Query 018265
Match_columns 358
No_of_seqs 183 out of 1302
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 07:32:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018265.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018265hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01337 MDH_glyoxysomal_mitoch 100.0 5.7E-69 1.2E-73 512.6 32.2 309 47-356 1-310 (310)
2 TIGR01772 MDH_euk_gproteo mala 100.0 1.8E-68 3.9E-73 510.0 31.5 310 48-357 1-311 (312)
3 COG0039 Mdh Malate/lactate deh 100.0 3.5E-67 7.6E-72 495.4 29.1 297 47-357 1-312 (313)
4 PLN00106 malate dehydrogenase 100.0 2.7E-66 5.9E-71 496.8 34.6 317 34-350 6-322 (323)
5 PTZ00325 malate dehydrogenase; 100.0 1E-63 2.2E-68 478.7 33.2 313 44-358 6-319 (321)
6 cd05290 LDH_3 A subgroup of L- 100.0 9.3E-64 2E-68 477.5 28.8 286 48-349 1-306 (307)
7 PRK05086 malate dehydrogenase; 100.0 1.1E-62 2.3E-67 472.0 33.7 310 47-358 1-312 (312)
8 TIGR01759 MalateDH-SF1 malate 100.0 4.2E-63 9E-68 475.5 29.4 296 45-352 2-323 (323)
9 cd05293 LDH_1 A subgroup of L- 100.0 8.7E-63 1.9E-67 472.1 29.5 290 46-350 3-311 (312)
10 KOG1495 Lactate dehydrogenase 100.0 1.5E-62 3.2E-67 444.1 25.7 290 46-353 20-330 (332)
11 PLN02602 lactate dehydrogenase 100.0 3.5E-62 7.6E-67 473.1 30.0 291 47-352 38-348 (350)
12 PRK05442 malate dehydrogenase; 100.0 1.2E-61 2.5E-66 466.0 28.3 298 45-355 3-325 (326)
13 PRK00066 ldh L-lactate dehydro 100.0 4.4E-61 9.5E-66 461.4 30.5 291 46-352 6-313 (315)
14 KOG1494 NAD-dependent malate d 100.0 1.4E-60 2.9E-65 433.3 31.7 337 9-357 3-340 (345)
15 TIGR01771 L-LDH-NAD L-lactate 100.0 1.7E-61 3.6E-66 460.9 26.0 281 51-347 1-299 (299)
16 PLN00112 malate dehydrogenase 100.0 7.2E-61 1.6E-65 473.3 30.2 300 44-356 98-424 (444)
17 cd00704 MDH Malate dehydrogena 100.0 8.9E-61 1.9E-65 460.0 27.8 294 47-353 1-323 (323)
18 TIGR01757 Malate-DH_plant mala 100.0 1.3E-60 2.9E-65 465.1 29.3 300 44-356 42-368 (387)
19 cd01338 MDH_choloroplast_like 100.0 4.9E-60 1.1E-64 454.6 28.5 296 45-353 1-321 (322)
20 PTZ00117 malate dehydrogenase; 100.0 2.9E-59 6.4E-64 449.8 31.9 297 45-355 4-317 (319)
21 cd05291 HicDH_like L-2-hydroxy 100.0 2.1E-59 4.5E-64 449.0 28.7 288 47-350 1-305 (306)
22 cd00300 LDH_like L-lactate deh 100.0 2.9E-59 6.4E-64 446.5 27.6 286 49-349 1-299 (300)
23 PTZ00082 L-lactate dehydrogena 100.0 1E-58 2.2E-63 445.9 31.2 292 45-350 5-318 (321)
24 TIGR01763 MalateDH_bact malate 100.0 1.5E-58 3.3E-63 442.1 28.5 288 47-350 2-303 (305)
25 TIGR01758 MDH_euk_cyt malate d 100.0 1.1E-57 2.4E-62 438.7 29.3 296 48-353 1-323 (324)
26 cd05292 LDH_2 A subgroup of L- 100.0 1.8E-57 4E-62 435.7 29.9 288 47-350 1-306 (308)
27 cd01336 MDH_cytoplasmic_cytoso 100.0 1E-57 2.2E-62 439.6 27.6 296 45-353 1-325 (325)
28 cd05295 MDH_like Malate dehydr 100.0 1.8E-56 4E-61 441.7 27.1 293 45-353 122-451 (452)
29 PLN00135 malate dehydrogenase 100.0 1.3E-55 2.8E-60 420.6 26.5 272 74-357 15-309 (309)
30 cd05294 LDH-like_MDH_nadp A la 100.0 3.1E-55 6.6E-60 420.2 28.9 291 47-351 1-308 (309)
31 cd01339 LDH-like_MDH L-lactate 100.0 2.7E-55 5.9E-60 419.6 28.3 287 49-349 1-299 (300)
32 PRK06223 malate dehydrogenase; 100.0 5.1E-55 1.1E-59 419.0 30.2 292 46-351 2-305 (307)
33 TIGR01756 LDH_protist lactate 100.0 1.2E-54 2.7E-59 414.9 26.6 273 74-356 17-312 (313)
34 cd00650 LDH_MDH_like NAD-depen 100.0 9.7E-51 2.1E-55 381.3 29.3 254 49-349 1-262 (263)
35 KOG1496 Malate dehydrogenase [ 100.0 4.3E-50 9.4E-55 357.6 20.5 305 44-357 2-331 (332)
36 PF02866 Ldh_1_C: lactate/mala 100.0 2.3E-33 5E-38 247.9 12.4 159 192-356 1-174 (174)
37 PF00056 Ldh_1_N: lactate/mala 100.0 9.2E-33 2E-37 235.8 12.4 139 47-190 1-141 (141)
38 cd05197 GH4_glycoside_hydrolas 100.0 2.5E-30 5.4E-35 257.0 25.3 279 47-350 1-389 (425)
39 PRK15076 alpha-galactosidase; 100.0 1.1E-30 2.3E-35 260.4 22.4 289 46-351 1-384 (431)
40 cd05296 GH4_P_beta_glucosidase 100.0 5.5E-30 1.2E-34 254.1 25.4 281 47-344 1-372 (419)
41 cd05298 GH4_GlvA_pagL_like Gly 100.0 1.6E-28 3.4E-33 244.5 26.6 286 47-352 1-394 (437)
42 COG1486 CelF Alpha-galactosida 100.0 2.4E-27 5.3E-32 231.7 21.3 293 44-352 1-397 (442)
43 cd05297 GH4_alpha_glucosidase_ 100.0 1.4E-26 2.9E-31 231.1 25.7 286 47-350 1-386 (423)
44 PF02056 Glyco_hydro_4: Family 99.8 2.8E-20 6E-25 164.2 14.0 152 48-209 1-183 (183)
45 COG1004 Ugd Predicted UDP-gluc 98.9 9E-08 2E-12 93.0 16.0 113 47-172 1-130 (414)
46 PF02737 3HCDH_N: 3-hydroxyacy 98.7 3.3E-08 7.2E-13 87.8 7.9 118 48-193 1-137 (180)
47 COG1250 FadB 3-hydroxyacyl-CoA 98.6 1.6E-07 3.4E-12 89.7 10.0 122 46-192 3-140 (307)
48 PRK07066 3-hydroxybutyryl-CoA 98.5 1.3E-06 2.7E-11 84.5 13.0 118 47-191 8-140 (321)
49 PF03721 UDPG_MGDP_dh_N: UDP-g 98.5 7.7E-07 1.7E-11 79.4 8.9 133 47-195 1-151 (185)
50 PRK15181 Vi polysaccharide bio 98.5 3.7E-06 8.1E-11 82.0 14.6 170 44-223 13-200 (348)
51 PRK07819 3-hydroxybutyryl-CoA 98.5 1.9E-06 4.2E-11 82.0 12.2 119 47-193 6-144 (286)
52 TIGR01915 npdG NADPH-dependent 98.4 6.9E-06 1.5E-10 75.1 14.2 102 47-168 1-106 (219)
53 PRK08125 bifunctional UDP-gluc 98.4 4.3E-06 9.2E-11 88.6 14.6 179 32-222 304-497 (660)
54 PRK08293 3-hydroxybutyryl-CoA 98.4 2.9E-06 6.2E-11 80.8 12.0 120 46-192 3-142 (287)
55 PLN00198 anthocyanidin reducta 98.4 7.6E-06 1.7E-10 79.2 15.0 175 45-222 8-202 (338)
56 PF02719 Polysacc_synt_2: Poly 98.4 1.9E-07 4.1E-12 88.4 3.1 120 49-169 1-138 (293)
57 TIGR02437 FadB fatty oxidation 98.4 1.5E-06 3.2E-11 92.6 10.0 120 45-192 312-450 (714)
58 PF01073 3Beta_HSD: 3-beta hyd 98.4 3.7E-06 7.9E-11 79.9 11.3 118 50-169 1-120 (280)
59 PLN02650 dihydroflavonol-4-red 98.4 9.4E-06 2E-10 79.0 14.5 177 45-223 4-198 (351)
60 PRK11730 fadB multifunctional 98.4 1.7E-06 3.8E-11 92.1 10.0 118 47-192 314-450 (715)
61 TIGR02441 fa_ox_alpha_mit fatt 98.3 2.4E-06 5.3E-11 91.2 11.0 119 45-191 334-471 (737)
62 COG1086 Predicted nucleoside-d 98.3 5.6E-06 1.2E-10 84.0 12.8 167 44-233 248-432 (588)
63 PLN02166 dTDP-glucose 4,6-dehy 98.3 5.7E-06 1.2E-10 83.4 12.9 171 46-222 120-297 (436)
64 TIGR02440 FadJ fatty oxidation 98.3 3.9E-06 8.5E-11 89.3 11.8 119 46-192 304-442 (699)
65 PRK11154 fadJ multifunctional 98.3 2.2E-06 4.8E-11 91.3 9.9 119 46-192 309-447 (708)
66 PLN02427 UDP-apiose/xylose syn 98.3 6.9E-06 1.5E-10 81.1 12.4 115 44-164 12-136 (386)
67 TIGR02622 CDP_4_6_dhtase CDP-g 98.3 1.4E-05 3.1E-10 77.8 14.4 176 44-222 2-193 (349)
68 KOG2304 3-hydroxyacyl-CoA dehy 98.3 1E-06 2.2E-11 79.5 5.4 122 45-192 10-154 (298)
69 PF01210 NAD_Gly3P_dh_N: NAD-d 98.3 3.1E-06 6.8E-11 73.3 8.1 94 48-163 1-103 (157)
70 PRK05808 3-hydroxybutyryl-CoA 98.2 1.9E-05 4.1E-10 74.9 13.5 118 47-192 4-140 (282)
71 PRK06035 3-hydroxyacyl-CoA deh 98.2 1E-05 2.2E-10 77.1 11.2 118 47-192 4-143 (291)
72 PLN02353 probable UDP-glucose 98.2 1.5E-05 3.2E-10 81.0 12.4 120 46-172 1-137 (473)
73 KOG1502 Flavonol reductase/cin 98.2 2.9E-05 6.4E-10 74.5 12.6 120 45-169 5-133 (327)
74 PLN02206 UDP-glucuronate decar 98.2 2.5E-05 5.4E-10 78.9 12.9 170 45-222 118-296 (442)
75 TIGR01181 dTDP_gluc_dehyt dTDP 98.1 4E-05 8.6E-10 72.6 13.3 167 48-222 1-184 (317)
76 PLN02695 GDP-D-mannose-3',5'-e 98.1 8.4E-06 1.8E-10 80.3 8.9 169 45-223 20-202 (370)
77 PLN02662 cinnamyl-alcohol dehy 98.1 5.9E-05 1.3E-09 72.1 14.5 114 46-162 4-125 (322)
78 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.1 1.6E-05 3.4E-10 81.5 9.8 121 46-193 5-143 (503)
79 PRK07530 3-hydroxybutyryl-CoA 98.1 2.1E-05 4.6E-10 75.0 10.0 123 45-195 3-144 (292)
80 COG1087 GalE UDP-glucose 4-epi 98.1 7.9E-05 1.7E-09 70.4 12.9 163 47-222 1-176 (329)
81 PRK08268 3-hydroxy-acyl-CoA de 98.0 1.8E-05 4E-10 81.2 9.2 121 47-195 8-147 (507)
82 PRK06129 3-hydroxyacyl-CoA deh 98.0 4.1E-05 8.9E-10 73.6 11.1 103 46-169 2-122 (308)
83 CHL00194 ycf39 Ycf39; Provisio 98.0 4.2E-05 9.2E-10 73.5 11.2 108 47-163 1-109 (317)
84 PRK10217 dTDP-glucose 4,6-dehy 98.0 9.3E-05 2E-09 72.0 13.7 176 47-223 2-195 (355)
85 COG0451 WcaG Nucleoside-diphos 98.0 3.1E-05 6.7E-10 73.4 10.1 167 47-224 1-178 (314)
86 PRK09260 3-hydroxybutyryl-CoA 98.0 2E-05 4.3E-10 75.0 8.7 99 47-167 2-119 (288)
87 PLN02572 UDP-sulfoquinovose sy 98.0 6.5E-05 1.4E-09 75.9 12.8 178 43-223 44-263 (442)
88 PLN02260 probable rhamnose bio 98.0 0.00013 2.9E-09 77.3 15.7 181 43-223 3-194 (668)
89 PRK06130 3-hydroxybutyryl-CoA 98.0 4.3E-05 9.4E-10 73.4 10.5 101 47-169 5-119 (311)
90 PRK11908 NAD-dependent epimera 98.0 6.2E-05 1.3E-09 73.2 11.5 161 46-222 1-183 (347)
91 PLN02545 3-hydroxybutyryl-CoA 98.0 7.3E-05 1.6E-09 71.3 11.5 103 47-169 5-123 (295)
92 TIGR03589 PseB UDP-N-acetylglu 98.0 8.4E-05 1.8E-09 71.8 12.0 114 45-163 3-124 (324)
93 PRK10084 dTDP-glucose 4,6 dehy 98.0 9.5E-05 2.1E-09 71.8 12.4 176 47-223 1-202 (352)
94 PRK07531 bifunctional 3-hydrox 98.0 7.1E-05 1.5E-09 76.7 11.8 103 47-170 5-121 (495)
95 PLN02214 cinnamoyl-CoA reducta 97.9 0.00019 4.1E-09 69.9 14.0 170 46-223 10-196 (342)
96 COG2085 Predicted dinucleotide 97.9 9.5E-05 2.1E-09 66.6 10.8 97 46-167 1-97 (211)
97 PTZ00345 glycerol-3-phosphate 97.9 0.00011 2.5E-09 72.2 12.3 108 30-163 1-129 (365)
98 PRK06194 hypothetical protein; 97.9 0.00036 7.8E-09 65.6 15.3 160 45-220 5-192 (287)
99 TIGR01472 gmd GDP-mannose 4,6- 97.9 0.00022 4.7E-09 69.2 13.2 156 47-211 1-178 (343)
100 PLN02989 cinnamyl-alcohol dehy 97.9 0.00046 1E-08 66.2 15.1 175 46-222 5-198 (325)
101 TIGR03026 NDP-sugDHase nucleot 97.9 0.00025 5.3E-09 71.0 13.6 119 47-179 1-137 (411)
102 COG0240 GpsA Glycerol-3-phosph 97.9 0.00039 8.4E-09 66.9 14.0 97 46-163 1-105 (329)
103 TIGR03466 HpnA hopanoid-associ 97.8 0.00014 3.1E-09 69.4 11.3 112 47-164 1-113 (328)
104 PLN02778 3,5-epimerase/4-reduc 97.8 0.00035 7.7E-09 66.8 13.1 90 45-156 8-104 (298)
105 PLN02896 cinnamyl-alcohol dehy 97.8 0.00025 5.4E-09 69.1 12.2 173 46-223 10-211 (353)
106 PF03807 F420_oxidored: NADP o 97.8 6.4E-05 1.4E-09 59.1 6.5 94 48-165 1-96 (96)
107 PRK10675 UDP-galactose-4-epime 97.8 0.00031 6.8E-09 67.7 12.5 114 47-163 1-123 (338)
108 PRK15057 UDP-glucose 6-dehydro 97.8 0.0003 6.5E-09 69.9 12.5 114 47-172 1-127 (388)
109 PLN02986 cinnamyl-alcohol dehy 97.8 0.00075 1.6E-08 64.7 14.9 175 46-222 5-197 (322)
110 PLN02653 GDP-mannose 4,6-dehyd 97.7 0.00028 6E-09 68.3 11.6 162 42-210 2-183 (340)
111 PRK00094 gpsA NAD(P)H-dependen 97.7 0.00021 4.7E-09 68.7 10.7 99 46-168 1-110 (325)
112 PRK11150 rfaD ADP-L-glycero-D- 97.7 0.00031 6.8E-09 66.9 11.6 160 49-222 2-174 (308)
113 PF13460 NAD_binding_10: NADH( 97.7 0.00062 1.3E-08 59.6 11.9 93 49-163 1-97 (183)
114 TIGR01777 yfcH conserved hypot 97.7 0.00017 3.7E-09 67.6 8.7 98 49-155 1-102 (292)
115 PLN02583 cinnamoyl-CoA reducta 97.7 0.001 2.2E-08 63.4 14.1 114 46-163 6-127 (297)
116 PRK09987 dTDP-4-dehydrorhamnos 97.7 0.0002 4.3E-09 68.4 9.1 99 47-163 1-103 (299)
117 PRK06522 2-dehydropantoate 2-r 97.7 0.00086 1.9E-08 63.8 13.2 102 47-170 1-107 (304)
118 PF03446 NAD_binding_2: NAD bi 97.6 0.00034 7.3E-09 60.9 9.5 65 46-122 1-65 (163)
119 PLN02253 xanthoxin dehydrogena 97.6 0.0014 3E-08 61.5 14.3 148 44-208 16-187 (280)
120 PLN03209 translocon at the inn 97.6 0.00066 1.4E-08 70.1 12.9 116 45-163 79-207 (576)
121 PRK14619 NAD(P)H-dependent gly 97.6 0.00045 9.7E-09 66.4 10.9 79 46-165 4-84 (308)
122 PRK12921 2-dehydropantoate 2-r 97.6 0.00082 1.8E-08 64.1 12.6 120 47-195 1-128 (305)
123 PRK11064 wecC UDP-N-acetyl-D-m 97.6 0.0005 1.1E-08 69.0 11.4 111 44-172 1-129 (415)
124 PRK13394 3-hydroxybutyrate deh 97.6 0.0013 2.8E-08 60.7 13.4 158 45-220 6-186 (262)
125 PRK08229 2-dehydropantoate 2-r 97.6 0.00045 9.8E-09 67.1 10.7 101 46-169 2-113 (341)
126 PRK15182 Vi polysaccharide bio 97.6 0.0011 2.3E-08 66.8 13.5 112 44-171 4-129 (425)
127 PRK12439 NAD(P)H-dependent gly 97.6 0.00034 7.4E-09 68.3 9.7 100 44-168 5-116 (341)
128 PRK14620 NAD(P)H-dependent gly 97.6 0.00051 1.1E-08 66.4 10.8 98 47-168 1-111 (326)
129 PRK12829 short chain dehydroge 97.5 0.0024 5.3E-08 58.9 14.3 38 43-82 8-45 (264)
130 PRK06249 2-dehydropantoate 2-r 97.5 0.00044 9.6E-09 66.6 9.5 123 43-194 2-131 (313)
131 TIGR03376 glycerol3P_DH glycer 97.5 0.00072 1.6E-08 66.0 10.7 96 48-163 1-116 (342)
132 PLN02240 UDP-glucose 4-epimera 97.5 0.0019 4.2E-08 62.5 13.7 116 45-163 4-131 (352)
133 PRK08267 short chain dehydroge 97.5 0.0016 3.5E-08 60.3 12.5 117 47-166 2-138 (260)
134 PRK07201 short chain dehydroge 97.5 0.0017 3.7E-08 68.5 14.2 106 47-156 1-118 (657)
135 PRK14618 NAD(P)H-dependent gly 97.5 0.0011 2.3E-08 64.3 11.2 97 46-167 4-108 (328)
136 PRK08643 acetoin reductase; Va 97.5 0.0055 1.2E-07 56.5 15.5 156 47-220 3-181 (256)
137 PRK07417 arogenate dehydrogena 97.4 0.001 2.2E-08 63.0 10.6 64 47-122 1-65 (279)
138 TIGR01214 rmlD dTDP-4-dehydror 97.4 0.00063 1.4E-08 63.9 9.1 95 48-163 1-99 (287)
139 KOG1429 dTDP-glucose 4-6-dehyd 97.4 0.00032 7E-09 65.7 6.8 112 45-162 26-139 (350)
140 KOG1430 C-3 sterol dehydrogena 97.4 0.001 2.3E-08 65.0 10.5 118 45-166 3-127 (361)
141 PRK12384 sorbitol-6-phosphate 97.4 0.0063 1.4E-07 56.2 15.0 118 47-166 3-143 (259)
142 PRK07102 short chain dehydroge 97.4 0.0081 1.8E-07 54.9 15.6 116 47-165 2-136 (243)
143 COG0300 DltE Short-chain dehyd 97.4 0.0036 7.8E-08 58.8 13.2 163 42-221 2-186 (265)
144 PF01370 Epimerase: NAD depend 97.4 0.00089 1.9E-08 60.6 9.0 168 49-222 1-174 (236)
145 PLN02686 cinnamoyl-CoA reducta 97.4 0.0012 2.6E-08 65.0 10.6 178 42-222 49-250 (367)
146 PRK12429 3-hydroxybutyrate deh 97.4 0.0043 9.4E-08 56.9 13.7 115 45-164 3-140 (258)
147 PRK07231 fabG 3-ketoacyl-(acyl 97.4 0.0062 1.4E-07 55.6 14.6 36 45-82 4-39 (251)
148 PRK05717 oxidoreductase; Valid 97.4 0.0022 4.7E-08 59.3 11.6 155 46-220 10-185 (255)
149 PRK14982 acyl-ACP reductase; P 97.4 0.0015 3.4E-08 63.5 10.7 100 43-170 152-253 (340)
150 PRK06914 short chain dehydroge 97.3 0.0082 1.8E-07 56.1 15.4 158 46-220 3-182 (280)
151 PRK07523 gluconate 5-dehydroge 97.3 0.0047 1E-07 57.0 13.5 157 45-219 9-187 (255)
152 PRK08340 glucose-1-dehydrogena 97.3 0.0046 9.9E-08 57.3 13.4 152 47-217 1-177 (259)
153 PRK06172 short chain dehydroge 97.3 0.0045 9.8E-08 56.9 13.2 156 46-220 7-186 (253)
154 PRK06182 short chain dehydroge 97.3 0.0055 1.2E-07 57.2 13.9 114 45-164 2-133 (273)
155 PRK06482 short chain dehydroge 97.3 0.0041 8.9E-08 58.1 13.0 154 47-219 3-176 (276)
156 PRK06180 short chain dehydroge 97.3 0.0046 9.9E-08 58.0 13.4 145 46-207 4-168 (277)
157 PRK12320 hypothetical protein; 97.3 0.0019 4.2E-08 68.5 11.8 101 47-163 1-101 (699)
158 PRK07326 short chain dehydroge 97.3 0.0052 1.1E-07 55.8 13.1 115 46-165 6-141 (237)
159 PRK07502 cyclohexadienyl dehyd 97.3 0.0019 4.1E-08 62.0 10.5 68 47-122 7-74 (307)
160 PRK05875 short chain dehydroge 97.3 0.007 1.5E-07 56.5 14.1 161 44-220 5-188 (276)
161 PRK08278 short chain dehydroge 97.3 0.01 2.3E-07 55.6 15.3 160 45-220 5-193 (273)
162 PRK08655 prephenate dehydrogen 97.3 0.0024 5.2E-08 64.5 11.6 66 47-122 1-66 (437)
163 PRK12827 short chain dehydroge 97.3 0.0095 2.1E-07 54.3 14.7 118 45-166 5-149 (249)
164 PLN02657 3,8-divinyl protochlo 97.3 0.0036 7.8E-08 62.2 12.7 114 44-163 58-181 (390)
165 PRK05876 short chain dehydroge 97.3 0.0057 1.2E-07 57.5 13.4 116 45-164 5-143 (275)
166 PRK07985 oxidoreductase; Provi 97.3 0.017 3.8E-07 54.8 16.8 158 44-219 47-227 (294)
167 TIGR02197 heptose_epim ADP-L-g 97.3 0.0022 4.7E-08 60.9 10.6 110 49-164 1-114 (314)
168 PRK08265 short chain dehydroge 97.3 0.0056 1.2E-07 56.9 13.2 155 45-220 5-179 (261)
169 PRK07067 sorbitol dehydrogenas 97.3 0.005 1.1E-07 56.8 12.8 152 47-216 7-178 (257)
170 PRK05865 hypothetical protein; 97.3 0.0023 5E-08 69.4 11.8 104 47-166 1-105 (854)
171 PRK10538 malonic semialdehyde 97.3 0.004 8.7E-08 57.3 11.9 154 47-220 1-176 (248)
172 PRK08213 gluconate 5-dehydroge 97.3 0.011 2.4E-07 54.6 14.9 119 43-165 9-150 (259)
173 TIGR03206 benzo_BadH 2-hydroxy 97.2 0.0072 1.6E-07 55.2 13.4 116 45-164 2-139 (250)
174 PRK07814 short chain dehydroge 97.2 0.0078 1.7E-07 55.9 13.8 158 44-220 8-188 (263)
175 PRK07634 pyrroline-5-carboxyla 97.2 0.0041 8.9E-08 57.4 11.8 71 44-122 2-74 (245)
176 TIGR01832 kduD 2-deoxy-D-gluco 97.2 0.013 2.9E-07 53.5 15.2 158 45-220 4-182 (248)
177 PRK07666 fabG 3-ketoacyl-(acyl 97.2 0.0085 1.8E-07 54.6 13.8 118 45-166 6-145 (239)
178 PRK12937 short chain dehydroge 97.2 0.0061 1.3E-07 55.6 12.8 156 46-219 5-181 (245)
179 PRK06924 short chain dehydroge 97.2 0.0032 6.9E-08 57.8 10.8 34 47-82 2-35 (251)
180 PRK07680 late competence prote 97.2 0.002 4.3E-08 60.8 9.6 97 47-167 1-100 (273)
181 PRK07069 short chain dehydroge 97.2 0.016 3.5E-07 52.9 15.5 146 48-208 1-170 (251)
182 COG1088 RfbB dTDP-D-glucose 4, 97.2 0.004 8.6E-08 59.0 11.2 167 47-213 1-176 (340)
183 PRK12936 3-ketoacyl-(acyl-carr 97.2 0.0038 8.2E-08 56.9 11.0 156 45-219 5-180 (245)
184 PRK07856 short chain dehydroge 97.2 0.0059 1.3E-07 56.3 12.3 142 45-208 5-167 (252)
185 PF01118 Semialdhyde_dh: Semia 97.2 0.0011 2.3E-08 54.9 6.5 72 48-122 1-74 (121)
186 PRK09135 pteridine reductase; 97.2 0.0084 1.8E-07 54.6 13.2 147 47-208 7-175 (249)
187 PLN02688 pyrroline-5-carboxyla 97.2 0.003 6.6E-08 59.1 10.4 66 47-122 1-69 (266)
188 TIGR01179 galE UDP-glucose-4-e 97.1 0.004 8.7E-08 59.1 11.0 110 48-163 1-120 (328)
189 PRK08945 putative oxoacyl-(acy 97.1 0.014 3.1E-07 53.5 14.3 120 43-164 9-152 (247)
190 PRK05866 short chain dehydroge 97.1 0.017 3.6E-07 55.0 15.2 157 44-218 38-219 (293)
191 PRK07806 short chain dehydroge 97.1 0.0038 8.1E-08 57.2 10.4 116 45-164 5-135 (248)
192 PRK07576 short chain dehydroge 97.1 0.0068 1.5E-07 56.5 12.2 147 46-208 9-176 (264)
193 PRK11880 pyrroline-5-carboxyla 97.1 0.0034 7.3E-08 58.8 10.1 96 46-167 2-98 (267)
194 PRK07063 short chain dehydroge 97.1 0.026 5.7E-07 52.1 16.1 159 45-220 6-187 (260)
195 PRK07424 bifunctional sterol d 97.1 0.0097 2.1E-07 59.5 13.8 131 18-152 151-290 (406)
196 PRK12939 short chain dehydroge 97.1 0.013 2.8E-07 53.4 13.8 117 44-164 5-143 (250)
197 PRK12481 2-deoxy-D-gluconate 3 97.1 0.0097 2.1E-07 55.0 13.0 157 45-219 7-184 (251)
198 PRK12828 short chain dehydroge 97.1 0.0058 1.3E-07 55.2 11.3 116 45-164 6-141 (239)
199 PRK07832 short chain dehydroge 97.1 0.029 6.2E-07 52.4 16.3 155 47-218 1-178 (272)
200 TIGR02354 thiF_fam2 thiamine b 97.1 0.0057 1.2E-07 55.2 10.9 35 45-81 20-54 (200)
201 PRK06128 oxidoreductase; Provi 97.1 0.015 3.2E-07 55.3 14.5 156 45-218 54-232 (300)
202 PRK07890 short chain dehydroge 97.1 0.015 3.3E-07 53.4 14.2 118 43-164 2-141 (258)
203 PF10727 Rossmann-like: Rossma 97.1 0.00068 1.5E-08 56.7 4.4 102 45-172 9-115 (127)
204 PRK06841 short chain dehydroge 97.1 0.0061 1.3E-07 56.0 11.3 114 45-164 14-148 (255)
205 PRK12746 short chain dehydroge 97.1 0.023 4.9E-07 52.2 15.0 157 45-219 5-188 (254)
206 PRK05993 short chain dehydroge 97.1 0.0079 1.7E-07 56.5 12.1 112 47-164 5-135 (277)
207 PRK06701 short chain dehydroge 97.1 0.015 3.2E-07 55.2 14.0 120 42-165 42-183 (290)
208 PRK06545 prephenate dehydrogen 97.1 0.0035 7.5E-08 61.7 10.0 68 47-122 1-68 (359)
209 PRK06124 gluconate 5-dehydroge 97.1 0.0065 1.4E-07 56.0 11.3 117 45-166 10-149 (256)
210 PRK12745 3-ketoacyl-(acyl-carr 97.1 0.03 6.4E-07 51.4 15.6 34 47-82 3-36 (256)
211 PLN02256 arogenate dehydrogena 97.1 0.0059 1.3E-07 58.7 11.2 68 42-122 32-100 (304)
212 PRK05650 short chain dehydroge 97.1 0.016 3.6E-07 53.9 14.0 114 47-165 1-137 (270)
213 PRK08589 short chain dehydroge 97.1 0.014 3E-07 54.7 13.5 155 45-219 5-182 (272)
214 PLN02260 probable rhamnose bio 97.1 0.0076 1.7E-07 64.0 13.1 92 42-155 376-474 (668)
215 PRK07679 pyrroline-5-carboxyla 97.0 0.0073 1.6E-07 57.1 11.7 71 44-122 1-73 (279)
216 PRK06500 short chain dehydroge 97.0 0.011 2.4E-07 54.0 12.5 143 46-207 6-168 (249)
217 PRK11559 garR tartronate semia 97.0 0.0036 7.8E-08 59.6 9.6 64 47-122 3-66 (296)
218 PLN02996 fatty acyl-CoA reduct 97.0 0.01 2.3E-07 60.8 13.5 111 42-153 7-150 (491)
219 TIGR01830 3oxo_ACP_reduc 3-oxo 97.0 0.0097 2.1E-07 53.9 12.0 156 49-220 1-177 (239)
220 PRK07024 short chain dehydroge 97.0 0.0087 1.9E-07 55.3 11.8 152 47-218 3-178 (257)
221 PRK06179 short chain dehydroge 97.0 0.015 3.3E-07 54.0 13.4 111 47-165 5-133 (270)
222 PLN02712 arogenate dehydrogena 97.0 0.0059 1.3E-07 64.8 11.7 68 42-122 48-116 (667)
223 PRK06181 short chain dehydroge 97.0 0.011 2.3E-07 54.8 12.3 116 47-166 2-139 (263)
224 TIGR00872 gnd_rel 6-phosphoglu 97.0 0.006 1.3E-07 58.4 10.8 95 47-166 1-96 (298)
225 PLN00141 Tic62-NAD(P)-related 97.0 0.0051 1.1E-07 56.9 10.1 108 46-162 17-130 (251)
226 PRK07774 short chain dehydroge 97.0 0.024 5.2E-07 51.8 14.4 155 45-220 5-184 (250)
227 TIGR01505 tartro_sem_red 2-hyd 97.0 0.0036 7.7E-08 59.6 9.0 63 48-122 1-63 (291)
228 PF04321 RmlD_sub_bind: RmlD s 97.0 0.00083 1.8E-08 63.9 4.6 98 47-163 1-100 (286)
229 PRK05653 fabG 3-ketoacyl-(acyl 97.0 0.011 2.3E-07 53.6 11.9 36 45-82 4-39 (246)
230 PRK12549 shikimate 5-dehydroge 97.0 0.0032 6.9E-08 60.0 8.5 75 45-124 126-204 (284)
231 TIGR03325 BphB_TodD cis-2,3-di 97.0 0.0065 1.4E-07 56.4 10.3 36 45-82 4-39 (262)
232 PRK08263 short chain dehydroge 97.0 0.0096 2.1E-07 55.7 11.5 111 47-163 4-135 (275)
233 PRK12935 acetoacetyl-CoA reduc 96.9 0.029 6.2E-07 51.3 14.4 115 46-164 6-143 (247)
234 TIGR01963 PHB_DH 3-hydroxybuty 96.9 0.037 7.9E-07 50.6 15.1 34 47-82 2-35 (255)
235 PRK08085 gluconate 5-dehydroge 96.9 0.015 3.2E-07 53.6 12.5 115 46-164 9-145 (254)
236 TIGR01746 Thioester-redct thio 96.9 0.011 2.4E-07 56.9 12.0 114 48-163 1-135 (367)
237 PRK12480 D-lactate dehydrogena 96.9 0.0058 1.3E-07 59.5 10.0 93 44-165 144-236 (330)
238 PRK06138 short chain dehydroge 96.9 0.024 5.2E-07 51.9 13.7 145 45-207 4-171 (252)
239 PF11975 Glyco_hydro_4C: Famil 96.9 0.0043 9.3E-08 57.2 8.7 70 279-352 141-214 (232)
240 TIGR02632 RhaD_aldol-ADH rhamn 96.9 0.015 3.4E-07 61.9 14.0 151 44-208 412-585 (676)
241 PRK06398 aldose dehydrogenase; 96.9 0.017 3.8E-07 53.5 12.9 151 45-220 5-172 (258)
242 PRK12826 3-ketoacyl-(acyl-carr 96.9 0.012 2.5E-07 53.7 11.6 115 45-164 5-142 (251)
243 PRK05854 short chain dehydroge 96.9 0.016 3.4E-07 55.7 12.9 174 43-220 11-206 (313)
244 PRK11199 tyrA bifunctional cho 96.9 0.0057 1.2E-07 60.6 10.0 53 46-122 98-150 (374)
245 PRK08507 prephenate dehydrogen 96.9 0.0074 1.6E-07 57.0 10.4 66 47-122 1-66 (275)
246 PRK06198 short chain dehydroge 96.9 0.046 1E-06 50.3 15.6 149 44-208 4-176 (260)
247 PRK08269 3-hydroxybutyryl-CoA 96.9 0.0075 1.6E-07 58.3 10.6 111 58-192 1-137 (314)
248 PRK09291 short chain dehydroge 96.9 0.027 5.9E-07 51.7 14.0 76 47-126 3-85 (257)
249 PRK07825 short chain dehydroge 96.9 0.025 5.5E-07 52.6 13.9 116 45-166 4-139 (273)
250 PRK05557 fabG 3-ketoacyl-(acyl 96.9 0.038 8.3E-07 50.0 14.7 117 45-165 4-143 (248)
251 PRK06101 short chain dehydroge 96.9 0.02 4.4E-07 52.4 12.8 145 47-207 2-159 (240)
252 PRK06523 short chain dehydroge 96.9 0.003 6.4E-08 58.4 7.3 150 45-220 8-181 (260)
253 PRK06949 short chain dehydroge 96.9 0.015 3.3E-07 53.4 12.0 37 44-82 7-43 (258)
254 PRK05565 fabG 3-ketoacyl-(acyl 96.9 0.019 4E-07 52.3 12.4 115 46-164 5-142 (247)
255 PRK07060 short chain dehydroge 96.9 0.023 5E-07 51.7 13.1 148 44-207 7-168 (245)
256 PRK06928 pyrroline-5-carboxyla 96.9 0.0085 1.8E-07 56.8 10.4 100 46-168 1-103 (277)
257 PF01488 Shikimate_DH: Shikima 96.9 0.0046 9.9E-08 52.1 7.7 77 42-125 8-86 (135)
258 PRK12491 pyrroline-5-carboxyla 96.9 0.0077 1.7E-07 57.0 10.0 68 46-122 2-71 (272)
259 PRK07097 gluconate 5-dehydroge 96.8 0.021 4.5E-07 53.1 12.8 156 45-219 9-187 (265)
260 PRK12825 fabG 3-ketoacyl-(acyl 96.8 0.015 3.2E-07 52.8 11.4 115 44-163 4-142 (249)
261 PRK06935 2-deoxy-D-gluconate 3 96.8 0.019 4.1E-07 53.0 12.3 156 45-219 14-191 (258)
262 PRK08277 D-mannonate oxidoredu 96.8 0.034 7.4E-07 51.9 14.1 37 44-82 8-44 (278)
263 COG1090 Predicted nucleoside-d 96.8 0.0095 2.1E-07 55.9 10.0 102 49-161 1-107 (297)
264 PRK08642 fabG 3-ketoacyl-(acyl 96.8 0.019 4.1E-07 52.5 12.2 153 47-217 6-185 (253)
265 PRK07574 formate dehydrogenase 96.8 0.013 2.9E-07 58.1 11.6 113 32-169 177-292 (385)
266 PRK08993 2-deoxy-D-gluconate 3 96.8 0.037 8.1E-07 51.0 14.1 157 46-220 10-187 (253)
267 PRK08628 short chain dehydroge 96.8 0.034 7.3E-07 51.2 13.8 116 44-163 5-139 (258)
268 COG4221 Short-chain alcohol de 96.8 0.054 1.2E-06 50.0 14.6 157 47-220 7-182 (246)
269 PRK08251 short chain dehydroge 96.8 0.06 1.3E-06 49.2 15.3 115 47-164 3-140 (248)
270 PRK09072 short chain dehydroge 96.8 0.033 7.1E-07 51.6 13.6 116 45-165 4-140 (263)
271 PF02826 2-Hacid_dh_C: D-isome 96.8 0.013 2.7E-07 51.8 10.2 97 42-165 32-129 (178)
272 PLN02780 ketoreductase/ oxidor 96.8 0.022 4.7E-07 55.0 12.7 158 46-218 53-235 (320)
273 PRK08936 glucose-1-dehydrogena 96.8 0.098 2.1E-06 48.3 16.7 158 45-220 6-187 (261)
274 PRK12744 short chain dehydroge 96.8 0.059 1.3E-06 49.7 15.2 157 45-220 7-188 (257)
275 PTZ00142 6-phosphogluconate de 96.8 0.0077 1.7E-07 61.3 9.9 100 47-169 2-107 (470)
276 PRK08339 short chain dehydroge 96.8 0.1 2.2E-06 48.6 16.9 154 46-217 8-183 (263)
277 PRK12747 short chain dehydroge 96.8 0.056 1.2E-06 49.6 14.9 157 45-219 3-186 (252)
278 PRK07478 short chain dehydroge 96.8 0.044 9.5E-07 50.4 14.2 157 46-220 6-186 (254)
279 PRK07831 short chain dehydroge 96.8 0.098 2.1E-06 48.4 16.6 161 44-220 15-199 (262)
280 PRK08264 short chain dehydroge 96.8 0.017 3.6E-07 52.5 11.3 143 45-207 5-164 (238)
281 PRK08219 short chain dehydroge 96.8 0.013 2.9E-07 52.5 10.5 75 46-125 3-82 (227)
282 PRK07109 short chain dehydroge 96.8 0.042 9.1E-07 53.3 14.6 115 45-164 7-144 (334)
283 PF02558 ApbA: Ketopantoate re 96.8 0.0096 2.1E-07 50.6 9.0 118 49-193 1-125 (151)
284 PRK12742 oxidoreductase; Provi 96.8 0.018 4E-07 52.1 11.5 157 45-219 5-174 (237)
285 PRK09242 tropinone reductase; 96.8 0.052 1.1E-06 50.0 14.6 158 46-220 9-189 (257)
286 PRK06113 7-alpha-hydroxysteroi 96.8 0.029 6.2E-07 51.7 12.8 158 45-220 10-188 (255)
287 PRK12490 6-phosphogluconate de 96.7 0.0081 1.7E-07 57.5 9.3 64 47-122 1-67 (299)
288 PRK05855 short chain dehydroge 96.7 0.028 6.2E-07 57.8 14.1 160 42-219 311-493 (582)
289 PRK07035 short chain dehydroge 96.7 0.022 4.7E-07 52.3 11.9 157 45-219 7-186 (252)
290 PRK08220 2,3-dihydroxybenzoate 96.7 0.023 5E-07 52.0 12.0 37 44-82 6-42 (252)
291 PRK05693 short chain dehydroge 96.7 0.025 5.4E-07 52.8 12.4 34 47-82 2-35 (274)
292 COG1712 Predicted dinucleotide 96.7 0.016 3.6E-07 52.7 10.5 96 47-167 1-97 (255)
293 TIGR02415 23BDH acetoin reduct 96.7 0.046 1E-06 50.1 14.0 112 48-163 2-136 (254)
294 PRK08226 short chain dehydroge 96.7 0.046 9.9E-07 50.5 14.1 158 45-219 5-183 (263)
295 COG1893 ApbA Ketopantoate redu 96.7 0.0063 1.4E-07 58.6 8.4 120 47-194 1-126 (307)
296 COG2084 MmsB 3-hydroxyisobutyr 96.7 0.012 2.6E-07 56.0 10.1 65 47-122 1-65 (286)
297 COG1748 LYS9 Saccharopine dehy 96.7 0.0045 9.7E-08 61.2 7.4 75 46-123 1-77 (389)
298 PTZ00431 pyrroline carboxylate 96.7 0.011 2.5E-07 55.4 9.9 91 45-167 2-94 (260)
299 PRK08818 prephenate dehydrogen 96.7 0.015 3.3E-07 57.4 11.0 57 45-122 3-59 (370)
300 PRK12823 benD 1,6-dihydroxycyc 96.7 0.043 9.4E-07 50.6 13.6 155 44-219 6-183 (260)
301 PRK06197 short chain dehydroge 96.7 0.033 7.2E-07 53.0 13.2 172 44-220 14-207 (306)
302 PRK12367 short chain dehydroge 96.7 0.038 8.1E-07 51.3 13.1 99 47-149 15-117 (245)
303 PRK06077 fabG 3-ketoacyl-(acyl 96.7 0.053 1.1E-06 49.5 13.9 157 45-220 5-182 (252)
304 cd05213 NAD_bind_Glutamyl_tRNA 96.7 0.017 3.7E-07 55.7 10.9 103 44-170 176-280 (311)
305 COG1091 RfbD dTDP-4-dehydrorha 96.6 0.0096 2.1E-07 56.4 8.8 156 47-234 1-166 (281)
306 PRK08416 7-alpha-hydroxysteroi 96.6 0.13 2.7E-06 47.7 16.4 156 44-217 6-191 (260)
307 PRK07453 protochlorophyllide o 96.6 0.023 4.9E-07 54.6 11.7 115 45-163 5-144 (322)
308 PRK09186 flagellin modificatio 96.6 0.025 5.3E-07 52.0 11.4 36 45-82 3-38 (256)
309 PRK09009 C factor cell-cell si 96.6 0.1 2.2E-06 47.3 15.4 144 47-208 1-167 (235)
310 PRK09599 6-phosphogluconate de 96.6 0.011 2.3E-07 56.7 9.3 64 47-122 1-67 (301)
311 PLN03139 formate dehydrogenase 96.6 0.023 4.9E-07 56.5 11.7 101 43-168 196-298 (386)
312 PRK07023 short chain dehydroge 96.6 0.0089 1.9E-07 54.7 8.2 35 46-82 1-35 (243)
313 PRK08063 enoyl-(acyl carrier p 96.6 0.064 1.4E-06 49.0 14.0 146 46-207 4-172 (250)
314 PRK06550 fabG 3-ketoacyl-(acyl 96.6 0.034 7.4E-07 50.4 12.0 151 45-220 4-169 (235)
315 PRK06139 short chain dehydroge 96.6 0.06 1.3E-06 52.2 14.3 115 45-164 6-143 (330)
316 PRK08703 short chain dehydroge 96.6 0.16 3.4E-06 46.2 16.4 37 44-82 4-40 (239)
317 COG0569 TrkA K+ transport syst 96.6 0.0042 9E-08 57.1 5.9 33 47-82 1-33 (225)
318 PRK06114 short chain dehydroge 96.6 0.057 1.2E-06 49.8 13.6 35 46-82 8-42 (254)
319 PRK08324 short chain dehydroge 96.6 0.041 8.8E-07 58.8 14.1 115 45-164 421-558 (681)
320 PLN00016 RNA-binding protein; 96.6 0.026 5.6E-07 55.7 11.8 100 46-163 52-164 (378)
321 PRK13243 glyoxylate reductase; 96.6 0.016 3.4E-07 56.5 10.0 100 43-169 147-248 (333)
322 PRK15461 NADH-dependent gamma- 96.6 0.0076 1.6E-07 57.6 7.7 64 47-122 2-65 (296)
323 PRK06463 fabG 3-ketoacyl-(acyl 96.6 0.075 1.6E-06 48.9 14.2 157 46-220 7-181 (255)
324 COG2910 Putative NADH-flavin r 96.5 0.022 4.7E-07 50.5 9.7 103 47-163 1-104 (211)
325 PRK08177 short chain dehydroge 96.5 0.045 9.7E-07 49.5 12.4 34 47-82 2-35 (225)
326 PRK15469 ghrA bifunctional gly 96.5 0.034 7.3E-07 53.7 12.0 93 44-163 134-226 (312)
327 PRK05708 2-dehydropantoate 2-r 96.5 0.041 8.8E-07 52.9 12.6 115 46-191 2-125 (305)
328 PLN02725 GDP-4-keto-6-deoxyman 96.5 0.007 1.5E-07 57.2 7.2 150 50-222 1-164 (306)
329 TIGR02356 adenyl_thiF thiazole 96.5 0.021 4.6E-07 51.5 9.8 36 45-82 20-55 (202)
330 PRK07062 short chain dehydroge 96.5 0.12 2.5E-06 47.9 15.2 118 45-165 7-147 (265)
331 PF00899 ThiF: ThiF family; I 96.5 0.011 2.5E-07 49.5 7.5 35 46-82 2-36 (135)
332 PRK06947 glucose-1-dehydrogena 96.5 0.11 2.3E-06 47.5 14.6 155 47-219 3-185 (248)
333 cd01065 NAD_bind_Shikimate_DH 96.5 0.013 2.8E-07 49.9 8.0 74 44-125 17-92 (155)
334 KOG2305 3-hydroxyacyl-CoA dehy 96.5 0.0073 1.6E-07 55.0 6.5 104 47-169 4-124 (313)
335 PRK12743 oxidoreductase; Provi 96.5 0.13 2.7E-06 47.5 15.2 146 47-208 3-172 (256)
336 cd01078 NAD_bind_H4MPT_DH NADP 96.5 0.012 2.6E-07 52.5 8.0 76 45-123 27-106 (194)
337 PRK07074 short chain dehydroge 96.5 0.039 8.4E-07 50.8 11.7 143 47-208 3-167 (257)
338 PRK06476 pyrroline-5-carboxyla 96.5 0.016 3.4E-07 54.2 9.1 68 47-122 1-69 (258)
339 PF01113 DapB_N: Dihydrodipico 96.5 0.014 2.9E-07 48.5 7.7 72 47-122 1-75 (124)
340 PF03949 Malic_M: Malic enzyme 96.5 0.0091 2E-07 55.7 7.3 107 45-171 24-151 (255)
341 PRK05867 short chain dehydroge 96.5 0.056 1.2E-06 49.7 12.6 157 46-219 9-189 (253)
342 PRK06171 sorbitol-6-phosphate 96.5 0.0096 2.1E-07 55.2 7.6 36 45-82 8-43 (266)
343 COG0677 WecC UDP-N-acetyl-D-ma 96.4 0.058 1.2E-06 53.2 12.8 123 47-183 10-149 (436)
344 PRK06196 oxidoreductase; Provi 96.4 0.041 8.9E-07 52.7 11.9 115 44-164 24-156 (315)
345 cd05312 NAD_bind_1_malic_enz N 96.4 0.02 4.2E-07 54.2 9.3 101 46-167 25-144 (279)
346 PRK05479 ketol-acid reductoiso 96.4 0.024 5.2E-07 55.1 10.1 67 44-122 15-81 (330)
347 PRK05884 short chain dehydroge 96.4 0.018 3.9E-07 52.3 8.9 34 47-82 1-34 (223)
348 PRK06057 short chain dehydroge 96.4 0.022 4.7E-07 52.5 9.6 36 45-82 6-41 (255)
349 TIGR02685 pter_reduc_Leis pter 96.4 0.095 2.1E-06 48.7 13.9 32 48-81 3-34 (267)
350 PRK06200 2,3-dihydroxy-2,3-dih 96.4 0.029 6.3E-07 51.9 10.3 36 45-82 5-40 (263)
351 COG0287 TyrA Prephenate dehydr 96.4 0.019 4.1E-07 54.5 9.1 68 46-122 3-72 (279)
352 PRK07792 fabG 3-ketoacyl-(acyl 96.4 0.05 1.1E-06 52.0 12.2 79 44-126 10-101 (306)
353 PRK13304 L-aspartate dehydroge 96.4 0.029 6.3E-07 52.8 10.3 69 46-123 1-70 (265)
354 PRK06123 short chain dehydroge 96.3 0.16 3.6E-06 46.2 14.9 156 48-219 4-185 (248)
355 KOG1205 Predicted dehydrogenas 96.3 0.13 2.7E-06 48.9 14.1 120 46-169 12-155 (282)
356 PRK15059 tartronate semialdehy 96.3 0.017 3.6E-07 55.3 8.4 63 47-122 1-63 (292)
357 COG0345 ProC Pyrroline-5-carbo 96.3 0.033 7.2E-07 52.4 9.9 96 46-166 1-98 (266)
358 PRK05599 hypothetical protein; 96.3 0.25 5.5E-06 45.4 15.8 153 47-217 1-176 (246)
359 PRK07201 short chain dehydroge 96.2 0.075 1.6E-06 56.1 13.8 118 42-164 367-509 (657)
360 KOG1371 UDP-glucose 4-epimeras 96.2 0.047 1E-06 52.4 10.9 104 46-154 2-119 (343)
361 cd01487 E1_ThiF_like E1_ThiF_l 96.2 0.056 1.2E-06 47.6 10.8 33 48-82 1-33 (174)
362 TIGR01831 fabG_rel 3-oxoacyl-( 96.2 0.05 1.1E-06 49.4 10.9 114 49-166 1-138 (239)
363 PRK12938 acetyacetyl-CoA reduc 96.2 0.13 2.8E-06 46.9 13.7 114 46-164 3-140 (246)
364 TIGR02853 spore_dpaA dipicolin 96.2 0.023 4.9E-07 54.3 8.7 97 45-169 150-247 (287)
365 PRK07577 short chain dehydroge 96.2 0.056 1.2E-06 48.9 11.1 35 46-82 3-37 (234)
366 PRK14806 bifunctional cyclohex 96.2 0.037 8E-07 59.5 11.4 67 47-122 4-71 (735)
367 PRK07454 short chain dehydroge 96.2 0.062 1.3E-06 48.9 11.4 35 46-82 6-40 (241)
368 PRK05476 S-adenosyl-L-homocyst 96.2 0.049 1.1E-06 54.8 11.4 132 5-166 156-302 (425)
369 PRK08644 thiamine biosynthesis 96.2 0.046 9.9E-07 49.8 10.4 36 45-82 27-62 (212)
370 PLN02712 arogenate dehydrogena 96.2 0.039 8.6E-07 58.6 11.2 68 42-122 365-433 (667)
371 PRK07984 enoyl-(acyl carrier p 96.2 0.11 2.4E-06 48.5 13.1 160 45-220 5-188 (262)
372 TIGR00873 gnd 6-phosphoglucona 96.2 0.022 4.8E-07 58.0 8.9 102 48-169 1-106 (467)
373 PRK07904 short chain dehydroge 96.2 0.11 2.3E-06 48.2 12.8 116 45-164 7-146 (253)
374 TIGR03649 ergot_EASG ergot alk 96.1 0.024 5.3E-07 53.2 8.6 33 48-82 1-33 (285)
375 cd05311 NAD_bind_2_malic_enz N 96.1 0.054 1.2E-06 49.8 10.6 100 45-168 24-133 (226)
376 PLN02494 adenosylhomocysteinas 96.1 0.06 1.3E-06 54.6 11.7 133 4-167 197-345 (477)
377 PF05368 NmrA: NmrA-like famil 96.1 0.021 4.6E-07 52.0 7.9 93 49-154 1-94 (233)
378 PRK09134 short chain dehydroge 96.1 0.072 1.6E-06 49.1 11.4 113 47-163 10-145 (258)
379 cd00762 NAD_bind_malic_enz NAD 96.1 0.0045 9.8E-08 57.7 3.2 121 46-191 25-166 (254)
380 cd01483 E1_enzyme_family Super 96.1 0.062 1.3E-06 45.4 9.9 33 48-82 1-33 (143)
381 cd00401 AdoHcyase S-adenosyl-L 96.1 0.089 1.9E-06 52.7 12.4 131 4-165 145-291 (413)
382 PRK08605 D-lactate dehydrogena 96.1 0.034 7.3E-07 54.2 9.3 65 44-122 144-208 (332)
383 TIGR00936 ahcY adenosylhomocys 96.1 0.076 1.6E-06 53.1 11.9 132 4-165 138-284 (406)
384 PRK12824 acetoacetyl-CoA reduc 96.1 0.16 3.6E-06 46.0 13.4 114 48-165 4-140 (245)
385 PRK07677 short chain dehydroge 96.1 0.22 4.7E-06 45.8 14.3 146 47-208 2-170 (252)
386 PLN02928 oxidoreductase family 96.0 0.036 7.7E-07 54.4 9.4 104 44-163 157-262 (347)
387 PRK12475 thiamine/molybdopteri 96.0 0.03 6.4E-07 54.7 8.7 76 45-122 23-124 (338)
388 PRK08217 fabG 3-ketoacyl-(acyl 96.0 0.069 1.5E-06 48.6 10.8 36 45-82 4-39 (253)
389 PRK13302 putative L-aspartate 96.0 0.023 4.9E-07 53.8 7.6 71 44-123 4-76 (271)
390 PRK14194 bifunctional 5,10-met 96.0 0.042 9.1E-07 52.6 9.4 57 44-125 157-213 (301)
391 KOG2666 UDP-glucose/GDP-mannos 96.0 0.027 6E-07 53.7 8.0 77 46-127 1-91 (481)
392 PRK07775 short chain dehydroge 96.0 0.18 4E-06 47.1 13.8 34 47-82 11-44 (274)
393 PLN02503 fatty acyl-CoA reduct 96.0 0.095 2.1E-06 55.1 12.8 112 42-154 115-258 (605)
394 PRK05872 short chain dehydroge 96.0 0.28 6.1E-06 46.5 15.2 115 45-164 8-143 (296)
395 PRK06483 dihydromonapterin red 96.0 0.14 3E-06 46.5 12.5 146 47-208 3-167 (236)
396 PRK07688 thiamine/molybdopteri 96.0 0.057 1.2E-06 52.8 10.4 36 45-82 23-58 (339)
397 PF03435 Saccharop_dh: Sacchar 95.9 0.008 1.7E-07 59.5 4.3 73 49-124 1-77 (386)
398 PRK06079 enoyl-(acyl carrier p 95.9 0.075 1.6E-06 49.1 10.6 35 46-82 7-43 (252)
399 PRK07578 short chain dehydroge 95.9 0.059 1.3E-06 47.7 9.6 101 47-163 1-111 (199)
400 TIGR01829 AcAcCoA_reduct aceto 95.9 0.22 4.7E-06 45.1 13.4 31 48-80 2-32 (242)
401 PLN02350 phosphogluconate dehy 95.9 0.035 7.6E-07 56.8 8.8 100 44-166 4-110 (493)
402 PRK08862 short chain dehydroge 95.9 0.65 1.4E-05 42.3 16.5 180 45-255 4-208 (227)
403 TIGR00465 ilvC ketol-acid redu 95.9 0.061 1.3E-06 52.0 10.0 66 45-122 2-67 (314)
404 PRK08261 fabG 3-ketoacyl-(acyl 95.9 0.1 2.2E-06 52.6 12.2 118 45-164 209-343 (450)
405 TIGR01850 argC N-acetyl-gamma- 95.8 0.062 1.3E-06 52.7 10.1 74 47-123 1-77 (346)
406 PRK06953 short chain dehydroge 95.8 0.12 2.5E-06 46.6 11.3 114 47-165 2-131 (222)
407 PRK05786 fabG 3-ketoacyl-(acyl 95.8 0.084 1.8E-06 47.8 10.4 34 47-82 6-39 (238)
408 TIGR01745 asd_gamma aspartate- 95.8 0.041 8.9E-07 54.1 8.7 71 47-123 1-73 (366)
409 PRK08017 oxidoreductase; Provi 95.8 0.19 4.2E-06 46.0 12.8 33 48-82 4-36 (256)
410 KOG1201 Hydroxysteroid 17-beta 95.8 0.45 9.8E-06 45.3 15.2 126 40-168 32-177 (300)
411 PRK08306 dipicolinate synthase 95.8 0.053 1.2E-06 51.9 9.2 68 44-122 150-218 (296)
412 PRK08223 hypothetical protein; 95.8 0.05 1.1E-06 51.8 8.7 35 46-82 27-61 (287)
413 COG1052 LdhA Lactate dehydroge 95.8 0.13 2.9E-06 49.9 11.8 94 43-163 143-236 (324)
414 PRK06484 short chain dehydroge 95.8 0.091 2E-06 53.8 11.4 35 46-82 5-39 (520)
415 PRK06484 short chain dehydroge 95.7 0.069 1.5E-06 54.7 10.5 156 46-219 269-442 (520)
416 TIGR01035 hemA glutamyl-tRNA r 95.7 0.045 9.7E-07 55.0 8.7 107 43-170 177-284 (417)
417 PRK05690 molybdopterin biosynt 95.7 0.094 2E-06 48.8 10.3 35 46-82 32-66 (245)
418 TIGR02355 moeB molybdopterin s 95.7 0.086 1.9E-06 49.0 9.9 35 46-82 24-58 (240)
419 PTZ00075 Adenosylhomocysteinas 95.7 0.075 1.6E-06 53.9 10.0 91 44-165 252-343 (476)
420 TIGR02371 ala_DH_arch alanine 95.7 0.056 1.2E-06 52.5 8.9 71 46-122 128-200 (325)
421 PRK14106 murD UDP-N-acetylmura 95.6 0.04 8.6E-07 55.6 8.1 124 45-179 4-132 (450)
422 PRK09496 trkA potassium transp 95.6 0.059 1.3E-06 54.3 9.2 71 47-122 1-73 (453)
423 PRK14874 aspartate-semialdehyd 95.6 0.039 8.4E-07 53.8 7.6 71 46-123 1-72 (334)
424 PRK06125 short chain dehydroge 95.6 0.65 1.4E-05 42.7 15.6 116 45-164 6-140 (259)
425 PRK06505 enoyl-(acyl carrier p 95.6 0.58 1.3E-05 43.8 15.3 154 46-219 7-187 (271)
426 cd00757 ThiF_MoeB_HesA_family 95.6 0.062 1.4E-06 49.3 8.4 36 45-82 20-55 (228)
427 PRK06598 aspartate-semialdehyd 95.6 0.077 1.7E-06 52.3 9.4 72 46-123 1-74 (369)
428 cd01485 E1-1_like Ubiquitin ac 95.6 0.12 2.7E-06 46.4 10.1 35 46-82 19-53 (198)
429 PRK08291 ectoine utilization p 95.6 0.079 1.7E-06 51.5 9.5 73 46-123 132-206 (330)
430 TIGR01724 hmd_rel H2-forming N 95.5 0.14 3E-06 49.4 10.7 66 47-122 1-89 (341)
431 PRK03659 glutathione-regulated 95.5 0.072 1.6E-06 56.1 9.8 138 46-215 400-542 (601)
432 TIGR00518 alaDH alanine dehydr 95.5 0.055 1.2E-06 53.5 8.4 82 38-125 159-241 (370)
433 COG0136 Asd Aspartate-semialde 95.5 0.06 1.3E-06 52.1 8.2 73 46-123 1-75 (334)
434 PRK06603 enoyl-(acyl carrier p 95.5 0.85 1.8E-05 42.3 15.9 159 45-219 7-188 (260)
435 PRK08618 ornithine cyclodeamin 95.5 0.07 1.5E-06 51.8 8.9 73 46-123 127-201 (325)
436 PRK05600 thiamine biosynthesis 95.5 0.047 1E-06 54.0 7.7 35 46-82 41-75 (370)
437 PRK05671 aspartate-semialdehyd 95.5 0.039 8.4E-07 53.8 7.0 72 45-123 3-75 (336)
438 PRK08415 enoyl-(acyl carrier p 95.4 0.66 1.4E-05 43.6 15.2 154 46-219 5-185 (274)
439 PF02423 OCD_Mu_crystall: Orni 95.4 0.054 1.2E-06 52.3 7.8 70 47-122 129-200 (313)
440 TIGR01500 sepiapter_red sepiap 95.4 0.25 5.4E-06 45.5 12.0 156 48-219 2-192 (256)
441 PRK06718 precorrin-2 dehydroge 95.4 0.24 5.2E-06 44.7 11.4 72 44-123 8-79 (202)
442 PRK06940 short chain dehydroge 95.4 0.18 3.9E-06 47.3 11.0 112 48-166 4-128 (275)
443 cd01080 NAD_bind_m-THF_DH_Cycl 95.4 0.066 1.4E-06 47.0 7.5 57 43-125 41-98 (168)
444 PRK07533 enoyl-(acyl carrier p 95.3 0.36 7.7E-06 44.7 12.8 160 45-220 9-191 (258)
445 PRK07340 ornithine cyclodeamin 95.3 0.08 1.7E-06 50.9 8.5 72 45-123 124-197 (304)
446 PRK08690 enoyl-(acyl carrier p 95.3 1.4 3.1E-05 40.8 16.8 158 45-220 5-189 (261)
447 PRK00048 dihydrodipicolinate r 95.3 0.044 9.6E-07 51.3 6.6 68 46-122 1-68 (257)
448 PF07991 IlvN: Acetohydroxy ac 95.3 0.089 1.9E-06 45.8 7.8 66 45-122 3-68 (165)
449 PLN02383 aspartate semialdehyd 95.3 0.045 9.8E-07 53.5 6.8 71 46-123 7-78 (344)
450 PRK00045 hemA glutamyl-tRNA re 95.3 0.087 1.9E-06 53.0 9.0 107 44-170 180-287 (423)
451 PRK08159 enoyl-(acyl carrier p 95.2 0.45 9.8E-06 44.6 13.3 160 44-219 8-190 (272)
452 PRK08303 short chain dehydroge 95.2 0.51 1.1E-05 45.2 13.9 160 45-220 7-204 (305)
453 PRK06407 ornithine cyclodeamin 95.2 0.087 1.9E-06 50.6 8.5 72 46-122 117-190 (301)
454 TIGR01327 PGDH D-3-phosphoglyc 95.2 0.075 1.6E-06 55.0 8.6 66 44-122 136-201 (525)
455 TIGR01692 HIBADH 3-hydroxyisob 95.2 0.072 1.6E-06 50.6 7.9 60 51-122 1-60 (288)
456 PRK08594 enoyl-(acyl carrier p 95.2 1.2 2.5E-05 41.3 15.9 158 46-219 7-189 (257)
457 PRK06141 ornithine cyclodeamin 95.2 0.11 2.4E-06 50.2 9.1 71 46-122 125-197 (314)
458 cd01492 Aos1_SUMO Ubiquitin ac 95.1 0.22 4.8E-06 44.8 10.3 36 45-82 20-55 (197)
459 TIGR01470 cysG_Nterm siroheme 95.1 0.25 5.5E-06 44.7 10.7 71 46-124 9-79 (205)
460 PLN02968 Probable N-acetyl-gam 95.1 0.075 1.6E-06 52.8 7.7 76 45-123 37-113 (381)
461 PRK06436 glycerate dehydrogena 95.0 0.14 3.1E-06 49.2 9.4 97 44-170 120-218 (303)
462 PRK06901 aspartate-semialdehyd 95.0 0.05 1.1E-06 52.4 6.1 70 45-123 2-73 (322)
463 PRK13581 D-3-phosphoglycerate 95.0 0.095 2.1E-06 54.3 8.6 66 44-123 138-203 (526)
464 PRK06728 aspartate-semialdehyd 95.0 0.053 1.2E-06 53.0 6.4 71 46-123 5-77 (347)
465 PRK07791 short chain dehydroge 95.0 0.71 1.5E-05 43.5 14.0 34 46-81 6-39 (286)
466 COG0111 SerA Phosphoglycerate 95.0 0.12 2.5E-06 50.3 8.7 80 29-122 126-205 (324)
467 COG1064 AdhP Zn-dependent alco 94.9 0.61 1.3E-05 45.5 13.3 126 46-204 167-300 (339)
468 KOG2711 Glycerol-3-phosphate d 94.9 0.39 8.5E-06 46.5 11.7 100 43-162 18-138 (372)
469 PRK07877 hypothetical protein; 94.9 0.13 2.9E-06 55.0 9.4 75 46-122 107-204 (722)
470 TIGR02992 ectoine_eutC ectoine 94.9 0.15 3.3E-06 49.4 9.2 73 46-123 129-203 (326)
471 PF07993 NAD_binding_4: Male s 94.9 0.16 3.5E-06 47.0 9.0 112 51-164 1-135 (249)
472 COG0002 ArgC Acetylglutamate s 94.9 0.07 1.5E-06 51.7 6.6 73 46-121 2-77 (349)
473 PRK08040 putative semialdehyde 94.8 0.064 1.4E-06 52.3 6.3 72 45-123 3-75 (336)
474 PRK06719 precorrin-2 dehydroge 94.8 0.35 7.5E-06 41.9 10.3 67 45-122 12-78 (157)
475 PRK07041 short chain dehydroge 94.8 0.21 4.5E-06 45.0 9.4 108 50-163 1-123 (230)
476 PRK07589 ornithine cyclodeamin 94.8 0.15 3.2E-06 50.0 8.7 71 46-122 129-201 (346)
477 COG0702 Predicted nucleoside-d 94.8 0.079 1.7E-06 48.9 6.7 74 47-125 1-74 (275)
478 PF13241 NAD_binding_7: Putati 94.8 0.22 4.7E-06 39.8 8.3 64 45-123 6-69 (103)
479 PRK15438 erythronate-4-phospha 94.7 0.15 3.4E-06 50.4 8.9 62 44-122 114-175 (378)
480 PRK09424 pntA NAD(P) transhydr 94.7 0.17 3.8E-06 52.0 9.4 151 38-208 157-328 (509)
481 PLN02306 hydroxypyruvate reduc 94.7 0.25 5.4E-06 49.2 10.2 103 44-163 163-272 (386)
482 PRK03562 glutathione-regulated 94.7 0.16 3.4E-06 53.7 9.3 137 46-214 400-541 (621)
483 PF02882 THF_DHG_CYH_C: Tetrah 94.6 0.19 4.2E-06 43.7 8.2 57 44-125 34-90 (160)
484 PRK08762 molybdopterin biosynt 94.6 0.17 3.7E-06 50.0 8.9 34 46-81 135-168 (376)
485 PRK00257 erythronate-4-phospha 94.6 0.15 3.3E-06 50.6 8.4 61 45-122 115-175 (381)
486 PRK05597 molybdopterin biosynt 94.6 0.18 3.9E-06 49.6 8.8 35 46-82 28-62 (355)
487 PRK15409 bifunctional glyoxyla 94.5 0.24 5.2E-06 48.1 9.6 94 43-163 142-236 (323)
488 PRK15116 sulfur acceptor prote 94.5 0.45 9.8E-06 44.9 11.1 35 46-82 30-64 (268)
489 cd01491 Ube1_repeat1 Ubiquitin 94.5 0.32 6.9E-06 46.4 10.1 75 45-122 18-113 (286)
490 PRK07878 molybdopterin biosynt 94.5 0.27 5.8E-06 49.0 10.1 35 46-82 42-76 (392)
491 PRK06823 ornithine cyclodeamin 94.5 0.24 5.1E-06 47.9 9.4 71 46-122 128-200 (315)
492 PRK14192 bifunctional 5,10-met 94.5 0.13 2.9E-06 48.9 7.5 57 44-125 157-213 (283)
493 PLN00203 glutamyl-tRNA reducta 94.4 0.38 8.1E-06 49.7 11.2 122 44-191 264-389 (519)
494 TIGR01809 Shik-DH-AROM shikima 94.4 0.12 2.6E-06 49.1 7.1 74 45-123 124-199 (282)
495 PRK07370 enoyl-(acyl carrier p 94.4 0.64 1.4E-05 43.1 11.9 156 46-220 6-190 (258)
496 PRK00436 argC N-acetyl-gamma-g 94.4 0.13 2.8E-06 50.3 7.5 33 46-79 2-35 (343)
497 PRK13301 putative L-aspartate 94.4 0.53 1.2E-05 44.3 11.0 95 46-167 2-99 (267)
498 PRK13529 malate dehydrogenase; 94.3 0.3 6.4E-06 50.5 10.0 105 46-167 295-421 (563)
499 PRK13940 glutamyl-tRNA reducta 94.3 0.16 3.6E-06 50.9 8.1 75 44-125 179-253 (414)
500 smart00859 Semialdhyde_dh Semi 94.3 0.39 8.5E-06 39.2 9.1 72 48-123 1-74 (122)
No 1
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=5.7e-69 Score=512.61 Aligned_cols=309 Identities=68% Similarity=1.080 Sum_probs=281.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~ 126 (358)
|||+||||+|+||+++++.|+.+++++||+|+|++.++|+++||+|+..+..++.+.+++|++++++|||+||++||.||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~ 80 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR 80 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence 69999998899999999999999999999999998778999999999744456653233566799999999999999999
Q ss_pred CCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEeeeccHHHHHHHHHHH
Q 018265 127 KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEV 206 (358)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~lds~R~~~~lA~~ 206 (358)
++||+|+|++..|+++++++++.|++++|++|+|++|||+|+||+++++++++++++|++||||+|.|||+|+++++|++
T Consensus 81 k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rviG~~~LDs~R~~~~la~~ 160 (310)
T cd01337 81 KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAEL 160 (310)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHEEeeechHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999889999999999999
Q ss_pred hCCCCCCCceEEEEec-CCCcccccccccCCCCCCChhHHHHHHHHHhcCcceeeecccCCCcccccHHHHHHHHHHHHH
Q 018265 207 LGLDPREVDVPVVGGH-AGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACL 285 (358)
Q Consensus 207 l~v~~~~v~~~v~G~h-g~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A~ai~~ii~ai~ 285 (358)
+|+++++|+++||||| |+ +++|+||++.+...++++++++|.++++++|++|++.|.|||+|+||+|.++++++++|+
T Consensus 161 l~v~~~~V~~~v~GeHsGd-s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~~a~a~~~iv~aIl 239 (310)
T cd01337 161 LGLDPAKVNVPVIGGHSGV-TILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSLL 239 (310)
T ss_pred hCcCHHHEEEEEEecCCCC-ceecccccccccccCCHHHHHHHHHHHHHHHHHHHhCccCCCCcchhHHHHHHHHHHHHH
Confidence 9999999999999999 78 999999999875456555689999999999999999866789999999999999999999
Q ss_pred ccCCCCCcEEEeeEEeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018265 286 RGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 356 (358)
Q Consensus 286 ~~~~~~~~v~~~s~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~ 356 (358)
+|+.+++.++++++++|+-.+++|+|+||++|++|+++++++++|+++|+++|++|++.|++.+++|+.|+
T Consensus 240 ~~~~~~~~~~~~s~~~~~g~~~v~~s~P~~ig~~Gv~~i~~l~~L~~~E~~~l~~S~~~i~~~~~~g~~~~ 310 (310)
T cd01337 240 RGLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELKKNIEKGVDFV 310 (310)
T ss_pred HhcCCCcceEEEEEEeccCCCceEEEEEEEEeCCeEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 88655556888887776535789999999999999999999525999999999999999999999999885
No 2
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=1.8e-68 Score=510.02 Aligned_cols=310 Identities=60% Similarity=0.963 Sum_probs=281.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRK 127 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~~ 127 (358)
||+||||+|+||+++++.|+.+++++||+|+|++++.|+++||+|......++.+.+.+|++++++|||+||+++|.|++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~~ 80 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPRK 80 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCCC
Confidence 79999988999999999999999999999999988889999999986433455432223456899999999999999999
Q ss_pred CCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEeeeccHHHHHHHHHHHh
Q 018265 128 PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVL 207 (358)
Q Consensus 128 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~lds~R~~~~lA~~l 207 (358)
+|++|++++..|++++++++++|++++|++++|++|||+|++++++++++++.+++|++||||+|.|||+||++++|+++
T Consensus 81 ~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~~rViG~g~LDsaR~r~~la~~l 160 (312)
T TIGR01772 81 PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELK 160 (312)
T ss_pred CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCChHHEEeeecchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888899999999999999998899999999999999
Q ss_pred CCCCCCCceEEEEecCCCcccccccccCCCCCCChhHHHHHHHHHhcCcceeeecccCCCcccccHHHHHHHHHHHHHcc
Q 018265 208 GLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRG 287 (358)
Q Consensus 208 ~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A~ai~~ii~ai~~~ 287 (358)
|+++++|+++||||||+++++|+||++++...++++++++|.++++++|++|++.|.|||+++||+|.++++++++|+++
T Consensus 161 ~v~~~~v~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~ia~a~~~iv~ail~~ 240 (312)
T TIGR01772 161 GKDPMEVNVPVIGGHSGETIIPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVRG 240 (312)
T ss_pred CCCHHHeEEEEEEecCCCccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCccCCCChhHHHHHHHHHHHHHHHHh
Confidence 99999999999999986689999999986434566668999999999999999986678999999999999999999975
Q ss_pred CCCCCcEEEeeEEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018265 288 LRGDAGVIECAYVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 357 (358)
Q Consensus 288 ~~~~~~v~~~s~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~ 357 (358)
..+++.++|+++++|+| .+++|||+||++|++|+++++++++|+++|+++|++|++.|++.+++|++|++
T Consensus 241 ~~d~~~v~~~s~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~g~~~~~ 311 (312)
T TIGR01772 241 LKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFEEKMLNGALPELKKNIKKGEEFVA 311 (312)
T ss_pred hCCCccEEEEEEEccCCCcCceEEEEEEEEcCCeeEEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 43344689988889998 78999999999999999999994389999999999999999999999999986
No 3
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=3.5e-67 Score=495.39 Aligned_cols=297 Identities=40% Similarity=0.608 Sum_probs=270.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTN--AVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+||+|||| |+||+++++.|+.+++..|++|+|+++ ++|.++||.|+.+. ...+.. .+.| +++++|||+||++|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~-~~~~-y~~~~~aDiVvitA 77 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKIT-GDGD-YEDLKGADIVVITA 77 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEe-cCCC-hhhhcCCCEEEEeC
Confidence 59999999 999999999998888888999999996 89999999999753 234433 2245 48899999999999
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHHH
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANT 201 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~~ 201 (358)
|.||||||+|+|++..|++|+++++++|.++|||++++++|||+|++||++ ++.+++|++||||+ |.||++||++
T Consensus 78 G~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~----~k~sg~p~~rvig~gt~LDsaR~~~ 153 (313)
T COG0039 78 GVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIA----MKFSGFPKNRVIGSGTVLDSARFRT 153 (313)
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHH----HHhcCCCccceecccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998765 78899999999999 8999999999
Q ss_pred HHHHHhCCCCCCCceEEEEecCCCcccccccccCCCC----C----CChhHHHHHHHHHhcCcceeeecccCCCcccccH
Q 018265 202 FVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----S----LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSM 273 (358)
Q Consensus 202 ~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----~----~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~ 273 (358)
++|+++|+++++|+++|+|+||+ ++||+||++++.+ + .+++++++|.++|+++|++|+++| |.| ++||+
T Consensus 154 ~lae~~~v~~~~V~~~ViGeHGd-t~vp~~S~a~v~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~k-G~~-t~~~~ 230 (313)
T COG0039 154 FLAEKLGVSPKDVHAYVIGEHGD-TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGP 230 (313)
T ss_pred HHHHHhCCChhHceeeEeccCCC-ceEEeeeeeeECCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHcc-Ccc-chhhH
Confidence 99999999999999999999999 9999999999853 1 233567899999999999999987 444 99999
Q ss_pred HHHHHHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018265 274 AYAAAKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 351 (358)
Q Consensus 274 A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~ 351 (358)
|.++++++++|++|++ +++|++ +++|+| ++++|+|+||++|++|+++++++ +|+++|+++|+.|++.||+.++.
