--- 317
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 318 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 93
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L ++ + R
Sbjct: 94 NIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N +
Sbjct: 153 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKT 208
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 101
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L ++ + R
Sbjct: 102 NIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N +I+DFGL++ N +
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDI-NNIDYYKKT 216
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 90
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L ++ + R
Sbjct: 91 NIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N +
Sbjct: 150 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKT 205
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 38/282 (13%)
Query: 50 IGEGGFGSVYKGRLQDG----TIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
IG G FG VY G L D AVK L+ + GE +F++E M + + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLS 95
Query: 105 LHGGCIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAYI 160
L G C+ ++V YM + L + E +++I + + +G+ ++
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL 149
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE---NTTHISTRVAGTLGYLAP 217
+ VHRD+ N +LD+ F K++DFGL++ + ++ H T + ++A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
E + + T KSDV+SFGVLL E+++ R A + + + D + + L+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYP----DVNTFDITVYLLQGRRLLQ--- 258
Query: 278 PMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
PE +V L C K+++RP S + ++
Sbjct: 259 -------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 147
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L ++ + R
Sbjct: 148 NIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N +
Sbjct: 207 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKT 262
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 101
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L ++ + R
Sbjct: 102 NIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDXXKKT 216
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 101
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V Y +L + L ++ + R
Sbjct: 102 NIINLLGACTQDGPLYVIVA-YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N +
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKT 216
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 36/294 (12%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK 83
+ + ++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+
Sbjct: 13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTL------LGEEK 136
EF++E + M N CH ++V+L G G +++ + M L L +
Sbjct: 73 IEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 137 RRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
A ++ I G+AY++ VHRD+ N ++ ++F KI DFG+++
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 197 FPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E T + G L +++PE G T SDV+SFGV+L EI +
Sbjct: 188 IYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 235
Query: 255 GEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
L ++ + ++++++ V + P+N ++ +C Q K+RP
Sbjct: 236 ----LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRP 285
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 134/294 (45%), Gaps = 36/294 (12%)
Query: 30 NAFSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEK 83
+ + ++ ++A S ++G+G FG VY+G + + T VA+K ++ + E+
Sbjct: 3 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 84 -EFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTL------LGEEK 136
EF++E + M N CH ++V+L G G +++ + M L L +
Sbjct: 63 IEFLNEASVMKEFN-CH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 137 RRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
A ++ I G+AY++ VHRD+ N ++ ++F KI DFG+++
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 197 FPENTTHISTRVAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E T + G L +++PE G T SDV+SFGV+L EI +
Sbjct: 178 IYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------- 225
Query: 255 GEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
L ++ + ++++++ V + P+N ++ +C Q K+RP
Sbjct: 226 ----LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRP 275
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 50 IGEGGFGSV---YKGRLQDGT--IVAVKVLSVES-KQGEKEFMSEVASMANVNVCHENLV 103
+GEG FG V DGT +VAVK L Q + E+ + + HE++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY--HEHIV 73
Query: 104 KLHGGCID-GPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
K G C D G + LV +Y+P SL L R G I G+AY+H
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEY 219
+ H +HR + N+LLD + KI DFGL+K PE + R G + + APE
Sbjct: 129 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 220 AISGRLTRKSDVYSFGVLLLEIVS 243
+ SDV+SFGV L E+++
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 50 IGEGGFGSV---YKGRLQDGT--IVAVKVLSVES-KQGEKEFMSEVASMANVNVCHENLV 103
+GEG FG V DGT +VAVK L Q + E+ + + HE++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY--HEHIV 74
Query: 104 KLHGGCID-GPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
K G C D G + LV +Y+P SL L R G I G+AY+H
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEY 219
+ H +HR + N+LLD + KI DFGL+K PE + R G + + APE
Sbjct: 130 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 220 AISGRLTRKSDVYSFGVLLLEIVS 243
+ SDV+SFGV L E+++
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCH 99
F + IG+G FG V R + + AVKVL ++ K+ EK MSE + NV H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK-NVKH 98
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
LV LH V DY+ L L +R F R I L Y
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLEPRARFYAAEIASALGY 154
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST--RVAGTLGYLAP 217
+H ++V+RD+K NILLD + ++DFGL K EN H ST GT YLAP
Sbjct: 155 LHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAP 208
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSG 244
E R D + G +L E++ G
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 25/248 (10%)
Query: 17 ENTIGGEQILKNINAFSYNQ-LKIATNGFRWSNKIGEGGFGSVYKGRL-----QDGTI-V 69
E+ G + YN+ + N ++ +G G FG V + +D + V
Sbjct: 20 ESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKV 79
Query: 70 AVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLS 128
AVK+L + EKE MSE+ M+++ HEN+V L G C G +++ +Y L
Sbjct: 80 AVKMLKSTAHADEKEALMSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 129 QTLLGEEKRRAKFGWK---------ARREIIM---GIGRGLAYIHEEIQPHVVHRDIKTS 176
L + ++ + + R+++ + +G+A++ + + +HRD+
Sbjct: 139 NFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 195
Query: 177 NILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFG 235
N+LL KI DFGL++ ++ +I A + ++APE T +SDV+S+G
Sbjct: 196 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 255
Query: 236 VLLLEIVS 243
+LL EI S
Sbjct: 256 ILLWEIFS 263
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 101
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V Y +L + L ++ + R
Sbjct: 102 NIINLLGACTQDGPLYVIV-GYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N +
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKT 216
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 26/236 (11%)
Query: 29 INAFSYNQLK-IATNGFRWSNKIGEGGFGSVYKGRL------QDGTIVAVKVLSVESKQG 81
IN +LK I+ + R+ ++GE FG VYKG L + VA+K L +++
Sbjct: 12 INQHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP 71
Query: 82 -EKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLL-------- 132
+EF E +M + H N+V L G +++ Y + L + L+
Sbjct: 72 LREEFRHE--AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV 129
Query: 133 --GEEKRRAKFGWKARR--EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
++ R K + ++ I G+ Y+ HVVH+D+ T N+L+ N KI
Sbjct: 130 GSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI 186
Query: 189 SDFGLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
SD GL + ++ + + + ++APE + G+ + SD++S+GV+L E+ S
Sbjct: 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 23/229 (10%)
Query: 34 YNQ-LKIATNGFRWSNKIGEGGFGSVYKGRL-----QDGTI-VAVKVLSVESKQGEKE-F 85
YN+ + N ++ +G G FG V + +D + VAVK+L + EKE
Sbjct: 37 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 96
Query: 86 MSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL-------SQTLLGEEKRR 138
MSE+ M+++ HEN+V L G C G +++ +Y L S+ L +
Sbjct: 97 MSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 139 AKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK 195
+ R+++ + +G+A++ + + +HRD+ N+LL KI DFGL++
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 196 LFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
++ +I A + ++APE T +SDV+S+G+LL EI S
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 49 KIGEGGFGSVYKG--RLQDGTI-VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVK 104
++G G FGSV +G R++ I VA+KVL +++ + +E M E M ++ + +V+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD--NPYIVR 400
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G C +LV + L + L+G +R + E++ + G+ Y+ E+
Sbjct: 401 LIGVC-QAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEK- 455
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAIS 222
+ VHR++ N+LL KISDFGLSK + ++ + R AG L + APE
Sbjct: 456 --NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 513
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
+ + +SDV+S+GV + E +S
Sbjct: 514 RKFSSRSDVWSYGVTMWEALS 534
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 37/231 (16%)
Query: 51 GEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGCI 110
G FG V+K +L + VAVK+ ++ KQ + SE + + HENL++
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQS---WQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 111 DGPCR----ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI-- 164
G L+ + SL+ L G W + + RGL+Y+HE++
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 165 ------QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF----PENTTHISTRVAGTLGY 214
+P + HRD K+ N+LL + ++DFGL+ F P TH GT Y
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRY 191
Query: 215 LAPEYAISGRLTRKS------DVYSFGVLLLEIVSGRTAVDFDVQLGEYHL 259
+APE + G + + D+Y+ G++L E+VS A D V EY L
Sbjct: 192 MAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD--EYML 239
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 38/325 (11%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKE--FMSEVASMANVNVCHENLVKLH 106
+G+G FG V K + + AVKV++ S + + + EV + ++ H N++KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLF 87
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
D +V + L ++ +R +F II + G+ Y+H+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKH--- 140
Query: 167 HVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
++VHRD+K NILL +++ + KI DFGLS F +N T + R+ GT Y+APE + G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRG 197
Query: 224 RLTRKSDVYSFGVLLLEIVSGRTAV----DFD----VQLGEYHLVDKAWGMYNSKELMNL 275
K DV+S GV+L ++SG ++D V+ G+Y W S + +L
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI-SDDAKDL 256
Query: 276 VDPMLYGNFPENEAIRFLKVGLL---CVQEKSKLRPQMSTAIKMMNGETNIDGXDVE--I 330
+ ML + ++R L +Q+ S P +S + + TNI E +
Sbjct: 257 IRKMLTF----HPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKL 312
Query: 331 SQPGLIGDIMDVKVGQRSSSKSMTE 355
+Q L+ M K+ +K +TE
Sbjct: 313 AQAALL--YMASKLTTLDETKQLTE 335
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQDGT----IVAVKVLS---VESKQGEKEFMSEVAS 91
I R K+G+G FG V +G + VAVK L + + +F+ EV +
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M +++ H NL++L+G + P + +V + P SL L K + F +
Sbjct: 75 MHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAV 128
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVA 209
+ G+ Y+ + +HRD+ N+LL KI DFGL + P+N H +
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 210 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ APE + + SD + FGV L E+ +
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQDGT----IVAVKVLS---VESKQGEKEFMSEVAS 91
I R K+G+G FG V +G + VAVK L + + +F+ EV +
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M +++ H NL++L+G + P + +V + P SL L K + F +
Sbjct: 69 MHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAV 122
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVA 209
+ G+ Y+ + +HRD+ N+LL KI DFGL + P+N H +
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 210 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ APE + + SD + FGV L E+ +
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQDGT----IVAVKVLS---VESKQGEKEFMSEVAS 91
I R K+G+G FG V +G + VAVK L + + +F+ EV +
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M +++ H NL++L+G + P + +V + P SL L K + F +
Sbjct: 65 MHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAV 118
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVA 209
+ G+ Y+ + +HRD+ N+LL KI DFGL + P+N H +
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 210 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ APE + + SD + FGV L E+ +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQDGT----IVAVKVLS---VESKQGEKEFMSEVAS 91
I R K+G+G FG V +G + VAVK L + + +F+ EV +
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M +++ H NL++L+G + P + +V + P SL L K + F +
Sbjct: 75 MHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAV 128
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVA 209
+ G+ Y+ + +HRD+ N+LL KI DFGL + P+N H +
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 210 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ APE + + SD + FGV L E+ +
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQDGT----IVAVKVLS---VESKQGEKEFMSEVAS 91
I R K+G+G FG V +G + VAVK L + + +F+ EV +
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M +++ H NL++L+G + P + +V + P SL L K + F +
Sbjct: 65 MHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAV 118
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVA 209
+ G+ Y+ + +HRD+ N+LL KI DFGL + P+N H +
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 210 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ APE + + SD + FGV L E+ +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 24/240 (10%)
Query: 19 TIGGEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVE 77
++ + ++++ + L+ F +G G +G VYKGR ++ G + A+KV+ V
Sbjct: 1 SMASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT 60
Query: 78 SKQGEKEFMSEVASMANVNVCHENLVKLHGGCID-GPCRI-----LVYDYMPNNSLSQTL 131
+ E+E E+ +M H N+ +G I P + LV ++ S++ +
Sbjct: 61 GDE-EEEIKQEI-NMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI 118
Query: 132 LGEEKRRAKFGWKAR--REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKIS 189
+ K W A REI+ RGL+++H Q V+HRDIK N+LL +N K+
Sbjct: 119 KNTKGNTLKEEWIAYICREIL----RGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLV 171
Query: 190 DFGLSKLFPENTTHISTRVAGTLGYLAPEYAI-----SGRLTRKSDVYSFGVLLLEIVSG 244
DFG+S +T + GT ++APE KSD++S G+ +E+ G
Sbjct: 172 DFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQDGT----IVAVKVLS---VESKQGEKEFMSEVAS 91
I R K+G+G FG V +G + VAVK L + + +F+ EV +
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M +++ H NL++L+G + P + +V + P SL L K + F +
Sbjct: 65 MHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAV 118
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVA 209
+ G+ Y+ + +HRD+ N+LL KI DFGL + P+N H +
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 210 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ APE + + SD + FGV L E+ +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 23/229 (10%)
Query: 34 YNQ-LKIATNGFRWSNKIGEGGFGSVYKGRL-----QDGTI-VAVKVLSVESKQGEKE-F 85
YN+ + N ++ +G G FG V + +D + VAVK+L + EKE
Sbjct: 37 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 96
Query: 86 MSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL-------SQTLLGEEKRR 138
MSE+ M+++ HEN+V L G C G +++ +Y L S+ L +
Sbjct: 97 MSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 139 AKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK 195
+ R+++ + +G+A++ + + +HRD+ N+LL KI DFGL++
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 196 LFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
++ +I A + ++APE T +SDV+S+G+LL EI S
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQDGT----IVAVKVLS---VESKQGEKEFMSEVAS 91
I R K+G+G FG V +G + VAVK L + + +F+ EV +
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
M +++ H NL++L+G + P + +V + P SL L K + F +
Sbjct: 69 MHSLD--HRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRL---RKHQGHFLLGTLSRYAV 122
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVA 209
+ G+ Y+ + +HRD+ N+LL KI DFGL + P+N H +
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 210 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ APE + + SD + FGV L E+ +
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 50 IGEGGFGSVYKGRLQD-----GTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLV 103
+GEG FG V R G VAVK L ES + E+ + N+ HEN+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY--HENIV 74
Query: 104 KLHGGCI-DGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
K G C DG I L+ +++P+ SL + L K + K K + + + I +G+ Y+
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF---PENTTHISTRVAGTLGYLAPE 218
VHRD+ N+L++ KI DFGL+K E T R + Y APE
Sbjct: 132 SR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APE 187
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVS 243
+ + SDV+SFGV L E+++
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 50 IGEGGFGSVYKGRLQD-----GTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLV 103
+GEG FG V R G VAVK L ES + E+ + N+ HEN+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY--HENIV 86
Query: 104 KLHGGCI-DGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
K G C DG I L+ +++P+ SL + L K + K K + + + I +G+ Y+
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF---PENTTHISTRVAGTLGYLAPE 218
VHRD+ N+L++ KI DFGL+K E T R + Y APE
Sbjct: 144 SR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APE 199
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVS 243
+ + SDV+SFGV L E+++
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 36/221 (16%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + T VAVK+L ++ + + + +SE+ M + H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HK 94
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWK---------ARREII 150
N++ L G C DGP ++V +Y +L + L E ++ + + ++++
Sbjct: 95 NIINLLGACTQDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 151 ---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ + HI
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 206
Query: 208 VAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
T G ++APE T +SDV+SFGVLL EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVL--SVESKQGEKEFMSEVASMANV-NVCHENLVKL 105
+G G FG+V+KG + +G + + V +E K G + F + M + ++ H ++V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C G LV Y+P SL + + R G + + I +G+ Y+ E
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQIAKGMYYLEEH-- 134
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT-LGYLAPEYAISGR 224
+VHR++ N+LL +++DFG++ L P + + A T + ++A E G+
Sbjct: 135 -GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 225 LTRKSDVYSFGVLLLEIVS 243
T +SDV+S+GV + E+++
Sbjct: 194 YTHQSDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVL--SVESKQGEKEFMSEVASMANV-NVCHENLVKL 105
+G G FG+V+KG + +G + + V +E K G + F + M + ++ H ++V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C G LV Y+P SL + + R G + + I +G+ Y+ E
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQIAKGMYYLEEH-- 152
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT-LGYLAPEYAISGR 224
+VHR++ N+LL +++DFG++ L P + + A T + ++A E G+
Sbjct: 153 -GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 225 LTRKSDVYSFGVLLLEIVS 243
T +SDV+S+GV + E+++
Sbjct: 212 YTHQSDVWSYGVTVWELMT 230
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 25/226 (11%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRL------QDGTIVAVKVLSVESKQG-EKEFMSEVA 90
+I+ + R+ ++GE FG VYKG L + VA+K L +++ +EF E
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE-- 62
Query: 91 SMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLL----------GEEKRRAK 140
+M + H N+V L G +++ Y + L + L+ ++ R K
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 141 FGWKARR--EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LF 197
+ ++ I G+ Y+ HVVH+D+ T N+L+ N KISD GL + ++
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVY 179
Query: 198 PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ + + ++APE + G+ + SD++S+GV+L E+ S
Sbjct: 180 AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + ++ VAVK+L ++ + + + +SE+ M + H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK-HK 101
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR------------ 147
N++ L G C DGP ++V +Y +L + L + + R
Sbjct: 102 NIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ N
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDXXKKT 216
Query: 208 VAGTLG--YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
G L ++APE T +SDV+SFGVL+ EI +
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYKGRLQD-GTIVAVKVLS---VESKQGEKEFMSEVASM 92
+ + N F IG GGFG VY R D G + A+K L ++ KQGE ++E +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 93 ANVNVCHENLVKLHGGCIDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
+ V+ + P ++ + D M L L + F R
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAA 299
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I GL ++H VV+RD+K +NILLD++ + +ISD GL+ F + H S GT
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 212 LGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
GY+APE G +D +S G +L +++ G +
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYKGRLQD-GTIVAVKVLS---VESKQGEKEFMSEVASM 92
+ + N F IG GGFG VY R D G + A+K L ++ KQGE ++E +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 93 ANVNVCHENLVKLHGGCIDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
+ V+ + P ++ + D M L L + F R
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAA 299
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I GL ++H VV+RD+K +NILLD++ + +ISD GL+ F + H S GT
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 212 LGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
GY+APE G +D +S G +L +++ G +
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYKGRLQD-GTIVAVKVLS---VESKQGEKEFMSEVASM 92
+ + N F IG GGFG VY R D G + A+K L ++ KQGE ++E +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 93 ANVNVCHENLVKLHGGCIDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
+ V+ + P ++ + D M L L + F R
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAA 299
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I GL ++H VV+RD+K +NILLD++ + +ISD GL+ F + H S GT
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 212 LGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
GY+APE G +D +S G +L +++ G +
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYKGRLQD-GTIVAVKVLS---VESKQGEKEFMSEVASM 92
+ + N F IG GGFG VY R D G + A+K L ++ KQGE ++E +
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 93 ANVNVCHENLVKLHGGCIDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
+ V+ + P ++ + D M L L + F R
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAA 298
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I GL ++H VV+RD+K +NILLD++ + +ISD GL+ F + H S GT
Sbjct: 299 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 352
Query: 212 LGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
GY+APE G +D +S G +L +++ G +
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 388
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + T VAVK+L ++ + + + +SE+ M + H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HK 94
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWK---------ARREII 150
N++ L G C DGP ++V +Y +L + L +F + + ++++
Sbjct: 95 NIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 151 ---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ + HI
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXX 206
Query: 208 VAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
T G ++APE T +SDV+SFGVLL EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 25/217 (11%)
Query: 50 IGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG 108
+G+G FG K + G ++ +K L ++ ++ F+ EV M + H N++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE--HPNVLKFIGV 75
Query: 109 CIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 168
+ +Y+ +L + + +++ W R I G+AY+H ++
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLHSM---NI 129
Query: 169 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS-------------TRVAGTLGYL 215
+HRD+ + N L+ +N N ++DFGL++L + T V G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 216 APEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFD 251
APE I+GR K DV+SFG++L EI+ GR D D
Sbjct: 190 APE-MINGRSYDEKVDVFSFGIVLCEII-GRVNADPD 224
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 10/204 (4%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVK---VLSVESKQGEKEFMSEVASMANVNVCH 99
FR KIG G F VY+ L DG VA+K + + + + + E+ + +N H
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN--H 91
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
N++K + I+ +V + LS+ + +K++ + + + + L +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY 219
+H V+HRDIK +N+ + K+ D GL + F TT + V GT Y++PE
Sbjct: 152 MHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPER 207
Query: 220 AISGRLTRKSDVYSFGVLLLEIVS 243
KSD++S G LL E+ +
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
K+GEG +G VYK + G IVA+K L E + + E++ + ++ H N+V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH--HPNIVSLI 85
Query: 107 GGCIDGPCRILVYDYMPNN---SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
C LV+++M + L + G + + K + + RG+A+ H
Sbjct: 86 DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-------YLYQLLRGVAHCH-- 136
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI-S 222
Q ++HRD+K N+L++ + K++DFGL++ F + V TL Y AP+ + S
Sbjct: 137 -QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGS 194
Query: 223 GRLTRKSDVYSFGVLLLEIVSGR 245
+ + D++S G + E+++G+
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
K+GEG +G VYK + G IVA+K L E + + E++ + ++ H N+V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH--HPNIVSLI 85
Query: 107 GGCIDGPCRILVYDYMPNN---SLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
C LV+++M + L + G + + K + + RG+A+ H
Sbjct: 86 DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-------YLYQLLRGVAHCH-- 136
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI-S 222
Q ++HRD+K N+L++ + K++DFGL++ F + V TL Y AP+ + S
Sbjct: 137 -QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGS 194
Query: 223 GRLTRKSDVYSFGVLLLEIVSGR 245
+ + D++S G + E+++G+
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMA 93
K + F +G+G FG+VY R Q+ I+A+KVL +E + E + E+ +
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
++ H N+++++ D L+ ++ P L + L ++ +F + + +
Sbjct: 71 HLR--HPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEEL 124
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
L Y HE V+HRDIK N+L+ KI+DFG S P + GTL
Sbjct: 125 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLD 178
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
YL PE K D++ GVL E + G D
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMA 93
K + F +G+G FG+VY R Q+ I+A+KVL +E + E + E+ +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
++ H N+++++ D L+ ++ P L + L ++ +F + + +
Sbjct: 70 HLR--HPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEEL 123
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
L Y HE V+HRDIK N+L+ KI+DFG S P + GTL
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLD 177
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
YL PE K D++ GVL E + G D
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 123/270 (45%), Gaps = 39/270 (14%)
Query: 48 NKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+IG+G +G V+ G+ + G VAVKV E + E V + HEN++
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIA 98
Query: 108 GCIDGPCR----ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
I G L+ DY N SL L + K+ ++ GL ++H E
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 164 I-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHI----STRVAGTLGY 214
I +P + HRD+K+ NIL+ +N I+D GL+ F +T + +TRV GT Y
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRY 212
Query: 215 LAPEYAISGRLTRK-------SDVYSFGVLLLEI----VSGRTAVDFDVQLGEYHLVDKA 263
+ PE + L R +D+YSFG++L E+ VSG ++ QL + LV
Sbjct: 213 MPPE-VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY--QLPYHDLVPSD 269
Query: 264 WGMYNSKELMNL--VDPMLYGNFPENEAIR 291
+ +E++ + + P + +E +R
Sbjct: 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLR 299
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
IG+G FG V G + G VAVK +++ + F++E + M + H NLV+L G
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLR--HSNLVQLLGVI 83
Query: 110 IDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 168
++ + +V +YM SL L + R+ G + + + + Y+ +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 169 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLT 226
VHRD+ N+L+ ++ K+SDFGL+K ST+ G L + APE + +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFS 192
Query: 227 RKSDVYSFGVLLLEIVS 243
KSDV+SFG+LL EI S
Sbjct: 193 TKSDVWSFGILLWEIYS 209
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 12 SRVSAENTIGG--EQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVY--KGRLQDGT 67
SR A T GG + + F + I ++ ++ +G+G FG V K ++ G
Sbjct: 17 SRGHAAGTSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQ 75
Query: 68 IVAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 124
AVKV+S V+ K ++ + EV + ++ H N++KL+ D LV +
Sbjct: 76 ECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 125 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 181
L ++ R +F II + G+ Y+H+ +VHRD+K N+LL+
Sbjct: 134 GELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 186
Query: 182 QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 241
++ N +I DFGLS F E + + ++ GT Y+APE + G K DV+S GV+L +
Sbjct: 187 KDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYIL 243
Query: 242 VSG 244
+SG
Sbjct: 244 LSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 23/243 (9%)
Query: 12 SRVSAENTIGG--EQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVY--KGRLQDGT 67
SR A T GG + + F + I ++ ++ +G+G FG V K ++ G
Sbjct: 18 SRGHAAGTSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQ 76
Query: 68 IVAVKVLS---VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPN 124
AVKV+S V+ K ++ + EV + ++ H N++KL+ D LV +
Sbjct: 77 ECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 125 NSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD--- 181
L ++ R +F II + G+ Y+H+ +VHRD+K N+LL+
Sbjct: 135 GELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 187
Query: 182 QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 241
++ N +I DFGLS F E + + ++ GT Y+APE + G K DV+S GV+L +
Sbjct: 188 KDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYIL 244
Query: 242 VSG 244
+SG
Sbjct: 245 LSG 247
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
IG+G FG V G + G VAVK +++ + F++E + M + H NLV+L G
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLR--HSNLVQLLGVI 68
Query: 110 IDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 168
++ + +V +YM SL L + R+ G + + + + Y+ +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 169 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLT 226
VHRD+ N+L+ ++ K+SDFGL+K ST+ G L + APE + +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 227 RKSDVYSFGVLLLEIVS 243
KSDV+SFG+LL EI S
Sbjct: 178 TKSDVWSFGILLWEIYS 194
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMA 93
K + F +G+G FG+VY R Q+ I+A+KVL +E + E + E+ +
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
++ H N+++++ D L+ ++ P L + L ++ +F + + +
Sbjct: 70 HLR--HPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEEL 123
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
L Y HE V+HRDIK N+L+ KI+DFG S P + GTL
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLD 177
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
YL PE K D++ GVL E + G D
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 139/307 (45%), Gaps = 36/307 (11%)
Query: 49 KIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
K+GEG +GSVYK + G IVA+K + VES +E + E++ M + H +VK +G
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPH--VVKYYG 91
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
+V +Y S+S + R I+ +GL Y+H +
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHFMRK-- 146
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR--VAGTLGYLAPEYAISGRL 225
+HRDIK NILL+ + K++DFG++ T ++ R V GT ++APE
Sbjct: 147 -IHRDIKAGNILLNTEGHAKLADFGVAGQL---TDXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 226 TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG-NF 284
+D++S G+ +E+ G+ + H + +A M + P L+ NF
Sbjct: 203 NCVADIWSLGITAIEMAEGKPP------YADIHPM-RAIFMIPTNPPPTFRKPELWSDNF 255
Query: 285 PENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNGETNIDGXDVEISQPGLIGDIMDVKV 344
+ F+K L+ E Q +TA +++ V I + LI + MDVK+
Sbjct: 256 TD-----FVKQCLVKSPE------QRATATQLLQHPFVRSAKGVSILR-DLINEAMDVKL 303
Query: 345 GQRSSSK 351
++ S +
Sbjct: 304 KRQESQQ 310
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
IG+G FG V G + G VAVK +++ + F++E + M + H NLV+L G
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLR--HSNLVQLLGVI 255
Query: 110 IDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 168
++ + +V +YM SL L + R+ G + + + + Y+ +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 169 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLT 226
VHRD+ N+L+ ++ K+SDFGL+K ST+ G L + APE + +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 227 RKSDVYSFGVLLLEIVS 243
KSDV+SFG+LL EI S
Sbjct: 365 TKSDVWSFGILLWEIYS 381
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 42/245 (17%)
Query: 32 FSYNQ-LKIATNGFRWSNKIGEGGFGSVYKGRL-----QDGTI-VAVKVLSVESKQGEKE 84
YN+ + N ++ +G G FG V + +D + VAVK+L + EKE
Sbjct: 20 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 79
Query: 85 -FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSL-------SQTLLG--- 133
MSE+ M+++ HEN+V L G C G +++ +Y L ++ +LG
Sbjct: 80 ALMSELKIMSHLGQ-HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSL 138
Query: 134 -----------EEKRRAKFGWKARREIIM---GIGRGLAYIHEEIQPHVVHRDIKTSNIL 179
E+ R + R+++ + +G+A++ + + +HRD+ N+L
Sbjct: 139 APGQDPEGLDKEDGRPLEL-----RDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 190
Query: 180 LDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLL 238
L KI DFGL++ ++ +I A + ++APE T +SDV+S+G+LL
Sbjct: 191 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 250
Query: 239 LEIVS 243
EI S
Sbjct: 251 WEIFS 255
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGE--KEFMSEVASMANVNVCHENLVKLH 106
+G+G FG V K + + AVKV++ S + + + EV + ++ H N++KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLF 87
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
D +V + L ++ +R +F II + G+ Y+H+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKH--- 140
Query: 167 HVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
++VHRD+K NILL +++ + KI DFGLS F +NT + R+ GT Y+APE + G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRI-GTAYYIAPE-VLRG 197
Query: 224 RLTRKSDVYSFGVLLLEIVSG 244
K DV+S GV+L ++SG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGE--KEFMSEVASMANVNVCHENLVKLH 106
+G+G FG V K + + AVKV++ S + + + EV + ++ H N++KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLF 87
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
D +V + L ++ +R +F II + G+ Y+H+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKH--- 140
Query: 167 HVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
++VHRD+K NILL +++ + KI DFGLS F +NT + R+ GT Y+APE + G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRI-GTAYYIAPE-VLRG 197
Query: 224 RLTRKSDVYSFGVLLLEIVSG 244
K DV+S GV+L ++SG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQ----DGTIVAVKVLSVESKQGEKE-FMSEVA 90
Q IA + +GEG FG VY+G + VAVK + KE FMSE
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
Query: 91 SMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
M N++ H ++VKL G + P I++ Y P L L R K K ++
Sbjct: 66 IMKNLD--HPHIVKLIGIIEEEPTWIIMELY-PYGELGHYL-----ERNKNSLKVLTLVL 117
Query: 151 --MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 208
+ I + +AY+ E I + VHRDI NIL+ K+ DFGLS+ + + ++
Sbjct: 118 YSLQICKAMAYL-ESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 174
Query: 209 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ +++PE R T SDV+ F V + EI+S
Sbjct: 175 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQ----DGTIVAVKVLSVESKQGEKE-FMSEVA 90
Q IA + +GEG FG VY+G + VAVK + KE FMSE
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 61
Query: 91 SMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
M N++ H ++VKL G + P I++ Y P L L R K K ++
Sbjct: 62 IMKNLD--HPHIVKLIGIIEEEPTWIIMELY-PYGELGHYL-----ERNKNSLKVLTLVL 113
Query: 151 --MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 208
+ I + +AY+ E I + VHRDI NIL+ K+ DFGLS+ + + ++
Sbjct: 114 YSLQICKAMAYL-ESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 170
Query: 209 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ +++PE R T SDV+ F V + EI+S
Sbjct: 171 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 18/215 (8%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQ----DGTIVAVKVLSVESKQGEKE-FMSEVA 90
Q IA + +GEG FG VY+G + VAVK + KE FMSE
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 91 SMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
M N++ H ++VKL G + P I++ Y P L L R K K ++
Sbjct: 78 IMKNLD--HPHIVKLIGIIEEEPTWIIMELY-PYGELGHYL-----ERNKNSLKVLTLVL 129
Query: 151 --MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 208
+ I + +AY+ E I + VHRDI NIL+ K+ DFGLS+ + + ++
Sbjct: 130 YSLQICKAMAYL-ESI--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 186
Query: 209 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ +++PE R T SDV+ F V + EI+S
Sbjct: 187 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVN 96
++ + +G GG V+ R L+D VAVKVL + + F E + A +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 97 VCHENLVKLH----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
H +V ++ GP +V +Y+ +L + E K E+I
Sbjct: 71 --HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIAD 124
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAG 210
+ L + H Q ++HRD+K +NIL+ K+ DFG+++ + N+ + V G
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
T YL+PE A + +SDVYS G +L E+++G
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 19/197 (9%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
IG+G FG V G + G VAVK +++ + F++E + M + H NLV+L G
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLR--HSNLVQLLGVI 74
Query: 110 IDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHV 168
++ + +V +YM SL L + R+ G + + + + Y+ +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 169 VHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL--GYLAPEYAISGRLT 226
VHRD+ N+L+ ++ K+SDFGL+K ST+ G L + APE +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREAAFS 183
Query: 227 RKSDVYSFGVLLLEIVS 243
KSDV+SFG+LL EI S
Sbjct: 184 TKSDVWSFGILLWEIYS 200
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + T VAVK+L ++ + + + +SE+ M + H+
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HK 87
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWK---------ARREII 150
N++ L G C DGP ++V +Y +L + L ++ + + ++++
Sbjct: 88 NIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 151 ---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ + HI
Sbjct: 147 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 199
Query: 208 VAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
T G ++APE T +SDV+SFGVLL EI +
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 50 IGEGGFGSV-YKGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHG 107
IG GGF V + G +VA+K++ + + +E+ ++ N+ H+++ +L+
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR--HQHICQLYH 75
Query: 108 GCIDGPCRILVYDYMPNNSL-----SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHE 162
+V +Y P L SQ L EE+ R F R+I+ + AY+H
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVF-----RQIVSAV----AYVHS 126
Query: 163 EIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAIS 222
+ HRD+K N+L D+ K+ DFGL N + G+L Y APE I
Sbjct: 127 Q---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPE-LIQ 182
Query: 223 GR--LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEY 257
G+ L ++DV+S G+LL ++ G D D + Y
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY 219
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + T VAVK+L ++ + + + +SE+ M + H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HK 94
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWK---------ARREII 150
N++ L G C DGP ++V +Y +L + L ++ + + ++++
Sbjct: 95 NIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 151 ---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ + HI
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 206
Query: 208 VAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
T G ++APE T +SDV+SFGVLL EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ +N H+N+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLN--HQNI 96
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ +N H+N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLN--HQNI 110
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + T VAVK+L ++ + + + +SE+ M + H+
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HK 135
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWK---------ARREII 150
N++ L G C DGP ++V +Y +L + L ++ + + ++++
Sbjct: 136 NIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 151 ---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ + HI
Sbjct: 195 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 247
Query: 208 VAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
T G ++APE T +SDV+SFGVLL EI +
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 21/221 (9%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVY--KGRLQDGTIVAVKVLS---VESKQGEKEFM 86
F + I ++ ++ +G+G FG V K ++ G AVKV+S V+ K ++ +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLL 74