T Consensus 231 A~a~a~~~~ail~d~~---~vl~~s~~l~G~yg~~dv~~gvP~~lg~~Gv~~iie~-~l~~~E~~~l~~s~~~lk~~i~~ 306 (313)
T COG0039 231 AAALARMVEAILRDEK---RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQEKLDKSAEELKKNIEL 306 (313)
T ss_pred HHHHHHHHHHHHcCCC---ceEEEEEeecCccCcCCeEEEeeEEEcCCCcEEEecC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999974 589997 789999 89999999999999999999996 99999999999999999999999
Q ss_pred hhhhhh
Q 018265 352 GVSFVR 357 (358)
Q Consensus 352 ~~~~~~ 357 (358)
+.+++.
T Consensus 307 ~~~~~~ 312 (313)
T COG0039 307 VKELVL 312 (313)
T ss_pred HHHhhc
Confidence 887764
No 4
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=2.7e-66 Score=496.80 Aligned_cols=317 Identities=77% Similarity=1.202 Sum_probs=288.6
Q ss_pred cccccCCCCCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC
Q 018265 34 GRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT 113 (358)
Q Consensus 34 ~~~~~~~~~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~ 113 (358)
+-+.||++++..+.||+||||+|+||+++++.|+.++++.||+|+|++++.|+++||.|+.....+..++.++|++++++
T Consensus 6 ~~~~~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~ 85 (323)
T PLN00106 6 SLRACRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALK 85 (323)
T ss_pred hhhccccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcC
Confidence 45799999999999999999989999999999999999999999999888899999999876445665445678889999
Q ss_pred CCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEeee
Q 018265 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTM 193 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~ 193 (358)
|||+||+++|.|+++|++|.+++..|+++++++++++++++|+++++++|||+|.+++++++++++.+++|++|+||+|.
T Consensus 86 ~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~ 165 (323)
T PLN00106 86 GADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTT 165 (323)
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEec
Confidence 99999999999999999999999999999999999999999999999999999976666677778999999999999988
Q ss_pred ccHHHHHHHHHHHhCCCCCCCceEEEEecCCCcccccccccCCCCCCChhHHHHHHHHHhcCcceeeecccCCCcccccH
Q 018265 194 LDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSM 273 (358)
Q Consensus 194 lds~R~~~~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~ 273 (358)
||++||++++|+++|+++.+|+++|+|+||++++||+||++.+...++++++++|.++++++|++|++.|.|||+++||+
T Consensus 166 LDs~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~~~ 245 (323)
T PLN00106 166 LDVVRANTFVAEKKGLDPADVDVPVVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGAGSATLSM 245 (323)
T ss_pred chHHHHHHHHHHHhCCChhheEEEEEEeCCCccEeeehhcceecccCCHHHHHHHHHHHHHHHHHHHhCccCCCCchHHH
Confidence 99999999999999999999999999999766899999999764446666789999999999999999755679999999
Q ss_pred HHHHHHHHHHHHccCCCCCcEEEeeEEeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018265 274 AYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQ 350 (358)
Q Consensus 274 A~ai~~ii~ai~~~~~~~~~v~~~s~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~ 350 (358)
|.++++++++|++|+++++.++||++++++|.+++|||+||+||++|+++++++++|+++|+++|++|++.|++.++
T Consensus 246 a~a~~~ii~ail~~~~~~~~v~~~s~~~~~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~ 322 (323)
T PLN00106 246 AYAAARFADACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLGLGPLSEYEQKGLEALKPELKASIE 322 (323)
T ss_pred HHHHHHHHHHHHhccCCCceEEEEEEECcccCCceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999998766667999998877764349999999999999999999549999999999999999998875
No 5
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=1e-63 Score=478.69 Aligned_cols=313 Identities=60% Similarity=0.968 Sum_probs=280.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
-++.||+||||+|+||+++++.|+..++.+||+|+|++.+.++++||.|+.....+..+....+++++++|||+||+++|
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG 85 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG 85 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence 35669999998899999999999988989999999996589999999998653344433221343689999999999999
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEeeeccHHHHHHHH
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFV 203 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~lds~R~~~~l 203 (358)
.|+++|++|.+++..|+++++++++++++++|+++|+++|||+|++++++.+.+++.+++|++||||++.|||+||++++
T Consensus 86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~l 165 (321)
T PTZ00325 86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFV 165 (321)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999886444568899999999999779999999999
Q ss_pred HHHhCCCCCCCceEEEEecCCCcccccccccCCCCCCChhHHHHHHHHHhcCcceeeecccCCCcccccHHHHHHHHHHH
Q 018265 204 AEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADA 283 (358)
Q Consensus 204 A~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A~ai~~ii~a 283 (358)
|+++|+++++|+++||||||++++||+||.+.. ++++++++++.++++++|++|++.|+|||+|+||+|.++++++++
T Consensus 166 a~~l~v~~~~V~~~VlGeHGd~s~v~~~S~~g~--~l~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~g~a~a~~~i~~a 243 (321)
T PTZ00325 166 AEALGMNPYDVNVPVVGGHSGVTIVPLLSQTGL--SLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTS 243 (321)
T ss_pred HHHhCcChhheEEEEEeecCCcccccchhccCC--CCCHHHHHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence 999999999999999999998459999999933 566777999999999999999998767799999999999999999
Q ss_pred HHccCCCCCcEEEeeEEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhC
Q 018265 284 CLRGLRGDAGVIECAYVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 358 (358)
Q Consensus 284 i~~~~~~~~~v~~~s~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 358 (358)
|++|..+++.++|+++++|+| .+++|+|+||++|++|+++++++++|+++|+++|++|++.|++.+++++.|+++
T Consensus 244 il~~~~~~~~v~~~~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~~~~~~~~ 319 (321)
T PTZ00325 244 VLKALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIGPLNAYEEELLEAAVPDLKKNIEKGLEFARK 319 (321)
T ss_pred HHhhcCCCCCeEEEEEEecCCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 998744445688998889999 689999999999999999999933999999999999999999999999999875
No 6
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=9.3e-64 Score=477.50 Aligned_cols=286 Identities=28% Similarity=0.416 Sum_probs=259.0
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCC---CeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTN---AVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~---~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
||+|||+ |+||+++|+.|+.+++++||+|+|+++ ++|+++||.|+..+ ..++... .|+ ++++|||+||++|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~--~~y-~~~~~aDivvita 76 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA--GDY-DDCADADIIVITA 76 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE--CCH-HHhCCCCEEEECC
Confidence 7999998 999999999999999999999999987 78999999997542 2455542 465 8899999999999
Q ss_pred CCCCCCCCC--HHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHH
Q 018265 123 GVPRKPGMT--RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRA 199 (358)
Q Consensus 123 g~~~~~g~~--r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~ 199 (358)
|.|++|||+ |+|++..|++++++++++|++++|++++|++|||+|+|||++ ++.+|||++||||+ |.|||+||
T Consensus 77 G~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~----~k~sg~p~~rviG~gt~LDs~R~ 152 (307)
T cd05290 77 GPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIA----ATEFDYPANKVIGTGTMLDTARL 152 (307)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHH----HHHhCcChhheecccchHHHHHH
Confidence 999999999 699999999999999999999999999999999999998765 78899999999999 99999999
Q ss_pred HHHHHHHhCCCCCCCceEEEEecCCCcccccccccCCCC-C---------CChhHHHHHHHHHhcCcceeeecccCCCcc
Q 018265 200 NTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-S---------LTPTEIDYLTDRIQNGGTEVVEAKTGAGSA 269 (358)
Q Consensus 200 ~~~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---------~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t 269 (358)
++++|+++|+++++|+++||||||+ +++|+||++++++ + .++.++++|.++++++|++|++. ||+|
T Consensus 153 ~~~la~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~---KG~t 228 (307)
T cd05290 153 RRIVADKYGVDPKNVTGYVLGEHGS-HAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNR---KGWT 228 (307)
T ss_pred HHHHHHHhCCCcccEEEEEEecCCC-ceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHc---cCee
Confidence 9999999999999999999999998 9999999998753 1 11224789999999999999994 5899
Q ss_pred cccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHH
Q 018265 270 TLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAG 347 (358)
Q Consensus 270 ~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~ 347 (358)
+|++|.++++++++|++|.+ .++|++ +++|+| ++++|+|+||++|++|+++++++ +|+++|+++|++|++.|++
T Consensus 229 ~~~ia~a~~~ii~ail~d~~---~v~~vsv~~~G~yg~~~v~~svP~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~i~~ 304 (307)
T cd05290 229 NAGIAKSASRLIKAILLDER---SILPVCTLLSGEYGLSDVALSLPTVIGAKGIERVLEI-PLDEWELEKLHKSAKAIRE 304 (307)
T ss_pred hHHHHHHHHHHHHHHHhCCC---eEEEEEEeeCCccCCCCEEEEEEEEEeCCCceEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999998864 588887 678998 78999999999999999999995 9999999999999999997
Q ss_pred HH
Q 018265 348 SI 349 (358)
Q Consensus 348 ~~ 349 (358)
.+
T Consensus 305 ~~ 306 (307)
T cd05290 305 TI 306 (307)
T ss_pred Hh
Confidence 64
No 7
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-62 Score=471.97 Aligned_cols=310 Identities=57% Similarity=0.889 Sum_probs=278.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHh-CCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~-~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~ 124 (358)
|||+||||+|.||+++++.+.. .+...+++|+|+++ ..++++|+.|......++.+ ..+|++++++|+|+||+++|.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~-~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEe-CCCCHHHHcCCCCEEEEcCCC
Confidence 7999999999999999999865 56778999999877 67788999985322334432 245767899999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEeeeccHHHHHHHHH
Q 018265 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVA 204 (358)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~lds~R~~~~lA 204 (358)
++++|++|.+++..|++++++++++|++++|+++++++|||+|+||+++++++++++++|++||||+|.||++|+++++|
T Consensus 80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~p~~rvig~~~Lds~R~~~~ia 159 (312)
T PRK05086 80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVA 159 (312)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCCCHHHEEeeecHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888899999999999998899999999999
Q ss_pred HHhCCCCCCCceEEEEecCCCcccccccccCCCCCCChhHHHHHHHHHhcCcceeeecccCCCcccccHHHHHHHHHHHH
Q 018265 205 EVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADAC 284 (358)
Q Consensus 205 ~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A~ai~~ii~ai 284 (358)
+++|+++++|+++||||||++++||+||++ -+.+++++++++|.++++++|++|++.|.|+|+|+||+|.++++++++|
T Consensus 160 ~~l~~~~~~v~~~v~GeHg~~s~~p~~S~~-~g~~l~~~~~~~i~~~v~~~g~~ii~~k~~~g~t~~~~a~a~~~~v~ai 238 (312)
T PRK05086 160 ELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238 (312)
T ss_pred HHhCCChhheEEEEEEecCCCceecccccc-CCccCCHHHHHHHHHHHHHHHHHHHhcccCCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999776899999999 3335777779999999999999999987677999999999999999999
Q ss_pred HccCCCCCcEEEeeEEeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhhC
Q 018265 285 LRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 358 (358)
Q Consensus 285 ~~~~~~~~~v~~~s~~~g~~~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~ 358 (358)
++++++++.++|+++++|+-.+++|||+||++|++|+++++++++|+++|+++|++|++.|++.+++|+.|+++
T Consensus 239 ~~~~~~~~~v~~~~~~~~~g~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~~~~g~~~~~~ 312 (312)
T PRK05086 239 VRALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312 (312)
T ss_pred HhcCCCCCcEEEEEEEeccCCcceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 98866566799988777753468999999999999999999955999999999999999999999999999975
No 8
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=4.2e-63 Score=475.48 Aligned_cols=296 Identities=28% Similarity=0.371 Sum_probs=262.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-N-AVVRGFLGQQQLEDALT 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~-----el~L~D~~~----~~g~~~dl~~~~~-~-~~v~~~~~t~d~~~al~ 113 (358)
+|.||+||||+|+||+++++.|+..++++ ||+|+|+++ ++|+++||+|+.. . ..++.. +.| +++++
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~ 78 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDP-EEAFK 78 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cCh-HHHhC
Confidence 57899999988999999999999999998 999999954 6999999999863 1 223332 344 58899
Q ss_pred CCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCccHHHHHHHHHHhC-CCCCCcEEEe
Q 018265 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVG-TYDPKRLLGV 191 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~~~-~~p~~kviG~ 191 (358)
|||+||++||.|+++||+|.|++..|++++++++++|++++| ++++|++|||+|++||++ ++.+ +||++||||+
T Consensus 79 daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG~ 154 (323)
T TIGR01759 79 DVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA----SKNAPDIPPKNFSAM 154 (323)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEe
Confidence 999999999999999999999999999999999999999998 999999999999998775 6788 9999999999
Q ss_pred eeccHHHHHHHHHHHhCCCCCCCc-eEEEEecCCCcccccccccCCCC----C-CChhH--HHHHHHHHhcCcceeeecc
Q 018265 192 TMLDVVRANTFVAEVLGLDPREVD-VPVVGGHAGVTILPLLSQVKPSC----S-LTPTE--IDYLTDRIQNGGTEVVEAK 263 (358)
Q Consensus 192 t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~~----~-~~~~~--~~~l~~~v~~~~~~ii~~~ 263 (358)
|.||++||++++|+++|+++++|+ .+||||||+ +++|+||++++.+ . ++++. +++|.+++++++++|++.
T Consensus 155 t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~- 232 (323)
T TIGR01759 155 TRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEA- 232 (323)
T ss_pred eHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC-ceeeccccCEECCccHHHHhcchhhHHHHHHHHHHhhHHHHHhc-
Confidence 999999999999999999999995 679999998 9999999998853 1 33333 579999999999999994
Q ss_pred cCCCcccc-cHHHHHHHHHHHHHccCCCCCcEEEee-EEeC-CC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHH
Q 018265 264 TGAGSATL-SMAYAAAKFADACLRGLRGDAGVIECA-YVAS-TV--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGL 338 (358)
Q Consensus 264 ~gkg~t~~-s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g-~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l 338 (358)
||+++| ++|.++++++++|++|++. +.++|++ +++| +| |+++|||+||++|++|++++++.++|+++|+++|
T Consensus 233 --kG~t~~~~~a~a~~~iv~ail~~~~~-~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l~L~~~E~~~l 309 (323)
T TIGR01759 233 --RGASSAASAANAAIDHVRDWVTGTPE-GDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGLPLDDFVRGKL 309 (323)
T ss_pred --cCCcchHHHHHHHHHHHHHHHcCCCC-CcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHH
Confidence 578999 4779999999999999732 2599998 7899 88 4899999999999999999999339999999999
Q ss_pred HHHHHHHHHHHHHh
Q 018265 339 EKAKKELAGSIQKG 352 (358)
Q Consensus 339 ~~s~~~l~~~~~~~ 352 (358)
++|++.|+++++++
T Consensus 310 ~~sa~~lk~~~~~~ 323 (323)
T TIGR01759 310 DATEDELLEEKEEA 323 (323)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999764
No 9
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=8.7e-63 Score=472.06 Aligned_cols=290 Identities=26% Similarity=0.371 Sum_probs=260.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCC-eEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNA-VVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~-~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
.+||+|||| |+||+++++.|+..++.+||+|+|+++ +.|+++||+|+.... ..+.. .++|| ++++|||+||+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~-~~~dy-~~~~~adivvita 79 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIE-ADKDY-SVTANSKVVIVTA 79 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEE-ECCCH-HHhCCCCEEEECC
Confidence 469999998 999999999999999999999999987 789999999986322 12222 34676 5699999999999
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHHH
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANT 201 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~~ 201 (358)
|.++++||+|.|++.+|+++++++++.|++++|++|+|++|||+|++|+++ ++++|+|++||||+ |.||++|+++
T Consensus 80 G~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~----~k~sg~p~~~viG~gt~Ld~~R~~~ 155 (312)
T cd05293 80 GARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYVA----WKLSGLPKHRVIGSGCNLDSARFRY 155 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHHHHHH----HHHhCCCHHHEEecCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998654 78889999999999 9999999999
Q ss_pred HHHHHhCCCCCCCceEEEEecCCCcccccccccCCCC------------CCChhHHHHHHHHHhcCcceeeecccCCCcc
Q 018265 202 FVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC------------SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSA 269 (358)
Q Consensus 202 ~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t 269 (358)
++|+++++++++|+++||||||+ +++|+||++++.+ ..+++++++|.++++++|++|++. ||+|
T Consensus 156 ~la~~l~v~~~~v~~~v~GeHG~-s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~---kg~t 231 (312)
T cd05293 156 LIAERLGVAPSSVHGWIIGEHGD-SSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIKL---KGYT 231 (312)
T ss_pred HHHHHhCCChhhEEEEEeecCCC-CccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHh---cCCc
Confidence 99999999999999999999998 8999999998853 112345889999999999999984 5899
Q ss_pred cccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018265 270 TLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELA 346 (358)
Q Consensus 270 ~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~ 346 (358)
+||+|.++++++++|++|++ .++|++ +++|.| +++++||+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus 232 ~~~~a~a~~~ii~ail~d~~---~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~i~ 307 (312)
T cd05293 232 SWAIGLSVADLVDAILRNTG---RVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIKQ-PLTEEEQEKLQKSADTLW 307 (312)
T ss_pred hHHHHHHHHHHHHHHHcCCC---eEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHH
Confidence 99999999999999999864 488887 678887 58999999999999999999995 999999999999999999
Q ss_pred HHHH
Q 018265 347 GSIQ 350 (358)
Q Consensus 347 ~~~~ 350 (358)
+.++
T Consensus 308 ~~~~ 311 (312)
T cd05293 308 EVQK 311 (312)
T ss_pred HHhh
Confidence 8764
No 10
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.5e-62 Score=444.07 Aligned_cols=290 Identities=26% Similarity=0.392 Sum_probs=264.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCC---CeEEEEeCCCcHHhhhCCCCEEEE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTN---AVVRGFLGQQQLEDALTGMDIVII 120 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~---~~v~~~~~t~d~~~al~~aDiVIi 120 (358)
..||+|+|+ |+||.+++..++.+++.+||+|+|.++ ++|++|||+|...+ +++.. +.|| .+.+++++||+
T Consensus 20 ~~KItVVG~-G~VGmAca~siL~k~Ladel~lvDv~~dklkGE~MDLqH~s~f~~~~~V~~---~~Dy-~~sa~S~lvIi 94 (332)
T KOG1495|consen 20 HNKITVVGV-GQVGMACAISILLKGLADELVLVDVNEDKLKGEMMDLQHGSAFLSTPNVVA---SKDY-SVSANSKLVII 94 (332)
T ss_pred CceEEEEcc-chHHHHHHHHHHHhhhhhceEEEecCcchhhhhhhhhccccccccCCceEe---cCcc-cccCCCcEEEE
Confidence 569999998 999999999999999999999999988 89999999998642 34432 4686 77899999999
Q ss_pred cCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHH
Q 018265 121 PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRA 199 (358)
Q Consensus 121 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~ 199 (358)
|||..+++|++|++++.+|+.+++.+.+++.+|.||+++|++|||+|+|||+. ||.+|||.+||||. |+||++||
T Consensus 95 TAGarq~~gesRL~lvQrNV~ifK~iip~lv~ySpd~~llvvSNPVDilTYv~----wKLSgfP~nRViGsGcnLDsaRF 170 (332)
T KOG1495|consen 95 TAGARQSEGESRLDLVQRNVDIFKAIIPALVKYSPDCILLVVSNPVDILTYVT----WKLSGFPKNRVIGSGCNLDSARF 170 (332)
T ss_pred ecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCchHHHHHHH----HHHcCCcccceeccCcCccHHHH
Confidence 99999999999999999999999999999999999999999999999998765 89999999999999 99999999
Q ss_pred HHHHHHHhCCCCCCCceEEEEecCCCcccccccccCCC------------CCCChhHHHHHHHHHhcCcceeeecccCCC
Q 018265 200 NTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPS------------CSLTPTEIDYLTDRIQNGGTEVVEAKTGAG 267 (358)
Q Consensus 200 ~~~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~------------~~~~~~~~~~l~~~v~~~~~~ii~~~~gkg 267 (358)
|+.++++||++|+++++||+||||+ +.||+||...+. ...+++.|+++.++|.+.+++|+++| |
T Consensus 171 ryLi~~~Lg~~pss~hgwIiGEHGd-SsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w~eihK~v~~sayeviklK---G 246 (332)
T KOG1495|consen 171 RYLIGNRLGVHPSSCHGWIIGEHGD-SSVPVWSGVNIAGVSLKDLNPDLGTDYDPENWKEIHKQVVDSAYEVIKLK---G 246 (332)
T ss_pred HHHHHHHhCCCcccceEEEeeccCC-ccceecccccccceEHhHhChhhcCCCCHHHHHHHHHHHHHHHHHHHHhc---C
Confidence 9999999999999999999999999 899999998763 13566789999999999999999965 8
Q ss_pred cccccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHH
Q 018265 268 SATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKE 344 (358)
Q Consensus 268 ~t~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~ 344 (358)
+|+|++|.++++++++|+.|++ ++.|++ .++|.| .+++|+|+||++|++|+..++.. +|+++|.++|.+|++.
T Consensus 247 yTswaIglsva~l~~ail~n~~---~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~~-~Lt~~E~akL~kSa~t 322 (332)
T KOG1495|consen 247 YTSWAIGLSVADLAQAILRNLR---RIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVKQ-KLTDEEVAKLKKSAKT 322 (332)
T ss_pred chHHHHHHHHHHHHHHHHhCcC---ceeeeeeccccccCCCCceEEecceeecCCchhhhhcc-cCCHHHHHHHHHHHHH
Confidence 9999999999999999999976 588998 468987 67999999999999999999996 9999999999999999
Q ss_pred HHHHHHHhh
Q 018265 345 LAGSIQKGV 353 (358)
Q Consensus 345 l~~~~~~~~ 353 (358)
|.+ +++.+
T Consensus 323 l~~-~q~~l 330 (332)
T KOG1495|consen 323 LLE-AQKSL 330 (332)
T ss_pred HHH-HHHhc
Confidence 975 44544
No 11
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=3.5e-62 Score=473.12 Aligned_cols=291 Identities=24% Similarity=0.373 Sum_probs=261.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTN-AVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
+||+|||+ |+||+++++.|+.+++++||+|+|+++ ++|+++||+|+... ...+.. .++|+ ++++|||+||++||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~~~dy-~~~~daDiVVitAG 114 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-ASTDY-AVTAGSDLCIVTAG 114 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-eCCCH-HHhCCCCEEEECCC
Confidence 69999998 999999999999999999999999987 78999999998632 223332 33576 66999999999999
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHHHH
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTF 202 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~~~ 202 (358)
.|+++||+|.|++.+|++++++++++|+++||++|+|++|||+|++|+++ ++.+|||++||||+ |.||++|++++
T Consensus 115 ~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~~----~k~sg~p~~rviG~gt~LDs~R~r~~ 190 (350)
T PLN02602 115 ARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYVA----WKLSGFPANRVIGSGTNLDSSRFRFL 190 (350)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH----HHHhCCCHHHEEeecchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998765 67789999999999 69999999999
Q ss_pred HHHHhCCCCCCCceEEEEecCCCcccccccccCCCC------------CCChhHHHHHHHHHhcCcceeeecccCCCccc
Q 018265 203 VAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC------------SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSAT 270 (358)
Q Consensus 203 lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~ 270 (358)
+|+++|+++++|+++||||||+ +++|+||.+++.. .+++++++++.++++++|++|++ +||+|+
T Consensus 191 lA~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~---~KG~t~ 266 (350)
T PLN02602 191 IADHLDVNAQDVQAYIVGEHGD-SSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIHRAVVDSAYEVIK---LKGYTS 266 (350)
T ss_pred HHHHhCCCccceeeeEEecCCC-ceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHHHHHHHHHHHHHh---cCCccH
Confidence 9999999999999999999998 9999999998732 13334578999999999999999 458999
Q ss_pred ccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC-C--CccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018265 271 LSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV-T--ELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELA 346 (358)
Q Consensus 271 ~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~--~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~ 346 (358)
||+|.++++++++|++|++ .++|++ +++|+| . +++|+|+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus 267 ~gia~a~a~ii~ail~d~~---~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~l-~L~~~E~~~l~~sa~~l~ 342 (350)
T PLN02602 267 WAIGYSVASLVRSLLRDQR---RIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVNV-HLTDEEAERLRKSAKTLW 342 (350)
T ss_pred HHHHHHHHHHHHHHHhcCC---CeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHH
Confidence 9999999999999999975 599998 568988 3 7899999999999999999995 999999999999999999
Q ss_pred HHHHHh
Q 018265 347 GSIQKG 352 (358)
Q Consensus 347 ~~~~~~ 352 (358)
+.++..
T Consensus 343 ~~~~~~ 348 (350)
T PLN02602 343 EVQSQL 348 (350)
T ss_pred HHHHHh
Confidence 887654
No 12
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-61 Score=466.04 Aligned_cols=298 Identities=22% Similarity=0.288 Sum_probs=262.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-N-AVVRGFLGQQQLEDALT 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~-----el~L~D~~~----~~g~~~dl~~~~~-~-~~v~~~~~t~d~~~al~ 113 (358)
+++||+||||+|+||+++++.|...++++ ||+|+|+++ ++|+++||+|+.+ . ..++.. +.+ +++++
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-y~~~~ 79 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDP-NVAFK 79 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cCh-HHHhC
Confidence 56899999988999999999999988888 999999954 6899999999862 1 234432 345 58899
Q ss_pred CCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhC-CCCCCcEEEe
Q 018265 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVG-TYDPKRLLGV 191 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~-~~p~~kviG~ 191 (358)
|||+||++||.|+++||+|.|++..|++++++++++|++|+ |++++|++|||+|++||++ ++.+ +||++||||+
T Consensus 80 daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG~ 155 (326)
T PRK05442 80 DADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIA----MKNAPDLPAENFTAM 155 (326)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHH----HHHcCCCCHHHEEee
Confidence 99999999999999999999999999999999999999988 7999999999999998775 6777 9999999999
Q ss_pred eeccHHHHHHHHHHHhCCCCCCCceE-EEEecCCCcccccccccCCCC----C-CChhH--HHHHHHHHhcCcceeeecc
Q 018265 192 TMLDVVRANTFVAEVLGLDPREVDVP-VVGGHAGVTILPLLSQVKPSC----S-LTPTE--IDYLTDRIQNGGTEVVEAK 263 (358)
Q Consensus 192 t~lds~R~~~~lA~~l~v~~~~v~~~-v~G~hg~~~~vp~~s~~~v~~----~-~~~~~--~~~l~~~v~~~~~~ii~~~ 263 (358)
|.||++||++++|+++++++++|+++ ||||||+ +++|+||++++.. + +++++ +++|.++++++|++|++.
T Consensus 156 t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~- 233 (326)
T PRK05442 156 TRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQAWLEDTFIPTVQKRGAAIIEA- 233 (326)
T ss_pred eHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC-ceeeccccCEECCEEHHHHccchhhHHHHHHHHHHhhHHHHHhC-
Confidence 99999999999999999999999986 5999998 9999999998853 1 34433 568999999999999994
Q ss_pred cCCCcccccHHHH-HHHHHHHHHccCCCCCcEEEee-EEeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018265 264 TGAGSATLSMAYA-AAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 339 (358)
Q Consensus 264 ~gkg~t~~s~A~a-i~~ii~ai~~~~~~~~~v~~~s-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~ 339 (358)
||+++|++|.+ +++++++|++|.+. +.++|++ +++|+| |+++|||+||++| +|+++++..++|+++|+++|+
T Consensus 234 --kG~t~~~~a~~~~~~iv~ail~~~~~-~~i~~~sv~~~g~ygi~~~v~~s~P~~ig-~Gv~~iv~~l~L~~~E~~~l~ 309 (326)
T PRK05442 234 --RGASSAASAANAAIDHVRDWVLGTPE-GDWVSMGVPSDGSYGIPEGLIFGFPVTCE-NGEYEIVQGLEIDDFSREKID 309 (326)
T ss_pred --cCCccHHHHHHHHHHHHHHHHhCCCC-CeEEEEEEEecCccCCcCCeEEEEEEEEc-CcEEEEeCCCCCCHHHHHHHH
Confidence 58999999999 59999999998531 2599998 569998 5899999999999 999999663499999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 018265 340 KAKKELAGSIQKGVSF 355 (358)
Q Consensus 340 ~s~~~l~~~~~~~~~~ 355 (358)
+|++.|+++.+.+..+
T Consensus 310 ~s~~~l~~~~~~~~~~ 325 (326)
T PRK05442 310 ATLAELEEERDAVKHL 325 (326)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999888765
No 13
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=4.4e-61 Score=461.37 Aligned_cols=291 Identities=25% Similarity=0.410 Sum_probs=263.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTN-AVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
.+||+|||| |.||+++++.|+..++++||+|+|+++ ++|+++||.|+... ..++.. ++|+ ++++|||+||+++
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~--~~~~-~~~~~adivIita 81 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY--AGDY-SDCKDADLVVITA 81 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE--eCCH-HHhCCCCEEEEec
Confidence 359999998 999999999999999999999999987 78999999998632 234443 3465 7799999999999
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHHH
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANT 201 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~~ 201 (358)
|.|+++|++|.|++..|+++++++++.+++++|++|+|++|||+|++|+++ ++++++|++||||+ |.||+.|+++
T Consensus 82 g~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d~~~~~~----~k~sg~p~~~viG~gt~LDs~R~~~ 157 (315)
T PRK00066 82 GAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVDILTYAT----WKLSGFPKERVIGSGTSLDSARFRY 157 (315)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHHHHHHHH----HHHhCCCHHHEeecCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998764 67789999999999 7999999999
Q ss_pred HHHHHhCCCCCCCceEEEEecCCCcccccccccCCCC-----------CCChhHHHHHHHHHhcCcceeeecccCCCccc
Q 018265 202 FVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-----------SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSAT 270 (358)
Q Consensus 202 ~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-----------~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~ 270 (358)
++|+++|+++++|+++||||||+ +++|+||++++++ .+++++++++.++++++++++++. ||+++
T Consensus 158 ~la~~l~v~~~~V~~~viGeHG~-s~v~~~S~~~v~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~---kg~t~ 233 (315)
T PRK00066 158 MLSEKLDVDPRSVHAYIIGEHGD-TEFPVWSHANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIEK---KGATY 233 (315)
T ss_pred HHHHHhCCCcccEEEEEEecCCC-cceecceeceECCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHHHhc---CCeeh
Confidence 99999999999999999999998 8999999998742 144466889999999999999994 57999
Q ss_pred ccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 018265 271 LSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGS 348 (358)
Q Consensus 271 ~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~ 348 (358)
||+|.++++++++|+++++ .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|++.|++.
T Consensus 234 ~~~a~~~~~i~~ail~~~~---~v~~~sv~~~g~yg~~~v~~S~Pv~ig~~Gv~~i~~l-~L~~~E~~~L~~s~~~l~~~ 309 (315)
T PRK00066 234 YGIAMALARITKAILNNEN---AVLPVSAYLEGQYGEEDVYIGVPAVVNRNGIREIVEL-PLNDDEKQKFAHSADVLKEI 309 (315)
T ss_pred HHHHHHHHHHHHHHHcCCC---eEEEEEEEeccccCCCCEEEEeEEEEeCCcEEEEcCC-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999854 588997 679999 78999999999999999999995 99999999999999999998
Q ss_pred HHHh
Q 018265 349 IQKG 352 (358)
Q Consensus 349 ~~~~ 352 (358)
++..
T Consensus 310 ~~~~ 313 (315)
T PRK00066 310 MDEA 313 (315)
T ss_pred HHHh
Confidence 8754
No 14
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.4e-60 Score=433.26 Aligned_cols=337 Identities=68% Similarity=1.066 Sum_probs=313.0
Q ss_pred hHHHHHHHhhcCCCccccccccccccccccCCCCCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHH
Q 018265 9 NQRIARIAAHLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA 88 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~ 88 (358)
.+++.+..+++.+ +...|.+.+..+..||+|.||+|-||+.+.++|+.+++.+++.|||+....|.+.
T Consensus 3 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaa 70 (345)
T KOG1494|consen 3 LKSLIRSSASLSS------------GPKRVFSSGSQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAA 70 (345)
T ss_pred hHHHHHhhhhhcc------------CCcccccccccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccc
Confidence 3455566666632 3344555666777899999999999999999999999999999999998999999
Q ss_pred HHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCc
Q 018265 89 DISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNS 168 (358)
Q Consensus 89 dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~ 168 (358)
||.|..+...+.++.+...+++|+++||+|||.||+||||||+|.|++..|+.|+++++..+.++||++.+.++|||+|.
T Consensus 71 DlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNPVNs 150 (345)
T KOG1494|consen 71 DLSHINTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNPVNS 150 (345)
T ss_pred cccccCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCcccc
Confidence 99999988888888777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCC-CCCceEEEEecCCCcccccccccCCCCCCChhHHHH
Q 018265 169 TVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDP-REVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDY 247 (358)
Q Consensus 169 ~t~~~~~~~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~-~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~ 247 (358)
..+++++++++.+.|+++|++|+|.||..|.+.++++.++++| ++++++|+|+|.+.|++|++|+..+...+++++++.
T Consensus 151 tVPIaaevlKk~G~ydpkklfGVTtLDvVRA~tFv~~~~~~~p~~~v~VPVIGGHaG~TIlPLlSQ~~p~~~~~~~~~~~ 230 (345)
T KOG1494|consen 151 TVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEVLNLDPAEDVDVPVIGGHAGITIIPLLSQCKPPFRFTDDEIEA 230 (345)
T ss_pred cchHHHHHHHHcCCCCccceeceehhhhhhHHHHHHHHhCCCchhcCCcceecCcCCceEeeecccCCCcccCCHHHHHH
Confidence 9999999999999999999999999999999999999999999 559999999999999999999999888899999999
Q ss_pred HHHHHhcCcceeeecccCCCcccccHHHHHHHHHHHHHccCCCCCcEEEeeEEeCCCCCccEEEEEEEEcCCceEEEccC
Q 018265 248 LTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSL 327 (358)
Q Consensus 248 l~~~v~~~~~~ii~~~~gkg~t~~s~A~ai~~ii~ai~~~~~~~~~v~~~s~~~g~~~~~~~~svPv~ig~~Gv~~i~~~ 327 (358)
|+.+++..|.|+.++|.|+||+.+|+|+|.+++..+++++.+++..++.|+|+.+..-+-.||+.|+++|++|++++..+
T Consensus 231 Lt~RiQ~gGtEVV~AKaGaGSATLSMAyAga~fa~s~lrgl~G~~~v~ecafV~s~~~~~~fFaspv~Lg~~Gv~~v~~l 310 (345)
T KOG1494|consen 231 LTHRIQNGGTEVVKAKAGAGSATLSMAYAGAKFADSLLRGLNGDEDVVECAFVASPVTELPFFATPVTLGKKGVEEVLGL 310 (345)
T ss_pred HHHHHHhCCceEEEeccCCCchhhhHHHHHHHHHHHHHHHhCCCCCeEEEeEEeccccCccceeceEEecCCceeeecCC
Confidence 99999999999999999999999999999999999999999887778899999887546779999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018265 328 GPLNEYERAGLEKAKKELAGSIQKGVSFVR 357 (358)
Q Consensus 328 ~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~ 357 (358)
++|+++|++.|+.+..+|++.|+++++|+.
T Consensus 311 ~~lsd~E~~~l~~~~~eLk~sI~KGv~F~~ 340 (345)
T KOG1494|consen 311 GKLSDYEEKALEAAKPELKKSIEKGVTFVK 340 (345)
T ss_pred CccCHHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence 999999999999999999999999999975
No 15
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=1.7e-61 Score=460.89 Aligned_cols=281 Identities=25% Similarity=0.444 Sum_probs=253.6
Q ss_pred EEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCCEEEEcCCCCC
Q 018265 51 VLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTN--AVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (358)
Q Consensus 51 IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~t~d~~~al~~aDiVIi~ag~~~ 126 (358)
|||+ |+||+++++.|+..++++||+|+|+++ ++|+++||+|+... ..++.. ..|+ ++++|||+||+++|.||
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~~-~~~~daDivVitag~~r 76 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR--SGDY-SDCKDADLVVITAGAPQ 76 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe--cCCH-HHHCCCCEEEECCCCCC
Confidence 6898 999999999999999999999999987 79999999998642 234443 3464 88999999999999999
Q ss_pred CCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHHHHHHH
Q 018265 127 KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAE 205 (358)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~~~lA~ 205 (358)
++||+|.|++.+|++++++++++|++++|++++|++|||+|++|+++ ++.+++|++||||+ |.||++|+++++|+
T Consensus 77 k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~----~~~sg~p~~~viG~gt~LDs~R~~~~la~ 152 (299)
T TIGR01771 77 KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYVA----WKLSGFPKNRVIGSGTVLDTARLRYLLAE 152 (299)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH----HHHhCCCHHHEEeccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998764 67789999999999 89999999999999
Q ss_pred HhCCCCCCCceEEEEecCCCcccccccccCCCC-C---C-------ChhHHHHHHHHHhcCcceeeecccCCCcccccHH
Q 018265 206 VLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-S---L-------TPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMA 274 (358)
Q Consensus 206 ~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~---~-------~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A 274 (358)
++|+++++|+++|||+||+ +++|+||++++.+ + + .+.++++|.++++++|++|++. ||+|+|++|
T Consensus 153 ~l~v~~~~V~~~v~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~---kG~t~~~~a 228 (299)
T TIGR01771 153 KLGVDPQSVHAYIIGEHGD-SEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINR---KGATYYGIG 228 (299)
T ss_pred HhCcCcCeEEEEEEecCCC-ceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhc---CCeeeHHHH
Confidence 9999999999999999998 9999999998743 1 2 1234679999999999999994 589999999
Q ss_pred HHHHHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHH
Q 018265 275 YAAAKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAG 347 (358)
Q Consensus 275 ~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~ 347 (358)
.++++++++|++|++ .++||+ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++|++.||+
T Consensus 229 ~a~~~~i~ail~d~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~ik~ 299 (299)
T TIGR01771 229 MAVARIVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEAFQKSAETLKK 299 (299)
T ss_pred HHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCEEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHhC
Confidence 999999999999864 599997 789998 57899999999999999999995 9999999999999999973
No 16
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=7.2e-61 Score=473.25 Aligned_cols=300 Identities=22% Similarity=0.258 Sum_probs=264.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhC-------CCCcEEEEEeCCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhh
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKIN-------PLVSVLHLYDVVN--TPGVTADISHMDT--NAVVRGFLGQQQLEDAL 112 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~-------~~~~el~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al 112 (358)
.++.||+||||+|+||+++++.|+.+ ++..||+|+|+++ ++|++|||+|+.+ ...+... +.| ++++
T Consensus 98 ~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~--~~~-ye~~ 174 (444)
T PLN00112 98 KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG--IDP-YEVF 174 (444)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe--cCC-HHHh
Confidence 45689999999899999999999998 6777999999988 8999999999863 1234332 345 5889
Q ss_pred CCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHh-hCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe
Q 018265 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAK-CCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~ 191 (358)
+|||+||+++|.|+++||+|.|++..|++|+++++++|++ ++|++++|++|||+|++|+++ ++.++++++|+||+
T Consensus 175 kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~----~k~sg~~~~rViGt 250 (444)
T PLN00112 175 QDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALIC----LKNAPNIPAKNFHA 250 (444)
T ss_pred CcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHH----HHHcCCCCcceEEe
Confidence 9999999999999999999999999999999999999999 589999999999999998765 67889999999999
Q ss_pred -eeccHHHHHHHHHHHhCCCCCCC-ceEEEEecCCCcccccccccCCCC-C----CChhH--HHHHHHHHhcCcceeeec
Q 018265 192 -TMLDVVRANTFVAEVLGLDPREV-DVPVVGGHAGVTILPLLSQVKPSC-S----LTPTE--IDYLTDRIQNGGTEVVEA 262 (358)
Q Consensus 192 -t~lds~R~~~~lA~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~l~~~v~~~~~~ii~~ 262 (358)
|.||++||+++||+++|+++++| +++||||||+ ++||+||++++++ + +++.+ +++|.++++++|++|++.
T Consensus 251 gT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd-sqvp~wS~a~V~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~~ 329 (444)
T PLN00112 251 LTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKINGLPVKEVITDHKWLEEEFTPKVQKRGGVLIKK 329 (444)
T ss_pred eccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC-ceeeccceeEECCccHHHhhccccchHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999 6699999999 9999999999853 1 33333 578999999999999984
Q ss_pred ccCCCcccc-cHHHHHHHHHHHHHccCCCCCcEEEee-EEeC-CC--CCccEEEEEEEEcCCceEEEc-cCCCCCHHHHH
Q 018265 263 KTGAGSATL-SMAYAAAKFADACLRGLRGDAGVIECA-YVAS-TV--TELPFFASKVRLGRAGIEEIY-SLGPLNEYERA 336 (358)
Q Consensus 263 ~~gkg~t~~-s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g-~~--~~~~~~svPv~ig~~Gv~~i~-~~~~L~~~E~~ 336 (358)
||++.| ++|.++++++++|+++.+ ++.++|++ +++| +| ++|++||+||++|++|+++++ ++ +|+++|++
T Consensus 330 ---kG~t~~~s~a~ai~~~I~ail~~~d-~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el-~L~~~E~~ 404 (444)
T PLN00112 330 ---WGRSSAASTAVSIADAIKSLVTPTP-EGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDV-EIDDYLRE 404 (444)
T ss_pred ---cCchhHHHHHHHHHHHHHHHHcCCC-CCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCC-CCCHHHHH
Confidence 566766 999999999999995444 33599998 6799 48 589999999999999999999 65 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhhh
Q 018265 337 GLEKAKKELAGSIQKGVSFV 356 (358)
Q Consensus 337 ~l~~s~~~l~~~~~~~~~~~ 356 (358)
+|++|+++|+++.+.+.+.+
T Consensus 405 ~l~~Sa~~L~~e~~~~~~~~ 424 (444)
T PLN00112 405 RIKKSEAELLAEKRCVAHLT 424 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887654
No 17
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=8.9e-61 Score=459.98 Aligned_cols=294 Identities=28% Similarity=0.388 Sum_probs=259.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--NAVVRGFLGQQQLEDALTGM 115 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~-----el~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al~~a 115 (358)
.||+||||+|+||+++++.|+..++++ +|+|+|+++ ++|+++||.|+.+ ....... +.+ +++++||
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~--~~~-~~~~~~a 77 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT--TDP-EEAFKDV 77 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe--cCh-HHHhCCC
Confidence 489999999999999999999988887 599999975 6899999999852 1223322 234 6899999
Q ss_pred CEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCC-CCCCcEEEeee
Q 018265 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGT-YDPKRLLGVTM 193 (358)
Q Consensus 116 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~-~p~~kviG~t~ 193 (358)
|+||++||.|+++|++|.|++..|++++++++++|+++| |++++|++|||+|++|+++ ++.+| +|++||||+|.
T Consensus 78 DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~vig~t~ 153 (323)
T cd00704 78 DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIA----LKNAPNLPPKNFTALTR 153 (323)
T ss_pred CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEeeH
Confidence 999999999999999999999999999999999999996 9999999999999998765 67888 59999999999
Q ss_pred ccHHHHHHHHHHHhCCCCCCC-ceEEEEecCCCcccccccccCCCCC----C----ChhH--HHHHHHHHhcCcceeeec
Q 018265 194 LDVVRANTFVAEVLGLDPREV-DVPVVGGHAGVTILPLLSQVKPSCS----L----TPTE--IDYLTDRIQNGGTEVVEA 262 (358)
Q Consensus 194 lds~R~~~~lA~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~~----~----~~~~--~~~l~~~v~~~~~~ii~~ 262 (358)
||++||++++|+++++++++| +++||||||+ +++|+||++++... + .+++ .++|.+++++++++|++.
T Consensus 154 LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~ 232 (323)
T cd00704 154 LDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKK 232 (323)
T ss_pred HHHHHHHHHHHHHhCcCHHHceeeeEEecccC-ceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhc
Confidence 999999999999999999999 5689999999 99999999987431 1 2223 578999999999999994
Q ss_pred ccCCCccccc-HHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHH
Q 018265 263 KTGAGSATLS-MAYAAAKFADACLRGLRGDAGVIECA-YVASTV---TELPFFASKVRLGRAGIEEIYSLGPLNEYERAG 337 (358)
Q Consensus 263 ~~gkg~t~~s-~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~ 337 (358)
||+++|+ +|.++++++++|++|++++ .++||+ +++|+| |++++||+||++|++|+++++++ +|+++|+++
T Consensus 233 ---kg~t~~~~~a~a~~~iv~ail~~~~~~-~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~ 307 (323)
T cd00704 233 ---RGASSAASAAKAIADHVKDWLFGTPPG-EIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVEDL-KLNDWLREK 307 (323)
T ss_pred ---cCcchhHHHHHHHHHHHHHHHhCCCCC-cEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecCC-CCCHHHHHH
Confidence 5788896 6999999999999998643 499997 789987 47999999999999999999995 999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 018265 338 LEKAKKELAGSIQKGV 353 (358)
Q Consensus 338 l~~s~~~l~~~~~~~~ 353 (358)
|++|++.|+++.+.++
T Consensus 308 l~~s~~~l~~~~~~~~ 323 (323)
T cd00704 308 LKATEEELIEEKEIAL 323 (323)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999998764
No 18
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=1.3e-60 Score=465.05 Aligned_cols=300 Identities=22% Similarity=0.268 Sum_probs=261.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEE--eCCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhh
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLY--DVVN--TPGVTADISHMDT--NAVVRGFLGQQQLEDAL 112 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~-----el~L~--D~~~--~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al 112 (358)
.++.||+||||+|+||+++++.|+..++++ +|+|+ |+++ ++|+++||+|+.+ ...+... +.| ++++
T Consensus 42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~--~~~-y~~~ 118 (387)
T TIGR01757 42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG--IDP-YEVF 118 (387)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe--cCC-HHHh
Confidence 346899999998999999999999999987 67777 5555 7999999999862 1233332 345 5889
Q ss_pred CCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe
Q 018265 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~ 191 (358)
+|||+||+++|.||++|++|.|++..|+++++++++.|++++ |++++|++|||+|++|+++ ++.+++|++|+||+
T Consensus 119 kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~----~k~sg~~~~rviG~ 194 (387)
T TIGR01757 119 EDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIA----MKNAPNIPRKNFHA 194 (387)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHH----HHHcCCCcccEEEe
Confidence 999999999999999999999999999999999999999987 9999999999999998765 67889999999999
Q ss_pred -eeccHHHHHHHHHHHhCCCCCCC-ceEEEEecCCCcccccccccCCCC-C----CChhH--HHHHHHHHhcCcceeeec
Q 018265 192 -TMLDVVRANTFVAEVLGLDPREV-DVPVVGGHAGVTILPLLSQVKPSC-S----LTPTE--IDYLTDRIQNGGTEVVEA 262 (358)
Q Consensus 192 -t~lds~R~~~~lA~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~l~~~v~~~~~~ii~~ 262 (358)
|.||++||+++||+++++++++| +++||||||+ +++|+||++++.+ + +++.+ +++|.++++++|++|++.