Query: 87 SEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKAR 146
EV + ++ H N++KL+ D LV + L ++ R +F
Sbjct: 75 REVQLLKQLD--HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDA 128
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTH 203
II + G+ Y+H + +VHRD+K N+LL+ ++ N +I DFGLS F E +
Sbjct: 129 ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKK 184
Query: 204 ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
+ ++ GT Y+APE + G K DV+S GV+L ++SG
Sbjct: 185 MKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + T VAVK+L ++ + + + +SE+ M + H+
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HK 83
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWK---------ARREII 150
N++ L G C DGP ++V +Y +L + L ++ + + ++++
Sbjct: 84 NIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 151 ---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ + HI
Sbjct: 143 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 195
Query: 208 VAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
T G ++APE T +SDV+SFGVLL EI +
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + T VAVK+L ++ + + + +SE+ M + H+
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HK 86
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWK---------ARREII 150
N++ L G C DGP ++V +Y +L + L ++ + + ++++
Sbjct: 87 NIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 151 ---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ + HI
Sbjct: 146 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 198
Query: 208 VAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
T G ++APE T +SDV+SFGVLL EI +
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 42 NGFRWSNKIGEGGFGSVYKGRLQDGT-IVAVKVL---SVESKQGEKEFMSEVASMANVNV 97
+ F +G+G FG+VY R + IVA+KVL +E + E + E+ A+++
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH- 81
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H N+++L+ D L+ +Y P L + L ++ F + I+ + L
Sbjct: 82 -HPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADAL 136
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
Y H + V+HRDIK N+LL KI+DFG S P + GTL YL P
Sbjct: 137 MYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR---RKTMCGTLDYLPP 190
Query: 218 EYAISGRL-TRKSDVYSFGVLLLEIVSG 244
E I GR+ K D++ GVL E++ G
Sbjct: 191 E-MIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFN--HQNI 110
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 48 NKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC-HENLVKL 105
+ +G G FG V G+ + G VAVK+L+ + + + N+ + H +++KL
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 106 HGGCIDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+ I P I +V +Y+ L + + + K R + I G+ Y H +
Sbjct: 82 YQ-VISTPSDIFMVMEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
VVHRD+K N+LLD + N KI+DFGLS + + G+ Y APE ISGR
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRXSCGSPNYAAPE-VISGR 190
Query: 225 LTR--KSDVYSFGVLLLEIVSGRTAVDFD 251
L + D++S GV+L ++ G D D
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 42 NGFRWSNKIGEGGFGSVYKGRLQDGTI---VAVKVL-SVESKQGEKEFMSEVASMANVNV 97
N ++ + IGEG FG V K R++ + A+K + SK ++F E+ + +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE------------KRRAKFGWKA 145
H N++ L G C L +Y P+ +L L + +
Sbjct: 85 -HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 146 RREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS 205
+ RG+ Y+ Q +HRD+ NIL+ +N+ KI+DFGLS+
Sbjct: 144 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQE 193
Query: 206 TRVAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
V T+G ++A E T SDV+S+GVLL EIVS
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 112
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 173 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 95
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 96
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 95
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 42 NGFRWSNKIGEGGFGSVYKGRLQDGTI---VAVKVL-SVESKQGEKEFMSEVASMANVNV 97
N ++ + IGEG FG V K R++ + A+K + SK ++F E+ + +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE------------KRRAKFGWKA 145
H N++ L G C L +Y P+ +L L + +
Sbjct: 75 -HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 146 RREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS 205
+ RG+ Y+ Q +HRD+ NIL+ +N+ KI+DFGLS+
Sbjct: 134 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQE 183
Query: 206 TRVAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
V T+G ++A E T SDV+S+GVLL EIVS
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + T VAVK+L ++ + + + +SE+ M + H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HK 94
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWK---------ARREII 150
N++ L G C DGP ++V +Y +L + L ++ + + ++++
Sbjct: 95 NIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 151 ---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ + HI
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 206
Query: 208 VAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
T G ++APE T +SDV+SFGVLL EI +
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 87
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 148 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 50 IGEGGFGSVY--------KGRLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHE 100
+GEG FG V K + T VAVK+L ++ + + + +SE+ M + H+
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK-HK 79
Query: 101 NLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWK---------ARREII 150
N++ L G C DGP ++V +Y +L + L ++ + + ++++
Sbjct: 80 NIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 151 ---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ RG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ + HI
Sbjct: 139 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYY 191
Query: 208 VAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
T G ++APE T +SDV+SFGVLL EI +
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 102
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 163 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 110
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM---GIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVN 96
++ + +G GG V+ R L+D VAVKVL + + F E + A +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 97 VCHENLVKLH----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
H +V ++ GP +V +Y+ +L + E K E+I
Sbjct: 71 --HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIAD 124
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAG 210
+ L + H Q ++HRD+K +NI++ K+ DFG+++ + N+ + V G
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
T YL+PE A + +SDVYS G +L E+++G
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 19/220 (8%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLS---VESKQGEKEFMS 87
F + I ++ ++ +G+G FG V + + G AVKV+S V+ K ++ +
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 81
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
EV + ++ H N++KL+ D LV + L ++ R +F
Sbjct: 82 EVQLLKQLD--HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAA 135
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHI 204
II + G+ Y+H+ +VHRD+K N+LL+ ++ N +I DFGLS F E + +
Sbjct: 136 RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKM 191
Query: 205 STRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
++ GT Y+APE + G K DV+S GV+L ++SG
Sbjct: 192 KDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 122
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 183 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVN 96
++ + +G GG V+ R L+D VAVKVL + + F E + A +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 97 VCHENLVKLH----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
H +V ++ GP +V +Y+ +L + E K E+I
Sbjct: 71 --HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIAD 124
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAG 210
+ L + H Q ++HRD+K +NI++ K+ DFG+++ + N+ + V G
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
T YL+PE A + +SDVYS G +L E+++G
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 96
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYL 215
+ E H +HRDI N LL KI DFG+++ + + A + ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 24/227 (10%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG 108
+G+G +G VY GR L + +A+K + + + E+A ++ H+N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK--HKNIVQYLGS 87
Query: 109 CIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG-----IGRGLAYIHEE 163
+ + + +P SLS L R+K+G E +G I GL Y+H+
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALL------RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 164 IQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAIS 222
+VHRDIK N+L++ KISDFG SK + GTL Y+APE
Sbjct: 142 ---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDK 197
Query: 223 GR--LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMY 267
G + +D++S G ++E+ +G+ +LGE GM+
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPPF---YELGEPQAAMFKVGMF 241
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 48 NKIGEGGFGSVYKGRLQ-DGTIVAVK-VLSVESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG V+ GRL+ D T+VAVK + +F+ E + + H N+V+L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--HPNIVRL 177
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C +V + + T L E R + K +++ G+ Y+ +
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFL-TFLRTEGARLRV--KTLLQMVGDAAAGMEYLESKC- 233
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG----TLGYLAPEYAI 221
+HRD+ N L+ + KISDFG+S+ E + G + + APE
Sbjct: 234 --CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 222 SGRLTRKSDVYSFGVLLLEIVS 243
GR + +SDV+SFG+LL E S
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 75
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G + P V+ M +L + + R+ + + LAY+ +
Sbjct: 76 LIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK- 130
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
VHRDI N+L+ N K+ DFGLS+ ++T + +++ + ++APE R
Sbjct: 131 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 225 LTRKSDVYSFGVLLLEIV 242
T SDV+ FGV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHE 100
+R IG+G F V R + G VAVK++ + ++ EV M +N H
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILN--HP 74
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIGR 155
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV-- 127
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL 215
Y H Q ++VHRD+K N+LLD + N KI+DFG S F + G+ Y
Sbjct: 128 --QYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF--TVGNKLDTFCGSPPYA 180
Query: 216 APEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 249
APE + + DV+S GV+L +VSG D
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 136
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYL 215
+ E H +HRDI N LL KI DFG+++ ++ + ++
Sbjct: 197 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 50 IGEGGFGSVYKGRLQ------DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENL 102
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ N H+N+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNI 113
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---MGIGRGLAY 159
V+ G + R ++ + M L L R ++ A +++ I G Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYL 215
+ E H +HRDI N LL KI DFG+++ ++ + ++
Sbjct: 174 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVS 243
PE + G T K+D +SFGVLL EI S
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 24/203 (11%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 455
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEK---RRAKFGWKARREIIMG--IGRGLAY 159
L G + P I+ + LGE + + KF I+ + LAY
Sbjct: 456 LIGVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY 219
+ + VHRDI N+L+ N K+ DFGLS+ ++T + +++ + ++APE
Sbjct: 507 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 220 AISGRLTRKSDVYSFGVLLLEIV 242
R T SDV+ FGV + EI+
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 103
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G + P I+ M +L + + R+ + + LAY+ +
Sbjct: 104 LIGVITENPVWII----MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
VHRDI N+L+ N K+ DFGLS+ ++T + +++ + ++APE R
Sbjct: 159 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 216
Query: 225 LTRKSDVYSFGVLLLEIV 242
T SDV+ FGV + EI+
Sbjct: 217 FTSASDVWMFGVCMWEIL 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 49 KIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIGEG G V R + G VAVK++ + +Q + +EV M + H N+V+++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ--HFNVVEMYK 109
Query: 108 GCIDGPCRILVYDYMPNNSL----SQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+ G ++ +++ +L SQ L EE+ + + + LAY+H +
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT---------VCEAVLQALAYLHAQ 160
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEY 219
V+HRDIK+ +ILL + K+SDFG +SK P+ + GT ++APE
Sbjct: 161 ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX-----LVGTPYWMAPEV 212
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ D++S G++++E+V G
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 75
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G + P V+ M +L + + R+ + + LAY+ +
Sbjct: 76 LIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK- 130
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
VHRDI N+L+ N K+ DFGLS+ ++T + +++ + ++APE R
Sbjct: 131 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 225 LTRKSDVYSFGVLLLEIV 242
T SDV+ FGV + EI+
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 24/227 (10%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG 108
+G+G +G VY GR L + +A+K + + + E+A ++ H+N+V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK--HKNIVQYLGS 73
Query: 109 CIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG-----IGRGLAYIHEE 163
+ + + +P SLS L R+K+G E +G I GL Y+H+
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALL------RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 164 IQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAIS 222
+VHRDIK N+L++ KISDFG SK + GTL Y+APE
Sbjct: 128 ---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDK 183
Query: 223 GR--LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMY 267
G + +D++S G ++E+ +G+ +LGE GM+
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGKPPF---YELGEPQAAMFKVGMF 227
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 30/241 (12%)
Query: 48 NKIGEGGFG-SVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVK 104
KIGEG FG ++ +DG +K +++ S + +E EVA +AN+ H N+V+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK--HPNIVQ 87
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+ +V DY L + + ++ F + + I L ++H+
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQICLALKHVHDR- 144
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
++HRDIK+ NI L ++ ++ DFG++++ +T ++ GT YL+PE +
Sbjct: 145 --KILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPYYLSPEICENKP 201
Query: 225 LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYGNF 284
KSD+++ G +L E+ + + A + + + NLV ++ G+F
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHA-------------------FEAGSMKNLVLKIISGSF 242
Query: 285 P 285
P
Sbjct: 243 P 243
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLS---VESKQGEKEFMSEVASMANVNVCH 99
+R IG+G F V R + G VAVK++ + S +K F EV M +N H
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN--H 65
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIG 154
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF-----RQIVSAV- 119
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
Y H Q +VHRD+K N+LLD + N KI+DFG S F + T G+ Y
Sbjct: 120 ---QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPY 171
Query: 215 LAPEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 249
APE + + DV+S GV+L +VSG D
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 29/213 (13%)
Query: 49 KIGEGGFGSVYKGRLQDG-TIVAVKVL----------SVESKQGEK---EFMSEVASMAN 94
K+G G +G V + ++G + A+KV+ S ++K EK E +E++ + +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 95 VNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
++ H N++KL D LV ++ L + ++ R KF I+ I
Sbjct: 103 LD--HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQIL 156
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQN---FNPKISDFGLSKLFPENTTHISTRVAGT 211
G+ Y+H + ++VHRDIK NILL+ N KI DFGLS F ++ + R+ GT
Sbjct: 157 SGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL-GT 211
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
Y+APE + + K DV+S GV++ ++ G
Sbjct: 212 AYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 24/203 (11%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 75
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEK---RRAKFGWKARREIIMG--IGRGLAY 159
L G + P I+ + LGE + + KF I+ + LAY
Sbjct: 76 LIGVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY 219
+ + VHRDI N+L+ N K+ DFGLS+ ++T +++ + ++APE
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPES 183
Query: 220 AISGRLTRKSDVYSFGVLLLEIV 242
R T SDV+ FGV + EI+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 80
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G + P V+ M +L + + R+ + + LAY+ +
Sbjct: 81 LIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK- 135
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
VHRDI N+L+ N K+ DFGLS+ ++T + +++ + ++APE R
Sbjct: 136 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 225 LTRKSDVYSFGVLLLEIV 242
T SDV+ FGV + EI+
Sbjct: 194 FTSASDVWMFGVCMWEIL 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 72
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G + P V+ M +L + + R+ + + LAY+ +
Sbjct: 73 LIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK- 127
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
VHRDI N+L+ N K+ DFGLS+ ++T + +++ + ++APE R
Sbjct: 128 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 225 LTRKSDVYSFGVLLLEIV 242
T SDV+ FGV + EI+
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 48 NKIGEGGFGSVYKGRLQ-DGTIVAVK-VLSVESKQGEKEFMSEVASMANVNVCHENLVKL 105
+IG G FG V+ GRL+ D T+VAVK + +F+ E + + H N+V+L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--HPNIVRL 177
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C +V + + T L E R + K +++ G+ Y+ +
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFL-TFLRTEGARLRV--KTLLQMVGDAAAGMEYLESKC- 233
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG----TLGYLAPEYAI 221
+HRD+ N L+ + KISDFG+S+ E + G + + APE
Sbjct: 234 --CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 222 SGRLTRKSDVYSFGVLLLEIVS 243
GR + +SDV+SFG+LL E S
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 77
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G + P V+ M +L + + R+ + + LAY+ +
Sbjct: 78 LIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK- 132
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
VHRDI N+L+ N K+ DFGLS+ ++T + +++ + ++APE R
Sbjct: 133 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 225 LTRKSDVYSFGVLLLEIV 242
T SDV+ FGV + EI+
Sbjct: 191 FTSASDVWMFGVCMWEIL 208
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 33/211 (15%)
Query: 50 IGEGGFGSVYKG----RLQDGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVK 104
IG+G FG VY G + Q+ A+K LS + Q + F+ E M +N H N++
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN--HPNVLA 86
Query: 105 LHGGCI--DGPCRILVYDYMPNNSLSQTLLGEEKRRA-----KFGWKARREIIMGIGRGL 157
L G + +G +L+ YM + L Q + ++ FG + + RG+
Sbjct: 87 LIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFG--------LQVARGM 137
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN-----TTHISTRVAGTL 212
Y+ E+ VHRD+ N +LD++F K++DFGL++ + H R+ +
Sbjct: 138 EYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP--V 192
Query: 213 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ A E + R T KSDV+SFGVLL E+++
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 78
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L G + P V+ M +L + + R+ + + LAY+ +
Sbjct: 79 LIGVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK- 133
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
VHRDI N+L+ N K+ DFGLS+ ++T + +++ + ++APE R
Sbjct: 134 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 225 LTRKSDVYSFGVLLLEIV 242
T SDV+ FGV + EI+
Sbjct: 192 FTSASDVWMFGVCMWEIL 209
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 17/200 (8%)
Query: 49 KIGEGGFGSVYKG---RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLV-K 104
+IG+G FG V+KG R Q +VA+K++ +E + E E + + ++ ++ C + V K
Sbjct: 30 RIGKGSFGEVFKGIDNRTQQ--VVAIKIIDLEEAEDEIEDIQQEITV--LSQCDSSYVTK 85
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + G ++ +Y+ S L R F ++ I +GL Y+H E
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEILKGLDYLHSEK 140
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+ +HRDIK +N+LL + + K++DFG++ + +T V GT ++APE
Sbjct: 141 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSA 196
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
K+D++S G+ +E+ G
Sbjct: 197 YDSKADIWSLGITAIELAKG 216
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCH 99
+R IG+G F V R + G VAVK++ + S +K F EV M +N H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN--H 72
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIG 154
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV- 126
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
Y H Q +VHRD+K N+LLD + N KI+DFG S F + T G+ Y
Sbjct: 127 ---QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPY 178
Query: 215 LAPEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 249
APE + + DV+S GV+L +VSG D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLS---VESKQGEKEFMSEVASMANVNVCH 99
+R IG+G F V R + G VAVK++ + S +K F EV M +N H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN--H 72
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIG 154
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV- 126
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
Y H Q +VHRD+K N+LLD + N KI+DFG S F + T G+ Y
Sbjct: 127 ---QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPY 178
Query: 215 LAPEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 249
APE + + DV+S GV+L +VSG D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 41/262 (15%)
Query: 14 VSAENTIGGEQILKNINAFSYNQL-----KIATNGFRWSNKIGEGGFGSVYKGR----LQ 64
SA+ GGEQ+L + L K+ F +G G +G V+ R
Sbjct: 21 TSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHD 80
Query: 65 DGTIVAVKVL----------SVESKQGEKEFMSEVAS---MANVNVCHENLVKLHGGCID 111
G + A+KVL + E + E++ + + + ++ + KLH
Sbjct: 81 TGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH----- 135
Query: 112 GPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHR 171
L+ DY+ L L +R +F E+ + +G + + + +++R
Sbjct: 136 -----LILDYINGGELFTHL----SQRERF---TEHEVQIYVGEIVLALEHLHKLGIIYR 183
Query: 172 DIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR--LTRKS 229
DIK NILLD N + ++DFGLSK F + T + GT+ Y+AP+ G +
Sbjct: 184 DIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAV 243
Query: 230 DVYSFGVLLLEIVSGRTAVDFD 251
D +S GVL+ E+++G + D
Sbjct: 244 DWWSLGVLMYELLTGASPFTVD 265
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 62/293 (21%)
Query: 49 KIGEGGFGSVYKG-RLQDGTIVAVK-VLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+IG G +GSV K G I+AVK + S ++ +K+ + ++ + + C +V+ +
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC-PYIVQFY 87
Query: 107 GGCI-DGPCRILV----------YDYMP---NNSLSQTLLGEEKRRAKFGWKARREIIMG 152
G +G C I + Y Y+ ++ + + +LG+ I +
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGK--------------ITLA 133
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL 212
+ L ++ E ++ ++HRDIK SNILLD++ N K+ DFG+S ++ TR AG
Sbjct: 134 TVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA--KTRDAGCR 189
Query: 213 GYLAPEYAISGRLTR-----KSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMY 267
Y+APE I +R +SDV+S G+ L E+ +GR + +
Sbjct: 190 PYMAPE-RIDPSASRQGYDVRSDVWSLGITLYELATGRF----------------PYPKW 232
Query: 268 NS--KELMNLV--DPMLYGNFPENE-AIRFLKVGLLCVQEKSKLRPQMSTAIK 315
NS +L +V DP N E E + F+ LC+ + RP+ +K
Sbjct: 233 NSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIGEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYN 84
Query: 108 GCIDGPCRILVYDYMPNNSLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+ G +V +++ +L+ T + EE+ A + + + + L+ +H +
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ 135
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEY 219
V+HRDIK+ +ILL + K+SDFG +SK P + GT ++APE
Sbjct: 136 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPEL 187
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ D++S G++++E+V G
Sbjct: 188 ISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIGEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYN 95
Query: 108 GCIDGPCRILVYDYMPNNSLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+ G +V +++ +L+ T + EE+ A + + + + L+ +H +
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ 146
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEY 219
V+HRDIK+ +ILL + K+SDFG +SK P + GT ++APE
Sbjct: 147 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPEL 198
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ D++S G++++E+V G
Sbjct: 199 ISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIGEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYN 88
Query: 108 GCIDGPCRILVYDYMPNNSLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+ G +V +++ +L+ T + EE+ A + + + + L+ +H +
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ 139
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEY 219
V+HRDIK+ +ILL + K+SDFG +SK P + GT ++APE
Sbjct: 140 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPEL 191
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ D++S G++++E+V G
Sbjct: 192 ISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIGEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYN 93
Query: 108 GCIDGPCRILVYDYMPNNSLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+ G +V +++ +L+ T + EE+ A + + + + L+ +H +
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ 144
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEY 219
V+HRDIK+ +ILL + K+SDFG +SK P + GT ++APE
Sbjct: 145 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPEL 196
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ D++S G++++E+V G
Sbjct: 197 ISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 42 NGFRWSNKIGEGGFGSVYKGRLQDGTI---VAVKVL-SVESKQGEKEFMSEVASMANVNV 97
N ++ + IGEG FG V K R++ + A+K + SK ++F E+ + +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE------------KRRAKFGWKA 145
H N++ L G C L +Y P+ +L L + +
Sbjct: 82 -HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 146 RREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS 205
+ RG+ Y+ Q +HR++ NIL+ +N+ KI+DFGLS+
Sbjct: 141 LLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR-------GQE 190
Query: 206 TRVAGTLG-----YLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
V T+G ++A E T SDV+S+GVLL EIVS
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVES-KQGEKEFM-SEVASMANVNVCHENLVKLH 106
IG G +G K R + DG I+ K L S + EK+ + SEV + + H N+V+ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK--HPNIVRYY 71
Query: 107 GGCIDGPCRIL--VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
ID L V +Y L+ + K R + ++ + L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 165 Q--PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAIS 222
V+HRD+K +N+ LD N K+ DFGL+++ +T+ T V GT Y++PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNR 190
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
KSD++S G LL E+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCH 99
+R IG+G F V R + G VAVK++ + S +K F EV M +N H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN--H 72
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIG 154
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV- 126
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
Y H Q +VHRD+K N+LLD + N KI+DFG S F + G Y
Sbjct: 127 ---QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA--FCGAPPY 178
Query: 215 LAPEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 249
APE + + DV+S GV+L +VSG D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVL---SVESKQGEKEFMSEVASMANVNVCH 99
+R IG+G F V R + G VAV+++ + S +K F EV M +N H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLN--H 72
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIG 154
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV- 126
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
Y H Q +VHRD+K N+LLD + N KI+DFG S F + G+ Y
Sbjct: 127 ---QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDEFCGSPPY 178
Query: 215 LAPEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 249
APE + + DV+S GV+L +VSG D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 38/331 (11%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ----DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCH 99
++ K+G G +G V R + + I ++ SV + K + EVA + ++ H
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLD--H 95
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
N++KL+ D LV + L ++ R KF II + G+ Y
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEII----HRMKFNEVDAAVIIKQVLSGVTY 151
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+H+ ++VHRD+K N+LL+ KI DFGLS +F EN + R+ GT Y+A
Sbjct: 152 LHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTAYYIA 206
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMN-- 274
PE + + K DV+S GV+L +++G V+K ++S E N
Sbjct: 207 PE-VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVS 265
Query: 275 -----LVDPMLYGN----FPENEAIRFLKVGLLCVQEKSKLR-PQMSTAIKMMNGETNID 324
L+ ML + +A+ + +C +++S + P ++ AI+ M N
Sbjct: 266 EGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQN-- 323
Query: 325 GXDVEISQPGLIGDIMDVKVGQRSSSKSMTE 355
+++Q L+ M K+ + +K +T+
Sbjct: 324 --SQKLAQAALL--YMASKLTSQEETKELTD 350
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLS---VESKQGEKEFMSEVASMANVNVCH 99
+R IG+G F V R + G VAV+++ + S +K F EV M +N H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLN--H 72
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIG 154
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-----RQIVSAV- 126
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
Y H Q +VHRD+K N+LLD + N KI+DFG S F + T G+ Y
Sbjct: 127 ---QYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDT-FCGSPPY 178
Query: 215 LAPEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 249
APE + + DV+S GV+L +VSG D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANV--NVCHEN 101
F + K+G G FG V+ +++ + +V+ +K + M ++ + V ++ H N
Sbjct: 24 FIFKRKLGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 102 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
++K+ D +V + L + ++ + R E++ + LAY H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNP----KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ HVVH+D+K NIL Q+ +P KI DFGL++LF + ST AGT Y+AP
Sbjct: 142 SQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAP 195
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSG 244
E +T K D++S GV++ +++G
Sbjct: 196 E-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIGEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYN 138
Query: 108 GCIDGPCRILVYDYMPNNSLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+ G +V +++ +L+ T + EE+ A + + + + L+ +H +
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ 189
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEY 219
V+HRDIK+ +ILL + K+SDFG +SK P + GT ++APE
Sbjct: 190 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPEL 241
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ D++S G++++E+V G
Sbjct: 242 ISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 24/203 (11%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 75
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEK---RRAKFGWKARREIIMG--IGRGLAY 159
L G + P I+ + LGE + + KF I+ + LAY
Sbjct: 76 LIGVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY 219
+ + VHRDI N+L+ K+ DFGLS+ ++T + +++ + ++APE
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 220 AISGRLTRKSDVYSFGVLLLEIV 242
R T SDV+ FGV + EI+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIGEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYN 215
Query: 108 GCIDGPCRILVYDYMPNNSLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+ G +V +++ +L+ T + EE+ A + + + + L+ +H +
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---------VCLAVLQALSVLHAQ 266
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEY 219
V+HRDIK+ +ILL + K+SDFG +SK P + GT ++APE
Sbjct: 267 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX-----LVGTPYWMAPEL 318
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ D++S G++++E+V G
Sbjct: 319 ISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLH 106
+GEG +G V R+ + VAVK++ ++ E E+ A +N HEN+VK +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINAMLN--HENVVKFY 71
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
G +G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH-- 122
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAIS 222
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 223 GRL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 21/221 (9%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVY--KGRLQDGTIVAVKVLS---VESKQGEKEFM 86
F + I ++ ++ +G+G FG V K ++ G AVKV+S V+ K ++ +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLL 74
Query: 87 SEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKAR 146
EV + ++ H N+ KL+ D LV + L ++ R +F
Sbjct: 75 REVQLLKQLD--HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDA 128
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTH 203
II + G+ Y H + +VHRD+K N+LL+ ++ N +I DFGLS F E +
Sbjct: 129 ARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKK 184
Query: 204 ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
++ GT Y+APE + G K DV+S GV+L ++SG
Sbjct: 185 XKDKI-GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKGRLQDGT----IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKL 105
+G+G FG V+ + G+ + A+KVL + + +++ V V H +VKL
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
H L+ D++ L L + F + + + + L ++H
Sbjct: 93 HYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAELALALDHLH---S 145
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISG 223
+++RD+K NILLD+ + K++DFGLSK E+ H + GT+ Y+APE
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 224 RLTRKSDVYSFGVLLLEIVSG 244
T+ +D +SFGVL+ E+++G
Sbjct: 203 GHTQSADWWSFGVLMFEMLTG 223
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKGRLQDGT----IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKL 105
+G+G FG V+ + G+ + A+KVL + + +++ V V H +VKL
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
H L+ D++ L L + F + + + + L ++H
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISG 223
+++RD+K NILLD+ + K++DFGLSK E+ H + GT+ Y+APE
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 224 RLTRKSDVYSFGVLLLEIVSG 244
T+ +D +SFGVL+ E+++G
Sbjct: 202 GHTQSADWWSFGVLMFEMLTG 222
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V +E S + KE + E MA+V+
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 111 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 164
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 165 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 222 LESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 27/258 (10%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGE---KEFMSEVASMANVNVCHENLVKL 105
KIGEG +G VYK + G A+K + +E K+ E + E++ + + H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELK--HSNIVKL 65
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLL----GEEKRRAKFGWKARREIIMGIGRGLAYIH 161
+ +LV++++ + L + L G E AK ++ + G+AY H
Sbjct: 66 YDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-------SFLLQLLNGIAYCH 117
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 221
+ V+HRD+K N+L+++ KI+DFGL++ F + V TL Y AP+ +
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLM 173
Query: 222 -SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD-PM 279
S + + D++S G + E+V+G + + + + G NSK N+ + P
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 280 LYGNFPENEAI---RFLK 294
NF E + FLK
Sbjct: 234 YDPNFTVYEPLPWESFLK 251
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKGRLQDGT----IVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKL 105
+G+G FG V+ + G+ + A+KVL + + +++ V V H +VKL
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
H L+ D++ L L + F + + + + L ++H
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVAGTLGYLAPEYAISG 223
+++RD+K NILLD+ + K++DFGLSK E+ H + GT+ Y+APE
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 224 RLTRKSDVYSFGVLLLEIVSG 244
T+ +D +SFGVL+ E+++G
Sbjct: 202 GHTQSADWWSFGVLMFEMLTG 222
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQ---------GEKEFMSE 88
+ N FR +G+GGFG V +++ G + A K L + + EK+ + +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 89 VASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARRE 148
V S V++ + K D C LV M L + + G+ R
Sbjct: 241 VNSRFVVSLAYAYETK------DALC--LVLTLMNGGDLKFHIY----HMGQAGFPEARA 288
Query: 149 IIMG--IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 206
+ I GL +H E +V+RD+K NILLD + + +ISD GL+ PE T I
Sbjct: 289 VFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKG 344
Query: 207 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 246
RV GT+GY+APE + R T D ++ G LL E+++G++
Sbjct: 345 RV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+GEG +G V K R +D G IVA+K S + K +K M E+ + + HENLV L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR--HENLVNLL 90
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
C LV++++ + L L + K +II GIG + H
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG----FCHSH--- 143
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG-RL 225
+++HRDIK NIL+ Q+ K+ DFG ++ VA T Y APE + +
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRAPELLVGDVKY 202
Query: 226 TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGE-YHLV 260
+ DV++ G L+ E+ G D + + YH++
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 27/258 (10%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGE---KEFMSEVASMANVNVCHENLVKL 105
KIGEG +G VYK + G A+K + +E K+ E + E++ + + H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELK--HSNIVKL 65
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLL----GEEKRRAKFGWKARREIIMGIGRGLAYIH 161
+ +LV++++ + L + L G E AK ++ + G+AY H
Sbjct: 66 YDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-------SFLLQLLNGIAYCH 117
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 221
+ V+HRD+K N+L+++ KI+DFGL++ F + V TL Y AP+ +
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLM 173
Query: 222 -SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD-PM 279
S + + D++S G + E+V+G + + + + G NSK N+ + P
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 280 LYGNFPENEAI---RFLK 294
NF E + FLK
Sbjct: 234 YDPNFTVYEPLPWESFLK 251
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 48 NKIGEGGFGSVYKGR--LQDGTIVAVKVLSVESKQGEK-EFMSEVASMANVNVCHENLVK 104
+K+GEG + +VYKG+ L D +VA+K + +E ++G + EV+ + ++ H N+V
Sbjct: 8 DKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLK--HANIVT 64
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
LH LV++Y+ + L Q L + + + + RGLAY H +
Sbjct: 65 LHDIIHTEKSLTLVFEYL-DKDLKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCHRQ- 119
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI-SG 223
V+HRD+K N+L+++ K++DFGL++ T V TL Y P+ + S
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGST 176
Query: 224 RLTRKSDVYSFGVLLLEIVSGR 245
+ + D++ G + E+ +GR
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGR 198
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQ---------GEKEFMSE 88
+ N FR +G+GGFG V +++ G + A K L + + EK+ + +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 89 VASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARRE 148
V S V++ + K D C LV M L + + G+ R
Sbjct: 241 VNSRFVVSLAYAYETK------DALC--LVLTLMNGGDLKFHIY----HMGQAGFPEARA 288
Query: 149 IIMG--IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 206
+ I GL +H E +V+RD+K NILLD + + +ISD GL+ PE T I
Sbjct: 289 VFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKG 344
Query: 207 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 246
RV GT+GY+APE + R T D ++ G LL E+++G++
Sbjct: 345 RV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 115/232 (49%), Gaps = 18/232 (7%)
Query: 23 EQILKNINAFSYNQLKIAT---NGFRWSNKIGEGGFGSVYK-GRLQDGTIVAVKVLSVES 78
EQ K + AF + K+ + F +++G G G V+K G ++A K++ +E
Sbjct: 11 EQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI 70
Query: 79 KQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEK 136
K + + E+ + N + +V +G DG I + ++M SL Q L K
Sbjct: 71 KPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMDGGSLDQVL----K 123
Query: 137 RRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++ K+ DFG+S
Sbjct: 124 KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQ 181
Query: 197 FPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 248
++ ++ GT Y++PE + +SD++S G+ L+E+ GR +
Sbjct: 182 LIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 24/203 (11%)
Query: 50 IGEGGFGSVYKGRLQD----GTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVK 104
IGEG FG V++G VA+K + S ++F+ E +M + H ++VK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVK 455
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEK---RRAKFGWKARREIIMG--IGRGLAY 159
L G + P I+ + LGE + + KF I+ + LAY
Sbjct: 456 LIGVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY 219
+ + VHRDI N+L+ K+ DFGLS+ ++T + +++ + ++APE
Sbjct: 507 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 220 AISGRLTRKSDVYSFGVLLLEIV 242
R T SDV+ FGV + EI+
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 109/214 (50%), Gaps = 15/214 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQG-EKEFMSEVASMANV 95
++ + F +++G G G V K + + G I+A K++ +E K + + E+ +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 96 NVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
N + +V +G DG I + ++M SL Q L K + + ++ + +
Sbjct: 72 NSPY--IVGFYGAFYSDGEISICM-EHMDGGSLDQVL----KEAKRIPEEILGKVSIAVL 124
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
RGLAY+ E+ Q ++HRD+K SNIL++ K+ DFG+S ++ ++ GT Y