T Consensus 195 gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd-s~vp~~S~a~V~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~~ 273 (387)
T TIGR01757 195 LTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST-TQVPDFVNAKIGGRPAKEVIKDTKWLEEEFTPTVQKRGGALIKK 273 (387)
T ss_pred cchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC-cEEecceeeEECCEEhHHhcccccchHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999 5999999998 9999999998853 1 22223 679999999999999984
Q ss_pred ccCCCcccc-cHHHHHHHHHHHHHccCCCCCcEEEee-EEeCC-C--CCccEEEEEEEEcCCceEEEc-cCCCCCHHHHH
Q 018265 263 KTGAGSATL-SMAYAAAKFADACLRGLRGDAGVIECA-YVAST-V--TELPFFASKVRLGRAGIEEIY-SLGPLNEYERA 336 (358)
Q Consensus 263 ~~gkg~t~~-s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~-~--~~~~~~svPv~ig~~Gv~~i~-~~~~L~~~E~~ 336 (358)
||++.| |+|.++++++++|+++.+. +.++|++ +++|+ | +++++||+||++|++|+++++ ++ +|+++|++
T Consensus 274 ---KG~t~~~s~a~ai~~~i~ai~~g~d~-~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~l-~L~~~E~~ 348 (387)
T TIGR01757 274 ---WGRSSAASTAVSIADAIKSLVVPTPE-GDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATDV-SMDDFLRE 348 (387)
T ss_pred ---cCchhHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCCC-CCCHHHHH
Confidence 466666 9999999999999955442 3599997 56996 8 489999999999999999997 74 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhhh
Q 018265 337 GLEKAKKELAGSIQKGVSFV 356 (358)
Q Consensus 337 ~l~~s~~~l~~~~~~~~~~~ 356 (358)
+|++|++.|+++.+.+++.+
T Consensus 349 ~l~~Sa~~L~~e~~~~~~~~ 368 (387)
T TIGR01757 349 RIRKSEDELLKEKECVAHLI 368 (387)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999887754
No 19
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=4.9e-60 Score=454.63 Aligned_cols=296 Identities=23% Similarity=0.308 Sum_probs=262.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--NAVVRGFLGQQQLEDALT 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~-----el~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al~ 113 (358)
|++||+||||+|+||+++++.|+..++++ ||+|+|+++ ++|+++||+|+.+ ...++.. +.| +++++
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~ 77 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDP-NVAFK 77 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCc-HHHhC
Confidence 46799999988999999999999999999 999999954 6899999999863 1234432 345 58899
Q ss_pred CCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhC-CCCCCcEEEe
Q 018265 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVG-TYDPKRLLGV 191 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~-~~p~~kviG~ 191 (358)
|||+||++||.|+++|++|.+++..|++++++++++|++++ |++++|++|||+|++|+++ ++.+ ++|++||||+
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~ViG~ 153 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA----MKNAPDIPPDNFTAM 153 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH----HHHcCCCChHheEEe
Confidence 99999999999999999999999999999999999999999 5999999999999998775 6777 5999999999
Q ss_pred eeccHHHHHHHHHHHhCCCCCCCce-EEEEecCCCcccccccccCCCC-C----CChhH--HHHHHHHHhcCcceeeecc
Q 018265 192 TMLDVVRANTFVAEVLGLDPREVDV-PVVGGHAGVTILPLLSQVKPSC-S----LTPTE--IDYLTDRIQNGGTEVVEAK 263 (358)
Q Consensus 192 t~lds~R~~~~lA~~l~v~~~~v~~-~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~--~~~l~~~v~~~~~~ii~~~ 263 (358)
|.||++||++.+|+++|+++++|++ +|||+||+ +++|+||++++.. + +.+.+ +++|.+++++++++|++.
T Consensus 154 t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~- 231 (322)
T cd01338 154 TRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKA- 231 (322)
T ss_pred hHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHHHhcChHhhHHHHHHHHHHhhHHHHHhC-
Confidence 9999999999999999999999997 56999998 9999999998742 1 34433 579999999999999994
Q ss_pred cCCCcccccHH-HHHHHHHHHHHccCCCCCcEEEee-EEeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018265 264 TGAGSATLSMA-YAAAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 339 (358)
Q Consensus 264 ~gkg~t~~s~A-~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~ 339 (358)
||+++|+++ .++++++++|++|++. +.++|++ +++|+| |++++||+||++|++|+++++++ +|+++|+++|+
T Consensus 232 --kG~t~~~~~a~a~~~iv~ail~~~~~-~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~ 307 (322)
T cd01338 232 --RGASSAASAANAAIDHMRDWVLGTPE-GDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEGL-EIDDFAREKID 307 (322)
T ss_pred --cCCccHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeCC-CCCHHHHHHHH
Confidence 589999999 5999999999999852 2588997 569998 58999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhh
Q 018265 340 KAKKELAGSIQKGV 353 (358)
Q Consensus 340 ~s~~~l~~~~~~~~ 353 (358)
+|++.|+++.+++.
T Consensus 308 ~s~~~l~~~~~~~~ 321 (322)
T cd01338 308 ATLAELLEEREAVK 321 (322)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 20
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-59 Score=449.84 Aligned_cols=297 Identities=31% Similarity=0.511 Sum_probs=265.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCCEEEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTN--AVVRGFLGQQQLEDALTGMDIVII 120 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~t~d~~~al~~aDiVIi 120 (358)
+.+||+|||| |+||+++++.++..++ .+|+|+|+++ +.|+++|+.|.... ...+.. .++|++ +++|||+||+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~-~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~-~~~d~~-~l~~ADiVVi 79 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL-GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINIL-GTNNYE-DIKDSDVVVI 79 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEECCCccchhHHHHHhhhccccCCCeEEE-eCCCHH-HhCCCCEEEE
Confidence 5679999998 9999999999999887 5899999987 67899999997532 123332 346874 8999999999
Q ss_pred cCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEee-eccHHHH
Q 018265 121 PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT-MLDVVRA 199 (358)
Q Consensus 121 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t-~lds~R~ 199 (358)
++|.++++|++|.|++..|.+++++++++|+++||++|+|++|||+|++++++ ++++++|++||+|+| .||++|+
T Consensus 80 tag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~~----~~~s~~p~~rviG~gt~lds~R~ 155 (319)
T PTZ00117 80 TAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPLDCMVKVF----QEKSGIPSNKICGMAGVLDSSRF 155 (319)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHHH----HHhhCCCcccEEEecchHHHHHH
Confidence 99999999999999999999999999999999999999999999999998654 678899999999995 8999999
Q ss_pred HHHHHHHhCCCCCCCceEEEEecCCCcccccccccCCCC----------CCChhHHHHHHHHHhcCcceeeecccCCCcc
Q 018265 200 NTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----------SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSA 269 (358)
Q Consensus 200 ~~~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t 269 (358)
++.+|+++|+++++|+++|+||||+ +++|+||++++.+ .+.+++++++.++++++|++|++.+ |||++
T Consensus 156 ~~~la~~l~v~~~~v~~~viGeHg~-~~v~~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~~-~kg~t 233 (319)
T PTZ00117 156 RCNLAEKLGVSPGDVSAVVIGGHGD-LMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKLL-KKGSA 233 (319)
T ss_pred HHHHHHHhCCCcccceEEEeecCCC-cEEeceeeceECCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHhhc-CCCCh
Confidence 9999999999999999999999998 8999999998742 1455568899999999999999976 68999
Q ss_pred cccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHH
Q 018265 270 TLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAG 347 (358)
Q Consensus 270 ~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~ 347 (358)
+||+|.++++++++|++|.+ .++|++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++
T Consensus 234 ~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~l~~ 309 (319)
T PTZ00117 234 FFAPAAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNLFVGVPVVIGGKGIEKVIEL-ELNAEEKELFDKSIESIQE 309 (319)
T ss_pred HHHHHHHHHHHHHHHhcCCC---eEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999864 599997 679998 46999999999999999999995 9999999999999999999
Q ss_pred HHHHhhhh
Q 018265 348 SIQKGVSF 355 (358)
Q Consensus 348 ~~~~~~~~ 355 (358)
.+++...+
T Consensus 310 ~~~~~~~~ 317 (319)
T PTZ00117 310 LTQKAKAL 317 (319)
T ss_pred HHHHHHHh
Confidence 98866543
No 21
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=2.1e-59 Score=449.05 Aligned_cols=288 Identities=27% Similarity=0.422 Sum_probs=258.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--NAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+||+|||+ |.+|+++++.|+..++..+|+|+|++. ++++++||.|+.. ....... +.++ +++++||+||+++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~--~~~~-~~l~~aDIVIita 76 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK--AGDY-SDCKDADIVVITA 76 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE--cCCH-HHhCCCCEEEEcc
Confidence 38999998 999999999999999888999999987 6889999998753 1223332 2455 6799999999999
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHHH
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANT 201 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~~ 201 (358)
|.|+++||+|.+++.+|++++++++++|++++|++++|++|||+|++|+++ ++++++|++||||+ |.||++|+++
T Consensus 77 g~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~----~~~~g~p~~~v~g~gt~LDs~R~~~ 152 (306)
T cd05291 77 GAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVV----QKLSGLPKNRVIGTGTSLDTARLRR 152 (306)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHH----HHHhCcCHHHEeeccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998664 67799999999999 7999999999
Q ss_pred HHHHHhCCCCCCCceEEEEecCCCcccccccccCCCC----------CCChhHHHHHHHHHhcCcceeeecccCCCcccc
Q 018265 202 FVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----------SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATL 271 (358)
Q Consensus 202 ~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~ 271 (358)
++|+++|+++++|+++|||+||+ +++|+||++++.+ .+.+++++++.++++++|++|++. ||+++|
T Consensus 153 ~la~~l~v~~~~v~~~V~G~Hg~-s~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~---kg~t~~ 228 (306)
T cd05291 153 ALAEKLNVDPRSVHAYVLGEHGD-SQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIING---KGATYY 228 (306)
T ss_pred HHHHHHCCCcccceEEEEecCCC-ceeecceeeEEcCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHHc---cCccHH
Confidence 99999999999999999999998 8999999998742 133456889999999999999994 589999
Q ss_pred cHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018265 272 SMAYAAAKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSI 349 (358)
Q Consensus 272 s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~ 349 (358)
++|.++++++++|++|.+ .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++.+
T Consensus 229 ~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~l~~~~ 304 (306)
T cd05291 229 GIATALARIVKAILNDEN---AILPVSAYLDGEYGEKDVYIGVPAIIGRNGVEEVIEL-DLTEEEQEKFEKSADIIKENI 304 (306)
T ss_pred HHHHHHHHHHHHHHcCCC---EEEEEEEEeccccCCCCEEEEEEEEEeCCCEEEEECC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999854 588997 679999 77999999999999999999995 999999999999999999876
Q ss_pred H
Q 018265 350 Q 350 (358)
Q Consensus 350 ~ 350 (358)
+
T Consensus 305 ~ 305 (306)
T cd05291 305 K 305 (306)
T ss_pred h
Confidence 4
No 22
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=2.9e-59 Score=446.54 Aligned_cols=286 Identities=29% Similarity=0.444 Sum_probs=257.5
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTN-AVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~-~~v~~~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
|+|||+ |.||+++++.++..+++.||+|+|+++ +.|+++||.|.... ...+... ++|+ ++++|||+||+++|.|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~-~~~~-~~l~~aDiVIitag~p 77 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR-GGDY-ADAADADIVVITAGAP 77 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE-CCCH-HHhCCCCEEEEcCCCC
Confidence 689998 999999999999999999999999987 78999999998643 2233332 3565 7899999999999999
Q ss_pred CCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHHHHHH
Q 018265 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVA 204 (358)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~~~lA 204 (358)
+++|++|.+++.+|++++++++++|+++||++|+|++|||+|++|+++ ++++|+|++||||+ |.||+.|+++++|
T Consensus 78 ~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP~d~~~~~~----~~~sg~~~~kviG~gt~lDs~r~~~~la 153 (300)
T cd00300 78 RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYVA----QKLSGLPKNRVIGSGTLLDSARFRSLLA 153 (300)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccChHHHHHHHH----HHHhCcCHHHEEecCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998754 78889999999999 7999999999999
Q ss_pred HHhCCCCCCCceEEEEecCCCcccccccccCCCC-C----C--ChhHHHHHHHHHhcCcceeeecccCCCcccccHHHHH
Q 018265 205 EVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-S----L--TPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAA 277 (358)
Q Consensus 205 ~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~--~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A~ai 277 (358)
+++++++++|+++|+|+||+ +++|+||++++.+ + + +++.+++|.+++++++++|++. ||+++||+|.++
T Consensus 154 ~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~v~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~~---kg~t~~~~a~a~ 229 (300)
T cd00300 154 EKLDVDPQSVHAYVLGEHGD-SQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRL---KGATNYGIATAI 229 (300)
T ss_pred HHhCCCcccEEEEEEeccCC-ceeeeeeeeEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHc---cCcchHHHHHHH
Confidence 99999999999999999998 8999999998753 1 1 2345789999999999999984 589999999999
Q ss_pred HHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018265 278 AKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSI 349 (358)
Q Consensus 278 ~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~ 349 (358)
++++++|++|.+ .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus 230 ~~~~~ai~~~~~---~v~~~s~~~~g~yg~~~~~~s~Pv~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd00300 230 ADIVKSILLDER---RVLPVSAVQEGQYGIEDVALSVPAVVGREGVVRILEI-PLTEDEEAKLQKSAEALKEVL 299 (300)
T ss_pred HHHHHHHHcCCC---eEEEEEEEecCccCCCCEEEEEEEEEeCCCeEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999864 589998 568999 78999999999999999999995 999999999999999999765
No 23
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=1e-58 Score=445.86 Aligned_cols=292 Identities=32% Similarity=0.580 Sum_probs=261.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCCEEEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--NAVVRGFLGQQQLEDALTGMDIVII 120 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al~~aDiVIi 120 (358)
+.+||+|||| |+||+++++.++..++ .+|+|+|+++ +.+.++|+.|... ....+.. .++|+ ++++|||+||+
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl-~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~-~~~d~-~~l~~aDiVI~ 80 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNL-GDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI-GTNNY-EDIAGSDVVIV 80 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE-ECCCH-HHhCCCCEEEE
Confidence 4579999998 9999999999999887 4699999988 6788999998742 1223332 35687 78999999999
Q ss_pred cCCCCCCCCC-----CHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEee-ec
Q 018265 121 PAGVPRKPGM-----TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT-ML 194 (358)
Q Consensus 121 ~ag~~~~~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t-~l 194 (358)
++|.++++|+ +|.+++..|++++++++++|+++||++|+|++|||+|++++++ ++++++|++||+|+| .|
T Consensus 81 tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~di~t~~~----~~~sg~p~~rviGlgt~l 156 (321)
T PTZ00082 81 TAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPLDVMVKLL----QEHSGLPKNKVCGMAGVL 156 (321)
T ss_pred CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHhcCCChhhEEEecCcc
Confidence 9999999999 9999999999999999999999999999999999999998654 688899999999995 99
Q ss_pred cHHHHHHHHHHHhCCCCCCCceEEEEecCCCcccccccccCCCC----------CCChhHHHHHHHHHhcCcceeeeccc
Q 018265 195 DVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----------SLTPTEIDYLTDRIQNGGTEVVEAKT 264 (358)
Q Consensus 195 ds~R~~~~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~----------~~~~~~~~~l~~~v~~~~~~ii~~~~ 264 (358)
|+.|+++.+|+++|+++++|+++|+||||+ ++||+||++++.+ .++++++++|.++++++|++|++.+
T Consensus 157 ds~R~~~~la~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~i~g~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~i~~~~- 234 (321)
T PTZ00082 157 DSSRLRTYIAEKLGVNPRDVHASVIGAHGD-KMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDLL- 234 (321)
T ss_pred cHHHHHHHHHHHhCCCcccceeeEEecCCC-ceEecceeeEECCEEHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhhc-
Confidence 999999999999999999999999999998 9999999998742 1455668899999999999999976
Q ss_pred CCCcccccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 018265 265 GAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAK 342 (358)
Q Consensus 265 gkg~t~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~ 342 (358)
|||+|+||+|.++++++++|++|++ .++|++ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|++|+
T Consensus 235 gkg~t~~~ia~a~~~i~~ail~d~~---~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~sa 310 (321)
T PTZ00082 235 GTGSAYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDIYMGTPAVIGANGVEKIIEL-DLTPEEQKKFDESI 310 (321)
T ss_pred CCCccHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence 6899999999999999999999865 599998 679998 57999999999999999999995 99999999999999
Q ss_pred HHHHHHHH
Q 018265 343 KELAGSIQ 350 (358)
Q Consensus 343 ~~l~~~~~ 350 (358)
+.|++.++
T Consensus 311 ~~i~~~~~ 318 (321)
T PTZ00082 311 KEVKRLEA 318 (321)
T ss_pred HHHHHHHh
Confidence 99998764
No 24
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=1.5e-58 Score=442.11 Aligned_cols=288 Identities=32% Similarity=0.527 Sum_probs=259.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCC----CeEEEEeCCCcHHhhhCCCCEEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTN----AVVRGFLGQQQLEDALTGMDIVII 120 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~----~~v~~~~~t~d~~~al~~aDiVIi 120 (358)
|||+|||+ |.||+.+|+.++..++. +++|+|+++ ..|.++|+.+.... .+++ .++|++ ++++||+||+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~---~t~d~~-~~~~aDiVIi 75 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGIPQGKALDMYEASPVGGFDTKVT---GTNNYA-DTANSDIVVI 75 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCChhHHHHHhhhhhhhccCCCcEEE---ecCCHH-HhCCCCEEEE
Confidence 69999998 99999999999998877 899999977 56788888775421 2233 356875 5899999999
Q ss_pred cCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHH
Q 018265 121 PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRA 199 (358)
Q Consensus 121 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~ 199 (358)
++|.|+++|++|.|++..|++++++++++|.+++|++++|++|||+|++|+++ ++++|+|++||||+ |.|||+|+
T Consensus 76 tag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~di~t~~~----~~~sg~~~~rviG~g~~lds~R~ 151 (305)
T TIGR01763 76 TAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLDAMTYVA----WQKSGFPKERVIGQAGVLDSARF 151 (305)
T ss_pred cCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHEEEeccchHHHHH
Confidence 99999999999999999999999999999999999999999999999998764 78889999999999 58999999
Q ss_pred HHHHHHHhCCCCCCCceEEEEecCCCcccccccccCCCC-C----CChhHHHHHHHHHhcCcceeeecccCCCcccccHH
Q 018265 200 NTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-S----LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMA 274 (358)
Q Consensus 200 ~~~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A 274 (358)
++.+|+++++++++|+++||||||+ +++|+||++++.+ + ++++++++|.++++++|++|++.+ |||+++||+|
T Consensus 152 ~~~la~~l~v~~~~v~~~v~GeHg~-s~~~~wS~~~i~g~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~-~kg~t~~~~a 229 (305)
T TIGR01763 152 RTFIAMELGVSVQDVTACVLGGHGD-AMVPLVRYSTVAGIPVADLISAERIAEIVERTRKGGGEIVNLL-KQGSAYYAPA 229 (305)
T ss_pred HHHHHHHhCcCHHHeeeeEEecCCC-cEEeeeeeeEECCEEHHHhcCHHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHH
Confidence 9999999999999999999999999 8999999998853 2 344458899999999999999976 6889999999
Q ss_pred HHHHHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018265 275 YAAAKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQ 350 (358)
Q Consensus 275 ~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~ 350 (358)
.++++++++|++|++ .++|++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.++
T Consensus 230 ~~~~~i~~ai~~~~~---~v~~~s~~~~~~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~i~~~~~ 303 (305)
T TIGR01763 230 ASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL-KLDQSELALLNKSAKIVDENCK 303 (305)
T ss_pred HHHHHHHHHHhCCCC---eEEEEEEEecccCCCCceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999865 489997 679998 68999999999999999999995 9999999999999999998775
No 25
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=1.1e-57 Score=438.71 Aligned_cols=296 Identities=24% Similarity=0.327 Sum_probs=255.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEE
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIV 118 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~-----el~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiV 118 (358)
||+||||+|+||+++++.|+..++++ +|+|+|+++ ++|+++||.|+.... ...+..+++.+++++|||+|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~-~~~~~~~~~~~~~~~~aDiV 79 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPL-LDGVVPTHDPAVAFTDVDVA 79 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchh-cCceeccCChHHHhCCCCEE
Confidence 69999999999999999999988875 799999954 679999999987311 11122233546899999999
Q ss_pred EEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccH
Q 018265 119 IIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDV 196 (358)
Q Consensus 119 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds 196 (358)
|++||.|+++|++|.+++..|++++++++++|++++ |++++|++|||+|+||+++ ++++++++.++||+ |.||+
T Consensus 80 VitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~~~sg~~~~~vig~gt~LDs 155 (324)
T TIGR01758 80 ILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVL----SNYAPSIPPKNFSALTRLDH 155 (324)
T ss_pred EEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCcceEEEeeehHH
Confidence 999999999999999999999999999999999996 9999999999999998765 67787777789999 89999
Q ss_pred HHHHHHHHHHhCCCCCCCc-eEEEEecCCCcccccccccCCC-C----C----CChhH--HHHHHHHHhcCcceeeeccc
Q 018265 197 VRANTFVAEVLGLDPREVD-VPVVGGHAGVTILPLLSQVKPS-C----S----LTPTE--IDYLTDRIQNGGTEVVEAKT 264 (358)
Q Consensus 197 ~R~~~~lA~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~-~----~----~~~~~--~~~l~~~v~~~~~~ii~~~~ 264 (358)
+||++++|+++|+++++|+ ++||||||+ +++|+||++++. + + +++++ +++|.+++++++++|++.+
T Consensus 156 ~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k- 233 (324)
T TIGR01758 156 NRALAQVAERAGVPVSDVKNVIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRAR- 233 (324)
T ss_pred HHHHHHHHHHhCCChhhceEeEEEECCCC-CcccccccceecCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhcc-
Confidence 9999999999999999995 699999999 999999999886 3 2 22222 5789999999999999964
Q ss_pred CCCcccccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCC-C--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHH
Q 018265 265 GAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVAST-V--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEK 340 (358)
Q Consensus 265 gkg~t~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~-~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~ 340 (358)
++++.||+|.++++++++|+++.+ ++.++|++ +++|+ | +++++||+||++|++|++.+.++ +|+++|+++|++
T Consensus 234 -~~~t~~~ia~~~~~i~~ai~~~~~-~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~el-~L~~~E~~~l~~ 310 (324)
T TIGR01758 234 -KLSSALSAAKAAVDQMHDWVLGTP-EGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGL-CVDDSSRKKLAL 310 (324)
T ss_pred -CCCHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecCC-CCCHHHHHHHHH
Confidence 358999999999999999995433 23599998 56999 8 48999999999997777776665 999999999999
Q ss_pred HHHHHHHHHHHhh
Q 018265 341 AKKELAGSIQKGV 353 (358)
Q Consensus 341 s~~~l~~~~~~~~ 353 (358)
|++.|+++++.++
T Consensus 311 s~~~lk~~~~~~~ 323 (324)
T TIGR01758 311 TAKELEEERDEAL 323 (324)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998874
No 26
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.8e-57 Score=435.67 Aligned_cols=288 Identities=28% Similarity=0.452 Sum_probs=260.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-NAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
|||+|||+ |.||+++++.|+..++..+++|+|++. ..++++|+.|... ....... ++|+ +++++||+||++++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~--~~d~-~~l~~aDiViita~ 76 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY--AGDY-ADCKGADVVVITAG 76 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe--eCCH-HHhCCCCEEEEccC
Confidence 69999998 999999999999999888999999987 6789999998853 1223333 3565 77999999999999
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHHHH
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTF 202 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~~~ 202 (358)
.++++|++|.+++..|+++++++++.|++++|+++++++|||+|++++++ ++++|||++||||+ |.||+.|++++
T Consensus 77 ~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~----~~~sg~p~~~viG~gt~LDs~R~~~~ 152 (308)
T cd05292 77 ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA----YKLSGLPPNRVIGSGTVLDTARFRYL 152 (308)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHeecccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999998765 67789999999999 89999999999
Q ss_pred HHHHhCCCCCCCceEEEEecCCCcccccccccCCCC------------CCChhHHHHHHHHHhcCcceeeecccCCCccc
Q 018265 203 VAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC------------SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSAT 270 (358)
Q Consensus 203 lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~------------~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~ 270 (358)
+|+++++++++|+++|||+||+ +++|+||++++.+ .++++++++|.++++++|++|++. ||+|+
T Consensus 153 la~~~~v~~~~v~~~viGeHg~-~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~---kg~t~ 228 (308)
T cd05292 153 LGEHLGVDPRSVHAYIIGEHGD-SEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIER---KGATY 228 (308)
T ss_pred HHHHhCCCccceeceeeccCCC-cEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHc---CCccH
Confidence 9999999999999999999998 8999999998742 233455889999999999999994 57999
Q ss_pred ccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 018265 271 LSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGS 348 (358)
Q Consensus 271 ~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~ 348 (358)
||+|.++++++++|++|.+ .++|++ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|++|++.|++.
T Consensus 229 ~~~a~a~~~i~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~~-~L~~~E~~~l~~s~~~i~~~ 304 (308)
T cd05292 229 YAIGLALARIVEAILRDEN---SVLTVSSLLDGQYGIKDVALSLPCIVGRSGVERVLPP-PLSEEEEEALRASAEVLKEA 304 (308)
T ss_pred HHHHHHHHHHHHHHHcCCC---cEEEEEEEEcccCCCCCEEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999864 589997 679998 57999999999999999999995 99999999999999999988
Q ss_pred HH
Q 018265 349 IQ 350 (358)
Q Consensus 349 ~~ 350 (358)
++
T Consensus 305 ~~ 306 (308)
T cd05292 305 IE 306 (308)
T ss_pred Hh
Confidence 76
No 27
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1e-57 Score=439.58 Aligned_cols=296 Identities=24% Similarity=0.335 Sum_probs=259.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--NAVVRGFLGQQQLEDALT 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~-----el~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al~ 113 (358)
+|.||+||||+|+||+++++.|+..++++ +|+|+|+++ +.++++|+.|+.. ..+++. +++++++++
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~---~~~~~~~l~ 77 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA---TTDPEEAFK 77 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee---cCCHHHHhC
Confidence 46799999999999999999999988764 999999954 5788999999752 123332 357779999
Q ss_pred CCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHh-CCCCCCcEEEe
Q 018265 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKV-GTYDPKRLLGV 191 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~-~~~p~~kviG~ 191 (358)
|||+||++||.++++|++|.+++..|+++++++++.|++++ |++++|++|||+|++|+++ ++. +++|+++ ||+
T Consensus 78 ~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~~~~~~~~~-ig~ 152 (325)
T cd01336 78 DVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALIL----LKYAPSIPKEN-FTA 152 (325)
T ss_pred CCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH----HHHcCCCCHHH-EEe
Confidence 99999999999999999999999999999999999999997 7999999999999998765 566 5788877 888
Q ss_pred -eeccHHHHHHHHHHHhCCCCCCCc-eEEEEecCCCcccccccccCCC----C-C----CChhH--HHHHHHHHhcCcce
Q 018265 192 -TMLDVVRANTFVAEVLGLDPREVD-VPVVGGHAGVTILPLLSQVKPS----C-S----LTPTE--IDYLTDRIQNGGTE 258 (358)
Q Consensus 192 -t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg~~~~vp~~s~~~v~----~-~----~~~~~--~~~l~~~v~~~~~~ 258 (358)
|.||+.||++++|+++++++++|+ .+||||||+ +++|+||++++. . + +++++ +++|.+++++++++
T Consensus 153 gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~-s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~ 231 (325)
T cd01336 153 LTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAA 231 (325)
T ss_pred eehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC-CeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHH
Confidence 999999999999999999999996 569999999 999999999885 3 1 22222 57999999999999
Q ss_pred eeecccCCCcccccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHH
Q 018265 259 VVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKVRLGRAGIEEIYSLGPLNEYER 335 (358)
Q Consensus 259 ii~~~~gkg~t~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~ 335 (358)
|++.+ +|+++||+|.++++++++|++|++. +.++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+
T Consensus 232 Ii~~~--~g~t~~~~a~~~~~i~~ail~~~~~-~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~~-~L~~~E~ 307 (325)
T cd01336 232 VIKAR--KLSSAMSAAKAICDHVHDWWFGTPE-GEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQGL-SIDDFSR 307 (325)
T ss_pred HHHcc--ccchHHHHHHHHHHHHHHHHcCCCC-CeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecCC-CCCHHHH
Confidence 99964 5799999999999999999998632 3599997 579998 48999999999999999999996 9999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 018265 336 AGLEKAKKELAGSIQKGV 353 (358)
Q Consensus 336 ~~l~~s~~~l~~~~~~~~ 353 (358)
++|++|++.|+++++.++
T Consensus 308 ~~l~~s~~~l~~e~~~~~ 325 (325)
T cd01336 308 EKIDATAKELVEEKETAL 325 (325)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999998764
No 28
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.8e-56 Score=441.69 Aligned_cols=293 Identities=16% Similarity=0.144 Sum_probs=254.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCC-----cEEEEEeCC--C--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLV-----SVLHLYDVV--N--TPGVTADISHMDTN--AVVRGFLGQQQLEDALT 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~-----~el~L~D~~--~--~~g~~~dl~~~~~~--~~v~~~~~t~d~~~al~ 113 (358)
++.||+|+||+|++|+++.+.++..+++ -.|+|+|+. . ++|++|||+|+.+. ..+... +.+ +++++
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~~~-~ea~~ 198 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--TDL-DVAFK 198 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--ECC-HHHhC
Confidence 3579999999999999999999986543 379999994 3 79999999998631 224443 234 69999
Q ss_pred CCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCC--CeEEEEecCCCCccHHHHHHHHHHhC-CCCCCcEEE
Q 018265 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP--KAIVNLISNPVNSTVPIAAEVFKKVG-TYDPKRLLG 190 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~tNP~d~~t~~~~~~~~~~~-~~p~~kviG 190 (358)
|||+||+++|.||++||+|.|++..|++|+++++++|++++| ++++|++|||+|++|+++ ++.+ ++|++||+|
T Consensus 199 daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~----~k~apgiP~~rVig 274 (452)
T cd05295 199 DAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSIL----IKYAPSIPRKNIIA 274 (452)
T ss_pred CCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEE
Confidence 999999999999999999999999999999999999999999 889999999999999775 4555 999999999
Q ss_pred eeeccHHHHHHHHHHHhCCCCCCC-ceEEEEecCCCcccccccccCCCC-------------C----CChhH--HHHHHH
Q 018265 191 VTMLDVVRANTFVAEVLGLDPREV-DVPVVGGHAGVTILPLLSQVKPSC-------------S----LTPTE--IDYLTD 250 (358)
Q Consensus 191 ~t~lds~R~~~~lA~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~-------------~----~~~~~--~~~l~~ 250 (358)
++.+|++|++++||+++|+++++| +++||||||+ ++||+||++++.. + +.+++ .+++.+
T Consensus 275 ~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~-sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~~~ 353 (452)
T cd05295 275 VARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG-NTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEFVA 353 (452)
T ss_pred ecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC-ceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHHHH
Confidence 977889999999999999999999 6799999999 9999999998842 1 22333 257788
Q ss_pred HHhcCcceeeecccCCCcccccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC--CCccEEEEEEEEcCCceEEEccC
Q 018265 251 RIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKVRLGRAGIEEIYSL 327 (358)
Q Consensus 251 ~v~~~~~~ii~~~~gkg~t~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~ 327 (358)
.++++++ + +||+|.||+|.|+++++++|++|++. +.++|++ +++|+| |+|++||+||++|++|++.+.++
T Consensus 354 ~v~~rg~---~---rkgsT~~siA~A~~~iv~ail~~t~~-~~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~~L 426 (452)
T cd05295 354 TLKSLSS---S---LNHEAAISPAHAIATTLSYWYHGSPP-GEIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVTDL 426 (452)
T ss_pred HHHHHHH---h---ccCChHHHHHHHHHHHHHHHHhCCCC-CeEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEeCC
Confidence 8888887 2 46899999999999999999999852 2599997 679998 68999999999999999999995
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhh
Q 018265 328 GPLNEYERAGLEKAKKELAGSIQKGV 353 (358)
Q Consensus 328 ~~L~~~E~~~l~~s~~~l~~~~~~~~ 353 (358)
+|+++|+++|++|+++|++|.+.++
T Consensus 427 -~L~e~E~~kL~~S~~eL~~E~~~~~ 451 (452)
T cd05295 427 -ELSEILREVLKRITSDLIQEKLVAL 451 (452)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999987663
No 29
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=1.3e-55 Score=420.62 Aligned_cols=272 Identities=22% Similarity=0.340 Sum_probs=240.8
Q ss_pred EEEEEeCCC----chhHHHHHhcCCC-C-CeEEEEeCCCcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHH
Q 018265 74 VLHLYDVVN----TPGVTADISHMDT-N-AVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLC 147 (358)
Q Consensus 74 el~L~D~~~----~~g~~~dl~~~~~-~-~~v~~~~~t~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~ 147 (358)
.|+|+|+++ ++|+++||.|+.. . ..++. ++|.+++++|||+||++||.|+++|++|.+++..|++++++++
T Consensus 15 ~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~---~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~ 91 (309)
T PLN00135 15 ILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVA---TTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQA 91 (309)
T ss_pred EEEEecCcccccchhhHHHHHHhhhHHhcCCcEe---cCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 899999876 6899999999863 1 23322 3454588999999999999999999999999999999999999
Q ss_pred HHHHhh-CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHHHHHHHHhCCCCCCC-ceEEEEecCC
Q 018265 148 EGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREV-DVPVVGGHAG 224 (358)
Q Consensus 148 ~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~~~lA~~l~v~~~~v-~~~v~G~hg~ 224 (358)
++|+++ +|++++|++|||+|+||+++ ++.+++|++|+||+ |.||++||++++|+++|+++++| +++||||||+
T Consensus 92 ~~i~~~~~p~aivivvsNPvDv~t~~~----~~~sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~VlGeHG~ 167 (309)
T PLN00135 92 SALEKHAAPDCKVLVVANPANTNALIL----KEFAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSS 167 (309)
T ss_pred HHHHHhcCCCeEEEEeCCcHHHHHHHH----HHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEEEEcCCC
Confidence 999996 89999999999999998765 67889999999999 89999999999999999999999 7999999999
Q ss_pred CcccccccccCC----CC-C----CChhH--HHHHHHHHhcCcceeeecccCCCcccccHHHHHHHHHHHHHccCCCCCc
Q 018265 225 VTILPLLSQVKP----SC-S----LTPTE--IDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAG 293 (358)
Q Consensus 225 ~~~vp~~s~~~v----~~-~----~~~~~--~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A~ai~~ii~ai~~~~~~~~~ 293 (358)
+++|+||++++ ++ + +.+++ .++|.++++++|++|++.+ ||+|+||+|.++++++++|+++++ ++.
T Consensus 168 -s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~--kg~t~~~ia~a~~~iv~ai~~~~~-~~~ 243 (309)
T PLN00135 168 -TQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKAR--KLSSALSAASSACDHIRDWVLGTP-EGT 243 (309)
T ss_pred -ceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHcc--CccHHHHHHHHHHHHHHHHHhCCc-CCe
Confidence 99999999988 42 1 23333 5789999999999999963 579999999999999999999642 235
Q ss_pred EEEee-EEeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 018265 294 VIECA-YVASTV--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 357 (358)
Q Consensus 294 v~~~s-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~ 357 (358)
++|++ +++|+| +++++||+||++|++|++.+.++ +|+++|+++|++|++.|+++++++++.|+
T Consensus 244 v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~l-~L~~~E~~~l~~S~~~lk~~~~~~~~~~~ 309 (309)
T PLN00135 244 WVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGL-SIDEFSRKKMDATAKELKEEKELAYSCLS 309 (309)
T ss_pred EEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99997 579998 48999999999999999999896 99999999999999999999999988763
No 30
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=3.1e-55 Score=420.21 Aligned_cols=291 Identities=26% Similarity=0.439 Sum_probs=257.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC----chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCCEEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT--NAVVRGFLGQQQLEDALTGMDIVII 120 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~----~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al~~aDiVIi 120 (358)
|||+|+||+|.+|++++..++..++..+|+|+|+++ +++.++|+.|... ....+.. .++|+ +++++||+||+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~-~~~d~-~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIK-ISSDL-SDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEE-ECCCH-HHhCCCCEEEE
Confidence 699999988999999999999999988999999954 6788999998632 1222332 24565 67999999999
Q ss_pred cCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHH
Q 018265 121 PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRA 199 (358)
Q Consensus 121 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~ 199 (358)
++|.|+++|++|.+++..|+++++++++.|.+++|++++|+++||+|++|+++ ++.+++|++|+||+ |.||++|+
T Consensus 79 tag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd~~t~~~----~~~~g~~~~~viG~gt~LDs~R~ 154 (309)
T cd05294 79 TAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVDVMTYKA----LKESGFDKNRVFGLGTHLDSLRF 154 (309)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHhcCCCHHHEeeccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999998764 67889999999999 79999999
Q ss_pred HHHHHHHhCCCCCCCceEEEEecCCCcccccccccCCCC-C------CChhHHHHHHHHHhcCcceeeecccCCCccccc
Q 018265 200 NTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-S------LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLS 272 (358)
Q Consensus 200 ~~~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~------~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s 272 (358)
+++||+++++++++|+++|+||||+ +++|+||++++.+ + +.+.+++++.++++++|++|++. ||++.||
T Consensus 155 ~~~la~~l~v~~~~v~~~viGeHg~-s~~~~~S~~~i~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~---kg~t~~~ 230 (309)
T cd05294 155 KVAIAKHFNVHISEVHTRIIGEHGD-SMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISL---KGGSEYG 230 (309)
T ss_pred HHHHHHHHCcChHHeEEEEEecCCC-ceEeeeeecEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHh---cCCchhh
Confidence 9999999999999999999999999 8999999998853 1 22445789999999999999995 4678899
Q ss_pred HHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018265 273 MAYAAAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSI 349 (358)
Q Consensus 273 ~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~ 349 (358)
+|.++++++++|++|++ .++|++ +++|+| .+++++|+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus 231 ~a~~~~~ii~ail~~~~---~v~~vsv~~~g~~~~~~~~~~svP~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~i~~~~ 306 (309)
T cd05294 231 PASAISNLVRTIANDER---RILTVSTYLEGEIDGIRDVCIGVPVKLGKNGIEEIVPI-EMDDDEREAFRKSAEIVKKYT 306 (309)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEEEEECCccCCCCCeEEEeEEEEcCCccEEEeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999875 488887 568886 34899999999999999999995 999999999999999999876
Q ss_pred HH
Q 018265 350 QK 351 (358)
Q Consensus 350 ~~ 351 (358)
+.
T Consensus 307 ~~ 308 (309)
T cd05294 307 RE 308 (309)
T ss_pred hc
Confidence 53
No 31
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=2.7e-55 Score=419.56 Aligned_cols=287 Identities=34% Similarity=0.592 Sum_probs=256.5
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCCEEEEcCCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--NAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al~~aDiVIi~ag~ 124 (358)
|+|||| |.||+.++..++..++. +|+|+|+++ +.+.++|+.+... ....+.. .++|+ ++++|||+||+++|.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~-~t~d~-~~l~dADiVIit~g~ 76 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGKALDISQAAPILGSDTKVT-GTNDY-EDIAGSDVVVITAGI 76 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEE-EcCCH-HHhCCCCEEEEecCC
Confidence 689999 99999999999998887 999999988 5778888887642 1222332 34675 679999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEee-eccHHHHHHHH
Q 018265 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT-MLDVVRANTFV 203 (358)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t-~lds~R~~~~l 203 (358)
|+++|++|.+++.+|++++++++++|++++|++++|++|||+|++|+++ ++++++|++||+|+| .||++|++.++
T Consensus 77 p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP~di~t~~~----~~~s~~~~~rviGlgt~lds~r~~~~l 152 (300)
T cd01339 77 PRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLDVMTYVA----YKASGFPRNRVIGMAGVLDSARFRYFI 152 (300)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCHHHEEEecchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998765 678899999999995 89999999999
Q ss_pred HHHhCCCCCCCceEEEEecCCCcccccccccCCCC-C----CChhHHHHHHHHHhcCcceeeecccCCCcccccHHHHHH
Q 018265 204 AEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-S----LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAA 278 (358)
Q Consensus 204 A~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A~ai~ 278 (358)
|+++++++++|+++|+|+||+ +++|+||++++.. + +++++++++.+++++++++|++.| |||+++||+|.+++
T Consensus 153 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~~~~ii~~k-~~g~t~~~~a~~~~ 230 (300)
T cd01339 153 AEELGVSVKDVQAMVLGGHGD-TMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAAIA 230 (300)
T ss_pred HHHhCCCccceEEEEEeCCCC-cceecceecEECCEEHHHhcChHHHHHHHHHHHHHHHHHHhhc-CCCchhHHHHHHHH
Confidence 999999999999999999998 8999999998853 2 344568899999999999999977 67999999999999
Q ss_pred HHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018265 279 KFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSI 349 (358)
Q Consensus 279 ~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~ 349 (358)
+++++|++|++ .++|++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus 231 ~i~~ail~~~~---~i~~~s~~~~g~yg~~~~~~s~P~~ig~~G~~~~~~l-~l~~~E~~~l~~s~~~l~~~~ 299 (300)
T cd01339 231 EMVEAILKDKK---RVLPCSAYLEGEYGIKDIFVGVPVVLGKNGVEKIIEL-DLTDEEKEAFDKSVESVKELI 299 (300)
T ss_pred HHHHHHHcCCC---cEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHh
Confidence 99999999864 599998 679998 56999999999999999999995 999999999999999999765
No 32
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=5.1e-55 Score=418.95 Aligned_cols=292 Identities=33% Similarity=0.585 Sum_probs=260.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCC--CeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTN--AVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~--~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
++||+|||| |+||++++..++..++. +|+|+|+++ +++.++|+.+.... ...+.. .++|+ +++++||+||++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~-~~~d~-~~~~~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKIT-GTNDY-EDIAGSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEEE-eCCCH-HHHCCCCEEEEC
Confidence 479999999 99999999999998877 999999987 67888898876421 122322 34676 679999999999
Q ss_pred CCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHH
Q 018265 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRAN 200 (358)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~ 200 (358)
+|.|+++|++|.+++.+|++++++++++|++++|++|+|++|||+|++|+++ ++++++|++||||+ |.||++||+
T Consensus 78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~----~~~s~~~~~~viG~gt~lds~r~~ 153 (307)
T PRK06223 78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVA----LKESGFPKNRVIGMAGVLDSARFR 153 (307)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCcccEEEeCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999998765 67889999999999 599999999
Q ss_pred HHHHHHhCCCCCCCceEEEEecCCCcccccccccCCCC-C----CChhHHHHHHHHHhcCcceeeecccCCCcccccHHH
Q 018265 201 TFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-S----LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAY 275 (358)
Q Consensus 201 ~~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~-~----~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A~ 275 (358)
+.||+++++++++|+++|+|+||+ +++|+||.+++.. + ++++.+++|.++++++++++++.+ +|+++.|++|.
T Consensus 154 ~~la~~l~v~~~~v~~~viGehg~-s~~p~~S~~~v~g~~~~~~~~~~~~~~l~~~v~~~~~~ii~~~-~kg~t~~~~A~ 231 (307)
T PRK06223 154 TFIAEELNVSVKDVTAFVLGGHGD-SMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAPAA 231 (307)
T ss_pred HHHHHHhCcChhhCcccEEcCCCC-cceEchhhCEECCEEHHHhCChHHHHHHHHHHHHHHHHHHhhc-ccCChhHHHHH
Confidence 999999999999999999999998 9999999998742 2 444557899999999999999974 56899999999
Q ss_pred HHHHHHHHHHccCCCCCcEEEee-EEeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018265 276 AAAKFADACLRGLRGDAGVIECA-YVASTV-TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 351 (358)
Q Consensus 276 ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~-~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~ 351 (358)
++++++++|+.|++ .++|++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++|++.|++.++.
T Consensus 232 ~~~~ii~ail~~~~---~~~~~~v~~~g~yg~~~~~~s~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~ 305 (307)
T PRK06223 232 SIAEMVEAILKDKK---RVLPCSAYLEGEYGVKDVYVGVPVKLGKNGVEKIIEL-ELDDEEKAAFDKSVEAVKKLIEA 305 (307)
T ss_pred HHHHHHHHHHcCCC---cEEEEEEEecCcCCCCCeEEEeEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999864 488887 678888 57999999999999999999995 99999999999999999988864
No 33
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=1.2e-54 Score=414.89 Aligned_cols=273 Identities=21% Similarity=0.264 Sum_probs=236.7
Q ss_pred EEEEEeCCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHH
Q 018265 74 VLHLYDVVN----TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEG 149 (358)
Q Consensus 74 el~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~ 149 (358)
.|+|+|+++ ++|+++||.|+. .+..+....++|++++++|||+||++||.|+++|++|.+++..|++++++++++
T Consensus 17 ~l~L~D~~~~~~~a~g~a~Dl~d~~-~~~~~~~i~~~~~~~~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~~~i~~~ 95 (313)
T TIGR01756 17 CLHLLEIPPALNRLEALAMELEDCA-FPNLAGTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGEA 95 (313)
T ss_pred EEEEecCCCccchhHhHHHHHHHhc-cccCCceEecCCHHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHH
Confidence 899999976 689999999997 232211112467778999999999999999999999999999999999999999
Q ss_pred HHhhCC-CeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eeccHHHHHHHHHHHhCCCCCCCce-EEEEecCCCc
Q 018265 150 IAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDV-PVVGGHAGVT 226 (358)
Q Consensus 150 i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~lds~R~~~~lA~~l~v~~~~v~~-~v~G~hg~~~ 226 (358)
|++++| ++++|++|||+|++|++++ ++.+|+|++ +||+ |.||++||++++|+++++++++|+. +||||||+ +
T Consensus 96 i~~~a~~~~ivivvtNPvDv~t~v~~---~~~sg~p~~-vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V~GeHG~-s 170 (313)
T TIGR01756 96 LSEYAKPTVKVLVIGNPVNTNCLVAM---LHAPKLSAE-NFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHAE-S 170 (313)
T ss_pred HHhhCCCCeEEEEeCCchHHHHHHHH---HHcCCCCHH-HEEecccHHHHHHHHHHHHHhCcChhheeeeEEEECCCC-c
Confidence 999995 5889999999999987652 588999998 9999 8999999999999999999999965 59999999 9
Q ss_pred ccccccccCC--CC-C------CChh-HHHHHHHHHhcCcceeeecccCCCcccccHH-HHHHHHHHHHHccCCCCCcEE
Q 018265 227 ILPLLSQVKP--SC-S------LTPT-EIDYLTDRIQNGGTEVVEAKTGAGSATLSMA-YAAAKFADACLRGLRGDAGVI 295 (358)
Q Consensus 227 ~vp~~s~~~v--~~-~------~~~~-~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A-~ai~~ii~ai~~~~~~~~~v~ 295 (358)
++|+||++++ .+ + ++++ .++++.++++++|++|++. ||+|+|+++ .++++++++|++|++. +.++
T Consensus 171 ~vp~~S~~~V~~~G~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~---kg~t~~~~~a~ai~~iv~ail~~~~~-~~i~ 246 (313)
T TIGR01756 171 MVADLTHAEFTKNGKHQKVFDELCRDYPEPDFFEVIAQRAWKILEM---RGFTSAASPVKASLQHMKAWLFGTRP-GEVL 246 (313)
T ss_pred eeecccccEEecCCeehhHhhhcCcHhHHHHHHHHHHHHHHHHHhC---cCCcchHHHHHHHHHHHHHHhcCCCC-CeEE
Confidence 9999999988 43 1 2221 3578999999999999994 579999977 6999999999997653 3599
Q ss_pred Eee-EEe-C-CC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018265 296 ECA-YVA-S-TV--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 356 (358)
Q Consensus 296 ~~s-~~~-g-~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~ 356 (358)
|++ +++ + +| ++|+++|+||++|++|++++++.++|+++|+++|++|++.|++|.+.+++.|
T Consensus 247 pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l~L~~~E~~~l~~Sa~~l~~e~~~~~~~~ 312 (313)
T TIGR01756 247 SMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENFELNPWLKTKLAQTEKDLFEERETALKAL 312 (313)
T ss_pred EEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 998 465 3 88 3799999999999999999999339999999999999999999999988764
No 34
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=9.7e-51 Score=381.28 Aligned_cols=254 Identities=29% Similarity=0.452 Sum_probs=229.8
Q ss_pred EEEEcCCCchHHHHHHHHHhCC--CCcEEEEEeCCC--chhHHHHHhcCCCCC-eEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINP--LVSVLHLYDVVN--TPGVTADISHMDTNA-VVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~--~~~el~L~D~~~--~~g~~~dl~~~~~~~-~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
|+||||+|.+|+++++.|+..+ ...+|+|+|+++ +++.++|++|..... ..+.. .++|++++++|||+||+++|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~-~~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS-ITDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE-ECCchHHHhCCCCEEEECCC
Confidence 6899998999999999999988 778999999987 788999999885432 23333 36788899999999999999
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEeeeccHHHHHHHH
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFV 203 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~lds~R~~~~l 203 (358)
.++++|++|.+++.+|++++++++++|+++||++|+|++|||+|++|+++ ++++|+|++|+||+|.+|+.|+++++
T Consensus 80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~----~~~sg~~~~kviG~~~ld~~r~~~~l 155 (263)
T cd00650 80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLV----WRYSGLPKEKVIGLGTLDPIRFRRIL 155 (263)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCchhEEEeecchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998764 77889999999999559999999999
Q ss_pred HHHhCCCCCCCceEEEEecCCCcccccccccCCCCCCChhHHHHHHHHHhcCcceeeecccCCCcccccHHHHHHHHHHH
Q 018265 204 AEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADA 283 (358)
Q Consensus 204 A~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~~~~ii~~~~gkg~t~~s~A~ai~~ii~a 283 (358)
|+++++++++|+++|||+||+ +++|+||+++ +|.++++++++
T Consensus 156 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~-------------------------------------~a~~~~~ii~a 197 (263)
T cd00650 156 AEKLGVDPDDVKVYILGEHGG-SQVPDWSTVR-------------------------------------IATSIADLIRS 197 (263)
T ss_pred HHHhCCCccceEEEEEEcCCC-ceEeccccch-------------------------------------HHHHHHHHHHH
Confidence 999999999999999999998 8999999864 67899999999
Q ss_pred HHccCCCCCcEEEee-EEeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018265 284 CLRGLRGDAGVIECA-YVASTV--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSI 349 (358)
Q Consensus 284 i~~~~~~~~~v~~~s-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~ 349 (358)
|++|++ .++|++ +++|+| +++++||+||++|++|+++++++ +|+++|+++|+++++.++..+
T Consensus 198 i~~~~~---~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~~-~l~~~e~~~l~~s~~~~~~~~ 262 (263)
T cd00650 198 LLNDEG---EILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEV-GLTDFELEKLQKSADTLKKEL 262 (263)
T ss_pred HHcCCC---EEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999854 588887 568988 58999999999999999999995 999999999999999998765
No 35
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=4.3e-50 Score=357.62 Aligned_cols=305 Identities=24% Similarity=0.351 Sum_probs=274.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCC-----CCcEEEEEeCCC----chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVN----TPGVTADISHMDTNAVVRGFLGQQQLEDALTG 114 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~-----~~~el~L~D~~~----~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~ 114 (358)
+++.+|.|+||+|++|+++.+.++... ....++|+|+.. ++|..|+|+|+.. |.++.+..++|..++|+|
T Consensus 2 ~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~-PlL~~Vvattd~~~afkd 80 (332)
T KOG1496|consen 2 KEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCAL-PLLKGVVATTDEVEAFKD 80 (332)
T ss_pred CCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhh-hHHHhhhcccChhhhhcc
Confidence 356799999999999999999998642 235899999987 6899999999974 676666567899999999
Q ss_pred CCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEeee
Q 018265 115 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTM 193 (358)
Q Consensus 115 aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~ 193 (358)
.|+.|+.+++||++||+|.|++..|.+|+++.++++++|+ |+++|+++.||+|.++.++. +.++.+|.+++-++|.
T Consensus 81 v~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~---k~ApsIP~kNfs~lTR 157 (332)
T KOG1496|consen 81 VDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILK---KFAPSIPEKNFSALTR 157 (332)
T ss_pred CcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHh---hhCCCCchhcchhhhh
Confidence 9999999999999999999999999999999999999998 89999999999999987764 5678999999999999
Q ss_pred ccHHHHHHHHHHHhCCCCCCC-ceEEEEecCCCcccccccccCCCC---------CCChhHH--HHHHHHHhcCcceeee
Q 018265 194 LDVVRANTFVAEVLGLDPREV-DVPVVGGHAGVTILPLLSQVKPSC---------SLTPTEI--DYLTDRIQNGGTEVVE 261 (358)
Q Consensus 194 lds~R~~~~lA~~l~v~~~~v-~~~v~G~hg~~~~vp~~s~~~v~~---------~~~~~~~--~~l~~~v~~~~~~ii~ 261 (358)
||++|+..++|.++||+.++| ++.+||+|+. +++|+..++++.. -+.|..| .+|.+.|++||.-+|+
T Consensus 158 LDhNRA~~QlA~klgv~~~~VkNviIWGNHSs-TQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~ 236 (332)
T KOG1496|consen 158 LDHNRALAQLALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIK 236 (332)
T ss_pred hchhhHHHHHHHhhCCchhhcceeEEeccccc-ccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhh
Confidence 999999999999999999999 7999999998 9999999998842 1456666 5899999999999999
Q ss_pred cccCCCcccccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHH
Q 018265 262 AKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGL 338 (358)
Q Consensus 262 ~~~gkg~t~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~--~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l 338 (358)
.+ |-|+.+|.|.+++++|+.|+.++++.. +++++ +.+|.| |++..||+||++ ++|-|++++..+++++-++++
T Consensus 237 ar--k~SSA~SaA~aacDhi~dw~~gTpeG~-fvSmgV~sDGsYgip~gli~SfPv~~-k~g~wkiVqgl~iddf~r~km 312 (332)
T KOG1496|consen 237 AR--KLSSAMSAAKAACDHIRDWWFGTPEGT-FVSMGVYSDGSYGIPDGLIFSFPVTI-KNGDWKIVQGLPIDDFSREKM 312 (332)
T ss_pred hh--hhhhhhhHHHhHhhhhhheecCCCCcc-EEEEeeecCCCCCCCCCeEEEcceEe-cCCceEEEcCcchhHHHHHhh
Confidence 76 568899999999999999999998654 66775 679998 899999999999 789999999889999999999
Q ss_pred HHHHHHHHHHHHHhhhhhh
Q 018265 339 EKAKKELAGSIQKGVSFVR 357 (358)
Q Consensus 339 ~~s~~~l~~~~~~~~~~~~ 357 (358)
..++++|+++.+.++.+++
T Consensus 313 ~~t~~EL~eEkd~a~~~l~ 331 (332)
T KOG1496|consen 313 DLTAKELKEEKDLAYSCLS 331 (332)
T ss_pred hhhHHHHHHhHHHHHHhhc
Confidence 9999999999999998775
No 36
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=100.00 E-value=2.3e-33 Score=247.87 Aligned_cols=159 Identities=36% Similarity=0.582 Sum_probs=144.6
Q ss_pred eeccHHHHHHHHHHHhCCCCCCCceEEEEecCCCcccccccccCCC-----------CCCChhHHHHHHHHHhcCcceee
Q 018265 192 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPS-----------CSLTPTEIDYLTDRIQNGGTEVV 260 (358)
Q Consensus 192 t~lds~R~~~~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~-----------~~~~~~~~~~l~~~v~~~~~~ii 260 (358)
|.||++||++++|+++|++|++++++||||||+ ++||+||++++. ..++++++++|.++++++|++|+
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~ViGeHg~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii 79 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAYVIGEHGD-SQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII 79 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEEEEBSSST-TEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEEEEecCCc-ceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence 679999999999999999999999999999999 999999999874 13566778999999999999999
Q ss_pred ecccCCCcccccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC--CCc-cEEEEEEEEcCCceEEEccCCCCCHHHHH
Q 018265 261 EAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV--TEL-PFFASKVRLGRAGIEEIYSLGPLNEYERA 336 (358)
Q Consensus 261 ~~~~gkg~t~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~--~~~-~~~svPv~ig~~Gv~~i~~~~~L~~~E~~ 336 (358)
+.|. |+++||+|.++++++++|++|++ .++|++ +++|+| +++ +|||+||++|++|+++++++++|+++|++
T Consensus 80 ~~k~--g~t~~s~A~a~~~~v~ail~~~~---~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~ 154 (174)
T PF02866_consen 80 KAKG--GSTSYSIAAAAARIVEAILKDER---RILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQE 154 (174)
T ss_dssp HHHS--SSCHHHHHHHHHHHHHHHHTTHT---EEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHHH
T ss_pred eecc--ccCcCCHHHHHHHHHHHHhhccc---ccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHHH
Confidence 9763 89999999999999999999974 588887 679998 334 99999999999999999994499999999
Q ss_pred HHHHHHHHHHHHHHHhhhhh
Q 018265 337 GLEKAKKELAGSIQKGVSFV 356 (358)
Q Consensus 337 ~l~~s~~~l~~~~~~~~~~~ 356 (358)
+|++|++.|+++++++++|+
T Consensus 155 ~l~~sa~~l~~~i~~~~~f~ 174 (174)
T PF02866_consen 155 KLKESAKELKKEIEKGLEFV 174 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999986
No 37
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=100.00 E-value=9.2e-33 Score=235.78 Aligned_cols=139 Identities=39% Similarity=0.620 Sum_probs=123.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~ 124 (358)
|||+||||+|.||+++++.|+++++.+||+|+|+++ ++|+++||+|+.............+ +++++|||+||+++|.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-~~~~~~aDivvitag~ 79 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-YEALKDADIVVITAGV 79 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-GGGGTTESEEEETTST
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-ccccccccEEEEeccc
Confidence 799999999999999999999999999999999996 8999999999865332222222344 5889999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEE
Q 018265 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 190 (358)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG 190 (358)
|+++|++|.+++..|++++++++++|++++|+++++++|||+|++|++ +++.+++|++|+||
T Consensus 80 ~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd~~t~~----~~~~s~~~~~kviG 141 (141)
T PF00056_consen 80 PRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVDVMTYV----AQKYSGFPPNKVIG 141 (141)
T ss_dssp SSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHHHHHHH----HHHHHTSSGGGEEE
T ss_pred cccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHHHHHHH----HHHhhCcCcccCcC
Confidence 999999999999999999999999999999999999999999999765 47889999999998
No 38
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=99.97 E-value=2.5e-30 Score=256.99 Aligned_cols=279 Identities=20% Similarity=0.222 Sum_probs=190.1
Q ss_pred CEEEEEcCCCchHHHHHHHH----HhC--CC-CcEEEEEeCCC-ch----hHHHHHhcCCCCCeEEEEeCCCcHHhhhCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLM----KIN--PL-VSVLHLYDVVN-TP----GVTADISHMDTNAVVRGFLGQQQLEDALTG 114 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l----~~~--~~-~~el~L~D~~~-~~----g~~~dl~~~~~~~~v~~~~~t~d~~~al~~ 114 (358)
|||+|||| |+ +.++.| +.. .+ .+||+|+|+++ .. ..+..+.+.. ...++.. .|+|+++|++|
T Consensus 1 ~KI~iIGg-GS---~~tp~li~~l~~~~~~l~~~ei~L~Did~~Rl~~v~~l~~~~~~~~-g~~~~v~-~ttD~~~Al~g 74 (425)
T cd05197 1 VKIAIIGG-GS---SFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRYVEEV-GADIKFE-KTMDLEDAIID 74 (425)
T ss_pred CEEEEECC-ch---HhHHHHHHHHHcChhhCCCCEEEEEcCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCC
Confidence 69999999 84 455444 333 23 58999999997 21 2222333221 2345543 47899999999
Q ss_pred CCEEEEcC---CC---------CCCCCC--------CHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHH
Q 018265 115 MDIVIIPA---GV---------PRKPGM--------TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 174 (358)
Q Consensus 115 aDiVIi~a---g~---------~~~~g~--------~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~ 174 (358)
|||||.+. |. |.++|. .......+|+++++++++.|+++||+||+||+|||+|++|+++
T Consensus 75 ADfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P~a~lin~TNP~di~t~a~- 153 (425)
T cd05197 75 ADFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSPDAWYLNFTNPAGEVTEAV- 153 (425)
T ss_pred CCEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHH-
Confidence 99999974 32 334432 2567789999999999999999999999999999999998764
Q ss_pred HHHHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE-ecCCCcccccccccCC-----------------
Q 018265 175 EVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-GHAGVTILPLLSQVKP----------------- 236 (358)
Q Consensus 175 ~~~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G-~hg~~~~vp~~s~~~v----------------- 236 (358)
++. +|+.||||+|.. +.|+++.+|+.+|+++++|+++++| ||+. .||..++
T Consensus 154 ---~~~--~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v~GlnHg~-----~~s~~~~~G~~l~p~l~~~~~~~~ 222 (425)
T cd05197 154 ---RRY--VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQYAGLNHGI-----WLNRVRYNGGDVTPKLDEWVEEKS 222 (425)
T ss_pred ---HHh--CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEEEeccCeE-----eeEeEEECCeecHHHHHHHHhccC
Confidence 565 478899999877 8999999999999999999999999 9974 2222110
Q ss_pred ---------------------------CCC------CC----h-------------hH---H-HHHHHHHhcC--cceee
Q 018265 237 ---------------------------SCS------LT----P-------------TE---I-DYLTDRIQNG--GTEVV 260 (358)
Q Consensus 237 ---------------------------~~~------~~----~-------------~~---~-~~l~~~v~~~--~~~ii 260 (358)
+.. +. + ++ + +++.+..+.. ....-
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~ 302 (425)
T cd05197 223 KDWKTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSVV 302 (425)
T ss_pred ccccccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCChh
Confidence 000 00 0 00 0 1122222110 00000
Q ss_pred ecccCCCcccccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHH
Q 018265 261 EAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV---TELPFFASKVRLGRAGIEEIYSLGPLNEYERA 336 (358)
Q Consensus 261 ~~~~gkg~t~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~ 336 (358)
+.. .++...|+ ..++++++||++|++. ++.+. -++|.+ |+|.++++||+++++|+.++.. ++|++..++
T Consensus 303 ~~~-~r~~~~~~--e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~~ 375 (425)
T cd05197 303 ELI-KRGGRKYS--EAAIPLIRALLNDNGA---RFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVKG 375 (425)
T ss_pred hhh-hcCCcccH--HHHHHHHHHHHcCCCe---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHHH
Confidence 000 11233344 7899999999998763 44444 356765 8899999999999999999876 699998888
Q ss_pred HHHHHHHHHHHHHH
Q 018265 337 GLEKAKKELAGSIQ 350 (358)
Q Consensus 337 ~l~~s~~~l~~~~~ 350 (358)
+++.-...-+-.++
T Consensus 376 Li~~~~~~e~l~ve 389 (425)
T cd05197 376 LLRQRKMRERLALE 389 (425)
T ss_pred HHHHHHHHHHHHHH
Confidence 77765444333333
No 39
>PRK15076 alpha-galactosidase; Provisional
Probab=99.97 E-value=1.1e-30 Score=260.41 Aligned_cols=289 Identities=18% Similarity=0.173 Sum_probs=194.6
Q ss_pred CCEEEEEcCCCchHHHHHH--HHH-hCCCC-cEEEEEeCCC--ch-hHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAM--LMK-INPLV-SVLHLYDVVN--TP-GVTADISHMD--TNAVVRGFLGQQQLEDALTGMD 116 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~--~l~-~~~~~-~el~L~D~~~--~~-g~~~dl~~~~--~~~~v~~~~~t~d~~~al~~aD 116 (358)
++||+|||| |++|++.++ .++ ..++. .||+|+|+++ ++ +..+ +.+.. .....+.. .++|+++|++|||
T Consensus 1 ~~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l-~~~~~~~~~~~~~i~-~ttD~~eal~dAD 77 (431)
T PRK15076 1 MPKITFIGA-GSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIV-ARKLAESLGASAKIT-ATTDRREALQGAD 77 (431)
T ss_pred CcEEEEECC-CHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHH-HHHHHHhcCCCeEEE-EECCHHHHhCCCC
Confidence 369999998 999999877 665 34554 4999999987 22 3333 33321 12233433 3679889999999
Q ss_pred EEEEcCCCC-CCCC--------------CCHHhH--------HHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHH
Q 018265 117 IVIIPAGVP-RKPG--------------MTRDDL--------FNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIA 173 (358)
Q Consensus 117 iVIi~ag~~-~~~g--------------~~r~~~--------~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~ 173 (358)
|||++++.+ ++++ ++|.+. +.+|++++++++++|+++||++|+|++|||+|++|+.+
T Consensus 78 fVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p~a~iin~tNP~divt~~~ 157 (431)
T PRK15076 78 YVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCPDALLLNYVNPMAMNTWAM 157 (431)
T ss_pred EEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH
Confidence 999998876 3434 455566 89999999999999999999999999999999998653
Q ss_pred HHHHHHhCCCCCCcEEEee--eccHHHHHHHHHHHhCCCCCCCceEEEE-ecCC---------Ccccccccc---c----
Q 018265 174 AEVFKKVGTYDPKRLLGVT--MLDVVRANTFVAEVLGLDPREVDVPVVG-GHAG---------VTILPLLSQ---V---- 234 (358)
Q Consensus 174 ~~~~~~~~~~p~~kviG~t--~lds~R~~~~lA~~l~v~~~~v~~~v~G-~hg~---------~~~vp~~s~---~---- 234 (358)
+ ++|+.||||+| .+++. +.+|+.+|+++++|++++.| ||.. ++.+|.... .
T Consensus 158 ----~---~~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~~GlNH~~W~~~~~~~G~D~~p~l~~~~~~~~~~ 227 (431)
T PRK15076 158 ----N---RYPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRCAGINHMAWYLELERKGEDLYPELRAAAAEGQTR 227 (431)
T ss_pred ----h---cCCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEEEeecchhhheeeeECCcchHHHHHHHHhccCch
Confidence 3 67889999998 36653 88999999999999999999 4433 234442110 0
Q ss_pred ---CCC-----------C-----------CC----ChhHHHHHHH---HHhcCcce-------ee-ecccCCCcccccHH
Q 018265 235 ---KPS-----------C-----------SL----TPTEIDYLTD---RIQNGGTE-------VV-EAKTGAGSATLSMA 274 (358)
Q Consensus 235 ---~v~-----------~-----------~~----~~~~~~~l~~---~v~~~~~~-------ii-~~~~gkg~t~~s~A 274 (358)
.++ . .+ .++..+++.. ...+++.+ .+ +.++++..-.-..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (431)
T PRK15076 228 CQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELANAERIEIKRSR 307 (431)
T ss_pred hcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhCCCccccccch
Confidence 000 0 01 1222222111 00011111 10 11111100001134
Q ss_pred HHHHHHHHHHHccCCCCCcEEEeeE-EeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018265 275 YAAAKFADACLRGLRGDAGVIECAY-VASTV---TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQ 350 (358)
Q Consensus 275 ~ai~~ii~ai~~~~~~~~~v~~~s~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~ 350 (358)
..+++++++|.+|.+. ++.+++ .+|.+ |+|.++++||.++++|+.++.. ++|++..+++++.-...=+-.++
T Consensus 308 e~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~~~~~e~l~ve 383 (431)
T PRK15076 308 EYASTIIEAIETGEPS---VIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRTNINVQELTVE 383 (431)
T ss_pred HHHHHHHHHHhcCCce---EEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999998762 554544 46765 8899999999999999999877 69999999987765544443444
Q ss_pred H
Q 018265 351 K 351 (358)
Q Consensus 351 ~ 351 (358)
.
T Consensus 384 A 384 (431)
T PRK15076 384 A 384 (431)
T ss_pred H
Confidence 3
No 40
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=99.97 E-value=5.5e-30 Score=254.11 Aligned_cols=281 Identities=17% Similarity=0.190 Sum_probs=188.3
Q ss_pred CEEEEEcCCCchHH-HHHHHHHhC-C-C-CcEEEEEeCC-C-ch----hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCC
Q 018265 47 FKVAVLGAAGGIGQ-PLAMLMKIN-P-L-VSVLHLYDVV-N-TP----GVTADISHMDTNAVVRGFLGQQQLEDALTGMD 116 (358)
Q Consensus 47 ~KI~IiGa~G~vG~-~~a~~l~~~-~-~-~~el~L~D~~-~-~~----g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aD 116 (358)
|||+|||| |++-. .+...|+.. . + .+||+|+|++ + .. ..+..+.+.. .+.++.. .|+|+++|++|||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~~-~~~~~v~-~t~d~~~al~gad 77 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKKA-GLPIKVH-LTTDRREALEGAD 77 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCCCC
Confidence 69999999 75311 122233432 2 3 5899999999 5 11 1122222221 2344443 4689999999999
Q ss_pred EEEEcCCCCCCCCCC--------------------HHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHH
Q 018265 117 IVIIPAGVPRKPGMT--------------------RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEV 176 (358)
Q Consensus 117 iVIi~ag~~~~~g~~--------------------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~ 176 (358)
|||++.+.+..++++ ....+.+|++++++++++|+++|||||+|++|||+|++|+++
T Consensus 78 fVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TNP~~ivt~a~--- 154 (419)
T cd05296 78 FVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTNPAGIVTEAV--- 154 (419)
T ss_pred EEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH---
Confidence 999987765444333 344588999999999999999999999999999999997654
Q ss_pred HHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE-ecCC---------Cccccc----------------
Q 018265 177 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-GHAG---------VTILPL---------------- 230 (358)
Q Consensus 177 ~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G-~hg~---------~~~vp~---------------- 230 (358)
++.+ +.|+||+|+.+ .|+++.+|+.+|+++++++++++| ||.. ++.+|.
T Consensus 155 -~k~~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~~ 229 (419)
T cd05296 155 -LRHT---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDYAGLNHLGWLRRVLLDGEDVLPELLEDLAALLSFEEGLL 229 (419)
T ss_pred -HHhc---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEEEecccceeeeeeeECCcccHHHHHHHhhhccccccccc
Confidence 5654 67999999875 799999999999999999999999 8765 234552
Q ss_pred cccc------CCCCC------CChh--------------HHH----HHHHHHhcCcc-eeeecccCCCcccccHHHHHHH
Q 018265 231 LSQV------KPSCS------LTPT--------------EID----YLTDRIQNGGT-EVVEAKTGAGSATLSMAYAAAK 279 (358)
Q Consensus 231 ~s~~------~v~~~------~~~~--------------~~~----~l~~~v~~~~~-~ii~~~~gkg~t~~s~A~ai~~ 279 (358)
|+.. .+++. +.++ .++ ++.+....... +..+....++...|| ..+++
T Consensus 230 ~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~g~~y~--e~a~~ 307 (419)
T cd05296 230 FGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRGGAGYS--EAALA 307 (419)
T ss_pred hHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhcCcchH--HHHHH
Confidence 1100 00100 0111 111 22222221100 000000012334444 78999
Q ss_pred HHHHHHccCCCCCcEEEee-EEeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHH
Q 018265 280 FADACLRGLRGDAGVIECA-YVASTV---TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKE 344 (358)
Q Consensus 280 ii~ai~~~~~~~~~v~~~s-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~ 344 (358)
+++||++|++. ++.++ -.+|.+ |+|.++++||.++++|+.++.. ++|++..+++++.-...
T Consensus 308 ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~~~ 372 (419)
T cd05296 308 LISAIYNDKGD---IHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVKAY 372 (419)
T ss_pred HHHHHhcCCCc---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHHHH
Confidence 99999998753 44444 457765 8899999999999999999876 69999998886654433
No 41
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.97 E-value=1.6e-28 Score=244.55 Aligned_cols=286 Identities=18% Similarity=0.208 Sum_probs=191.3
Q ss_pred CEEEEEcCCCchHHHHHHH----HHhC--CC-CcEEEEEeCCC-chh----HHHHHhcCCCCCeEEEEeCCCcHHhhhCC
Q 018265 47 FKVAVLGAAGGIGQPLAML----MKIN--PL-VSVLHLYDVVN-TPG----VTADISHMDTNAVVRGFLGQQQLEDALTG 114 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~----l~~~--~~-~~el~L~D~~~-~~g----~~~dl~~~~~~~~v~~~~~t~d~~~al~~ 114 (358)
|||+|||| |+ +.++. |+.. .+ .++|+|+|+++ ... .+..+.+.. ...++.. .|+|+++|++|
T Consensus 1 ~KI~iIGa-GS---~~tp~li~~l~~~~~~l~~~ei~L~DId~~rl~~v~~l~~~~~~~~-g~~~~v~-~Ttdr~eAl~g 74 (437)
T cd05298 1 FKIVIAGG-GS---TYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKEN-YPEIKFV-YTTDPEEAFTD 74 (437)
T ss_pred CeEEEECC-cH---HHHHHHHHHHHhCcccCCCCEEEEECCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EECCHHHHhCC
Confidence 79999999 74 34443 3333 23 48999999998 222 223333221 2345554 46899999999
Q ss_pred CCEEEEcC---CC---------CCCCCC--------CHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHH
Q 018265 115 MDIVIIPA---GV---------PRKPGM--------TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 174 (358)
Q Consensus 115 aDiVIi~a---g~---------~~~~g~--------~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~ 174 (358)
|||||++. |. |.++|. .....+.||++++.+++++|+++||+||+|++|||++++|+++
T Consensus 75 ADfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~pda~lin~tNP~~~vt~~~- 153 (437)
T cd05298 75 ADFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAAIVAEAL- 153 (437)
T ss_pred CCEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH-
Confidence 99999964 32 334432 2566789999999999999999999999999999999998654
Q ss_pred HHHHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE-ecCC----------Ccccccccc----------
Q 018265 175 EVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-GHAG----------VTILPLLSQ---------- 233 (358)
Q Consensus 175 ~~~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G-~hg~----------~~~vp~~s~---------- 233 (358)
++. +|+.||||+|+... .++..+|+.+|+++++++..+.| ||.. ++.+|....
T Consensus 154 ---~~~--~~~~kviGlC~~~~-~~~~~la~~lg~~~~~v~~~~~GlNH~~w~~~~~~~~G~D~~p~l~e~~~~~~~~~~ 227 (437)
T cd05298 154 ---RRL--FPNARILNICDMPI-AIMDSMAAILGLDRKDLEPDYFGLNHFGWFTKIYDKQGEDLLPKLREHVKENGYLPP 227 (437)
T ss_pred ---HHH--CCCCCEEEECCcHH-HHHHHHHHHhCCCHHHceEEEEeecchhhhhheEECCCCchHHHHHHHHhccCCCcc
Confidence 454 77899999998775 47899999999999999999999 3322 134442110
Q ss_pred ----c---C-------------------CCCC-----C-Chh--------------HHHHHHHHHhcCc-----ceeeec
Q 018265 234 ----V---K-------------------PSCS-----L-TPT--------------EIDYLTDRIQNGG-----TEVVEA 262 (358)
Q Consensus 234 ----~---~-------------------v~~~-----~-~~~--------------~~~~l~~~v~~~~-----~~ii~~ 262 (358)
. . +++. + .++ .+++..++..+.. .+-.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~ 307 (437)
T cd05298 228 DSDEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIETGTAEG 307 (437)
T ss_pred cccccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhhcCChhh
Confidence 0 0 1110 0 100 1111112111000 000000
Q ss_pred ccCCCcccccHHHHHHHHHHHHHccCCCCCcEEEeeE-EeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHH
Q 018265 263 KTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAY-VASTV---TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGL 338 (358)
Q Consensus 263 ~~gkg~t~~s~A~ai~~ii~ai~~~~~~~~~v~~~s~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l 338 (358)
.+.. +. ..|.++++++++|++|++ .+++++. ++|.| ++|+++|+||+||++|+.++.- ++|++...+++
T Consensus 308 ~~~~-~~--~ya~~a~~ii~aI~~d~~---~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~~~l~ 380 (437)
T cd05298 308 STFH-VD--VHGEYIVDLAASIAYNTK---ERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFYKGLM 380 (437)
T ss_pred hhhh-cc--chHHHHHHHHHHHHcCCC---eEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHHHHHH
Confidence 0000 11 146889999999999875 4788874 57776 6899999999999999999876 69999999987
Q ss_pred HHHHHHHHHHHHHh
Q 018265 339 EKAKKELAGSIQKG 352 (358)
Q Consensus 339 ~~s~~~l~~~~~~~ 352 (358)
+.-...-+-.++.+
T Consensus 381 ~~~~~~e~l~veAa 394 (437)
T cd05298 381 EQQVAYEKLLVEAY 394 (437)
T ss_pred HHHHHHHHHHHHHH
Confidence 76555444444433
No 42
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.4e-27 Score=231.71 Aligned_cols=293 Identities=19% Similarity=0.242 Sum_probs=191.1
Q ss_pred CCCCEEEEEcCCCchHHHHHH--HHHhCC-C-CcEEEEEeCCC-chhHH----HHHhcCCCCCeEEEEeCCCcHHhhhCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAM--LMKINP-L-VSVLHLYDVVN-TPGVT----ADISHMDTNAVVRGFLGQQQLEDALTG 114 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~--~l~~~~-~-~~el~L~D~~~-~~g~~----~dl~~~~~~~~v~~~~~t~d~~~al~~ 114 (358)
++++||+|||| |+++..-.. .|.+.+ + ..||+|+|+++ ..... ..+.+.. .+.++.. .++|+++||+|
T Consensus 1 m~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~~~el~L~Did~~r~~~i~~~~~~~v~~~-g~~~kv~-~ttd~~eAl~g 77 (442)
T COG1486 1 MKKFKIVIIGG-GSTYTPKLLLGDLARTEELPVRELALYDIDEERLKIIAILAKKLVEEA-GAPVKVE-ATTDRREALEG 77 (442)
T ss_pred CCcceEEEECC-CccccHHHHHHHHhcCccCCcceEEEEeCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EecCHHHHhcC
Confidence 45679999999 854433321 223332 3 57999999987 22222 2222222 2336654 36899999999
Q ss_pred CCEEEEcC---C---------CCCCCCC--------CHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHH
Q 018265 115 MDIVIIPA---G---------VPRKPGM--------TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 174 (358)
Q Consensus 115 aDiVIi~a---g---------~~~~~g~--------~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~ 174 (358)
||||+.+. | +|.|+|. .......|++|++.+|++.|+++||+||+|++|||+.++|+++
T Consensus 78 AdfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P~Aw~lNytNP~~~vTeAv- 156 (442)
T COG1486 78 ADFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCPNAWMLNYTNPAAIVTEAV- 156 (442)
T ss_pred CCEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCCCceEEeccChHHHHHHHH-
Confidence 99999964 2 3555552 2455678999999999999999999999999999999997654
Q ss_pred HHHHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCC-CCCceEEEE-ecCC---------Cccccc-------------
Q 018265 175 EVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDP-REVDVPVVG-GHAG---------VTILPL------------- 230 (358)
Q Consensus 175 ~~~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~-~~v~~~v~G-~hg~---------~~~vp~------------- 230 (358)
+++ +|..|++|+|+... -....+|+.||+++ ++++..+.| ||.. .+.+|.
T Consensus 157 ---~r~--~~~~K~VGlCh~~~-g~~~~lAe~L~~~~~~~l~~~~aGlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~ 230 (442)
T COG1486 157 ---RRL--YPKIKIVGLCHGPI-GIAMELAEVLGLEPREDLRYRVAGLNHMVWILRVRDDGEDLYPELLEALEEGGSPSE 230 (442)
T ss_pred ---HHh--CCCCcEEeeCCchH-HHHHHHHHHhCCCchhceeEEEeechhhhhhhHhhhcCccchHHHHHHHhccccCCc
Confidence 554 45449999998764 46899999999975 999999999 4432 122221
Q ss_pred ----------ccccC----C---CCC-----------------------CChhHHHHHHHHH----hc-CcceeeecccC
Q 018265 231 ----------LSQVK----P---SCS-----------------------LTPTEIDYLTDRI----QN-GGTEVVEAKTG 265 (358)
Q Consensus 231 ----------~s~~~----v---~~~-----------------------~~~~~~~~l~~~v----~~-~~~~ii~~~~g 265 (358)
|.... . ++. ...+++.+.+.+. .+ .-.+..+....
T Consensus 231 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~~~p~~~~~ 310 (442)
T COG1486 231 PENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELKEKPEELEK 310 (442)
T ss_pred cccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhhcCchhhhh
Confidence 11000 0 000 0111111111110 11 00000010011
Q ss_pred CCcc--cccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018265 266 AGSA--TLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV---TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 339 (358)
Q Consensus 266 kg~t--~~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~ 339 (358)
++.+ .|+ .+++++++||++|++. ++.+. -.+|.+ |+|.++++||.|+++|++++.. ++|+++-+++++
T Consensus 311 ~~~~~~~~~--e~a~~ii~Ai~~~~~~---~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~lP~~~~~l~~ 384 (442)
T COG1486 311 RIGAGKYSS--EYASNIINAIENNKPS---RIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDLPEFVKGLMH 384 (442)
T ss_pred cCCcccccH--HHHHHHHHHHhcCCce---EEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCCCHHHHHHHH
Confidence 2222 444 7889999999999763 55454 457875 8999999999999999999887 699999999888
Q ss_pred HHHHHHHHHHHHh
Q 018265 340 KAKKELAGSIQKG 352 (358)
Q Consensus 340 ~s~~~l~~~~~~~ 352 (358)
.....-+-.++.+
T Consensus 385 ~~i~~e~l~veA~ 397 (442)
T COG1486 385 TNINVEELTVEAA 397 (442)
T ss_pred HHHHHHHHHHHHH
Confidence 8766555444443
No 43
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.95 E-value=1.4e-26 Score=231.09 Aligned_cols=286 Identities=19% Similarity=0.160 Sum_probs=193.8
Q ss_pred CEEEEEcCCCchHHHHHH--HHHhC-CCC-cEEEEEeCCC--chhHHHHHhcCC--CCCeEEEEeCCCcHHhhhCCCCEE
Q 018265 47 FKVAVLGAAGGIGQPLAM--LMKIN-PLV-SVLHLYDVVN--TPGVTADISHMD--TNAVVRGFLGQQQLEDALTGMDIV 118 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~--~l~~~-~~~-~el~L~D~~~--~~g~~~dl~~~~--~~~~v~~~~~t~d~~~al~~aDiV 118 (358)
+||+|||| |.+|++.+. .++.. .+. .+|+|+|+++ ++....++.+.. .....+.. .++|+++|++|||+|
T Consensus 1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~-~ttD~~eal~~AD~V 78 (423)
T cd05297 1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIE-ATTDRREALDGADFV 78 (423)
T ss_pred CeEEEECC-ChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEE-EeCCHHHHhcCCCEE
Confidence 58999998 999999877 45433 332 4999999987 344444443321 11223332 367999999999999
Q ss_pred EEcCCCCCCCCCCH----------------------HhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHH
Q 018265 119 IIPAGVPRKPGMTR----------------------DDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEV 176 (358)
Q Consensus 119 Ii~ag~~~~~g~~r----------------------~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~ 176 (358)
|++++....++.++ .....+|++++.++++.++++||++|++++|||++++|+++
T Consensus 79 i~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p~a~~i~~tNPv~i~t~~~--- 155 (423)
T cd05297 79 INTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCPDAWLLNYANPMAELTWAL--- 155 (423)
T ss_pred EEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCCCCEEEEcCChHHHHHHHH---
Confidence 99987544433333 56778999999999999999999999999999999998654
Q ss_pred HHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE-ecCC---------Ccccccccc-----------cC
Q 018265 177 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-GHAG---------VTILPLLSQ-----------VK 235 (358)
Q Consensus 177 ~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G-~hg~---------~~~vp~~s~-----------~~ 235 (358)
++.++ .|++|+|+. +.+++..+|+.+|+++++|+++++| ||.. ++.+|.... ..
T Consensus 156 -~k~~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~~~ 230 (423)
T cd05297 156 -NRYTP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQVAGINHMAWLLKFEYNGEDLYPLLDEWIEEGSEEWDQLS 230 (423)
T ss_pred -HHhCC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEEEeeccHhhhhhheECCcchHHHHHHHHhccCccchhcc
Confidence 66655 699999865 6789999999999999999999999 4433 234442111 11
Q ss_pred -CC-----------C-------C------CChhHHHH------------------HHHHHhcCcceeeec--ccCCCccc
Q 018265 236 -PS-----------C-------S------LTPTEIDY------------------LTDRIQNGGTEVVEA--KTGAGSAT 270 (358)
Q Consensus 236 -v~-----------~-------~------~~~~~~~~------------------l~~~v~~~~~~ii~~--~~gkg~t~ 270 (358)
+. . . ..++.... +........ .-+. ....+...
T Consensus 231 ~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 308 (423)
T cd05297 231 PVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLI--LAEIDKEELDPVKR 308 (423)
T ss_pred cchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhc--cchhcchhcccccc
Confidence 10 0 0 01011110 111111100 0000 00011222
Q ss_pred ccHHHHHHHHHHHHHccCCCCCcEEEee-EEeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018265 271 LSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV---TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELA 346 (358)
Q Consensus 271 ~s~A~ai~~ii~ai~~~~~~~~~v~~~s-~~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~ 346 (358)
+ +..++++++||.+|++ .++.++ -++|.+ |+|.++++||.|+++|+.++.. ++|++..+++++.-...-+
T Consensus 309 ~--~e~a~~ii~ai~~~~~---~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~~~~~~e~ 382 (423)
T cd05297 309 S--GEYASPIIEALVTGKP---RRINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIRPRINVQE 382 (423)
T ss_pred c--hHHHHHHHHHHhcCCc---eEEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHHHHHHHHH
Confidence 3 4678999999999865 355454 356765 8899999999999999999877 6999999988776554444
Q ss_pred HHHH
Q 018265 347 GSIQ 350 (358)
Q Consensus 347 ~~~~ 350 (358)
-.++
T Consensus 383 l~ve 386 (423)
T cd05297 383 LAVE 386 (423)
T ss_pred HHHH
Confidence 3343
No 44
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.84 E-value=2.8e-20 Score=164.17 Aligned_cols=152 Identities=20% Similarity=0.234 Sum_probs=105.4
Q ss_pred EEEEEcCCCchHHHHH--HHHHhCC-C-CcEEEEEeCCC-c----hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEE
Q 018265 48 KVAVLGAAGGIGQPLA--MLMKINP-L-VSVLHLYDVVN-T----PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIV 118 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a--~~l~~~~-~-~~el~L~D~~~-~----~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiV 118 (358)
||+|||| |++-.... ..+...+ + .+||+|+|+|+ . ...+..+.... ...++.. .|+|+++|++|||||
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~~ei~L~Did~~RL~~~~~~~~~~~~~~-~~~~~v~-~ttd~~eAl~gADfV 77 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELSGSEIVLMDIDEERLEIVERLARRMVEEA-GADLKVE-ATTDRREALEGADFV 77 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTSTEEEEEEE-SCHHHHHHHHHHHHHHHHHC-TTSSEEE-EESSHHHHHTTESEE
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc-CCCeEEE-EeCCHHHHhCCCCEE
Confidence 8999999 86644432 2334433 3 46999999997 1 12222332221 2334433 368999999999999
Q ss_pred EEcCC------------CCCCCCCC----------HHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHH
Q 018265 119 IIPAG------------VPRKPGMT----------RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEV 176 (358)
Q Consensus 119 Ii~ag------------~~~~~g~~----------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~ 176 (358)
|++.. .|.++|.. ......|++|++.++++.|+++|||||+||+|||+.++|..+
T Consensus 78 i~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~PdAw~iNytNP~~~vt~a~--- 154 (183)
T PF02056_consen 78 INQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCPDAWLINYTNPMGIVTEAL--- 154 (183)
T ss_dssp EE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEE-SSSHHHHHHHH---
T ss_pred EEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCCCcEEEeccChHHHHHHHH---
Confidence 99754 35565522 566789999999999999999999999999999999997544
Q ss_pred HHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCC
Q 018265 177 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGL 209 (358)
Q Consensus 177 ~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v 209 (358)
.+. +|..|++|+|+... -+...+|+.||.
T Consensus 155 -~r~--~~~~k~vGlCh~~~-~~~~~la~~L~~ 183 (183)
T PF02056_consen 155 -SRY--TPKIKVVGLCHGPQ-GTRRQLAKLLGM 183 (183)
T ss_dssp -HHH--STTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred -HHh--CCCCCEEEECCCHH-HHHHHHHHHhCc
Confidence 444 45579999998764 578999999874
No 45
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.86 E-value=9e-08 Score=93.04 Aligned_cols=113 Identities=19% Similarity=0.296 Sum_probs=81.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch--------------hHHHHHh-cCCCCCeEEEEeCCCcHHhh
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--------------GVTADIS-HMDTNAVVRGFLGQQQLEDA 111 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~--------------g~~~dl~-~~~~~~~v~~~~~t~d~~~a 111 (358)
|||+|+|. |.||...+..|++.|+ +++++|+++.+ |. .+|. +.....+++. |+|+++|
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GH--eVv~vDid~~KV~~ln~g~~PI~EpgL-e~ll~~~~~~gRl~f---Ttd~~~a 73 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGH--EVVCVDIDESKVELLNKGISPIYEPGL-EELLKENLASGRLRF---TTDYEEA 73 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHhCCCCCCcCccH-HHHHHhccccCcEEE---EcCHHHH
Confidence 79999998 9999999999999998 99999998611 11 1121 1111123443 6899999
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEe--cCCCCccHHH
Q 018265 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI--SNPVNSTVPI 172 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNP~d~~t~~ 172 (358)
++++|+++|+.|.|.++.. ..++..+...++.|.++.+...+++. |-|+.....+
T Consensus 74 ~~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v 130 (414)
T COG1004 74 VKDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEV 130 (414)
T ss_pred HhcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHH
Confidence 9999999999999977622 22467788888888887765344444 6888776554
No 46
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=98.73 E-value=3.3e-08 Score=87.78 Aligned_cols=118 Identities=26% Similarity=0.397 Sum_probs=76.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--c-h--hHHHH----H-hcCCC--------CCeEEEEeCCCcHH
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-P--GVTAD----I-SHMDT--------NAVVRGFLGQQQLE 109 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~-~--g~~~d----l-~~~~~--------~~~v~~~~~t~d~~ 109 (358)
||+|+|| |.+|..+|..++..|+ +++|+|.+. . . ....+ + ..... ..+++. ++|++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~dl~ 74 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGY--EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF---TTDLE 74 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS--EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE---ESSGG
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCC--cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc---ccCHH
Confidence 7999998 9999999999999998 999999987 1 1 11111 1 11110 123443 46886
Q ss_pred hhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcE
Q 018265 110 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRL 188 (358)
Q Consensus 110 ~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kv 188 (358)
++. +||+||.+. .+++++.+++..++.+++ |+++ +.||...+-. ++. ..... .++|+
T Consensus 75 ~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~i--lasnTSsl~i---~~l-a~~~~-~p~R~ 132 (180)
T PF02737_consen 75 EAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDTI--LASNTSSLSI---SEL-AAALS-RPERF 132 (180)
T ss_dssp GGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTSE--EEE--SSS-H---HHH-HTTSS-TGGGE
T ss_pred HHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCce--EEecCCCCCH---HHH-HhccC-cCceE
Confidence 655 999999984 457899999999999998 6774 4688776553 222 22223 35678
Q ss_pred EEeee
Q 018265 189 LGVTM 193 (358)
Q Consensus 189 iG~t~ 193 (358)
+|+-.
T Consensus 133 ig~Hf 137 (180)
T PF02737_consen 133 IGMHF 137 (180)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 88753
No 47
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.64 E-value=1.6e-07 Score=89.70 Aligned_cols=122 Identities=24% Similarity=0.306 Sum_probs=85.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chh--HHHH-Hhc---CC--C----CCeEEEEeCCCcHHh
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPG--VTAD-ISH---MD--T----NAVVRGFLGQQQLED 110 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g--~~~d-l~~---~~--~----~~~v~~~~~t~d~~~ 110 (358)
-+||+|||| |.+|+.+|..++..|+ +|+|+|+++ ..+ .... +.. .. . ...+..+..++|+ .
T Consensus 3 i~kv~ViGa-G~MG~gIA~~~A~~G~--~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~-~ 78 (307)
T COG1250 3 IKKVAVIGA-GVMGAGIAAVFALAGY--DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDL-A 78 (307)
T ss_pred ccEEEEEcc-cchhHHHHHHHhhcCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCch-h
Confidence 469999998 9999999999999767 999999986 111 1111 111 10 0 1112223345676 5
Q ss_pred hhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEE
Q 018265 111 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLL 189 (358)
Q Consensus 111 al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kvi 189 (358)
++++||+||..+ .+|.++.+++..++.+++ |++ |+.||.+.+...-++ .... .|+|++
T Consensus 79 ~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~a--IlASNTSsl~it~ia----~~~~-rper~i 137 (307)
T COG1250 79 ALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDA--ILASNTSSLSITELA----EALK-RPERFI 137 (307)
T ss_pred HhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCc--EEeeccCCCCHHHHH----HHhC-CchhEE
Confidence 899999999984 678999999999999999 688 558999887653222 2222 356788
Q ss_pred Eee
Q 018265 190 GVT 192 (358)
Q Consensus 190 G~t 192 (358)
|+.
T Consensus 138 G~H 140 (307)
T COG1250 138 GLH 140 (307)
T ss_pred EEe
Confidence 873
No 48
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.52 E-value=1.3e-06 Score=84.47 Aligned_cols=118 Identities=17% Similarity=0.150 Sum_probs=81.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhH-----H--H-HHhcCC-----CCCeEEEEeCCCcHHhhh
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGV-----T--A-DISHMD-----TNAVVRGFLGQQQLEDAL 112 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~-----~--~-dl~~~~-----~~~~v~~~~~t~d~~~al 112 (358)
.||+|||+ |.+|+.+|..++..|+ +++++|++. .... . + .+.... ...+++. ++++++++
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~--~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~---~~~l~~av 81 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGL--DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF---VATIEACV 81 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee---cCCHHHHh
Confidence 48999998 9999999999999998 999999976 1111 0 1 111110 0122332 46788999
Q ss_pred CCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe
Q 018265 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~ 191 (358)
++||+||.+. .+|..+.+++...+.+++| ++ |+.||.+.+... ++ ...... ++|++|+
T Consensus 82 ~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s---~l-a~~~~~-p~R~~g~ 140 (321)
T PRK07066 82 ADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPT---DF-YARATH-PERCVVG 140 (321)
T ss_pred cCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHH---HH-HHhcCC-cccEEEE
Confidence 9999999984 4568888999999999985 55 557888866542 22 222232 4677776
No 49
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.46 E-value=7.7e-07 Score=79.40 Aligned_cols=133 Identities=20% Similarity=0.279 Sum_probs=76.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCC----------------CCCeEEEEeCCCcHHh
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TNAVVRGFLGQQQLED 110 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~----------------~~~~v~~~~~t~d~~~ 110 (358)
|||+|||. |+||..+|..|+..|+ +++.+|+++. .+..++... ...+++. ++|+++
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~--~V~g~D~~~~--~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~---t~~~~~ 72 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGH--QVIGVDIDEE--KVEALNNGELPIYEPGLDELLKENVSAGRLRA---TTDIEE 72 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS--EEEEE-S-HH--HHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEE---ESEHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCC--EEEEEeCChH--HHHHHhhccccccccchhhhhccccccccchh---hhhhhh
Confidence 79999998 9999999999999998 9999999861 111122211 1234554 468889
Q ss_pred hhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-cCCCCccHHHHHHHHHHhCCCCCCcE
Q 018265 111 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI-SNPVNSTVPIAAEVFKKVGTYDPKRL 188 (358)
Q Consensus 111 al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~~~~~~~~~~~~p~~kv 188 (358)
++++||++|++.+.|...+.+ -+...+.+.++.|.++. ++.+|++= |=|....-.++...+.+.++.. .=
T Consensus 73 ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~~~--~~ 144 (185)
T PF03721_consen 73 AIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSGKK--ED 144 (185)
T ss_dssp HHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCCTT--TC
T ss_pred hhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhcccc--cC
Confidence 999999999999888655321 12344455555555544 34444333 6788776645555566665533 33
Q ss_pred EEeeecc
Q 018265 189 LGVTMLD 195 (358)
Q Consensus 189 iG~t~ld 195 (358)
|+++..+
T Consensus 145 f~la~~P 151 (185)
T PF03721_consen 145 FHLAYSP 151 (185)
T ss_dssp EEEEE--
T ss_pred CeEEECC
Confidence 4554433
No 50
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.46 E-value=3.7e-06 Score=81.98 Aligned_cols=170 Identities=13% Similarity=0.016 Sum_probs=105.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHh-cCC--CCCeEEEEeCC----CcHHhhhCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADIS-HMD--TNAVVRGFLGQ----QQLEDALTG 114 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~-~~~--~~~~v~~~~~t----~d~~~al~~ 114 (358)
.+++||.|+||+|++|++++..|+..+. +|+.+|+... .....++. ... ....+..+.+. .++.+.+++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~ 90 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQ--TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN 90 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence 3457999999999999999999999887 8999997541 11111111 000 01123222211 234556799
Q ss_pred CCEEEEcCCCCCCC--CCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC------CCccHHHHHHHHHHhCCCCCC
Q 018265 115 MDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP------VNSTVPIAAEVFKKVGTYDPK 186 (358)
Q Consensus 115 aDiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP------~d~~t~~~~~~~~~~~~~p~~ 186 (358)
+|+||++|+....+ .+........|+....++.+.+++...+ .++++|.. .+... .+..-..+.
T Consensus 91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-~~v~~SS~~vyg~~~~~~~-------~e~~~~~p~ 162 (348)
T PRK15181 91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-SFTYAASSSTYGDHPDLPK-------IEERIGRPL 162 (348)
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeechHhhCCCCCCCC-------CCCCCCCCC
Confidence 99999998854321 1234556788999999999999887533 34444321 11100 011112244
Q ss_pred cEEEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEecC
Q 018265 187 RLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (358)
Q Consensus 187 kviG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg 223 (358)
..+|.+.+...++...+++..|++...++ +.++|.+.
T Consensus 163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 163 SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 57888877777776667777788776665 56888653
No 51
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.45 E-value=1.9e-06 Score=82.02 Aligned_cols=119 Identities=19% Similarity=0.268 Sum_probs=80.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-c--hhH--H---HH-HhcCC-C--------CCeEEEEeCCCcH
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--T---AD-ISHMD-T--------NAVVRGFLGQQQL 108 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~--~g~--~---~d-l~~~~-~--------~~~v~~~~~t~d~ 108 (358)
.||+|||+ |.+|..+|..++..|+ +++++|+++ . .+. . ++ +.+.. . ..+++ .++|+
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~---~~~~~ 79 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGV--DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLR---FTTDL 79 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeE---eeCCH
Confidence 38999998 9999999999999998 999999987 1 111 0 11 11110 0 01233 34677
Q ss_pred HhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC--CCeEEEEecCCCCccHHHHHHHHHHhCCCCCC
Q 018265 109 EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC--PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (358)
Q Consensus 109 ~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~ 186 (358)
+++++||+||.+. .++.++.+++...+.+++ |++ |++||........+ .....+ ++
T Consensus 80 -~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~--il~snTS~~~~~~l----a~~~~~-~~ 137 (286)
T PRK07819 80 -GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDA--VLASNTSSIPIMKL----AAATKR-PG 137 (286)
T ss_pred -HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHH----HhhcCC-Cc
Confidence 6799999999984 567888899999999997 465 34677776554322 233333 46
Q ss_pred cEEEeee
Q 018265 187 RLLGVTM 193 (358)
Q Consensus 187 kviG~t~ 193 (358)
|++|+..
T Consensus 138 r~~g~hf 144 (286)
T PRK07819 138 RVLGLHF 144 (286)
T ss_pred cEEEEec
Confidence 7877743
No 52
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.41 E-value=6.9e-06 Score=75.08 Aligned_cols=102 Identities=20% Similarity=0.155 Sum_probs=62.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCC--CCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--NAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||+|||++|.+|++++..|...+. +|.++|++. ......+..+... ....+.. . ++.+++++++|+||++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~--~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~-~-~~~~ea~~~aDvVilav 76 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN--KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVT-G-ADNAEAAKRADVVILAV 76 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC--EEEEEEcCHHHHHHHHHHHHhhccccCCCceEE-E-eChHHHHhcCCEEEEEC
Confidence 6999998449999999999998886 899999875 2222222221110 0111111 1 23468899999999985
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCc
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNS 168 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~ 168 (358)
.. ..+.++++.+....++.+||-++||...
T Consensus 77 p~----------------~~~~~~l~~l~~~l~~~vvI~~~ngi~~ 106 (219)
T TIGR01915 77 PW----------------DHVLKTLESLRDELSGKLVISPVVPLAS 106 (219)
T ss_pred CH----------------HHHHHHHHHHHHhccCCEEEEeccCcee
Confidence 21 2223333444433334577788999875
No 53
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.41 E-value=4.3e-06 Score=88.60 Aligned_cols=179 Identities=15% Similarity=0.074 Sum_probs=108.7
Q ss_pred cccccccCCCCCCCCCEEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCC-Cc--
Q 018265 32 GLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQ-QQ-- 107 (358)
Q Consensus 32 ~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~~a~~l~~~-~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t-~d-- 107 (358)
+-+|-.|.. .+.|||.|+||+||+|++++..|+.. ++ +|+.+|++... . .++.. ...+..+.+. +|
T Consensus 304 ~~~~~~~~~---~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~--~V~~l~r~~~~-~-~~~~~---~~~~~~~~gDl~d~~ 373 (660)
T PRK08125 304 LNSKPACSA---KRRTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDA-I-SRFLG---HPRFHFVEGDISIHS 373 (660)
T ss_pred ecccchhhh---hcCCEEEEECCCchHHHHHHHHHHhCCCc--EEEEEeCCchh-h-hhhcC---CCceEEEeccccCcH
Confidence 555666654 47889999999999999999999874 56 99999976521 1 11111 1122222111 11
Q ss_pred --HHhhhCCCCEEEEcCCCCC--CCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC-CCccH--HHHHHHHHH-
Q 018265 108 --LEDALTGMDIVIIPAGVPR--KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTV--PIAAEVFKK- 179 (358)
Q Consensus 108 --~~~al~~aDiVIi~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-~d~~t--~~~~~~~~~- 179 (358)
++++++++|+||++|+... .......+.+..|+....++.++++++. . .+|++|.. +.-.. ....+-...
T Consensus 374 ~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~-~~V~~SS~~vyg~~~~~~~~E~~~~~ 451 (660)
T PRK08125 374 EWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K-RIIFPSTSEVYGMCTDKYFDEDTSNL 451 (660)
T ss_pred HHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C-eEEEEcchhhcCCCCCCCcCcccccc
Confidence 3457899999999987543 2223345677889999999999999875 3 45554432 11100 000000000
Q ss_pred --hCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 180 --VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 180 --~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
.+.-++...+|.+.+...++...+++..|++..-++ ..++|.+
T Consensus 452 ~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 452 IVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR 497 (660)
T ss_pred ccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence 000012346888877777777777888888776665 4578864
No 54
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.40 E-value=2.9e-06 Score=80.76 Aligned_cols=120 Identities=20% Similarity=0.329 Sum_probs=76.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHH----Hh-----cCCC---------CCeEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTAD----IS-----HMDT---------NAVVRGFLGQQ 106 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~d----l~-----~~~~---------~~~v~~~~~t~ 106 (358)
.+||+|||+ |.+|+.+|..++..|. +|+++|+++ ......+ +. .... ...++. ++
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~ 76 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGF--DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITL---TT 76 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEE---eC
Confidence 359999998 9999999999999887 999999976 1111111 10 0000 012332 46
Q ss_pred cHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCccHHHHHHHHHHhCCCCC
Q 018265 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (358)
Q Consensus 107 d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~~~~~p~ 185 (358)
|+++++++||+||++. ..+.++.+++.+++.++++ +++| ++|....... +. ...... +
T Consensus 77 d~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~ii--~sntSt~~~~---~~-~~~~~~-~ 135 (287)
T PRK08293 77 DLAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKTIF--ATNSSTLLPS---QF-AEATGR-P 135 (287)
T ss_pred CHHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCCEE--EECcccCCHH---HH-HhhcCC-c
Confidence 8888899999999984 2346777788888888875 5533 4666654331 21 222222 4
Q ss_pred CcEEEee
Q 018265 186 KRLLGVT 192 (358)
Q Consensus 186 ~kviG~t 192 (358)
.|++|+.
T Consensus 136 ~r~vg~H 142 (287)
T PRK08293 136 EKFLALH 142 (287)
T ss_pred ccEEEEc
Confidence 5777763
No 55
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.40 E-value=7.6e-06 Score=79.19 Aligned_cols=175 Identities=16% Similarity=0.065 Sum_probs=102.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCCCCEEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLG----QQQLEDALTGMDIVI 119 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~----t~d~~~al~~aDiVI 119 (358)
.++||.|+||+|++|++++..|+..|. +|++++++. ......++........+..+.+ ..++.++++++|+||
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGY--AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 356899999999999999999999887 887776654 2221111211111112222211 124567788999999
Q ss_pred EcCCCCCCCCCC-HHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC-Ccc------HHHHHHHH------HHhCCCCC
Q 018265 120 IPAGVPRKPGMT-RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV-NST------VPIAAEVF------KKVGTYDP 185 (358)
Q Consensus 120 i~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~-d~~------t~~~~~~~------~~~~~~p~ 185 (358)
++|+.......+ ..++...|+.....+++.+.+...-..++++|.-. ... .....+-. .. ...++
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~-~~~~p 164 (338)
T PLN00198 86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLT-SEKPP 164 (338)
T ss_pred EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhh-hcCCc
Confidence 999743211122 23456789999999999998764223455544321 100 00000000 00 01234
Q ss_pred CcEEEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 186 KRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 186 ~kviG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
...+|.+.+...++...+++..|++..-++ ..|+|.+
T Consensus 165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence 556777776666677777777787665554 4688865
No 56
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.38 E-value=1.9e-07 Score=88.41 Aligned_cols=120 Identities=22% Similarity=0.234 Sum_probs=74.1
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEE----EEeCC----CcHHhhhC--CCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVR----GFLGQ----QQLEDALT--GMD 116 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~----~~~~t----~d~~~al~--~aD 116 (358)
|.|+||+|++|+.++..|+..+. .+|+++|.++ ......++......+.++ ...++ ..+..+++ +.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 68999999999999999998865 4899999987 344445553111111121 11111 23456677 999
Q ss_pred EEEEcCCCCCCC--CCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec----CCCCcc
Q 018265 117 IVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS----NPVNST 169 (358)
Q Consensus 117 iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t----NP~d~~ 169 (358)
+|+++|....-+ ...-.+.+..|+--.+++++...+++-+-.|.+.| ||.++|
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Ptnvm 138 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVM 138 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHH
Confidence 999998764322 22356678999999999999999998776666654 566555
No 57
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.37 E-value=1.5e-06 Score=92.58 Aligned_cols=120 Identities=19% Similarity=0.227 Sum_probs=84.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-c--hhH--HHH-----HhcCC-C-------CCeEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--TAD-----ISHMD-T-------NAVVRGFLGQQ 106 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~--~g~--~~d-----l~~~~-~-------~~~v~~~~~t~ 106 (358)
+-.||+|||| |.+|..+|..++..|+ +++|+|++. . .+. ..+ ..... . ..+++ .++
T Consensus 312 ~i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~---~~~ 385 (714)
T TIGR02437 312 DVKQAAVLGA-GIMGGGIAYQSASKGT--PIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGIT---PTL 385 (714)
T ss_pred ccceEEEECC-chHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeE---EeC
Confidence 3459999998 9999999999999998 999999986 1 111 111 11110 0 12333 356
Q ss_pred cHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCC
Q 018265 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (358)
Q Consensus 107 d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~ 185 (358)
|+ +++++||+||.+. .+++++.+++..++.+++ |++ |+.||...+-..-+ ..... .|
T Consensus 386 ~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasnTS~l~i~~i----a~~~~-~p 443 (714)
T TIGR02437 386 SY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDA--ILASNTSTISISLL----AKALK-RP 443 (714)
T ss_pred CH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHH----HhhcC-Cc
Confidence 77 6799999999984 567899999999999999 566 45899888664322 22233 35
Q ss_pred CcEEEee
Q 018265 186 KRLLGVT 192 (358)
Q Consensus 186 ~kviG~t 192 (358)
+|++|+-
T Consensus 444 ~r~ig~H 450 (714)
T TIGR02437 444 ENFCGMH 450 (714)
T ss_pred ccEEEEe
Confidence 7888884
No 58
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.35 E-value=3.7e-06 Score=79.87 Aligned_cols=118 Identities=18% Similarity=0.291 Sum_probs=80.3
Q ss_pred EEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCCEEEEcCCCCCCC
Q 018265 50 AVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALTGMDIVIIPAGVPRKP 128 (358)
Q Consensus 50 ~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~~aDiVIi~ag~~~~~ 128 (358)
.|+||+||+|++++..|+..+...+|..+|+........++........+.. +....++++|++++|+||++|+...-.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 4899999999999999999985569999998662222122222211001111 222357889999999999998754333
Q ss_pred C-CCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCcc
Q 018265 129 G-MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 169 (358)
Q Consensus 129 g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~ 169 (358)
+ .....+..-|+...+.+.+...+..-+ -+|+|..++++
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~Vk--rlVytSS~~vv 120 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVK--RLVYTSSISVV 120 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCC--EEEEEcCccee
Confidence 3 456778899999999999999987543 34455554443
No 59
>PLN02650 dihydroflavonol-4-reductase
Probab=98.35 E-value=9.4e-06 Score=79.03 Aligned_cols=177 Identities=16% Similarity=0.047 Sum_probs=102.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHHhcC-CCCCeEEEEe----CCCcHHhhhCCCCEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTNAVVRGFL----GQQQLEDALTGMDIV 118 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~dl~~~-~~~~~v~~~~----~t~d~~~al~~aDiV 118 (358)
..++|.|+||+|++|++++..|+..|. +|++++++.. .....++... .....+..+. ....+.++++++|+|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~V 81 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGV 81 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCC--EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEE
Confidence 345999999999999999999999887 8888877541 1111122111 0011222211 123456778899999
Q ss_pred EEcCCCCCCCCCC-HHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCcc-----HHHHHHHHH---Hh--CCCCCCc
Q 018265 119 IIPAGVPRKPGMT-RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST-----VPIAAEVFK---KV--GTYDPKR 187 (358)
Q Consensus 119 Ii~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~-----t~~~~~~~~---~~--~~~p~~k 187 (358)
|++|+.......+ ....+..|+.....+++.+.+...-.++|++|.....- .+...+-.+ .. ...++..
T Consensus 82 iH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 161 (351)
T PLN02650 82 FHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGW 161 (351)
T ss_pred EEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccc
Confidence 9998753211112 23567889999999999998765323566554331100 000000000 00 0001122
Q ss_pred EEEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEecC
Q 018265 188 LLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (358)
Q Consensus 188 viG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg 223 (358)
.+|.+.+....+...+++..|++..-++ +.++|...
T Consensus 162 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~ 198 (351)
T PLN02650 162 MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI 198 (351)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence 5777766666676777778888766664 56888653
No 60
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.35 E-value=1.7e-06 Score=92.15 Aligned_cols=118 Identities=18% Similarity=0.225 Sum_probs=83.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-c--hhH--HH----HH-hcCC-C-------CCeEEEEeCCCcH
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--TA----DI-SHMD-T-------NAVVRGFLGQQQL 108 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~--~g~--~~----dl-~~~~-~-------~~~v~~~~~t~d~ 108 (358)
.||+|||| |.+|..+|..++..|+ +++|+|++. . .+. .. .+ .... . ..+++ .++|+
T Consensus 314 ~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~---~~~~~ 387 (715)
T PRK11730 314 KQAAVLGA-GIMGGGIAYQSASKGV--PVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIR---PTLDY 387 (715)
T ss_pred ceEEEECC-chhHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeE---EeCCH
Confidence 58999998 9999999999999998 999999986 1 111 11 11 1110 0 12343 34677
Q ss_pred HhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 109 EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 109 ~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
+++++||+||.+. .+++++.+++..++++++| ++ |+.||...+-..-+ . ..... ++|
T Consensus 388 -~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~l---a-~~~~~-p~r 445 (715)
T PRK11730 388 -AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDT--ILASNTSTISISLL---A-KALKR-PEN 445 (715)
T ss_pred -HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHH---H-hhcCC-Ccc
Confidence 6799999999984 5678999999999999994 66 44899888654222 2 22333 568
Q ss_pred EEEee
Q 018265 188 LLGVT 192 (358)
Q Consensus 188 viG~t 192 (358)
++|+-
T Consensus 446 ~~g~H 450 (715)
T PRK11730 446 FCGMH 450 (715)
T ss_pred EEEEe
Confidence 88873
No 61
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.35 E-value=2.4e-06 Score=91.25 Aligned_cols=119 Identities=19% Similarity=0.251 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhH--HHH-H----hcCC-C-------CCeEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TAD-I----SHMD-T-------NAVVRGFLGQQ 106 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~--~~d-l----~~~~-~-------~~~v~~~~~t~ 106 (358)
+-.||+|||| |.+|+.+|..++..|+ +|+|+|+++ ..+. ..+ + .... . ..+++ .++
T Consensus 334 ~i~~v~ViGa-G~MG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~---~~~ 407 (737)
T TIGR02441 334 PVKTLAVLGA-GLMGAGIAQVSVDKGL--KTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLT---PTL 407 (737)
T ss_pred cccEEEEECC-CHhHHHHHHHHHhCCC--cEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE---EeC
Confidence 3358999998 9999999999999998 999999987 1111 111 1 1110 0 12343 356
Q ss_pred cHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCC
Q 018265 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (358)
Q Consensus 107 d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~ 185 (358)
|+ +++++||+||.+. .+|.++.+++..++.+++ |++ |+.||...+-..-+ ...... |
T Consensus 408 ~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~l----a~~~~~-p 465 (737)
T TIGR02441 408 DY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHC--IIASNTSALPIKDI----AAVSSR-P 465 (737)
T ss_pred CH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHH----HhhcCC-c
Confidence 77 6799999999984 678999999999999999 566 44789888664322 223333 5
Q ss_pred CcEEEe
Q 018265 186 KRLLGV 191 (358)
Q Consensus 186 ~kviG~ 191 (358)
+|++|+
T Consensus 466 ~r~ig~ 471 (737)
T TIGR02441 466 EKVIGM 471 (737)
T ss_pred cceEEE
Confidence 688887
No 62
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.34 E-value=5.6e-06 Score=83.97 Aligned_cols=167 Identities=20% Similarity=0.232 Sum_probs=109.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC----CCcHHhhhCC--C
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG----QQQLEDALTG--M 115 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~----t~d~~~al~~--a 115 (358)
.+...|.|+||+|++|+.++..++..+. .+|+++|.++ ..-...++.+.....+++.+.+ ..-.+.++++ .
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence 3456899999999999999999988754 5999999998 3344455554311223333222 2345678888 9
Q ss_pred CEEEEcCCCCCCCCC--CHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec----CCCCccHHHHHHHHHHhCCCCCCcEE
Q 018265 116 DIVIIPAGVPRKPGM--TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS----NPVNSTVPIAAEVFKKVGTYDPKRLL 189 (358)
Q Consensus 116 DiVIi~ag~~~~~g~--~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t----NP~d~~t~~~~~~~~~~~~~p~~kvi 189 (358)
|+|+++|....-|-. +-.+-...|+-..++++++..++.=+..|++.| ||.|+|
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvm-------------------- 386 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVM-------------------- 386 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHh--------------------
Confidence 999999987555533 345667899999999999999988666666655 555444
Q ss_pred EeeeccHHHHHHHHHHHhCC---CCCCC-ceEEEEecCCCcccccccc
Q 018265 190 GVTMLDVVRANTFVAEVLGL---DPREV-DVPVVGGHAGVTILPLLSQ 233 (358)
Q Consensus 190 G~t~lds~R~~~~lA~~l~v---~~~~v-~~~v~G~hg~~~~vp~~s~ 233 (358)
|.|..-...+-...++..+- ...-| .+-|+|..| +.+|+|..
T Consensus 387 GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG--SViPlFk~ 432 (588)
T COG1086 387 GATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG--SVIPLFKK 432 (588)
T ss_pred hHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC--CCHHHHHH
Confidence 44433233222333222221 11112 345889888 58998874
No 63
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.34 E-value=5.7e-06 Score=83.40 Aligned_cols=171 Identities=15% Similarity=0.037 Sum_probs=101.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
.|||.|+||+|+||++++..|+..|. +|+.+|+... +....+.+....+.+..+.. .-.+.++.++|+||++|+..
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~--~V~~ldr~~~-~~~~~~~~~~~~~~~~~~~~-Di~~~~~~~~D~ViHlAa~~ 195 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGD--EVIVIDNFFT-GRKENLVHLFGNPRFELIRH-DVVEPILLEVDQIYHLACPA 195 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCC-ccHhHhhhhccCCceEEEEC-ccccccccCCCEEEECceec
Confidence 49999999999999999999999887 9999997531 11111111111122333221 11234578999999998753
Q ss_pred C--CCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC-CCccH--HHHHHHHHH-hCCCCCCcEEEeeeccHHHH
Q 018265 126 R--KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTV--PIAAEVFKK-VGTYDPKRLLGVTMLDVVRA 199 (358)
Q Consensus 126 ~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-~d~~t--~~~~~~~~~-~~~~p~~kviG~t~lds~R~ 199 (358)
. ....+..+.+..|+....++++.+++.+ ..+|+++.- +.-.. ....+-.+. ..-+.+...+|.+.+...++
T Consensus 196 ~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~ 273 (436)
T PLN02166 196 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL 273 (436)
T ss_pred cchhhccCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHH
Confidence 2 2223456778899999999999998875 355655431 10000 000000000 00122345677777666666
Q ss_pred HHHHHHHhCCCCCCCc-eEEEEec
Q 018265 200 NTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 200 ~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
...+++..+++..-++ ..++|.+
T Consensus 274 ~~~y~~~~~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 274 AMDYHRGAGVEVRIARIFNTYGPR 297 (436)
T ss_pred HHHHHHHhCCCeEEEEEccccCCC
Confidence 6666777776655444 3477864
No 64
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.32 E-value=3.9e-06 Score=89.27 Aligned_cols=119 Identities=18% Similarity=0.293 Sum_probs=82.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHH-hCCCCcEEEEEeCCC-c--hhH--HH-HHh----cCC-C-------CCeEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN-T--PGV--TA-DIS----HMD-T-------NAVVRGFLGQQ 106 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~-~~~~~~el~L~D~~~-~--~g~--~~-dl~----~~~-~-------~~~v~~~~~t~ 106 (358)
..||+|||| |.+|+.+|..++ ..|+ +|+|+|+++ . .+. .. .+. ... . ..+++ .++
T Consensus 304 i~~v~ViGa-G~mG~~iA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~---~~~ 377 (699)
T TIGR02440 304 IKKVGILGG-GLMGGGIASVTATKAGI--PVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALIT---GTT 377 (699)
T ss_pred ccEEEEECC-cHHHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeE---EeC
Confidence 358999998 999999999988 4788 999999986 1 111 11 111 110 0 12333 346
Q ss_pred cHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCccHHHHHHHHHHhCCCCC
Q 018265 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (358)
Q Consensus 107 d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~~~~~p~ 185 (358)
|+ +++++||+||.+. .+++++.+++..++.++++ ++ |+.||...+...-++ .... .+
T Consensus 378 ~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~i~~la----~~~~-~p 435 (699)
T TIGR02440 378 DY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHT--IFASNTSSLPIGQIA----AAAS-RP 435 (699)
T ss_pred Ch-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCc--EEEeCCCCCCHHHHH----HhcC-Cc
Confidence 77 6799999999984 5678999999999999994 66 447888876543222 2223 35
Q ss_pred CcEEEee
Q 018265 186 KRLLGVT 192 (358)
Q Consensus 186 ~kviG~t 192 (358)
+|++|+-
T Consensus 436 ~r~~g~H 442 (699)
T TIGR02440 436 ENVIGLH 442 (699)
T ss_pred ccEEEEe
Confidence 6888873
No 65
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.32 E-value=2.2e-06 Score=91.29 Aligned_cols=119 Identities=19% Similarity=0.316 Sum_probs=83.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHH-hCCCCcEEEEEeCCC-c--hh--HHHHH-----hcCC-C-------CCeEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN-T--PG--VTADI-----SHMD-T-------NAVVRGFLGQQ 106 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~-~~~~~~el~L~D~~~-~--~g--~~~dl-----~~~~-~-------~~~v~~~~~t~ 106 (358)
-.||+|||| |.+|+.+|..++ ..|+ +|+|+|.+. . .+ ...+. .... . ..+++. ++
T Consensus 309 i~~v~ViGa-G~mG~giA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~ 382 (708)
T PRK11154 309 VNKVGVLGG-GLMGGGIAYVTATKAGL--PVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISG---TT 382 (708)
T ss_pred ccEEEEECC-chhhHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEE---eC
Confidence 358999998 999999999998 7788 999999976 1 11 11111 1110 0 123443 46
Q ss_pred cHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCC
Q 018265 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (358)
Q Consensus 107 d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~ 185 (358)
|+ +++++||+||.+. .+|.++.+++..++++++ |++ |+.||...+...-++ ..... +
T Consensus 383 ~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~l~i~~la----~~~~~-p 440 (708)
T PRK11154 383 DY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSSLPIGQIA----AAAAR-P 440 (708)
T ss_pred Ch-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHH----HhcCc-c
Confidence 77 7899999999984 678999999999999998 677 447898886643222 22233 4
Q ss_pred CcEEEee
Q 018265 186 KRLLGVT 192 (358)
Q Consensus 186 ~kviG~t 192 (358)
+|++|+-
T Consensus 441 ~r~ig~H 447 (708)
T PRK11154 441 EQVIGLH 447 (708)
T ss_pred cceEEEe
Confidence 6888873
No 66
>PLN02427 UDP-apiose/xylose synthase
Probab=98.30 E-value=6.9e-06 Score=81.12 Aligned_cols=115 Identities=16% Similarity=0.078 Sum_probs=73.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHHhcC---CCCCeEEEEeC----CCcHHhhhCCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHM---DTNAVVRGFLG----QQQLEDALTGM 115 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~-~~~~el~L~D~~~~~g~~~dl~~~---~~~~~v~~~~~----t~d~~~al~~a 115 (358)
.++|||.|+||+|++|++++..|+.. +. +|+.+|.+... ...+... .....++.+.+ ..++.++++++
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~--~V~~l~r~~~~--~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 87 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPH--KVLALDVYNDK--IKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA 87 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCC--EEEEEecCchh--hhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC
Confidence 35689999999999999999999987 45 88989865411 1111111 00112332211 23456778899
Q ss_pred CEEEEcCCCCCCC--CCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 018265 116 DIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 116 DiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 164 (358)
|+||++|+..... .....+.+..|+....++++..++.. ..+|++|.
T Consensus 88 d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS 136 (386)
T PLN02427 88 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 136 (386)
T ss_pred CEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEee
Confidence 9999999854211 12223456678888888888887664 35665553
No 67
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.30 E-value=1.4e-05 Score=77.78 Aligned_cols=176 Identities=15% Similarity=0.041 Sum_probs=99.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch-hHH-HHHhcCCCCCeEEE-EeCCCcHHhhhCC--CCEE
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVT-ADISHMDTNAVVRG-FLGQQQLEDALTG--MDIV 118 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~-g~~-~dl~~~~~~~~v~~-~~~t~d~~~al~~--aDiV 118 (358)
.+.++|.|+||+|++|++++..|++.|. +|+.+|++... ... ..+........+.. .....++.+++++ .|+|
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 79 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGA--EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIV 79 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCC--EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEE
Confidence 4567999999999999999999999887 88889876521 111 11211100001111 1111234455554 5999
Q ss_pred EEcCCCCCCC--CCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC-CCccHHHHHHHHHHhCCCCCCcEEEeeecc
Q 018265 119 IIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAAEVFKKVGTYDPKRLLGVTMLD 195 (358)
Q Consensus 119 Ii~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-~d~~t~~~~~~~~~~~~~p~~kviG~t~ld 195 (358)
|++++.+... .......+..|+.....+++.+.+.+....++++|.. +........ .+......++...+|.+...