Sbjct: 125 RGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSY 179
Query: 215 LAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 248
+APE + +SD++S G+ L+E+ GR +
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 115/232 (49%), Gaps = 18/232 (7%)
Query: 23 EQILKNINAFSYNQLKIA---TNGFRWSNKIGEGGFGSVYK-GRLQDGTIVAVKVLSVES 78
EQ K + AF + K+ + F +++G G G V+K G ++A K++ +E
Sbjct: 46 EQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI 105
Query: 79 KQG-EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEK 136
K + + E+ + N + +V +G DG I + ++M SL Q L K
Sbjct: 106 KPAIRNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMDGGSLDQVL----K 158
Query: 137 RRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL 196
+ + + ++ + + +GL Y+ E+ + ++HRD+K SNIL++ K+ DFG+S
Sbjct: 159 KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQ 216
Query: 197 FPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 248
++ ++ GT Y++PE + +SD++S G+ L+E+ GR +
Sbjct: 217 LIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
IG+G FG V++G+ + G VAVK+ S + E+ + E V + HEN++ G
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GF 62
Query: 110 IDGPCR--------ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
I + LV DY + SL L R + ++ + GLA++H
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 117
Query: 162 EEI-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLG 213
EI +P + HRD+K+ NIL+ +N I+D GL+ T I GT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 214 YLAPEYAISG------RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 260
Y+APE +++D+Y+ G++ EI + + D QL Y LV
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
+G+G +G V++G Q G VAVK+ S + EK + E V + HEN++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIAS- 70
Query: 110 IDGPCR------ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
D R L+ Y SL L + + I++ I GLA++H E
Sbjct: 71 -DMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 164 I-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST----RVAGTLGY 214
I +P + HRD+K+ NIL+ +N I+D GL+ + ++T + RV GT Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRY 183
Query: 215 LAPEYAISGRLT------RKSDVYSFGVLLLEI 241
+APE ++ D+++FG++L E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
IG+G FG V++G+ + G VAVK+ S + E+ + E V + HEN++ G
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GF 63
Query: 110 IDGPCR--------ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
I + LV DY + SL L R + ++ + GLA++H
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 118
Query: 162 EEI-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLG 213
EI +P + HRD+K+ NIL+ +N I+D GL+ T I GT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 214 YLAPEYAISG------RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 260
Y+APE +++D+Y+ G++ EI + + D QL Y LV
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 233
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 27/258 (10%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGE---KEFMSEVASMANVNVCHENLVKL 105
KIGEG +G VYK + G A+K + +E K+ E + E++ + + H N+VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELK--HSNIVKL 65
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLL----GEEKRRAKFGWKARREIIMGIGRGLAYIH 161
+ +LV++++ + L + L G E AK ++ + G+AY H
Sbjct: 66 YDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-------SFLLQLLNGIAYCH 117
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 221
+ V+HRD+K N+L+++ KI+DFGL++ F + + TL Y AP+ +
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLM 173
Query: 222 -SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVD-PM 279
S + + D++S G + E+V+G + + + + G NSK N+ + P
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 280 LYGNFPENEAI---RFLK 294
NF E + FLK
Sbjct: 234 YDPNFTVYEPLPWESFLK 251
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
IG+G FG V++G+ + G VAVK+ S + E+ + E V + HEN++ G
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GF 88
Query: 110 IDGPCR--------ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
I + LV DY + SL L R + ++ + GLA++H
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 143
Query: 162 EEI-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLG 213
EI +P + HRD+K+ NIL+ +N I+D GL+ T I GT
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 214 YLAPEYAISG------RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 260
Y+APE +++D+Y+ G++ EI + + D QL Y LV
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 258
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHE 100
+R IG+G F V R + G VA+K++ + ++ EV M +N H
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN--HP 74
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL L+ +Y + L+ + + K R+I+ + Y
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV----QYC 130
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYL--APE 218
H Q +VHRD+K N+LLD + N KI+DFG S F V G L AP
Sbjct: 131 H---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT---------VGGKLDAFCGAPP 178
Query: 219 YAISGRLTRKS------DVYSFGVLLLEIVSGRTAVD 249
YA K DV+S GV+L +VSG D
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
IG+G FG V++G+ + G VAVK+ S + E+ + E V + HEN++ G
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GF 101
Query: 110 IDGPCR--------ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
I + LV DY + SL L R + ++ + GLA++H
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 156
Query: 162 EEI-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLG 213
EI +P + HRD+K+ NIL+ +N I+D GL+ T I GT
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 214 YLAPEYAISG------RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 260
Y+APE +++D+Y+ G++ EI + + D QL Y LV
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
+G+G +G V++G Q G VAVK+ S + EK + E V + HEN++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIAS- 70
Query: 110 IDGPCR------ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
D R L+ Y SL L + + I++ I GLA++H E
Sbjct: 71 -DMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 164 I-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST----RVAGTLGY 214
I +P + HRD+K+ NIL+ +N I+D GL+ + ++T + RV GT Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRY 183
Query: 215 LAPEYAISGRLT------RKSDVYSFGVLLLEI 241
+APE ++ D+++FG++L E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
IG+G FG V++G+ + G VAVK+ S + E+ + E V + HEN++ G
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GF 68
Query: 110 IDGPCR--------ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
I + LV DY + SL L R + ++ + GLA++H
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 123
Query: 162 EEI-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLG 213
EI +P + HRD+K+ NIL+ +N I+D GL+ T I GT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 214 YLAPEYAISG------RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 260
Y+APE +++D+Y+ G++ EI + + D QL Y LV
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 238
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
IG+G FG V++G+ + G VAVK+ S + E+ + E V + HEN++ G
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFS---SREERSWFREAEIYQTVMLRHENIL----GF 65
Query: 110 IDGPCR--------ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
I + LV DY + SL L R + ++ + GLA++H
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLH 120
Query: 162 EEI-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---TRVAGTLG 213
EI +P + HRD+K+ NIL+ +N I+D GL+ T I GT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 214 YLAPEYAISG------RLTRKSDVYSFGVLLLEIVSGRT--AVDFDVQLGEYHLV 260
Y+APE +++D+Y+ G++ EI + + D QL Y LV
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 235
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 80 PH--VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 133
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
+G+G +G V++G Q G VAVK+ S + EK + E V + HEN++
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIAS- 99
Query: 110 IDGPCR------ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
D R L+ Y SL L + + I++ I GLA++H E
Sbjct: 100 -DMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 164 I-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST----RVAGTLGY 214
I +P + HRD+K+ NIL+ +N I+D GL+ + ++T + RV GT Y
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRY 212
Query: 215 LAPEYAISGRLT------RKSDVYSFGVLLLEI 241
+APE ++ D+++FG++L E+
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 78 PH--VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 131
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 77 PH--VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 130
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 79 PH--VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 132
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 49 KIGEGGFGSV-YKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIGEG G V G VAVK + + +Q + +EV M + + H+N+V ++
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH--HDNVVDMYS 109
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
+ G +V +++ +L+ + + + + + R L+Y+H +
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQ---G 161
Query: 168 VVHRDIKTSNILLDQNFNPKISDFG----LSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
V+HRDIK+ +ILL + K+SDFG +SK P+ + GT ++APE
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKX-----LVGTPYWMAPEVISRL 216
Query: 224 RLTRKSDVYSFGVLLLEIVSG 244
+ D++S G++++E++ G
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDG 237
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 50 IGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEKE-FMSEVASMANVNVCHENL 102
+G G FG V + VAVK+L ++ E+E MSE+ M + HEN+
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG-SHENI 111
Query: 103 VKLHGGC-IDGPCRILVYDYMPNNSL-------------------SQTLLGEEKRRAKFG 142
V L G C + GP L+++Y L +Q L EE+
Sbjct: 112 VNLLGACTLSGPI-YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 143 WKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTT 202
++ + +G+ ++ + VHRD+ N+L+ KI DFGL++ ++
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 203 HISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
++ A + ++APE G T KSDV+S+G+LL EI S
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 78 PH--VCRLLGICLTSTVQ-LIMQLMPFGXLLDYV---REHKDNIGSQYLLNWCVQIAKGM 131
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 102 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 155
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 156 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 213 LESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 15/210 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHE 100
+R IG+G F V R + G VA+K++ + ++ EV M +N H
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN--HP 71
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL L+ +Y + L+ + + K R+I+ + Y
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV----QYC 127
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H Q +VHRD+K N+LLD + N KI+DFG S F + T G+ Y APE
Sbjct: 128 H---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-LDT-FCGSPPYAAPELF 182
Query: 221 ISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 249
+ + DV+S GV+L +VSG D
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 81 PH--VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 134
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 72
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 122
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 10/201 (4%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVES-KQGEKEFM-SEVASMANVNVCHENLVKLH 106
IG G +G K R + DG I+ K L S + EK+ + SEV + + H N+V+ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK--HPNIVRYY 71
Query: 107 GGCIDGPCRIL--VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
ID L V +Y L+ + K R + ++ + L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 165 Q--PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAIS 222
V+HRD+K +N+ LD N K+ DFGL+++ +T+ + GT Y++PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-FAKAFVGTPYYMSPEQMNR 190
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
KSD++S G LL E+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 80 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 133
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 19/201 (9%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAV-KVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G+G FG VYK + ++ +++A KV+ +S++ +++M E+ +A+ + H N+VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKLLD 101
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
++ ++ ++ +L E+ + + + L Y+H+
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV---VCKQTLDALNYLHDN---K 155
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVA--GTLGYLAPEYAISGR- 224
++HRD+K NIL + + K++DFG+S +NT I R + GT ++APE +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 225 ----LTRKSDVYSFGVLLLEI 241
K+DV+S G+ L+E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNVCHENLV 103
+G G FG+VYKG + +G V + V E S + KE + E MA+V+ H +
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH--VC 90
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+L G C+ + L+ MP L + + + G + + I +G+ Y+ +
Sbjct: 91 RLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR 146
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAIS 222
+VHRD+ N+L+ + KI+DFGL+KL E + + + ++A E +
Sbjct: 147 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
T +SDV+S+GV + E+++
Sbjct: 204 RIYTHQSDVWSYGVTVWELMT 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 84 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 137
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNVCHENLV 103
+G G FG+VYKG + +G V + V E S + KE + E MA+V+ H +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH--VC 80
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+L G C+ + L+ MP L + + + G + + I +G+ Y+ +
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAIS 222
+VHRD+ N+L+ + KI+DFGL+KL E + + + ++A E +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
T +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 79 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 132
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 80 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 133
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVY----KGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMA 93
K + F +G+G FG V+ R G + A+KVL + + +++
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
+V H +VKLH L+ D++ L L + F + + + +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAEL 139
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH--ISTRVAGT 211
GL ++H +++RD+K NILLD+ + K++DFGLSK E H + GT
Sbjct: 140 ALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGT 193
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
+ Y+APE + +D +S+GVL+ E+++G
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 77 PH--VCRLLGICLTSTVQ-LITQLMPFGXLLDYV---REHKDNIGSQYLLNWCVQIAKGM 130
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 72
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 122
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 77 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 130
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 83 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 136
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 137 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 194 LESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 50 IGEGGFGSV------YKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLV 103
+GEG FG V G+ I+ KVL+ QG E E++ + + H +++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR--HPHII 77
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
KL+ I+V +Y N + +R K + R I + Y H
Sbjct: 78 KLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
+VHRD+K N+LLD++ N KI+DFGLS + + ++ G+ Y APE ISG
Sbjct: 133 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISG 186
Query: 224 RLTR--KSDVYSFGVLLLEIVSGRTAVD 249
+L + DV+S GV+L ++ R D
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 50 IGEGGFGSV------YKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLV 103
+GEG FG V G+ I+ KVL+ QG E E++ + + H +++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR--HPHII 67
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
KL+ I+V +Y N + +R K + R I + Y H
Sbjct: 68 KLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
+VHRD+K N+LLD++ N KI+DFGLS + + ++ G+ Y APE ISG
Sbjct: 123 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISG 176
Query: 224 RLTR--KSDVYSFGVLLLEIVSGRTAVD 249
+L + DV+S GV+L ++ R D
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAV-KVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G+G FG VYK + ++ +++A KV+ +S++ +++M E+ +A+ + H N+VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKLLD 101
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
++ ++ ++ +L E+ + + + L Y+H+
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV---VCKQTLDALNYLHDN---K 155
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR--VAGTLGYLAPEYAISGR- 224
++HRD+K NIL + + K++DFG+S +NT I R GT ++APE +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 225 ----LTRKSDVYSFGVLLLEI 241
K+DV+S G+ L+E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 80 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 133
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 72
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 122
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 72
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 122
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 19/201 (9%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAV-KVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G+G FG VYK + ++ +++A KV+ +S++ +++M E+ +A+ + H N+VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKLLD 101
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
++ ++ ++ +L E+ + + + L Y+H+
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV---VCKQTLDALNYLHDN---K 155
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVA--GTLGYLAPEYAISGR- 224
++HRD+K NIL + + K++DFG+S +NT I R + GT ++APE +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 225 ----LTRKSDVYSFGVLLLEI 241
K+DV+S G+ L+E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 72
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 122
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHEN--LVKL 105
++G G FG+V KG Q +V + + +++ + E+ + ANV +N +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C + +LV + L++ L ++ R K K E++ + G+ Y+ E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD--KNIIELVHQVSMGMKYLEES-- 130
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPEYAISG 223
+ VHRD+ N+LL KISDFGLSK EN T + + APE
Sbjct: 131 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 224 RLTRKSDVYSFGVLLLEIVS 243
+ + KSDV+SFGVL+ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 70
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 120
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 50 IGEGGFGSV------YKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLV 103
+GEG FG V G+ I+ KVL+ QG E E++ + + H +++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR--HPHII 76
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
KL+ I+V +Y N + +R K + R I + Y H
Sbjct: 77 KLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
+VHRD+K N+LLD++ N KI+DFGLS + + ++ G+ Y APE ISG
Sbjct: 132 ---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISG 185
Query: 224 RLTR--KSDVYSFGVLLLEIVSGRTAVD 249
+L + DV+S GV+L ++ R D
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNVCHENLV 103
+G G FG+VYKG + +G V + V E S + KE + E MA+V+ H +
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH--VC 74
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+L G C+ + L+ MP L + + + G + + I +G+ Y+ +
Sbjct: 75 RLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAIS 222
+VHRD+ N+L+ + KI+DFGL+KL E + + + ++A E +
Sbjct: 131 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
T +SDV+S+GV + E+++
Sbjct: 188 RIYTHQSDVWSYGVTVWELMT 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 72
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 122
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVN 96
++ + +G GG V+ R L+ VAVKVL + + F E + A +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 97 VCHENLVKLHGG----CIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
H +V ++ GP +V +Y+ +L + E K E+I
Sbjct: 71 --HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIAD 124
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAG 210
+ L + H Q ++HRD+K +NI++ K+ DFG+++ + N+ + V G
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
T YL+PE A + +SDVYS G +L E+++G
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHEN--LVKL 105
++G G FG+V KG Q +V + + +++ + E+ + ANV +N +V++
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C + +LV + L++ L ++ R K K E++ + G+ Y+ E
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD--KNIIELVHQVSMGMKYLEES-- 126
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPEYAISG 223
+ VHRD+ N+LL KISDFGLSK EN T + + APE
Sbjct: 127 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 224 RLTRKSDVYSFGVLLLEIVS 243
+ + KSDV+SFGVL+ E S
Sbjct: 186 KFSSKSDVWSFGVLMWEAFS 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDG-TIVAVKVLSVESKQGEK----EFMSEVASMA 93
A + +IGEG +G V+K R L++G VA+K + V++ GE+ + EVA +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIREVAVLR 66
Query: 94 NVNVC-HENLVKLHGGCI----DGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
++ H N+V+L C D ++ LV++++ + L+ L ++ + +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGVPTETIK 123
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+++ + RGL ++H VVHRD+K NIL+ + K++DFGL++++ + T
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTS 178
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 241
V TL Y APE + D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 44 FRWSNKIGEGGFGSV------YKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNV 97
++ +GEG FG V G+ I+ KVL+ QG E E++ + +
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR- 66
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H +++KL+ I+V +Y N + +R K + R I +
Sbjct: 67 -HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAV 120
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
Y H +VHRD+K N+LLD++ N KI+DFGLS + + ++ G+ Y AP
Sbjct: 121 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAP 175
Query: 218 EYAISGRLTR--KSDVYSFGVLLLEIVSGRTAVD 249
E ISG+L + DV+S GV+L ++ R D
Sbjct: 176 E-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDG-TIVAVKVLSVESKQGEK----EFMSEVASMA 93
A + +IGEG +G V+K R L++G VA+K + V++ GE+ + EVA +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIREVAVLR 66
Query: 94 NVNVC-HENLVKLHGGCI----DGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
++ H N+V+L C D ++ LV++++ + L+ L ++ + +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGVPTETIK 123
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+++ + RGL ++H VVHRD+K NIL+ + K++DFGL++++ + T
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTS 178
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 241
V TL Y APE + D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHEN--LVKL 105
++G G FG+V KG Q +V + + +++ + E+ + ANV +N +V++
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C + +LV + L++ L ++ R K K E++ + G+ Y+ E
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD--KNIIELVHQVSMGMKYLEES-- 124
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPEYAISG 223
+ VHRD+ N+LL KISDFGLSK EN T + + APE
Sbjct: 125 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 224 RLTRKSDVYSFGVLLLEIVS 243
+ + KSDV+SFGVL+ E S
Sbjct: 184 KFSSKSDVWSFGVLMWEAFS 203
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKGR-LQDG-TIVAVKVLSVESKQGEK----EFMSEVASMA 93
A + +IGEG +G V+K R L++G VA+K + V++ GE+ + EVA +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIREVAVLR 66
Query: 94 NVNVC-HENLVKLHGGCI----DGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
++ H N+V+L C D ++ LV++++ + L+ L ++ + +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGVPTETIK 123
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+++ + RGL ++H VVHRD+K NIL+ + K++DFGL++++ + T
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTS 178
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 241
V TL Y APE + D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHEN--LVKL 105
++G G FG+V KG Q +V + + +++ + E+ + ANV +N +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C + +LV + L++ L ++ R K K E++ + G+ Y+ E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD--KNIIELVHQVSMGMKYLEES-- 130
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPEYAISG 223
+ VHRD+ N+LL KISDFGLSK EN T + + APE
Sbjct: 131 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 224 RLTRKSDVYSFGVLLLEIVS 243
+ + KSDV+SFGVL+ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFR-- 83
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 143 YIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKFYG 72
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 122
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVN 96
++ + +G GG V+ R L+ VAVKVL + + F E + A +N
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 97 VCHENLVKLH----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
H +V ++ GP +V +Y+ +L + E K E+I
Sbjct: 88 --HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIAD 141
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAG 210
+ L + H Q ++HRD+K +NI++ K+ DFG+++ + N+ + V G
Sbjct: 142 ACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
T YL+PE A + +SDVYS G +L E+++G
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHEN--LVKL 105
++G G FG+V KG Q +V + + +++ + E+ + ANV +N +V++
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C + +LV + L++ L ++ R K K E++ + G+ Y+ E
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD--KNIIELVHQVSMGMKYLEES-- 136
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPEYAISG 223
+ VHRD+ N+LL KISDFGLSK EN T + + APE
Sbjct: 137 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 224 RLTRKSDVYSFGVLLLEIVS 243
+ + KSDV+SFGVL+ E S
Sbjct: 196 KFSSKSDVWSFGVLMWEAFS 215
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG +G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVN 96
++ + +G GG V+ R L+ VAVKVL + + F E + A +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 97 VCHENLVKLH----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
H +V ++ GP +V +Y+ +L + E K E+I
Sbjct: 71 --HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIAD 124
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE--NTTHISTRVAG 210
+ L + H Q ++HRD+K +NI++ K+ DFG+++ + N+ + V G
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
T YL+PE A + +SDVYS G +L E+++G
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHEN--LVKL 105
++G G FG+V KG Q +V + + +++ + E+ + ANV +N +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C + +LV + L++ L ++ R K K E++ + G+ Y+ E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD--KNIIELVHQVSMGMKYLEES-- 146
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPEYAISG 223
+ VHRD+ N+LL KISDFGLSK EN T + + APE
Sbjct: 147 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 224 RLTRKSDVYSFGVLLLEIVS 243
+ + KSDV+SFGVL+ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHEN--LVKL 105
++G G FG+V KG Q +V + + +++ + E+ + ANV +N +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C + +LV + L++ L ++ R K K E++ + G+ Y+ E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD--KNIIELVHQVSMGMKYLEES-- 146
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPEYAISG 223
+ VHRD+ N+LL KISDFGLSK EN T + + APE
Sbjct: 147 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 224 RLTRKSDVYSFGVLLLEIVS 243
+ + KSDV+SFGVL+ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHEN--LVKL 105
++G G FG+V KG Q +V + + +++ + E+ + ANV +N +V++
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C + +LV + L++ L ++ R K K E++ + G+ Y+ E
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD--KNIIELVHQVSMGMKYLEES-- 144
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPEYAISG 223
+ VHRD+ N+LL KISDFGLSK EN T + + APE
Sbjct: 145 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 224 RLTRKSDVYSFGVLLLEIVS 243
+ + KSDV+SFGVL+ E S
Sbjct: 204 KFSSKSDVWSFGVLMWEAFS 223
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 47 SNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
S +G G G V K + T V + + ++ E NV E L KL+
Sbjct: 14 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 72
Query: 107 GGCI-------DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
CI D +V + M L ++G ++ + ++++ + Y
Sbjct: 73 HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV----QY 128
Query: 160 IHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT YLA
Sbjct: 129 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLA 183
Query: 217 PEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLVDKAW 264
PE +S R D +S GV+L +SG RT V Q+ G+Y+ + + W
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 243
Query: 265 GMYNSKEL-----MNLVDPMLYGNFPENEAIR 291
+ K L + +VDP F EA+R
Sbjct: 244 AEVSEKALDLVKKLLVVDPK--ARFTTEEALR 273
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 47 SNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
S +G G G V K + T V + + ++ E NV E L KL+
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 107 GGCI-------DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
CI D +V + M L ++G ++ + ++++ + Y
Sbjct: 74 HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV----QY 129
Query: 160 IHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT YLA
Sbjct: 130 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLA 184
Query: 217 PEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLVDKAW 264
PE +S R D +S GV+L +SG RT V Q+ G+Y+ + + W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 265 GMYNSKEL-----MNLVDPMLYGNFPENEAIR 291
+ K L + +VDP F EA+R
Sbjct: 245 AEVSEKALDLVKKLLVVDPK--ARFTTEEALR 274
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 47 SNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
S +G G G V K + T V + + ++ E NV E L KL+
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 107 GGCI-------DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
CI D +V + M L ++G ++ + ++++ + Y
Sbjct: 74 HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV----QY 129
Query: 160 IHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT YLA
Sbjct: 130 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLA 184
Query: 217 PEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLVDKAW 264
PE +S R D +S GV+L +SG RT V Q+ G+Y+ + + W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 265 GMYNSKEL-----MNLVDPMLYGNFPENEAIR 291
+ K L + +VDP F EA+R
Sbjct: 245 AEVSEKALDLVKKLLVVDPK--ARFTTEEALR 274
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I G+
Sbjct: 74 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAEGM 127
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 128 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 185 LESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 47 SNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
S +G G G V K + T V + + ++ E NV E L KL+
Sbjct: 154 SKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 212
Query: 107 GGCI-------DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
CI D +V + M L ++G ++ + ++++ + Y
Sbjct: 213 HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV----QY 268
Query: 160 IHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT YLA
Sbjct: 269 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLA 323
Query: 217 PEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLVDKAW 264
PE +S R D +S GV+L +SG RT V Q+ G+Y+ + + W
Sbjct: 324 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 383
Query: 265 GMYNSKEL-----MNLVDPMLYGNFPENEAIR 291
+ K L + +VDP F EA+R
Sbjct: 384 AEVSEKALDLVKKLLVVDPK--ARFTTEEALR 413
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 47 SNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
S +G G G V K + T V + + ++ E NV E L KL+
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 107 GGCI-------DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
CI D +V + M L ++G ++ + ++++ + Y
Sbjct: 74 HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV----QY 129
Query: 160 IHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT YLA
Sbjct: 130 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLA 184
Query: 217 PEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLVDKAW 264
PE +S R D +S GV+L +SG RT V Q+ G+Y+ + + W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 265 GMYNSKEL-----MNLVDPMLYGNFPENEAIR 291
+ K L + +VDP F EA+R
Sbjct: 245 AEVSEKALDLVKKLLVVDPK--ARFTTEEALR 274
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 47 SNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
S +G G G V K + T V + + ++ E NV E L KL+
Sbjct: 21 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 79
Query: 107 GGCI-------DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
CI D +V + M L ++G ++ + ++++ + Y
Sbjct: 80 HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV----QY 135
Query: 160 IHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT YLA
Sbjct: 136 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLA 190
Query: 217 PEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLVDKAW 264
PE +S R D +S GV+L +SG RT V Q+ G+Y+ + + W
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 250
Query: 265 GMYNSKEL-----MNLVDPMLYGNFPENEAIR 291
+ K L + +VDP F EA+R
Sbjct: 251 AEVSEKALDLVKKLLVVDPK--ARFTTEEALR 280
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 47 SNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
S +G G G V K + T V + + ++ E NV E L KL+
Sbjct: 140 SKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 198
Query: 107 GGCI-------DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
CI D +V + M L ++G ++ + ++++ + Y
Sbjct: 199 HPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV----QY 254
Query: 160 IHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+HE ++HRD+K N+LL +++ KI+DFG SK+ E T + + GT YLA
Sbjct: 255 LHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLA 309
Query: 217 PEYAIS---GRLTRKSDVYSFGVLLLEIVSG-------RTAVDFDVQL--GEYHLVDKAW 264
PE +S R D +S GV+L +SG RT V Q+ G+Y+ + + W
Sbjct: 310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 369
Query: 265 GMYNSKEL-----MNLVDPMLYGNFPENEAIR 291
+ K L + +VDP F EA+R
Sbjct: 370 AEVSEKALDLVKKLLVVDPK--ARFTTEEALR 399
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 83
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 143 YIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 27 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 84
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 85 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 143
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 144 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 20 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 77
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 78 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 136
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 137 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 28 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 85
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 86 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 144
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 145 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 19 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 76
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 77 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 135
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 136 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 83
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 143 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFR-- 83
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 143 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIG+G G+VY + G VA++ ++++ + ++ ++E+ M + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK--NPNIVNYLD 84
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
+ G +V +Y+ SL+ + + R + + L ++H
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---Q 136
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRDIK+ NILL + + K++DFG +++ PE + + + GT ++APE
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAYG 194
Query: 227 RKSDVYSFGVLLLEIVSG 244
K D++S G++ +E++ G
Sbjct: 195 PKVDIWSLGIMAIEMIEG 212
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 20 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 77
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 78 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 136
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 137 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 24 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 81
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 82 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 140
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 141 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 22 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 79
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 80 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 139 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 22 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 79
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 80 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 139 YIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 22 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 79
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 80 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 139 YIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 27 KNINAFSYNQLKIAT---NGFRWSNKIGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQG- 81
K + AF + K+ + F +++G G G V+K G ++A K++ +E K
Sbjct: 7 KRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI 66
Query: 82 EKEFMSEVASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAK 140
+ + E+ + N + +V +G DG I + ++M SL Q L K+ +
Sbjct: 67 RNQIIRELQVLHECNSPY--IVGFYGAFYSDGEISICM-EHMDGGSLDQVL----KKAGR 119
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPEN 200
+ ++ + + +GL Y+ E+ + ++HRD+K SNIL++ K+ DFG+S ++
Sbjct: 120 IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 177
Query: 201 TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 248
++ GT Y++PE + +SD++S G+ L+E+ GR +
Sbjct: 178 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 30 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 87
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 88 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 146
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 147 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 22 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 79
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 80 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 139 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEF----MSEVASMA 93
+AT+ + +IG G +G+VYK R G VA+K SV GE+ + EVA +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLR 58
Query: 94 NVNVC-HENLVKLHGGC----IDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKAR- 146
+ H N+V+L C D ++ LV+++ + Q L + G A
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAET 113
Query: 147 -REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS 205
++++ RGL ++H +VHRD+K NIL+ K++DFGL++++
Sbjct: 114 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP 170
Query: 206 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 241
V TL Y APE + D++S G + E+
Sbjct: 171 VVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIG+G G+VY + G VA++ ++++ + ++ ++E+ M + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK--NPNIVNYLD 84
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
+ G +V +Y+ SL+ + + R + + L ++H
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---Q 136
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRDIK+ NILL + + K++DFG +++ PE + + + GT ++APE
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYG 194
Query: 227 RKSDVYSFGVLLLEIVSG 244
K D++S G++ +E++ G
Sbjct: 195 PKVDIWSLGIMAIEMIEG 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 20/219 (9%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVN-VCHENLVKLH 106
+IG G FG+VY R +++ +VA+K +S KQ +++ + + + + H N ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G + LV +Y S S L +K + A + G +GLAY+H
Sbjct: 121 GCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSH--- 173
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAIS--- 222
+++HRD+K NILL + K+ DFG + + P N GT ++APE ++
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDE 227
Query: 223 GRLTRKSDVYSFGVLLLEIVSGRTAV-DFDVQLGEYHLV 260
G+ K DV+S G+ +E+ + + + + YH+
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 266
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 69
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 180
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 228
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 91
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
++ SD+++ G ++ ++V+G
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVLSVE-SKQGEKEFMSEVASMANVNVCHENLVKLH 106
++G GGFG V + QD G VA+K E S + + + E+ M +N H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN--HPNVVSAR 78
Query: 107 GGCIDGPCRI-------LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
DG ++ L +Y L + L + + R ++ I L Y
Sbjct: 79 E-VPDGLQKLAPNDLPLLAMEYCEGGDLRK-YLNQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+HE ++HRD+K NI+L Q KI D G +K + + T GTL YLA
Sbjct: 137 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLA 191
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYH 258
PE + T D +SFG L E ++G + Q ++H
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWH 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 42 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 99