T Consensus 80 ih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~-~~~e~~~~~p~~~Y~~sK~~ 158 (349)
T TIGR02622 80 FHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVW-GYRETDPLGGHDPYSSSKAC 158 (349)
T ss_pred EECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCC-CCccCCCCCCCCcchhHHHH
Confidence 9999854221 1223456788999999999998776533356665542 110000000 00011123445678887766
Q ss_pred HHHHHHHHHHHh-------CCCCCCCc-eEEEEec
Q 018265 196 VVRANTFVAEVL-------GLDPREVD-VPVVGGH 222 (358)
Q Consensus 196 s~R~~~~lA~~l-------~v~~~~v~-~~v~G~h 222 (358)
..++...+++.+ +++...++ +.++|..
T Consensus 159 ~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 159 AELVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred HHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 666666666655 44444443 4577753
No 68
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=98.28 E-value=1e-06 Score=79.48 Aligned_cols=122 Identities=19% Similarity=0.327 Sum_probs=85.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-c-----hhHHHHHhcCCC-----------------CCeEEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T-----PGVTADISHMDT-----------------NAVVRG 101 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~-----~g~~~dl~~~~~-----------------~~~v~~ 101 (358)
+...|+|+|| |.+|+.+|...+..|+ .+.|+|.++ . ++....+.+... -.+++
T Consensus 10 ~~~~V~ivGa-G~MGSGIAQv~a~sg~--~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~- 85 (298)
T KOG2304|consen 10 EIKNVAIVGA-GQMGSGIAQVAATSGL--NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIK- 85 (298)
T ss_pred cccceEEEcc-cccchhHHHHHHhcCC--ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHH-
Confidence 3458999998 9999999999999999 999999987 1 222222222110 01222
Q ss_pred EeCCCcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 102 FLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 102 ~~~t~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
.++|.+.++.|||+||.. .-+|+.+.+++.+.+.+.|+..- |..||...+.- +.. ....
T Consensus 86 --~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~-il~tNTSSl~l---t~i-a~~~ 144 (298)
T KOG2304|consen 86 --TSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSST-ILATNTSSLSL---TDI-ASAT 144 (298)
T ss_pred --HcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccce-EEeecccceeH---HHH-Hhhc
Confidence 246888999999998876 48899999999999999996432 44688887543 111 1222
Q ss_pred CCCCCcEEEee
Q 018265 182 TYDPKRLLGVT 192 (358)
Q Consensus 182 ~~p~~kviG~t 192 (358)
-.+.++.|+.
T Consensus 145 -~~~srf~GlH 154 (298)
T KOG2304|consen 145 -QRPSRFAGLH 154 (298)
T ss_pred -cChhhhceee
Confidence 3467899984
No 69
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.27 E-value=3.1e-06 Score=73.34 Aligned_cols=94 Identities=26% Similarity=0.334 Sum_probs=62.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCC--CC------CeEEEEeCCCcHHhhhCCCCEEE
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--TN------AVVRGFLGQQQLEDALTGMDIVI 119 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~--~~------~~v~~~~~t~d~~~al~~aDiVI 119 (358)
||+|+|| |..|.++|..|..++. ++.|+++++.....+.-.+.. .. ..+.. ++|+++++++||+||
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~--~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~---t~dl~~a~~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGH--EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA---TTDLEEALEDADIII 74 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTE--EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE---ESSHHHHHTT-SEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc---ccCHHHHhCcccEEE
Confidence 8999998 9999999999999996 999999875221222222221 11 12332 579999999999999
Q ss_pred EcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEec
Q 018265 120 IPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLIS 163 (358)
Q Consensus 120 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 163 (358)
++. | ....+++++++..+- ++..+++++
T Consensus 75 iav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~~ 103 (157)
T PF01210_consen 75 IAV--P--------------SQAHREVLEQLAPYLKKGQIIISAT 103 (157)
T ss_dssp E-S-----------------GGGHHHHHHHHTTTSHTT-EEEETS
T ss_pred ecc--c--------------HHHHHHHHHHHhhccCCCCEEEEec
Confidence 974 2 344567788888776 445555544
No 70
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.24 E-value=1.9e-05 Score=74.86 Aligned_cols=118 Identities=21% Similarity=0.374 Sum_probs=77.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---hhH-----H-HHHhcCC-C--------CCeEEEEeCCCcH
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV-----T-ADISHMD-T--------NAVVRGFLGQQQL 108 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---~g~-----~-~dl~~~~-~--------~~~v~~~~~t~d~ 108 (358)
.||+|||+ |.+|..++..++..|. +++++|++.. .+. . .++.+.. . ...++. ++|+
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la~~g~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~---~~~~ 77 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCAVAGY--DVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITG---TTDL 77 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence 48999998 9999999999999987 9999998861 111 0 1111110 0 013332 4576
Q ss_pred HhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 109 EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 109 ~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
+++++||+||+++ ..+..+.+++.+.+.++++ +++| +||-..+-...+ ....+. +.+
T Consensus 78 -~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~l----a~~~~~-~~r 135 (282)
T PRK05808 78 -DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITEL----AAATKR-PDK 135 (282)
T ss_pred -HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHH----HHhhCC-Ccc
Confidence 5689999999984 3456777888888988885 6644 566666554222 232233 357
Q ss_pred EEEee
Q 018265 188 LLGVT 192 (358)
Q Consensus 188 viG~t 192 (358)
++|+.
T Consensus 136 ~ig~h 140 (282)
T PRK05808 136 VIGMH 140 (282)
T ss_pred eEEee
Confidence 87774
No 71
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.22 E-value=1e-05 Score=77.07 Aligned_cols=118 Identities=14% Similarity=0.257 Sum_probs=74.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHH--------Hh---cCCC---------CCeEEEEeCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTAD--------IS---HMDT---------NAVVRGFLGQ 105 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~d--------l~---~~~~---------~~~v~~~~~t 105 (358)
.||+|||+ |.+|..++..++..|. +|+++|+++ ......+ +. +... ..++. .+
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~---~~ 77 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGY--DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIR---TS 77 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcE---ee
Confidence 48999998 9999999999999988 999999986 1111111 11 1000 01122 23
Q ss_pred CcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCccHHHHHHHHHHhCCCC
Q 018265 106 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 106 ~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~t~~~~~~~~~~~~~p 184 (358)
+|+ +++++||+||.+. ..+..+.+++.+.+.++++ ++++ +||...+...- . ..... .
T Consensus 78 ~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~~~~~---l-a~~~~-~ 135 (291)
T PRK06035 78 TSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETII--ASNTSGIMIAE---I-ATALE-R 135 (291)
T ss_pred CCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeEE--EEcCCCCCHHH---H-HhhcC-C
Confidence 566 6789999999985 2235667777788888874 5644 46655544321 1 12212 2
Q ss_pred CCcEEEee
Q 018265 185 PKRLLGVT 192 (358)
Q Consensus 185 ~~kviG~t 192 (358)
+.|++|+.
T Consensus 136 ~~r~ig~h 143 (291)
T PRK06035 136 KDRFIGMH 143 (291)
T ss_pred cccEEEEe
Confidence 46788874
No 72
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.20 E-value=1.5e-05 Score=81.01 Aligned_cols=120 Identities=15% Similarity=0.159 Sum_probs=77.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCC---------------CCCeEEEEeCCCcHHh
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---------------TNAVVRGFLGQQQLED 110 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~---------------~~~~v~~~~~t~d~~~ 110 (358)
+|||+|||+ |.||..+|..|+..|...+++.+|+++.+ +..|.... ....++ .++|+++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~--v~~l~~g~~~~~e~gl~ell~~~~~~~l~---~t~~~~~ 74 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPR--IDAWNSDQLPIYEPGLDEVVKQCRGKNLF---FSTDVEK 74 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHH--HHHHHcCCCccCCCCHHHHHHHhhcCCEE---EEcCHHH
Confidence 489999998 99999999999988643489999998611 11121110 001132 3567888
Q ss_pred hhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEe--cCCCCccHHH
Q 018265 111 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI--SNPVNSTVPI 172 (358)
Q Consensus 111 al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNP~d~~t~~ 172 (358)
++++||++|++.+.|...+-...+ -.-++..+.+.++.|.++.++..+|+. |-|..+.-.+
T Consensus 75 ~i~~advi~I~V~TP~~~~g~~~~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt~~~ 137 (473)
T PLN02353 75 HVAEADIVFVSVNTPTKTRGLGAG-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI 137 (473)
T ss_pred HHhcCCEEEEEeCCCCCCCCCcCC-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChHHHH
Confidence 999999999999988743210000 012345567777777776654444443 6788765444
No 73
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=98.16 E-value=2.9e-05 Score=74.49 Aligned_cols=120 Identities=18% Similarity=0.115 Sum_probs=81.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chh--HHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG--VTADISHMDTNAVVRGF----LGQQQLEDALTGMD 116 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g--~~~dl~~~~~~~~v~~~----~~t~d~~~al~~aD 116 (358)
..++|+|+||+|+||+.++..|+++|+ +|+--=++. .+. +..+|.... .+++.+ .....+..|+++||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY--~V~gtVR~~~~~k~~~~L~~l~~a~--~~l~l~~aDL~d~~sf~~ai~gcd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY--TVRGTVRDPEDEKKTEHLRKLEGAK--ERLKLFKADLLDEGSFDKAIDGCD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC--EEEEEEcCcchhhhHHHHHhcccCc--ccceEEeccccccchHHHHHhCCC
Confidence 457999999999999999999999998 555444433 222 344555332 122222 22356789999999
Q ss_pred EEEEcCCCCCCCCC-CHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCcc
Q 018265 117 IVIIPAGVPRKPGM-TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 169 (358)
Q Consensus 117 iVIi~ag~~~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~ 169 (358)
.|+++|.-..-... .-.+++.-.++....+.+.+.++. ..+=+++|+....+
T Consensus 81 gVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv 133 (327)
T KOG1502|consen 81 GVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAV 133 (327)
T ss_pred EEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHh
Confidence 99999874322222 244678889999999999999886 44435566665443
No 74
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.15 E-value=2.5e-05 Score=78.90 Aligned_cols=170 Identities=13% Similarity=0.007 Sum_probs=98.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+.|||.|+||+|+||++++..|+..|. +|+.+|... ......+. . ..+.++.+... -...++.++|+||++|
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~--~V~~ld~~~~~~~~~~~~~--~-~~~~~~~i~~D-~~~~~l~~~D~ViHlA 191 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGD--SVIVVDNFFTGRKENVMHH--F-SNPNFELIRHD-VVEPILLEVDQIYHLA 191 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcC--EEEEEeCCCccchhhhhhh--c-cCCceEEEECC-ccChhhcCCCEEEEee
Confidence 348999999999999999999999887 889888643 11111111 1 11223332211 1234578999999999
Q ss_pred CCCC--CCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC-CCccH--HHHHHHHHHh-CCCCCCcEEEeeeccH
Q 018265 123 GVPR--KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTV--PIAAEVFKKV-GTYDPKRLLGVTMLDV 196 (358)
Q Consensus 123 g~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-~d~~t--~~~~~~~~~~-~~~p~~kviG~t~lds 196 (358)
+... ....+....+..|+....++++.+++.. ..+|+++.- +.--. ....+..+.. .-..+...++.+.+..
T Consensus 192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~a 269 (442)
T PLN02206 192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTA 269 (442)
T ss_pred eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHH
Confidence 7532 1122345677899999999999998765 356655432 11000 0000000000 0011134566666666
Q ss_pred HHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 197 VRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 197 ~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
.++...+.+..+++..-++ ..++|.+
T Consensus 270 E~~~~~y~~~~g~~~~ilR~~~vyGp~ 296 (442)
T PLN02206 270 ETLTMDYHRGANVEVRIARIFNTYGPR 296 (442)
T ss_pred HHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 6665556666776655544 3477754
No 75
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.14 E-value=4e-05 Score=72.65 Aligned_cols=167 Identities=15% Similarity=0.051 Sum_probs=98.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHHhcCCCCCeEEEEe----CCCcHHhhhCC--CCEE
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTNAVVRGFL----GQQQLEDALTG--MDIV 118 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---~g~~~dl~~~~~~~~v~~~~----~t~d~~~al~~--aDiV 118 (358)
||.|+||+|++|++++..|+..+...+++++|.... .....++... +.+..+. ...++.+++++ +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDN---PRYRFVKGDIGDRELVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccC---CCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence 589999999999999999988763338888886431 1111122211 1222221 12345566777 8999
Q ss_pred EEcCCCCCC--CCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC-----CccHHHHHHHHHHhCCCCCCcEEEe
Q 018265 119 IIPAGVPRK--PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV-----NSTVPIAAEVFKKVGTYDPKRLLGV 191 (358)
Q Consensus 119 Ii~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~-----d~~t~~~~~~~~~~~~~p~~kviG~ 191 (358)
|++++.... ........+..|+.....+++.+.+...+..++.+|... .....+ .......+...+|.
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~-----~e~~~~~~~~~Y~~ 152 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAF-----TETTPLAPSSPYSA 152 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCc-----CCCCCCCCCCchHH
Confidence 999875321 112334567889999999999998765555666554311 000000 01112334456777
Q ss_pred eeccHHHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 192 TMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 192 t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
+.....++...+++..+++..-++ ..++|..
T Consensus 153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 153 SKAASDHLVRAYHRTYGLPALITRCSNNYGPY 184 (317)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence 766666666667777777665554 3467753
No 76
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.13 E-value=8.4e-06 Score=80.33 Aligned_cols=169 Identities=15% Similarity=0.085 Sum_probs=99.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE--EeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG--FLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~--~~~t~d~~~al~~aDiVIi~a 122 (358)
+.|||+|+||+|+||++++..|...|. +|+.+|+.... . +........+.. .....++..+++++|+||++|
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~--~V~~v~r~~~~-~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 93 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGH--YIIASDWKKNE-H---MSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLA 93 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCC--EEEEEEecccc-c---cccccccceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence 557999999999999999999999887 99999975310 0 000000001110 000123445678999999998
Q ss_pred CCCCCCC---CCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC-CCccH-------HHHHHHHHHhCCCCCCcEEEe
Q 018265 123 GVPRKPG---MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTV-------PIAAEVFKKVGTYDPKRLLGV 191 (358)
Q Consensus 123 g~~~~~g---~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-~d~~t-------~~~~~~~~~~~~~p~~kviG~ 191 (358)
+.....+ ......+..|+.....+++.+++...+. +|++|.. +.--. .+ .+ .....+.+...+|.
T Consensus 94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~-~V~~SS~~vYg~~~~~~~~~~~-~E--~~~~p~~p~s~Yg~ 169 (370)
T PLN02695 94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKR-FFYASSACIYPEFKQLETNVSL-KE--SDAWPAEPQDAYGL 169 (370)
T ss_pred cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCE-EEEeCchhhcCCccccCcCCCc-Cc--ccCCCCCCCCHHHH
Confidence 7432111 1123346789999999999998776543 4444432 11000 00 00 00001334556777
Q ss_pred eeccHHHHHHHHHHHhCCCCCCCc-eEEEEecC
Q 018265 192 TMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (358)
Q Consensus 192 t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg 223 (358)
+.....++...+++..|++..-++ ..++|.++
T Consensus 170 sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 170 EKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 766676666667777888766664 45888754
No 77
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.13 E-value=5.9e-05 Score=72.11 Aligned_cols=114 Identities=18% Similarity=0.111 Sum_probs=73.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHHhcCC-CCCeEEEEe----CCCcHHhhhCCCCEEE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMD-TNAVVRGFL----GQQQLEDALTGMDIVI 119 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~-g~~~dl~~~~-~~~~v~~~~----~t~d~~~al~~aDiVI 119 (358)
.+||.|+||+|++|++++..|+..|. +++.++++... .....+.... ..+.+..+. ...++.++++++|+||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGY--TVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCC--EEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 36899999999999999999999987 88888776521 1112221110 011222221 1234667889999999
Q ss_pred EcCCCCCCC-CCCHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEe
Q 018265 120 IPAGVPRKP-GMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLI 162 (358)
Q Consensus 120 i~ag~~~~~-g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~ 162 (358)
++|+..... .....+.+..|+.....+.+.+.+. ... .++++
T Consensus 82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-~~v~~ 125 (322)
T PLN02662 82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVK-RVVVT 125 (322)
T ss_pred EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCC-EEEEc
Confidence 998753221 1222356788999999999998775 333 44544
No 78
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.08 E-value=1.6e-05 Score=81.49 Aligned_cols=121 Identities=22% Similarity=0.297 Sum_probs=78.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--c-hhH--H---H-HHhcCCC---------CCeEEEEeCCCc
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--T---A-DISHMDT---------NAVVRGFLGQQQ 107 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~-~g~--~---~-dl~~~~~---------~~~v~~~~~t~d 107 (358)
-.||+|||+ |.+|+.+|..++..|+ +++++|++. + .+. . + .+..... ..+++. ++|
T Consensus 5 ~~kV~VIGa-G~MG~gIA~~la~aG~--~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~~ 78 (503)
T TIGR02279 5 VVTVAVIGA-GAMGAGIAQVAASAGH--QVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIP---VTD 78 (503)
T ss_pred ccEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEE---eCC
Confidence 358999998 9999999999999998 999999986 1 111 0 0 1111100 122333 457
Q ss_pred HHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 108 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 108 ~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
+ +++++||+||.+. .++..+.+++...+.+++|... |+.||...+-..-++ .. ... +.+
T Consensus 79 ~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~-IlasnTStl~i~~iA---~~-~~~-p~r 137 (503)
T TIGR02279 79 L-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADT-IIASNTSSLSITAIA---AG-LAR-PER 137 (503)
T ss_pred H-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCe-EEEECCCCCCHHHHH---Hh-cCc-ccc
Confidence 7 5689999999984 4467778888888998885433 346777776543211 22 222 456
Q ss_pred EEEeee
Q 018265 188 LLGVTM 193 (358)
Q Consensus 188 viG~t~ 193 (358)
++|+..
T Consensus 138 ~~G~HF 143 (503)
T TIGR02279 138 VAGLHF 143 (503)
T ss_pred eEEEec
Confidence 777643
No 79
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.07 E-value=2.1e-05 Score=74.96 Aligned_cols=123 Identities=20% Similarity=0.343 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHH-----HHh----cCCC--------CCeEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA-----DIS----HMDT--------NAVVRGFLGQQ 106 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~-----dl~----~~~~--------~~~v~~~~~t~ 106 (358)
+.+||+|||+ |.+|..++..++..|. +|+++|++.. ..... .+. .... ...++. ++
T Consensus 3 ~~~kI~vIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~ 76 (292)
T PRK07530 3 AIKKVGVIGA-GQMGNGIAHVCALAGY--DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARIST---AT 76 (292)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEe---eC
Confidence 3469999998 9999999999999988 9999999761 11111 110 1110 012332 35
Q ss_pred cHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCC
Q 018265 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (358)
Q Consensus 107 d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~ 185 (358)
|+ +++++||+||++.. .+..+.+.+.+.+.+++ |++++ +||-..+-.. +. ..... .+
T Consensus 77 ~~-~~~~~aD~Vieavp--------------e~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~s---~l-a~~~~-~~ 134 (292)
T PRK07530 77 DL-EDLADCDLVIEAAT--------------EDETVKRKIFAQLCPVLKPEAIL--ATNTSSISIT---RL-ASATD-RP 134 (292)
T ss_pred CH-HHhcCCCEEEEcCc--------------CCHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHH---HH-HhhcC-Cc
Confidence 66 56899999999842 12344455666777776 56644 3555554421 11 22222 24
Q ss_pred CcEEEeeecc
Q 018265 186 KRLLGVTMLD 195 (358)
Q Consensus 186 ~kviG~t~ld 195 (358)
.+++|+..++
T Consensus 135 ~r~~g~h~~~ 144 (292)
T PRK07530 135 ERFIGIHFMN 144 (292)
T ss_pred ccEEEeeccC
Confidence 5677764433
No 80
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.05 E-value=7.9e-05 Score=70.40 Aligned_cols=163 Identities=17% Similarity=0.113 Sum_probs=107.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCC-CCeEEEEeCCCcHHhhh--CCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDT-NAVVRGFLGQQQLEDAL--TGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~-~~~v~~~~~t~d~~~al--~~aDiVIi~a 122 (358)
|+|.|+|++|+|||+.+..|++.|. +++.+|... -...+.+-....+ ..+++. ..-+.+.| ..-|.||+.|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~--~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D---~~~L~~vf~~~~idaViHFA 75 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH--EVVVLDNLSNGHKIALLKLQFKFYEGDLLD---RALLTAVFEENKIDAVVHFA 75 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC--eEEEEecCCCCCHHHhhhccCceEEecccc---HHHHHHHHHhcCCCEEEECc
Confidence 6899999999999999999999998 999999865 1112221111111 011111 01122222 4789999998
Q ss_pred CCCCCCCC---CHHhHHHHHHHHHHHHHHHHHhhCCCeEEEE-----ecCCCCccHHHHHHHHHHhCCCCCCcEEEeeec
Q 018265 123 GVPRKPGM---TRDDLFNINAGIVKTLCEGIAKCCPKAIVNL-----ISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTML 194 (358)
Q Consensus 123 g~~~~~g~---~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-----~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~l 194 (358)
+...- |+ .-+.+...|+--...+.+.+.+++.+-+|+- +.+|..+- + + +..-..+.+.+|-|.|
T Consensus 76 a~~~V-gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~P--I-~----E~~~~~p~NPYG~sKl 147 (329)
T COG1087 76 ASISV-GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSP--I-S----ETSPLAPINPYGRSKL 147 (329)
T ss_pred ccccc-chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcc--c-C----CCCCCCCCCcchhHHH
Confidence 75432 22 2467889999999999999999997765543 23555421 1 1 2223447789999999
Q ss_pred cHHHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 195 DVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 195 ds~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
-..++.+.+++..+.+..-++ +-+.|-|
T Consensus 148 m~E~iL~d~~~a~~~~~v~LRYFN~aGA~ 176 (329)
T COG1087 148 MSEEILRDAAKANPFKVVILRYFNVAGAC 176 (329)
T ss_pred HHHHHHHHHHHhCCCcEEEEEecccccCC
Confidence 999999999999886555443 3466644
No 81
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.03 E-value=1.8e-05 Score=81.15 Aligned_cols=121 Identities=21% Similarity=0.300 Sum_probs=77.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-c--hh--HHHH----Hh-cCC--------CCCeEEEEeCCCcH
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PG--VTAD----IS-HMD--------TNAVVRGFLGQQQL 108 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~--~g--~~~d----l~-~~~--------~~~~v~~~~~t~d~ 108 (358)
.||+|||+ |.+|+.+|..++..|+ +|+++|++. . .+ ...+ +. ... ...+++. ++|+
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~~~ 81 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAAQAGH--TVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRP---VEAL 81 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence 48999998 9999999999999998 999999986 1 11 1111 11 110 0112443 3566
Q ss_pred HhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 109 EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 109 ~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
+++++||+||.+. .++..+.+.+...+.+.+ |++++ +||-..+-..-+ ...... ++|
T Consensus 82 -~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~ail--asntStl~i~~l----a~~~~~-p~r 139 (507)
T PRK08268 82 -ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDCIL--ATNTSSLSITAI----AAALKH-PER 139 (507)
T ss_pred -HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHH----HhhcCC-ccc
Confidence 5688999999984 446677777778898887 56643 456555443211 222232 467
Q ss_pred EEEeeecc
Q 018265 188 LLGVTMLD 195 (358)
Q Consensus 188 viG~t~ld 195 (358)
++|+..++
T Consensus 140 ~~G~hff~ 147 (507)
T PRK08268 140 VAGLHFFN 147 (507)
T ss_pred EEEEeecC
Confidence 77774333
No 82
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.03 E-value=4.1e-05 Score=73.61 Aligned_cols=103 Identities=23% Similarity=0.269 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHH--------HHhcCCC---------CCeEEEEeCCCc
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA--------DISHMDT---------NAVVRGFLGQQQ 107 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~--------dl~~~~~---------~~~v~~~~~t~d 107 (358)
.+||+|||+ |.+|++++..|+..|+ +|+++|+++. ..... .+..... ..+++. ++|
T Consensus 2 ~~~V~VIG~-G~mG~~iA~~la~~G~--~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~---~~~ 75 (308)
T PRK06129 2 MGSVAIIGA-GLIGRAWAIVFARAGH--EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV---TDS 75 (308)
T ss_pred CcEEEEECc-cHHHHHHHHHHHHCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE---ECc
Confidence 358999998 9999999999999988 9999999761 11110 1211110 012332 467
Q ss_pred HHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCcc
Q 018265 108 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 169 (358)
Q Consensus 108 ~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~ 169 (358)
+.+++++||+|+.+.. .+....+.+...+.+.+++..++ .||-....
T Consensus 76 ~~~a~~~ad~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~ii-~ssts~~~ 122 (308)
T PRK06129 76 LADAVADADYVQESAP--------------ENLELKRALFAELDALAPPHAIL-ASSTSALL 122 (308)
T ss_pred HHHhhCCCCEEEECCc--------------CCHHHHHHHHHHHHHhCCCcceE-EEeCCCCC
Confidence 8888999999999842 12344444555676666544444 35544333
No 83
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.03 E-value=4.2e-05 Score=73.51 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=70.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
|||.|+||+|++|++++..|+..|. +|+.++++.... ..+.+... ..+.. .....++.++++++|+||++++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~--~V~~l~R~~~~~--~~l~~~~v-~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY--QVRCLVRNLRKA--SFLKEWGA-ELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcChHHh--hhHhhcCC-EEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 6999999999999999999999887 899888764211 11111110 11111 111235678899999999987532
Q ss_pred CCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
.. ...++...|......+++.+++.+-+ .+|.+|
T Consensus 76 ~~---~~~~~~~~~~~~~~~l~~aa~~~gvk-r~I~~S 109 (317)
T CHL00194 76 PS---DLYNAKQIDWDGKLALIEAAKAAKIK-RFIFFS 109 (317)
T ss_pred CC---CccchhhhhHHHHHHHHHHHHHcCCC-EEEEec
Confidence 11 12234566788888899988887644 455544
No 84
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.03 E-value=9.3e-05 Score=71.96 Aligned_cols=176 Identities=15% Similarity=0.078 Sum_probs=100.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEE----eCCCcHHhhhCC--CCEEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGF----LGQQQLEDALTG--MDIVII 120 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~----~~t~d~~~al~~--aDiVIi 120 (358)
+||.|+||+|++|++++..|+..+. ..++++|.....+....+........+... ....++++++++ +|+||+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETS-DAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCC-CEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 5899999999999999999998875 246677764321211222211001112111 111234556664 899999
Q ss_pred cCCCCCCC--CCCHHhHHHHHHHHHHHHHHHHHhhC-------CC-eEEEEecCCC-CccHHHHHHHHHHhCCCCCCcEE
Q 018265 121 PAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCC-------PK-AIVNLISNPV-NSTVPIAAEVFKKVGTYDPKRLL 189 (358)
Q Consensus 121 ~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~-a~viv~tNP~-d~~t~~~~~~~~~~~~~p~~kvi 189 (358)
+||..... .......+..|+.....+++.+.++. +. ..++.+|... .-...-....+.......+...+
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y 160 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY 160 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence 99864321 11235567889999999999987642 12 2455554321 10000000000011123345567
Q ss_pred EeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEecC
Q 018265 190 GVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (358)
Q Consensus 190 G~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg 223 (358)
|.+.+...++...+++.++++..-++ ..++|.+.
T Consensus 161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 88877777777778888887765554 56788653
No 85
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.03 E-value=3.1e-05 Score=73.38 Aligned_cols=167 Identities=17% Similarity=0.112 Sum_probs=100.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCC-CEEEEcCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-NAVVRGFLGQQQLEDALTGM-DIVIIPAGV 124 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~-~~~v~~~~~t~d~~~al~~a-DiVIi~ag~ 124 (358)
|+|.|+||+|++|++++..|++.|. +|+.+|.........+ .+... ...+.. .....+++++. |.||++++.
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~~~~~~d~~~---~~~~~~~~~~~~d~vih~aa~ 74 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGH--DVRGLDRLRDGLDPLL-SGVEFVVLDLTD---RDLVDELAKGVPDAVIHLAAQ 74 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCC--eEEEEeCCCccccccc-cccceeeecccc---hHHHHHHHhcCCCEEEEcccc
Confidence 3599999999999999999999887 9999997552111111 11100 001110 12234556777 999999886
Q ss_pred CCCCCCCH---HhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccH-H----HHHHHHHHhCCCCCCcEEEeeeccH
Q 018265 125 PRKPGMTR---DDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTV-P----IAAEVFKKVGTYDPKRLLGVTMLDV 196 (358)
Q Consensus 125 ~~~~g~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t-~----~~~~~~~~~~~~p~~kviG~t~lds 196 (358)
...++..+ .++...|+...++++++.++ +.-.+++. +......- . .+.+-. .+..| ...+|.+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~-~ss~~~~~~~~~~~~~~E~~--~~~~p-~~~Yg~sK~~~ 149 (314)
T COG0451 75 SSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVF-ASSVSVVYGDPPPLPIDEDL--GPPRP-LNPYGVSKLAA 149 (314)
T ss_pred CchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEE-eCCCceECCCCCCCCccccc--CCCCC-CCHHHHHHHHH
Confidence 65444322 34788999999999999998 33334444 32221110 0 001100 11122 22577777777
Q ss_pred HHHHHHHHHHhCCCCCCCc-eEEEEecCC
Q 018265 197 VRANTFVAEVLGLDPREVD-VPVVGGHAG 224 (358)
Q Consensus 197 ~R~~~~lA~~l~v~~~~v~-~~v~G~hg~ 224 (358)
.+.....++..|++..-++ ..++|....
T Consensus 150 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 150 EQLLRAYARLYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred HHHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence 7776666666778877776 468886544
No 86
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.02 E-value=2e-05 Score=75.01 Aligned_cols=99 Identities=20% Similarity=0.233 Sum_probs=63.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHH----HHHh-----cCCC--------CCeEEEEeCCCcH
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVT----ADIS-----HMDT--------NAVVRGFLGQQQL 108 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~----~dl~-----~~~~--------~~~v~~~~~t~d~ 108 (358)
.||+|||+ |.+|..+|..++..|. +|+++|+++. .... .++. .... ...++. ++++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 75 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF--QTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY---SLDL 75 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCcH
Confidence 48999998 9999999999999887 9999999861 1111 0110 0000 012332 4577
Q ss_pred HhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCC
Q 018265 109 EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVN 167 (358)
Q Consensus 109 ~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d 167 (358)
++++++||+||.+.. .+..+.+.+...+.+++ |++++ ++|...
T Consensus 76 ~~~~~~aD~Vi~avp--------------e~~~~k~~~~~~l~~~~~~~~il--~~~tSt 119 (288)
T PRK09260 76 KAAVADADLVIEAVP--------------EKLELKKAVFETADAHAPAECYI--ATNTST 119 (288)
T ss_pred HHhhcCCCEEEEecc--------------CCHHHHHHHHHHHHhhCCCCcEE--EEcCCC
Confidence 889999999999842 22445555666677776 45543 344444
No 87
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.02 E-value=6.5e-05 Score=75.89 Aligned_cols=178 Identities=14% Similarity=0.121 Sum_probs=103.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--c-hh------------HHHHH---hcCCCCCeEEEEeC
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PG------------VTADI---SHMDTNAVVRGFLG 104 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~-~g------------~~~dl---~~~~~~~~v~~~~~ 104 (358)
..+++||.|+||+|+||++++..|+..|. +|+++|... . .. ....+ .+.. ...++.+.+
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~~v~~ 120 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGY--EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS-GKEIELYVG 120 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeccccccccccccccccccccchHHHHHHHHHhh-CCcceEEEC
Confidence 34457999999999999999999999887 899998532 0 00 00001 1000 011222211
Q ss_pred ----CCcHHhhhC--CCCEEEEcCCCCCCC-CC-C---HHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec------CCCC
Q 018265 105 ----QQQLEDALT--GMDIVIIPAGVPRKP-GM-T---RDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS------NPVN 167 (358)
Q Consensus 105 ----t~d~~~al~--~aDiVIi~ag~~~~~-g~-~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t------NP~d 167 (358)
..+++++++ ++|+||++|+....+ .. + ....+..|+.....+++.+++++.+..++.++ +|-.
T Consensus 121 Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~ 200 (442)
T PLN02572 121 DICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNI 200 (442)
T ss_pred CCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCC
Confidence 123445565 489999998653211 11 1 12335679999999999999887655555443 2111
Q ss_pred ccH--HH-HHHHHHHh---CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEecC
Q 018265 168 STV--PI-AAEVFKKV---GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (358)
Q Consensus 168 ~~t--~~-~~~~~~~~---~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg 223 (358)
.+. ++ ..+..... .-..+...+|.+.+....+...+++.+|++..-++ +.|+|.+.
T Consensus 201 ~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 201 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 000 00 00000000 01234568999887777777788888888776664 56888754
No 88
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.02 E-value=0.00013 Score=77.35 Aligned_cols=181 Identities=14% Similarity=0.016 Sum_probs=101.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCC-Cc---HHhhh--CCCC
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQ-QQ---LEDAL--TGMD 116 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t-~d---~~~al--~~aD 116 (358)
+-+++||.|+||+|+||++++..|+..+...+|+.+|..........+......+.++.+.+. +| ...++ .++|
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D 82 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGID 82 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCC
Confidence 445689999999999999999999887433388989864311111111111011223332211 22 22222 6899
Q ss_pred EEEEcCCCCCCCC--CCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC-CCccHHHHH-HHHHHhCCCCCCcEEEee
Q 018265 117 IVIIPAGVPRKPG--MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTVPIAA-EVFKKVGTYDPKRLLGVT 192 (358)
Q Consensus 117 iVIi~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-~d~~t~~~~-~~~~~~~~~p~~kviG~t 192 (358)
+||++|+...... ....++...|+.....+++.+++.+.-..+|.+|.- +.-...--. .-........+...+|.+
T Consensus 83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~s 162 (668)
T PLN02260 83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSAT 162 (668)
T ss_pred EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHH
Confidence 9999998643211 123456688999999999999887533355555431 000000000 000000112234567777
Q ss_pred eccHHHHHHHHHHHhCCCCCCCc-eEEEEecC
Q 018265 193 MLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (358)
Q Consensus 193 ~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg 223 (358)
.+...++-..+++..+++..-++ ..|+|.+.
T Consensus 163 K~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 77777776666777777665554 56788654
No 89
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.99 E-value=4.3e-05 Score=73.40 Aligned_cols=101 Identities=22% Similarity=0.323 Sum_probs=62.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHH-Hh---cC----C----CCCeEEEEeCCCcHHhhhC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTAD-IS---HM----D----TNAVVRGFLGQQQLEDALT 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~d-l~---~~----~----~~~~v~~~~~t~d~~~al~ 113 (358)
+||+|||+ |.+|..++..|+..|. +|+++|.+. ......+ +. .. . ....++ .++|++++++
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~~~~~~ 78 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARKGL--QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIR---MEAGLAAAVS 78 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceE---EeCCHHHHhc
Confidence 58999998 9999999999998887 999999876 1111111 10 00 0 001122 2357777899
Q ss_pred CCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCC-CeEEEEecCCCCcc
Q 018265 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNST 169 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNP~d~~ 169 (358)
+||+||++.- .......++...+..+++ +++| +||...+-
T Consensus 79 ~aDlVi~av~--------------~~~~~~~~v~~~l~~~~~~~~ii--~s~tsg~~ 119 (311)
T PRK06130 79 GADLVIEAVP--------------EKLELKRDVFARLDGLCDPDTIF--ATNTSGLP 119 (311)
T ss_pred cCCEEEEecc--------------CcHHHHHHHHHHHHHhCCCCcEE--EECCCCCC
Confidence 9999999841 123445555566666664 5543 35555443
No 90
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=97.98 E-value=6.2e-05 Score=73.17 Aligned_cols=161 Identities=14% Similarity=0.088 Sum_probs=95.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCC-----CcHHhhhCCCCEEE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQ-----QQLEDALTGMDIVI 119 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~-~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t-----~d~~~al~~aDiVI 119 (358)
+|||.|+||+|++|++++..|+.. +. +|+.+|+... ...++... ..+..+.+. .++.++++++|+||
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~--~V~~~~r~~~--~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi 73 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDW--EVYGMDMQTD--RLGDLVNH---PRMHFFEGDITINKEWIEYHVKKCDVIL 73 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCC--eEEEEeCcHH--HHHHhccC---CCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence 369999999999999999999875 55 8999986431 11122111 122222111 12345678999999
Q ss_pred EcCCCCC--CCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC------C-ccHHHHHHHHHHhCC------CC
Q 018265 120 IPAGVPR--KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV------N-STVPIAAEVFKKVGT------YD 184 (358)
Q Consensus 120 i~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~------d-~~t~~~~~~~~~~~~------~p 184 (358)
++++... ............|+....++++..++.. ..+|.+|... + .+. + ..+. .+
T Consensus 74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~~----e---e~~~~~~~~~~~ 144 (347)
T PRK11908 74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEFD----P---EASPLVYGPINK 144 (347)
T ss_pred ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCcC----c---cccccccCcCCC
Confidence 9987532 2222334456778888889999888764 4566554321 1 010 0 0000 01
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
+...+|.+.....+....+++..|++..-++ +.++|.+
T Consensus 145 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 145 PRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG 183 (347)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence 2335666665555555666677787766665 4577854
No 91
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=97.96 E-value=7.3e-05 Score=71.33 Aligned_cols=103 Identities=24% Similarity=0.330 Sum_probs=64.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch-hHH--------HHHhcCCC--C----CeEEEEeCCCcHHhh
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVT--------ADISHMDT--N----AVVRGFLGQQQLEDA 111 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~-g~~--------~dl~~~~~--~----~~v~~~~~t~d~~~a 111 (358)
.||+|||+ |.+|+.++..++..|. +|+++|.+... ... .++.+... . ..+.....++++ ++
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~ 80 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGM--DVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNL-EE 80 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCH-HH
Confidence 58999998 9999999999999887 99999987611 111 01211100 0 011111123455 67
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCcc
Q 018265 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNST 169 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~ 169 (358)
+++||+||.+. .++..+...+...+.+++ |+++| +||-..+-
T Consensus 81 ~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~il--~s~tS~i~ 123 (295)
T PLN02545 81 LRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAIL--ASNTSSIS 123 (295)
T ss_pred hCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcEE--EECCCCCC
Confidence 89999999984 334566666667777766 56643 45555543
No 92
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.96 E-value=8.4e-05 Score=71.80 Aligned_cols=114 Identities=17% Similarity=0.223 Sum_probs=75.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchh--HHHHHhcCCCCCeEEEEe----CCCcHHhhhCCCCEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTNAVVRGFL----GQQQLEDALTGMDIV 118 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g--~~~dl~~~~~~~~v~~~~----~t~d~~~al~~aDiV 118 (358)
+.++|.|+||+|++|++++..|+..+...+|+++|.+.... ...++.. ..+..+. ...++.+++++.|+|
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~v~~Dl~d~~~l~~~~~~iD~V 78 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA----PCLRFFIGDVRDKERLTRALRGVDYV 78 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC----CcEEEEEccCCCHHHHHHHHhcCCEE
Confidence 34689999999999999999998875333889998765221 1111211 1222211 123456678899999
Q ss_pred EEcCCCCCCC--CCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 119 IIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 119 Ii~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
|++||....+ ..+..+.+..|+.....+++.+.+.... .+|++|
T Consensus 79 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~-~iV~~S 124 (324)
T TIGR03589 79 VHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVK-RVVALS 124 (324)
T ss_pred EECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 9999864322 2234567889999999999999876533 455554
No 93
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=97.96 E-value=9.5e-05 Score=71.83 Aligned_cols=176 Identities=15% Similarity=0.099 Sum_probs=100.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEE----eCCCcHHhhhC--CCCEEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGF----LGQQQLEDALT--GMDIVII 120 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~----~~t~d~~~al~--~aDiVIi 120 (358)
|||.|+||+|++|++++..|+..|.. .++.+|.....+....+........+..+ ....++.++++ ++|+||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCC-eEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 68999999999999999999987752 46667754311111111111001112111 11124455565 4899999
Q ss_pred cCCCCCC--CCCCHHhHHHHHHHHHHHHHHHHHhhC-------CC-eEEEEecCC-CCccHHHHH--------HHHHHhC
Q 018265 121 PAGVPRK--PGMTRDDLFNINAGIVKTLCEGIAKCC-------PK-AIVNLISNP-VNSTVPIAA--------EVFKKVG 181 (358)
Q Consensus 121 ~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~-a~viv~tNP-~d~~t~~~~--------~~~~~~~ 181 (358)
+|+.... ......+.+..|+.....+++.+.++. .. ..++.+|.. +.-....-- ..+....
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 9986421 112235678899999999999998752 12 245544332 111000000 0000111
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEecC
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg 223 (358)
.+.+...+|.+.....++-..+++.+|++..-++ ..|+|.+.
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~ 202 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH 202 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence 2345567888877777777778888888765554 45788653
No 94
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=97.95 E-value=7.1e-05 Score=76.72 Aligned_cols=103 Identities=14% Similarity=0.149 Sum_probs=67.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHH--------HhcC---CC--CCeEEEEeCCCcHHhhh
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTAD--------ISHM---DT--NAVVRGFLGQQQLEDAL 112 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~-g~~~d--------l~~~---~~--~~~v~~~~~t~d~~~al 112 (358)
+||+|||+ |.+|+.+|..++..|+ +|.++|++... ....+ +... .. ...++. ++|+++++
T Consensus 5 ~kIavIG~-G~MG~~iA~~la~~G~--~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~---~~~~~ea~ 78 (495)
T PRK07531 5 MKAACIGG-GVIGGGWAARFLLAGI--DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF---CASLAEAV 78 (495)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe---eCCHHHHh
Confidence 58999998 9999999999999998 99999998611 11101 1100 00 011332 45788899
Q ss_pred CCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccH
Q 018265 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTV 170 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t 170 (358)
++||+||.+. ..+..+.+++...+.+++|... ++.||...+..
T Consensus 79 ~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi~~ 121 (495)
T PRK07531 79 AGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA-LIGSSTSGFLP 121 (495)
T ss_pred cCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCH
Confidence 9999999874 2334556666667777775432 34677666553
No 95
>PLN02214 cinnamoyl-CoA reductase
Probab=97.93 E-value=0.00019 Score=69.86 Aligned_cols=170 Identities=16% Similarity=0.029 Sum_probs=98.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch---hHHHHHhcCCCCCeEEEEe----CCCcHHhhhCCCCEE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTNAVVRGFL----GQQQLEDALTGMDIV 118 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~---g~~~dl~~~~~~~~v~~~~----~t~d~~~al~~aDiV 118 (358)
.++|.|+||+|++|++++..|+..|. +|+.++++... .....+... ...+..+. ...++.++++++|+|
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~V 85 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGY--TVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAIDGCDGV 85 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHhcCCEE
Confidence 45899999999999999999999887 88888775421 111122211 11222211 123566788999999
Q ss_pred EEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCcc--H-----HHHHHHHHHhC--CCCCCcEE
Q 018265 119 IIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST--V-----PIAAEVFKKVG--TYDPKRLL 189 (358)
Q Consensus 119 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~--t-----~~~~~~~~~~~--~~p~~kvi 189 (358)
|++|+... ....+.+..|+.....+.+.+.+...+ .++++|.-..+- . ....+-.+... -..+...+
T Consensus 86 ih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~-r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y 161 (342)
T PLN02214 86 FHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVK-RVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWY 161 (342)
T ss_pred EEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHH
Confidence 99998542 234556788999999999999876544 444443321110 0 00001000000 00122345
Q ss_pred EeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEecC
Q 018265 190 GVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (358)
Q Consensus 190 G~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg 223 (358)
|.+.....++...+++..|++..-++ ..|+|.+.
T Consensus 162 ~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~ 196 (342)
T PLN02214 162 CYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPL 196 (342)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCC
Confidence 55555555666666677777665554 56888653
No 96
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.93 E-value=9.5e-05 Score=66.61 Aligned_cols=97 Identities=20% Similarity=0.308 Sum_probs=64.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
+|+++|+|+ |++|+.++..+...++ |+.+-..+..+.....-... .+.+.. . ..++|.+.||+||++. |
T Consensus 1 m~~~~i~Gt-GniG~alA~~~a~ag~--eV~igs~r~~~~~~a~a~~l--~~~i~~---~-~~~dA~~~aDVVvLAV--P 69 (211)
T COG2085 1 MMIIAIIGT-GNIGSALALRLAKAGH--EVIIGSSRGPKALAAAAAAL--GPLITG---G-SNEDAAALADVVVLAV--P 69 (211)
T ss_pred CcEEEEecc-ChHHHHHHHHHHhCCC--eEEEecCCChhHHHHHHHhh--cccccc---C-ChHHHHhcCCEEEEec--c
Confidence 578999998 9999999999999997 88888666522222211111 233443 2 2468999999999984 3
Q ss_pred CCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 018265 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (358)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 167 (358)
.+-+.++.+.++..-.+-+||-.|||.+
T Consensus 70 --------------~~a~~~v~~~l~~~~~~KIvID~tnp~~ 97 (211)
T COG2085 70 --------------FEAIPDVLAELRDALGGKIVIDATNPIE 97 (211)
T ss_pred --------------HHHHHhHHHHHHHHhCCeEEEecCCCcc
Confidence 2333444444444323667888899964
No 97
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.93 E-value=0.00011 Score=72.17 Aligned_cols=108 Identities=16% Similarity=0.268 Sum_probs=73.4
Q ss_pred cccccccccCCCCCCCCCEEEEEcCCCchHHHHHHHHHhCCC-----CcEEEEEeCCCc---hhHHHHHhcCC----C--
Q 018265 30 SSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNT---PGVTADISHMD----T-- 95 (358)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~-----~~el~L~D~~~~---~g~~~dl~~~~----~-- 95 (358)
+++|.|..|++. ||+|||+ |.-|.++|..|..++. ..++.|+.+++. ...+.++++.. +
T Consensus 1 ~~~~~~~~~~~~------ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp 73 (365)
T PTZ00345 1 RSLFQKLRCGPL------KVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLP 73 (365)
T ss_pred CcchhhcccCCC------eEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCC
Confidence 468999989886 9999998 9999999999988762 238888887762 12344444321 1
Q ss_pred ----CCeEEEEeCCCcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHh--hC-CCeEEEEec
Q 018265 96 ----NAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAK--CC-PKAIVNLIS 163 (358)
Q Consensus 96 ----~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~--~~-p~a~viv~t 163 (358)
...+.. ++|+.+++++||+||++. | ...+++++++++. +- ++..+|.++
T Consensus 74 ~~~Lp~ni~~---tsdl~eav~~aDiIvlAV--P--------------sq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 74 GIKLPDNIVA---VSDLKEAVEDADLLIFVI--P--------------HQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred CCcCCCceEE---ecCHHHHHhcCCEEEEEc--C--------------hHHHHHHHHHhccccccCCCCEEEEEe
Confidence 122333 468889999999999873 2 3456677777765 33 344555554
No 98
>PRK06194 hypothetical protein; Provisional
Probab=97.93 E-value=0.00036 Score=65.61 Aligned_cols=160 Identities=19% Similarity=0.141 Sum_probs=92.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CC---cHHhhhC-----
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQ---QLEDALT----- 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~---d~~~al~----- 113 (358)
+.++|.|+||+|++|++++..|+..|. +|+++|.+. ......++... ...+..+.. -+ +++++++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM--KLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999887 899999865 22233333321 122322211 12 2333333
Q ss_pred --CCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHH----HHHHHHhhCCC-----eEEEEecCCCCccHHHHHHH
Q 018265 114 --GMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKT----LCEGIAKCCPK-----AIVNLISNPVNSTVPIAAEV 176 (358)
Q Consensus 114 --~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~----i~~~i~~~~p~-----a~viv~tNP~d~~t~~~~~~ 176 (358)
..|+||+++|..... ..+. ...+..|+..... +.+.+.+.+.+ +.+++++.-....
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------- 153 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL------- 153 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc-------
Confidence 469999999874321 1111 2234555554444 44445554432 5666655433211
Q ss_pred HHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 177 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 177 ~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.|..-.++.+......+...++..++.....+++..+.
T Consensus 154 -----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~ 192 (287)
T PRK06194 154 -----APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLC 192 (287)
T ss_pred -----CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEE
Confidence 234445677766555667777788887666666655554
No 99
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.88 E-value=0.00022 Score=69.22 Aligned_cols=156 Identities=13% Similarity=0.028 Sum_probs=92.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHHh-cCC--CCCeEEEEeC----CCcHHhhhCC--
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADIS-HMD--TNAVVRGFLG----QQQLEDALTG-- 114 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---~g~~~dl~-~~~--~~~~v~~~~~----t~d~~~al~~-- 114 (358)
+||.|+||+|++|++++..|+..|. +|+++|++.. ......+. +.. ....+..+.+ ...+.+++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY--EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC--EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 4899999999999999999999887 8999987641 11111111 000 0111222111 1234456664
Q ss_pred CCEEEEcCCCCCCC-C-CCHHhHHHHHHHHHHHHHHHHHhhC-CC-eEEEEecC------CCCccHHHHHHHHHHhCCCC
Q 018265 115 MDIVIIPAGVPRKP-G-MTRDDLFNINAGIVKTLCEGIAKCC-PK-AIVNLISN------PVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 115 aDiVIi~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~-p~-a~viv~tN------P~d~~t~~~~~~~~~~~~~p 184 (358)
.|+||++|+..... . ......+..|+.....+++.+.+.+ .+ ..++++|. +.+.. + .....+.
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~--~-----~E~~~~~ 151 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIP--Q-----NETTPFY 151 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCC--C-----CCCCCCC
Confidence 59999999864321 1 1123344667778888999888765 22 34554432 11110 0 1111234
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhCCCC
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLGLDP 211 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~v~~ 211 (358)
+...+|.+.+...++...+++.+|++.
T Consensus 152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~ 178 (343)
T TIGR01472 152 PRSPYAAAKLYAHWITVNYREAYGLFA 178 (343)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCce
Confidence 556788887777778777888777653
No 100
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.86 E-value=0.00046 Score=66.22 Aligned_cols=175 Identities=17% Similarity=0.087 Sum_probs=99.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHHhcC-CCCCeEEEE----eCCCcHHhhhCCCCEEE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM-DTNAVVRGF----LGQQQLEDALTGMDIVI 119 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~-g~~~dl~~~-~~~~~v~~~----~~t~d~~~al~~aDiVI 119 (358)
.++|.|+||+|++|++++..|+..|. +|++++++... .....+... .....+..+ ....+++++++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGY--TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 35899999999999999999999887 88777765421 111111111 101122222 11234567788999999
Q ss_pred EcCCCCCCC-CC-CHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHH---H-HHHHHHhCCC------CCCc
Q 018265 120 IPAGVPRKP-GM-TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPI---A-AEVFKKVGTY------DPKR 187 (358)
Q Consensus 120 i~ag~~~~~-g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~---~-~~~~~~~~~~------p~~k 187 (358)
++||..... .. .-...+..|+.....+.+.+.++.....|+++|.-....... . ...+...... ++..
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 162 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ 162 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence 999853211 11 224556789999999999888754223455544321110000 0 0000000001 1124
Q ss_pred EEEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 188 LLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 188 viG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
.+|.+.+...++...+++..|++..-++ +.++|..
T Consensus 163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~ 198 (325)
T PLN02989 163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI 198 (325)
T ss_pred chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence 6777777777776777777777665554 5678854
No 101
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.86 E-value=0.00025 Score=71.02 Aligned_cols=119 Identities=25% Similarity=0.325 Sum_probs=73.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCC----------------CCCeEEEEeCCCcHHh
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TNAVVRGFLGQQQLED 110 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~----------------~~~~v~~~~~t~d~~~ 110 (358)
|||+|||. |.+|..++..|+..|. +|+.+|++... ..++.... ....++. ++++.+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~--~V~~~d~~~~~--v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~---~~~~~~ 72 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGH--EVTGVDIDQEK--VDKLNKGKSPIYEPGLDELLAKALAAGRLRA---TTDYED 72 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCC--eEEEEECCHHH--HHHhhcCCCCCCCCCHHHHHHHhhhcCCeEE---ECCHHH
Confidence 68999998 9999999999999888 89999997521 12222210 0011332 357778
Q ss_pred hhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-cCCCCccHHHHHHHHHH
Q 018265 111 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI-SNPVNSTVPIAAEVFKK 179 (358)
Q Consensus 111 al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~~~~~~~~ 179 (358)
++++||+||++...|..... .-+...+.+.++.+.++. ++.++++. |-|......+...++.+
T Consensus 73 ~~~~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~ 137 (411)
T TIGR03026 73 AIRDADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILER 137 (411)
T ss_pred HHhhCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHh
Confidence 89999999999877654321 113344555555555543 45555444 45555554443333333
No 102
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.85 E-value=0.00039 Score=66.89 Aligned_cols=97 Identities=24% Similarity=0.375 Sum_probs=67.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcC--C--CCCeEE---EEeCCCcHHhhhCCCCEE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--D--TNAVVR---GFLGQQQLEDALTGMDIV 118 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~--~--~~~~v~---~~~~t~d~~~al~~aDiV 118 (358)
++||+|+|+ |.-|.++|..|..++. ++.|+.+++ ..+.++... . +.|.+. ....++|+.+++++||+|
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~--~V~lw~r~~--~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~i 75 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGH--EVRLWGRDE--EIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADII 75 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCC--eeEEEecCH--HHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEE
Confidence 479999998 9999999999999986 999998875 333334332 1 112111 122468999999999999
Q ss_pred EEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEec
Q 018265 119 IIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLIS 163 (358)
Q Consensus 119 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 163 (358)
|+.. | ...++++++++..+- ++..++.+|
T Consensus 76 v~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~s 105 (329)
T COG0240 76 VIAV--P--------------SQALREVLRQLKPLLLKDAIIVSAT 105 (329)
T ss_pred EEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEe
Confidence 9973 2 355666666665443 577777776
No 103
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.85 E-value=0.00014 Score=69.37 Aligned_cols=112 Identities=18% Similarity=0.208 Sum_probs=73.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
|||.|+||+|++|++++..|+..+. +++.+|++.... .++.+... ..+.. .....++.++++++|+||++++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~~~-~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE--EVRVLVRPTSDR--RNLEGLDV-EIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC--EEEEEEecCccc--cccccCCc-eEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 5899999999999999999998887 899999865211 11111110 01111 111134567788999999998753
Q ss_pred CCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 018265 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 164 (358)
.............|+.....+++.+.+..-. .+++.|.
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS 113 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVE-RVVYTSS 113 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEec
Confidence 2223345566788999999999988876433 4454443
No 104
>PLN02778 3,5-epimerase/4-reductase
Probab=97.80 E-value=0.00035 Score=66.75 Aligned_cols=90 Identities=20% Similarity=0.161 Sum_probs=62.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh--CCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL--TGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al--~~aDiVIi~a 122 (358)
+.|||.|+||+|++|++++..|...|. ++++...+. .+. ..+..++ .++|+||++|
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~--~V~~~~~~~--------~~~------------~~v~~~l~~~~~D~ViH~A 65 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGI--DFHYGSGRL--------ENR------------ASLEADIDAVKPTHVFNAA 65 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCC--EEEEecCcc--------CCH------------HHHHHHHHhcCCCEEEECC
Confidence 457999999999999999999998887 665442211 100 0011222 2789999999
Q ss_pred CCCCCCC-----CCHHhHHHHHHHHHHHHHHHHHhhCCC
Q 018265 123 GVPRKPG-----MTRDDLFNINAGIVKTLCEGIAKCCPK 156 (358)
Q Consensus 123 g~~~~~g-----~~r~~~~~~N~~i~~~i~~~i~~~~p~ 156 (358)
+....+. ....+....|+.....+++..++....
T Consensus 66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~ 104 (298)
T PLN02778 66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV 104 (298)
T ss_pred cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8643221 234567889999999999999987543
No 105
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.80 E-value=0.00025 Score=69.14 Aligned_cols=173 Identities=17% Similarity=0.071 Sum_probs=97.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhH--HHHHhcCCCCCeEEEEeC----CCcHHhhhCCCCEEE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV--TADISHMDTNAVVRGFLG----QQQLEDALTGMDIVI 119 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~--~~dl~~~~~~~~v~~~~~----t~d~~~al~~aDiVI 119 (358)
.|||.|+||+|++|++++..|+..|. +|++++.+..... ..++.. ...+..+.. ..++.+++++.|+||
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGY--TVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 57999999999999999999999887 8888876542111 112211 122332211 123456678999999
Q ss_pred EcCCCCCCC---C-CCH-----HhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC-CCccH-------HHHHHH----HH
Q 018265 120 IPAGVPRKP---G-MTR-----DDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-VNSTV-------PIAAEV----FK 178 (358)
Q Consensus 120 i~ag~~~~~---g-~~r-----~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-~d~~t-------~~~~~~----~~ 178 (358)
++|+..... . .+- ...+..|+.....+++.+.++..-..++++|.- +.... ....+- ..
T Consensus 85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~ 164 (353)
T PLN02896 85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPID 164 (353)
T ss_pred ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHH
Confidence 999864211 1 111 223344567788888888766322345554431 11000 000000 00
Q ss_pred H-hCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEecC
Q 018265 179 K-VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHA 223 (358)
Q Consensus 179 ~-~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~hg 223 (358)
. ....++...+|.+.+...++...+++..|++..-++ ..|+|.+.
T Consensus 165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~ 211 (353)
T PLN02896 165 HVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFL 211 (353)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCc
Confidence 0 000112236888877777777778888887665554 45778643
No 106
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.79 E-value=6.4e-05 Score=59.12 Aligned_cols=94 Identities=19% Similarity=0.243 Sum_probs=59.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhCC-CCcEEEEE-eCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINP-LVSVLHLY-DVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~-~~~el~L~-D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
||+|||+ |.+|++++..+...+ ...++.++ +++. ....++.+.. . +..+ +.+..+++++||+||++.-
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~--~~~~~~~~~~-~--~~~~--~~~~~~~~~~advvilav~-- 70 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSP--EKAAELAKEY-G--VQAT--ADDNEEAAQEADVVILAVK-- 70 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSH--HHHHHHHHHC-T--TEEE--SEEHHHHHHHTSEEEE-S---
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcH--HHHHHHHHhh-c--cccc--cCChHHhhccCCEEEEEEC--
Confidence 7999998 999999999999887 23488866 7754 2222332211 1 1121 2256799999999999852
Q ss_pred CCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 018265 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165 (358)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 165 (358)
| ..+.++++.+....++..+|-++||
T Consensus 71 --p------------~~~~~v~~~i~~~~~~~~vis~~ag 96 (96)
T PF03807_consen 71 --P------------QQLPEVLSEIPHLLKGKLVISIAAG 96 (96)
T ss_dssp --G------------GGHHHHHHHHHHHHTTSEEEEESTT
T ss_pred --H------------HHHHHHHHHHhhccCCCEEEEeCCC
Confidence 1 2344555555434467778777775
No 107
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.78 E-value=0.00031 Score=67.67 Aligned_cols=114 Identities=20% Similarity=0.210 Sum_probs=70.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCC-CCCe-EEE-EeCCCcHHhhhC--CCCEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TNAV-VRG-FLGQQQLEDALT--GMDIVI 119 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~-~~~~-v~~-~~~t~d~~~al~--~aDiVI 119 (358)
|||.|+||+|++|++++..|+..+. +|+++|... .......+.+.. .... +.. .....++.++++ ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 6899999999999999999998887 888888643 111111122111 0111 111 101112334454 689999
Q ss_pred EcCCCCCCC--CCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 120 IPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 120 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
++++..... .....+.+..|+.....+++.+++.... .++++|
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 123 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK-NLIFSS 123 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence 998764311 1234567788999999999998876433 344444
No 108
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.78 E-value=0.0003 Score=69.90 Aligned_cols=114 Identities=18% Similarity=0.255 Sum_probs=67.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCC------------CCeEEEEeCCCcHHhhhCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------------NAVVRGFLGQQQLEDALTG 114 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~------------~~~v~~~~~t~d~~~al~~ 114 (358)
|||+|||. |.||..+|..++. |+ +++.+|+++. .+..+..... ....+. ..++|.+++.++
T Consensus 1 mkI~VIGl-GyvGl~~A~~lA~-G~--~VigvD~d~~--kv~~l~~g~~~~~e~~l~~~l~~~~~~l-~~t~~~~~~~~~ 73 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLIAQ-NH--EVVALDILPS--RVAMLNDRISPIVDKEIQQFLQSDKIHF-NATLDKNEAYRD 73 (388)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CC--cEEEEECCHH--HHHHHHcCCCCCCCcCHHHHHHhCCCcE-EEecchhhhhcC
Confidence 69999998 9999999977774 66 9999999861 1111222100 011122 224566788899
Q ss_pred CCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEE-ecCCCCccHHH
Q 018265 115 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNL-ISNPVNSTVPI 172 (358)
Q Consensus 115 aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNP~d~~t~~ 172 (358)
||+||++...|....... -++..+.+.++.|.+..|+.+|++ .|-|....-.+
T Consensus 74 ad~vii~Vpt~~~~k~~~-----~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l 127 (388)
T PRK15057 74 ADYVIIATPTDYDPKTNY-----FNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAM 127 (388)
T ss_pred CCEEEEeCCCCCccCCCC-----cChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHH
Confidence 999999977663221111 133444455555554345554443 36777665444
No 109
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.77 E-value=0.00075 Score=64.74 Aligned_cols=175 Identities=16% Similarity=0.082 Sum_probs=95.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcC-CCCCeEEEEe----CCCcHHhhhCCCCEEE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTNAVVRGFL----GQQQLEDALTGMDIVI 119 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~-~~~~~v~~~~----~t~d~~~al~~aDiVI 119 (358)
.++|.|+||+|++|++++..|+..|. +|++...+. .......+... .....+..+. ...++.++++++|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGY--TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 35999999999999999999999887 777554443 21122222211 1111222221 1234667789999999
Q ss_pred EcCCCCCC-CCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCcc-H-------HHHHHHHHHhCCC--CCCcE
Q 018265 120 IPAGVPRK-PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST-V-------PIAAEVFKKVGTY--DPKRL 188 (358)
Q Consensus 120 i~ag~~~~-~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~-t-------~~~~~~~~~~~~~--p~~kv 188 (358)
++|+.... ......+++..|+.....+.+.+.+...-..||++|.-.... . ....+-.+..+.+ ++...
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 162 (322)
T PLN02986 83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNW 162 (322)
T ss_pred EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccc
Confidence 99985321 111223456778999999999887652112455443321110 0 0000000000000 11245
Q ss_pred EEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 189 LGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 189 iG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
++.+.....++...+++..|++..-++ ..++|..
T Consensus 163 Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~ 197 (322)
T PLN02986 163 YPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPL 197 (322)
T ss_pred hHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCC
Confidence 666655555666666666777665554 4677753
No 110
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.75 E-value=0.00028 Score=68.35 Aligned_cols=162 Identities=15% Similarity=0.071 Sum_probs=93.0
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHHhcC--CCCCeEEEEe----CCCcHHhhh
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHM--DTNAVVRGFL----GQQQLEDAL 112 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---~g~~~dl~~~--~~~~~v~~~~----~t~d~~~al 112 (358)
++.+.+||.|+||+|++|++++..|+..|. +|+++|.+.. ......+... .....+..+. ...++.+++
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 79 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGY--EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWL 79 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHH
Confidence 566778999999999999999999999887 8999887541 1111111100 0011122211 112344556
Q ss_pred CC--CCEEEEcCCCCCCC-C-CCHHhHHHHHHHHHHHHHHHHHhhCCC----eEEEEecCC-CCccH--HHHHHHHHHhC
Q 018265 113 TG--MDIVIIPAGVPRKP-G-MTRDDLFNINAGIVKTLCEGIAKCCPK----AIVNLISNP-VNSTV--PIAAEVFKKVG 181 (358)
Q Consensus 113 ~~--aDiVIi~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~----a~viv~tNP-~d~~t--~~~~~~~~~~~ 181 (358)
++ .|+||++|+..... . ......+..|+.....+++.+.++... ..++++|.- +.-.. ++ ....
T Consensus 80 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~-----~E~~ 154 (340)
T PLN02653 80 DDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQ-----SETT 154 (340)
T ss_pred HHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCC-----CCCC
Confidence 54 59999999864321 1 122334567888889999998877643 244444311 10000 00 0001
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCC
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLD 210 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~ 210 (358)
.+.+...+|.+.....++...+++.++++
T Consensus 155 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~ 183 (340)
T PLN02653 155 PFHPRSPYAVAKVAAHWYTVNYREAYGLF 183 (340)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcCCe
Confidence 12345567887766667767777777753
No 111
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.74 E-value=0.00021 Score=68.66 Aligned_cols=99 Identities=20% Similarity=0.323 Sum_probs=64.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcC----C------CCCeEEEEeCCCcHHhhhCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----D------TNAVVRGFLGQQQLEDALTGM 115 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~----~------~~~~v~~~~~t~d~~~al~~a 115 (358)
+|||+|||+ |.+|+.++..|+..+. ++.++|+++.... .+... . ....+.. +++.++++++|
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 72 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGH--DVTLWARDPEQAA--EINADRENPRYLPGIKLPDNLRA---TTDLAEALADA 72 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHH--HHHHcCcccccCCCCcCCCCeEE---eCCHHHHHhCC
Confidence 479999998 9999999999999887 8999998752111 11111 0 0011222 34667788999
Q ss_pred CEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCc
Q 018265 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNS 168 (358)
Q Consensus 116 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~ 168 (358)
|+||++... ..+.++++.+..+. |+.+++..+|-++.
T Consensus 73 D~vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~~ 110 (325)
T PRK00094 73 DLILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIEP 110 (325)
T ss_pred CEEEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeecccC
Confidence 999998521 12344445555553 67777777765543
No 112
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=97.74 E-value=0.00031 Score=66.89 Aligned_cols=160 Identities=11% Similarity=0.087 Sum_probs=89.3
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCc-HHhhh-----CCCCEEEEcC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQ-LEDAL-----TGMDIVIIPA 122 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d-~~~al-----~~aDiVIi~a 122 (358)
|.|+||+|++|++++..|+..|. ..+.++|..........+.+... .+... ..+ ++.++ .++|+||++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~-~d~~~---~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLDI-ADYMD---KEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHHHhhhhhhh-hhhhh---HHHHHHHHhcccccCCccEEEECc
Confidence 78999999999999999998875 24667786541111011111110 00000 011 12222 3799999998
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC------CccHHHHHHHHHHhCCCCCCcEEEeeeccH
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV------NSTVPIAAEVFKKVGTYDPKRLLGVTMLDV 196 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~------d~~t~~~~~~~~~~~~~p~~kviG~t~lds 196 (358)
+.+.............|+....++.+.+.+.. ..++..|... +... .......+...+|.+....
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~--~~~i~~SS~~vyg~~~~~~~-------~E~~~~~p~~~Y~~sK~~~ 147 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--IPFLYASSAATYGGRTDDFI-------EEREYEKPLNVYGYSKFLF 147 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcC--CcEEEEcchHHhCcCCCCCC-------ccCCCCCCCCHHHHHHHHH
Confidence 75433333344567889999999999998764 3455543321 1000 0111122334566666555
Q ss_pred HHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 197 VRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 197 ~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
.++...+++..+++..-++ ..++|..
T Consensus 148 E~~~~~~~~~~~~~~~~lR~~~vyG~~ 174 (308)
T PRK11150 148 DEYVRQILPEANSQICGFRYFNVYGPR 174 (308)
T ss_pred HHHHHHHHHHcCCCEEEEeeeeecCCC
Confidence 5555555555566555554 5678854
No 113
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.69 E-value=0.00062 Score=59.58 Aligned_cols=93 Identities=28% Similarity=0.323 Sum_probs=65.2
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCC----CcHHhhhCCCCEEEEcCCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQ----QQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t----~d~~~al~~aDiVIi~ag~ 124 (358)
|+|+||+|++|+.++..|+..+. +|.++-++..+ ..+ .+.++.+.+. .++.++++++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~--~V~~~~R~~~~--~~~------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH--EVTALVRSPSK--AED------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS--EEEEEESSGGG--HHH------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCC--EEEEEecCchh--ccc------ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 78999999999999999999996 99998876522 111 1223332221 3457889999999999865
Q ss_pred CCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
+.+ ....++.+++.+++.... .++++|
T Consensus 71 ~~~-----------~~~~~~~~~~a~~~~~~~-~~v~~s 97 (183)
T PF13460_consen 71 PPK-----------DVDAAKNIIEAAKKAGVK-RVVYLS 97 (183)
T ss_dssp TTT-----------HHHHHHHHHHHHHHTTSS-EEEEEE
T ss_pred hcc-----------cccccccccccccccccc-cceeee
Confidence 533 167888888888876543 444433
No 114
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.68 E-value=0.00017 Score=67.65 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=67.2
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCCCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKP 128 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~~~ 128 (358)
|.|+||+|++|++++..|+..+. +|+.++++...... +.. ..+..... .+..++++++|+||++++.+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~----~~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~ 71 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH--EVTILTRSPPAGAN--TKW----EGYKPWAP-LAESEALEGADAVINLAGEPIAD 71 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC--EEEEEeCCCCCCCc--ccc----eeeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence 57999999999999999998887 99999986521100 000 00111111 23357789999999999865432
Q ss_pred C----CCHHhHHHHHHHHHHHHHHHHHhhCC
Q 018265 129 G----MTRDDLFNINAGIVKTLCEGIAKCCP 155 (358)
Q Consensus 129 g----~~r~~~~~~N~~i~~~i~~~i~~~~p 155 (358)
+ .....+...|+...+.+++.+++...
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 102 (292)
T TIGR01777 72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQ 102 (292)
T ss_pred ccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence 2 12344567799999999999998764
No 115
>PLN02583 cinnamoyl-CoA reductase
Probab=97.67 E-value=0.001 Score=63.38 Aligned_cols=114 Identities=17% Similarity=0.113 Sum_probs=71.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch----hHHHHHhcCCCCCeEEEEe----CCCcHHhhhCCCCE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP----GVTADISHMDTNAVVRGFL----GQQQLEDALTGMDI 117 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~----g~~~dl~~~~~~~~v~~~~----~t~d~~~al~~aDi 117 (358)
..+|+|+||+|++|++++..|+..|. +|++++++... ....++... ...+..+. ...++.+++.++|.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~~~d~ 81 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGY--TVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALKGCSG 81 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHcCCCE
Confidence 35899999999999999999999987 88888764311 111222111 11222211 12345678999999
Q ss_pred EEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 118 VIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 118 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
|+..++.+........+.+..|+.....+.+.+.+..--..||++|
T Consensus 82 v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~S 127 (297)
T PLN02583 82 LFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTS 127 (297)
T ss_pred EEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence 9987654322111234567889999999999988763113455443
No 116
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.67 E-value=0.0002 Score=68.38 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=65.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCCEEEEcCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT--GMDIVIIPAGV 124 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~--~aDiVIi~ag~ 124 (358)
|||.|+||+|++|++++..|...+ +++.+|.... ....|+.+ ...+.++++ ++|+||++|+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~-~~~~Dl~d------------~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHST-DYCGDFSN------------PEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC---CEEEeccccc-cccCCCCC------------HHHHHHHHHhcCCCEEEECCcc
Confidence 689999999999999999998777 4677776421 00011111 112345555 58999999876
Q ss_pred CCCC--CCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 125 PRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 125 ~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
.... ..........|+.....+++..++.+ .+++.+|
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~S 103 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYS 103 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEc
Confidence 4211 12233445679999999999998865 3555544
No 117
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.65 E-value=0.00086 Score=63.77 Aligned_cols=102 Identities=19% Similarity=0.204 Sum_probs=62.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCC---CCeEEE-EeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---NAVVRG-FLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~---~~~v~~-~~~t~d~~~al~~aDiVIi~a 122 (358)
|||+|+|+ |.+|..++..|...|. ++.++|.+..... .+..... ...... ...+++.++ ++++|+||++.
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~ 74 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGH--DVTLVARRGAHLD--ALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAV 74 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECChHHHH--HHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEec
Confidence 68999998 9999999999998886 9999998541111 1111000 001110 112345544 49999999985
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCccH
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTV 170 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t 170 (358)
... -+.++++.+..+ .++..|+...|.++...
T Consensus 75 k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~ 107 (304)
T PRK06522 75 KAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLE 107 (304)
T ss_pred ccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHH
Confidence 321 123344444443 35678888899987654
No 118
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.65 E-value=0.00034 Score=60.93 Aligned_cols=65 Identities=17% Similarity=0.263 Sum_probs=46.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
++||++||. |.+|+.++..|...++ +|..||++. ....++.+.. .... .++.+++++||+||.+.
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~--~v~~~d~~~--~~~~~~~~~g----~~~~---~s~~e~~~~~dvvi~~v 65 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGY--EVTVYDRSP--EKAEALAEAG----AEVA---DSPAEAAEQADVVILCV 65 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT--EEEEEESSH--HHHHHHHHTT----EEEE---SSHHHHHHHBSEEEE-S
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCC--eEEeeccch--hhhhhhHHhh----hhhh---hhhhhHhhcccceEeec
Confidence 479999998 9999999999999998 999999864 2233344322 2332 46789999999999973
No 119
>PLN02253 xanthoxin dehydrogenase
Probab=97.64 E-value=0.0014 Score=61.45 Aligned_cols=148 Identities=19% Similarity=0.185 Sum_probs=83.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC----
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL-GQQQ---LEDALT---- 113 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al~---- 113 (358)
.+.+++.|+||+|.+|++++..|+..|. +|+++|.+.. .....++.. ...+..+. .-+| .+++++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~ 90 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGA--KVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVD 90 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHH
Confidence 4456899999999999999999999887 8999998652 112222321 11222211 1122 233333
Q ss_pred ---CCCEEEEcCCCCCCC-C----CC---HHhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHH
Q 018265 114 ---GMDIVIIPAGVPRKP-G----MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKK 179 (358)
Q Consensus 114 ---~aDiVIi~ag~~~~~-g----~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~ 179 (358)
..|++|+.+|..... + .+ -...+..|+.....+.+.+... ...+.+++++......
T Consensus 91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~---------- 160 (280)
T PLN02253 91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI---------- 160 (280)
T ss_pred HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc----------
Confidence 689999999864321 1 11 1234556655444444433322 1345666665533211
Q ss_pred hCCCCCCcEEEeeeccHHHHHHHHHHHhC
Q 018265 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 180 ~~~~p~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
+.+....+|.+......+.+.++..++
T Consensus 161 --~~~~~~~Y~~sK~a~~~~~~~la~e~~ 187 (280)
T PLN02253 161 --GGLGPHAYTGSKHAVLGLTRSVAAELG 187 (280)
T ss_pred --cCCCCcccHHHHHHHHHHHHHHHHHhh
Confidence 222234577766555667788888775
No 120
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.64 E-value=0.00066 Score=70.14 Aligned_cols=116 Identities=15% Similarity=0.077 Sum_probs=72.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhc-----CCC--CCeEEEEe----CCCcHHhh
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISH-----MDT--NAVVRGFL----GQQQLEDA 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~-----~~~--~~~v~~~~----~t~d~~~a 111 (358)
+...|.|+||+|++|+.++..|+..|. +|++++++.. .....++.. ... ...+..+. ...++.++
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~--~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 445899999999999999999998887 8898888752 112222211 000 01222221 11345567
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
+.++|+||+++|........-...+..|......+++.+.+..-. .||+++
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVg-RIV~VS 207 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVN-HFILVT 207 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCC-EEEEEc
Confidence 899999999988653221112233556778888888888776433 455554
No 121
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.63 E-value=0.00045 Score=66.42 Aligned_cols=79 Identities=22% Similarity=0.307 Sum_probs=59.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
.|||+|||+ |.+|.+++..|...|. +|.++|++.. .++++++++||+||++.-
T Consensus 4 ~m~I~iiG~-G~~G~~lA~~l~~~G~--~V~~~~r~~~----------------------~~~~~~~~~advvi~~vp-- 56 (308)
T PRK14619 4 PKTIAILGA-GAWGSTLAGLASANGH--RVRVWSRRSG----------------------LSLAAVLADADVIVSAVS-- 56 (308)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEeCCCC----------------------CCHHHHHhcCCEEEEECC--
Confidence 479999998 9999999999999987 9999997631 245678899999999842
Q ss_pred CCCCCCHHhHHHHHHHHHHHHHHHHHhh--CCCeEEEEecCC
Q 018265 126 RKPGMTRDDLFNINAGIVKTLCEGIAKC--CPKAIVNLISNP 165 (358)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP 165 (358)
...++++++.+..+ .++.+++..|+.
T Consensus 57 --------------~~~~~~v~~~l~~~~~~~~~ivi~~s~g 84 (308)
T PRK14619 57 --------------MKGVRPVAEQVQALNLPPETIIVTATKG 84 (308)
T ss_pred --------------hHHHHHHHHHHHHhcCCCCcEEEEeCCc
Confidence 12445555666543 467777777763
No 122
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.62 E-value=0.00082 Score=64.07 Aligned_cols=120 Identities=13% Similarity=0.161 Sum_probs=71.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCC-----CCCeEEE-EeCCCcHHhhhCCCCEEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-----TNAVVRG-FLGQQQLEDALTGMDIVII 120 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~-----~~~~v~~-~~~t~d~~~al~~aDiVIi 120 (358)
|||+|+|+ |.+|..++..|...+. ++.++++ .. ....+.+.. ....... ....+|.+++.+++|+||+
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~--~V~~~~r-~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vil 74 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGR--DVTFLVR-PK--RAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVIL 74 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCC--ceEEEec-HH--HHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEE
Confidence 69999998 9999999999999887 8999997 31 111122111 0001100 0112455565689999999
Q ss_pred cCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEE-eeecc
Q 018265 121 PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG-VTMLD 195 (358)
Q Consensus 121 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG-~t~ld 195 (358)
+.... -+.++++.+..+ .++..|+...|.++.... +.++ +|+.++++ ++...
T Consensus 75 avk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~-----l~~~--~~~~~v~~g~~~~~ 128 (305)
T PRK12921 75 AVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQ-----LEPY--FGRERVLGGVVFIS 128 (305)
T ss_pred Eeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHH-----HHHh--CCcccEEEEEEEEE
Confidence 85321 123344445443 356777788898875532 2332 56667764 44433
No 123
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.61 E-value=0.0005 Score=68.97 Aligned_cols=111 Identities=21% Similarity=0.199 Sum_probs=67.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCC----------------CCeEEEEeCCCc
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT----------------NAVVRGFLGQQQ 107 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~----------------~~~v~~~~~t~d 107 (358)
|+.+||+|||. |.+|..+|..|+..|. ++..+|+++..-.. +..... ...+.. +++
T Consensus 1 m~~~kI~VIGl-G~~G~~~A~~La~~G~--~V~~~D~~~~~v~~--l~~g~~~~~e~~l~~~l~~~~~~g~l~~---~~~ 72 (415)
T PRK11064 1 MSFETISVIGL-GYIGLPTAAAFASRQK--QVIGVDINQHAVDT--INRGEIHIVEPDLDMVVKTAVEGGYLRA---TTT 72 (415)
T ss_pred CCccEEEEECc-chhhHHHHHHHHhCCC--EEEEEeCCHHHHHH--HHCCCCCcCCCCHHHHHHHHhhcCceee---ecc
Confidence 34679999998 9999999999999987 99999998622111 221100 011111 222
Q ss_pred HHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-cCCCCccHHH
Q 018265 108 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI-SNPVNSTVPI 172 (358)
Q Consensus 108 ~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~ 172 (358)
+++||+||++...|..... ..++..+.+.++.|.++. ++.+||+- |.|....-.+
T Consensus 73 ----~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgtt~~~ 129 (415)
T PRK11064 73 ----PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGATEQM 129 (415)
T ss_pred ----cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCHHHHH
Confidence 3589999999887753321 113344555556666655 44554444 5676655443
No 124
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.61 E-value=0.0013 Score=60.69 Aligned_cols=158 Identities=16% Similarity=0.147 Sum_probs=85.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCcH---Hhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQL---EDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d~---~~al------ 112 (358)
+.++|.|+||+|.+|++++..|+..|. +|++++.++ ......++.+.. ..+..+.. -+|. ++++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA--AVAIADLNQDGANAVADEINKAG--GKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHhcC--ceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999988 899999876 222223343321 22222211 1222 2222
Q ss_pred -CCCCEEEEcCCCCCCC---C---CCHHhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 113 -TGMDIVIIPAGVPRKP---G---MTRDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~---g---~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
...|+||+++|..... . +.-...+..|+.. .+.+.+.+.+.++.+.++++|.-.. ..
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~------------~~ 149 (262)
T PRK13394 82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHS------------HE 149 (262)
T ss_pred cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhh------------cC
Confidence 3489999999864211 1 1122334456655 6666666633334455666543110 01
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.+....++.+......+-+.+++.+ .+..+++.++-
T Consensus 150 ~~~~~~~y~~sk~a~~~~~~~la~~~--~~~~i~v~~v~ 186 (262)
T PRK13394 150 ASPLKSAYVTAKHGLLGLARVLAKEG--AKHNVRSHVVC 186 (262)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHh--hhcCeEEEEEe
Confidence 23334456654433334455566654 23445544443
No 125
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.60 E-value=0.00045 Score=67.09 Aligned_cols=101 Identities=20% Similarity=0.189 Sum_probs=62.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCC------CCeE----EEEeCCCcHHhhhCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------NAVV----RGFLGQQQLEDALTGM 115 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~------~~~v----~~~~~t~d~~~al~~a 115 (358)
+|||+|||+ |.+|..++..|...|. +|.++|+++.. . .+..... .... ..+..+++. ++++++
T Consensus 2 ~mkI~IiG~-G~mG~~~A~~L~~~G~--~V~~~~r~~~~-~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 74 (341)
T PRK08229 2 MARICVLGA-GSIGCYLGGRLAAAGA--DVTLIGRARIG-D--ELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATA 74 (341)
T ss_pred CceEEEECC-CHHHHHHHHHHHhcCC--cEEEEecHHHH-H--HHHhcCceeecCCCcceecccceeEeccCh-hhccCC
Confidence 379999998 9999999999999887 89999975411 1 1111100 0000 001123455 678999
Q ss_pred CEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCcc
Q 018265 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNST 169 (358)
Q Consensus 116 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~ 169 (358)
|+||++...+. ..++++.+..+ .++.+|+..+|..+..
T Consensus 75 D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~ 113 (341)
T PRK08229 75 DLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA 113 (341)
T ss_pred CEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence 99999863221 12334444444 3567777778987654
No 126
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.60 E-value=0.0011 Score=66.81 Aligned_cols=112 Identities=15% Similarity=0.150 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCC------------CCeEEEEeCCCcHHhh
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------------NAVVRGFLGQQQLEDA 111 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~------------~~~v~~~~~t~d~~~a 111 (358)
.++|||+|||- |+||..+|..|+. ++ +++.||+++. .+.+|..... ...+. .+++. ++
T Consensus 4 ~~~mkI~vIGl-GyvGlpmA~~la~-~~--~V~g~D~~~~--~ve~l~~G~~~~~e~~~~~l~~~g~l~---~t~~~-~~ 73 (425)
T PRK15182 4 IDEVKIAIIGL-GYVGLPLAVEFGK-SR--QVVGFDVNKK--RILELKNGVDVNLETTEEELREARYLK---FTSEI-EK 73 (425)
T ss_pred CCCCeEEEECc-CcchHHHHHHHhc-CC--EEEEEeCCHH--HHHHHHCcCCCCCCCCHHHHHhhCCee---EEeCH-HH
Confidence 45689999998 9999999999876 45 9999999862 2233332211 00122 23454 57
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEE-ecCCCCccHH
Q 018265 112 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNL-ISNPVNSTVP 171 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv-~tNP~d~~t~ 171 (358)
+++||++|++.+.|..... . ..+.-+....+.|.++. +..+||+ .|-|......
T Consensus 74 ~~~advvii~Vptp~~~~~-~-----~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~ 129 (425)
T PRK15182 74 IKECNFYIITVPTPINTYK-Q-----PDLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEE 129 (425)
T ss_pred HcCCCEEEEEcCCCCCCCC-C-----cchHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHH
Confidence 8999999999988854321 1 12233333344454444 3344433 3666665543
No 127
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.60 E-value=0.00034 Score=68.28 Aligned_cols=100 Identities=18% Similarity=0.176 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcC----CCCC-------eEEEEeCCCcHHhhh
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DTNA-------VVRGFLGQQQLEDAL 112 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~----~~~~-------~v~~~~~t~d~~~al 112 (358)
.++|||+|+|+ |.+|+.++..|...+ +++++..++ ....++... ...+ .+. .++|+.+++
T Consensus 5 ~~~mkI~IiGa-Ga~G~alA~~La~~g---~v~l~~~~~--~~~~~i~~~~~~~~~l~~~~~l~~~i~---~t~d~~~a~ 75 (341)
T PRK12439 5 KREPKVVVLGG-GSWGTTVASICARRG---PTLQWVRSA--ETADDINDNHRNSRYLGNDVVLSDTLR---ATTDFAEAA 75 (341)
T ss_pred cCCCeEEEECC-CHHHHHHHHHHHHCC---CEEEEeCCH--HHHHHHHhcCCCcccCCCCcccCCCeE---EECCHHHHH
Confidence 35689999998 999999999999887 456777654 222223211 0111 222 246788889
Q ss_pred CCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCc
Q 018265 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNS 168 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~ 168 (358)
+++|+||++.- ...++++++++..+- ++..++.++|-.+.
T Consensus 76 ~~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~ 116 (341)
T PRK12439 76 NCADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQ 116 (341)
T ss_pred hcCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcC
Confidence 99999999842 234556666666543 56778888887764
No 128
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.59 E-value=0.00051 Score=66.42 Aligned_cols=98 Identities=15% Similarity=0.364 Sum_probs=63.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhc----CC------CCCeEEEEeCCCcHHhhh-CCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH----MD------TNAVVRGFLGQQQLEDAL-TGM 115 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~----~~------~~~~v~~~~~t~d~~~al-~~a 115 (358)
|||+|||| |.+|+.++..|...+. +|.++++++. .+..+.. .. ....++. ++|+.+++ .++
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~--~V~l~~r~~~--~~~~i~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~ 72 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKI--SVNLWGRNHT--TFESINTKRKNLKYLPTCHLPDNISV---KSAIDEVLSDNA 72 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEecCHH--HHHHHHHcCCCcccCCCCcCCCCeEE---eCCHHHHHhCCC
Confidence 68999998 9999999999999886 8999998652 2222221 10 0112333 35677776 589
Q ss_pred CEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHh-h-CCCeEEEEecCCCCc
Q 018265 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAK-C-CPKAIVNLISNPVNS 168 (358)
Q Consensus 116 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~-~p~a~viv~tNP~d~ 168 (358)
|+||++.- ..-+.++++.+.. + .++..++..+|=.+.
T Consensus 73 Dliiiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~~ 111 (326)
T PRK14620 73 TCIILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGIEK 111 (326)
T ss_pred CEEEEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCeeC
Confidence 99999842 2334445555554 3 367777777777644
No 129
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.0024 Score=58.90 Aligned_cols=38 Identities=32% Similarity=0.462 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
..+.++|.|+||+|.+|+.++..|+..|. +|++++++.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~--~V~~~~r~~ 45 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA--RVHVCDVSE 45 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 34567999999999999999999999887 899999865
No 130
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.54 E-value=0.00044 Score=66.58 Aligned_cols=123 Identities=15% Similarity=0.215 Sum_probs=72.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhc-----CCCCCeEEEEeCCCcHHhhhCCCCE
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-----MDTNAVVRGFLGQQQLEDALTGMDI 117 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~-----~~~~~~v~~~~~t~d~~~al~~aDi 117 (358)
++.+|||+|+|+ |.||..++..|...|. ++.+++++... +....- ......+......++. ++...+|+
T Consensus 2 ~~~~m~I~IiG~-GaiG~~lA~~L~~~g~--~V~~~~r~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~ 75 (313)
T PRK06249 2 DSETPRIGIIGT-GAIGGFYGAMLARAGF--DVHFLLRSDYE--AVRENGLQVDSVHGDFHLPPVQAYRSA-EDMPPCDW 75 (313)
T ss_pred CCcCcEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCHH--HHHhCCeEEEeCCCCeeecCceEEcch-hhcCCCCE
Confidence 456789999998 9999999999998887 89999886521 111110 0000011101111233 45788999
Q ss_pred EEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-eec
Q 018265 118 VIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TML 194 (358)
Q Consensus 118 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~l 194 (358)
||++.-... ..+.++.+... .|++.++...|=++..- .+.++ +|+.+|++- +..
T Consensus 76 vilavK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~~e-----~l~~~--~~~~~v~~g~~~~ 131 (313)
T PRK06249 76 VLVGLKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGVEE-----QLREI--LPAEHLLGGLCFI 131 (313)
T ss_pred EEEEecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCcHH-----HHHHH--CCCCcEEEEeeeE
Confidence 999853211 12233333332 37888888888877542 22333 677787654 443
No 131
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=97.51 E-value=0.00072 Score=66.02 Aligned_cols=96 Identities=21% Similarity=0.340 Sum_probs=61.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhCC------CCcEEEEEeCCC---chhHHHHHhcC--C--C------CCeEEEEeCCCcH
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINP------LVSVLHLYDVVN---TPGVTADISHM--D--T------NAVVRGFLGQQQL 108 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~------~~~el~L~D~~~---~~g~~~dl~~~--~--~------~~~v~~~~~t~d~ 108 (358)
||+|||+ |..|.++|..|..++ ...+|.|+.+++ .......++.. . + .+.++. ++|+
T Consensus 1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~a---t~dl 76 (342)
T TIGR03376 1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVA---VPDL 76 (342)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEE---ECCH
Confidence 6999998 999999999998876 123999998743 12222333221 1 1 112333 4689
Q ss_pred HhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEec
Q 018265 109 EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLIS 163 (358)
Q Consensus 109 ~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 163 (358)
++++++||+||++. | ...++++++++..+- ++..++.+|
T Consensus 77 ~eal~~ADiIIlAV--P--------------s~~i~~vl~~l~~~l~~~~~iVs~t 116 (342)
T TIGR03376 77 VEAAKGADILVFVI--P--------------HQFLEGICKQLKGHVKPNARAISCI 116 (342)
T ss_pred HHHHhcCCEEEEEC--C--------------hHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 99999999999973 2 345556666666543 344555554
No 132
>PLN02240 UDP-glucose 4-epimerase
Probab=97.51 E-value=0.0019 Score=62.48 Aligned_cols=116 Identities=19% Similarity=0.145 Sum_probs=71.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCC--CCCeEEEEe----CCCcHHhhhC--C
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMD--TNAVVRGFL----GQQQLEDALT--G 114 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~--~~~~v~~~~----~t~d~~~al~--~ 114 (358)
..+||.|+||+|++|++++..|+..+. +|+++|.... ......+.+.. ....++.+. ...++.++++ +
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 346999999999999999999998886 8999986431 11111111110 011122211 1123334444 6
Q ss_pred CCEEEEcCCCCCC-CC-CCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 115 MDIVIIPAGVPRK-PG-MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 115 aDiVIi~ag~~~~-~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
+|+||++++.... .. ......+..|+.....+++.+.+.... .++++|
T Consensus 82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 131 (352)
T PLN02240 82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCK-KLVFSS 131 (352)
T ss_pred CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEc
Confidence 8999999886421 11 234556788999999999988776433 344444
No 133
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0016 Score=60.28 Aligned_cols=117 Identities=21% Similarity=0.258 Sum_probs=65.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHHhcCCCCCeEEE-EeCCCcHHhhhC--------CC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRG-FLGQQQLEDALT--------GM 115 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~--g~~~dl~~~~~~~~v~~-~~~t~d~~~al~--------~a 115 (358)
++|.|+||+|.+|+.++..|+..|. +++++|.+... ....++..... ..+.. +....+.+++++ ..
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW--RVGAYDINEAGLAALAAELGAGNA-WTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCCce-EEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3699999999999999999999887 89999976521 11112221110 00111 111122233333 45
Q ss_pred CEEEEcCCCCCCCC---CC---HHhHHHHHHHHHHHHHHHHHh---hCCCeEEEEecCCC
Q 018265 116 DIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAK---CCPKAIVNLISNPV 166 (358)
Q Consensus 116 DiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~---~~p~a~viv~tNP~ 166 (358)
|+||+++|...... .+ -...+..|+.....+++.+.. ..+.+.+++++...
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~ 138 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSAS 138 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchh
Confidence 99999998753211 11 233456676655555555432 23455666665543
No 134
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0017 Score=68.50 Aligned_cols=106 Identities=14% Similarity=0.109 Sum_probs=66.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHh--CCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCC----------CcHHhhhCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKI--NPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQ----------QQLEDALTG 114 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~--~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t----------~d~~~al~~ 114 (358)
|||.|+||+|++|++++..|+. .+. +|..++++.......++........+..+.+. .++ +.+++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~~l~~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREA--TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADI-AELGD 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCC--EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHH-HHhcC
Confidence 6899999999999999999984 444 89999986522222222111000122221111 122 23489
Q ss_pred CCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCC
Q 018265 115 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPK 156 (358)
Q Consensus 115 aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~ 156 (358)
+|+||++|+... ......+....|+.....+++.+.+...+
T Consensus 78 ~D~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~ 118 (657)
T PRK07201 78 IDHVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERLQAA 118 (657)
T ss_pred CCEEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhcCCC
Confidence 999999988532 12334556678999999999998876433
No 135
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.47 E-value=0.0011 Score=64.29 Aligned_cols=97 Identities=21% Similarity=0.239 Sum_probs=61.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhc-------CCC-CCeEEEEeCCCcHHhhhCCCCE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-------MDT-NAVVRGFLGQQQLEDALTGMDI 117 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~-------~~~-~~~v~~~~~t~d~~~al~~aDi 117 (358)
+|||+|||+ |.+|..++..|+..|. +|.++|++........-.+ ... ...+.. +++++++++++|+
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~--~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~---~~~~~e~~~~aD~ 77 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGV--PVRLWARRPEFAAALAAERENREYLPGVALPAELYP---TADPEEALAGADF 77 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEE---eCCHHHHHcCCCE
Confidence 579999998 9999999999998887 8999998652211111111 000 011222 3567788899999
Q ss_pred EEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 018265 118 VIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (358)
Q Consensus 118 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 167 (358)
||++.-.. .++++.+.+ .|+.+++.++|..+
T Consensus 78 Vi~~v~~~----------------~~~~v~~~l---~~~~~vi~~~~Gi~ 108 (328)
T PRK14618 78 AVVAVPSK----------------ALRETLAGL---PRALGYVSCAKGLA 108 (328)
T ss_pred EEEECchH----------------HHHHHHHhc---CcCCEEEEEeeccc
Confidence 99984211 123333333 35667777788653
No 136
>PRK08643 acetoin reductase; Validated
Probab=97.46 E-value=0.0055 Score=56.46 Aligned_cols=156 Identities=18% Similarity=0.181 Sum_probs=84.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh-------C
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---LEDAL-------T 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~ 113 (358)
.++.|+||+|.+|.+++..|+..|. +++++|.+. ......++.+.. ..+..+.. -+| +.+++ .
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF--KVAIVDYNEETAQAAADKLSKDG--GKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3789999999999999999999887 899999875 222223343221 11211111 112 12222 3
Q ss_pred CCCEEEEcCCCCCC-CC--CC---HHhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 114 GMDIVIIPAGVPRK-PG--MT---RDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 114 ~aDiVIi~ag~~~~-~g--~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
+.|+||+++|.... +- .+ -...+..|+.. .+.+.+.+.+..+++.+++++...... +.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~ 146 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV------------GN 146 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc------------CC
Confidence 68999999986421 11 11 12234455544 334444444434456777776543221 23
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
|....++.+......+.+.++..+ .+..+++..+-
T Consensus 147 ~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v~~i~ 181 (256)
T PRK08643 147 PELAVYSSTKFAVRGLTQTAARDL--ASEGITVNAYA 181 (256)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHh--cccCcEEEEEe
Confidence 333345554433344556666665 34456554443
No 137
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.45 E-value=0.001 Score=63.02 Aligned_cols=64 Identities=20% Similarity=0.240 Sum_probs=45.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||+|||. |.+|.+++..|...+. +|.++|.+. ....+.+. .. +.. .+++. +++++||+||++.
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~--~V~~~d~~~~~~~~a~~~---g~---~~~--~~~~~-~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGH--TVYGVSRRESTCERAIER---GL---VDE--ASTDL-SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHC---CC---ccc--ccCCH-hHhcCCCEEEEcC
Confidence 68999998 9999999999998887 899999875 11112111 10 111 12344 5689999999985
No 138
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.44 E-value=0.00063 Score=63.91 Aligned_cols=95 Identities=22% Similarity=0.302 Sum_probs=66.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCC--CEEEEcCCCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGM--DIVIIPAGVP 125 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~a--DiVIi~ag~~ 125 (358)
||.|+||+|++|++++..|...|. ++++++... .|+.+ ..++.++++++ |+||++++..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~--~v~~~~r~~-----~d~~~------------~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR--VVVALTSSQ-----LDLTD------------PEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC--EEEEeCCcc-----cCCCC------------HHHHHHHHHhCCCCEEEECCccc
Confidence 689999999999999999998887 888887631 12211 12345667666 9999998864
Q ss_pred CCCC--CCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 126 RKPG--MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 126 ~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
.... .........|+.....+++.+.+... .++++|
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S 99 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA--RLVHIS 99 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence 3221 23445667889999999999887643 455544
No 139
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.44 E-value=0.00032 Score=65.72 Aligned_cols=112 Identities=15% Similarity=0.089 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~ 124 (358)
.++||+|+||+|||||+++-.|+..+. ++...|... .+....+++...++..+... ...-.--++.+|-|+++|..
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh--~VIa~Dn~f-tg~k~n~~~~~~~~~fel~~-hdv~~pl~~evD~IyhLAap 101 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGH--EVIALDNYF-TGRKENLEHWIGHPNFELIR-HDVVEPLLKEVDQIYHLAAP 101 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCC--eEEEEeccc-ccchhhcchhccCcceeEEE-eechhHHHHHhhhhhhhccC
Confidence 347999999999999999999999886 999999754 22223344443333322211 11113457999999998764
Q ss_pred CCCCC--CCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 018265 125 PRKPG--MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 162 (358)
Q Consensus 125 ~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~ 162 (358)
...++ .+-.+.+..|.-.........++. ++.++.+
T Consensus 102 asp~~y~~npvktIktN~igtln~lglakrv--~aR~l~a 139 (350)
T KOG1429|consen 102 ASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV--GARFLLA 139 (350)
T ss_pred CCCcccccCccceeeecchhhHHHHHHHHHh--CceEEEe
Confidence 32222 222233344433333333333333 2555554
No 140
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=97.43 E-value=0.001 Score=65.00 Aligned_cols=118 Identities=20% Similarity=0.234 Sum_probs=76.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHHhcCCCCCeEEEE----eCCCcHHhhhCCCCEEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGF----LGQQQLEDALTGMDIVI 119 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~dl~~~~~~~~v~~~----~~t~d~~~al~~aDiVI 119 (358)
++.+++|+||+|++|.+++..|.+.+...+|.++|.... ...-.|..... ...++.. ....+...|+.++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~-~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFR-SGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhccc-CCceeEEecchhhhhhhhhhccCc-eEE
Confidence 456999999999999999999999886669999998762 11111111111 1122221 1224567899999 777
Q ss_pred EcCCCC-CCCCC-CHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC
Q 018265 120 IPAGVP-RKPGM-TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 166 (358)
Q Consensus 120 i~ag~~-~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~ 166 (358)
+++..+ ....+ .|......|+...+.+.+...+.+-+ .+++|...
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~--~lIYtSs~ 127 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK--RLIYTSSA 127 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCC--EEEEecCc
Confidence 755432 12233 36666788999999999999987633 34444433
No 141
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.39 E-value=0.0063 Score=56.16 Aligned_cols=118 Identities=12% Similarity=0.147 Sum_probs=67.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh-------C
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---LEDAL-------T 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~ 113 (358)
.+|.|+||+|.+|++++..|++.|. +|+++|.+. ......++........+..+.. -+| .+.++ .
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY--RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3799999999999999999999887 899999865 2222222322110012222111 122 22222 3
Q ss_pred CCCEEEEcCCCCCCC---CCCHH---hHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCCC
Q 018265 114 GMDIVIIPAGVPRKP---GMTRD---DLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPV 166 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~---g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~ 166 (358)
..|+||+++|.+... ..... ..+..|+.- .+.+.+.+.+..+++.+++++...
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~ 143 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKS 143 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcc
Confidence 579999999865321 12222 223445443 455666665544456777766643
No 142
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0081 Score=54.93 Aligned_cols=116 Identities=18% Similarity=0.039 Sum_probs=67.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC----CCcHHhhh----CCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG----QQQLEDAL----TGMD 116 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~----t~d~~~al----~~aD 116 (358)
++|.|+||+|.+|..++..|+..|. +|+++|++. ......++.... ...+..+.. ..+.++.+ +..|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA--RLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 5899999999999999999999887 899999876 222223332211 122222211 11222222 3459
Q ss_pred EEEEcCCCCCC---CCCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 018265 117 IVIIPAGVPRK---PGMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNP 165 (358)
Q Consensus 117 iVIi~ag~~~~---~g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 165 (358)
+||+.+|.... .+.+. .+.+..|......+.+.+..+ ...+.++++|..
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 136 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSV 136 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 99998875321 12222 234566766656566555443 234566666543
No 143
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.39 E-value=0.0036 Score=58.81 Aligned_cols=163 Identities=17% Similarity=0.123 Sum_probs=94.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe----CCCcHHh-----
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL----GQQQLED----- 110 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~----~t~d~~~----- 110 (358)
+++++..++|+||++.+|..+|..|+.+|. .|+|+.+++ +...+.++++.. ...+..+. ...+.+.
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~--~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l 78 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLARRGY--NLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDEL 78 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHH
Confidence 356677999999999999999999999998 999999987 566667777543 12222211 1112211
Q ss_pred --hhCCCCEEEEcCCCCCCC------CCCHHhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHH
Q 018265 111 --ALTGMDIVIIPAGVPRKP------GMTRDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKK 179 (358)
Q Consensus 111 --al~~aDiVIi~ag~~~~~------g~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~ 179 (358)
..-..|+.|..||..... -.+-.+++.-|+-...++...+... .-.+.|||++.=.....
T Consensus 79 ~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p--------- 149 (265)
T COG0300 79 KERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP--------- 149 (265)
T ss_pred HhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC---------
Confidence 112689999999975322 1223456677766555555444432 23467787754332221
Q ss_pred hCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEEe
Q 018265 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGG 221 (358)
Q Consensus 180 ~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G~ 221 (358)
.|..-+++-|.---.-|...|...+ ....|++.++..
T Consensus 150 ---~p~~avY~ATKa~v~~fSeaL~~EL--~~~gV~V~~v~P 186 (265)
T COG0300 150 ---TPYMAVYSATKAFVLSFSEALREEL--KGTGVKVTAVCP 186 (265)
T ss_pred ---CcchHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEEec
Confidence 1222233333211222444444444 566677776663
No 144
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.39 E-value=0.00089 Score=60.60 Aligned_cols=168 Identities=17% Similarity=0.130 Sum_probs=95.7
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCC--CEEEEcCCCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALTGM--DIVIIPAGVP 125 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~~a--DiVIi~ag~~ 125 (358)
|.|+||+|++|++++..|+..+. +++-+............... . ..+.. .....++++++++. |.||++++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~-~-~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH--EVIVLSRSSNSESFEEKKLN-V-EFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT--EEEEEESCSTGGHHHHHHTT-E-EEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC--ccccccccccccccccccce-E-EEEEeeccccccccccccccCceEEEEeeccc
Confidence 78999999999999999999987 65544443322211111110 0 00000 01123456777777 9999999865
Q ss_pred C--CCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEeeeccHHHHHHHH
Q 018265 126 R--KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFV 203 (358)
Q Consensus 126 ~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~lds~R~~~~l 203 (358)
. .......+....|+...+.+.+.+.+... ..+++.+. ..+...-....+.....+.+...+|.+.....++...+
T Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~i~~sS-~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~ 154 (236)
T PF01370_consen 77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGV-KRFIFLSS-ASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDY 154 (236)
T ss_dssp SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEE-GGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccc-cccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 3 11134566788899999999999998876 45555443 21110000000000000112233566555566666777
Q ss_pred HHHhCCCCCCCc-eEEEEec
Q 018265 204 AEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 204 A~~l~v~~~~v~-~~v~G~h 222 (358)
+++.+++...++ ..++|.+
T Consensus 155 ~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 155 AKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHTSEEEEEEESEEESTT
T ss_pred cccccccccccccccccccc
Confidence 777787776665 4577765
No 145
>PLN02686 cinnamoyl-CoA reductase
Probab=97.39 E-value=0.0012 Score=65.03 Aligned_cols=178 Identities=13% Similarity=0.099 Sum_probs=97.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHHhcC---C-CCCeEEEEe----CCCcHHhhh
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM---D-TNAVVRGFL----GQQQLEDAL 112 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~-g~~~dl~~~---~-~~~~v~~~~----~t~d~~~al 112 (358)
...+.++|.|+||+|++|++++..|+..|. +|+++..+... ....++... . ....+..+. ...++.+++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~--~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i 126 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGY--SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAF 126 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence 346678999999999999999999999987 88765544311 111122110 0 001222211 112456778
Q ss_pred CCCCEEEEcCCCCCCCCC--CHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCC-Ccc--------HHHHHHHHH--
Q 018265 113 TGMDIVIIPAGVPRKPGM--TRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPV-NST--------VPIAAEVFK-- 178 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g~--~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~-d~~--------t~~~~~~~~-- 178 (358)
+++|.||++++.....+. ....+...|+....++.+.+.+. ..+ .+|.+|... .+. .....+-.+
T Consensus 127 ~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~-r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~ 205 (367)
T PLN02686 127 DGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVR-KCVFTSSLLACVWRQNYPHDLPPVIDEESWSD 205 (367)
T ss_pred HhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccHHHhcccccCCCCCCcccCCCCCCC
Confidence 999999998875322221 12344567889999999998875 233 444444321 000 000000000
Q ss_pred HhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 179 KVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 179 ~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
.....++...+|.+.+...++...+++..|++..-++ +.|+|..
T Consensus 206 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 206 ESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG 250 (367)
T ss_pred hhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence 0000111224566666666666666777777665554 5688864
No 146
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.38 E-value=0.0043 Score=56.92 Aligned_cols=115 Identities=16% Similarity=0.194 Sum_probs=65.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeC-CC---cHHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLG-QQ---QLEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~-t~---d~~~al------ 112 (358)
+..+|.|+||+|.+|++++..|+..|. ++++++++.. .....++.... ..+..+.. -+ ++.+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA--KVVIADLNDEAAAAAAEALQKAG--GKAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999887 8999998762 22223333211 12222111 11 222222
Q ss_pred -CCCCEEEEcCCCCCCCC---CC---HHhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 018265 113 -TGMDIVIIPAGVPRKPG---MT---RDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 164 (358)
.+.|+||+++|...... .+ -.+.+..|+.. ++.+.+.+++.. ...+++++.
T Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss 140 (258)
T PRK12429 79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMAS 140 (258)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence 36899999988642211 11 12233445444 666666666543 345555544
No 147
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.37 E-value=0.0062 Score=55.62 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+.++|.|+||+|.+|+.++..|++.|. +|++++++.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~--~V~~~~r~~ 39 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA--RVVVTDRNE 39 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 446999999999999999999999887 899999876
No 148
>PRK05717 oxidoreductase; Validated
Probab=97.37 E-value=0.0022 Score=59.26 Aligned_cols=155 Identities=15% Similarity=0.142 Sum_probs=87.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeC-CCc---HHhh-------hCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG-QQQ---LEDA-------LTG 114 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l~~ 114 (358)
.++|.|+||+|++|++++..|+..|. +++++|++....... ..+.. ..+..+.. -+| .+++ +..
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGW--QVVLADLDRERGSKV-AKALG--ENAWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHH-HHHcC--CceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 45899999999999999999998886 899999765221111 11111 11111111 112 1111 134
Q ss_pred CCEEEEcCCCCCCCC-----CC---HHhHHHHHHHHHHHHHHHHHhh--CCCeEEEEecCCCCccHHHHHHHHHHhCCCC
Q 018265 115 MDIVIIPAGVPRKPG-----MT---RDDLFNINAGIVKTLCEGIAKC--CPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 115 aDiVIi~ag~~~~~g-----~~---r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p 184 (358)
.|+||+.+|...... .+ -...+..|+.....+.+.+..+ ...+.+|++|.-.... +.+
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~------------~~~ 152 (255)
T PRK05717 85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ------------SEP 152 (255)
T ss_pred CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC------------CCC
Confidence 799999998653211 11 1245567777666666666543 1245666665433221 233
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
..-.+|.+......+...+++.++- .+++.++.
T Consensus 153 ~~~~Y~~sKaa~~~~~~~la~~~~~---~i~v~~i~ 185 (255)
T PRK05717 153 DTEAYAASKGGLLALTHALAISLGP---EIRVNAVS 185 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcC---CCEEEEEe
Confidence 3345677654445677788888752 25554443
No 149
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.35 E-value=0.0015 Score=63.51 Aligned_cols=100 Identities=24% Similarity=0.259 Sum_probs=66.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEE
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVII 120 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi 120 (358)
+.+..+|.|+||+|++|+.++..|....-..+|++++++. +.....++.+. . ..++++++.++|+||.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~----~------i~~l~~~l~~aDiVv~ 221 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGG----K------ILSLEEALPEADIVVW 221 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccc----c------HHhHHHHHccCCEEEE
Confidence 4556799999999999999999997643245899998764 22222222211 1 1256789999999999
Q ss_pred cCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccH
Q 018265 121 PAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTV 170 (358)
Q Consensus 121 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t 170 (358)
+++.+...-.+..++ .+..+++=++-|=|+-.
T Consensus 222 ~ts~~~~~~I~~~~l------------------~~~~~viDiAvPRDVd~ 253 (340)
T PRK14982 222 VASMPKGVEIDPETL------------------KKPCLMIDGGYPKNLDT 253 (340)
T ss_pred CCcCCcCCcCCHHHh------------------CCCeEEEEecCCCCCCc
Confidence 988764211111111 25577888899988863
No 150
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0082 Score=56.13 Aligned_cols=158 Identities=11% Similarity=0.079 Sum_probs=80.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEe-CCCcHHh---------hhC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL-GQQQLED---------ALT 113 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~t~d~~~---------al~ 113 (358)
...+.|+||+|.+|++++..|+..|. .|++++.+.. .....++.+......+..+. .-+|.++ .+.
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 80 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY--LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIG 80 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcC
Confidence 34689999999999999999999887 8999987651 11222222211111222221 1123211 123
Q ss_pred CCCEEEEcCCCCCCC--C-CC---HHhHHHHHHHHHHHHHHH----HHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 114 GMDIVIIPAGVPRKP--G-MT---RDDLFNINAGIVKTLCEG----IAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~--g-~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
..|+||+++|..... . .+ -.+.+..|......+.+. +++... +.+++++.-.... +.
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~vsS~~~~~------------~~ 147 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS-GKIINISSISGRV------------GF 147 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CEEEEECcccccC------------CC
Confidence 579999998864321 1 11 122345566554444444 444433 4455554322211 23
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+..-.++.+......+...++..+ .+..+++.++-
T Consensus 148 ~~~~~Y~~sK~~~~~~~~~l~~~~--~~~~i~v~~v~ 182 (280)
T PRK06914 148 PGLSPYVSSKYALEGFSESLRLEL--KPFGIDVALIE 182 (280)
T ss_pred CCCchhHHhHHHHHHHHHHHHHHh--hhhCCEEEEEe
Confidence 333445554433334555555443 23445544443
No 151
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.34 E-value=0.0047 Score=56.96 Aligned_cols=157 Identities=15% Similarity=0.107 Sum_probs=85.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CC---cHHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQ---QLEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~---d~~~al------ 112 (358)
+..+|.|+||+|.+|+.++..|+..|. +|++.|.++ ......++.+.. ..+..+.. -+ ++++++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA--EVILNGRDPAKLAAAAESLKGQG--LSAHALAFDVTDHDAVRAAIDAFEAE 84 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--ceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 345899999999999999999999887 899999876 222222333221 12221111 11 222222
Q ss_pred -CCCCEEEEcCCCCCC-C--CCC---HHhHHHHHHHHHHHHHHHHHhhC---CCeEEEEecCCCCccHHHHHHHHHHhCC
Q 018265 113 -TGMDIVIIPAGVPRK-P--GMT---RDDLFNINAGIVKTLCEGIAKCC---PKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP~d~~t~~~~~~~~~~~~ 182 (358)
...|+||+.+|.... + ..+ -...+..|+.....+++.+.++. ..+.++++|...... +
T Consensus 85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------~ 152 (255)
T PRK07523 85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL------------A 152 (255)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc------------C
Confidence 357999999886421 1 111 23345567665555555555432 345677766543211 2
Q ss_pred CCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 183 ~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
.+..-.++.+......+.+.++..++ +..+++.++
T Consensus 153 ~~~~~~y~~sK~a~~~~~~~~a~e~~--~~gi~v~~i 187 (255)
T PRK07523 153 RPGIAPYTATKGAVGNLTKGMATDWA--KHGLQCNAI 187 (255)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhh--HhCeEEEEE
Confidence 33333455554333445566666553 334544443
No 152
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.34 E-value=0.0046 Score=57.29 Aligned_cols=152 Identities=17% Similarity=0.157 Sum_probs=81.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------hC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQ---LEDA-------LT 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~ 113 (358)
|+|.|+||+|.+|..++..|+..|. ++++.|++. ......++.+.. .+..+. .-+| .+++ +.
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA--RVVISSRNEENLEKALKELKEYG---EVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC---CceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 6899999999999999999999987 899999875 222223343211 111111 1112 2222 24
Q ss_pred CCCEEEEcCCCCCC-C----CCCHHhH---HHHHH----HHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 114 GMDIVIIPAGVPRK-P----GMTRDDL---FNINA----GIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 114 ~aDiVIi~ag~~~~-~----g~~r~~~---~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
.-|++|+.+|.... + ..+..++ +..|+ -+.+.+.+.+.+....+.|+++|.-....
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~------------ 143 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE------------ 143 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC------------
Confidence 68999999986421 1 1122222 22232 23445555554333456777766433211
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVP 217 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~ 217 (358)
..|..-.++.+.-....+-+.+|+.++ +..|++.
T Consensus 144 ~~~~~~~y~~sKaa~~~~~~~la~e~~--~~gI~v~ 177 (259)
T PRK08340 144 PMPPLVLADVTRAGLVQLAKGVSRTYG--GKGIRAY 177 (259)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhC--CCCEEEE
Confidence 122223344443333456677777764 4455443
No 153
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0045 Score=56.94 Aligned_cols=156 Identities=13% Similarity=0.052 Sum_probs=85.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CC---cHHhhhC------
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQ---QLEDALT------ 113 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~---d~~~al~------ 113 (358)
..+|.|+||+|.+|+.++..|+..|. ++++++++. ......++.... ..+..+.. -+ +.+++++
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGA--KVVVADRDAAGGEETVALIREAG--GEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999998886 899999875 222223333221 12222111 11 2233333
Q ss_pred -CCCEEEEcCCCCCCC----CCCHH---hHHHHHHHHHHHH----HHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 114 -GMDIVIIPAGVPRKP----GMTRD---DLFNINAGIVKTL----CEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 114 -~aDiVIi~ag~~~~~----g~~r~---~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
.-|+||+.+|..... ..+.. ..+..|+.-...+ .+.+.+. ..+.+++++......
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~~~~~------------ 149 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGLG------------ 149 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhcc------------
Confidence 349999999864221 12222 2344565544333 3344332 235566665533211
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.+..-.++.+......+-..++..+. +..+++..+.
T Consensus 150 ~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~~i~ 186 (253)
T PRK06172 150 AAPKMSIYAASKHAVIGLTKSAAIEYA--KKGIRVNAVC 186 (253)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhc--ccCeEEEEEE
Confidence 233333455554334456677777763 4556665554
No 154
>PRK06182 short chain dehydrogenase; Validated
Probab=97.33 E-value=0.0055 Score=57.23 Aligned_cols=114 Identities=14% Similarity=0.107 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC-------CCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALT-------GMD 116 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~-------~aD 116 (358)
+.++|.|+||+|.+|..++..|+..|. +|++.+++... ..++..... ..+.. .+...+.+++++ +.|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~--l~~~~~~~~-~~~~~Dv~~~~~~~~~~~~~~~~~~~id 76 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY--TVYGAARRVDK--MEDLASLGV-HPLSLDVTDEASIKAAVDTIIAEEGRID 76 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHhCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 346899999999999999999998887 88999876511 112221111 11111 111122333333 789
Q ss_pred EEEEcCCCCCCC---CC---CHHhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 018265 117 IVIIPAGVPRKP---GM---TRDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 117 iVIi~ag~~~~~---g~---~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 164 (358)
+||+.+|..... .. .-...+..|... ++.+.+.+++... +.+++++.
T Consensus 77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-g~iv~isS 133 (273)
T PRK06182 77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS-GRIINISS 133 (273)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 999999864221 11 122334555533 5666666665543 45666654
No 155
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0041 Score=58.13 Aligned_cols=154 Identities=12% Similarity=0.013 Sum_probs=82.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeC-CCcH---Hhh-------hCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG-QQQL---EDA-------LTGM 115 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-t~d~---~~a-------l~~a 115 (358)
++|.|+||+|++|++++..|+..|. .+++++.+.. ...++.... ...+..+.. -+|. +++ +.+.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~--~v~~~~r~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD--RVAATVRRPD--ALDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHH--HHHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999887 8888887641 111221110 011221111 1222 222 2457
Q ss_pred CEEEEcCCCCCCCC-C--C---HHhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCC
Q 018265 116 DIVIIPAGVPRKPG-M--T---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (358)
Q Consensus 116 DiVIi~ag~~~~~g-~--~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~ 186 (358)
|+||+++|...... . + -...+..|+.....+++.+..+ ...+.++++|.-... .+.|..
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~ 145 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ------------IAYPGF 145 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc------------cCCCCC
Confidence 99999998653211 1 1 1234556777776777665322 223456665542211 123444
Q ss_pred cEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 187 RLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 187 kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
-.++.+......+...+++.+. +..+++.++
T Consensus 146 ~~Y~~sK~a~~~~~~~l~~~~~--~~gi~v~~v 176 (276)
T PRK06482 146 SLYHATKWGIEGFVEAVAQEVA--PFGIEFTIV 176 (276)
T ss_pred chhHHHHHHHHHHHHHHHHHhh--ccCcEEEEE
Confidence 4555554444445566666542 344544443
No 156
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0046 Score=58.01 Aligned_cols=145 Identities=11% Similarity=0.047 Sum_probs=78.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------CC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFL-GQQQ---LEDAL-------TG 114 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~ 114 (358)
.++|.|+||+|.+|++++..|+..|. +|++++++... ..++.... ...+..+. .-+| ..+++ ..
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~--~~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH--RVVGTVRSEAA--RADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC--EEEEEeCCHHH--HHHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 45799999999999999999999887 89999986521 11222211 11111111 1112 22222 25
Q ss_pred CCEEEEcCCCCCC---CCCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHhCCCCC
Q 018265 115 MDIVIIPAGVPRK---PGMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (358)
Q Consensus 115 aDiVIi~ag~~~~---~g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~ 185 (358)
.|+||+++|.... ...+. ...+..|+.-...+.+.+..+ ...+.+|++|.-.... +.|.
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~------------~~~~ 146 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI------------TMPG 146 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC------------CCCC
Confidence 8999999986421 11222 233566776666666554332 2234566665432221 2333
Q ss_pred CcEEEeeeccHHHHHHHHHHHh
Q 018265 186 KRLLGVTMLDVVRANTFVAEVL 207 (358)
Q Consensus 186 ~kviG~t~lds~R~~~~lA~~l 207 (358)
.-.++.+......+...++..+
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~ 168 (277)
T PRK06180 147 IGYYCGSKFALEGISESLAKEV 168 (277)
T ss_pred cchhHHHHHHHHHHHHHHHHHh
Confidence 3445554333334455556554
No 157
>PRK12320 hypothetical protein; Provisional
Probab=97.32 E-value=0.0019 Score=68.48 Aligned_cols=101 Identities=14% Similarity=0.074 Sum_probs=65.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~ 126 (358)
|||.|+||+|++|++++..|...|. +|..+|..... ..+.. ...+..-.....+.++++++|+||++++...
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~--~Vi~ldr~~~~-----~~~~~-ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~ 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH--TVSGIAQHPHD-----ALDPR-VDYVCASLRNPVLQELAGEADAVIHLAPVDT 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCChhh-----cccCC-ceEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence 6999999999999999999998887 89999875311 11100 0111110001134566789999999987531
Q ss_pred CCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 127 KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
.. ....|+....++++.+++.+. ++|++|
T Consensus 73 --~~----~~~vNv~Gt~nLleAA~~~Gv--RiV~~S 101 (699)
T PRK12320 73 --SA----PGGVGITGLAHVANAAARAGA--RLLFVS 101 (699)
T ss_pred --cc----hhhHHHHHHHHHHHHHHHcCC--eEEEEE
Confidence 11 124688888889998887653 455554
No 158
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0052 Score=55.78 Aligned_cols=115 Identities=17% Similarity=0.205 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeCC-C---cHHhhh-------
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQ-Q---QLEDAL------- 112 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~t-~---d~~~al------- 112 (358)
.++|+|+||+|.+|++++..|+..|. +|++++++.. .....++... ..+..+... + ++.+++
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAEGY--KVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999998877 8999998752 2222333321 112221111 1 222223
Q ss_pred CCCCEEEEcCCCCCCC---CCCHH---hHHHHHHHHHHHHHHHHHhh--CCCeEEEEecCC
Q 018265 113 TGMDIVIIPAGVPRKP---GMTRD---DLFNINAGIVKTLCEGIAKC--CPKAIVNLISNP 165 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~---g~~r~---~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP 165 (358)
.++|+||+++|..... ..+.. +.+..|+.....+.+.+.+. ...+.+++++..
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 3799999998754321 11222 23455555444444444332 134566666654
No 159
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.29 E-value=0.0019 Score=62.00 Aligned_cols=68 Identities=25% Similarity=0.259 Sum_probs=47.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+||+|||+ |.+|..++..|...+...+|.++|++... ...+.... ..... ..++++++++||+||++.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~--~~~a~~~g--~~~~~---~~~~~~~~~~aDvViiav 74 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAET--RARARELG--LGDRV---TTSAAEAVKGADLVILCV 74 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHH--HHHHHhCC--CCcee---cCCHHHHhcCCCEEEECC
Confidence 58999998 99999999999888765589999987521 11111111 11111 234567889999999985
No 160
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.007 Score=56.50 Aligned_cols=161 Identities=18% Similarity=0.098 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhhC----
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---LEDALT---- 113 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al~---- 113 (358)
++.++|.|+||+|.+|++++..|+..|. +|++++.+. ......++........+..+.. -+| .+..++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA--AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA 82 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3456999999999999999999999987 899999765 2222233322111112222111 112 222333
Q ss_pred ---CCCEEEEcCCCCCCC----CCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 114 ---GMDIVIIPAGVPRKP----GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 114 ---~aDiVIi~ag~~~~~----g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
..|+||+.+|..... ..+. ...+..|......+.+.+.++ ...+.++++|.....
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~------------ 150 (276)
T PRK05875 83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS------------ 150 (276)
T ss_pred HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc------------
Confidence 689999998853211 1121 223445655555555444332 234566666543211
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
.+.|..-.++.+......+...+++.++ ...+++.++.