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 100 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 159 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEF----MSEVASMA 93
+AT+ + +IG G +G+VYK R G VA+K SV GE+ + EVA +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLR 58
Query: 94 NVNVC-HENLVKLHGGC----IDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKAR- 146
+ H N+V+L C D ++ LV+++ + Q L + G A
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAET 113
Query: 147 -REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS 205
++++ RGL ++H +VHRD+K NIL+ K++DFGL++++ +
Sbjct: 114 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMAL 168
Query: 206 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 241
V TL Y APE + D++S G + E+
Sbjct: 169 APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIG+G G+VY + G VA++ ++++ + ++ ++E+ M + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK--NPNIVNYLD 84
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
+ G +V +Y+ SL+ + + R + + L ++H
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---Q 136
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRDIK+ NILL + + K++DFG +++ PE + + + GT ++APE
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYG 194
Query: 227 RKSDVYSFGVLLLEIVSG 244
K D++S G++ +E++ G
Sbjct: 195 PKVDIWSLGIMAIEMIEG 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLS---VESKQGEKEFMSEVASMANVNVCH 99
+R IG+G F V R + G VAVK++ + S +K F EV +N H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLN--H 72
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLG-----EEKRRAKFGWKARREIIMGIG 154
N+VKL LV +Y + L+ E++ RAKF R+I+ +
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF-----RQIVSAV- 126
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
Y H Q +VHRD+K N+LLD + N KI+DFG S F + G Y
Sbjct: 127 ---QYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEF--TFGNKLDAFCGAPPY 178
Query: 215 LAPEYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVD 249
APE + + DV+S GV+L +VSG D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIG+G G+VY + G VA++ ++++ + ++ ++E+ M + N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK--NPNIVNYLD 85
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
+ G +V +Y+ SL+ + + R + + L ++H
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---Q 137
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRDIK+ NILL + + K++DFG +++ PE + + + GT ++APE
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYG 195
Query: 227 RKSDVYSFGVLLLEIVSG 244
K D++S G++ +E++ G
Sbjct: 196 PKVDIWSLGIMAIEMIEG 213
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 83
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLK 142
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 143 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 62
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 173
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 61
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 172
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHEN--LVKL 105
++G G FG+V KG Q +V + + +++ + E+ + ANV +N +V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C + +LV + L++ L ++ R K K E++ + G+ Y+ E
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD--KNIIELVHQVSMGMKYLEES-- 488
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAISG 223
+ VHRD+ N+LL KISDFGLSK + + + G + + APE
Sbjct: 489 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 224 RLTRKSDVYSFGVLLLEIVS 243
+ + KSDV+SFGVL+ E S
Sbjct: 548 KFSSKSDVWSFGVLMWEAFS 567
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 97/222 (43%), Gaps = 21/222 (9%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVLSVE-SKQGEKEFMSEVASMANVNVCHENLVKLH 106
++G GGFG V + QD G VA+K E S + + + E+ M +N H N+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN--HPNVVSAR 79
Query: 107 GGCIDGPCRI-------LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
DG ++ L +Y L + L + + R ++ I L Y
Sbjct: 80 E-VPDGLQKLAPNDLPLLAMEYCEGGDLRK-YLNQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 160 IHEEIQPHVVHRDIKTSNILLD---QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+HE ++HRD+K NI+L Q KI D G +K + + T GTL YLA
Sbjct: 138 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLA 192
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYH 258
PE + T D +SFG L E ++G + Q ++H
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWH 234
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 69
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 180
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 228
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 62
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 173
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 22 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 79
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 80 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 139 YIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANV 95
+ F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
N H N+VKL LV++++ + L + + + + + + +
Sbjct: 64 N--HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQ 118
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLG 213
GLA+ H V+HRD+K N+L++ K++DFGL++ F P T T TL
Sbjct: 119 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLW 172
Query: 214 YLAPEYAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
Y APE + + + D++S G + E+V+ R D ++ + + + G
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 225
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEKE-FMS 87
++ + N + +G G FG V + + VAVK+L + E+E MS
Sbjct: 32 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 91
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E+ ++ + H N+V L G C G +++ +Y L L ++R F
Sbjct: 92 ELKVLSYLGN-HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTS 147
Query: 148 EIIMG-----------------IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISD 190
IM + +G+A++ + + +HRD+ NILL KI D
Sbjct: 148 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICD 204
Query: 191 FGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
FGL++ ++ ++ A + ++APE + T +SDV+S+G+ L E+ S
Sbjct: 205 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 106/202 (52%), Gaps = 21/202 (10%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G+G FG VYK + ++ G + A KV+ +S++ ++++ E+ +A + H +VKL G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD--HPYIVKLLG 75
Query: 108 GCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
DG I++ ++ P ++ +L ++ + + + + L ++H +
Sbjct: 76 AYYHDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLHSK--- 128
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR--VAGTLGYLAPEYAISGR 224
++HRD+K N+L+ + +++DFG+S +N + R GT ++APE +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 225 LTR-----KSDVYSFGVLLLEI 241
+ K+D++S G+ L+E+
Sbjct: 186 MKDTPYDYKADIWSLGITLIEM 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMAN 94
Q+K+ F +G+G FG V+ + A+K L + + + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 95 VNVCHENLVKLHGGCI--DGPCRILVYDYMPNNSLS---QTLLGEEKRRAKFGWKARREI 149
+++ E+ H C V +Y+ L Q+ + RA F EI
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF---YAAEI 128
Query: 150 IMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT--THISTR 207
I+G L ++H + +V+RD+K NILLD++ + KI+DFG+ K EN +
Sbjct: 129 ILG----LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNE 178
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTA 247
GT Y+APE + + D +SFGVLL E++ G++
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 61
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 172
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 63
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 174
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 24 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFR-- 81
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 82 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 140
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 141 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 62
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 173
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 88
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 144
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K+ PE+ + GT Y++PE
Sbjct: 145 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 15/215 (6%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQG-EKEFMSEVASMAN 94
+++ + F +++G G G V+K G ++A K++ +E K + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 95 VNVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N + +V +G DG I + ++M SL Q L K+ + + ++ + +
Sbjct: 61 CNSPY--IVGFYGAFYSDGEISICM-EHMDGGSLDQVL----KKAGRIPEQILGKVSIAV 113
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
+GL Y+ E+ + ++HRD+K SNIL++ K+ DFG+S ++ ++ GT
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRS 168
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 248
Y++PE + +SD++S G+ L+E+ GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 88
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 144
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 145 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMS-----EVASM 92
+AT+ + +IG G +G+VYK R G VA+K + V + G + EVA +
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 93 ANVNVC-HENLVKLHGGC----IDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKAR 146
+ H N+V+L C D ++ LV++++ Q L + G A
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-----DQDLRTYLDKAPPPGLPAE 120
Query: 147 --REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHI 204
++++ RGL ++H +VHRD+K NIL+ K++DFGL++++ +
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMA 175
Query: 205 STRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 241
T V TL Y APE + D++S G + E+
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 106/202 (52%), Gaps = 21/202 (10%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G+G FG VYK + ++ G + A KV+ +S++ ++++ E+ +A + H +VKL G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD--HPYIVKLLG 83
Query: 108 GCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
DG I++ ++ P ++ +L ++ + + + + L ++H +
Sbjct: 84 AYYHDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLHSK--- 136
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR--VAGTLGYLAPEYAISGR 224
++HRD+K N+L+ + +++DFG+S +N + R GT ++APE +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 225 LTR-----KSDVYSFGVLLLEI 241
+ K+D++S G+ L+E+
Sbjct: 194 MKDTPYDYKADIWSLGITLIEM 215
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEKE-FMS 87
++ + N + +G G FG V + + VAVK+L + E+E MS
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 98
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E+ ++ + H N+V L G C G +++ +Y L L ++R F
Sbjct: 99 ELKVLSYLGN-HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTS 154
Query: 148 EIIMG-----------------IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISD 190
IM + +G+A++ + + +HRD+ NILL KI D
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICD 211
Query: 191 FGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
FGL++ ++ ++ A + ++APE + T +SDV+S+G+ L E+ S
Sbjct: 212 FGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 24/221 (10%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEF---MSEVASMANVNVCHENLVK 104
+IG G FG+VY R +++ +VA+K +S KQ +++ + EV + + H N ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR--HPNTIQ 79
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
G + LV +Y S S L +K + A + G +GLAY+H
Sbjct: 80 YRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLHSH- 134
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAIS- 222
+++HRD+K NILL + K+ DFG + + P N GT ++APE ++
Sbjct: 135 --NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAM 186
Query: 223 --GRLTRKSDVYSFGVLLLEIVSGRTAV-DFDVQLGEYHLV 260
G+ K DV+S G+ +E+ + + + + YH+
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 91
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 15/215 (6%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQG-EKEFMSEVASMAN 94
+++ + F +++G G G V+K G ++A K++ +E K + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 95 VNVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N + +V +G DG I + ++M SL Q L K+ + + ++ + +
Sbjct: 61 CNSPY--IVGFYGAFYSDGEISICM-EHMDGGSLDQVL----KKAGRIPEQILGKVSIAV 113
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
+GL Y+ E+ + ++HRD+K SNIL++ K+ DFG+S ++ ++ GT
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRS 168
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 248
Y++PE + +SD++S G+ L+E+ GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ + G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 84 PH--VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 137
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 89
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +YMP + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ K++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 68
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 124
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 125 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 65
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ S+ + + + + +GLA+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 123 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 178
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSV-ESKQGEKEFMSEVASMANVNVCHEN--LVKL 105
++G G FG+V KG Q +V + + +++ + E+ + ANV +N +V++
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
G C + +LV + L++ L ++ R K K E++ + G+ Y+ E
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD--KNIIELVHQVSMGMKYLEES-- 489
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--TLGYLAPEYAISG 223
+ VHRD+ N+LL KISDFGLSK + + + G + + APE
Sbjct: 490 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 224 RLTRKSDVYSFGVLLLEIVS 243
+ + KSDV+SFGVL+ E S
Sbjct: 549 KFSSKSDVWSFGVLMWEAFS 568
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 15/215 (6%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQG-EKEFMSEVASMAN 94
+++ + F +++G G G V+K G ++A K++ +E K + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 95 VNVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N + +V +G DG I + ++M SL Q L K+ + + ++ + +
Sbjct: 61 CNSPY--IVGFYGAFYSDGEISICM-EHMDGGSLDQVL----KKAGRIPEQILGKVSIAV 113
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
+GL Y+ E+ + ++HRD+K SNIL++ K+ DFG+S ++ ++ GT
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRS 168
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 248
Y++PE + +SD++S G+ L+E+ GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 69
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 125
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 126 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 96
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 152
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 153 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 63
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ S+ + + + + +GLA+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 121 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 176
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 73
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 129
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 130 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ + G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 77 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 130
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 67
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 123
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 124 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEKE-FMS 87
++ + N + +G G FG V + + VAVK+L + E+E MS
Sbjct: 34 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 93
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E+ ++ + H N+V L G C G +++ +Y L L ++R F
Sbjct: 94 ELKVLSYLGN-HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTS 149
Query: 148 EIIMG-----------------IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISD 190
IM + +G+A++ + + +HRD+ NILL KI D
Sbjct: 150 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICD 206
Query: 191 FGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
FGL++ ++ ++ A + ++APE + T +SDV+S+G+ L E+ S
Sbjct: 207 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +YMP + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ K++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 15/215 (6%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQG-EKEFMSEVASMAN 94
+++ + F +++G G G V+K G ++A K++ +E K + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 95 VNVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N + +V +G DG I + ++M SL Q L K+ + + ++ + +
Sbjct: 61 CNSPY--IVGFYGAFYSDGEISICM-EHMDGGSLDQVL----KKAGRIPEQILGKVSIAV 113
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
+GL Y+ E+ + ++HRD+K SNIL++ K+ DFG+S ++ ++ GT
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRS 168
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 248
Y++PE + +SD++S G+ L+E+ GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 15/215 (6%)
Query: 37 LKIATNGFRWSNKIGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQG-EKEFMSEVASMAN 94
+++ + F +++G G G V+K G ++A K++ +E K + + E+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 95 VNVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N + +V +G DG I + ++M SL Q L K+ + + ++ + +
Sbjct: 61 CNSPY--IVGFYGAFYSDGEISICM-EHMDGGSLDQVL----KKAGRIPEQILGKVSIAV 113
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
+GL Y+ E+ + ++HRD+K SNIL++ K+ DFG+S ++ ++ GT
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRS 168
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV 248
Y++PE + +SD++S G+ L+E+ GR +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 89
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 92
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 148
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 149 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEKE-FMS 87
++ + N + +G G FG V + + VAVK+L + E+E MS
Sbjct: 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 75
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E+ ++ + H N+V L G C G +++ +Y L L ++R F
Sbjct: 76 ELKVLSYLGN-HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTS 131
Query: 148 EIIMG-----------------IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISD 190
IM + +G+A++ + + +HRD+ NILL KI D
Sbjct: 132 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICD 188
Query: 191 FGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
FGL++ ++ ++ A + ++APE + T +SDV+S+G+ L E+ S
Sbjct: 189 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 91
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEF----MSEVASMA 93
+AT+ + +IG G +G+VYK R G VA+K SV GE+ + EVA +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLR 58
Query: 94 NVNVC-HENLVKLHGGC----IDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKAR- 146
+ H N+V+L C D ++ LV+++ + Q L + G A
Sbjct: 59 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAET 113
Query: 147 -REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS 205
++++ RGL ++H +VHRD+K NIL+ K++DFGL++++ +
Sbjct: 114 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMAL 168
Query: 206 TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEI 241
V TL Y APE + D++S G + E+
Sbjct: 169 DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 50 IGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+GEG G V R+ + VAVK++ ++ E + + + N + HEN+VK +G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYG 71
Query: 108 GCIDGPCRILVYDYMPNNSLSQTL---LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + L +Y L + +G + A+ + G+ Y+H
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH--- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFP-ENTTHISTRVAGTLGYLAPEYAISG 223
+ HRDIK N+LLD+ N KISDFGL+ +F N + ++ GTL Y+APE
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 224 RL-TRKSDVYSFGVLLLEIVSGRTAVD 249
DV+S G++L +++G D
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 91
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGEKE-FMS 87
++ + N + +G G FG V + + VAVK+L + E+E MS
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS 98
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
E+ ++ + H N+V L G C G +++ +Y L L ++R F
Sbjct: 99 ELKVLSYLGN-HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTS 154
Query: 148 EIIMG-----------------IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISD 190
IM + +G+A++ + + +HRD+ NILL KI D
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICD 211
Query: 191 FGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
FGL++ ++ ++ A + ++APE + T +SDV+S+G+ L E+ S
Sbjct: 212 FGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ + G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 84 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 137
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFGL+KL E + + + ++A
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 79 PH--VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 132
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFG +KL E + + + ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 92
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 148
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 149 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 43/224 (19%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG 108
+G+G FG V K R D A+K + +++ +SEV +A++N H+ +V+ +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLN--HQYVVRYYAA 70
Query: 109 CID-------------GPCRILVYDYMPNNSLSQTLLGEE--KRRAKFGWKARREIIMGI 153
++ + +Y N +L + E ++R ++ W+ R+I+
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-WRLFRQIL--- 126
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--------------LFPE 199
L+YIH + ++HRD+K NI +D++ N KI DFGL+K P
Sbjct: 127 -EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 200 NTTHISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFGVLLLEIV 242
++ ++++ + GT Y+A E +G K D+YS G++ E++
Sbjct: 183 SSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 66
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 122
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 123 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQDGT-IVAVKVLSVES--KQGEKEFMSEVASM 92
Q+++ F IG G FG V +L++ + A+K+L+ K+ E E +
Sbjct: 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV 127
Query: 93 ANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
VN + + LH D LV DY L L E R + + R +
Sbjct: 128 L-VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE---EMARFYLAE 183
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL 212
+ + +H Q H VHRDIK NIL+D N + +++DFG E+ T S+ GT
Sbjct: 184 MVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTP 240
Query: 213 GYLAPEYAIS-----GRLTRKSDVYSFGVLLLEIVSGRT 246
Y++PE + GR + D +S GV + E++ G T
Sbjct: 241 DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET 279
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 91
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 94
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 150
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 151 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 81 PH--VCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 134
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFG +KL E + + + ++A
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNVCHENLV 103
+G G FG+VYKG + +G V + V E S + KE + E MA+V+ H +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH--VC 82
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+L G C+ + L+ MP L + + + G + + I +G+ Y+ +
Sbjct: 83 RLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAIS 222
+VHRD+ N+L+ + KI+DFG +KL E + + + ++A E +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
T +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 89
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 16/217 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVASMANVN 96
++ + + +G G FG V G Q G VAVK+L+ + + + N+
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 97 VC-HENLVKLHGGCIDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ H +++KL+ I P +V +Y+ L + + + R + I
Sbjct: 67 LFRHPHIIKLYQ-VISTPTDFFMVMEYVSGGELFDYIC----KHGRVEEMEARRLFQQIL 121
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
+ Y H + VVHRD+K N+LLD + N KI+DFGLS + + ++ G+ Y
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNY 176
Query: 215 LAPEYAISGRLTR--KSDVYSFGVLLLEIVSGRTAVD 249
APE ISGRL + D++S GV+L ++ G D
Sbjct: 177 AAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 65
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ S+ + + + + +GLA+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 178
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 24 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFR-- 81
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 82 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 140
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T Y A
Sbjct: 141 YIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 10/201 (4%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVES-KQGEKEFM-SEVASMANVNVCHENLVKLH 106
IG G +G K R + DG I+ K L S + EK+ + SEV + + H N+V+ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK--HPNIVRYY 71
Query: 107 GGCIDGPCRIL--VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
ID L V +Y L+ + K R + ++ + L H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 165 Q--PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAIS 222
V+HRD+K +N+ LD N K+ DFGL+++ + + GT Y++PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYMSPEQMNR 190
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
KSD++S G LL E+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 64
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ S+ + + + + +GLA+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 122 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 177
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F +V R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 91
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 147
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNV 97
F+ +G G FG+VYKG + +G V + V E S + KE + E MA+V+
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 98 CHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
H + +L G C+ + L+ MP L + + + G + + I +G+
Sbjct: 84 PH--VCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGM 137
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLA 216
Y+ + +VHRD+ N+L+ + KI+DFG +KL E + + + ++A
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVS 243
E + T +SDV+S+GV + E+++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 43/224 (19%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG 108
+G+G FG V K R D A+K + +++ +SEV +A++N H+ +V+ +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLN--HQYVVRYYAA 70
Query: 109 CID-------------GPCRILVYDYMPNNSLSQTLLGEE--KRRAKFGWKARREIIMGI 153
++ + +Y N +L + E ++R ++ W+ R+I+
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-WRLFRQIL--- 126
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--------------LFPE 199
L+YIH + ++HRD+K NI +D++ N KI DFGL+K P
Sbjct: 127 -EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 200 NTTHISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFGVLLLEIV 242
++ ++++ + GT Y+A E +G K D+YS G++ E++
Sbjct: 183 SSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNVCHENLV 103
+G G FG+VYKG + +G V + V E S + KE + E MA+V+ H +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH--VC 80
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+L G C+ + L+ MP L + + + G + + I +G+ Y+ +
Sbjct: 81 RLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAIS 222
+VHRD+ N+L+ + KI+DFG +KL E + + + ++A E +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
T +SDV+S+GV + E+++
Sbjct: 194 RIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 16/201 (7%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVE-----SKQGEKEFMSEVASMANVNVCHENLV 103
+G G FG+VYKG + +G V + V E S + KE + E MA+V+ H +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH--VC 82
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
+L G C+ + L+ MP L + + + G + + I +G+ Y+ +
Sbjct: 83 RLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAIS 222
+VHRD+ N+L+ + KI+DFG +KL E + + + ++A E +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 223 GRLTRKSDVYSFGVLLLEIVS 243
T +SDV+S+GV + E+++
Sbjct: 196 RIYTHQSDVWSYGVTVWELMT 216
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVASMANVN 96
++ + + +G G FG V G Q G VAVK+L+ + + + N+
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 97 VC-HENLVKLHGGCIDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
+ H +++KL+ I P +V +Y+ L + + + R + I
Sbjct: 67 LFRHPHIIKLYQ-VISTPTDFFMVMEYVSGGELFDYIC----KHGRVEEMEARRLFQQIL 121
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGY 214
+ Y H + VVHRD+K N+LLD + N KI+DFGLS + + G+ Y
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRDSCGSPNY 176
Query: 215 LAPEYAISGRLTR--KSDVYSFGVLLLEIVSGRTAVD 249
APE ISGRL + D++S GV+L ++ G D
Sbjct: 177 AAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 108/212 (50%), Gaps = 17/212 (8%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQG-EKEFMSEVASMANV 95
++ + F +++G G G V+K G ++A K++ +E K + + E+ +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 96 NVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIG 154
N + +V +G DG I + ++M SL Q L K+ + + ++ + +
Sbjct: 65 NSPY--IVGFYGAFYSDGEISICM-EHMDGGSLDQVL----KKAGRIPEQILGKVSIAVI 117
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLG 213
+GL Y+ E+ + ++HRD+K SNIL++ K+ DFG+S +L E ++ GT
Sbjct: 118 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRS 171
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
Y++PE + +SD++S G+ L+E+ GR
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 62
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 175
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 66
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 179
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%)
Query: 50 IGEGGFGSV-----YKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC-HENLV 103
+GEG FG V YK + + VA+K +S + + M ++ + + H +++
Sbjct: 17 LGEGSFGKVKLATHYKTQQK----VALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
KL+ I P I++ L ++ +++ G + ++II I Y H
Sbjct: 73 KLYD-VITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAI----EYCHRH 127
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
+VHRD+K N+LLD N N KI+DFGLS + + ++ G+ Y APE I+G
Sbjct: 128 ---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VING 181
Query: 224 RLTR--KSDVYSFGVLLLEIVSGRTAVD 249
+L + DV+S G++L ++ GR D
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 64
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 122 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 177
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 64
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 122 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 177
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 62
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 175
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMAN 94
Q+K+ F +G+G FG V+ + A+K L + + + +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 95 VNVCHENLVKLHGGCI--DGPCRILVYDYMPNNSLS---QTLLGEEKRRAKFGWKARREI 149
+++ E+ H C V +Y+ L Q+ + RA F EI
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF---YAAEI 127
Query: 150 IMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT--THISTR 207
I+G L ++H + +V+RD+K NILLD++ + KI+DFG+ K EN +
Sbjct: 128 ILG----LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNX 177
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTA 247
GT Y+APE + + D +SFGVLL E++ G++
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 65
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 178
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 64
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 122 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 177
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 61
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 174
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 63
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 176
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 63
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 121 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 176
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 62
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 173
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 65
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 178
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 63
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 176
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 61
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 174
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 62
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 175
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 62
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 175
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 48 NKIGEGGFGSVYKG---RLQDGTIVAVKVLSVESKQGEKEF-MSEVASMANVNVCHENLV 103
KIG+G FG V+KG R Q +VA+K++ +E + E E E+ ++ + + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQ--KVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY--VT 68
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
K +G + ++ +Y+ S L + I+ I +GL Y+H E
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSE 123
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
+ +HRDIK +N+LL ++ K++DFG++ + +T V GT ++APE
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQS 179
Query: 224 RLTRKSDVYSFGVLLLEIVSG 244
K+D++S G+ +E+ G
Sbjct: 180 AYDSKADIWSLGITAIELARG 200
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 83
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T Y A
Sbjct: 143 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 13/210 (6%)
Query: 43 GFRWSN--KIGEGGFGSVYKG--RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V L + K+ E + + + E+ +
Sbjct: 27 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 84
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
HEN++ + I P + D L +T L + + + I RGL
Sbjct: 85 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 143
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTLGYLA 216
YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T Y A
Sbjct: 144 YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
PE ++ + T+ D++S G +L E++S R
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 44 FRWSNKIGEGGFGSVYKG---RLQDGTIVAVKVLSVESKQGEKEF-MSEVASMANVNVCH 99
F KIG+G FG V+KG R Q +VA+K++ +E + E E E+ ++ + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQ--KVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
+ K +G + ++ +Y+ S L + I+ I +GL Y
Sbjct: 87 --VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDY 139
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY 219
+H E + +HRDIK +N+LL ++ K++DFG++ + +T V GT ++APE
Sbjct: 140 LHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEV 195
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSGR 245
K+D++S G+ +E+ G
Sbjct: 196 IKQSAYDSKADIWSLGITAIELARGE 221
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 61
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + +T + + + + + +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDL--KTFM-DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 172
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 65
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKAR--REIIMGIGRGLA 158
N+VKL LV+++ L Q L A G + + + +GLA
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPE 218
+ H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVES--KQGEKEFMS-EVASMANVNVCH 99
F++ +GEG F + R L A+K+L K+ + +++ E M+ ++ H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--H 89
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
VKL+ D Y N L + + ++ F R I L Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEY 145
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK-LFPENTTHISTRVAGTLGYLAPE 218
+H + ++HRD+K NILL+++ + +I+DFG +K L PE+ + GT Y++PE
Sbjct: 146 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 219 YAISGRLTRKSDVYSFGVLLLEIVSG 244
+ SD+++ G ++ ++V+G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 43/256 (16%)
Query: 3 SIFSCFSFPSRVSAENTIGGEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGR 62
S+ S SFP + S + E + + QL+I IG+G FG VY GR
Sbjct: 7 SLLSARSFPRKASQTSIFLQEWDI------PFEQLEIG-------ELIGKGRFGQVYHGR 53
Query: 63 LQDGTIVAVKVLSVESKQGE--KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYD 120
VA++++ +E + K F EV MA HEN+V G C+ P ++
Sbjct: 54 WHGE--VAIRLIDIERDNEDQLKAFKREV--MAYRQTRHENVVLFMGACMSPPHLAIITS 109
Query: 121 YMPNNSLSQTLLGEEKRRAK--FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 178
+L + R AK R+I I +G+ Y+H + ++H+D+K+ N+
Sbjct: 110 LCKGRTLYSVV-----RDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNV 161
Query: 179 LLDQNFNPKISDFGL---SKLFPENTTHISTRVA-GTLGYLAPEYAISGR---------L 225
D N I+DFGL S + R+ G L +LAPE
Sbjct: 162 FYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPF 220
Query: 226 TRKSDVYSFGVLLLEI 241
++ SDV++ G + E+
Sbjct: 221 SKHSDVFALGTIWYEL 236
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 43 GFRWSN--KIGEGGFGSVYKGRLQDGTI-VAVKVLS-VESKQGEKEFMSEVASMANVNVC 98
G R++N IGEG +G V + VA+K +S E + + + E+ +
Sbjct: 42 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 99
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARRE----IIMGIG 154
HEN++ I+ R + M + L L+G + + + + I
Sbjct: 100 HENIIG-----INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS--TRVAGTL 212
RGL YIH +V+HRD+K SN+LL+ + KI DFGL+++ + H T T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 213 GYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGR 245
Y APE ++ + T+ D++S G +L E++S R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 62
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKAR--REIIMGIGRGLA 158
N+VKL LV+++ L Q L A G + + + +GLA
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPE 218
+ H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
KIG+G G+VY + G VA++ ++++ + ++ ++E+ M + N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK--NPNIVNYLD 85
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
+ G +V +Y+ SL+ + + R + + L ++H
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---Q 137
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HR+IK+ NILL + + K++DFG +++ PE + + + GT ++APE
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYG 195
Query: 227 RKSDVYSFGVLLLEIVSG 244
K D++S G++ +E++ G
Sbjct: 196 PKVDIWSLGIMAIEMIEG 213
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+ L E++ + E++ + +N H
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN--HP 62
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 173
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 17/228 (7%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+ L E++ + E++ + +N H
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN--HP 61
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYLAPE 218
H V+HRD+K N+L++ K++DFGL++ F P T T TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPE 172
Query: 219 YAISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 220
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVL---------SVESKQGEKEFMSEVASMANVNVCH 99
IG G + V RL+ I A+KV+ ++ Q EK + ++ H
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-------H 80
Query: 100 ENLVKLHGGCIDGPCRIL-VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
LV LH C R+ V +Y+ L + +R+ K + R I L
Sbjct: 81 PFLVGLHS-CFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--LFPENTTHISTRVAGTLGYLA 216
Y+HE +++RD+K N+LLD + K++D+G+ K L P +TT + GT Y+A
Sbjct: 136 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 189
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
PE D ++ GVL+ E+++GR+ D
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVL---------SVESKQGEKEFMSEVASMANVNVCH 99
IG G + V RL+ I A+KV+ ++ Q EK + ++ H
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-------H 69
Query: 100 ENLVKLHGGCIDGPCRIL-VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
LV LH C R+ V +Y+ L + +R+ K + R I L
Sbjct: 70 PFLVGLHS-CFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--LFPENTTHISTRVAGTLGYLA 216
Y+HE +++RD+K N+LLD + K++D+G+ K L P +TT + GT Y+A
Sbjct: 125 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 178
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
PE D ++ GVL+ E+++GR+ D
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC--HENLVKLH 106
+GEG F K + AVK++S K+ E E+ ++ +C H N+VKLH
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS---KRMEANTQKEITAL---KLCEGHPNIVKLH 72
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
D LV + + L + + K++ F I+ + ++++H+
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVSHMHD---V 125
Query: 167 HVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
VVHRD+K N+L + N KI DFG ++L P + + T TL Y APE
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQN 184
Query: 224 RLTRKSDVYSFGVLLLEIVSGR 245
D++S GV+L ++SG+
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQ 206
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVL---------SVESKQGEKEFMSEVASMANVNVCH 99
IG G + V RL+ I A+KV+ ++ Q EK + ++ H
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-------H 65
Query: 100 ENLVKLHGGCIDGPCRIL-VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
LV LH C R+ V +Y+ L + +R+ K + R I L
Sbjct: 66 PFLVGLHS-CFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--LFPENTTHISTRVAGTLGYLA 216
Y+HE +++RD+K N+LLD + K++D+G+ K L P +TT + GT Y+A
Sbjct: 121 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 174
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
PE D ++ GVL+ E+++GR+ D
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 31/236 (13%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KE 84
+ ++ + + + +G G FG V + + VAVK+L + E +
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 85 FMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
MSE+ + ++ H N+V L G C GP ++V ++ +LS L KR
Sbjct: 77 LMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYL--RSKRNEFVP 132
Query: 143 WKARREII--------------MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
+K E + + +G+ ++ +HRD+ NILL + KI
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKI 189
Query: 189 SDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
DFGL++ ++ ++ A L ++APE T +SDV+SFGVLL EI S
Sbjct: 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 31/236 (13%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KE 84
+ ++ + + + +G G FG V + + VAVK+L + E +
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 85 FMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
MSE+ + ++ H N+V L G C GP ++V ++ +LS L KR
Sbjct: 114 LMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYL--RSKRNEFVP 169
Query: 143 WKARREII--------------MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
+K E + + +G+ ++ +HRD+ NILL + KI
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKI 226
Query: 189 SDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
DFGL++ ++ ++ A L ++APE T +SDV+SFGVLL EI S
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
IG G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ K++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 13/226 (5%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKV--LSVESKQGEKEFMSEVASMANVNVCHE 100
F+ KIGEG +G VYK R + G +VA+K L E++ + E++ + +N H
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 65
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N+VKL LV++++ + L + + + + + + +GLA+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHV-DQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H V+HRD+K N+L++ K++DFGL++ F V TL Y APE
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 178
Query: 221 ISGRLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ + + D++S G + E+V+ R D ++ + + + G
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 29/246 (11%)
Query: 23 EQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGT-IVAVKVLS---VES 78
E+I+K I L++ + IG G FG V R + + A+K+LS +
Sbjct: 61 EKIVKKIRG-----LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIK 115
Query: 79 KQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE--K 136
+ F E MA N +V+L D +V +YMP L + + +
Sbjct: 116 RSDSAFFWEERDIMAFAN--SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE 173
Query: 137 RRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-K 195
+ AKF E+++ L IH ++HRD+K N+LLD++ + K++DFG K
Sbjct: 174 KWAKF---YTAEVVLA----LDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMK 223
Query: 196 LFPENTTHISTRVAGTLGYLAPEYAIS----GRLTRKSDVYSFGVLLLEIVSGRTAVDFD 251
+ H T V GT Y++PE S G R+ D +S GV L E++ G T D
Sbjct: 224 MDETGMVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 282
Query: 252 VQLGEY 257
+G Y
Sbjct: 283 SLVGTY 288
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 31/236 (13%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KE 84
+ ++ + + + +G G FG V + + VAVK+L + E +
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 85 FMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
MSE+ + ++ H N+V L G C GP ++V ++ +LS L KR
Sbjct: 79 LMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYL--RSKRNEFVP 134
Query: 143 WKARREII--------------MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
+K E + + +G+ ++ +HRD+ NILL + KI
Sbjct: 135 YKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKI 191
Query: 189 SDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
DFGL++ ++ ++ A L ++APE T +SDV+SFGVLL EI S
Sbjct: 192 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRL--QDGTIV--AVKVLSVE--SKQGEKEFMSEVASM 92
I F +G+G FGSV + +L +DG+ V AVK+L + + +EF+ E A M
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 93 ANVNVCHENLVKLHGGCIDG------PCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKAR 146
+ H ++ KL G + P +++ +M + L LL F +
Sbjct: 80 KEFD--HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQ 137
Query: 147 REI--IMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTH 203
+ ++ I G+ Y+ + +HRD+ N +L ++ ++DFGLS K++ +
Sbjct: 138 TLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194
Query: 204 ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
+ +LA E T SDV++FGV + EI++
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 28/298 (9%)
Query: 21 GGEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESK 79
GG+Q+ + + F N ++ + ++G+G F V + G A K+++ + K
Sbjct: 9 GGQQMGRG-SEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-K 66
Query: 80 QGEKEFMS-EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRR 138
++F E + + H N+V+LH + LV+D + L + ++ R
Sbjct: 67 LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----R 122
Query: 139 AKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN---PKISDFGLSK 195
+ I I +AY H +VHR++K N+LL K++DFGL+
Sbjct: 123 EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA- 178
Query: 196 LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV-DFD--- 251
N + AGT GYL+PE ++ D+++ GV+L ++ G D D
Sbjct: 179 -IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 237
Query: 252 ----VQLGEYHLVDKAWGMYNSKELMNLVDPMLYGNFPENE--AIRFLKVGLLCVQEK 303
++ G Y W + E +L+D ML N P+ A + LKV +C +E+
Sbjct: 238 LYAQIKAGAYDYPSPEWDTV-TPEAKSLIDSMLTVN-PKKRITADQALKVPWICNRER 293
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 56/291 (19%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGGC 109
+G+G +G V++G L G VAVK+ S + E+ + E V + H+N++
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIAS- 70
Query: 110 IDGPCR------ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
D R L+ Y + SL L +R + + GLA++H E
Sbjct: 71 -DMTSRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLHVE 124
Query: 164 I-----QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHI----STRVAGTLGY 214
I +P + HRD K+ N+L+ N I+D GL+ + + + ++ + RV GT Y
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRY 183
Query: 215 LAPEYAISGRLT------RKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYN 268
+APE T + +D+++FG++L EI + RT V+ V+ +Y
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI-ARRTIVNGIVE--DYR---------- 230
Query: 269 SKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNG 319
P Y P + + +K ++CV +++ P A +++G
Sbjct: 231 ---------PPFYDVVPNDPSFEDMK-KVVCVDQQTPTIPNRLAADPVLSG 271
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 31/236 (13%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KE 84
+ ++ + + + +G G FG V + + VAVK+L + E +
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 85 FMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
MSE+ + ++ H N+V L G C GP ++V ++ +LS L KR
Sbjct: 77 LMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYL--RSKRNEFVP 132
Query: 143 WKARREII--------------MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
+K E + + +G+ ++ +HRD+ NILL + KI
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKI 189
Query: 189 SDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
DFGL++ ++ + A L ++APE T +SDV+SFGVLL EI S
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGR----LQDGTIVAVKVLSVESKQGEKEFMSEVASMA 93
KI F +G+GG+G V++ R G I A+KVL + + +
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 94 NV--NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
N+ V H +V L G L+ +Y+ L L +R F +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLA 128
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I L ++H Q +++RD+K NI+L+ + K++DFGL K + T ++ GT
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGT 184
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
+ Y+APE + R D +S G L+ ++++G
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGR----LQDGTIVAVKVLSVESKQGEKEFMSEVASMA 93
KI F +G+GG+G V++ R G I A+KVL + + +
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 94 NV--NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
N+ V H +V L G L+ +Y+ L L +R F +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLA 128
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
I L ++H Q +++RD+K NI+L+ + K++DFGL K + T ++ GT
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGT 184
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
+ Y+APE + R D +S G L+ ++++G
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 31/236 (13%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KE 84
+ ++ + + + +G G FG V + + VAVK+L + E +
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 85 FMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
MSE+ + ++ H N+V L G C GP ++V ++ +LS L KR
Sbjct: 68 LMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYL--RSKRNEFVP 123
Query: 143 WKARREII--------------MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
+K E + + +G+ ++ +HRD+ NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKI 180
Query: 189 SDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
DFGL++ ++ + A L ++APE T +SDV+SFGVLL EI S
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 50 IGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENL 102
+G G FG V + + VAVK+L + E + MSE+ + ++ H N+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-HLNV 94
Query: 103 VKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII---------- 150
V L G C GP ++V ++ +LS L KR +K ++
Sbjct: 95 VNLLGACTKPGGPLMVIV-EFCKFGNLSTYL--RSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 151 ---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+ +G+ ++ +HRD+ NILL + KI DFGL++ ++ +
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 208 VAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
A L ++APE T +SDV+SFGVLL EI S
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVL---------SVESKQGEKEFMSEVASMANVNVCH 99
IG G + V RL+ I A++V+ ++ Q EK + ++ H
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN-------H 112
Query: 100 ENLVKLHGGCIDGPCRIL-VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
LV LH C R+ V +Y+ L + +R+ K + R I L
Sbjct: 113 PFLVGLHS-CFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--LFPENTTHISTRVAGTLGYLA 216
Y+HE +++RD+K N+LLD + K++D+G+ K L P +TT + GT Y+A
Sbjct: 168 YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIA 221
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
PE D ++ GVL+ E+++GR+ D
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 35/238 (14%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KE 84
+ ++ + + + +G G FG V + + VAVK+L + E +
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 85 FMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
MSE+ + ++ H N+V L G C GP ++V ++ +LS L KR
Sbjct: 77 LMSELKILIHIGH-HLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYL--RSKRNEFVP 132
Query: 143 WKARREII--------------MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
+K E + + +G+ ++ +HRD+ NILL + KI
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKI 189
Query: 189 SDFGLSKLF---PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
DFGL++ P+ R+ L ++APE T +SDV+SFGVLL EI S
Sbjct: 190 CDFGLARDIYKDPDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 48 NKIGEGGFGSVYKGRLQDGT--IVAVKVLSVESKQGEKEF-MSEVASMANVNVCHENLVK 104
++IG+G FG VYKG + + T +VA+K++ +E + E E E+ ++ + + + +
Sbjct: 25 DRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY--ITR 81
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
G + ++ +Y+ S + LL + REI+ +GL Y+H E
Sbjct: 82 YFGSYLKSTKLWIIMEYLGGGS-ALDLLKPGPLEETYIATILREIL----KGLDYLHSER 136
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+ +HRDIK +N+LL + + K++DFG++ +T GT ++APE
Sbjct: 137 K---IHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
K+D++S G+ +E+ G
Sbjct: 193 YDFKADIWSLGITAIELAKG 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 49 KIGEGGFGSVYKG---RLQDGTIVAVKVLSVESKQGEKEF-MSEVASMANVNVCHENLVK 104
KIG+G FG V+KG R Q +VA+K++ +E + E E E+ ++ + + + K
Sbjct: 29 KIGKGSFGEVFKGIDNRTQ--KVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY--VTK 84
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
+G + ++ +Y+ S L + I+ I +GL Y+H E
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSEK 139
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+ +HRDIK +N+LL ++ K++DFG++ +T GT ++APE
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIKQSA 195
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
K+D++S G+ +E+ G
Sbjct: 196 YDSKADIWSLGITAIELARG 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 21/202 (10%)
Query: 50 IGE-GGFGSVYKGRLQDGTIVAV-KVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
IGE G FG VYK + ++ +++A KV+ +S++ +++M E+ +A+ + H N+VKL
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKLLD 74
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
++ ++ ++ +L E+ + + + L Y+H+
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERPLTE---SQIQVVCKQTLDALNYLHDN---K 128
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENT-THISTR--VAGTLGYLAPEYAISGR 224
++HRD+K NIL + + K++DFG+S +NT T I R GT ++APE +
Sbjct: 129 IIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 225 -----LTRKSDVYSFGVLLLEI 241
K+DV+S G+ L+E+
Sbjct: 186 SKDRPYDYKADVWSLGITLIEM 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 17/201 (8%)
Query: 48 NKIGEGGFGSVYKG---RLQDGTIVAVKVLSVESKQGEKEF-MSEVASMANVNVCHENLV 103
KIG+G FG V+KG R Q +VA+K++ +E + E E E+ ++ + + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQ--KVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY--VT 68
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
K +G + ++ +Y+ S L + I+ I +GL Y+H E
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLHSE 123
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
+ +HRDIK +N+LL ++ K++DFG++ +T GT ++APE
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 224 RLTRKSDVYSFGVLLLEIVSG 244
K+D++S G+ +E+ G
Sbjct: 180 AYDSKADIWSLGITAIELARG 200
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEF---MSEVASMANVNVCHENLVKL 105
+G G FG V + ++ G A+K+L + KE ++E + VN LVKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF--LVKL 106
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
D +V +Y P + L +R +F R I Y+H
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---S 159
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+++RD+K N+++DQ K++DFGL+K T + GT YLAPE +S
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL----CGTPEYLAPEIILSKGY 215
Query: 226 TRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQD-GTIVAVKVL---------SVESKQGEKEFMS 87
++ + F + +G+G FG V R+++ G + AVKVL VE EK +S
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 88 EVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARR 147
+ H L +L C P R+ N L+ ++ +F R
Sbjct: 79 LARN-------HPFLTQLFC-CFQTPDRLFFVMEFVNGG---DLMFHIQKSRRFDEARAR 127
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
I L ++H++ +++RD+K N+LLD + K++DFG+ K N +T
Sbjct: 128 FYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT- 183
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
GT Y+APE D ++ GVLL E++ G +
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 49 KIGEGGFGSVYKGRLQDG-TIVAVKVLSVESKQGEKEFMSEVASMANVNVC------HEN 101
KIGEG +G+V+K + ++ IVA+K + ++ V S A +C H+N
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD------EGVPSSALREICLLKELKHKN 62
Query: 102 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
+V+LH LV+++ + L + + + + + + +GL + H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-DQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 221
+V+HRD+K N+L+++N K++DFGL++ F S V TL Y P+
Sbjct: 119 SR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLF 174
Query: 222 SGRLTRKS-DVYSFGVLLLEIVSGRTAV----DFDVQL 254
+L S D++S G + E+ + + D D QL
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQL 212
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%), Gaps = 43/224 (19%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHGG 108
+G+G FG V K R D A+K + +++ +SEV +A++N H+ +V+ +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLN--HQYVVRYYAA 70
Query: 109 CID-------------GPCRILVYDYMPNNSLSQTLLGEE--KRRAKFGWKARREIIMGI 153
++ + +Y N +L + E ++R ++ W+ R+I+
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-WRLFRQIL--- 126
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK--------------LFPE 199
L+YIH + ++HR++K NI +D++ N KI DFGL+K P
Sbjct: 127 -EALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 200 NTTHISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFGVLLLEIV 242
++ ++++ + GT Y+A E +G K D YS G++ E +
Sbjct: 183 SSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 50 IGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENL 102
+G G FG V + + VAVK+L + E + MSE+ + ++ H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH-HLNV 93
Query: 103 VKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
V L G C GP ++V ++ +LS L KR +K + + + + Y
Sbjct: 94 VNLLGACTKPGGPLMVIV-EFCKFGNLSTYL--RSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 161 HEEIQ-------PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TL 212
+ + +HRD+ NILL + KI DFGL++ ++ ++ A L
Sbjct: 151 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 213 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
++APE T +SDV+SFGVLL EI S
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 31/236 (13%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KE 84
+ ++ + + + +G G FG V + + VAVK+L + E +
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 85 FMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
MSE+ + ++ H N+V L G C GP +++ ++ +LS L KR
Sbjct: 68 LMSELKILIHIGH-HLNVVNLLGACTKPGGPL-MVITEFCKFGNLSTYL--RSKRNEFVP 123
Query: 143 WKARREII--------------MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
+K E + + +G+ ++ +HRD+ NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKI 180
Query: 189 SDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
DFGL++ ++ ++ A L ++APE T +SDV+SFGVLL EI S
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 31/236 (13%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KE 84
+ ++ + + + +G G FG V + + VAVK+L + E +
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 85 FMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
MSE+ + ++ H N+V L G C GP +++ ++ +LS L KR
Sbjct: 68 LMSELKILIHIGH-HLNVVNLLGACTKPGGPL-MVITEFCKFGNLSTYL--RSKRNEFVP 123
Query: 143 WKARREII--------------MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
+K E + + +G+ ++ +HRD+ NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKI 180
Query: 189 SDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
DFGL++ ++ ++ A L ++APE T +SDV+SFGVLL EI S
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 50 IGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KEFMSEVASMANVNVCHENL 102
+G G FG V + + VAVK+L + E + MSE+ + ++ H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG-HHLNV 93
Query: 103 VKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG-------- 152
V L G C GP ++V ++ +LS L KR +K + +
Sbjct: 94 VNLLGACTKPGGPLMVIV-EFCKFGNLSTYL--RSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 153 --IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
+ +G+ ++ +HRD+ NILL + KI DFGL++ ++ ++ A
Sbjct: 151 FQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 211 -TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
L ++APE T +SDV+SFGVLL EI S
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 49 KIGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G G FG V++ G A K + + ++ E+ +M+ + H LV LH
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR--HPTLVNLHD 221
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
D +++Y++M L + + E + ++ E + + +GL ++HE +
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE---DEAVEYMRQVCKGLCHMHEN---N 275
Query: 168 VVHRDIKTSNILL--DQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGR 224
VH D+K NI+ ++ K+ DFGL+ L P+ + ++T GT + APE A
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKP 332
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ +D++S GVL ++SG
Sbjct: 333 VGYYTDMWSVGVLSYILLSG 352
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 50 IGEGGFGSVYKGRLQDGT-IVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+G+GGF ++ D + A K++ S+ K ++E MS S+ ++ H+++V H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR-SLAHQHVVGFH 83
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G D +V + SL L KRR R + I G Y+H
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRD+K N+ L+++ KI DFGL+ + T + GT Y+APE +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 195
Query: 227 RKSDVYSFGVLLLEIVSGRTAVD 249
+ DV+S G ++ ++ G+ +
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVA-SMANV 95
K+ N F + +G+G FG V R + G A+K+L E + E V S
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE---KRRAKFGWKARREIIMG 152
N H L L V +Y L L E + RA+F + A EI+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA--EIV-- 115
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL 212
L Y+H VV+RDIK N++LD++ + KI+DFGL K + + T GT
Sbjct: 116 --SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTP 169
Query: 213 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
YLAPE R D + GV++ E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 50 IGEGGFGSVYKGRLQDGT-IVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+G+GGF ++ D + A K++ S+ K ++E MS S+ ++ H+++V H
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR-SLAHQHVVGFH 87
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G D +V + SL L KRR R + I G Y+H
Sbjct: 88 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 140
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRD+K N+ L+++ KI DFGL+ + T + GT Y+APE +
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 199
Query: 227 RKSDVYSFGVLLLEIVSGRTAVD 249
+ DV+S G ++ ++ G+ +
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 49 KIGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G G FG V++ G A K + + ++ E+ +M+ + H LV LH
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR--HPTLVNLHD 115
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
D +++Y++M L + + E + ++ E + + +GL ++HE +
Sbjct: 116 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE---DEAVEYMRQVCKGLCHMHEN---N 169
Query: 168 VVHRDIKTSNILL--DQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGR 224
VH D+K NI+ ++ K+ DFGL+ L P+ + ++T GT + APE A
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKP 226
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ +D++S GVL ++SG
Sbjct: 227 VGYYTDMWSVGVLSYILLSG 246
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 50 IGEGGFGSVYKGRLQDGT-IVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+G+GGF ++ D + A K++ S+ K ++E MS S+ ++ H+++V H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR-SLAHQHVVGFH 83
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G D +V + SL L KRR R + I G Y+H
Sbjct: 84 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRD+K N+ L+++ KI DFGL+ + T + GT Y+APE +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 195
Query: 227 RKSDVYSFGVLLLEIVSGRTAVD 249
+ DV+S G ++ ++ G+ +
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLS-VESKQGEKEFMSEVASMANVNVCHENLVK--- 104
IGEG +G V T VA+K +S E + + + E+ + HEN++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR--HENVIGIRD 108
Query: 105 -LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
L ++ + + + L + L ++ + + I RGL YIH
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGLKYIHSA 163
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PE-NTTHISTRVAGTLGYLAPEYAI 221
+V+HRD+K SN+L++ + KI DFGL+++ PE + T T T Y APE +
Sbjct: 164 ---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 222 SGR-LTRKSDVYSFGVLLLEIVSGR 245
+ + T+ D++S G +L E++S R
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVA-SMANV 95
K+ N F + +G+G FG V R + G A+K+L E + E V S
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE---KRRAKFGWKARREIIMG 152
N H L L V +Y L L E + RA+F + A EI+
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA--EIV-- 118
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL 212
L Y+H VV+RDIK N++LD++ + KI+DFGL K + + T GT
Sbjct: 119 --SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTP 172
Query: 213 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
YLAPE R D + GV++ E++ GR
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVA-SMANV 95
K+ N F + +G+G FG V R + G A+K+L E + E V S
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE---KRRAKFGWKARREIIMG 152
N H L L V +Y L L E + RA+F + A EI+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA--EIV-- 115
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL 212
L Y+H VV+RDIK N++LD++ + KI+DFGL K + + T GT
Sbjct: 116 --SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTP 169
Query: 213 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
YLAPE R D + GV++ E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 91
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 144
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT----WTLCGTPEYLAPEIILSKG 200
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 201 YNKAVDWWALGVLIYEMAAG 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 49/254 (19%)
Query: 19 TIGGEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQD-GTIVAVKVLSVE 77
TIGG++ IN ++G G G V+K R + G ++AVK +
Sbjct: 14 TIGGQRYQAEINDLEN------------LGEMGSGTCGQVWKMRFRKTGHVIAVKQMR-- 59
Query: 78 SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS---LSQTLLG- 133
+ G KE + + +++V ++K H D P + + N+ ++ L+G
Sbjct: 60 -RSGNKEENKRI--LMDLDV----VLKSH----DCPYIVQCFGTFITNTDVFIAMELMGT 108
Query: 134 --EEKRRAKFGWKARR---EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
E+ ++ G R ++ + I + L Y+ E + V+HRD+K SNILLD+ K+
Sbjct: 109 CAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKL 166
Query: 189 SDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR-----KSDVYSFGVLLLEIVS 243
DFG+S ++ R AG Y+APE T+ ++DV+S G+ L+E+ +
Sbjct: 167 CDFGISGRLVDDKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT 224
Query: 244 GR-----TAVDFDV 252
G+ DF+V
Sbjct: 225 GQFPYKNCKTDFEV 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y P + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+++DQ K++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT----WTLCGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 120/246 (48%), Gaps = 20/246 (8%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSV----ESKQG-EKEFMSEVASMANVNVCHENLV 103
+GEG F +VYK R ++ IVA+K + + E+K G + + E+ + ++ H N++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS--HPNII 75
Query: 104 KLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEE 163
L LV+D+M + ++ ++ + ++M + +GL Y+H
Sbjct: 76 GLLDAFGHKSNISLVFDFMETD---LEVIIKDNSLVLTPSHIKAYMLMTL-QGLEYLH-- 129
Query: 164 IQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
Q ++HRD+K +N+LLD+N K++DFGL+K F +V T Y APE
Sbjct: 130 -QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGA 187
Query: 224 RLTRKS-DVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKE---LMNLVDPM 279
R+ D+++ G +L E++ + D L + + + G ++ + +L D +
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 247
Query: 280 LYGNFP 285
+ +FP
Sbjct: 248 TFKSFP 253
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 50 IGEGGFGSVY--KGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
+G G F V+ K RL G + A+K + + +E+A + + HEN+V L
Sbjct: 17 LGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIK--HENIVTLED 73
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPH 167
LV + L +L R + K +I + + Y+HE
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRIL----ERGVYTEKDASLVIQQVLSAVKYLHEN---G 126
Query: 168 VVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+VHRD+K N+L ++N I+DFGLSK+ I + GT GY+APE
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
++ D +S GV+ ++ G
Sbjct: 184 YSKAVDCWSIGVITYILLCG 203
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 31/236 (13%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KE 84
+ ++ + + + +G G FG V + + VAVK+L + E +
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 85 FMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
MSE+ + ++ H N+V L G C GP +++ ++ +LS L KR
Sbjct: 68 LMSELKILIHIGH-HLNVVNLLGACTKPGGPL-MVITEFCKFGNLSTYL--RSKRNEFVP 123
Query: 143 WKARREII--------------MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKI 188
+K E + + +G+ ++ +HRD+ NILL + KI
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKI 180
Query: 189 SDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
DFGL++ ++ + A L ++APE T +SDV+SFGVLL EI S
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEF---MSEVASMANVNVCHENLVKL 105
+G G FG V + ++ G A+K+L + KE ++E + VN LVKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF--LVKL 106
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
D +V +Y P + L +R +F R I Y+H
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH---S 159
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+++RD+K N+++DQ +++DFGL+K T + GT YLAPE +S
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL----CGTPEYLAPEIILSKGY 215
Query: 226 TRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 76
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + AK + +I I
Sbjct: 77 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQI 130
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 131 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 183
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 49 KIGEGGFGSVYKG-RLQDGTIVAVKVL------SVESKQGEKEFM--SEVASMANVNVCH 99
K+G+G +G V+K + G +VAVK + S ++++ +E M +E++ H
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG-------H 68
Query: 100 ENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGL 157
EN+V L R LV+DYM +T L R ++ ++ + + +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYM------ETDLHAVIRANILEPVHKQYVVYQLIKVI 122
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF--------------PENTTH 203
Y+H ++HRD+K SNILL+ + K++DFGLS+ F ENT +
Sbjct: 123 KYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 204 ------ISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFGVLLLEIVSGR 245
I T T Y APE + S + T+ D++S G +L EI+ G+
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 41 TNGFRWSNKIGEGGFGSVY--KGRLQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
++ ++ K+G G +G V K +L G A+K++ SV + + EVA + +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
+ H N++KL+ D LV + L ++ R KF I+ +
Sbjct: 62 D--HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII----LRQKFSEVDAAVIMKQVLS 115
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTL 212
G Y+H+ ++VHRD+K N+LL+ KI DFGLS F E + R+ GT
Sbjct: 116 GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERL-GTA 170
Query: 213 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
Y+APE + + K DV+S GV+L ++ G
Sbjct: 171 YYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y P + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+++DQ K++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 41 TNGFRWSNKIGEGGFGSVY--KGRLQDGTIVAVKVL---SVESKQGEKEFMSEVASMANV 95
++ ++ K+G G +G V K +L G A+K++ SV + + EVA + +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
+ H N++KL+ D LV + L ++ R KF I+ +
Sbjct: 79 D--HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII----LRQKFSEVDAAVIMKQVLS 132
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNP---KISDFGLSKLFPENTTHISTRVAGTL 212
G Y+H+ ++VHRD+K N+LL+ KI DFGLS F E + R+ GT
Sbjct: 133 GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERL-GTA 187
Query: 213 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
Y+APE + + K DV+S GV+L ++ G
Sbjct: 188 YYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 29/234 (12%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSVYKG------RLQDGTIVAVKVLSVESKQGE-KE 84
+ ++ + + + +G G FG V + + VAVK+L + E +
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 85 FMSEVASMANVNVCHENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
MSE+ + ++ H N+V L G C GP ++V ++ +LS L KR
Sbjct: 79 LMSELKILIHIG-HHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYL--RSKRNEFVP 134
Query: 143 WKAR---------REII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISD 190
+K +I + +G+ ++ +HRD+ NILL + KI D
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICD 191
Query: 191 FGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
FGL++ ++ + A L ++APE T +SDV+SFGVLL EI S
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 50 IGEGGFGSVYKGRLQDGT-IVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+G+GGF ++ D + A K++ S+ K ++E MS S+ ++ H+++V H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR-SLAHQHVVGFH 81
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G D +V + SL L KRR R + I G Y+H
Sbjct: 82 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 134
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRD+K N+ L+++ KI DFGL+ E + GT Y+APE +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 227 RKSDVYSFGVLLLEIVSGRTAVD 249
+ DV+S G ++ ++ G+ +
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 20/227 (8%)
Query: 25 ILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVY---KGRLQDGTIVAVKVLSVESKQG 81
+L + + Q + + + + + +G G F V R Q +VA+K ++ E+ +G
Sbjct: 1 MLGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQ--KLVAIKCIAKEALEG 58
Query: 82 EKEFM-SEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAK 140
++ M +E+A + + H N+V L G L+ + L ++ +
Sbjct: 59 KEGSMENEIAVLHKIK--HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV----EKGF 112
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQNFNPKISDFGLSKLF 197
+ + +I + + Y+H+ +VHRD+K N+L LD++ ISDFGLSK+
Sbjct: 113 YTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM- 168
Query: 198 PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
E+ + + GT GY+APE ++ D +S GV+ ++ G
Sbjct: 169 -EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 50 IGEGGFGSVYKGRLQDGT-IVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+G+GGF ++ D + A K++ S+ K ++E MS S+ ++ H+++V H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR-SLAHQHVVGFH 105
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G D +V + SL L KRR R + I G Y+H
Sbjct: 106 GFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 158
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRD+K N+ L+++ KI DFGL+ E + GT Y+APE +
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 227 RKSDVYSFGVLLLEIVSGRTAVD 249
+ DV+S G ++ ++ G+ +
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVA-SMANV 95
K+ N F + +G+G FG V R + G A+K+L E + E V S
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
N H L L V +Y L L R F + R I
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 116
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST--RVAGTLG 213
L Y+H VV+RDIK N++LD++ + KI+DFGL K E + +T GT
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPE 170
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
YLAPE R D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 41 TNGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMS-EVASMANVNVC 98
++ + ++G+G F V + G A K+++ + K ++F E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICRKLQ 63
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
H N+V+LH + LV+D + L + ++ R + I I +A
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIA 119
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFN---PKISDFGLSKLFPENTTHISTRVAGTLGYL 215
Y H +VHR++K N+LL K++DFGL+ N + AGT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV-DFD-------VQLGEYHLVDKAWGMY 267
+PE ++ D+++ GV+L ++ G D D ++ G Y W
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 234
Query: 268 NSKELMNLVDPMLYGNFPENE--AIRFLKVGLLCVQEK 303
+ E +L+D ML N P+ A + LKV +C +E+
Sbjct: 235 -TPEAKSLIDSMLTVN-PKKRITADQALKVPWICNRER 270
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 50 IGEGGFGSVYKGRLQDGT-IVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+G+GGF ++ D + A K++ S+ K ++E MS S+ ++ H+++V H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR-SLAHQHVVGFH 107
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
G D +V + ++LL KRR R + I G Y+H
Sbjct: 108 GFFEDNDFVFVVLEL----CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 160
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRD+K N+ L+++ KI DFGL+ E + GT Y+APE +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 227 RKSDVYSFGVLLLEIVSGRTAVD 249
+ DV+S G ++ ++ G+ +
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 93/215 (43%), Gaps = 20/215 (9%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVA-SMANV 95
K+ N F + +G+G FG V R + G A+K+L E + E V S
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE---KRRAKFGWKARREIIMG 152
N H L L V +Y L L E + RA+F EI+
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF---YGAEIV-- 120
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST--RVAG 210
L Y+H VV+RDIK N++LD++ + KI+DFGL K E + +T G
Sbjct: 121 --SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCG 172
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
T YLAPE R D + GV++ E++ GR
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 98
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 151
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 207
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 208 YNKAVDWWALGVLIYEMAAG 227
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVA-SMANV 95
K+ N F + +G+G FG V R + G A+K+L E + E V S
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE---KRRAKFGWKARREIIMG 152
N H L L V +Y L L E + RA+F + A EI+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA--EIV-- 115
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST--RVAG 210
L Y+H VV+RDIK N++LD++ + KI+DFGL K E + +T G
Sbjct: 116 --SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCG 167
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
T YLAPE R D + GV++ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 41 TNGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMS-EVASMANVNVC 98
++ + ++G+G F V + G A K+++ + K ++F E + +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICRKLQ 62
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
H N+V+LH + LV+D + L + ++ R + I I +A
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIA 118
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFN---PKISDFGLSKLFPENTTHISTRVAGTLGYL 215
Y H +VHR++K N+LL K++DFGL+ N + AGT GYL
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 173
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV-DFD-------VQLGEYHLVDKAWGMY 267
+PE ++ D+++ GV+L ++ G D D ++ G Y W
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 233
Query: 268 NSKELMNLVDPMLYGNFPENE--AIRFLKVGLLCVQEK 303
+ E +L+D ML N P+ A + LKV +C +E+
Sbjct: 234 -TPEAKSLIDSMLTVN-PKKRITADQALKVPWICNRER 269
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVA-SMANV 95
K+ N F + +G+G FG V R + G A+K+L E + E V S
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE---KRRAKFGWKARREIIMG 152
N H L L V +Y L L E + RA+F + A EI+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA--EIV-- 115
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST--RVAG 210
L Y+H VV+RDIK N++LD++ + KI+DFGL K E + +T G
Sbjct: 116 --SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCG 167
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
T YLAPE R D + GV++ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 49 KIGEGGFGSVYKGRLQDG-TIVAVKVLSVESKQGEKEFMSEVASMANVNVC------HEN 101
KIGEG +G+V+K + ++ IVA+K + ++ V S A +C H+N
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD------EGVPSSALREICLLKELKHKN 62
Query: 102 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
+V+LH LV+++ + L + + + + + + +GL + H
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-DQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 162 EEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 221
+V+HRD+K N+L+++N K+++FGL++ F S V TL Y P+
Sbjct: 119 SR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLF 174
Query: 222 SGRLTRKS-DVYSFGVLLLEIV-SGRTAV---DFDVQL 254
+L S D++S G + E+ +GR D D QL
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 34 YNQLKIATNGFRWSNKIGEGGFGSVY---KGRLQDGTIVAVKVLSVESKQGEKEFM-SEV 89
+ Q + + + + + +G G F V R Q +VA+K ++ E+ +G++ M +E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQ--KLVAIKCIAKEALEGKEGSMENEI 67
Query: 90 ASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI 149
A + + H N+V L G L+ + L ++ + + + +
Sbjct: 68 AVLHKIK--HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRL 121
Query: 150 IMGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQNFNPKISDFGLSKLFPENTTHIST 206
I + + Y+H+ +VHRD+K N+L LD++ ISDFGLSK+ E+ + +
Sbjct: 122 IFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLS 176
Query: 207 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
GT GY+APE ++ D +S GV+ ++ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQDGT-IVAVKVLSVES--KQGEKEFMSEVASM 92
++++ F IG G FG V ++++ I A+K+L+ K+ E E +
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 127
Query: 93 ANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTL------LGEEKRRAKFGWKAR 146
VN + + LH D LV DY L L L E+ R G
Sbjct: 128 L-VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG---- 182
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 206
E+++ I IH Q H VHRDIK N+LLD N + +++DFG ++ T S+
Sbjct: 183 -EMVLAIDS----IH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS 234
Query: 207 RVAGTLGYLAPEYAIS-----GRLTRKSDVYSFGVLLLEIVSGRT 246
GT Y++PE + G+ + D +S GV + E++ G T
Sbjct: 235 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 279
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+++DQ K++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 126
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 179
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 235
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 236 YNKAVDWWALGVLIYEMAAG 255
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQDGT-IVAVKVLSVES--KQGEKEFMSEVASM 92
++++ F IG G FG V ++++ I A+K+L+ K+ E E +
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 143
Query: 93 ANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTL------LGEEKRRAKFGWKAR 146
VN + + LH D LV DY L L L E+ R G
Sbjct: 144 L-VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG---- 198
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIST 206
E+++ I IH Q H VHRDIK N+LLD N + +++DFG ++ T S+
Sbjct: 199 -EMVLAIDS----IH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSS 250
Query: 207 RVAGTLGYLAPEYAIS-----GRLTRKSDVYSFGVLLLEIVSGRT 246