T Consensus 151 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~~i~ 188 (276)
T PRK05875 151 NTHRWFGAYGVTKSAVDHLMKLAADELG--PSWVRVNSIR 188 (276)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEEEEe
Confidence 1123333455554444556667776664 4556665554
No 161
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.01 Score=55.56 Aligned_cols=160 Identities=15% Similarity=0.147 Sum_probs=89.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---------hhHHHHHhcCCCCCeEEEE----eCCCcHHhh
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTNAVVRGF----LGQQQLEDA 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---------~g~~~dl~~~~~~~~v~~~----~~t~d~~~a 111 (358)
+..++.|+||+|.+|++++..|+..|. +|++++++.. .....++.... ..+..+ +...+.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~ 80 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA--NIVIAAKTAEPHPKLPGTIHTAAEEIEAAG--GQALPLVGDVRDEDQVAAA 80 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecccccccchhhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHH
Confidence 345899999999999999999999887 8999997641 11122232211 111111 111122233
Q ss_pred hC-------CCCEEEEcCCCCCC-C--CCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHH
Q 018265 112 LT-------GMDIVIIPAGVPRK-P--GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAE 175 (358)
Q Consensus 112 l~-------~aDiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~ 175 (358)
++ ..|+||+++|.... + ..+. ...+..|+.-...+++.+..+ ...+.+++++.+....
T Consensus 81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------ 154 (273)
T PRK08278 81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD------ 154 (273)
T ss_pred HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc------
Confidence 32 67999999986321 1 1222 223445555444444444322 2346677766543221
Q ss_pred HHHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 176 VFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 176 ~~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
...++....++.+.....++...++..++ +..|++..+.
T Consensus 155 ----~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v~~i~ 193 (273)
T PRK08278 155 ----PKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIAVNALW 193 (273)
T ss_pred ----ccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEEe
Confidence 01124445677776666677888888875 3556655554
No 162
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.28 E-value=0.0024 Score=64.48 Aligned_cols=66 Identities=24% Similarity=0.346 Sum_probs=47.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||+||||.|.+|..++..|...|. ++.++|.+.... .++.... .+.. +++..+++.+||+||++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~--~V~v~~r~~~~~--~~~a~~~---gv~~---~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF--EVIVTGRDPKKG--KEVAKEL---GVEY---ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC--EEEEEECChHHH--HHHHHHc---CCee---ccCHHHHhccCCEEEEec
Confidence 6899998569999999999998887 899999875221 1111110 1111 346678899999999985
No 163
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0095 Score=54.27 Aligned_cols=118 Identities=17% Similarity=0.249 Sum_probs=67.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhH----HHHHhcCCCCCeEEEEeC-CCc---HHhhh--
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV----TADISHMDTNAVVRGFLG-QQQ---LEDAL-- 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~----~~dl~~~~~~~~v~~~~~-t~d---~~~al-- 112 (358)
+.++|.|+||+|++|++++..|+..|. ++++++... .... ..++.... ..+..+.. -+| .+.++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~ 80 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA--DVIVLDIHPMRGRAEADAVAAGIEAAG--GKALGLAFDVRDFAATRAALDA 80 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEcCcccccHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHH
Confidence 457999999999999999999999887 888887643 1111 11222111 12222111 112 22222
Q ss_pred -----CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHHHHh----hCCCeEEEEecCCC
Q 018265 113 -----TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAK----CCPKAIVNLISNPV 166 (358)
Q Consensus 113 -----~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tNP~ 166 (358)
...|.||+.+|..... ..+. ...+..|......+++.+.. ......+++++...
T Consensus 81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~ 149 (249)
T PRK12827 81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVA 149 (249)
T ss_pred HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCch
Confidence 4689999999864321 1111 23456777777777777651 22234566655443
No 164
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.28 E-value=0.0036 Score=62.23 Aligned_cols=114 Identities=20% Similarity=0.167 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch--h--HHHHHhcCCCCCe-EEE-EeCCCcHHhhhC----
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G--VTADISHMDTNAV-VRG-FLGQQQLEDALT---- 113 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~--g--~~~dl~~~~~~~~-v~~-~~~t~d~~~al~---- 113 (358)
.+.+||.|+||+|++|++++..|+..|. +|++++++... . ...++........ +.. .....++..+++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGY--NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 3457999999999999999999998887 89999876511 0 1111111100111 111 111133455566
Q ss_pred CCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 114 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
++|+||++++.+.. + ..+.+..|......+.+.+++..-. .++++|
T Consensus 136 ~~D~Vi~~aa~~~~-~--~~~~~~vn~~~~~~ll~aa~~~gv~-r~V~iS 181 (390)
T PLN02657 136 PVDVVVSCLASRTG-G--VKDSWKIDYQATKNSLDAGREVGAK-HFVLLS 181 (390)
T ss_pred CCcEEEECCccCCC-C--CccchhhHHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 59999998764321 1 1233466777888888888876543 344444
No 165
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0057 Score=57.52 Aligned_cols=116 Identities=16% Similarity=0.156 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---LEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al------ 112 (358)
+...+.|+||+|.+|++++..|+..|. .|++.|.+. ......++.... ..+..+.. -+| .++++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~--~Vv~~~r~~~~l~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA--RVVLGDVDKPGLRQAVNHLRAEG--FDVHGVMCDVRHREEVTHLADEAFRL 80 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 345799999999999999999999987 899999876 222223343211 12222111 112 22222
Q ss_pred -CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHH----HHHHHHHHhhCCCeEEEEecC
Q 018265 113 -TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIV----KTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 164 (358)
...|+||+.+|..... ..+. ...+..|+... +.+.+.+.+....+.+++++.
T Consensus 81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS 143 (275)
T PRK05876 81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS 143 (275)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 3479999999864211 1222 22345555444 444444444443456666654
No 166
>PRK07985 oxidoreductase; Provisional
Probab=97.27 E-value=0.017 Score=54.84 Aligned_cols=158 Identities=16% Similarity=0.090 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--h-hHHHHH-hcCCCCCeEEEEe-CCCcH----------
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P-GVTADI-SHMDTNAVVRGFL-GQQQL---------- 108 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~-g~~~dl-~~~~~~~~v~~~~-~t~d~---------- 108 (358)
++..++.|+||+|.+|.+++..|+..|. ++++.+.+.. . ....++ .... ..+..+. .-+|.
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~--~Vi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA--DVAISYLPVEEEDAQDVKKIIEECG--RKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC--EEEEecCCcchhhHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHH
Confidence 4446899999999999999999999987 8888876431 1 111122 1111 1222111 11221
Q ss_pred HhhhCCCCEEEEcCCCCCC--C--CCCH---HhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 109 EDALTGMDIVIIPAGVPRK--P--GMTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 109 ~~al~~aDiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
.+.+...|++|+.+|.... + ..+. ...+..|+.....+++.+..+- ..+.||++|......
T Consensus 123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~----------- 191 (294)
T PRK07985 123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ----------- 191 (294)
T ss_pred HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc-----------
Confidence 1223467999999886321 1 1222 2345667665555555554432 346677766543211
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+.|..-.++.+......+-+.+|..++ +..|++.++
T Consensus 192 -~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrvn~i 227 (294)
T PRK07985 192 -PSPHLLDYAATKAAILNYSRGLAKQVA--EKGIRVNIV 227 (294)
T ss_pred -CCCCcchhHHHHHHHHHHHHHHHHHHh--HhCcEEEEE
Confidence 223333455554444456667777663 344544444
No 167
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.27 E-value=0.0022 Score=60.91 Aligned_cols=110 Identities=13% Similarity=0.116 Sum_probs=66.7
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhh----hCCCCEEEEcCCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDA----LTGMDIVIIPAGV 124 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~a----l~~aDiVIi~ag~ 124 (358)
|.|+||+|++|++++..|...+.. +++++|..........+.......++.. ...++.. +.++|+||++|+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT-DILVVDNLRDGHKFLNLADLVIADYIDK---EDFLDRLEKGAFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc-eEEEEecCCCchhhhhhhheeeeccCcc---hhHHHHHHhhccCCCCEEEECccc
Confidence 579999999999999999988842 6788886542111111111000011110 1122222 2489999999986
Q ss_pred CCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 018265 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 164 (358)
..............|+.....+++.+.+... .++++|.
T Consensus 77 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~v~~SS 114 (314)
T TIGR02197 77 SDTTETDGEYMMENNYQYSKRLLDWCAEKGI--PFIYASS 114 (314)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHHhCC--cEEEEcc
Confidence 4322233455678899999999999887653 3555443
No 168
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0056 Score=56.87 Aligned_cols=155 Identities=16% Similarity=0.126 Sum_probs=83.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEe----CCCcHHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL----GQQQLEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~----~t~d~~~al------ 112 (358)
+..++.|+||+|.+|.+++..|+..|. +|++.|++.. .....++. ..+..+. ...+.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA--RVAIVDIDADNGAAVAASLG-----ERARFIATDITDDAAIERAVATVVAR 77 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CeeEEEEecCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999887 9999998752 11112221 1111111 111222222
Q ss_pred -CCCCEEEEcCCCCCCC--CCCH---HhHHHHHHHHHHHHHHHHHhh--CCCeEEEEecCCCCccHHHHHHHHHHhCCCC
Q 018265 113 -TGMDIVIIPAGVPRKP--GMTR---DDLFNINAGIVKTLCEGIAKC--CPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~--g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p 184 (358)
...|++|+.+|..... ..+. ...+..|+.-...+.+.+..+ .+.+.+++++.-.... +.+
T Consensus 78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~ 145 (261)
T PRK08265 78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF------------AQT 145 (261)
T ss_pred hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc------------CCC
Confidence 3679999999864321 1222 223444655444444433322 3456667665432211 223
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
..-.++.+......+.+.++..++ +..|++.++-
T Consensus 146 ~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v~ 179 (261)
T PRK08265 146 GRWLYPASKAAIRQLTRSMAMDLA--PDGIRVNSVS 179 (261)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhc--ccCEEEEEEc
Confidence 333455544334456677776664 3456554443
No 169
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.27 E-value=0.005 Score=56.82 Aligned_cols=152 Identities=18% Similarity=0.160 Sum_probs=83.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHHhcCCCCCeEEE-EeCCCcHHhhh-------CCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRG-FLGQQQLEDAL-------TGMD 116 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~--g~~~dl~~~~~~~~v~~-~~~t~d~~~al-------~~aD 116 (358)
.+|.|+||+|.+|.+++..|+..|. +++++|.+... ....++.... ..+.. .....+.++++ ...|
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGA--RVVIADIKPARARLAALEIGPAA--IAVSLDVTRQDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHhCCce--EEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4799999999999999999999987 89999987621 1222221110 00110 11111222323 3689
Q ss_pred EEEEcCCCCCC-C--CCC---HHhHHHHHHHHHHHHHHHHHhh----CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCC
Q 018265 117 IVIIPAGVPRK-P--GMT---RDDLFNINAGIVKTLCEGIAKC----CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPK 186 (358)
Q Consensus 117 iVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~ 186 (358)
++|+++|.... + ..+ -...+..|+.-...+.+.+..+ .+.+.+++++...... +.+..
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~~~ 150 (257)
T PRK07067 83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR------------GEALV 150 (257)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC------------CCCCC
Confidence 99999886421 1 111 2233566666655555555432 2345666665533211 33444
Q ss_pred cEEEeeeccHHHHHHHHHHHhCCCCCCCce
Q 018265 187 RLLGVTMLDVVRANTFVAEVLGLDPREVDV 216 (358)
Q Consensus 187 kviG~t~lds~R~~~~lA~~l~v~~~~v~~ 216 (358)
-.++.+......+.+.++..+. +..+++
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~--~~gi~v 178 (257)
T PRK07067 151 SHYCATKAAVISYTQSAALALI--RHGINV 178 (257)
T ss_pred chhhhhHHHHHHHHHHHHHHhc--ccCeEE
Confidence 4566654444456666776653 344443
No 170
>PRK05865 hypothetical protein; Provisional
Probab=97.26 E-value=0.0023 Score=69.36 Aligned_cols=104 Identities=18% Similarity=0.157 Sum_probs=71.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
|||.|+||+|++|++++..|+..|. +++.+|.+.... +.. . ...+.. .....++.++++++|+||++|+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~--~Vv~l~R~~~~~----~~~-~-v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH--EVVGIARHRPDS----WPS-S-ADFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCchhh----ccc-C-ceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 6899999999999999999999887 899998753110 110 0 011111 111234567789999999998753
Q ss_pred CCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC
Q 018265 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 166 (358)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~ 166 (358)
.. ....|+.....+++.+++.+.. .++++|.+.
T Consensus 73 ~~-------~~~vNv~GT~nLLeAa~~~gvk-r~V~iSS~~ 105 (854)
T PRK05865 73 GR-------NDHINIDGTANVLKAMAETGTG-RIVFTSSGH 105 (854)
T ss_pred cc-------hHHHHHHHHHHHHHHHHHcCCC-eEEEECCcH
Confidence 21 3467888888999988876533 566666654
No 171
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.25 E-value=0.004 Score=57.29 Aligned_cols=154 Identities=14% Similarity=0.123 Sum_probs=81.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeC-CCc---HHhh-------hCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG-QQQ---LEDA-------LTGM 115 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l~~a 115 (358)
|+|.|+||+|.+|..++..|+..|. ++++++++.... .++.+.. ...+..+.. -+| .+++ +.+.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~--~~~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERL--QELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999999999999999999887 899999875211 1111100 011111111 112 2222 2479
Q ss_pred CEEEEcCCCCC--CC--CCCH---HhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCC
Q 018265 116 DIVIIPAGVPR--KP--GMTR---DDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 116 DiVIi~ag~~~--~~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p 184 (358)
|+||+.+|... .+ ..+. ...+..|+.. .+.+.+.+.+. ..+.++++|...... +++
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~------------~~~ 142 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSW------------PYA 142 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCcccCC------------CCC
Confidence 99999988632 11 1122 2334556555 44444444432 234666666533211 233
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
....++.+......+...++..++ +..|++.++.
T Consensus 143 ~~~~Y~~sK~~~~~~~~~l~~~~~--~~~i~v~~v~ 176 (248)
T PRK10538 143 GGNVYGATKAFVRQFSLNLRTDLH--GTAVRVTDIE 176 (248)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhc--CCCcEEEEEe
Confidence 334555543333345556666653 4456555443
No 172
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.25 E-value=0.011 Score=54.58 Aligned_cols=119 Identities=15% Similarity=0.116 Sum_probs=69.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeC-CCcHH---hh-----
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLG-QQQLE---DA----- 111 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~-t~d~~---~a----- 111 (358)
..+.++|.|+||+|.+|++++..|+..|. .|+++|.+.. .....++.... ..+..+.. -+|.+ ++
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~Dl~d~~~i~~~~~~~~ 84 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGA--RVVLSARKAEELEEAAAHLEALG--IDALWIAADVADEADIERLAEETL 84 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHH
Confidence 34557999999999999999999999887 8999988652 11222232211 12211111 12221 11
Q ss_pred --hCCCCEEEEcCCCCCCCC---C---CHHhHHHHHHHHHHHHHHHHHhh----CCCeEEEEecCC
Q 018265 112 --LTGMDIVIIPAGVPRKPG---M---TRDDLFNINAGIVKTLCEGIAKC----CPKAIVNLISNP 165 (358)
Q Consensus 112 --l~~aDiVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNP 165 (358)
+...|.||+++|...... . .-...+..|+.....+.+.+..+ .+.+.++++|..
T Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~ 150 (259)
T PRK08213 85 ERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASV 150 (259)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECCh
Confidence 246799999988632111 1 12234567777777777766544 234566666553
No 173
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.24 E-value=0.0072 Score=55.24 Aligned_cols=116 Identities=17% Similarity=0.198 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---LEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al------ 112 (358)
+.++|.|+||+|++|+.++..|+..+. +++++|.+. ......++.... ..+..+.. -.| .++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~ 77 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA--KVAVFDLNREAAEKVAADIRAKG--GNAQAFACDITDRDSVDTAVAAAEQA 77 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999887 899999875 222223333221 12222111 112 22222
Q ss_pred -CCCCEEEEcCCCCCCCC---CCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 018265 113 -TGMDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 164 (358)
...|+||+.+|...... .+. ...+..|+.....+.+.+... .+...+++++.
T Consensus 78 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss 139 (250)
T TIGR03206 78 LGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIAS 139 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECc
Confidence 35899999988532111 111 223556666665555554321 23345666554
No 174
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0078 Score=55.91 Aligned_cols=158 Identities=16% Similarity=0.129 Sum_probs=87.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCcHH---hh------
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQLE---DA------ 111 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d~~---~a------ 111 (358)
++.+++.|+||+|++|.+++..|+..|. +|+++|++. ......++.... ..+..+. .-++.+ ++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGA--DVLIAARTESQLDEVAEQIRAAG--RRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999887 999999875 222223333211 1222211 112321 12
Q ss_pred -hCCCCEEEEcCCCCCCC---CCC---HHhHHHHHHHHHHHHHHHH----HhhCCCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 112 -LTGMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGI----AKCCPKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 112 -l~~aDiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
+...|+||+.+|..... ..+ -...+..|......+.+.. .+..+.+.+++++.-....
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~----------- 152 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL----------- 152 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------
Confidence 23689999998853211 111 2233455655444444444 3334556677766533221
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.+....++.+......+...++..+. + .+.+..+.
T Consensus 153 -~~~~~~~Y~~sK~a~~~~~~~~~~e~~--~-~i~v~~i~ 188 (263)
T PRK07814 153 -AGRGFAAYGTAKAALAHYTRLAALDLC--P-RIRVNAIA 188 (263)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHHC--C-CceEEEEE
Confidence 233344566654344456666777664 2 35554444
No 175
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.24 E-value=0.0041 Score=57.39 Aligned_cols=71 Identities=10% Similarity=0.158 Sum_probs=46.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~--~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
|+.+||+|||+ |.+|.+++..+...+. ..+++.++.+. .....++.+.. .+.. +.|++++++++|+||++
T Consensus 2 m~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~---~~~~---~~~~~~~~~~~DiViia 73 (245)
T PRK07634 2 LKKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSN-VEKLDQLQARY---NVST---TTDWKQHVTSVDTIVLA 73 (245)
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCC-HHHHHHHHHHc---CcEE---eCChHHHHhcCCEEEEe
Confidence 35679999998 9999999998887652 33477777532 11122232211 1222 24667889999999998
Q ss_pred C
Q 018265 122 A 122 (358)
Q Consensus 122 a 122 (358)
.
T Consensus 74 v 74 (245)
T PRK07634 74 M 74 (245)
T ss_pred c
Confidence 4
No 176
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.24 E-value=0.013 Score=53.53 Aligned_cols=158 Identities=16% Similarity=0.166 Sum_probs=84.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeC-CCc---HH-------hhhC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG-QQQ---LE-------DALT 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-t~d---~~-------~al~ 113 (358)
+..+|.|+||+|.+|.+++..|+..|. ++++++.+........+.... ..+..+.. -+| .+ +.+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA--DIVGAGRSEPSETQQQVEALG--RRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 456899999999999999999999987 899999765322222232211 11221111 112 21 1224
Q ss_pred CCCEEEEcCCCCCCCC---CC---HHhHHHHHHHHHHHHHHHHH----hhCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 114 GMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIA----KCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
..|++|+++|...... .+ -.+.+..|+.....+.+.+. +....+.+++++.-... .+.
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~~ 147 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF------------QGG 147 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc------------cCC
Confidence 6899999998643211 11 12335566555444554443 33224666665542111 112
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+..-.++.+......+.+.+++.+. +..|++.++-
T Consensus 148 ~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v~ 182 (248)
T TIGR01832 148 IRVPSYTASKHGVAGLTKLLANEWA--AKGINVNAIA 182 (248)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhC--ccCcEEEEEE
Confidence 2223455543333456677777763 4455544433
No 177
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.24 E-value=0.0085 Score=54.60 Aligned_cols=118 Identities=17% Similarity=0.218 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeC-CC---cHHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLG-QQ---QLEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~-t~---d~~~al------ 112 (358)
++.+|.|+|++|.+|.+++..|+..|. +|++++++.. .....++... ...+..+.. -+ ++++++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~--~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV--NVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999887 8999998751 1122233321 122322211 11 222333
Q ss_pred -CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCC
Q 018265 113 -TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPV 166 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~ 166 (358)
.+.|+||+++|..... +.+. ...+..|+.-...+.+.+..+ ...+.+++++...
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~ 145 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTA 145 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchh
Confidence 3799999998864321 1111 223455655444444444322 2234555555544
No 178
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0061 Score=55.57 Aligned_cols=156 Identities=15% Similarity=0.095 Sum_probs=84.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEeC----CCcHHhhhC-----
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFLG----QQQLEDALT----- 113 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~~----t~d~~~al~----- 113 (358)
..+|.|+||+|.+|++++..|+..|. +++++..+. ......++.... ..+..+.. ..+++++++
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADGF--AVAVNYAGSAAAADELVAEIEAAG--GRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999987 777776543 112222332211 12222211 112233333
Q ss_pred --CCCEEEEcCCCCCCC---C---CCHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCccHHHHHHHHHHhCCCC
Q 018265 114 --GMDIVIIPAGVPRKP---G---MTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 114 --~aDiVIi~ag~~~~~---g---~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p 184 (358)
+.|+||+.+|..... . +.-...+..|+.....+.+.+.+. .+.+.++++|.-... .+.|
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------------~~~~ 148 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA------------LPLP 148 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc------------CCCC
Confidence 689999999864211 0 112233556666555555554433 245667776543211 1234
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
....++.+......+...+++.++ +..+.+.++
T Consensus 149 ~~~~Y~~sK~a~~~~~~~~a~~~~--~~~i~v~~i 181 (245)
T PRK12937 149 GYGPYAASKAAVEGLVHVLANELR--GRGITVNAV 181 (245)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence 444566654443445566666653 334444333
No 179
>PRK06924 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0032 Score=57.80 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=30.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
++|.|+||+|.+|+.++..|+..|. +|++++++.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~--~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT--HVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC--EEEEEeCCc
Confidence 4799999999999999999999887 899998765
No 180
>PRK07680 late competence protein ComER; Validated
Probab=97.21 E-value=0.002 Score=60.80 Aligned_cols=97 Identities=14% Similarity=0.211 Sum_probs=62.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~--~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~ 124 (358)
|||+|||+ |.+|..++..|...+. ..++.++|++... ...+.+. .+.+.. +.+..++++++|+||++.-
T Consensus 1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~--~~~~~~~--~~g~~~---~~~~~~~~~~aDiVilav~- 71 (273)
T PRK07680 1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAK--AYHIKER--YPGIHV---AKTIEEVISQSDLIFICVK- 71 (273)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHH--HHHHHHH--cCCeEE---ECCHHHHHHhCCEEEEecC-
Confidence 58999998 9999999999988773 2478999986521 1222221 112232 2355677899999999851
Q ss_pred CCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCC
Q 018265 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVN 167 (358)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d 167 (358)
-..+.++++.+..+- ++.+|+.++|++.
T Consensus 72 ---------------p~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 72 ---------------PLDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred ---------------HHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 122344445554433 5677888888774
No 181
>PRK07069 short chain dehydrogenase; Validated
Probab=97.21 E-value=0.016 Score=52.92 Aligned_cols=146 Identities=18% Similarity=0.171 Sum_probs=81.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCC-C--chhHHHHHhcCCCCCeEEE----EeCCCcHHh-------hhC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTNAVVRG----FLGQQQLED-------ALT 113 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~-~--~~g~~~dl~~~~~~~~v~~----~~~t~d~~~-------al~ 113 (358)
||.|+||+|.+|.+++..|+..|. ++++.+.+ . ......++........+.. .....++++ .+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA--KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999998887 89999986 3 2222223322211111111 111111212 234
Q ss_pred CCCEEEEcCCCCCCC---CCC---HHhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 114 GMDIVIIPAGVPRKP---GMT---RDDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
..|+||+.+|..... ..+ -...+..|+. ..+.+.+.+++.. .+.+++++...... +.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~------------~~ 145 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFK------------AE 145 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhcc------------CC
Confidence 689999999864321 111 2234556665 6777777777654 34566655433221 12
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhC
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
+..-.++.+......+.+.+++.+.
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~e~~ 170 (251)
T PRK07069 146 PDYTAYNASKAAVASLTKSIALDCA 170 (251)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhc
Confidence 2223455544334456667777664
No 182
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.21 E-value=0.004 Score=58.96 Aligned_cols=167 Identities=17% Similarity=0.151 Sum_probs=102.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhH---HHHHhcCCCCCeEEEEeC-CCcHHhhhC--CCCEEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---TADISHMDTNAVVRGFLG-QQQLEDALT--GMDIVII 120 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~---~~dl~~~~~~~~v~~~~~-t~d~~~al~--~aDiVIi 120 (358)
|++.|+|++||||+++...++.+..-.+|+.+|.-.-.|. ..++.+.+....+++-.+ .....+.++ +.|.|++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 5899999999999999998888765457888886552232 334444332223333111 123344555 6899999
Q ss_pred cCCCCC--CCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEe-cCCCCccHHHHHHHHHHhCCCCCCcEEEeeeccHH
Q 018265 121 PAGVPR--KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI-SNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVV 197 (358)
Q Consensus 121 ~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~lds~ 197 (358)
.|.-.- +.=..-..++..|+-....+.++++++...-.++-+ |.-|.---..--..+-..+.+.|+..+.-+.-.+.
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 875211 000123568899999999999999999754334433 44332110000000123456777888877665566
Q ss_pred HHHHHHHHHhCCCCCC
Q 018265 198 RANTFVAEVLGLDPRE 213 (358)
Q Consensus 198 R~~~~lA~~l~v~~~~ 213 (358)
.|-+.+.+-+|++..-
T Consensus 161 ~lVray~~TYglp~~I 176 (340)
T COG1088 161 LLVRAYVRTYGLPATI 176 (340)
T ss_pred HHHHHHHHHcCCceEE
Confidence 6788888888986533
No 183
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.20 E-value=0.0038 Score=56.86 Aligned_cols=156 Identities=19% Similarity=0.251 Sum_probs=81.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe--CCCcHHhh-------hC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL--GQQQLEDA-------LT 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~--~t~d~~~a-------l~ 113 (358)
+..++.|+||+|.+|+.++..|+..+. .+++.+.+. ......++. ......... ...+++++ +.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA--IVGLHGTRVEKLEALAAELG---ERVKIFPANLSDRDEVKALGQKAEADLE 79 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC---CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 456999999999999999999999886 778887654 111112221 111111110 01112221 34
Q ss_pred CCCEEEEcCCCCCCC---C---CCHHhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHhCCCC
Q 018265 114 GMDIVIIPAGVPRKP---G---MTRDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~---g---~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p 184 (358)
..|+||+++|..... . .+-...+..|+.....+++.+.+. .+.+.+++++...... +.|
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~ 147 (245)
T PRK12936 80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT------------GNP 147 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc------------CCC
Confidence 689999999864321 1 112234556666555555544322 2345677766543221 223
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
....++.+......+.+.+++.+. +..+++..+
T Consensus 148 ~~~~Y~~sk~a~~~~~~~la~~~~--~~~i~v~~i 180 (245)
T PRK12936 148 GQANYCASKAGMIGFSKSLAQEIA--TRNVTVNCV 180 (245)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhh--HhCeEEEEE
Confidence 333455544333445566666653 234444443
No 184
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0059 Score=56.27 Aligned_cols=142 Identities=11% Similarity=0.072 Sum_probs=80.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEe----CCCcHHhhhC-------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFL----GQQQLEDALT------- 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~----~t~d~~~al~------- 113 (358)
+.+++.|+||+|.+|++++..|+..|. +|+++|++... .... ..+..+. ...+.+++++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~--~v~~~~r~~~~----~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA--TVVVCGRRAPE----TVDG----RPAEFHAADVRDPDQVAALVDAIVERHG 74 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCChhh----hhcC----CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999887 89999986421 0110 1111110 1112333333
Q ss_pred CCCEEEEcCCCCCC-C--CCC---HHhHHHHHHHHHHHHHHHHHh----hCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 114 GMDIVIIPAGVPRK-P--GMT---RDDLFNINAGIVKTLCEGIAK----CCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 114 ~aDiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
..|+||+.+|.... + ..+ ....+..|+.....+.+.+.. ....+.+|+++.-.... +.
T Consensus 75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~ 142 (252)
T PRK07856 75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR------------PS 142 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC------------CC
Confidence 45999999986321 1 111 223455666655555555433 22335677766533221 23
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhC
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
|..-.++.+......+.+.++..++
T Consensus 143 ~~~~~Y~~sK~a~~~l~~~la~e~~ 167 (252)
T PRK07856 143 PGTAAYGAAKAGLLNLTRSLAVEWA 167 (252)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhc
Confidence 3334455554444556677777775
No 185
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.19 E-value=0.0011 Score=54.86 Aligned_cols=72 Identities=19% Similarity=0.273 Sum_probs=46.3
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcC--CCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~--~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
||+|+||+|.+|..++..|...+.+..+.+++.....|....-... .....+.... .+ .+.+.++|+||.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD-PEELSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS-GHHHTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc-hhHhhcCCEEEecC
Confidence 7999999999999999999997766566777765523332211111 1122333321 34 36689999999985
No 186
>PRK09135 pteridine reductase; Provisional
Probab=97.19 E-value=0.0084 Score=54.62 Aligned_cols=147 Identities=14% Similarity=0.113 Sum_probs=81.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhhC------
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFLG-QQQ---LEDALT------ 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------ 113 (358)
.+|.|+||+|++|++++..|+..|. ++++++... ......++.+... ..+..+.. -+| ...+++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGY--RVAIHYHRSAAEADALAAELNALRP-GSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhcC-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999999887 899998753 2222233332211 11111111 122 222333
Q ss_pred -CCCEEEEcCCCCCC--CC-C---CHHhHHHHHHHHHHHHHHHHHhhC--CCeEEEEecCCCCccHHHHHHHHHHhCCCC
Q 018265 114 -GMDIVIIPAGVPRK--PG-M---TRDDLFNINAGIVKTLCEGIAKCC--PKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 114 -~aDiVIi~ag~~~~--~g-~---~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNP~d~~t~~~~~~~~~~~~~p 184 (358)
+.|+||+++|.... .. . .-.+.+..|+.....+.+.+..+- ..+.++..+. . .....++
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~ 151 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD----I--------HAERPLK 151 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC----h--------hhcCCCC
Confidence 57999999985321 11 1 123455677766666666654332 1234443322 1 0112344
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhC
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
+...++.+......+-..+++.++
T Consensus 152 ~~~~Y~~sK~~~~~~~~~l~~~~~ 175 (249)
T PRK09135 152 GYPVYCAAKAALEMLTRSLALELA 175 (249)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHC
Confidence 555667766555566667777664
No 187
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.18 E-value=0.003 Score=59.11 Aligned_cols=66 Identities=17% Similarity=0.279 Sum_probs=46.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCC--CcEEEEE-eCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLY-DVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~--~~el~L~-D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||++||. |.+|+.++..|+..++ ..+|+.+ |++... ...+... .+.. ..+..+++++||+||++.
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~--~~~~~~~----g~~~---~~~~~e~~~~aDvVil~v 69 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPAR--RDVFQSL----GVKT---AASNTEVVKSSDVIILAV 69 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH--HHHHHHc----CCEE---eCChHHHHhcCCEEEEEE
Confidence 79999998 9999999999998774 4578888 665422 2223221 1222 234567789999999985
No 188
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.14 E-value=0.004 Score=59.08 Aligned_cols=110 Identities=19% Similarity=0.112 Sum_probs=67.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-hhH-HHHHhcCCCCCeEEEEeC----CCcHHhhhC--CCCEEE
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGV-TADISHMDTNAVVRGFLG----QQQLEDALT--GMDIVI 119 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~-~~dl~~~~~~~~v~~~~~----t~d~~~al~--~aDiVI 119 (358)
||.|+||+|++|+.++..|...+. +++++|.... ... ...+... ..+..+.. ..+++++++ +.|+||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~--~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH--EVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC--eEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 689999999999999999998887 7888875431 111 1111111 01222111 123344454 689999
Q ss_pred EcCCCCCCC--CCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 120 IPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 120 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
+++|..... .....+.+..|+.....+++.+.++... .+++++
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~s 120 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVK-KFIFSS 120 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCC-EEEEec
Confidence 999864321 1223445678899999999988876543 344433
No 189
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.14 E-value=0.014 Score=53.47 Aligned_cols=120 Identities=18% Similarity=0.205 Sum_probs=67.7
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCC-CCeEEEEeCC-Cc----------H
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-NAVVRGFLGQ-QQ----------L 108 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~-~~~v~~~~~t-~d----------~ 108 (358)
..+.++|.|+|++|++|.+++..|+..|. +|+++|++. ......++.+... ...+.....+ .+ +
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA--TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 34567999999999999999999998887 999999876 2233344443221 1111111110 01 1
Q ss_pred HhhhCCCCEEEEcCCCCCC--C--CCCH---HhHHHHHHHHHHHHHHHHHh---hCCCeEEEEecC
Q 018265 109 EDALTGMDIVIIPAGVPRK--P--GMTR---DDLFNINAGIVKTLCEGIAK---CCPKAIVNLISN 164 (358)
Q Consensus 109 ~~al~~aDiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~---~~p~a~viv~tN 164 (358)
.+.+...|+||+.+|.... + ..+. ...+..|+.....+.+.+.. ..+...+++++.
T Consensus 87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss 152 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS 152 (247)
T ss_pred HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 2333468999999886321 1 2222 23355666554444444432 224455666554
No 190
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.017 Score=54.97 Aligned_cols=157 Identities=13% Similarity=0.136 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC----CCcHHhhh-----
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG----QQQLEDAL----- 112 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~----t~d~~~al----- 112 (358)
++.++|.|+||+|.+|.+++..|+..|. +|+++|++. ......++.... ..+..+.. ..+.++++
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~--~Vi~~~R~~~~l~~~~~~l~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~ 113 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGA--TVVAVARREDLLDAVADRITRAG--GDAMAVPCDLSDLDAVDALVADVEK 113 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4456899999999999999999999887 999999875 222222232211 11111111 11222333
Q ss_pred --CCCCEEEEcCCCCCCC--CC---CH---HhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHH
Q 018265 113 --TGMDIVIIPAGVPRKP--GM---TR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFK 178 (358)
Q Consensus 113 --~~aDiVIi~ag~~~~~--g~---~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~ 178 (358)
...|+||+++|..... .+ +. ...+..|.- +.+.+.+.+.+.. .+.+++++.-. .. .
T Consensus 114 ~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~-~~--------~ 183 (293)
T PRK05866 114 RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWG-VL--------S 183 (293)
T ss_pred HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChh-hc--------C
Confidence 3789999999864211 11 11 123444543 3445555555443 35566655411 10 0
Q ss_pred HhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEE
Q 018265 179 KVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPV 218 (358)
Q Consensus 179 ~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v 218 (358)
...|..-.++.+......+...++..+. ...|++.+
T Consensus 184 --~~~p~~~~Y~asKaal~~l~~~la~e~~--~~gI~v~~ 219 (293)
T PRK05866 184 --EASPLFSVYNASKAALSAVSRVIETEWG--DRGVHSTT 219 (293)
T ss_pred --CCCCCcchHHHHHHHHHHHHHHHHHHhc--ccCcEEEE
Confidence 0123233455544444455666666653 33454433
No 191
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0038 Score=57.21 Aligned_cols=116 Identities=17% Similarity=0.225 Sum_probs=66.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-----
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTNAVVRGFL-GQQQ---LEDAL----- 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al----- 112 (358)
+.++|.|+||+|++|.+++..|+..|. ++++++++.. .....++.... ..+..+. .-+| .+.++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA--HVVVNYRQKAPRANKVVAEIEAAG--GRASAVGADLTDEESVAALMDTARE 80 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCchHhHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 345899999999999999999998887 8888877541 11222333211 1122111 1122 22222
Q ss_pred --CCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC
Q 018265 113 --TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISN 164 (358)
Q Consensus 113 --~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 164 (358)
.+.|+||+.+|............+..|......+++.+.++. ..+.++++|.
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 81 EFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred hCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 368999998875322111122334456666666666666553 2456666654
No 192
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0068 Score=56.49 Aligned_cols=147 Identities=16% Similarity=0.125 Sum_probs=79.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe----CCCcHHhhh-------
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL----GQQQLEDAL------- 112 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~----~t~d~~~al------- 112 (358)
..+|.|+||+|.+|+.++..|+..|. .|+++|++. ......++.... ..+..+. ...+.+.++
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGA--NVAVASRSQEKVDAAVAQLQQAG--PEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999998887 899999865 222222333211 1111111 111222222
Q ss_pred CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHHHHhh--CCCeEEEEecCCCCccHHHHHHHHHHhCCCC
Q 018265 113 TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKC--CPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p 184 (358)
...|+||+.+|..... ..+. ...+..|......+.+....+ .+++.+++++...... +.|
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~------------~~~ 152 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV------------PMP 152 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc------------CCC
Confidence 3569999988753211 1122 223445655555555444332 1346777776654221 122
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhC
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
..-.++.+.....++-..++..+.
T Consensus 153 ~~~~Y~asK~a~~~l~~~la~e~~ 176 (264)
T PRK07576 153 MQAHVCAAKAGVDMLTRTLALEWG 176 (264)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhh
Confidence 233344444334456666666654
No 193
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.13 E-value=0.0034 Score=58.84 Aligned_cols=96 Identities=14% Similarity=0.175 Sum_probs=60.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~-~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~ 124 (358)
+|||+|||+ |.+|..++..+...+. ..++.++|++... ...+.+.. .+.. +.+..+.+.+||+||++.-
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~--~~~~~~~~---g~~~---~~~~~~~~~~advVil~v~- 71 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEK--RAALAEEY---GVRA---ATDNQEAAQEADVVVLAVK- 71 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHH--HHHHHHhc---CCee---cCChHHHHhcCCEEEEEcC-
Confidence 479999998 9999999999988763 2378999986521 12222210 1121 2355677899999999841
Q ss_pred CCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 018265 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (358)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 167 (358)
...+.++++.+..+. +..|+..+|-+.
T Consensus 72 ---------------~~~~~~v~~~l~~~~-~~~vvs~~~gi~ 98 (267)
T PRK11880 72 ---------------PQVMEEVLSELKGQL-DKLVVSIAAGVT 98 (267)
T ss_pred ---------------HHHHHHHHHHHHhhc-CCEEEEecCCCC
Confidence 123445555554443 456666677653
No 194
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.026 Score=52.07 Aligned_cols=159 Identities=18% Similarity=0.160 Sum_probs=85.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CC---cHHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQ---QLEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~---d~~~al------ 112 (358)
+.++|.|+||+|.+|.+++..|+..|. +|+++|++. ......++........+..+.. -+ +..+++
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA--AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999887 899999876 2223333432111112222111 11 222333
Q ss_pred -CCCCEEEEcCCCCCCC--C-CCH---HhHHHHHHHHH----HHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 113 -TGMDIVIIPAGVPRKP--G-MTR---DDLFNINAGIV----KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~--g-~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
...|++|+.+|..... . .+. ...+..|+... +...+.+.+. ..+.|++++......
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------ 150 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIASTHAFK------------ 150 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECChhhcc------------
Confidence 3689999999864211 1 111 22344455444 4444444433 346677665432111
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.+..-.++.+...-..+.+.+++.+. +..|++..+-
T Consensus 151 ~~~~~~~Y~~sKaa~~~~~~~la~el~--~~gIrvn~v~ 187 (260)
T PRK07063 151 IIPGCFPYPVAKHGLLGLTRALGIEYA--ARNVRVNAIA 187 (260)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEEe
Confidence 122223344444333456677777763 4456554443
No 195
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.12 E-value=0.0097 Score=59.52 Aligned_cols=131 Identities=19% Similarity=0.206 Sum_probs=71.0
Q ss_pred hcCCCccccccccccccccccCCCCCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCC
Q 018265 18 HLHPPTLQIEGESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNA 97 (358)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~ 97 (358)
|++|.+-...|--.++.+..-++. ..+.++|.|+||+|.+|++++..|+..|. +++++|.+... ....+.......
T Consensus 151 ~~~~~~~~~~~~~~~~d~~~~ta~-sl~gK~VLITGASgGIG~aLA~~La~~G~--~Vi~l~r~~~~-l~~~~~~~~~~v 226 (406)
T PRK07424 151 HFDNQNAYYCGTFTLVDKLMGTAL-SLKGKTVAVTGASGTLGQALLKELHQQGA--KVVALTSNSDK-ITLEINGEDLPV 226 (406)
T ss_pred EeccccceeeeeEEEeehhcCccc-CCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHHHhhcCCCe
Confidence 344543344433334444332322 23456899999999999999999999887 88999876521 111121111111
Q ss_pred e-EEE-EeCCCcHHhhhCCCCEEEEcCCCCCCCCCCH---HhHHHHHHHH----HHHHHHHHHh
Q 018265 98 V-VRG-FLGQQQLEDALTGMDIVIIPAGVPRKPGMTR---DDLFNINAGI----VKTLCEGIAK 152 (358)
Q Consensus 98 ~-v~~-~~~t~d~~~al~~aDiVIi~ag~~~~~g~~r---~~~~~~N~~i----~~~i~~~i~~ 152 (358)
. +.. .....+..+.+.+.|++|+.+|.......+. .+.+..|... ++.+.+.+++
T Consensus 227 ~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~ 290 (406)
T PRK07424 227 KTLHWQVGQEAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKT 290 (406)
T ss_pred EEEEeeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 111 1111234455788999999988653322222 2344556554 4444444544
No 196
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.013 Score=53.45 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeC-CCcH---Hhhh-----
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLG-QQQL---EDAL----- 112 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~-t~d~---~~al----- 112 (358)
++.++|.|+||+|.+|+.++..|+..|. ++++++.+.. .....++.... ..+..+.. -+|. ++++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA--TVAFNDGLAAEARELAAALEAAG--GRAHAIAADLADPASVQRFFDAAAA 80 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999887 8899987652 22223343221 12222111 1221 1222
Q ss_pred --CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 018265 113 --TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (358)
Q Consensus 113 --~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 164 (358)
.+.|+||+++|..... ..+. ...+..|..-...+.+.+..+ ...+.+++++.
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (250)
T PRK12939 81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS 143 (250)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence 4789999998864321 1121 222445665555555554432 22456776655
No 197
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.12 E-value=0.0097 Score=55.01 Aligned_cols=157 Identities=17% Similarity=0.204 Sum_probs=86.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEe----CCCcHHhhh-------C
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFL----GQQQLEDAL-------T 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~----~t~d~~~al-------~ 113 (358)
+..++.|+||+|.+|..++..|+..|. +|++++.+........+.... .++..+. ...+.++++ .
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA--DIVGVGVAEAPETQAQVEALG--RKFHFITADLIQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 345899999999999999999999988 889988754222222222211 1222111 111222222 3
Q ss_pred CCCEEEEcCCCCCCC---CCCH---HhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 114 GMDIVIIPAGVPRKP---GMTR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
..|++|+.+|..... ..+. ...+..|+. +.+.+.+.+.+....+.||+++...... +.
T Consensus 83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~ 150 (251)
T PRK12481 83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ------------GG 150 (251)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC------------CC
Confidence 579999999864321 1111 223445544 3455555554443346777765543221 12
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+..-.|+.+......+-+.+|..+. +..|++..+
T Consensus 151 ~~~~~Y~asK~a~~~l~~~la~e~~--~~girvn~v 184 (251)
T PRK12481 151 IRVPSYTASKSAVMGLTRALATELS--QYNINVNAI 184 (251)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence 2223466655445566777777663 345554444
No 198
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0058 Score=55.23 Aligned_cols=116 Identities=16% Similarity=0.186 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHHhcCCCCCeEEEE--eCCCcHHhhh-------C
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRGF--LGQQQLEDAL-------T 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~--g~~~dl~~~~~~~~v~~~--~~t~d~~~al-------~ 113 (358)
+.++|.|+||+|.+|+.++..|++.|. +++++|++... ....++.... ..+... ....++++++ .
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA--RVALIGRGAAPLSQTLPGVPADA--LRIGGIDLVDPQAARRAVDEVNRQFG 81 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC--eEEEEeCChHhHHHHHHHHhhcC--ceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 345899999999999999999999887 89999987621 1222332211 111111 1111222223 3
Q ss_pred CCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 018265 114 GMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 164 (358)
..|+||+.+|..... ..+. .+.+..|......+++.+.++ .+...+++++.
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (239)
T PRK12828 82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA 141 (239)
T ss_pred CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 689999998753211 1111 223445555555555544321 23445666554
No 199
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.029 Score=52.37 Aligned_cols=155 Identities=17% Similarity=0.153 Sum_probs=81.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCC-eEEEEeCCCcH----------HhhhC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNA-VVRGFLGQQQL----------EDALT 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~-~v~~~~~t~d~----------~~al~ 113 (358)
+++.|+||+|.+|..++..|+..|. .+++++++. ......++....... ..... .-+|. .+.+.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA--ELFLTDRDADGLAQTVADARALGGTVPEHRAL-DISDYDAVAAFAADIHAAHG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEe-eCCCHHHHHHHHHHHHHhcC
Confidence 3799999999999999999998886 899999865 222223333221111 10111 01121 12234
Q ss_pred CCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHH----HHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 114 GMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEG----IAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
..|+||+.+|..... ..+. ...+..|+.....+++. +.+....+.+++++...... +.
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~------------~~ 145 (272)
T PRK07832 78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV------------AL 145 (272)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC------------CC
Confidence 689999999864321 1121 23345565544444444 33323346677766544221 22
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEE
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPV 218 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v 218 (358)
|..-.++.+......+...++..+. ..+|++.+
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~l~~e~~--~~~i~v~~ 178 (272)
T PRK07832 146 PWHAAYSASKFGLRGLSEVLRFDLA--RHGIGVSV 178 (272)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhh--hcCcEEEE
Confidence 3233455544333345566665543 34454443
No 200
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.10 E-value=0.0057 Score=55.23 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVV 81 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~ 81 (358)
+..||+|+|+ |.+|+.++..|+..|+ .+++|+|.+
T Consensus 20 ~~~~V~IvG~-GglGs~ia~~La~~Gv-g~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGL-GGLGSNVAINLARAGI-GKLILVDFD 54 (200)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 3458999998 9999999999999886 489999998
No 201
>PRK06128 oxidoreductase; Provisional
Probab=97.10 E-value=0.015 Score=55.34 Aligned_cols=156 Identities=19% Similarity=0.176 Sum_probs=85.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc----hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-----
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTNAVVRGFL-GQQQ---LEDA----- 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~----~g~~~dl~~~~~~~~v~~~~-~t~d---~~~a----- 111 (358)
+.++|.|+||+|.+|.+++..|+..|. ++++.+.+.. ......+.... ..+..+. .-+| .+++
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA--DIALNYLPEEEQDAAEVVQLIQAEG--RKAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHHHcC--CeEEEEecCCCCHHHHHHHHHHHH
Confidence 346899999999999999999999887 7888765431 11222232221 1111111 1112 2222
Q ss_pred --hCCCCEEEEcCCCCC--CC--CCC---HHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 112 --LTGMDIVIIPAGVPR--KP--GMT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 112 --l~~aDiVIi~ag~~~--~~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
+...|++|+.+|... .+ ..+ -...+..|+.....+++.+..+- +.+.||+++.-....
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~------------ 197 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ------------ 197 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC------------
Confidence 346899999998642 11 112 23456777776777777766543 345666665433211
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPV 218 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v 218 (358)
+.+..-.++.+......+.+.+++.+. +..|++.+
T Consensus 198 ~~~~~~~Y~asK~a~~~~~~~la~el~--~~gI~v~~ 232 (300)
T PRK06128 198 PSPTLLDYASTKAAIVAFTKALAKQVA--EKGIRVNA 232 (300)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhh--hcCcEEEE
Confidence 122222344544444456677777663 34454433
No 202
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.015 Score=53.38 Aligned_cols=118 Identities=15% Similarity=0.112 Sum_probs=67.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-----
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQ---LEDA----- 111 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~a----- 111 (358)
+++.++|.|+||+|.+|++++..|+.+|. +|+++|++. ......++.... ..+..+. .-+| ++.+
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 77 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGA--DVVLAARTAERLDEVAAEIDDLG--RRALAVPTDITDEDQCANLVALAL 77 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHH
Confidence 34557999999999999999999999987 899999875 222223332211 1111111 1122 2222
Q ss_pred --hCCCCEEEEcCCCCCC--C--CCCH---HhHHHHHHHHHHHHHHHHHhhC--CCeEEEEecC
Q 018265 112 --LTGMDIVIIPAGVPRK--P--GMTR---DDLFNINAGIVKTLCEGIAKCC--PKAIVNLISN 164 (358)
Q Consensus 112 --l~~aDiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 164 (358)
+...|+||+.+|.... + ..+. ...+..|+.-...+.+.+..+- ....+|+++.
T Consensus 78 ~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS 141 (258)
T PRK07890 78 ERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS 141 (258)
T ss_pred HHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 2468999999986321 1 1222 2334556655555555554321 1246666654
No 203
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.09 E-value=0.00068 Score=56.74 Aligned_cols=102 Identities=20% Similarity=0.240 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~ 124 (358)
..+||+|||+ |.||.+++..|...++ +|.-+-... ......+.... +.... .++++.+++||++|++..
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~ag~--~v~~v~srs-~~sa~~a~~~~--~~~~~----~~~~~~~~~aDlv~iavp- 77 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARAGH--EVVGVYSRS-PASAERAAAFI--GAGAI----LDLEEILRDADLVFIAVP- 77 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHTTS--EEEEESSCH-H-HHHHHHC----TT---------TTGGGCC-SEEEE-S--
T ss_pred CccEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCC-ccccccccccc--ccccc----cccccccccCCEEEEEec-
Confidence 4689999998 9999999999999987 666664332 22222233221 11111 235678999999999852
Q ss_pred CCCCCCCHHhHHHHHHHHHHHHHHHHHhh--C-CCeEEEEe--cCCCCccHHH
Q 018265 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKC--C-PKAIVNLI--SNPVNSTVPI 172 (358)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~-p~a~viv~--tNP~d~~t~~ 172 (358)
+ ..+.+++++|..+ . |+.+|+=. +-+++++.++
T Consensus 78 ----D-----------daI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~ 115 (127)
T PF10727_consen 78 ----D-----------DAIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPA 115 (127)
T ss_dssp ----C-----------CHHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHH
T ss_pred ----h-----------HHHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhH
Confidence 1 2466778888776 2 45444433 3667777653
No 204
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0061 Score=56.04 Aligned_cols=114 Identities=21% Similarity=0.296 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFL-GQQQ---LEDAL------- 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 112 (358)
+..+|.|+||+|.+|++++..|++.|. ++++++++.. .....++... .+..+. .-+| .++++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA--RVALLDRSEDVAEVAAQLLGG----NAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhhCC----ceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 445899999999999999999999887 8999998652 1122222211 111110 1112 22222
Q ss_pred CCCCEEEEcCCCCCCCC---CCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 018265 113 TGMDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 164 (358)
...|+||+++|...... .+. ...+..|+.-...+.+.+..+ ...+.++++|.
T Consensus 88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 148 (255)
T PRK06841 88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS 148 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 36799999998643111 111 224556666555555555433 22456666554
No 205
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.023 Score=52.18 Aligned_cols=157 Identities=17% Similarity=0.166 Sum_probs=82.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEe-CCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC----
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN--TPGVTADISHMDTNAVVRGFL-GQQQ---LEDALT---- 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D-~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al~---- 113 (358)
+.++|.|+||+|.+|++++..|+..|. ++++.. .+. ......++.... ..+..+. .-+| ..++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETIREIESNG--GKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 346999999999999999999998886 776653 332 111222232111 1111111 1122 222222
Q ss_pred ---------CCCEEEEcCCCCCCCC---CCH---HhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHH
Q 018265 114 ---------GMDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVF 177 (358)
Q Consensus 114 ---------~aDiVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~ 177 (358)
+.|+||+++|...... .+. ...+..|+.....+.+.+.++. ..+.++++|.....
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~--------- 151 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR--------- 151 (254)
T ss_pred HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc---------
Confidence 5899999998643211 111 2334567776666666665543 23455555443211
Q ss_pred HHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 178 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 178 ~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
.+.+..-.++.+......+...+++.++ +..+++..+
T Consensus 152 ---~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~~v 188 (254)
T PRK12746 152 ---LGFTGSIAYGLSKGALNTMTLPLAKHLG--ERGITVNTI 188 (254)
T ss_pred ---CCCCCCcchHhhHHHHHHHHHHHHHHHh--hcCcEEEEE
Confidence 1233333456655444455666776654 334544333
No 206
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0079 Score=56.46 Aligned_cols=112 Identities=10% Similarity=0.065 Sum_probs=64.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC--------CCCE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALT--------GMDI 117 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~--------~aDi 117 (358)
++|.|+||+|.+|.+++..|+..|. +|++.+++... ..++..... ..+.. .+...+.+.+++ ..|+
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~--~Vi~~~r~~~~--~~~l~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGW--RVFATCRKEED--VAALEAEGL-EAFQLDYAEPESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHCCc-eEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence 3799999999999999999999887 89999986521 112222110 01110 000111222222 4699
Q ss_pred EEEcCCCCCCC---CCC---HHhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 018265 118 VIIPAGVPRKP---GMT---RDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 118 VIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 164 (358)
||+.+|..... ..+ -...+..|+.. .+.+.+.+++.. .+.|+++|.
T Consensus 80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS 135 (277)
T PRK05993 80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSS 135 (277)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECC
Confidence 99998864321 111 12345566554 566666666543 345666654
No 207
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.015 Score=55.20 Aligned_cols=120 Identities=15% Similarity=0.134 Sum_probs=71.5
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHHhcCCCCCeEEEEeC-CC---cHHhhh--
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTNAVVRGFLG-QQ---QLEDAL-- 112 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---~g~~~dl~~~~~~~~v~~~~~-t~---d~~~al-- 112 (358)
...+.++|.|+||+|.+|++++..|+..|. ++++++.+.. ......+... ...+..+.. -+ ++++++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~--~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~ 117 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA--DIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEE 117 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHH
Confidence 344557899999999999999999999887 8999988651 1222223211 112222111 11 222222
Q ss_pred -----CCCCEEEEcCCCCCC--C--CCC---HHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCC
Q 018265 113 -----TGMDIVIIPAGVPRK--P--GMT---RDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNP 165 (358)
Q Consensus 113 -----~~aDiVIi~ag~~~~--~--g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP 165 (358)
...|+||+.+|.... + ..+ -...+..|+.....+.+.+..+ .+.+.+|++|.-
T Consensus 118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~ 183 (290)
T PRK06701 118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSI 183 (290)
T ss_pred HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 357999999886321 1 111 1334677777777777777654 345566666553
No 208
>PRK06545 prephenate dehydrogenase; Validated
Probab=97.06 E-value=0.0035 Score=61.67 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=46.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
.||+|||. |.+|.+++..|...++ ++.++|.+........-..... ... .++++++++++||+||++.
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~--~v~i~~~~~~~~~~~~a~~~~~---~~~--~~~~~~~~~~~aDlVilav 68 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGP--DVFIIGYDPSAAQLARALGFGV---IDE--LAADLQRAAAEADLIVLAV 68 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCC--CeEEEEeCCCHHHHHHHhcCCC---Ccc--cccCHHHHhcCCCEEEEeC
Confidence 37999998 9999999999999887 7788887762211111111110 111 1346778899999999985
No 209
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.06 E-value=0.0065 Score=55.98 Aligned_cols=117 Identities=14% Similarity=0.174 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe----CCCcHHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL----GQQQLEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~----~t~d~~~al------ 112 (358)
+.++|.|+||+|.+|+.++..|+..|. .|+++|++. ......++.... ..+..+. ...++..++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA--HVLVNGRNAATLEAAVAALRAAG--GAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 456899999999999999999998887 899999875 222233343221 1121111 111222223
Q ss_pred -CCCCEEEEcCCCCCC-C--CCCH---HhHHHHHHHHHHHHH----HHHHhhCCCeEEEEecCCC
Q 018265 113 -TGMDIVIIPAGVPRK-P--GMTR---DDLFNINAGIVKTLC----EGIAKCCPKAIVNLISNPV 166 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tNP~ 166 (358)
...|+||+.+|.... + ..+. ...+..|+.-...+. +.+.+. ..+.+++++...
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~ss~~ 149 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-GYGRIIAITSIA 149 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEeech
Confidence 245899999886421 1 1111 223556655445555 444333 345677766544
No 210
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.06 E-value=0.03 Score=51.42 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=30.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
++|.|+||+|++|++++..|+..|. +++++|.+.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~--~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF--DLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecCc
Confidence 3699999999999999999999887 899999754
No 211
>PLN02256 arogenate dehydrogenase
Probab=97.06 E-value=0.0059 Score=58.74 Aligned_cols=68 Identities=19% Similarity=0.221 Sum_probs=47.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh-CCCCEEEE
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL-TGMDIVII 120 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al-~~aDiVIi 120 (358)
+..+.+||+|||. |.+|..++..+...|. +|..+|.+.....+.++ . +.. .+|.++.+ .++|+||+
T Consensus 32 ~~~~~~kI~IIG~-G~mG~slA~~L~~~G~--~V~~~d~~~~~~~a~~~---g----v~~---~~~~~e~~~~~aDvVil 98 (304)
T PLN02256 32 EKSRKLKIGIVGF-GNFGQFLAKTFVKQGH--TVLATSRSDYSDIAAEL---G----VSF---FRDPDDFCEEHPDVVLL 98 (304)
T ss_pred ccCCCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECccHHHHHHHc---C----Cee---eCCHHHHhhCCCCEEEE
Confidence 4446679999998 9999999999988775 89999987522112211 1 111 23555655 47999999
Q ss_pred cC
Q 018265 121 PA 122 (358)
Q Consensus 121 ~a 122 (358)
+.
T Consensus 99 av 100 (304)
T PLN02256 99 CT 100 (304)
T ss_pred ec
Confidence 85
No 212
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.016 Score=53.91 Aligned_cols=114 Identities=18% Similarity=0.130 Sum_probs=64.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEe-CCCcH---Hhhh-------C
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL-GQQQL---EDAL-------T 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~ 113 (358)
++|.|+||+|.+|+.++..|+..|. .+++.|++.. .....++.... ..+..+. .-+|. ++++ .
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW--RLALADVNEEGGEETLKLLREAG--GDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999887 8999997652 22223333221 1121111 11222 2222 3
Q ss_pred CCCEEEEcCCCCCCC---CCCH---HhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCC
Q 018265 114 GMDIVIIPAGVPRKP---GMTR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNP 165 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP 165 (358)
..|+||+.+|..... ..+. ...+..|.. +.+.+.+.+++.. .+.++++|.-
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~ 137 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASM 137 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECCh
Confidence 689999998864321 1111 123455543 4444555555543 3456665543
No 213
>PRK08589 short chain dehydrogenase; Validated
Probab=97.05 E-value=0.014 Score=54.67 Aligned_cols=155 Identities=14% Similarity=0.163 Sum_probs=84.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------h
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFL-GQQQ---LEDA-------L 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l 112 (358)
+.+++.|+||+|.+|.+++..|+..|. +|++++++. ......++.+.. ..+..+. .-+| .+++ +
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA--YVLAVDIAEAVSETVDKIKSNG--GKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHhcC--CeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 445899999999999999999999887 899999874 222233343221 1111111 0112 2222 2
Q ss_pred CCCCEEEEcCCCCCCCC----CCH---HhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 113 TGMDIVIIPAGVPRKPG----MTR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g----~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
...|++|+.+|.....+ .+. ...+..|+. +.+.+.+.+.+. .+.|++++......
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~------------ 146 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQA------------ 146 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcC------------
Confidence 35799999998743211 111 122334443 445555555443 36777776543221
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+.+..-.++.+...-..+.+.+|..++ +..|++.++
T Consensus 147 ~~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~v~~v 182 (272)
T PRK08589 147 ADLYRSGYNAAKGAVINFTKSIAIEYG--RDGIRANAI 182 (272)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence 122222344444334456677777764 345554443
No 214
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.05 E-value=0.0076 Score=64.02 Aligned_cols=92 Identities=20% Similarity=0.206 Sum_probs=61.4
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh--CCCCEEE
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL--TGMDIVI 119 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al--~~aDiVI 119 (358)
...+.|||.|+||+|++|++++..|...+. ++... . .|+.+. ..+...+ .+.|+||
T Consensus 376 ~~~~~mkiLVtGa~G~iG~~l~~~L~~~g~--~v~~~-~-------~~l~d~------------~~v~~~i~~~~pd~Vi 433 (668)
T PLN02260 376 PGKPSLKFLIYGRTGWIGGLLGKLCEKQGI--AYEYG-K-------GRLEDR------------SSLLADIRNVKPTHVF 433 (668)
T ss_pred CCCCCceEEEECCCchHHHHHHHHHHhCCC--eEEee-c-------cccccH------------HHHHHHHHhhCCCEEE
Confidence 344568999999999999999999988775 54211 0 011110 0011222 2789999
Q ss_pred EcCCCCCCC--C---CCHHhHHHHHHHHHHHHHHHHHhhCC
Q 018265 120 IPAGVPRKP--G---MTRDDLFNINAGIVKTLCEGIAKCCP 155 (358)
Q Consensus 120 i~ag~~~~~--g---~~r~~~~~~N~~i~~~i~~~i~~~~p 155 (358)
++|+....+ + ....+....|+.....+++..++...
T Consensus 434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~ 474 (668)
T PLN02260 434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL 474 (668)
T ss_pred ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC
Confidence 999864321 1 23456678899999999999998754
No 215
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.05 E-value=0.0073 Score=57.15 Aligned_cols=71 Identities=15% Similarity=0.210 Sum_probs=48.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~--~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
|..|||+|||+ |.+|.+++..|+..+. ..+|..+|++.. ....++.... .++. +.+..+++++||+||++
T Consensus 1 ~~~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~-~~~~~l~~~~---g~~~---~~~~~e~~~~aDvVila 72 (279)
T PRK07679 1 MSIQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE-TRLQELHQKY---GVKG---THNKKELLTDANILFLA 72 (279)
T ss_pred CCCCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH-HHHHHHHHhc---CceE---eCCHHHHHhcCCEEEEE
Confidence 34589999998 9999999999988762 347888887531 1222332211 1222 23556778999999998
Q ss_pred C
Q 018265 122 A 122 (358)
Q Consensus 122 a 122 (358)
.