GT Y++PE + G+ + D +S GV + E++ G T
Sbjct: 251 VAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 295
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 34 YNQLKIATNGFRWSNKIGEGGFGSVY---KGRLQDGTIVAVKVLSVESKQGEKEFM-SEV 89
+ Q + + + + + +G G F V R Q +VA+K ++ E+ +G++ M +E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQ--KLVAIKCIAKEALEGKEGSMENEI 67
Query: 90 ASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI 149
A + + H N+V L G L+ + L ++ + + + +
Sbjct: 68 AVLHKIK--HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRL 121
Query: 150 IMGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQNFNPKISDFGLSKLFPENTTHIST 206
I + + Y+H+ +VHRD+K N+L LD++ ISDFGLSK+ E+ + +
Sbjct: 122 IFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLS 176
Query: 207 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
GT GY+APE ++ D +S GV+ ++ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E VN LVK
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRIQQAVNFPF--LVK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ K++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 98
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+P + L +R +F R I Y+H
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH--- 151
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 207
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 208 YNKAVDWWALGVLIYEMAAG 227
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y P + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+++DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N IG G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 85
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 86 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 140 LRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRW 192
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN L K
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LTK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+++DQ K++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN L K
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LTK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+++DQ K++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 87
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 88 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 142 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRW 194
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 50 IGEGGFGSVYK-GRLQDGTIVAVKVL--SVESKQGEKEFMS-EVASMANVNVCHENLVKL 105
+G+GGF Y+ + + A KV+ S+ K +KE MS E+A +++ H +V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH--VVGF 107
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
HG D +V + ++LL KRR R + +G+ Y+H
Sbjct: 108 HGFFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-- 161
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
V+HRD+K N+ L+ + + KI DFGL+ + T + GT Y+APE
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGH 219
Query: 226 TRKSDVYSFGVLLLEIVSGRTAVD 249
+ + D++S G +L ++ G+ +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 27/277 (9%)
Query: 41 TNGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMS-EVASMANVNVC 98
++ + ++G+G F V + G A K+++ + K ++F E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICRKLQ 63
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
H N+V+LH + LV+D + L + ++ R + I I +A
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIA 119
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFN---PKISDFGLSKLFPENTTHISTRVAGTLGYL 215
Y H +VHR++K N+LL K++DFGL+ N + AGT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 216 APEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV-DFD-------VQLGEYHLVDKAWGMY 267
+PE ++ D+++ GV+L ++ G D D ++ G Y W
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 234
Query: 268 NSKELMNLVDPMLYGNFPENE--AIRFLKVGLLCVQE 302
+ E +L+D ML N P+ A + LKV +C +E
Sbjct: 235 -TPEAKSLIDSMLTVN-PKKRITADQALKVPWICNRE 269
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 50 IGEGGFGSVYK-GRLQDGTIVAVKVL--SVESKQGEKEFMS-EVASMANVNVCHENLVKL 105
+G+GGF Y+ + + A KV+ S+ K +KE MS E+A +++ H +V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH--VVGF 91
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
HG D +V + SL L KRR R + +G+ Y+H
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-- 145
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
V+HRD+K N+ L+ + + KI DFGL+ E + GT Y+APE
Sbjct: 146 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 226 TRKSDVYSFGVLLLEIVSGRTAVD 249
+ + D++S G +L ++ G+ +
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 87
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 88 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 142 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRW 194
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 87
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 88 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 142 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRW 194
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 21/205 (10%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE----SKQGEKEFMSEVASMANVNVCHENLVK 104
+IG G F +VYKG L T V V ++ +K + F E + + H N+V+
Sbjct: 33 EIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ--HPNIVR 89
Query: 105 LHGG---CIDGP-CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
+ + G C +LV + + +L L KR K R I +GL ++
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLRSWCRQILKGLQFL 145
Query: 161 HEEIQPHVVHRDIKTSNILLD-QNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY 219
H P ++HRD+K NI + + KI D GL+ L + V GT + APE
Sbjct: 146 HTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPE- 200
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ DVY+FG LE +
Sbjct: 201 XYEEKYDESVDVYAFGXCXLEXATS 225
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 50 IGEGGFGSVYK-GRLQDGTIVAVKVL--SVESKQGEKEFMS-EVASMANVNVCHENLVKL 105
+G+GGF Y+ + + A KV+ S+ K +KE MS E+A +++ H +V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH--VVGF 107
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
HG D +V + ++LL KRR R + +G+ Y+H
Sbjct: 108 HGFFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-- 161
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
V+HRD+K N+ L+ + + KI DFGL+ E + GT Y+APE
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 226 TRKSDVYSFGVLLLEIVSGRTAVD 249
+ + D++S G +L ++ G+ +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 24/193 (12%)
Query: 66 GTIVAVKVLSVESKQGEKEFMSEV--ASMANVNVC-----HENLVKLHGGCIDGPCRILV 118
G AVK++ V +++ E + EV A+ ++ H +++ L LV
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 119 YDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNI 178
+D M L L + K R I+ + ++++H ++VHRD+K NI
Sbjct: 179 FDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENI 231
Query: 179 LLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGR------LTRKSDV 231
LLD N ++SDFG S L P + GT GYLAPE ++ D+
Sbjct: 232 LLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDL 288
Query: 232 YSFGVLLLEIVSG 244
++ GV+L +++G
Sbjct: 289 WACGVILFTLLAG 301
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 85
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 86 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 140 LRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRW 192
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 82
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 83 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 137 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 189
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 82
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 83 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 137 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 189
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 85
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 86 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 140 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 192
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 91
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 92 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 145
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 146 LRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRW 198
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN L K
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LTK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y P + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+++DQ K++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 82
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 83 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 137 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 189
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 50 IGEGGFGSVYK-GRLQDGTIVAVKVL--SVESKQGEKEFMS-EVASMANVNVCHENLVKL 105
+G+GGF Y+ + + A KV+ S+ K +KE MS E+A +++ H +V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH--VVGF 107
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
HG D +V + ++LL KRR R + +G+ Y+H
Sbjct: 108 HGFFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-- 161
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
V+HRD+K N+ L+ + + KI DFGL+ E + GT Y+APE
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 226 TRKSDVYSFGVLLLEIVSGRTAVD 249
+ + D++S G +L ++ G+ +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 85
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 86 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 140 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 192
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 79
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 80 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 133
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 134 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 186
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHI---STRVA 209
+ RG+ ++ +HRD+ NILL +N KI DFGL++ +N ++ TR+
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 210 GTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVS 243
L ++APE + KSDV+S+GVLL EI S
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMK--H 92
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 93 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 147 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 199
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 86
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 87 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 141 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 193
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 87
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 88 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 142 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 194
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 92
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 93 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 147 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 199
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 77
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 78 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 132 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 184
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 92
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 93 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 147 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 199
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 33/217 (15%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--- 210
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ H +AG
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVA 184
Query: 211 TLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 33/217 (15%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--- 210
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ H +AG
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVA 184
Query: 211 TLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 91
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 92 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 145
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 146 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 198
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 76
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 77 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 131 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 183
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 86
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 87 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 141 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 193
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 90
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 91 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 144
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 145 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 197
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 76
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 77 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 131 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 183
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 33/217 (15%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 76
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 77 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--- 210
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ H +AG
Sbjct: 131 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVA 180
Query: 211 TLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 103
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 104 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 158 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 210
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 100
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 101 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 155 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 207
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 78
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 79 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 132
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 133 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 185
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 99
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 100 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 153
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 154 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 206
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 86
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 87 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 141 LRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRW 193
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 86
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 87 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 141 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 193
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 77
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 78 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 132 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 184
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 100
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 101 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 155 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 207
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 26/236 (11%)
Query: 18 NTIGGEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTIV--AVKVLS 75
T+G I++ ++ N ++ T+G+ IG G + SV K + T + AVK++
Sbjct: 2 QTVGVHSIVQQLHR---NSIQF-TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIID 56
Query: 76 VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE 135
+SK+ E + + H N++ L DG +V + M L +L
Sbjct: 57 -KSKRDPTEEIEILLRYGQ----HPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL--- 108
Query: 136 KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL-LDQNFNP---KISDF 191
R+ F + ++ I + + Y+H + VVHRD+K SNIL +D++ NP +I DF
Sbjct: 109 -RQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 192 GLSK-LFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 246
G +K L EN ++ T ++APE D++S GVLL +++G T
Sbjct: 165 GFAKQLRAENGLLMTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT 218
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + QG+ E+ M ++ C N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHC--NIVRLRYF 81
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N ++I +R Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRA 190
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 251 NPNYTEFKFPQIKAHPWTKV 270
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVE---SKQGEKEFMSEVASMA 93
++ N F + +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNN-----SLSQTLLGEEKRRAKFGWKARRE 148
N +K D C ++ Y N LS+ + E R +G E
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEY---ANGGELFFHLSRERVFSEDRARFYG----AE 259
Query: 149 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 208
I+ L Y+H E +VV+RD+K N++LD++ + KI+DFGL K ++ + T
Sbjct: 260 IV----SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-F 312
Query: 209 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
GT YLAPE R D + GV++ E++ GR
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL + +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 82
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 83 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 137 LRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRW 189
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVE---SKQGEKEFMSEVASMA 93
++ N F + +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNN-----SLSQTLLGEEKRRAKFGWKARRE 148
N +K D C ++ Y N LS+ + E R +G E
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEY---ANGGELFFHLSRERVFSEDRARFYG----AE 256
Query: 149 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRV 208
I+ L Y+H E +VV+RD+K N++LD++ + KI+DFGL K ++ + T
Sbjct: 257 IV----SALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-F 309
Query: 209 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
GT YLAPE R D + GV++ E++ GR
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 99
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 100 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 153
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ +T T T
Sbjct: 154 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW 206
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 20/231 (8%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQDG-TIVAVKVLS---VESKQGEKEFMSEVAS 91
L++ + IG G FG V R + + A+K+LS + + F E
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
MA N +V+L D +V +YMP L L+ K+ E+++
Sbjct: 123 MAFANSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVL 179
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAG 210
L IH +HRD+K N+LLD++ + K++DFG K+ E T V G
Sbjct: 180 A----LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 231
Query: 211 TLGYLAPEYAIS----GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEY 257
T Y++PE S G R+ D +S GV L E++ G T D +G Y
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY 282
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + AGT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----AGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 20/231 (8%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQDG-TIVAVKVLS---VESKQGEKEFMSEVAS 91
L++ + IG G FG V R + + A+K+LS + + F E
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
MA N +V+L D +V +YMP L L+ K+ E+++
Sbjct: 128 MAFANSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVL 184
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAG 210
L IH +HRD+K N+LLD++ + K++DFG K+ E T V G
Sbjct: 185 A----LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 211 TLGYLAPEYAIS----GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEY 257
T Y++PE S G R+ D +S GV L E++ G T D +G Y
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY 287
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 20/231 (8%)
Query: 36 QLKIATNGFRWSNKIGEGGFGSVYKGRLQDG-TIVAVKVLS---VESKQGEKEFMSEVAS 91
L++ + IG G FG V R + + A+K+LS + + F E
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
MA N +V+L D +V +YMP L L+ K+ E+++
Sbjct: 128 MAFANSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVL 184
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAG 210
L IH +HRD+K N+LLD++ + K++DFG K+ E T V G
Sbjct: 185 A----LDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 211 TLGYLAPEYAIS----GRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEY 257
T Y++PE S G R+ D +S GV L E++ G T D +G Y
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY 287
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + QG+ E+ M ++ C N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHC--NIVRLRYF 81
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N ++I +R Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRA 190
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 251 NPNYTEFAFPQIKAHPWTKV 270
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 20/219 (9%)
Query: 34 YNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGTI-VAVKVLSVESKQGEKEFMSEVASM 92
Y Q + ++G+ IG G + + + + AVKV+ +SK+ E + +
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID-KSKRDPSEEIEILLRY 77
Query: 93 ANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
H N++ L DG LV + M L +L R+ F + ++
Sbjct: 78 GQ----HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHT 129
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNIL-LDQNFNP---KISDFGLSK-LFPENTTHISTR 207
IG+ + Y+H + VVHRD+K SNIL +D++ NP +I DFG +K L EN ++
Sbjct: 130 IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP- 185
Query: 208 VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 246
T ++APE D++S G+LL +++G T
Sbjct: 186 -CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+G G +GSV + G VA+K LS +S+ K E+ + ++ HEN++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ--HENVIGLL 89
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
YD+ QT L ++ KF + + ++ + +GL YIH
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDL-QKIMGLKFSEEKIQYLVYQMLKGLKYIHSA--- 145
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAISG-R 224
VVHRD+K N+ ++++ KI DFGL++ E T ++ TR Y APE +S
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMH 200
Query: 225 LTRKSDVYSFGVLLLEIVSGRT 246
+ D++S G ++ E+++G+T
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKT 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 34 YNQLKIATNGFRWSNKIGEGGFGSVY---KGRLQDGTIVAVKVLSVESKQGEKEFM-SEV 89
+ Q + + + + + +G G F V R Q +VA+K ++ ++ +G++ M +E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQ--KLVAIKCIAKKALEGKEGSMENEI 67
Query: 90 ASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI 149
A + + H N+V L G L+ + L ++ + + + +
Sbjct: 68 AVLHKIK--HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRL 121
Query: 150 IMGIGRGLAYIHEEIQPHVVHRDIKTSNIL---LDQNFNPKISDFGLSKLFPENTTHIST 206
I + + Y+H+ +VHRD+K N+L LD++ ISDFGLSK+ E+ + +
Sbjct: 122 IFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLS 176
Query: 207 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
GT GY+APE ++ D +S GV+ ++ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 118/268 (44%), Gaps = 47/268 (17%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVK-VLSVESKQGEKEFMS-EVASMANVNVCHENLVKLH 106
IG G FG VY+ +L D G +VA+K VL +K F + E+ M ++ C N+V+L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHC--NIVRLR 158
Query: 107 ------GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI--------IMG 152
G D LV DY+P R A+ +A++ + +
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVY---------RVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRV 208
+ R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 210 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 266
Query: 209 AGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMY 267
Y APE T DV+S G +L E++ G+ D + + + K G
Sbjct: 267 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 321
Query: 268 NSKELMNLVDPMLYGNFPENEAIRFLKV 295
+++ + FP+ +A + KV
Sbjct: 322 TREQIREMNPNYTEFKFPQIKAHPWTKV 349
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 31/297 (10%)
Query: 41 TNGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCH 99
T+ ++ IG+G F V + +L G A K+++ + E + + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
N+V+LH + LV+D + L + ++ R + I I + +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLH 118
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFN---PKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
H Q VVHRD+K N+LL K++DFGL+ + + AGT GYL+
Sbjct: 119 CH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV-DFD-------VQLGEYHLVDKAWGMYN 268
PE + D+++ GV+L ++ G D D ++ G Y W
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTV- 233
Query: 269 SKELMNLVDPMLYGNFPEN-EAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNGETNID 324
+ E NL++ ML N + A LK +C Q ST MM+ + ++
Sbjct: 234 TPEAKNLINQMLTINPAKRITAHEALKHPWVC---------QRSTVASMMHRQETVE 281
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 118/268 (44%), Gaps = 47/268 (17%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVK-VLSVESKQGEKEFMS-EVASMANVNVCHENLVKLH 106
IG G FG VY+ +L D G +VA+K VL +K F + E+ M ++ C N+V+L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHC--NIVRLR 107
Query: 107 ------GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI--------IMG 152
G D LV DY+P R A+ +A++ + +
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVY---------RVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRV 208
+ R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 159 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 215
Query: 209 AGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMY 267
Y APE T DV+S G +L E++ G+ D + + + K G
Sbjct: 216 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 270
Query: 268 NSKELMNLVDPMLYGNFPENEAIRFLKV 295
+++ + FP+ +A + KV
Sbjct: 271 TREQIREMNPNYTEFKFPQIKAHPWTKV 298
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 39/212 (18%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLH 106
K+ E G ++KGR Q IV VKVL V S + ++F E + + H N++ +
Sbjct: 17 KLNENHSGELWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFS--HPNVLPVL 73
Query: 107 GGCIDGPCR--ILVYDYMPNNSLSQTL------LGEEKRRAKFGWKARREIIMGIGRGLA 158
G C P L+ +MP SL L + ++ + KF + + RG+A
Sbjct: 74 GACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFA--------LDMARGMA 125
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTL---GYL 215
++H ++P + + + ++++D++ +IS + S + G + ++
Sbjct: 126 FLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVK---------FSFQSPGRMYAPAWV 175
Query: 216 APEYAISGRLT----RKSDVYSFGVLLLEIVS 243
APE A+ + R +D++SF VLL E+V+
Sbjct: 176 APE-ALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI D+GL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 118/268 (44%), Gaps = 47/268 (17%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVK-VLSVESKQGEKEFMS-EVASMANVNVCHENLVKLH 106
IG G FG VY+ +L D G +VA+K VL +K F + E+ M ++ C N+V+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHC--NIVRLR 113
Query: 107 ------GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI--------IMG 152
G D LV DY+P R A+ +A++ + +
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVY---------RVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRV 208
+ R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 165 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 221
Query: 209 AGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMY 267
Y APE T DV+S G +L E++ G+ D + + + K G
Sbjct: 222 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276
Query: 268 NSKELMNLVDPMLYGNFPENEAIRFLKV 295
+++ + FP+ +A + KV
Sbjct: 277 TREQIREMNPNYTEFKFPQIKAHPWTKV 304
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 118/268 (44%), Gaps = 47/268 (17%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVK-VLSVESKQGEKEFMS-EVASMANVNVCHENLVKLH 106
IG G FG VY+ +L D G +VA+K VL +K F + E+ M ++ C N+V+L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHC--NIVRLR 115
Query: 107 ------GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI--------IMG 152
G D LV DY+P R A+ +A++ + +
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVY---------RVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRV 208
+ R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 167 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 223
Query: 209 AGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMY 267
Y APE T DV+S G +L E++ G+ D + + + K G
Sbjct: 224 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 278
Query: 268 NSKELMNLVDPMLYGNFPENEAIRFLKV 295
+++ + FP+ +A + KV
Sbjct: 279 TREQIREMNPNYTEFKFPQIKAHPWTKV 306
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 40/215 (18%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVESK------QG---EKEFMSEVASMANVNVCH 99
+G GGFG V+ +++ G + A K L+ + QG EK+ +++V S V++ +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 100 ENLVK---------LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
K ++GG I R +Y+ +N G ++ RA F
Sbjct: 253 AFETKTDLCLVMTIMNGGDI----RYHIYNVDEDNP------GFQEPRAIF-------YT 295
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I GL ++H Q ++++RD+K N+LLD + N +ISD GL+ T + AG
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAG 351
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
T G++APE + D ++ GV L E+++ R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGR-LQDGTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 118/268 (44%), Gaps = 47/268 (17%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVK-VLSVESKQGEKEFMS-EVASMANVNVCHENLVKLH 106
IG G FG VY+ +L D G +VA+K VL +K F + E+ M ++ C N+V+L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHC--NIVRLR 117
Query: 107 ------GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI--------IMG 152
G D LV DY+P R A+ +A++ + +
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVY---------RVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRV 208
+ R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 169 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 225
Query: 209 AGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMY 267
Y APE T DV+S G +L E++ G+ D + + + K G
Sbjct: 226 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 280
Query: 268 NSKELMNLVDPMLYGNFPENEAIRFLKV 295
+++ + FP+ +A + KV
Sbjct: 281 TREQIREMNPNYTEFKFPQIKAHPWTKV 308
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQG-EKEFMSEVASMANVNVCHEN 101
F + +G G F V + G + AVK + ++ +G E +E+A + + HEN
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK--HEN 81
Query: 102 LVKLHGGCIDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
+V L + P + LV + L ++ + + K +I + + Y+
Sbjct: 82 IVALED-IYESPNHLYLVMQLVSGGELFDRIV----EKGFYTEKDASTLIRQVLDAVYYL 136
Query: 161 HEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
H + +VHRD+K N+L D+ ISDFGLSK+ E + + GT GY+AP
Sbjct: 137 H---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAP 191
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSG 244
E ++ D +S GV+ ++ G
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 40/215 (18%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVESK------QG---EKEFMSEVASMANVNVCH 99
+G GGFG V+ +++ G + A K L+ + QG EK+ +++V S V++ +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 100 ENLVK---------LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
K ++GG I R +Y+ +N G ++ RA F
Sbjct: 253 AFETKTDLCLVMTIMNGGDI----RYHIYNVDEDNP------GFQEPRAIF-------YT 295
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I GL ++H Q ++++RD+K N+LLD + N +ISD GL+ T + AG
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAG 351
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
T G++APE + D ++ GV L E+++ R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 43/266 (16%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + + + +E M ++ C N+V+L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHC--NIVRLRYF 86
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI--------IMGIG 154
G D LV DY+P R A+ +A++ + + +
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVY---------RVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 210
R LAYIH + HRDIK N+LLD + K+ DFG +K N ++I +R
Sbjct: 138 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 211 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNS 269
Y APE T DV+S G +L E++ G+ D + + + K G
Sbjct: 193 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 249
Query: 270 KELMNLVDPMLYGNFPENEAIRFLKV 295
+++ + FP+ +A + KV
Sbjct: 250 EQIREMNPNYTEFKFPQIKAHPWTKV 275
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 40/215 (18%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVESK------QG---EKEFMSEVASMANVNVCH 99
+G GGFG V+ +++ G + A K L+ + QG EK+ +++V S V++ +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 100 ENLVK---------LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
K ++GG I R +Y+ +N G ++ RA F
Sbjct: 253 AFETKTDLCLVMTIMNGGDI----RYHIYNVDEDNP------GFQEPRAIF-------YT 295
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I GL ++H Q ++++RD+K N+LLD + N +ISD GL+ T + AG
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAG 351
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
T G++APE + D ++ GV L E+++ R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 40/215 (18%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVESK------QG---EKEFMSEVASMANVNVCH 99
+G GGFG V+ +++ G + A K L+ + QG EK+ +++V S V++ +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 100 ENLVK---------LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII 150
K ++GG I R +Y+ +N G ++ RA F
Sbjct: 253 AFETKTDLCLVMTIMNGGDI----RYHIYNVDEDNP------GFQEPRAIF-------YT 295
Query: 151 MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG 210
I GL ++H Q ++++RD+K N+LLD + N +ISD GL+ T + AG
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAG 351
Query: 211 TLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
T G++APE + D ++ GV L E+++ R
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCHENLVKLH 106
+G G +GSV + G VA+K LS +S+ K E+ + ++ HEN++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ--HENVIGLL 107
Query: 107 GGCIDGPCRILVYDY---MPNNSLS-QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHE 162
YD+ MP Q ++G E K + ++ + +GL YIH
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHS 162
Query: 163 EIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF-PENTTHISTRVAGTLGYLAPEYAI 221
VVHRD+K N+ ++++ KI DFGL++ E T ++ TR Y APE +
Sbjct: 163 A---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVIL 214
Query: 222 SG-RLTRKSDVYSFGVLLLEIVSGRT 246
S + D++S G ++ E+++G+T
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + + + +E M ++ C N+V+L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHC--NIVRLRYF 94
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N ++I +R Y A
Sbjct: 152 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRA 203
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 204 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 263
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 264 NPNYTEFKFPQIKAHPWTKV 283
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + Q ++ E+ M ++ C N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHC--NIVRLRYF 81
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N ++I +R Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRA 190
Query: 217 PEYAI-SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE + T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 251 NPNYTEFKFPQIKAHPWTKV 270
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 33/217 (15%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 103
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 104 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--- 210
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ H + G
Sbjct: 158 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVA 207
Query: 211 TLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 117 LVYDYMPNNSL---SQTLLGEEKRRAKF-GWKARREIIMGIGRGLAYIHEEIQPHVVHRD 172
++Y+YM N+S+ + +K F + + II + +YIH E ++ HRD
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRD 177
Query: 173 IKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI--SGRLTRKSD 230
+K SNIL+D+N K+SDFG S+ + S GT ++ PE+ S K D
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVD 234
Query: 231 VYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPM-----LY---- 281
++S G+ L + + L E ++N+ N+ P+ LY
Sbjct: 235 IWSLGICLYVMFYNVVPFSLKISLVE---------LFNNIRTKNIEYPLDRNHFLYPLTN 285
Query: 282 ------GNFPENEAIRFLKVGL 297
NF NE I FLK+ L
Sbjct: 286 KKSTCSNNFLSNEDIDFLKLFL 307
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFAEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 125/307 (40%), Gaps = 51/307 (16%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGRLQDGT------IVAVKVLSVESKQG-EKEFMSEVASMA 93
T+ ++ ++G+G F V + + T I+ K LS Q E+E
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLERE--------- 80
Query: 94 NVNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI 149
+C H N+V+LH + LV+D + L + ++ R +
Sbjct: 81 -ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA----REYYSEADASHC 135
Query: 150 IMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN---PKISDFGLSKLFPENTTHIST 206
I I + +IH Q +VHRD+K N+LL K++DFGL+ + +
Sbjct: 136 IHQILESVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWF 191
Query: 207 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV-DFD-------VQLGEYH 258
AGT GYL+PE + D+++ GV+L ++ G D D ++ G Y
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 251
Query: 259 LVDKAWGMYNSKELMNLVDPMLYGNFPEN-EAIRFLKVGLLCVQEKSKLRPQMSTAIKMM 317
W + E NL++ ML N + A + LK +C Q ST MM
Sbjct: 252 FPSPEWDTV-TPEAKNLINQMLTINPAKRITADQALKHPWVC---------QRSTVASMM 301
Query: 318 NGETNID 324
+ + ++
Sbjct: 302 HRQETVE 308
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
H N++ L DG LV + M L +L R+ F + ++ IG+ +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVE 135
Query: 159 YIHEEIQPHVVHRDIKTSNIL-LDQNFNP---KISDFGLSK-LFPENTTHISTRVAGTLG 213
Y+H + VVHRD+K SNIL +D++ NP +I DFG +K L EN ++ T
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTAN 190
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 246
++APE D++S G+LL +++G T
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K EK+ +S+ + N V E L+K
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 125 HCHNX---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 178
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVE---SKQGEKEFMSEVASMA 93
++ N F + +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N +K D C ++ Y + L R F R I
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEY------ANGGELFFHLSRERVFSEDRARFYGAEI 118
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
L Y+H E +VV+RD+K N++LD++ + KI+DFGL K ++ + GT
Sbjct: 119 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPE 175
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
YLAPE R D + GV++ E++ GR
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVE---SKQGEKEFMSEVASMA 93
++ N F + +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N +K D C ++ Y + L R F R I
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEY------ANGGELFFHLSRERVFSEDRARFYGAEI 117
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
L Y+H E +VV+RD+K N++LD++ + KI+DFGL K ++ + GT
Sbjct: 118 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPE 174
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
YLAPE R D + GV++ E++ GR
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVE---SKQGEKEFMSEVASMA 93
++ N F + +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 94 NVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N +K D C ++ Y + L R F R I
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEY------ANGGELFFHLSRERVFSEDRARFYGAEI 119
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
L Y+H E +VV+RD+K N++LD++ + KI+DFGL K ++ + GT
Sbjct: 120 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPE 176
Query: 214 YLAPEYAISGRLTRKSDVYSFGVLLLEIVSGR 245
YLAPE R D + GV++ E++ GR
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 130 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 183
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 106
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 159
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 215
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 34/213 (15%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLV 103
KIG+G FG V+K R + G VA+K + +E+ EKE + ++ + + HEN+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFP-ITALREIKILQLLKHENVV 80
Query: 104 KLHGGCIDGP-----CR---ILVYDYMPNNS---LSQTLLGEEKRRAKFGWKARREIIMG 152
L C C+ LV+D+ ++ LS L+ KF + ++
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-------KFTLSEIKRVMQM 133
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-- 210
+ GL YIH ++HRD+K +N+L+ ++ K++DFGL++ F R
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 211 -TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEI 241
TL Y PE + R D++ G ++ E+
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 136/328 (41%), Gaps = 33/328 (10%)
Query: 41 TNGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCH 99
T+ ++ ++G+G F V + ++ G A K+++ + E + + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
N+V+LH + LV+D + L + ++ R + I I + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA----REYYSEADASHCIQQILESVNH 118
Query: 160 IHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
H +VHRD+K N+LL + K++DFGL+ + + AGT GYL+
Sbjct: 119 CHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV-DFD-------VQLGEYHLVDKAWGMYN 268
PE + D+++ GV+L ++ G D D ++ G Y W
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV- 233
Query: 269 SKELMNLVDPMLYGNFPEN-EAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNGETNIDGXD 327
+ E +L++ ML N + A LK +C Q ST MM+ + +D
Sbjct: 234 TPEAKDLINKMLTINPAKRITASEALKHPWIC---------QRSTVASMMHRQETVDCLK 284
Query: 328 VEISQPGLIGDIMDVKVGQR--SSSKSM 353
++ L G I+ + R S++KS+
Sbjct: 285 KFNARRKLKGAILTTMLATRNFSAAKSL 312
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+++DQ +++DFG +K T + GT YLAPE IS
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIIISKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 172 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 225
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 129 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 182
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 33/217 (15%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 100
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 101 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG--- 210
RGL YIH ++HRD+K SN+ ++++ KI DFGL++ H + G
Sbjct: 155 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVA 204
Query: 211 TLGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
T Y APE ++ + D++S G ++ E+++GRT
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX----GTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 128 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 181
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 219
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 145 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 198
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + QG+ E+ M ++ C N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHC--NIVRLRYF 81
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N + I +R Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 190
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 251 NPNYTEFAFPQIKAHPWTKV 270
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 117/268 (43%), Gaps = 47/268 (17%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVK-VLSVESKQGEKEFMS-EVASMANVNVCHENLVKLH 106
IG G FG VY+ +L D G +VA+K VL +K F + E+ M ++ C N+V+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQ------DKRFKNRELQIMRKLDHC--NIVRLR 113
Query: 107 ------GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI--------IMG 152
G D LV DY+P R A+ +A++ + +
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVY---------RVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRV 208
+ R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 165 LFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 221
Query: 209 AGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMY 267
Y APE T DV+S G +L E++ G+ D + + + K G
Sbjct: 222 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTP 276
Query: 268 NSKELMNLVDPMLYGNFPENEAIRFLKV 295
+++ + FP+ +A + KV
Sbjct: 277 TREQIREMNPNYTEFKFPQIKAHPWTKV 304
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 130 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 183
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 130 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 183
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 211
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 129 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 182
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 151
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 152 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 205
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 206 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 243
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 210
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 211
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 211
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 144 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 197
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K EK+ +S+ + N V E L+K
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 125 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 178
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 145 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 198
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 48 NKIGEGGFGSVYKGR-LQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCHENLVK 104
+ +G G +GSV ++ G +AVK LS +S K E+ + ++ HEN++
Sbjct: 57 SPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMK--HENVI- 113
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGIGRGLAYI 160
G +D + + L L+G + + K + +I I RGL YI
Sbjct: 114 ---GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 170
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYA 220
H ++HRD+K SN+ ++++ KI DFGL++ +T T T Y APE
Sbjct: 171 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRWYRAPEIM 223
Query: 221 ISG-RLTRKSDVYSFGVLLLEIVSGRT 246
++ D++S G ++ E+++GRT
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + + + +E M ++ C N+V+L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHC--NIVRLRYF 100
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N + I +R Y A
Sbjct: 158 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 209
Query: 217 PEYAI-SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE + T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 269
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 270 NPNYTEFKFPQIKAHPWTKV 289
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 34/213 (15%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLV 103
KIG+G FG V+K R + G VA+K + +E+ EKE + ++ + + HEN+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFP-ITALREIKILQLLKHENVV 80
Query: 104 KLHGGCIDGP-----CR---ILVYDYMPNNS---LSQTLLGEEKRRAKFGWKARREIIMG 152
L C C+ LV+D+ ++ LS L+ KF + ++
Sbjct: 81 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-------KFTLSEIKRVMQM 133
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-- 210
+ GL YIH ++HRD+K +N+L+ ++ K++DFGL++ F R
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 211 -TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEI 241
TL Y PE + R D++ G ++ E+
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 33/195 (16%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLV 103
KIG+G FG V+K R + G VA+K + +E+ EKE + ++ + + HEN+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFP-ITALREIKILQLLKHENVV 79
Query: 104 KLHGGCIDGP-----CR---ILVYDYMPNNS---LSQTLLGEEKRRAKFGWKARREIIMG 152
L C C+ LV+D+ ++ LS L+ KF + ++
Sbjct: 80 NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-------KFTLSEIKRVMQM 132
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-- 210
+ GL YIH ++HRD+K +N+L+ ++ K++DFGL++ F R
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 211 -TLGYLAPEYAISGR 224
TL Y PE + R
Sbjct: 190 VTLWYRPPELLLGER 204
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 124/292 (42%), Gaps = 78/292 (26%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVL--SVESKQGEKEFMSEVASMANVN--------- 96
++G G +G V K R + G I+AVK + +V S++ ++ M SM V+
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 97 ---------VCHE----NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGW 143
+C E +L K + ID ++ + +LG+
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDK-----------GQTIPEDILGK--------- 157
Query: 144 KARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH 203
I + I + L ++H ++ V+HRD+K SN+L++ K+ DFG+S ++
Sbjct: 158 -----IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA- 209
Query: 204 ISTRVAGTLGYLAPEYAISGRLTR-----KSDVYSFGVLLLEIVSGRTAVDFDVQLGEYH 258
T AG Y+APE I+ L + KSD++S G+ ++E+ R D
Sbjct: 210 -KTIDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD--------- 258
Query: 259 LVDKAWG--MYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+WG K+++ P L + E + F C+++ SK RP
Sbjct: 259 ----SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS---QCLKKNSKERP 303
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 164 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 217
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 255
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 210
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 210
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 125 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 178
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 158 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 211
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 157 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 210
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 34/213 (15%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC----HENLV 103
KIG+G FG V+K R + G VA+K + +E+ EKE + ++ + + HEN+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFP-ITALREIKILQLLKHENVV 80
Query: 104 KLHGGCIDGP-----CR---ILVYDYMPNNS---LSQTLLGEEKRRAKFGWKARREIIMG 152
L C C+ LV+D+ ++ LS L+ KF + ++
Sbjct: 81 NLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV-------KFTLSEIKRVMQM 133
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-- 210
+ GL YIH ++HRD+K +N+L+ ++ K++DFGL++ F R
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 211 -TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEI 241
TL Y PE + R D++ G ++ E+
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 177 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 230
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 268
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 145 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 198
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K + EK+ +S+ + N V E L+K
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 144 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 197
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 23 EQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQD-GTIVAVKVLS----VE 77
E LK S N ++ + F +G G FG V + ++ G A+K+L V+
Sbjct: 45 EDFLKKWETPSQNTAQL--DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 102
Query: 78 SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKR 137
KQ E ++E + VN LVKL D +V +Y+ + L +R
Sbjct: 103 LKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RR 155
Query: 138 RAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF 197
+F R I Y+H +++RD+K N+L+DQ +++DFG +K
Sbjct: 156 IGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 210
Query: 198 PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
+ + GT YLAPE +S + D ++ GVL+ E+ +G
Sbjct: 211 --RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 26/218 (11%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVCHEN-LVKLH 106
+G GGFGSVY G R+ D VA+K EK+ +S+ + N V E L+K
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIK-------HVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 107 GGCIDGPCRILVYDYMPNNSL--------SQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
G R+L + P++ + Q L R + R + +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ H V+HRDIK NIL+D N K+ DFG L + + T GT Y P
Sbjct: 172 HCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPP 225
Query: 218 EYAISGRLT-RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
E+ R R + V+S G+LL ++V G + D ++
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 100
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH--- 153
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 209
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 210 YNKAVDWWALGVLIYEMAAG 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 43/266 (16%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + + + +E M ++ C N+V+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHC--NIVRLRYF 93
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI--------IMGIG 154
G D LV DY+P R A+ +A++ + + +
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVY---------RVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 155 RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAG 210
R LAYIH + HRDIK N+LLD + K+ DFG +K N + I +R
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 211 TLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNS 269
Y APE T DV+S G +L E++ G+ D + + + K G
Sbjct: 200 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 256
Query: 270 KELMNLVDPMLYGNFPENEAIRFLKV 295
+++ + FP+ +A + KV
Sbjct: 257 EQIREMNPNYTEFKFPQIKAHPWTKV 282
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 23 EQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQD-GTIVAVKVLS----VE 77
E LK S N ++ + F +G G FG V + ++ G A+K+L V+
Sbjct: 45 EDFLKKWETPSQNTAQL--DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK 102
Query: 78 SKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKR 137
KQ E ++E + VN LVKL D +V +Y+ + L +R
Sbjct: 103 LKQIEHT-LNEKRILQAVNFPF--LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RR 155
Query: 138 RAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLF 197
+F R I Y+H +++RD+K N+L+DQ +++DFG +K
Sbjct: 156 IGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Query: 198 PENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
T + GT YLAPE +S + D ++ GVL+ E+ +G
Sbjct: 213 KGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 50 IGEGGFGSVYKGRLQDGT-IVAVKVLSVE---SKQGEKEFMSEVASMANVNVCHENLVKL 105
IG+G FG V + D + A+K ++ + + + E+ M + H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE--HPFLVNL 80
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
D +V D + L L ++ F + + I + L Y+ +
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICELVMALDYLQNQ-- 134
Query: 166 PHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR- 224
++HRD+K NILLD++ + I+DF ++ + P T T +AGT Y+APE S +
Sbjct: 135 -RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKG 191
Query: 225 --LTRKSDVYSFGVLLLEIVSGR 245
+ D +S GV E++ GR
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + Q ++ E+ M ++ C N+V+L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHC--NIVRLRYF 85
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N + I +R Y A
Sbjct: 143 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 194
Query: 217 PEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 254
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 255 NPNYTEFKFPQIKAHPWTKV 274
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK---LFPENTTH 203
R + + RGL Y+H V+HRD+K SN+L+++N KI DFG+++ P +
Sbjct: 162 RYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 204 ISTRVAGTLGYLAPEYAIS-GRLTRKSDVYSFGVLLLEIVSGR 245
T T Y APE +S T+ D++S G + E+++ R
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + + + +E M ++ C N+V+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHC--NIVRLRYF 93
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N + I +R Y A
Sbjct: 151 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 202
Query: 217 PEYAI-SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE + T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 262
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 263 NPNYTEFKFPQIKAHPWTKV 282
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + Q ++ E+ M ++ C N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHC--NIVRLRYF 81
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N + I +R Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 190
Query: 217 PEYAI-SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE + T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 251 NPNYTEFKFPQIKAHPWTKV 270
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + Q ++ E+ M ++ C N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHC--NIVRLRYF 81
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N + I +R Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 190
Query: 217 PEYAI-SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE + T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 251 NPNYTEFKFPQIKAHPWTKV 270
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 40/266 (15%)
Query: 69 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS- 126
VA+K +++E Q E + E+ +M+ + H N+V + + LV + S
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCH--HPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 127 ---LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 183
+ + E + I+ + GL Y+H+ Q +HRD+K NILL ++
Sbjct: 96 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 152
Query: 184 FNPKISDFGLSKLFPE----NTTHISTRVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLL 238
+ +I+DFG+S + GT ++APE R K+D++SFG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 212
Query: 239 LEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLV----DPMLYGNFPENEAIR--- 291
+E+ +G YH Y +++ L P L + E ++
Sbjct: 213 IELATGA---------APYH-------KYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYG 256
Query: 292 --FLKVGLLCVQEKSKLRPQMSTAIK 315
F K+ LC+Q+ + RP + ++
Sbjct: 257 KSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + + + +E M ++ C N+V+L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHC--NIVRLRYF 89
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N + I +R Y A
Sbjct: 147 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 198
Query: 217 PEYAI-SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE + T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 258
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 259 NPNYTEFKFPQIKAHPWTKV 278
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 40/266 (15%)
Query: 69 VAVKVLSVESKQGE-KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNS- 126
VA+K +++E Q E + E+ +M+ + H N+V + + LV + S
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCH--HPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 127 ---LSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQN 183
+ + E + I+ + GL Y+H+ Q +HRD+K NILL ++
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 157
Query: 184 FNPKISDFGLSKLFPE----NTTHISTRVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLL 238
+ +I+DFG+S + GT ++APE R K+D++SFG+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 239 LEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLV----DPMLYGNFPENEAIR--- 291
+E+ +G YH Y +++ L P L + E ++
Sbjct: 218 IELATGAAP---------YH-------KYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYG 261
Query: 292 --FLKVGLLCVQEKSKLRPQMSTAIK 315
F K+ LC+Q+ + RP + ++
Sbjct: 262 KSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + Q ++ E+ M ++ C N+V+L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHC--NIVRLRYF 82
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N + I +R Y A
Sbjct: 140 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 191
Query: 217 PEYAI-SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE + T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 251
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 252 NPNYTEFKFPQIKAHPWTKV 271
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 31/216 (14%)
Query: 44 FRWSNKIGEGGFGSV---YKGRLQDGTIVAVKVL--SVESKQGEKEFMSEVASMANVNVC 98
+R +G G +G+V GR G VA+K L +S+ K E+ + ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRT--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR-- 82
Query: 99 HENLVKLHGGCID--GPCRIL-----VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
HEN++ G +D P L Y MP T LG+ + K G + ++
Sbjct: 83 HENVI----GLLDVFTPDETLDDFTDFYLVMP---FMGTDLGKLMKHEKLGEDRIQFLVY 135
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGT 211
+ +GL YIH ++HRD+K N+ ++++ KI DFGL++ + + + V T
Sbjct: 136 QMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVV-T 188
Query: 212 LGYLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ R T+ D++S G ++ E+++G+T
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 147 REIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSK---LFPENTTH 203
R + + RGL Y+H V+HRD+K SN+L+++N KI DFG+++ P +
Sbjct: 161 RYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 204 ISTRVAGTLGYLAPEYAIS-GRLTRKSDVYSFGVLLLEIVSGR 245
T T Y APE +S T+ D++S G + E+++ R
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI DF L++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 31/260 (11%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
IG G FG VY+ +L D G +VA+K + Q ++ E+ M ++ C N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHC--NIVRLRYF 81
Query: 107 ----GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKA--RREIIMGIGRGLAYI 160
G D LV DY+P + RAK + + + R LAYI
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYR---VARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGYLA 216
H + HRDIK N+LLD + K+ DFG +K N + I +R Y A
Sbjct: 139 HSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRA 190
Query: 217 PEYAI-SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNL 275
PE + T DV+S G +L E++ G+ D + + + K G +++ +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 276 VDPMLYGNFPENEAIRFLKV 295
FP+ +A + KV
Sbjct: 251 NPNYTEFKFPQIKAHPWTKV 270
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
H N+++L LV+D M L L + K R+I+ + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 125
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAP 217
+H + ++VHRD+K NILLD + N K++DFG S +L P V GT YLAP
Sbjct: 126 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAP 179
Query: 218 EYAISGRLT-------RKSDVYSFGVLLLEIVSG 244
E I + ++ D++S GV++ +++G
Sbjct: 180 E-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 39 IATNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLS---------------------- 75
+ N + ++IG+G +G V + D T A+KVLS
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 76 ----VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTL 131
++ + ++ E+A + ++ H N+VKL +D P +Y M ++Q
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLD--HPNVVKL-VEVLDDPNEDHLY--MVFELVNQGP 124
Query: 132 LGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDF 191
+ E R + +G+ Y+H + ++HRDIK SN+L+ ++ + KI+DF
Sbjct: 125 VMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADF 181
Query: 192 GLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT---RKSDVYSFGVLLLEIVSGR 245
G+S F + +S V GT ++APE R + DV++ GV L V G+
Sbjct: 182 GVSNEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI FGL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 33 SYNQLKIATNGFRWSNKIGEGGFGSV-YKGRLQDGTIVAVKVL---------SVESKQGE 82
S N ++ F + +G+G FG V R + A+K+L VE E
Sbjct: 10 SNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVE 69
Query: 83 KE---FMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRA 139
K + + + ++ C + + +L+ V +Y+ L + ++
Sbjct: 70 KRVLALLDKPPFLTQLHSCFQTVDRLY----------FVMEYVNGGDLMYHI----QQVG 115
Query: 140 KFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPE 199
KF I GL ++H+ +++RD+K N++LD + KI+DFG+ K
Sbjct: 116 KFKEPQAVFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EH 170
Query: 200 NTTHISTR-VAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAVD 249
++TR GT Y+APE + D +++GVLL E+++G+ D
Sbjct: 171 MMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI D GL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ ++ +G
Sbjct: 215 YNKAVDWWALGVLIYQMAAG 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 16/222 (7%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKL 105
KIGEG +G V+K R +D G IVA+K S + +K + E+ + + H NLV L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK--HPNLVNL 67
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAK-FGWKARREIIMGIGRGLAYIHEEI 164
LV++Y T+L E R + + I + + + H+
Sbjct: 68 LEVFRRKRRLHLVFEYC-----DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH- 121
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI-SG 223
+ +HRD+K NIL+ ++ K+ DFG ++L + + VA T Y +PE +
Sbjct: 122 --NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPELLVGDT 178
Query: 224 RLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG 265
+ DV++ G + E++SG + + +L+ K G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 220
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 92
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 145
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+D+ +++DFG +K T + GT YLAPE +S
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPEIILSKG 201
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 202 YNKAVDWWALGVLIYEMAAG 221
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
H N+++L LV+D M L L + K R+I+ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAP 217
+H + ++VHRD+K NILLD + N K++DFG S +L P V GT YLAP
Sbjct: 139 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAP 192
Query: 218 EYAISGRLT-------RKSDVYSFGVLLLEIVSG 244
E I + ++ D++S GV++ +++G
Sbjct: 193 E-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI D GL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
H N+++L LV+D M L L + K R+I+ + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVIC 138
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAP 217
+H + ++VHRD+K NILLD + N K++DFG S +L P V GT YLAP
Sbjct: 139 ALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGTPSYLAP 192
Query: 218 EYAISGRLT-------RKSDVYSFGVLLLEIVSG 244
E I + ++ D++S GV++ +++G
Sbjct: 193 E-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 45 RWSN--KIGEGGFGSVYKG-RLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCH 99
R+ N +G G +GSV + G VAVK LS +S K E+ + ++ H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--H 80
Query: 100 ENLVKLHGGCID--GPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGI 153
EN++ G +D P R L + + L L+G + + K + +I I
Sbjct: 81 ENVI----GLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLG 213
RGL YIH ++HRD+K SN+ ++++ KI D GL++ +T T T
Sbjct: 135 LRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLAR----HTDDEMTGYVATRW 187
Query: 214 YLAPEYAISG-RLTRKSDVYSFGVLLLEIVSGRT 246
Y APE ++ + D++S G ++ E+++GRT
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 46/276 (16%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVL--SVESKQGEKEFMSEVASMANVNVCHENLVKL 105
++G G +G V K R + G I+AVK + +V S++ ++ M SM V+ V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT--VTF 71
Query: 106 HGGCI-DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG-----IGRGLAY 159
+G +G I + L T L + ++ + E I+G I + L +
Sbjct: 72 YGALFREGDVWICM-------ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY 219
+H ++ V+HRD+K SN+L++ K+ DFG+S ++ AG Y+APE
Sbjct: 125 LHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--AGCKPYMAPE- 179
Query: 220 AISGRLTR-----KSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWG--MYNSKEL 272
I+ L + KSD++S G+ ++E+ R D +WG K++
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-------------SWGTPFQQLKQV 226
Query: 273 MNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+ P L + E + F C+++ SK RP
Sbjct: 227 VEEPSPQLPADKFSAEFVDFTS---QCLKKNSKERP 259
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 24/235 (10%)
Query: 18 NTIGGEQILKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQDGT--IVAVKVLS 75
T+G I++ ++ N ++ T+G+ IG G + SV K + T AVK++
Sbjct: 2 QTVGVHSIVQQLHR---NSIQF-TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIID 56
Query: 76 VESKQGEKEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEE 135
+SK+ E + + H N++ L DG +V + L +L
Sbjct: 57 -KSKRDPTEEIEILLRYGQ----HPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL--- 108
Query: 136 KRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNIL-LDQNFNP---KISDF 191
R+ F + ++ I + + Y+H + VVHRD+K SNIL +D++ NP +I DF
Sbjct: 109 -RQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDF 164
Query: 192 GLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRT 246
G +K + T T ++APE D++S GVLL ++G T
Sbjct: 165 GFAKQLRAENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYT 218
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT YLAP +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEYLAPAIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 40 ATNGFRWSNK---IGEGGFGSVYK-GRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANV 95
A N F +K +G G FG V+K G +A K++ + ++E +E++ M +
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 96 NVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
+ H NL++L+ +LV +Y+ L ++ E + + I
Sbjct: 144 D--HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL---FMKQICE 198
Query: 156 GLAYIHEEIQPHVVHRDIKTSNIL-LDQNFNP-KISDFGLSKLF-PENTTHISTRVAGTL 212
G+ ++H Q +++H D+K NIL ++++ KI DFGL++ + P ++ GT
Sbjct: 199 GIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTP 252
Query: 213 GYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
+LAPE ++ +D++S GV+ ++SG
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 31/297 (10%)
Query: 41 TNGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCH 99
T+ ++ ++G+G F V + ++ G A K+++ + E + + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
N+V+LH + LV+D + L + ++ R + I I + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA----REYYSEADASHCIQQILESVNH 118
Query: 160 IHEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
H +VHRD+K N+LL + K++DFGL+ + + AGT GYL+
Sbjct: 119 CHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV-DFD-------VQLGEYHLVDKAWGMYN 268
PE + D+++ GV+L ++ G D D ++ G Y W
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV- 233
Query: 269 SKELMNLVDPMLYGNFPEN-EAIRFLKVGLLCVQEKSKLRPQMSTAIKMMNGETNID 324
+ E +L++ ML N + A LK +C Q ST MM+ + +D
Sbjct: 234 TPEAKDLINKMLTINPAKRITASEALKHPWIC---------QRSTVASMMHRQETVD 281
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 27/208 (12%)
Query: 50 IGEGGFGSV---YKGRLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G +GSV Y RL+ VAVK LS +S + E+ + ++ HEN++
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLK--HENVI- 90
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGIGRGLAYI 160
G +D + L TL+G + + + + ++ + RGL YI
Sbjct: 91 ---GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTT-HISTRVAGTLGYLAPEY 219
H ++HRD+K SN+ ++++ +I DFGL++ E T +++TR Y APE
Sbjct: 148 H---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEI 199
Query: 220 AISG-RLTRKSDVYSFGVLLLEIVSGRT 246
++ + D++S G ++ E++ G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 36/219 (16%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH-- 106
+G GG G V+ D VA+K + + Q K + E+ + ++ H+N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLD--HDNIVKVFEI 76
Query: 107 ------------GGCIDGPCRILVYDYMPN---NSLSQTLLGEEKRRAKFGWKARREIIM 151
G + +V +YM N L Q L EE R F ++
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQ------- 128
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLD-QNFNPKISDFGLSKLFPENTTHISTRVAG 210
+ RGL YIH +V+HRD+K +N+ ++ ++ KI DFGL+++ + +H G
Sbjct: 129 -LLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 211 --TLGYLAPEYAIS-GRLTRKSDVYSFGVLLLEIVSGRT 246
T Y +P +S T+ D+++ G + E+++G+T
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 27/208 (12%)
Query: 50 IGEGGFGSV---YKGRLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G +GSV Y RL+ VAVK LS +S + E+ + ++ HEN++
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLK--HENVI- 82
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGIGRGLAYI 160
G +D + L TL+G + + + + ++ + RGL YI
Sbjct: 83 ---GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 139
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTT-HISTRVAGTLGYLAPEY 219
H ++HRD+K SN+ ++++ +I DFGL++ E T +++TR Y APE
Sbjct: 140 HSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEI 191
Query: 220 AISG-RLTRKSDVYSFGVLLLEIVSGRT 246
++ + D++S G ++ E++ G+
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 50 IGEGGFGSVYKGRLQD-GTIVAVKVLS----VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G FG V + ++ G A+K+L V+ KQ E ++E + VN LVK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPF--LVK 105
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L D +V +Y+ + L +R +F R I Y+H
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLH--- 158
Query: 165 QPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGR 224
+++RD+K N+L+DQ +++DFG +K T + GT LAPE +S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL----CGTPEALAPEIILSKG 214
Query: 225 LTRKSDVYSFGVLLLEIVSG 244
+ D ++ GVL+ E+ +G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 108/246 (43%), Gaps = 31/246 (12%)
Query: 32 FSYNQLKIATNGFRWSNKIGEGGFGSV--YKGRLQDGTIVAVKVLSVESKQGEKEFMSEV 89
F + + I + + K+GEGGF V +G L DG A+K + +Q +E E
Sbjct: 19 FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREA 77
Query: 90 ASMANVNVCHENLVKLHGGCI-DGPCRILVYDYMPNNSLSQTLLGE-EKRRAKFGWKARR 147
N H N+++L C+ + + + +P TL E E+ + K +
Sbjct: 78 DMHRLFN--HPNILRLVAYCLRERGAKHEAWLLLPFFKRG-TLWNEIERLKDKGNFLTED 134
Query: 148 EII---MGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHI 204
+I+ +GI RGL IH + HRD+K +NILL P + D G + H+
Sbjct: 135 QILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN---QACIHV 188
Query: 205 S-TRVAGTL----------GYLAPE-YAISGR--LTRKSDVYSFGVLLLEIVSGRTAVDF 250
+R A TL Y APE +++ + ++DV+S G +L ++ G D
Sbjct: 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
Query: 251 DVQLGE 256
Q G+
Sbjct: 249 VFQKGD 254
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 27/208 (12%)
Query: 50 IGEGGFGSV---YKGRLQDGTIVAVKVLS--VESKQGEKEFMSEVASMANVNVCHENLVK 104
+G G +GSV Y RL+ VAVK LS +S + E+ + ++ HEN++
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLK--HENVI- 90
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEE----KRRAKFGWKARREIIMGIGRGLAYI 160
G +D + L TL+G + + + + ++ + RGL YI
Sbjct: 91 ---GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 147
Query: 161 HEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTT-HISTRVAGTLGYLAPEY 219
H ++HRD+K SN+ ++++ +I DFGL++ E T +++TR Y APE
Sbjct: 148 H---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEI 199
Query: 220 AISG-RLTRKSDVYSFGVLLLEIVSGRT 246
++ + D++S G ++ E++ G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLT 226
+HRD+ NILL + KI DFGL++ ++ ++ A L ++APE T
Sbjct: 219 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 278
Query: 227 RKSDVYSFGVLLLEIVS 243
+SDV+SFGVLL EI S
Sbjct: 279 IQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLT 226
+HRD+ NILL + KI DFGL++ ++ ++ A L ++APE T
Sbjct: 221 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 280
Query: 227 RKSDVYSFGVLLLEIVS 243
+SDV+SFGVLL EI S
Sbjct: 281 IQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLT 226
+HRD+ NILL + KI DFGL++ ++ ++ A L ++APE T
Sbjct: 212 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 271
Query: 227 RKSDVYSFGVLLLEIVS 243
+SDV+SFGVLL EI S
Sbjct: 272 IQSDVWSFGVLLWEIFS 288
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---------TRVAGTLGYLAPE 218
V+HRD+K SN+L++ N + K+ DFGL+++ E+ S T T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 219 YAI-SGRLTRKSDVYSFGVLLLEIVSGR 245
+ S + +R DV+S G +L E+ R
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAG-TLGYLAPEYAISGRLT 226
+HRD+ NILL + KI DFGL++ ++ ++ A L ++APE T
Sbjct: 214 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 273
Query: 227 RKSDVYSFGVLLLEIVS 243
+SDV+SFGVLL EI S
Sbjct: 274 IQSDVWSFGVLLWEIFS 290
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH-ISTR-VAGTLGYLAPEYAISGRL 225
+++RD+K N++LD + KI+DFG+ K EN ++T+ GT Y+APE
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 226 TRKSDVYSFGVLLLEIVSGRTAVD 249
+ D ++FGVLL E+++G+ +
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---------TRVAGTLGYLAPE 218
V+HRD+K SN+L++ N + K+ DFGL+++ E+ S T T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 219 YAI-SGRLTRKSDVYSFGVLLLEIVSGR 245
+ S + +R DV+S G +L E+ R
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTH-ISTR-VAGTLGYLAPEYAISGRL 225
+++RD+K N++LD + KI+DFG+ K EN ++T+ GT Y+APE
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 226 TRKSDVYSFGVLLLEIVSGRTAVD 249
+ D ++FGVLL E+++G+ +
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 47/272 (17%)
Query: 47 SNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKL 105
S +GEG + V LQ+G AVK++ ++ EV ++ ++N+++L
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG-NKNILEL 76
Query: 106 HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQ 165
D LV++ + S+ L +++ F + ++ + L ++H +
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSI----LAHIQKQKHFNEREASRVVRDVAAALDFLHTK-- 130
Query: 166 PHVVHRDIKTSNILLD--QNFNP-KISDFGLSKLFPEN------TTHISTRVAGTLGYLA 216
+ HRD+K NIL + + +P KI DF L N TT T G+ Y+A
Sbjct: 131 -GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 217 PEY--AISGRLT---RKSDVYSFGVLLLEIVSG-----------------------RTAV 248
PE + + T ++ D++S GV+L ++SG + +
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL 249
Query: 249 DFDVQLGEYHLVDKAWGMYNSKELMNLVDPML 280
+Q G+Y DK W + S E +L+ +L
Sbjct: 250 FESIQEGKYEFPDKDWA-HISSEAKDLISKLL 280
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 50 IGEGGFGSVYKGRLQDGTIVAV-KVLSVESKQGEKEFMSEVASMANVNVCHENLVKL--- 105
IG G FG V++ +L + VA+ KVL +K F + + + V H N+V L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQ------DKRFKNRELQIMRI-VKHPNVVDLKAF 100
Query: 106 ---HGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREII----MGIGRGLA 158
+G D LV +Y+P +T+ + AK +I + R LA
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVP-----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSKLF---PENTTHISTRVAGTLGY 214
YIH + HRDIK N+LLD K+ DFG +K+ N + I +R Y
Sbjct: 156 YIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-----Y 207
Query: 215 LAPEYAI-SGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELM 273
APE + T D++S G ++ E++ G+ + + + + K G + +++
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267
Query: 274 NLVDPMLYGNFPENEAIRFLKV 295
+ + FP+ F KV
Sbjct: 268 TMNPNYMEHKFPQIRPHPFSKV 289
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 39/222 (17%)
Query: 50 IGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKE-FMSEVASMANVNVCHENLVKLHG 107
+G GGFG V++ + + D A+K + + +++ +E M EV ++A + H +V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE--HPGIVRYFN 70
Query: 108 GCIDG-------PCRILVYDYMP-----NNSLSQTLLG----EEKRRAKFGWKARREIIM 151
++ P VY Y+ +L + G EE+ R+ I +
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS-----VCLHIFL 125
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGL-----------SKLFPEN 200
I + ++H + ++HRD+K SNI + K+ DFGL + L P
Sbjct: 126 QIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 201 TTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 242
T GT Y++PE + K D++S G++L E++
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEF---MSEVASMANVNVCH 99
F+ +++G G +G V+K R +DG + AVK S+ +G K+ ++EV S V H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQ-H 116
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTL--LGEEKRRAKFGWKARREIIMGIGRGL 157
V+L +G L + + SL Q G A+ W R+ ++ L
Sbjct: 117 PCCVRLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQV-WGYLRDTLLA----L 170
Query: 158 AYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
A++H + +VH D+K +NI L K+ DFGL L T G Y+AP
Sbjct: 171 AHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAP 225
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIV 242
E + G +DV+S G+ +LE+
Sbjct: 226 EL-LQGSYGTAADVFSLGLTILEVA 249
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKG-RLQDG-------TIVAVKVLSVESKQGEKEFMSEV 89
KI ++ +G+G F ++KG R + G T V +KVL + + F E
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFF-EA 62
Query: 90 ASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI 149
ASM + + H++LV +G C+ G ILV +++ SL T L + K WK E+
Sbjct: 63 ASMMS-KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLD-TYLKKNKNCINILWKL--EV 118
Query: 150 IMGIGRGLAYIHEEIQPHVVHRDIKTSNILL-----DQNFNP---KISDFGLS-KLFPEN 200
+ + ++ E ++H ++ NILL + NP K+SD G+S + P++
Sbjct: 119 AKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 201 TTHISTRVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSG 244
+ R+ ++ PE + + L +D +SFG L EI SG
Sbjct: 176 I--LQERIP----WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVN--- 96
++ + IG G FG R Q +VAVK + ++GEK + E +N
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYI----ERGEK--IDENVKREIINHRS 71
Query: 97 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
+ H N+V+ + +V +Y L + + +F R + G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA----GRFSEDEARFFFQQLISG 127
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNP--KISDFGLSKLFPENTTHISTRVA-GTLG 213
++Y H V HRD+K N LLD + P KI+DFG SK + H + A GT
Sbjct: 128 VSYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPA 181
Query: 214 YLAPEYAISGRLTRK-SDVYSFGVLLLEIVSG 244
Y+APE + K +DV+S GV L ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHE 100
++ F +++G G VY+ + Q GT + ++ +K +E+ + + + H
Sbjct: 52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKIVRTEIGVL--LRLSHP 108
Query: 101 NLVKLHGGCIDGPCRI-LVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
N++KL + P I LV + + L ++ + + + + + I +AY
Sbjct: 109 NIIKLKE-IFETPTEISLVLELVTGGELFDRIV----EKGYYSERDAADAVKQILEAVAY 163
Query: 160 IHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
+HE +VHRD+K N+L + KI+DFGLSK+ E+ + T V GT GY A
Sbjct: 164 LHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-EHQVLMKT-VCGTPGYCA 218
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSG 244
PE + D++S G++ ++ G
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 97/233 (41%), Gaps = 32/233 (13%)
Query: 44 FRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVC---- 98
+R +G+GGFG+V+ G RL D VA+KV+ G V V +
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 99 ----HENLVKLHGGCIDGPCRILVYDY-MPNNSLSQTL-----LGEEKRRAKFGWKARRE 148
H +++L +LV + +P L + LGE R FG +
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFG-----Q 147
Query: 149 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLD-QNFNPKISDFGLSKLFPENTTHISTR 207
++ I + H VVHRDIK NIL+D + K+ DFG L + T
Sbjct: 148 VVAAI----QHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY---TD 197
Query: 208 VAGTLGYLAPEYAISGRL-TRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHL 259
GT Y PE+ + + V+S G+LL ++V G + D ++ E L
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 21/248 (8%)
Query: 48 NKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLH 106
++G+G F V + ++ G A K+++ + E + + H N+V+LH
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
+ L++D + L + ++ R + I I + + H Q
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCH---QM 140
Query: 167 HVVHRDIKTSNILLDQNFN---PKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISG 223
VVHRD+K N+LL K++DFGL+ + E AGT GYL+PE
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 224 RLTRKSDVYSFGVLLLEIVSGRTAV-DFD-------VQLGEYHLVDKAWGMYNSKELMNL 275
+ D+++ GV+L ++ G D D ++ G Y W + E +L
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV-TPEAKDL 258
Query: 276 VDPMLYGN 283
++ ML N
Sbjct: 259 INKMLTIN 266
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMAN-VNVC 98
++ + IG G FG R Q +VAVK + ++GEK + + N ++
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI----ERGEKIAANVKREIINHRSLR 73
Query: 99 HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLA 158
H N+V+ + +V +Y L + + +F R + G++
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA----GRFSEDEARFFFQQLISGVS 129
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNP--KISDFGLSKLFPENTTHISTRVAGTLGYLA 216
Y H V HRD+K N LLD + P KI DFG SK ++ ST GT Y+A
Sbjct: 130 YCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIA 184
Query: 217 PEYAISGRLTRK-SDVYSFGVLLLEIVSG 244
PE + K +DV+S GV L ++ G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVN--- 96
++ + IG G FG R Q +VAVK + ++GEK + E +N
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI----ERGEK--IDENVKREIINHRS 70
Query: 97 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
+ H N+V+ + +V +Y L + + +F R + G
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA----GRFSEDEARFFFQQLISG 126
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNP--KISDFGLSKLFPENTTHISTRVAGTLGY 214
++Y H V HRD+K N LLD + P KI DFG SK ++ ST GT Y
Sbjct: 127 VSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAY 181
Query: 215 LAPEYAISGRLTRK-SDVYSFGVLLLEIVSG 244
+APE + K +DV+S GV L ++ G
Sbjct: 182 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHIS---------TRVAGTLGYLAPE 218
V+HRD+K SN+L++ N + K+ DFGL+++ E+ S T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 219 YAI-SGRLTRKSDVYSFGVLLLEIVSGR 245
+ S + +R DV+S G +L E+ R
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 32/225 (14%)
Query: 38 KIATNGFRWSNKIGEGGFGSVYKG-RLQDG-------TIVAVKVLSVESKQGEKEFMSEV 89
KI ++ +G+G F ++KG R + G T V +KVL + + F E
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFF-EA 62
Query: 90 ASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI 149
ASM + + H++LV +G C G ILV +++ SL T L + K WK E+
Sbjct: 63 ASMMS-KLSHKHLVLNYGVCFCGDENILVQEFVKFGSLD-TYLKKNKNCINILWKL--EV 118
Query: 150 IMGIGRGLAYIHEEIQPHVVHRDIKTSNILL-----DQNFNP---KISDFGLS-KLFPEN 200
+ + ++ E ++H ++ NILL + NP K+SD G+S + P++
Sbjct: 119 AKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 201 TTHISTRVAGTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSG 244
+ R+ ++ PE + + L +D +SFG L EI SG
Sbjct: 176 I--LQERIP----WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 120/282 (42%), Gaps = 35/282 (12%)
Query: 35 NQLKIATNGFRWSNKIGEGGFGSVYKGRL-QDGTIVAVKVLSVES--KQGEKEFMSEVAS 91
++++ + F IG G F V ++ Q G + A+K+++ K+GE E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGE--EKRRAKFGWKARREI 149
+ VN + +LH D LV +Y L TLL + E+ A+ EI
Sbjct: 114 VL-VNGDRRWITQLHFAFQDENYLYLVMEYYVGGDL-LTLLSKFGERIPAEMARFYLAEI 171
Query: 150 IMGIG--RGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+M I L Y VHRDIK NILLD+ + +++DFG + T S
Sbjct: 172 VMAIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLV 222
Query: 208 VAGTLGYLAPE-------YAISGRLTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLV 260
GT YL+PE +G + D ++ GV E+ G+T D Y +
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
Query: 261 DKAWGMYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQE 302
+ KE ++L P++ PE EA F++ LLC E
Sbjct: 283 ------VHYKEHLSL--PLVDEGVPE-EARDFIQ-RLLCPPE 314
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 41/265 (15%)
Query: 41 TNGFRWSNKIGEGGFGSVYK------GRLQDGTIVAVKVLSVESKQG-EKEFMSEVASMA 93
T ++ ++G+G F V + G+ I+ K LS Q E+E
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLERE--------- 60
Query: 94 NVNVC----HENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREI 149
+C H N+V+LH + L++D + L + ++ R +
Sbjct: 61 -ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA----REYYSEADASHC 115
Query: 150 IMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFN---PKISDFGLSKLFPENTTHIST 206
I I + + H Q VVHR++K N+LL K++DFGL+ + E
Sbjct: 116 IQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWF 171
Query: 207 RVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSGRTAV-DFD-------VQLGEYH 258
AGT GYL+PE + D+++ GV+L ++ G D D ++ G Y
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
Query: 259 LVDKAWGMYNSKELMNLVDPMLYGN 283
W + E +L++ ML N
Sbjct: 232 FPSPEWDTV-TPEAKDLINKMLTIN 255
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 112 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 166
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 167 -ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 225
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 226 SPGMKTRIRMGQYEFPNPEWS 246
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 33/209 (15%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLH 106
K+ E G ++KGR Q G + VKVL V S + ++F E + + H N++ +
Sbjct: 17 KLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS--HPNVLPVL 73
Query: 107 GGCIDGPCR--ILVYDYMPNNSLSQTL------LGEEKRRAKFGWKARREIIMGIGRGLA 158
G C P L+ + P SL L + ++ + KF + RG A
Sbjct: 74 GACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFA--------LDXARGXA 125
Query: 159 YIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPE 218
++H ++P + + + ++ +D++ +IS + F S ++APE
Sbjct: 126 FLHT-LEPLIPRHALNSRSVXIDEDXTARISXADVKFSF------QSPGRXYAPAWVAPE 178
Query: 219 YAISGRLT----RKSDVYSFGVLLLEIVS 243
A+ + R +D +SF VLL E+V+
Sbjct: 179 -ALQKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 158 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 212
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 213 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 271
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 272 SPGMKTRIRMGQYEFPNPEWS 292
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 182
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 183 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 241
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 242 SPGMKTRIRMGQYEFPNPEWS 262
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 174
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 175 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 233
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 234 SPGMKTRIRMGQYEFPNPEWS 254
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 164 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 218
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 219 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 277
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 278 SPGMKTRIRMGQYEFPNPEWS 298
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 119 FTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 173
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 174 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 232
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 233 SPGMKTRIRMGQYEFPNPEWS 253
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 112 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 166
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 167 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 225
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 226 SPGMKTRIRMGQYEFPNPEWS 246
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 113 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 167
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 168 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 226
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 227 SPGMKTRIRMGQYEFPNPEWS 247
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 118 FTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 172
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 173 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 231
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 232 SPGMKTRIRMGQYEFPNPEWS 252
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 114 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 168
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 169 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 227
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 228 SPGMKTRIRMGQYEFPNPEWS 248
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI+ IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 114 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 168
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG------------ 244
E T+H S T T Y+APE + + D++S GV++ ++ G
Sbjct: 169 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 227
Query: 245 RTAVDFDVQLGEYHLVDKAWG 265
+ +++G+Y + W
Sbjct: 228 SPGMKTRIRMGQYEFPNPEWS 248
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 34/230 (14%)
Query: 26 LKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQD---GTIVAVKVLSVESKQGE 82
LK ++ ++ AT+ R +G G FG V+ R++D G AVK + +E + E
Sbjct: 81 LKPVDYEYREEVHWATHQLR----LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAE 134
Query: 83 KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
+ MA + +V L+G +GP + + + SL Q L+ E+ G
Sbjct: 135 E-------LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQ------G 180
Query: 143 WKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQN-FNPKISDFGLS-KLF 197
+ +G+ GL Y+H ++H D+K N+LL + + + DFG + L
Sbjct: 181 CLPEDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ 237
Query: 198 PE---NTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
P+ + + GT ++APE + K DV+S ++L +++G
Sbjct: 238 PDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 41 TNGFRWSNKIGEGGFGSVYK--GRLQDGTIVAVKVLSVESKQ------GEKEFMSEVASM 92
T F KIG G FGSV+K RL DG I A+K SK+ E+ + EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 62
Query: 93 ANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
A + H ++V+ + ++ +Y SL+ + + + F +++++
Sbjct: 63 AVLGQ-HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 186
+GRGL YIH +VH DIK SNI + + P
Sbjct: 122 VGRGLRYIHSM---SLVHMDIKPSNIFISRTSIP 152
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 41 TNGFRWSNKIGEGGFGSVYK--GRLQDGTIVAVK--VLSVESKQGEKEFMSEVASMANVN 96
T F KIG G FGSV+K RL DG I A+K + E+ + EV + A +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 68
Query: 97 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H ++V+ + ++ +Y SL+ + + + F +++++ +GRG
Sbjct: 69 Q-HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNP 186
L YIH +VH DIK SNI + + P
Sbjct: 128 LRYIHSM---SLVHMDIKPSNIFISRTSIP 154
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 41 TNGFRWSNKIGEGGFGSVYK--GRLQDGTIVAVKVLSVESKQ------GEKEFMSEVASM 92
T F KIG G FGSV+K RL DG I A+K SK+ E+ + EV +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 60
Query: 93 ANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
A + H ++V+ + ++ +Y SL+ + + + F +++++
Sbjct: 61 AVLGQ-HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 119
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 186
+GRGL YIH +VH DIK SNI + + P
Sbjct: 120 VGRGLRYIHSM---SLVHMDIKPSNIFISRTSIP 150
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 41 TNGFRWSNKIGEGGFGSVYK--GRLQDGTIVAVKVLSVESKQ------GEKEFMSEVASM 92
T F KIG G FGSV+K RL DG I A+K SK+ E+ + EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 62
Query: 93 ANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMG 152
A + H ++V+ + ++ +Y SL+ + + + F +++++
Sbjct: 63 AVLGQ-HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 153 IGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP 186
+GRGL YIH +VH DIK SNI + + P
Sbjct: 122 VGRGLRYIHSM---SLVHMDIKPSNIFISRTSIP 152
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 34/230 (14%)
Query: 26 LKNINAFSYNQLKIATNGFRWSNKIGEGGFGSVYKGRLQD---GTIVAVKVLSVESKQGE 82
LK ++ ++ AT+ R +G G FG V+ R++D G AVK + +E + E
Sbjct: 62 LKPVDYEYREEVHWATHQLR----LGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAE 115
Query: 83 KEFMSEVASMANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFG 142
+ MA + +V L+G +GP + + + SL Q L+ E+ G
Sbjct: 116 E-------LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQ------G 161
Query: 143 WKARREIIMGIGR---GLAYIHEEIQPHVVHRDIKTSNILLDQN-FNPKISDFGLS-KLF 197
+ +G+ GL Y+H ++H D+K N+LL + + + DFG + L
Sbjct: 162 CLPEDRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ 218
Query: 198 PENTTH---ISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
P+ + GT ++APE + K DV+S ++L +++G
Sbjct: 219 PDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 25/180 (13%)
Query: 114 CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDI 173
C +++ + M L + +E+ F + EI+ IG + ++H ++ HRD+
Sbjct: 100 CLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV 154
Query: 174 KTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSD 230
K N+L +++ K++DFG +K E T + T Y+APE + + D
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 211
Query: 231 VYSFGVLLLEIVSG------------RTAVDFDVQLGEYHLVDKAWGMY--NSKELMNLV 276
++S GV++ ++ G + ++LG+Y + W ++K+L+ L+
Sbjct: 212 MWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLL 271
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVN--- 96
++ + IG G FG R Q +VAVK + ++GEK + E +N
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI----ERGEK--IDENVKREIINHRS 71
Query: 97 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
+ H N+V+ + +V +Y L + + +F R + G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA----GRFSEDEARFFFQQLISG 127
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNP--KISDFGLSKLFPENTTHISTRVAGTLGY 214
++Y H V HRD+K N LLD + P KI FG SK ++ ST GT Y
Sbjct: 128 VSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAY 182
Query: 215 LAPEYAISGRLTRK-SDVYSFGVLLLEIVSG 244
+APE + K +DV+S GV L ++ G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 28/168 (16%)
Query: 148 EIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTR 207
+I + I + L ++H ++ V+HRD+K SN+L++ K DFG+S ++
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID- 196
Query: 208 VAGTLGYLAPEYAISGRLTR-----KSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDK 262
AG Y APE I+ L + KSD++S G+ +E+ R D
Sbjct: 197 -AGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYD------------- 241
Query: 263 AWG--MYNSKELMNLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLRP 308
+WG K+++ P L + E + F C+++ SK RP
Sbjct: 242 SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS---QCLKKNSKERP 286
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 25/180 (13%)
Query: 114 CRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDI 173
C +++ + M L + +E+ F + EI+ IG + ++H ++ HRD+
Sbjct: 81 CLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV 135
Query: 174 KTSNILL---DQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTRKSD 230
K N+L +++ K++DFG +K E T + T Y+APE + + D
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 192
Query: 231 VYSFGVLLLEIVSG------------RTAVDFDVQLGEYHLVDKAWGMY--NSKELMNLV 276
++S GV++ ++ G + ++LG+Y + W ++K+L+ L+
Sbjct: 193 MWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLL 252
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 24/212 (11%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVN--- 96
++ + IG G FG R Q +VAVK + ++GEK + E +N
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI----ERGEK--IDENVKREIINHRS 71
Query: 97 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
+ H N+V+ + +V +Y L + + +F R + G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA----GRFSEDEARFFFQQLISG 127
Query: 157 LAYIHEEIQPHVVHRDIKTSNILLDQNFNP--KISDFGLSKLFPENTTHISTR-VAGTLG 213
++Y H V HRD+K N LLD + P KI FG SK + H + GT
Sbjct: 128 VSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPA 181
Query: 214 YLAPEYAISGRLTRK-SDVYSFGVLLLEIVSG 244
Y+APE + K +DV+S GV L ++ G
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 42 NGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHE 100
N FR KIG G FG +Y G +Q VA+K+ +V++K + + S++ +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIP 66
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N V+ G ++G +LV D + SL + L R K K + + + ++
Sbjct: 67 N-VRWFG--VEGDYNVLVMDLL-GPSL-EDLFNFCSR--KLSLKTVLMLADQMINRVEFV 119
Query: 161 HEEIQPHVVHRDIKTSNILL------DQNFNPKISDFGLSKLFPENTT--HISTR----V 208
H + +HRDIK N L+ +Q + I DFGL+K + + +T HI R +
Sbjct: 120 HSK---SFLHRDIKPDNFLMGLGRRANQVY---IIDFGLAKKYRDTSTHQHIPYRENKNL 173
Query: 209 AGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
GT Y + + +R+ D+ S G +L+ + G
Sbjct: 174 TGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ +T + T T Y APE +
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLART--ASTNFMMTPYVVTRYYRAPEVILGMGYKE 202
Query: 228 KSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYGNFPEN 287
D++S G ++ E+V G + +++ V + G S E M + P + N+ EN
Sbjct: 203 NVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGT-PSAEFMAALQPTV-RNYVEN 260
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 41 TNGFRWSNKIGEGGFGSVYKGRLQ-DGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCH 99
++ + + IG G FG R + +VAVK + + E E+ + ++ H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN-VQREIINHRSLR--H 75
Query: 100 ENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAY 159
N+V+ + ++ +Y L + + +F R + G++Y
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNA----GRFSEDEARFFFQQLLSGVSY 131
Query: 160 IHEEIQPHVVHRDIKTSNILLDQNFNP--KISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
H + HRD+K N LLD + P KI DFG SK ++ ST GT Y+AP
Sbjct: 132 CHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAP 186
Query: 218 EYAISGRLTRK-SDVYSFGVLLLEIVSG 244
E + K +DV+S GV L ++ G
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLH 106
+IG GG V++ + I A+K +++E Q + +E+A + + + +++L+
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
I +V + N L+ L +K+++ W+ R+ + + IH Q
Sbjct: 95 DYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWE-RKSYWKNMLEAVHTIH---QH 146
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+ PE
Sbjct: 147 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 226 TRKS-----------DVYSFGVLLLEIVSGRT 246
+R++ DV+S G +L + G+T
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 48/227 (21%)
Query: 50 IGEGGFGSV-YKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMA----NVNVCHENLVK 104
+G G G+V ++G Q G VAVK + ++ ++A M + H N+++
Sbjct: 23 LGYGSSGTVVFQGSFQ-GRPVAVKRMLID--------FCDIALMEIKLLTESDDHPNVIR 73
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARRE-----IIMGIGRGLAY 159
+ C + R L Y + +L+ L E K + K ++E ++ I G+A+
Sbjct: 74 YY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 160 IHEEIQPHVVHRDIKTSNILLD-------------QNFNPKISDFGLSKLFPENTTHIST 206
+H ++HRD+K NIL+ +N ISDFGL K + T
Sbjct: 131 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 207 RV---AGTLGYLAPE-------YAISGRLTRKSDVYSFGVLLLEIVS 243
+ +GT G+ APE RLTR D++S G + I+S
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLH 106
+IG GG V++ + I A+K +++E Q + +E+A + + + +++L+
Sbjct: 19 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
I +V + N L+ L +K+++ W+ R+ + + IH Q
Sbjct: 79 DYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWE-RKSYWKNMLEAVHTIH---QH 130
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+ PE
Sbjct: 131 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 226 TRKS-----------DVYSFGVLLLEIVSGRTA 247
+R++ DV+S G +L + G+T
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFMMTPYVVTRYYRAPEVILGMGYAA 204
Query: 228 KSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYNSKELMNLVDPMLYG---NF 284
D++S G ++ E+V G + +++ V + G S E M + P + N
Sbjct: 205 NVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGT-PSAEFMAALQPTVRNYVENR 263
Query: 285 PENEAIRF 292
P+ I+F
Sbjct: 264 PKYPGIKF 271
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 50 IGEGGFGSVYKG-RLQDGTIVAVKVLSV----ESKQGEKEFMSEVASMANVNVCHENLVK 104
IG+G F V + + G AVK++ V S E + AS+ ++ + H ++V+
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM-LKHPHIVE 90
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEI 164
L +V+++M L ++ + + I L Y H+
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 149
Query: 165 QPHVVHRDIKTSNILL--DQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAI 221
+++HRD+K N+LL +N P K+ DFG++ E+ RV GT ++APE
Sbjct: 150 --NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAPEVVK 206
Query: 222 SGRLTRKSDVYSFGVLLLEIVSG 244
+ DV+ GV+L ++SG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S GV++ E++ G
Sbjct: 205 NVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S GV++ E++ G
Sbjct: 205 NVDIWSVGVIMGEMIKG 221
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 168 VVHRDIKTSNILLDQNFNP-KISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLT 226
V+HRDIK NIL+D N K+ DFG L + + T GT Y PE+ R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYH 234
Query: 227 -RKSDVYSFGVLLLEIVSGRTAVDFDVQL 254
R + V+S G+LL ++V G + D ++
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 141 FGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ---NFNPKISDFGLSKLF 197
F + EI IG + Y+H ++ HRD+K N+L N K++DFG +K
Sbjct: 158 FTEREASEIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-- 212
Query: 198 PENTTHIS-TRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIVSG 244
E T+H S T T Y+APE + + D +S GV+ ++ G
Sbjct: 213 -ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLH 106
+IG GG V++ + I A+K +++E Q + +E+A + + + +++L+
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
I +V + N L+ L +K+++ W+ R+ + + IH Q
Sbjct: 123 DYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWE-RKSYWKNMLEAVHTIH---QH 174
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+ PE
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 226 TRKS-----------DVYSFGVLLLEIVSGRTAVDFDV-QLGEYHLVDKAWGMYNSKELM 273
+R++ DV+S G +L + G+T + Q+ + H +
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI------------- 280
Query: 274 NLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLR 307
+DP FP+ V C++ K R
Sbjct: 281 --IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 40 ATNGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQG--EKEFMSEVASMANVN 96
+ + +R K+GEG +G VYK VA+K + +E ++ + EV+ + +
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 97 VCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRG 156
H N+++L L+++Y N+ L + + + + + G
Sbjct: 92 --HRNIIELKSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLING 144
Query: 157 LAYIHEEIQPHVVHRDIKTSNILL---DQNFNP--KISDFGLSKLFPENTTHISTRVAGT 211
+ + H +HRD+K N+LL D + P KI DFGL++ F + + T
Sbjct: 145 VNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-T 200
Query: 212 LGYLAPEYAISGRLTRKS-DVYSFGVLLLEIV 242
L Y PE + R S D++S + E++
Sbjct: 201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLH 106
+IG GG V++ + I A+K +++E Q + +E+A + + + +++L+
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
I +V + N L+ L +K+++ W+ R+ + + IH Q
Sbjct: 75 DYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWE-RKSYWKNMLEAVHTIH---QH 126
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+ PE
Sbjct: 127 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 226 TRKS-----------DVYSFGVLLLEIVSGRT 246
+R++ DV+S G +L + G+T
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKT 217
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLH 106
+IG GG V++ + I A+K +++E Q + +E+A + + + +++L+
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
I +V + N L+ L +K+++ W+ R+ + + IH Q
Sbjct: 76 DYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWE-RKSYWKNMLEAVHTIH---QH 127
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+ PE
Sbjct: 128 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 226 TRKS-----------DVYSFGVLLLEIVSGRT 246
+R++ DV+S G +L + G+T
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKT 218
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 44/223 (19%)
Query: 50 IGEGGFGSV-YKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMA----NVNVCHENLVK 104
+G G G+V ++G Q G VAVK + ++ ++A M + H N+++
Sbjct: 41 LGYGSSGTVVFQGSFQ-GRPVAVKRMLID--------FCDIALMEIKLLTESDDHPNVIR 91
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARRE-----IIMGIGRGLAY 159
+ C + R L Y + +L+ L E K + K ++E ++ I G+A+
Sbjct: 92 YY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 160 IHEEIQPHVVHRDIKTSNILLD-------------QNFNPKISDFGLSKLFPENTTHIST 206
+H ++HRD+K NIL+ +N ISDFGL K
Sbjct: 149 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 207 RV---AGTLGYLAPEY---AISGRLTRKSDVYSFGVLLLEIVS 243
+ +GT G+ APE + RLTR D++S G + I+S
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLH 106
+IG GG V++ + I A+K +++E Q + +E+A + + + +++L+
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
I +V + N L+ L +K+++ W+ R+ + + IH Q
Sbjct: 123 DYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWE-RKSYWKNMLEAVHTIH---QH 174
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+VH D+K +N L+ K+ DFG++ ++ P+ T+ + GT+ Y+ PE
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 226 TRKS-----------DVYSFGVLLLEIVSGRTAVDFDV-QLGEYHLVDKAWGMYNSKELM 273
+R++ DV+S G +L + G+T + Q+ + H +
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI------------- 280
Query: 274 NLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLR 307
+DP FP+ V C++ K R
Sbjct: 281 --IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 44/223 (19%)
Query: 50 IGEGGFGSV-YKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMA----NVNVCHENLVK 104
+G G G+V ++G Q G VAVK + ++ ++A M + H N+++
Sbjct: 41 LGYGSSGTVVFQGSFQ-GRPVAVKRMLID--------FCDIALMEIKLLTESDDHPNVIR 91
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARRE-----IIMGIGRGLAY 159
+ C + R L Y + +L+ L E K + K ++E ++ I G+A+
Sbjct: 92 YY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 160 IHEEIQPHVVHRDIKTSNILLD-------------QNFNPKISDFGLSKLFPENTTHIST 206
+H ++HRD+K NIL+ +N ISDFGL K
Sbjct: 149 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 207 RV---AGTLGYLAPEY---AISGRLTRKSDVYSFGVLLLEIVS 243
+ +GT G+ APE + RLTR D++S G + I+S
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 110/273 (40%), Gaps = 43/273 (15%)
Query: 44 FRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENL 102
R + EGGF VY+ + + G A+K L ++ + + EV M ++ H N+
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS-GHPNI 88
Query: 103 VKLHGGCI-------DGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR 155
V+ G L+ + L + L + + R +I R
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVE-FLKKMESRGPLSCDTVLKIFYQTCR 147
Query: 156 GLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL---FPENTTHISTRVA--- 209
+ ++H + +P ++HRD+K N+LL K+ DFG + +P+ + R
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 210 -----GTLGYLAPE----YAISGRLTRKSDVYSFGVLL---------------LEIVSGR 245
T Y PE Y+ + + K D+++ G +L L IV+G+
Sbjct: 207 EITRNTTPMYRTPEIIDLYS-NFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK 265
Query: 246 TAV-DFDVQLGEYHLVDKAWGMYNSKELMNLVD 277
++ D Q +H + +A N +E +++ +
Sbjct: 266 YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAE 298
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 28/250 (11%)
Query: 44 FRWSNKIGEGGFGSVYKGRLQD-GTIVAVK--VLSVESKQGEKEFMSEVASMANVNVCHE 100
F+ G+G FG+V G+ + G VA+K + + E + M ++A + H
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH-----HP 79
Query: 101 NLVKLHG-----GCIDGPCRIL--VYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGI 153
N+V+L G D L V +Y+P+ +L + +R+ + + +
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 154 GRGLAYIHEEIQPHVVHRDIKTSNILLDQ-NFNPKISDFGLS-KLFPE--NTTHISTRVA 209
R + +H +V HRDIK N+L+++ + K+ DFG + KL P N +I +R
Sbjct: 139 IRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY- 196
Query: 210 GTLGYLAPEYAISGR-LTRKSDVYSFGVLLLEIVSGRTAVDFDVQLGEYHLVDKAWGMYN 268
Y APE + T D++S G + E++ G D G+ H + + G
Sbjct: 197 ----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC-P 251
Query: 269 SKELMNLVDP 278
S+E++ ++P
Sbjct: 252 SREVLRKLNP 261
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G G FG V++ + Q G AVK + +E + E E+ + A ++ +V L+G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLS--SPRIVPLYG 117
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEI 164
+GP + + + SL Q + + G + +G+ GL Y+H
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRALYYLGQALEGLEYLHTR- 169
Query: 165 QPHVVHRDIKTSNILLDQNFN-PKISDFGLS-KLFPE---NTTHISTRVAGTLGYLAPEY 219
++H D+K N+LL + + + DFG + L P+ + + GT ++APE
Sbjct: 170 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ K D++S ++L +++G
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S G ++ E++ G
Sbjct: 206 NVDIWSVGCIMGEMIKG 222
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 138 RAKFGWKARREIIMGIGR----GLAYIHEEIQPHVVHRDIKTSNILLDQN--FNPKISDF 191
R + R ++I I R L Y+H + + HRDIK N L N F K+ DF
Sbjct: 158 RESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDF 214
Query: 192 GLSKLFPE---NTTHISTRVAGTLGYLAPEY--AISGRLTRKSDVYSFGVLLLEIVSGRT 246
GLSK F + + T AGT ++APE + K D +S GVLL ++ G
Sbjct: 215 GLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG-- 272
Query: 247 AVDF 250
AV F
Sbjct: 273 AVPF 276
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G G FG V++ + Q G AVK + +E + E E+ + A ++ +V L+G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLS--SPRIVPLYG 133
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEI 164
+GP + + + SL Q + + G + +G+ GL Y+H
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRALYYLGQALEGLEYLHTR- 185
Query: 165 QPHVVHRDIKTSNILLDQNFN-PKISDFGLS-KLFPE---NTTHISTRVAGTLGYLAPEY 219
++H D+K N+LL + + + DFG + L P+ + + GT ++APE
Sbjct: 186 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ K D++S ++L +++G
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 49 KIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
++G G FG V++ + Q G AVK + +E + E E+ + A ++ +V L+G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLS--SPRIVPLYG 131
Query: 108 GCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGR---GLAYIHEEI 164
+GP + + + SL Q + + G + +G+ GL Y+H
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRALYYLGQALEGLEYLHTR- 183
Query: 165 QPHVVHRDIKTSNILLDQNFN-PKISDFGLS-KLFPE---NTTHISTRVAGTLGYLAPEY 219
++H D+K N+LL + + + DFG + L P+ + + GT ++APE
Sbjct: 184 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 220 AISGRLTRKSDVYSFGVLLLEIVSG 244
+ K D++S ++L +++G
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 47 SNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEK---EFMSEVASMANVNVCHENL 102
S ++G G F V + G A K L + ++G+ E + E+A + C +
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLK-KRRRGQDCRAEILHEIAVLELAKSC-PRV 91
Query: 103 VKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHE 162
+ LH + IL+ +Y + L E R +I I G+ Y+H
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIR--LIKQILEGVYYLH- 148
Query: 163 EIQPHVVHRDIKTSNILLDQNF---NPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEY 219
Q ++VH D+K NILL + + KI DFG+S+ + GT YLAPE
Sbjct: 149 --QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEI 204
Query: 220 AISGRLTRKSDVYSFGVL 237
+T +D+++ G++
Sbjct: 205 LNYDPITTATDMWNIGII 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 44/244 (18%)
Query: 34 YNQLKIATNGFRWSNKIGEGGFGSVY--KGRLQDGTIVAVKVLSVESKQGEKEFMSEVAS 91
Y + +N F+ +KIGEG F SVY +LQ G + + + +E+
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 92 MANVNVCHENLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM 151
+ V +N++ + ++ Y+ + S L ++ RE ++
Sbjct: 73 L-TVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-------NSLSFQEVREYML 124
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNP-KISDFGLSK--------------- 195
+ + L IH Q +VHRD+K SN L ++ + DFGL++
Sbjct: 125 NLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 196 -------------LFPENTTHISTRVAGTLGYLAPEYAI-SGRLTRKSDVYSFGVLLLEI 241
+ ++ R AGT G+ APE T D++S GV+ L +
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPR-AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240
Query: 242 VSGR 245
+SGR
Sbjct: 241 LSGR 244
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 116/274 (42%), Gaps = 39/274 (14%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLH 106
+IG GG V++ + I A+K +++E Q + +E+A + + + +++L+
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
I +V + N L+ L +K+++ W+ R+ + + IH Q
Sbjct: 123 DYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWE-RKSYWKNMLEAVHTIH---QH 174
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+VH D+K +N L+ K+ DFG++ ++ P+ T+ + G + Y+ PE
Sbjct: 175 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 226 TRKS-----------DVYSFGVLLLEIVSGRTAVDFDV-QLGEYHLVDKAWGMYNSKELM 273
+R++ DV+S G +L + G+T + Q+ + H +
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI------------- 280
Query: 274 NLVDPMLYGNFPENEAIRFLKVGLLCVQEKSKLR 307
+DP FP+ V C++ K R
Sbjct: 281 --IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 243 NVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 198 NVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 206 NVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 205
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 206 NVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 42 NGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHE 100
N +R KIG G FG +Y G + G VA+K+ V++K + S++ M V
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGV--- 65
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
+ + +G ++V + + SL + L R KF K + + + YI
Sbjct: 66 GIPTIRWCGAEGDYNVMVMELL-GPSL-EDLFNFCSR--KFSLKTVLLLADQMISRIEYI 121
Query: 161 HEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTT--HISTR----VAGT 211
H + + +HRD+K N L+ + I DFGL+K + + T HI R + GT
Sbjct: 122 HSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 178
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLL 239
Y + + +R+ D+ S G +L+
Sbjct: 179 ARYASINTHLGIEQSRRDDLESLGYVLM 206
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 242
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 243 NVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 199 NVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 199 NVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 203
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 204 NVDIWSVGCIMGEMVRHKILFPGRDYID 231
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 197
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 198 NVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 42 NGFRWSNKIGEGGFGSVYKGR-LQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHE 100
N +R KIG G FG +Y G + G VA+K+ V++K + S++ M V
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGV--- 63
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
+ + +G ++V + + SL + L R KF K + + + YI
Sbjct: 64 GIPTIRWCGAEGDYNVMVMELL-GPSL-EDLFNFCSR--KFSLKTVLLLADQMISRIEYI 119
Query: 161 HEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTT--HISTR----VAGT 211
H + + +HRD+K N L+ + I DFGL+K + + T HI R + GT
Sbjct: 120 HSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 176
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLL 239
Y + + +R+ D+ S G +L+
Sbjct: 177 ARYASINTHLGIEQSRRDDLESLGYVLM 204
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 228 KSDVYSFGVLLLEIV------SGRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 205 NVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 169 VHRDIKTSNILLDQNFNPKISDFGL-SKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
HRD+K NIL+ + + DFG+ S E T + V GTL Y APE T
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATY 214
Query: 228 KSDVYSFGVLLLEIVSG 244
++D+Y+ +L E ++G
Sbjct: 215 RADIYALTCVLYECLTG 231
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T Y APE +
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYRAPEVILGMGYKE 206
Query: 228 KSDVYSFGVLLLEIVSG 244
D++S G ++ E++ G
Sbjct: 207 NVDIWSVGCIMGEMIKG 223
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 149 IIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQNFNPKISDFGLSKL------------ 196
I + I + ++H + ++HRD+K SNI + K+ DFGL
Sbjct: 169 IFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 197 -FPENTTHISTRVAGTLGYLAPEYAISGRLTRKSDVYSFGVLLLEIV 242
P TH GT Y++PE + K D++S G++L E++
Sbjct: 226 PMPAYATHXGQ--VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 48/227 (21%)
Query: 50 IGEGGFGSV-YKGRLQDGTIVAVKVLSVESKQGEKEFMSEVASMA----NVNVCHENLVK 104
+G G G+V ++G Q G VAVK + ++ ++A M + H N+++
Sbjct: 23 LGYGSSGTVVFQGSFQ-GRPVAVKRMLID--------FCDIALMEIKLLTESDDHPNVIR 73
Query: 105 LHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARRE-----IIMGIGRGLAY 159
+ C + R L Y + +L+ L E K + K ++E ++ I G+A+
Sbjct: 74 YY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 160 IHEEIQPHVVHRDIKTSNILLD-------------QNFNPKISDFGLSKLFPENTTHIST 206
+H ++HRD+K NIL+ +N ISDFGL K
Sbjct: 131 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 207 RV---AGTLGYLAPE-------YAISGRLTRKSDVYSFGVLLLEIVS 243
+ +GT G+ APE RLTR D++S G + I+S
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 198
Query: 228 KSDVYSFGVLLLEIVS------GRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 199 NVDLWSVGCIMGEMVCHKILFPGRDYID 226
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 168 VVHRDIKTSNILLDQNFNPKISDFGLSKLFPENTTHISTRVAGTLGYLAPEYAISGRLTR 227
++HRD+K SNI++ + KI DFGL++ T+ + T T Y APE +
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKE 209
Query: 228 KSDVYSFGVLLLEIVS------GRTAVD 249
D++S G ++ E+V GR +D
Sbjct: 210 NVDLWSVGCIMGEMVCHKILFPGRDYID 237
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 42 NGFRWSNKIGEGGFGSVYKG-RLQDGTIVAVKVLSVESKQGEKEFMSEVASMANVNVCHE 100
N +R KIG G FG +Y G + G VA+K+ V++K + S+ M V
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIP 68
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
+ +K G +G ++V + + SL + L R KF K + + + YI
Sbjct: 69 S-IKWCGA--EGDYNVMVMELL-GPSL-EDLFNFCSR--KFSLKTVLLLADQMISRIEYI 121
Query: 161 HEEIQPHVVHRDIKTSNILL---DQNFNPKISDFGLSKLFPENTT--HISTR----VAGT 211
H + + +HRD+K N L+ + I DFGL+K + + T HI R + GT
Sbjct: 122 HSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 178
Query: 212 LGYLAPEYAISGRLTRKSDVYSFGVLLL 239
Y + + +R+ D+ S G +L+
Sbjct: 179 ARYASINTHLGIEQSRRDDLESLGYVLM 206
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVLSVE--SKQGEKEFMSEVASMANVNVCHENLVKLH 106
+IG GG V++ + I A+K +++E Q + +E+A + + + +++L+
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 107 GGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQP 166
I +V + N L+ L +K+++ W+ R+ + + IH Q
Sbjct: 95 DYEITDQYIYMVME-CGNIDLNSWL---KKKKSIDPWE-RKSYWKNMLEAVHTIH---QH 146
Query: 167 HVVHRDIKTSNILLDQNFNPKISDFGLS-KLFPENTTHISTRVAGTLGYLAPEYAISGRL 225
+VH D+K +N L+ K+ DFG++ ++ P+ + GT+ Y+ PE
Sbjct: 147 GIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 226 TRKS-----------DVYSFGVLLLEIVSGRT 246
+R++ DV+S G +L + G+T
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 60/214 (28%)
Query: 130 TLLGEEKRRAKFGWKARREIIMGIGRGLAYIHEEIQPHVVHRDIKTSNILLDQ--NFNP- 186
++L +R F ++ + L ++H + + HRD+K NIL + +P
Sbjct: 97 SILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPV 153
Query: 187 KISDFGLSK-------LFPENTTHISTRVAGTLGYLAPEY--AISGRLT---RKSDVYSF 234
KI DFGL P +T + T G+ Y+APE A S + ++ D++S
Sbjct: 154 KICDFGLGSGIKLNGDCSPISTPELLTP-CGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 235 GVLLLEIVS------GRTAVDF-----------------DVQLGEYHLVDKAWGMYN--S 269
GV+L ++S GR D +Q G+Y DK W + +
Sbjct: 213 GVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAA 272
Query: 270 KELMN----------------LVDPMLYGNFPEN 287
K+L++ L P + G PEN
Sbjct: 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN 306
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 49 KIGEGGFGSVYKGRLQDGTIVAVKVL-SVESKQGEKEFMSEVASMANVNVCHENLVKLHG 107
K+G G +G VYK + +DG L +E E+A + + H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELK--HPNVISLQK 85
Query: 108 GCIDGPCR--ILVYDYMPNNSLS----QTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
+ R L++DY ++ K+ + + ++ I G+ Y+H
Sbjct: 86 VFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 162 EEIQPHVVHRDIKTSNILL----DQNFNPKISDFGLSKLF--PENTTHISTRVAGTLGYL 215
V+HRD+K +NIL+ + KI+D G ++LF P V T Y
Sbjct: 146 ANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYR 202
Query: 216 APEYAISGR-LTRKSDVYSFGVLLLEIVSG 244
APE + R T+ D+++ G + E+++
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 48 NKIGEGGFGSVYKGRLQD-GTIVAVKVL----SVESKQG--EKEFMSEVASMANVNVCHE 100
++G G F V K R + G A K + S S++G +E EV+ + V H
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV--LHH 75
Query: 101 NLVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYI 160
N++ LH + +L+ + + L L +E + ++I+ G+ Y+
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN----YL 131
Query: 161 HEEIQPHVVHRDIKTSNI-LLDQNF---NPKISDFGLSKLFPENTTHISTRVAGTLGYLA 216
H + + H D+K NI LLD+N + K+ DFGL+ + + GT ++A
Sbjct: 132 HTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVA 186
Query: 217 PEYAISGRLTRKSDVYSFGVLLLEIVSG 244
PE L ++D++S GV+ ++SG
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 49 KIGEGGFGSVYKGRLQD-GTIVAVKVL----SVESKQG--EKEFMSEVASMANVNVCHEN 101
++G G F V K R + G A K + S S++G +E EV+ + V H N
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV--LHHN 76
Query: 102 LVKLHGGCIDGPCRILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIMGIGRGLAYIH 161
++ LH + +L+ + + L L +E + ++I+ G+ Y+H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN----YLH 132
Query: 162 EEIQPHVVHRDIKTSNI-LLDQNF---NPKISDFGLSKLFPENTTHISTRVAGTLGYLAP 217
+ + H D+K NI LLD+N + K+ DFGL+ + + GT ++AP
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAP 187
Query: 218 EYAISGRLTRKSDVYSFGVLLLEIVSG 244
E L ++D++S GV+ ++SG
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 30/225 (13%)
Query: 40 ATNGFRW--SNKIGEGGFGSVYKGRLQD-GTIVAVKVLS-VESKQGEKEFMSEVASMANV 95
+T+ W S+ +G+G +V++GR + G + A+KV + + + M E + +
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64
Query: 96 NVCHENLVKLHGGCIDGPCR--ILVYDYMPNNSLSQTLLGEEKRRAKFGWKARREIIM-- 151
N H+N+VKL + R +L+ ++ P SL L EE A +G +I+
Sbjct: 65 N--HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNA-YGLPESEFLIVLR 119
Query: 152 GIGRGLAYIHEEIQPHVVHRDIKTSNILL----DQNFNPKISDFGLSKLFPENTTHISTR 207
+ G+ ++ E +VHR+IK NI+ D K++DFG ++ ++ +S
Sbjct: 120 DVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS-- 174
Query: 208 VAGTLGYLAP---EYAISGRLTRKS-----DVYSFGVLLLEIVSG 244
+ GT YL P E A+ + +K D++S GV +G
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,378,451
Number of Sequences: 62578
Number of extensions: 434491
Number of successful extensions: 3310
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 1082
Number of HSP's gapped (non-prelim): 1136
length of query: 358
length of database: 14,973,337
effective HSP length: 100
effective length of query: 258
effective length of database: 8,715,537
effective search space: 2248608546
effective search space used: 2248608546
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)