T Consensus 73 v 73 (279)
T PRK07679 73 M 73 (279)
T ss_pred e
Confidence 4
No 216
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.011 Score=53.99 Aligned_cols=143 Identities=15% Similarity=0.133 Sum_probs=78.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEe-CCCcH----------Hhhh
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL-GQQQL----------EDAL 112 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~t~d~----------~~al 112 (358)
..+|.|+||+|.+|++++..|+..|. ++++++++.. .....++ . ..+..+. .-+|. .+.+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGA--RVAITGRDPASLEAARAEL---G--ESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHh---C--CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999887 8999988651 1111111 1 1111111 11221 1223
Q ss_pred CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCC
Q 018265 113 TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDP 185 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~ 185 (358)
...|+||+.+|..... ..+. ...+..|+.....+.+.+..+- ..+.+++++...... +.|.
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~------------~~~~ 146 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHI------------GMPN 146 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhcc------------CCCC
Confidence 4689999998864321 1111 2345677776777777666431 123445444322111 2333
Q ss_pred CcEEEeeeccHHHHHHHHHHHh
Q 018265 186 KRLLGVTMLDVVRANTFVAEVL 207 (358)
Q Consensus 186 ~kviG~t~lds~R~~~~lA~~l 207 (358)
...++.+......+-+.+++.+
T Consensus 147 ~~~Y~~sK~a~~~~~~~la~e~ 168 (249)
T PRK06500 147 SSVYAASKAALLSLAKTLSGEL 168 (249)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh
Confidence 3445554433344555666655
No 217
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.04 E-value=0.0036 Score=59.59 Aligned_cols=64 Identities=19% Similarity=0.274 Sum_probs=46.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||+|||. |.+|+.++..+...+. ++.++|++.... ..+.... +.. ..++++++++||+||++.
T Consensus 3 ~~IgviG~-G~mG~~~a~~l~~~g~--~v~~~d~~~~~~--~~~~~~g----~~~---~~~~~e~~~~~d~vi~~v 66 (296)
T PRK11559 3 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVYDRNPEAV--AEVIAAG----AET---ASTAKAVAEQCDVIITML 66 (296)
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHH--HHHHHCC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 68999998 9999999999998887 899999875221 1122111 111 245678889999999984
No 218
>PLN02996 fatty acyl-CoA reductase
Probab=97.04 E-value=0.01 Score=60.81 Aligned_cols=111 Identities=19% Similarity=0.114 Sum_probs=69.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhC-CCCcEEEEEeCCCc--hhH---HHHHhcCC------------C----CCeE
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT--PGV---TADISHMD------------T----NAVV 99 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~-~~~~el~L~D~~~~--~g~---~~dl~~~~------------~----~~~v 99 (358)
.+-+.+.|.|+||+||+|++++..|+.. .-...|.++.+... ... ..++.+.. . ..++
T Consensus 7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 4456678999999999999999988764 33456776665431 110 01111100 0 1233
Q ss_pred EEEeCCC----------c-HHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhh
Q 018265 100 RGFLGQQ----------Q-LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC 153 (358)
Q Consensus 100 ~~~~~t~----------d-~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~ 153 (358)
..+.+.- + ++++++++|+||++|+... ...........|+....++.+...+.
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 150 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKC 150 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 3332221 1 3456789999999987643 22344556788999999999988764
No 219
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=97.03 E-value=0.0097 Score=53.86 Aligned_cols=156 Identities=17% Similarity=0.198 Sum_probs=83.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEE--eCCCcHHhhh-------CCCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGF--LGQQQLEDAL-------TGMD 116 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~--~~t~d~~~al-------~~aD 116 (358)
|.|+|++|.+|+.++..|+++|. ++++++.+. ......++.+.......... +...++++++ ...|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA--KVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 47999999999999999999887 889998754 12222334322211111111 1111222333 3469
Q ss_pred EEEEcCCCCCCC---C---CCHHhHHHHHHHHHHHHHHHHHhhC---CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 117 IVIIPAGVPRKP---G---MTRDDLFNINAGIVKTLCEGIAKCC---PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 117 iVIi~ag~~~~~---g---~~r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
+||+.+|..... + ......+..|......+.+.+..+. ..+.+++++...... +.|..-
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~------------g~~~~~ 146 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM------------GNAGQA 146 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC------------CCCCCc
Confidence 999998864211 1 1123456677777777777665542 234666665543222 233333
Q ss_pred EEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 188 LLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 188 viG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
.++.+......+...+++.++ ...+.+.++.
T Consensus 147 ~y~~~k~a~~~~~~~l~~~~~--~~g~~~~~i~ 177 (239)
T TIGR01830 147 NYAASKAGVIGFTKSLAKELA--SRNITVNAVA 177 (239)
T ss_pred hhHHHHHHHHHHHHHHHHHHh--hcCeEEEEEE
Confidence 455544333345556666653 2344444443
No 220
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0087 Score=55.35 Aligned_cols=152 Identities=18% Similarity=0.143 Sum_probs=80.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhhC-------
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---LEDALT------- 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------- 113 (358)
++|.|+||+|.+|..++..|++.|. +|+++|++. ......++... .++..+.. -+| ..++++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGA--TLGLVARRTDALQAFAARLPKA---ARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcccC---CeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999887 899999875 11111222111 12222211 122 222222
Q ss_pred CCCEEEEcCCCCCCCC----CC---HHhHHHHHHHHH----HHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCC
Q 018265 114 GMDIVIIPAGVPRKPG----MT---RDDLFNINAGIV----KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g----~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~ 182 (358)
..|++|+.+|...... .+ -...+..|+.-. +.+.+.+.+.. .+.+++++.-... .+
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~------------~~ 144 (257)
T PRK07024 78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGV------------RG 144 (257)
T ss_pred CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhc------------CC
Confidence 3699999988643211 11 122344454433 34455665543 3556655542211 12
Q ss_pred CCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEE
Q 018265 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPV 218 (358)
Q Consensus 183 ~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v 218 (358)
.|..-.++.+......+...++..+. ...+++.+
T Consensus 145 ~~~~~~Y~asK~a~~~~~~~l~~e~~--~~gi~v~~ 178 (257)
T PRK07024 145 LPGAGAYSASKAAAIKYLESLRVELR--PAGVRVVT 178 (257)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhh--ccCcEEEE
Confidence 34334455554444456666665553 23454433
No 221
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.015 Score=54.00 Aligned_cols=111 Identities=16% Similarity=0.137 Sum_probs=62.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhC-------CCCEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALT-------GMDIV 118 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~-------~aDiV 118 (358)
.+|.|+||+|.+|++++..|+..|. +|++.+++...... ..+. ..+.. .....+++++++ ..|+|
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~~--~~~~---~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGY--RVFGTSRNPARAAP--IPGV---ELLELDVTDDASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCChhhccc--cCCC---eeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence 4799999999999999999999887 89999986411100 0110 00111 111123334443 46999
Q ss_pred EEcCCCCCCCC---CC---HHhHHHHHHHHHHHHH----HHHHhhCCCeEEEEecCC
Q 018265 119 IIPAGVPRKPG---MT---RDDLFNINAGIVKTLC----EGIAKCCPKAIVNLISNP 165 (358)
Q Consensus 119 Ii~ag~~~~~g---~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tNP 165 (358)
|+++|...... .+ -...+..|..-...+. +.+++.. .+.|++++..
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~ 133 (270)
T PRK06179 78 VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSV 133 (270)
T ss_pred EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCc
Confidence 99998753211 11 2334455554444444 4444443 3456666553
No 222
>PLN02712 arogenate dehydrogenase
Probab=97.01 E-value=0.0059 Score=64.82 Aligned_cols=68 Identities=16% Similarity=0.168 Sum_probs=48.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhh-CCCCEEEE
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDAL-TGMDIVII 120 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al-~~aDiVIi 120 (358)
++.+++||+|||. |.+|..++..|...|. +|..+|.+.....+.++ . +.. .+|+++.+ ++||+||+
T Consensus 48 ~~~~~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~A~~~---G----v~~---~~d~~e~~~~~aDvViL 114 (667)
T PLN02712 48 DNTTQLKIAIIGF-GNYGQFLAKTLISQGH--TVLAHSRSDHSLAARSL---G----VSF---FLDPHDLCERHPDVILL 114 (667)
T ss_pred ccCCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHc---C----CEE---eCCHHHHhhcCCCEEEE
Confidence 6777899999998 9999999999998886 89999986422111111 1 111 23555644 57999999
Q ss_pred cC
Q 018265 121 PA 122 (358)
Q Consensus 121 ~a 122 (358)
+.
T Consensus 115 av 116 (667)
T PLN02712 115 CT 116 (667)
T ss_pred cC
Confidence 84
No 223
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.011 Score=54.76 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=66.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeC-CCcH---Hhhh-------C
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLG-QQQL---EDAL-------T 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~-t~d~---~~al-------~ 113 (358)
++|.|+||+|.+|+.++..|+..+. +++++|++.. .....++.... ..+..+.. -+|. .+++ .
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA--QLVLAARNETRLASLAQELADHG--GEALVVPTDVSDAEACERLIEAAVARFG 77 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998887 8999998752 22222333221 12222111 1222 2222 3
Q ss_pred CCCEEEEcCCCCCCCC---C-CH---HhHHHHHHHHHHHHHHHHHhhC--CCeEEEEecCCC
Q 018265 114 GMDIVIIPAGVPRKPG---M-TR---DDLFNINAGIVKTLCEGIAKCC--PKAIVNLISNPV 166 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g---~-~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNP~ 166 (358)
+.|+||+++|...... . +. ...+..|+.....+.+....+. ..+.+++++...
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~ 139 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLA 139 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEeccc
Confidence 6799999988643211 1 11 2235566666555555554321 235566665543
No 224
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.01 E-value=0.006 Score=58.40 Aligned_cols=95 Identities=19% Similarity=0.212 Sum_probs=59.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~ 126 (358)
|||+|||. |.+|++++..|...+. +|.++|++... +..+..... .......++.++++++|+||++.-.
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~--~V~~~dr~~~~--~~~l~~~g~----~~~~s~~~~~~~~~~~dvIi~~vp~-- 69 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGH--DCVGYDHDQDA--VKAMKEDRT----TGVANLRELSQRLSAPRVVWVMVPH-- 69 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcCC----cccCCHHHHHhhcCCCCEEEEEcCc--
Confidence 68999998 9999999999999887 89999987522 222222111 0111112334456789999998311
Q ss_pred CCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCC
Q 018265 127 KPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPV 166 (358)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~ 166 (358)
..++++++.+.... ++.+||..+|..
T Consensus 70 --------------~~~~~v~~~l~~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 70 --------------GIVDAVLEELAPTLEKGDIVIDGGNSY 96 (298)
T ss_pred --------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 13344444554443 566777776654
No 225
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.01 E-value=0.0051 Score=56.90 Aligned_cols=108 Identities=17% Similarity=0.114 Sum_probs=62.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEe--CC---CcHHhhh-CCCCEEE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFL--GQ---QQLEDAL-TGMDIVI 119 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~--~t---~d~~~al-~~aDiVI 119 (358)
++||+|+||+|++|+.++..|+..+. +|+.+.++....... +.. ...+..+. .+ .++.+++ .++|+||
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~-~~~---~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGF--AVKAGVRDVDKAKTS-LPQ---DPSLQIVRADVTEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC--EEEEEecCHHHHHHh-ccc---CCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence 57999999999999999999998887 777776543111111 111 11122111 11 2344566 6899999
Q ss_pred EcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Q 018265 120 IPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI 162 (358)
Q Consensus 120 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~ 162 (358)
+++|.....+. ...+..|......+++.+.+.... .++++
T Consensus 91 ~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~~-~iV~i 130 (251)
T PLN00141 91 CATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGVT-RFILV 130 (251)
T ss_pred ECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCCC-EEEEE
Confidence 98875422111 111233444566677777665433 44444
No 226
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.024 Score=51.82 Aligned_cols=155 Identities=16% Similarity=0.174 Sum_probs=84.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEE-eCCCcHH---h-------h
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGF-LGQQQLE---D-------A 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~-~~t~d~~---~-------a 111 (358)
+.++|.|+||+|.+|.+++..|+..|. +++++|++.. .....++.+.. ..+..+ ..-+|.+ + .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA--SVVVADINAEGAERVAKQIVADG--GTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999887 8999998751 22222232211 111111 1112321 1 1
Q ss_pred hCCCCEEEEcCCCCC----CC--CCCH---HhHHHHHHHHHHHHHHHHHhhC---CCeEEEEecCCCCccHHHHHHHHHH
Q 018265 112 LTGMDIVIIPAGVPR----KP--GMTR---DDLFNINAGIVKTLCEGIAKCC---PKAIVNLISNPVNSTVPIAAEVFKK 179 (358)
Q Consensus 112 l~~aDiVIi~ag~~~----~~--g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP~d~~t~~~~~~~~~ 179 (358)
+...|+||+++|... ++ ..+. .+.+..|+.....+.+.+..+. ..+.+++++.-..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~------------ 148 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA------------ 148 (250)
T ss_pred hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc------------
Confidence 236899999998632 11 1121 2234566665555555555432 2346666553211
Q ss_pred hCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 180 ~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+++...++.+......+...+++.+. ...+.+.++.
T Consensus 149 ---~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~v~~v~ 184 (250)
T PRK07774 149 ---WLYSNFYGLAKVGLNGLTQQLARELG--GMNIRVNAIA 184 (250)
T ss_pred ---cCCccccHHHHHHHHHHHHHHHHHhC--ccCeEEEEEe
Confidence 12223455554444456666676664 3445554443
No 227
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.99 E-value=0.0036 Score=59.57 Aligned_cols=63 Identities=14% Similarity=0.261 Sum_probs=46.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
||+|||. |.+|+.++..|+..|. +|.++|++... ...+..... . ..++.++++++||+||++.
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~--~V~~~dr~~~~--~~~~~~~g~----~---~~~~~~~~~~~aDivi~~v 63 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGY--QLHVTTIGPEV--ADELLAAGA----V---TAETARQVTEQADVIFTMV 63 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHCCC----c---ccCCHHHHHhcCCEEEEec
Confidence 6999998 9999999999998887 99999987521 122222211 1 1235678899999999984
No 228
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.99 E-value=0.00083 Score=63.88 Aligned_cols=98 Identities=23% Similarity=0.268 Sum_probs=59.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~ 126 (358)
|||.|+||+|++|+++...+...++ +++.++... .|+.+... + .++-+. .+.|+||++|+...
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~--~v~~~~r~~-----~dl~d~~~---~------~~~~~~-~~pd~Vin~aa~~~ 63 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY--EVIATSRSD-----LDLTDPEA---V------AKLLEA-FKPDVVINCAAYTN 63 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE--EEEEESTTC-----S-TTSHHH---H------HHHHHH-H--SEEEE------
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC--EEEEeCchh-----cCCCCHHH---H------HHHHHH-hCCCeEeccceeec
Confidence 7999999999999999999998776 788886542 22222110 0 011122 25899999987642
Q ss_pred CC--CCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 127 KP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 127 ~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
.. ..........|......+++...+. ++.+|.+|
T Consensus 64 ~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~~~li~~S 100 (286)
T PF04321_consen 64 VDACEKNPEEAYAINVDATKNLAEACKER--GARLIHIS 100 (286)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T-EEEEEE
T ss_pred HHhhhhChhhhHHHhhHHHHHHHHHHHHc--CCcEEEee
Confidence 11 1234556678999999999999875 45666553
No 229
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.98 E-value=0.011 Score=53.63 Aligned_cols=36 Identities=28% Similarity=0.466 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+.++|+|+||+|.+|..++..|+..|. ++.+++++.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~--~v~~~~r~~ 39 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA--KVVIYDSNE 39 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCh
Confidence 346899999999999999999999887 799999875
No 230
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.97 E-value=0.0032 Score=59.95 Aligned_cols=75 Identities=23% Similarity=0.319 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc-
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP- 121 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~- 121 (358)
+..||+|+|+ |.+|++++..|...+. .+|.++|++. +++.+.++.+.. +..... ...+++++++++|+||.+
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~-~~I~I~nR~~~ka~~la~~l~~~~--~~~~~~-~~~~~~~~~~~aDiVInaT 200 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGV-ERLTIFDVDPARAAALADELNARF--PAARAT-AGSDLAAALAAADGLVHAT 200 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhC--CCeEEE-eccchHhhhCCCCEEEECC
Confidence 4468999998 9999999999998874 4899999986 344445554332 222222 123455678999999997
Q ss_pred -CCC
Q 018265 122 -AGV 124 (358)
Q Consensus 122 -ag~ 124 (358)
+|+
T Consensus 201 p~Gm 204 (284)
T PRK12549 201 PTGM 204 (284)
T ss_pred cCCC
Confidence 454
No 231
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.96 E-value=0.0065 Score=56.38 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+..++.|+||+|.+|++++..|+..|. +|+++|++.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 39 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA--RVAVLDKSA 39 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 346899999999999999999999987 899999865
No 232
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0096 Score=55.70 Aligned_cols=111 Identities=14% Similarity=-0.011 Sum_probs=61.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeC-CCc---HHhh-------hCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG-QQQ---LEDA-------LTGM 115 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l~~a 115 (358)
++|.|+||+|.+|++++..|+..|. +|++.+.+.... .++.+... ..+..+.. -+| .+++ +...
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGD--RVVATARDTATL--ADLAEKYG-DRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHhcc-CCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999998886 899999765211 11111100 11111100 112 1122 2467
Q ss_pred CEEEEcCCCCCCC---CCC---HHhHHHHHHHH----HHHHHHHHHhhCCCeEEEEec
Q 018265 116 DIVIIPAGVPRKP---GMT---RDDLFNINAGI----VKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 116 DiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t 163 (358)
|.||+++|..... ..+ -...+..|+.. .+.+.+.+++... ..+++++
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~vs 135 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRS-GHIIQIS 135 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CEEEEEc
Confidence 9999999865321 111 22334556554 4555555555443 3455554
No 233
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.94 E-value=0.029 Score=51.29 Aligned_cols=115 Identities=15% Similarity=0.202 Sum_probs=64.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh------
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFLG-QQQ---LEDAL------ 112 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al------ 112 (358)
..++.|+||+|.+|++++..|+..+. ++++.+... ......++.+.. .++..+.. -+| +.+++
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGA--KVVINYNSSKEAAENLVNELGKEG--HDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEcCCcHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999998886 776655432 122223333221 22222211 122 22223
Q ss_pred -CCCCEEEEcCCCCCCCC------CCHHhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 018265 113 -TGMDIVIIPAGVPRKPG------MTRDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~g------~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 164 (358)
...|+||+++|...... +.-.+.+..|......+.+.+..+ ...+.+++++.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 143 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS 143 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 34799999998643211 112334566766655555555433 23456666654
No 234
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.94 E-value=0.037 Score=50.62 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=30.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
++|.|+||+|++|+.++..|+..|. ++++++++.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~--~v~~~~r~~ 35 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA--NVVVNDLGE 35 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 3799999999999999999998887 899999875
No 235
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.94 E-value=0.015 Score=53.56 Aligned_cols=115 Identities=20% Similarity=0.268 Sum_probs=64.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---HHhh-------h
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---LEDA-------L 112 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l 112 (358)
..++.|+||+|.+|.+++..|+..|. ++++.|++. ......++.+.. ..+..+.. -+| .++. +
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~--~vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGA--EIIINDITAERAELAVAKLRQEG--IKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 34899999999999999999999887 999999875 222233343321 11111111 112 1122 2
Q ss_pred CCCCEEEEcCCCCCC-C--CCC---HHhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 018265 113 TGMDIVIIPAGVPRK-P--GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 164 (358)
...|+||+++|.... + ..+ -...+..|......+.+.+..+ ...+.++++|.
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 145 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICS 145 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 357999999986421 1 111 1224555655544444444432 23356666654
No 236
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=96.93 E-value=0.011 Score=56.88 Aligned_cols=114 Identities=13% Similarity=0.073 Sum_probs=70.0
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHH-H----HhcC-----CCC-CeEEEEeCC----------C
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-D----ISHM-----DTN-AVVRGFLGQ----------Q 106 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~-d----l~~~-----~~~-~~v~~~~~t----------~ 106 (358)
+|.|+||+|++|++++..|+..+...+|+++.++....... . +... ... ..+..+.+. .
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999887434788887754211111 1 1110 000 233333221 1
Q ss_pred cHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 107 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 107 d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
++.+..+++|+||++++.... .....++...|+.....+++...+..... ++++|
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~~~~-~v~iS 135 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGRAKP-LHYVS 135 (367)
T ss_pred HHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCCCce-EEEEc
Confidence 344556899999999875421 22334556788888888888887765443 44433
No 237
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.93 E-value=0.0058 Score=59.47 Aligned_cols=93 Identities=16% Similarity=0.198 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
...++|+|||. |.+|+.+|..|...|. +|+.+|++... ..+. +. ...++++++++||+|++..-
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~--~V~~~d~~~~~--~~~~--------~~---~~~~l~ell~~aDiVil~lP 207 (330)
T PRK12480 144 VKNMTVAIIGT-GRIGAATAKIYAGFGA--TITAYDAYPNK--DLDF--------LT---YKDSVKEAIKDADIISLHVP 207 (330)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCChhH--hhhh--------hh---ccCCHHHHHhcCCEEEEeCC
Confidence 34568999998 9999999999987776 99999986411 0110 11 12467899999999999752
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 165 (358)
.. ..+..++. .+.+....|++++|+++-=
T Consensus 208 ~t-----------~~t~~li~--~~~l~~mk~gavlIN~aRG 236 (330)
T PRK12480 208 AN-----------KESYHLFD--KAMFDHVKKGAILVNAARG 236 (330)
T ss_pred Cc-----------HHHHHHHh--HHHHhcCCCCcEEEEcCCc
Confidence 21 11122221 1222223478899988643
No 238
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.024 Score=51.85 Aligned_cols=145 Identities=16% Similarity=0.092 Sum_probs=76.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLG-QQQ---LEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al------ 112 (358)
+..++.|+||+|.+|++++..|+..|. ++++++.+.. .....++. . ...+..+.. -+| .++++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~~~~~~~i~~~ 78 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA--RVVVADRDAEAAERVAAAIA-A--GGRAFARQGDVGSAEAVEALVDFVAAR 78 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC--eEEEecCCHHHHHHHHHHHh-c--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999886 8999987652 11222222 1 112222111 122 22222
Q ss_pred -CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHH----HHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 113 -TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVK----TLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
.+.|+||+.+|..... ..+. ...+..|..... .+.+.+++.. ...+++++.-....
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~------------ 145 (252)
T PRK06138 79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALA------------ 145 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhcc------------
Confidence 3789999999864211 1111 122455555443 3444444333 34556554432111
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHh
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVL 207 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l 207 (358)
+.+....++.+......+...+++.+
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~l~~~~ 171 (252)
T PRK06138 146 GGRGRAAYVASKGAIASLTRAMALDH 171 (252)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 22233344554433345556666665
No 239
>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases. It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.
Probab=96.92 E-value=0.0043 Score=57.22 Aligned_cols=70 Identities=10% Similarity=0.065 Sum_probs=46.5
Q ss_pred HHHHHHHccCCCCCcEEEeeE-EeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018265 279 KFADACLRGLRGDAGVIECAY-VASTV---TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKG 352 (358)
Q Consensus 279 ~ii~ai~~~~~~~~~v~~~s~-~~g~~---~~~~~~svPv~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~l~~~~~~~ 352 (358)
.++++|.+|.+ .++.+++ .+|.+ |+|.++++||+|+++|+.++.. ++|++..++++......-+-.++.+
T Consensus 141 ~~i~~i~~~~~---~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~~~~e~L~veAa 214 (232)
T PF11975_consen 141 AAIEAIYNDKP---KRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQVKAYERLTVEAA 214 (232)
T ss_dssp HHHHHHHHSSE---EEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCC---eEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44455577754 3555554 57775 8899999999999999999776 6999999998877665555444443
No 240
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.92 E-value=0.015 Score=61.90 Aligned_cols=151 Identities=18% Similarity=0.138 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCC---cHHhhhC----
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQ---QLEDALT---- 113 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~---d~~~al~---- 113 (358)
.+.++|.|+||+|.+|++++..|++.|. +|+++|++. ......++........+..+. .-+ +.+++++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga--~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGA--HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4456899999999999999999999887 999999875 222222332110001111111 112 2233333
Q ss_pred ---CCCEEEEcCCCCCC-C--CCCHH---hHHHHHH----HHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 114 ---GMDIVIIPAGVPRK-P--GMTRD---DLFNINA----GIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 114 ---~aDiVIi~ag~~~~-~--g~~r~---~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
+.|+||+++|.... + ..+.. ..+..|+ .+.+...+.+++....+.+++++.-....
T Consensus 490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~----------- 558 (676)
T TIGR02632 490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY----------- 558 (676)
T ss_pred hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC-----------
Confidence 68999999986432 1 11111 1122333 23445566665544445566554322111
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhC
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
+.+..-.++.+......+.+.++..++
T Consensus 559 -~~~~~~aY~aSKaA~~~l~r~lA~el~ 585 (676)
T TIGR02632 559 -AGKNASAYSAAKAAEAHLARCLAAEGG 585 (676)
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 122223455555455566677777764
No 241
>PRK06398 aldose dehydrogenase; Validated
Probab=96.92 E-value=0.017 Score=53.50 Aligned_cols=151 Identities=17% Similarity=0.148 Sum_probs=83.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhh-------hCCCCE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDA-------LTGMDI 117 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~a-------l~~aDi 117 (358)
+.++|.|+||+|.+|.+++..|+..|. +|+++|++........... .++. ...+.+++ +...|+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~----~D~~---~~~~i~~~~~~~~~~~~~id~ 75 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS--NVINFDIKEPSYNDVDYFK----VDVS---NKEQVIKGIDYVISKYGRIDI 75 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCccccCceEEEE----ccCC---CHHHHHHHHHHHHHHcCCCCE
Confidence 345899999999999999999999887 8899987652110000000 0010 01122222 246899
Q ss_pred EEEcCCCCCCC---CCCH---HhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 118 VIIPAGVPRKP---GMTR---DDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 118 VIi~ag~~~~~---g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
+|+.+|..... ..+. ...+..|+.. .+.+.+.+.+. ..+.||+++.-... ...+..-
T Consensus 76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~------------~~~~~~~ 142 (258)
T PRK06398 76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASVQSF------------AVTRNAA 142 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcchhc------------cCCCCCc
Confidence 99999864321 1122 2234556554 44444444432 34666766542211 1233444
Q ss_pred EEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 188 LLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 188 viG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
.++.+......+-+.++..++ +. |++..+.
T Consensus 143 ~Y~~sKaal~~~~~~la~e~~--~~-i~vn~i~ 172 (258)
T PRK06398 143 AYVTSKHAVLGLTRSIAVDYA--PT-IRCVAVC 172 (258)
T ss_pred hhhhhHHHHHHHHHHHHHHhC--CC-CEEEEEe
Confidence 566655444556777777775 23 6555544
No 242
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.92 E-value=0.012 Score=53.72 Aligned_cols=115 Identities=20% Similarity=0.266 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC----CCcHHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG----QQQLEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~----t~d~~~al------ 112 (358)
+.++|.|+||+|++|.+++..|+..|. +|++++++. ......++.... ..+..+.. ..++++++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA--EVIVVDICGDDAAATAELVEAAG--GKARARQVDVRDRAALKAAVAAGVED 80 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 446899999999999999999999887 899999875 122222333221 22222211 11222323
Q ss_pred -CCCCEEEEcCCCCCC-C--CCCH---HhHHHHHHHHHHHHHHHH----HhhCCCeEEEEecC
Q 018265 113 -TGMDIVIIPAGVPRK-P--GMTR---DDLFNINAGIVKTLCEGI----AKCCPKAIVNLISN 164 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN 164 (358)
...|+||+++|.... + ..+. ...+..|+.....+.+.+ .+.. ...+++++.
T Consensus 81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss 142 (251)
T PRK12826 81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSS 142 (251)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEec
Confidence 368999999876431 1 1222 223455655555555444 4433 345555543
No 243
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.016 Score=55.73 Aligned_cols=174 Identities=17% Similarity=0.072 Sum_probs=89.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEe-CCCcH---Hh------
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL-GQQQL---ED------ 110 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~t~d~---~~------ 110 (358)
+++.+++.|+||+|.+|..++..|+..|. .|++.+++.. .....++........+..+. .-.|+ ++
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~ 88 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGA--EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR 88 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence 34556899999999999999999999887 8999998762 22223343211111222211 11222 11
Q ss_pred -hhCCCCEEEEcCCCCCCC--CCC---HHhHHHHHH----HHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 111 -ALTGMDIVIIPAGVPRKP--GMT---RDDLFNINA----GIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 111 -al~~aDiVIi~ag~~~~~--g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
.....|++|+.||....+ ..+ -...+..|. -+.+.+.+.+++. .+.|++++.-......+-..-+...
T Consensus 89 ~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~~~ 166 (313)
T PRK05854 89 AEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWE 166 (313)
T ss_pred HhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCccccccc
Confidence 124589999999864321 111 122344443 3455556655543 3556665543221100000000000
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
..++....++.+.+....+-..+++++......|.+..+.
T Consensus 167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~ 206 (313)
T PRK05854 167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAH 206 (313)
T ss_pred ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEe
Confidence 1133334566666666666677777654444455554444
No 244
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.92 E-value=0.0057 Score=60.56 Aligned_cols=53 Identities=19% Similarity=0.372 Sum_probs=43.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
.+||+|||+.|.+|..++..|...|+ +|.++|.+.. ++.++++++||+||++.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~--~V~~~d~~~~----------------------~~~~~~~~~aDlVilav 150 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY--QVRILEQDDW----------------------DRAEDILADAGMVIVSV 150 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC--eEEEeCCCcc----------------------hhHHHHHhcCCEEEEeC
Confidence 36999999559999999999999887 8999997420 13467789999999985
No 245
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.91 E-value=0.0074 Score=56.98 Aligned_cols=66 Identities=20% Similarity=0.330 Sum_probs=44.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||+|||. |.+|..++..|...++..+|..+|+++.. ...+..... ... ..++.++ .+||+||++.
T Consensus 1 m~I~iIG~-G~mG~sla~~l~~~g~~~~v~~~d~~~~~--~~~~~~~g~---~~~---~~~~~~~-~~aD~Vilav 66 (275)
T PRK08507 1 MKIGIIGL-GLMGGSLGLALKEKGLISKVYGYDHNELH--LKKALELGL---VDE---IVSFEEL-KKCDVIFLAI 66 (275)
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCCEEEEEcCCHHH--HHHHHHCCC---Ccc---cCCHHHH-hcCCEEEEeC
Confidence 58999998 99999999999988865578889986521 111221111 111 1244554 4699999985
No 246
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.046 Score=50.29 Aligned_cols=149 Identities=12% Similarity=0.065 Sum_probs=77.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcE-EEEEeCCCc--hhHHHHHhcCCCCCeEEEEe-CCCcH---Hhhh----
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNT--PGVTADISHMDTNAVVRGFL-GQQQL---EDAL---- 112 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~e-l~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~t~d~---~~al---- 112 (358)
.+..+|.|+||+|.+|+.++..|...|. + |+++|++.. .....++... ...+..+. .-+|. .+++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAAD 79 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence 3456899999999999999999998886 5 999998651 2222223211 12222111 11222 2222
Q ss_pred ---CCCCEEEEcCCCCCCC---CCCHH---hHHHHHHHHHHHH----HHHHHhhCCCeEEEEecCCCCccHHHHHHHHHH
Q 018265 113 ---TGMDIVIIPAGVPRKP---GMTRD---DLFNINAGIVKTL----CEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKK 179 (358)
Q Consensus 113 ---~~aDiVIi~ag~~~~~---g~~r~---~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~ 179 (358)
.+.|+||+++|..... ..+.. ..+..|+.-...+ .+.+.+....+.+++++.-....
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~---------- 149 (260)
T PRK06198 80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG---------- 149 (260)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc----------
Confidence 3689999999865321 11222 2245555444444 44444433335566655433211
Q ss_pred hCCCCCCcEEEeeeccHHHHHHHHHHHhC
Q 018265 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 180 ~~~~p~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
+.+....++.+......+-..++..+.
T Consensus 150 --~~~~~~~Y~~sK~a~~~~~~~~a~e~~ 176 (260)
T PRK06198 150 --GQPFLAAYCASKGALATLTRNAAYALL 176 (260)
T ss_pred --CCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence 222233455544333345555666553
No 247
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.91 E-value=0.0075 Score=58.27 Aligned_cols=111 Identities=16% Similarity=0.141 Sum_probs=70.6
Q ss_pred hHHHHHHHHHhCCCCcEEEEEeCCCc--h--------hH--HHH----Hh-cCC--------CCCeEEEEeCCCcHHhhh
Q 018265 58 IGQPLAMLMKINPLVSVLHLYDVVNT--P--------GV--TAD----IS-HMD--------TNAVVRGFLGQQQLEDAL 112 (358)
Q Consensus 58 vG~~~a~~l~~~~~~~el~L~D~~~~--~--------g~--~~d----l~-~~~--------~~~~v~~~~~t~d~~~al 112 (358)
+|+.+|..++..|+ +|+|+|++.. . +. ..+ +. ... ...+++.. .+.|+++++
T Consensus 1 MG~giA~~~a~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~~a~ 77 (314)
T PRK08269 1 MGQGIALAFAFAGH--DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVV-ARDGAADAL 77 (314)
T ss_pred CcHHHHHHHHhCCC--eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEee-cCcchHHHh
Confidence 46889999999998 9999999861 1 11 001 11 100 01234442 123467889
Q ss_pred CCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe
Q 018265 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~ 191 (358)
++||+||.+. .+|..+.+++..++.+.+ |++++ .||-......-+ ...... ++|++|+
T Consensus 78 ~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~l----a~~~~~-p~r~~g~ 136 (314)
T PRK08269 78 ADADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDL----QRHVAH-PERFLNA 136 (314)
T ss_pred ccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHH----HhhcCC-cccEEEE
Confidence 9999999984 557788888999999988 56644 777777654322 222232 4678777
Q ss_pred e
Q 018265 192 T 192 (358)
Q Consensus 192 t 192 (358)
.
T Consensus 137 H 137 (314)
T PRK08269 137 H 137 (314)
T ss_pred e
Confidence 4
No 248
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.027 Score=51.68 Aligned_cols=76 Identities=13% Similarity=0.139 Sum_probs=47.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHH-HhcCCCCCeEEEE----eCCCcHHhhhC-CCCEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTAD-ISHMDTNAVVRGF----LGQQQLEDALT-GMDIVI 119 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~-g~~~d-l~~~~~~~~v~~~----~~t~d~~~al~-~aDiVI 119 (358)
++|.|+||+|.+|+.++..|+..|. .+++.+.+... ....+ ..... ..+... ....++..++. +.|+||
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~id~vi 78 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH--NVIAGVQIAPQVTALRAEAARRG--LALRVEKLDLTDAIDRAQAAEWDVDVLL 78 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcceEEEeeCCCHHHHHHHhcCCCCEEE
Confidence 3799999999999999999999886 88888876411 11111 11111 112211 11123334444 899999
Q ss_pred EcCCCCC
Q 018265 120 IPAGVPR 126 (358)
Q Consensus 120 i~ag~~~ 126 (358)
+.+|...
T Consensus 79 ~~ag~~~ 85 (257)
T PRK09291 79 NNAGIGE 85 (257)
T ss_pred ECCCcCC
Confidence 9998653
No 249
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.025 Score=52.64 Aligned_cols=116 Identities=18% Similarity=0.163 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCC-CCeEEEEeCCCc-------HHhhhCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDT-NAVVRGFLGQQQ-------LEDALTG 114 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~-~~~v~~~~~t~d-------~~~al~~ 114 (358)
+.++|.|+||+|.+|..++..|+..|. .+++.+++.. .....++..... ..++. ...+ ..+.+.+
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGA--RVAIGDLDEALAKETAAELGLVVGGPLDVT---DPASFAAFLDAVEADLGP 78 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhccceEEEccCC---CHHHHHHHHHHHHHHcCC
Confidence 345899999999999999999999887 8899988652 111222221100 00110 0011 1122356
Q ss_pred CCEEEEcCCCCCCC---CCC---HHhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCCC
Q 018265 115 MDIVIIPAGVPRKP---GMT---RDDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPV 166 (358)
Q Consensus 115 aDiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~ 166 (358)
.|++|+.+|..... ..+ -...+..|+. +.+.+.+.+.+. ..+.|+++|.-.
T Consensus 79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~ 139 (273)
T PRK07825 79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVASLA 139 (273)
T ss_pred CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcCcc
Confidence 89999999864321 111 1223455654 444455555443 345677766543
No 250
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.89 E-value=0.038 Score=50.03 Aligned_cols=117 Identities=23% Similarity=0.299 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh-----
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTNAVVRGFLG-QQQ---LEDAL----- 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al----- 112 (358)
+.++|.|+|++|++|++++..|+..|. ++++...+.. .....++.... ..+..+.. -.| +.+++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA--NVVINYASSEAGAEALVAEIGALG--GKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 456999999999999999999998887 7766665442 11222232111 12221110 112 22222
Q ss_pred --CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHHHHhhC---CCeEEEEecCC
Q 018265 113 --TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKCC---PKAIVNLISNP 165 (358)
Q Consensus 113 --~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP 165 (358)
.+.|.||+++|..... ..+. ...+..|+.....+.+.+..+. ....+++++..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~ 143 (248)
T PRK05557 80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSV 143 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccc
Confidence 3689999998864321 1111 1234456666666666665432 23456665543
No 251
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.02 Score=52.38 Aligned_cols=145 Identities=17% Similarity=0.130 Sum_probs=80.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhCC----CCEEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV-VRG-FLGQQQLEDALTG----MDIVII 120 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~t~d~~~al~~----aDiVIi 120 (358)
.+|.|+||+|.+|..++..|+..|. +++++|++... ..++.+...... +.. .+...+.+++++. .|.+|+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW--QVIACGRNQSV--LDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 3799999999999999999999887 89999986521 111211110011 111 1111233334433 477888
Q ss_pred cCCCCCCCC---CCH---HhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEeee
Q 018265 121 PAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTM 193 (358)
Q Consensus 121 ~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~ 193 (358)
.+|...... .+. ...+..|......+.+.+..+- +...+++++.-.... +.|....++.+.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~------------~~~~~~~Y~asK 145 (240)
T PRK06101 78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL------------ALPRAEAYGASK 145 (240)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc------------CCCCCchhhHHH
Confidence 777432111 122 2346677777777777766542 344566655432211 234444566665
Q ss_pred ccHHHHHHHHHHHh
Q 018265 194 LDVVRANTFVAEVL 207 (358)
Q Consensus 194 lds~R~~~~lA~~l 207 (358)
.....+.+.++..+
T Consensus 146 ~a~~~~~~~l~~e~ 159 (240)
T PRK06101 146 AAVAYFARTLQLDL 159 (240)
T ss_pred HHHHHHHHHHHHHH
Confidence 55556666676555
No 252
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.003 Score=58.40 Aligned_cols=150 Identities=16% Similarity=0.199 Sum_probs=81.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEe-CCCc----------HHhhhC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFL-GQQQ----------LEDALT 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~t~d----------~~~al~ 113 (358)
+.++|.|+||+|.+|+.++..|+..|. +|++++++.... +.. .+..+. .-.| ..+.+.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~r~~~~~----~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA--RVVTTARSRPDD----LPE-----GVEFVAADLTTAEGCAAVARAVLERLG 76 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC--EEEEEeCChhhh----cCC-----ceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 456899999999999999999999887 899999865211 000 011100 0011 122345
Q ss_pred CCCEEEEcCCCCCCC-C----CC---HHhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 114 GMDIVIIPAGVPRKP-G----MT---RDDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~-g----~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
..|+||+.+|..... + .+ -...+..|+. +.+.+.+.+++.. .+.+|+++......
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~------------ 143 (260)
T PRK06523 77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRL------------ 143 (260)
T ss_pred CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccC------------
Confidence 789999999853211 1 11 1223444544 3445555555543 35666666543221
Q ss_pred CCC-CCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 182 TYD-PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 182 ~~p-~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.+ ....++.+......+.+.++..++ +..|++.++-
T Consensus 144 ~~~~~~~~Y~~sK~a~~~l~~~~a~~~~--~~gi~v~~i~ 181 (260)
T PRK06523 144 PLPESTTAYAAAKAALSTYSKSLSKEVA--PKGVRVNTVS 181 (260)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHh--hcCcEEEEEe
Confidence 122 223455544444456666776653 3455554443
No 253
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.015 Score=53.39 Aligned_cols=37 Identities=22% Similarity=0.202 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
++.++|.|+||+|.+|++++..|+..|. +|++++++.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~--~Vi~~~r~~ 43 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA--KVVLASRRV 43 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4456999999999999999999998887 899998865
No 254
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.87 E-value=0.019 Score=52.26 Aligned_cols=115 Identities=22% Similarity=0.279 Sum_probs=62.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-eCCCc--hhHHHHHhcCCCCCeEEEEeC-CCc---HHhhhC-----
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTNAVVRGFLG-QQQ---LEDALT----- 113 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~-D~~~~--~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al~----- 113 (358)
+++|.|+||+|.+|+.++..++..|. ++++. +.+.. .....++... ...+..... -+| +.++++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA--KVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999998886 77777 87651 1112222221 122222211 122 222232
Q ss_pred --CCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHHHHhhC---CCeEEEEecC
Q 018265 114 --GMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKCC---PKAIVNLISN 164 (358)
Q Consensus 114 --~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 164 (358)
..|+||+.+|..... ..+. ...+..|..-...+.+.+.... ....+++++.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS 142 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISS 142 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence 789999998864211 1111 2334566665444544443321 1234555554
No 255
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.023 Score=51.68 Aligned_cols=148 Identities=16% Similarity=0.102 Sum_probs=78.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhh---CCCCEEE
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDAL---TGMDIVI 119 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al---~~aDiVI 119 (358)
++.+++.|+||+|.+|++++..++..|. ++++++++... ..++........+.. .+...+..+++ ...|+||
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~--~V~~~~r~~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGA--RVVAAARNAAA--LDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence 3446899999999999999999999887 89999986521 112211100011111 11111223333 3479999
Q ss_pred EcCCCCCCC---CCC---HHhHHHHHHHHHHHHHHHHHhh----CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEE
Q 018265 120 IPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKC----CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLL 189 (358)
Q Consensus 120 i~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kvi 189 (358)
+.+|..... ..+ -...+..|+.-...+++.+.+. +..+.+++++..... .+.+....+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~~~y 150 (245)
T PRK07060 83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAAL------------VGLPDHLAY 150 (245)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHc------------CCCCCCcHh
Confidence 998864321 111 1223456666665566555543 222566666542211 122222334
Q ss_pred EeeeccHHHHHHHHHHHh
Q 018265 190 GVTMLDVVRANTFVAEVL 207 (358)
Q Consensus 190 G~t~lds~R~~~~lA~~l 207 (358)
+.+.....++-+.+++.+
T Consensus 151 ~~sK~a~~~~~~~~a~~~ 168 (245)
T PRK07060 151 CASKAALDAITRVLCVEL 168 (245)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444433445566666665
No 256
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.87 E-value=0.0085 Score=56.76 Aligned_cols=100 Identities=17% Similarity=0.117 Sum_probs=62.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~--~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
++||+|||+ |.+|.+++..|...+. ..+|.++|.+... ....+... ...+.. +.|..++++++|+||++..
T Consensus 1 m~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~-~~~~l~~~--~~~~~~---~~~~~e~~~~aDvVilavp 73 (277)
T PRK06928 1 MEKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNE-HFNQLYDK--YPTVEL---ADNEAEIFTKCDHSFICVP 73 (277)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHH-HHHHHHHH--cCCeEE---eCCHHHHHhhCCEEEEecC
Confidence 368999998 9999999999988762 2488999876411 12222211 112222 2455677899999998852
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCc
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNS 168 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~ 168 (358)
...+.++++.+..+- ++..||.+.|-++.
T Consensus 74 ----------------p~~~~~vl~~l~~~l~~~~~ivS~~aGi~~ 103 (277)
T PRK06928 74 ----------------PLAVLPLLKDCAPVLTPDRHVVSIAAGVSL 103 (277)
T ss_pred ----------------HHHHHHHHHHHHhhcCCCCEEEEECCCCCH
Confidence 123445555565443 45566666666544
No 257
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.86 E-value=0.0046 Score=52.14 Aligned_cols=77 Identities=22% Similarity=0.322 Sum_probs=53.5
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEE
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVI 119 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVI 119 (358)
++.+..||+|+|| |.+|..++..|...|. .+|.+++++.. ...+..+ ....+.... ..++.+.+.++|+||
T Consensus 8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~-~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~-~~~~~~~~~~~DivI 80 (135)
T PF01488_consen 8 GDLKGKRVLVIGA-GGAARAVAAALAALGA-KEITIVNRTPERAEALAEEF----GGVNIEAIP-LEDLEEALQEADIVI 80 (135)
T ss_dssp STGTTSEEEEESS-SHHHHHHHHHHHHTTS-SEEEEEESSHHHHHHHHHHH----TGCSEEEEE-GGGHCHHHHTESEEE
T ss_pred CCcCCCEEEEECC-HHHHHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHc----Cccccceee-HHHHHHHHhhCCeEE
Confidence 3456679999998 9999999999999875 47999998652 2222233 112344432 356777899999999
Q ss_pred EcCCCC
Q 018265 120 IPAGVP 125 (358)
Q Consensus 120 i~ag~~ 125 (358)
.+.+.+
T Consensus 81 ~aT~~~ 86 (135)
T PF01488_consen 81 NATPSG 86 (135)
T ss_dssp E-SSTT
T ss_pred EecCCC
Confidence 986554
No 258
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.85 E-value=0.0077 Score=56.99 Aligned_cols=68 Identities=13% Similarity=0.163 Sum_probs=47.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~--~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
++||+|||+ |.+|++++..|+..+. ..+|..+|++.. ....+.+.. . +.. .++..+.+++||+||++.
T Consensus 2 ~~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~--~~~~l~~~~-g--~~~---~~~~~e~~~~aDiIiLav 71 (272)
T PRK12491 2 NKQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVS--NLKNASDKY-G--ITI---TTNNNEVANSADILILSI 71 (272)
T ss_pred CCeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHH--HHHHHHHhc-C--cEE---eCCcHHHHhhCCEEEEEe
Confidence 358999998 9999999999998874 357999987642 222232211 1 222 234567789999999985
No 259
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.85 E-value=0.021 Score=53.05 Aligned_cols=156 Identities=13% Similarity=0.157 Sum_probs=84.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCcH---Hhh-------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQL---EDA------- 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d~---~~a------- 111 (358)
+..++.|+||+|.+|.+++..|+..|. ++++.|.+. ......++.... .++..+. .-+|. +++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA--TIVFNDINQELVDKGLAAYRELG--IEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 445899999999999999999998887 888998765 222223333221 1222211 11222 122
Q ss_pred hCCCCEEEEcCCCCCC-C-CC-C---HHhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 112 LTGMDIVIIPAGVPRK-P-GM-T---RDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~-~-g~-~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
+...|++|+++|.... + .. + -...+..|... .+.+.+.+.+ ...+.|++++......
T Consensus 85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~isS~~~~~------------ 151 (265)
T PRK07097 85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINICSMMSEL------------ 151 (265)
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCcEEEEEcCccccC------------
Confidence 2447999999986321 1 11 1 12223445443 3344444443 3356777776654221
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+.+....++.+...-..+.+.+++.++ +..|++..+
T Consensus 152 ~~~~~~~Y~~sKaal~~l~~~la~e~~--~~gi~v~~v 187 (265)
T PRK07097 152 GRETVSAYAAAKGGLKMLTKNIASEYG--EANIQCNGI 187 (265)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhh--hcCceEEEE
Confidence 233334556654444456677777764 344554443
No 260
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.83 E-value=0.015 Score=52.79 Aligned_cols=115 Identities=20% Similarity=0.237 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh----
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTNAVVRGFLG-QQQ---LEDAL---- 112 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al---- 112 (358)
+++++|.|+||+|.+|+.++..|+++|. ++++...... .....++... ...+..+.. -.| ..+++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~ 79 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGA--DVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAV 79 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHH
Confidence 3456999999999999999999999887 6666554331 1112222211 122222211 112 22222
Q ss_pred ---CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHHH----HhhCCCeEEEEec
Q 018265 113 ---TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGI----AKCCPKAIVNLIS 163 (358)
Q Consensus 113 ---~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~t 163 (358)
.+.|+||+++|..... +.+. .+.+..|+.....+.+.+ ++.. ...+++++
T Consensus 80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~S 142 (249)
T PRK12825 80 ERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNIS 142 (249)
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEC
Confidence 4679999999854221 1122 233555666555555555 4433 23455544
No 261
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.83 E-value=0.019 Score=53.02 Aligned_cols=156 Identities=17% Similarity=0.131 Sum_probs=82.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFL-GQQQ---LEDALT------ 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------ 113 (358)
+..+|.|+||+|.+|..++..|+..|. .+++++.+. .......+.... ..+..+. .-+| .++.++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA--DIIITTHGTNWDETRRLIEKEG--RKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 345899999999999999999999887 888998764 122222222211 1222111 1122 222333
Q ss_pred -CCCEEEEcCCCCCC-C--CCC---HHhHHHHHHHHHHHHH----HHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCC
Q 018265 114 -GMDIVIIPAGVPRK-P--GMT---RDDLFNINAGIVKTLC----EGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (358)
Q Consensus 114 -~aDiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~ 182 (358)
..|++|+++|.... + ..+ -...+..|+.....+. +.+.+. ..+.+++++...... +
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------~ 156 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIASMLSFQ------------G 156 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-CCeEEEEECCHHhcc------------C
Confidence 67999999986431 1 111 2233455655544444 444332 245666665543211 1
Q ss_pred CCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 183 ~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
.+..-.++.+......+.+.+++.++ +..|++.++
T Consensus 157 ~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~i 191 (258)
T PRK06935 157 GKFVPAYTASKHGVAGLTKAFANELA--AYNIQVNAI 191 (258)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence 12222344444444456677777764 345544333
No 262
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.83 E-value=0.034 Score=51.93 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
.+..++.|+||+|.+|++++..|+..|. .|+++|++.
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~--~V~~~~r~~ 44 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGA--KVAILDRNQ 44 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 3456899999999999999999999887 899999865
No 263
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=96.82 E-value=0.0095 Score=55.90 Aligned_cols=102 Identities=25% Similarity=0.295 Sum_probs=64.0
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC-CCCEEEEcCCCCCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT-GMDIVIIPAGVPRK 127 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~-~aDiVIi~ag~~~~ 127 (358)
|+|+|++|+||+++...|...|. +|..+-++....... .+ ..+... +.+.+... ++|+||..||.|-.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh--~v~iltR~~~~~~~~--~~----~~v~~~---~~~~~~~~~~~DavINLAG~~I~ 69 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH--QVTILTRRPPKASQN--LH----PNVTLW---EGLADALTLGIDAVINLAGEPIA 69 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC--eEEEEEcCCcchhhh--cC----cccccc---chhhhcccCCCCEEEECCCCccc
Confidence 68999999999999999999887 888887665221111 11 111111 11223333 79999999997632
Q ss_pred CC----CCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEE
Q 018265 128 PG----MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNL 161 (358)
Q Consensus 128 ~g----~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv 161 (358)
.. +....+..--+...+.+.+.|.+......+++
T Consensus 70 ~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~i 107 (297)
T COG1090 70 ERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLI 107 (297)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEE
Confidence 21 12233445557788888899987664443333
No 264
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.82 E-value=0.019 Score=52.53 Aligned_cols=153 Identities=12% Similarity=0.051 Sum_probs=80.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEe----CCCcHHhhhC-------C-
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFL----GQQQLEDALT-------G- 114 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~----~t~d~~~al~-------~- 114 (358)
++|.|+||+|.+|++++..|+..|. ++++.+.+.. ....++.+... ..+..+. ...+++++++ .
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~--~vv~~~~~~~-~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGA--RVVVNYHQSE-DAAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC--eEEEEcCCCH-HHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4899999999999999999998887 7777654331 11111111000 1111111 1112333332 2
Q ss_pred CCEEEEcCCCCC-------CC--CCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHH
Q 018265 115 MDIVIIPAGVPR-------KP--GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKK 179 (358)
Q Consensus 115 aDiVIi~ag~~~-------~~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~ 179 (358)
.|++|+.+|... .+ ..+. ...+..|+.....+.+.+..+ ...+.+++++......
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------- 151 (253)
T PRK08642 82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN---------- 151 (253)
T ss_pred CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC----------
Confidence 899999987521 11 1111 223455655444444444321 2246677766543211
Q ss_pred hCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceE
Q 018265 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVP 217 (358)
Q Consensus 180 ~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~ 217 (358)
..++...++.+......+-+.+|+.++ +..+++.
T Consensus 152 --~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~i~v~ 185 (253)
T PRK08642 152 --PVVPYHDYTTAKAALLGLTRNLAAELG--PYGITVN 185 (253)
T ss_pred --CCCCccchHHHHHHHHHHHHHHHHHhC--ccCeEEE
Confidence 122234577766666677788888775 3445443
No 265
>PRK07574 formate dehydrogenase; Provisional
Probab=96.81 E-value=0.013 Score=58.09 Aligned_cols=113 Identities=17% Similarity=0.228 Sum_probs=68.3
Q ss_pred cccccccCC-CCCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHh
Q 018265 32 GLGRMDCRA-KGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLED 110 (358)
Q Consensus 32 ~~~~~~~~~-~~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~ 110 (358)
.|.+..|.. ......++|+|+|. |.||+.++..|..-|. +|+.+|+........ ... .+.. ..++++
T Consensus 177 ~W~~~~~~~~~~~L~gktVGIvG~-G~IG~~vA~~l~~fG~--~V~~~dr~~~~~~~~--~~~----g~~~---~~~l~e 244 (385)
T PRK07574 177 GWNIADCVSRSYDLEGMTVGIVGA-GRIGLAVLRRLKPFDV--KLHYTDRHRLPEEVE--QEL----GLTY---HVSFDS 244 (385)
T ss_pred CCCcccccccceecCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCCchhhH--hhc----Ccee---cCCHHH
Confidence 465544322 23455679999998 9999999999987776 999999764211111 000 1111 135789
Q ss_pred hhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec--CCCCcc
Q 018265 111 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS--NPVNST 169 (358)
Q Consensus 111 al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NP~d~~ 169 (358)
.++.||+|++..... ..+-.++. .+.+....|.+++||++ ..+|.-
T Consensus 245 ll~~aDvV~l~lPlt-----------~~T~~li~--~~~l~~mk~ga~lIN~aRG~iVDe~ 292 (385)
T PRK07574 245 LVSVCDVVTIHCPLH-----------PETEHLFD--ADVLSRMKRGSYLVNTARGKIVDRD 292 (385)
T ss_pred HhhcCCEEEEcCCCC-----------HHHHHHhC--HHHHhcCCCCcEEEECCCCchhhHH
Confidence 999999999985321 11222221 13333334788999985 445443
No 266
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.81 E-value=0.037 Score=51.01 Aligned_cols=157 Identities=15% Similarity=0.172 Sum_probs=84.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------CC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFL-GQQQ---LEDAL-------TG 114 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~ 114 (358)
...+.|+|++|.+|.+++..|+..|. +|+++|.........++.... ..+..+. .-+| .++++ ..
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGC--DIVGINIVEPTETIEQVTALG--RRFLSLTADLRKIDGIPALLERAVAEFGH 85 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEecCcchHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 45899999999999999999999887 888888754322223333211 1222111 1122 22222 36
Q ss_pred CCEEEEcCCCCCCC---CCC---HHhHHHHHHHHHH----HHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCC
Q 018265 115 MDIVIIPAGVPRKP---GMT---RDDLFNINAGIVK----TLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 115 aDiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p 184 (358)
.|++|+++|..... ..+ -...+..|+.... .+.+.+.+..+.+.+++++.-.... +.+
T Consensus 86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~ 153 (253)
T PRK08993 86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ------------GGI 153 (253)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc------------CCC
Confidence 89999999874311 111 2233455655444 4444444434457777765432111 122
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
..-.++.+......+.+.+|..+. +..|++..+-
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v~ 187 (253)
T PRK08993 154 RVPSYTASKSGVMGVTRLMANEWA--KHNINVNAIA 187 (253)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhh--hhCeEEEEEe
Confidence 223455554333445667777653 4455544443
No 267
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.034 Score=51.22 Aligned_cols=116 Identities=15% Similarity=0.118 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHHhcCCCCCeEEEEeC-CCc---HHhhhC-----
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLG-QQQ---LEDALT----- 113 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al~----- 113 (358)
++..+|.|+||+|.+|..++..|+..|. ++++.+.+.. .....++.... ..+..+.. -+| ++.+++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGA--IPVIFGRSAPDDEFAEELRALQ--PRAEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCC--cEEEEcCChhhHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 3446899999999999999999999887 7888887662 22223333211 12222111 122 223332
Q ss_pred --CCCEEEEcCCCCCCCCC-----CHHhHHHHHHHHHHHHHHHHHhhC--CCeEEEEec
Q 018265 114 --GMDIVIIPAGVPRKPGM-----TRDDLFNINAGIVKTLCEGIAKCC--PKAIVNLIS 163 (358)
Q Consensus 114 --~aDiVIi~ag~~~~~g~-----~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t 163 (358)
..|+||+++|....... +-...+..|+.....+.+....+. ..+.+++++
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (258)
T PRK08628 81 FGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS 139 (258)
T ss_pred cCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence 57999999986432211 122345566655555555444321 234455544
No 268
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.80 E-value=0.054 Score=50.05 Aligned_cols=157 Identities=15% Similarity=0.135 Sum_probs=96.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCC-------CcHHhhhCCCCE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQ-------QQLEDALTGMDI 117 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t-------~d~~~al~~aDi 117 (358)
+=+.|+||++.+|.++|..|...|. .++|..++. ++..+.++.+....+..-.+... ....+.+...|+
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~--~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA--KVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCC--eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 3578999999999999999999998 999999876 55566666641111111011000 123345678999
Q ss_pred EEEcCCCCCCCC------CCHHhHHHHHHHHHHHHHHHH----HhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 118 VIIPAGVPRKPG------MTRDDLFNINAGIVKTLCEGI----AKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 118 VIi~ag~~~~~g------~~r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
+|..||..+... .+-..++..|++-+......+ .+. ..+.|||++.=.... .||...
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiAG~~------------~y~~~~ 151 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIAGRY------------PYPGGA 151 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEeccccccc------------cCCCCc
Confidence 999999764311 123446677877666555544 433 356888876554332 267778
Q ss_pred EEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 188 LLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 188 viG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+||-|.-....|...|-..+ ..+.|++..|-
T Consensus 152 vY~ATK~aV~~fs~~LR~e~--~g~~IRVt~I~ 182 (246)
T COG4221 152 VYGATKAAVRAFSLGLRQEL--AGTGIRVTVIS 182 (246)
T ss_pred cchhhHHHHHHHHHHHHHHh--cCCCeeEEEec
Confidence 88887544433433333332 24666665553
No 269
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.06 Score=49.15 Aligned_cols=115 Identities=21% Similarity=0.224 Sum_probs=63.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCcHH----------hhhC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQLE----------DALT 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d~~----------~al~ 113 (358)
.++.|+||+|.+|.+++..|+..+. .+++.+++. ......++........+.... .-+|.+ +.+.
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR--DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998886 899999875 222222332211111222211 112221 2234
Q ss_pred CCCEEEEcCCCCCCCCC---C---HHhHHHHHHHHHHHHHHHH----HhhCCCeEEEEecC
Q 018265 114 GMDIVIIPAGVPRKPGM---T---RDDLFNINAGIVKTLCEGI----AKCCPKAIVNLISN 164 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g~---~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN 164 (358)
..|+||+.+|....... + -...+..|......+.+.+ ++.. ...+++++.
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS 140 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISS 140 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEec
Confidence 68999999986432211 1 1223455655444444443 3333 334555543
No 270
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.033 Score=51.58 Aligned_cols=116 Identities=22% Similarity=0.233 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCcHH---hh------h
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQLE---DA------L 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d~~---~a------l 112 (358)
+..+|.|+||+|.+|..++..|+..|. +|++++++. ......++... ..+..+.. -+|.+ +. +
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~ 78 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA--RLLLVGRNAEKLEALAARLPYP---GRHRWVVADLTSEAGREAVLARAREM 78 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHHHHhc
Confidence 345899999999999999999999887 899999875 11122223111 12222111 12221 11 3
Q ss_pred CCCCEEEEcCCCCCCCC---CC---HHhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCC
Q 018265 113 TGMDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNP 165 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 165 (358)
...|+||+++|...... .+ -...+..|+.....+.+.+..+ .+.+.+++++..
T Consensus 79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~ 140 (263)
T PRK09072 79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGST 140 (263)
T ss_pred CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecCh
Confidence 46799999998643211 11 1234456665555555555432 223556666553
No 271
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.79 E-value=0.013 Score=51.79 Aligned_cols=97 Identities=27% Similarity=0.348 Sum_probs=60.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
......+|+|+|. |.||+.++..+..-|. +|+.+|....... ...+.. +. ..++++.++.||+|++.
T Consensus 32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~--~~~~~~----~~----~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 32 RELRGKTVGIIGY-GRIGRAVARRLKAFGM--RVIGYDRSPKPEE--GADEFG----VE----YVSLDELLAQADIVSLH 98 (178)
T ss_dssp S-STTSEEEEEST-SHHHHHHHHHHHHTT---EEEEEESSCHHHH--HHHHTT----EE----ESSHHHHHHH-SEEEE-
T ss_pred cccCCCEEEEEEE-cCCcCeEeeeeecCCc--eeEEecccCChhh--hccccc----ce----eeehhhhcchhhhhhhh
Confidence 3445569999998 9999999999997777 9999998763222 111111 11 13678999999999997
Q ss_pred CC-CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 018265 122 AG-VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165 (358)
Q Consensus 122 ag-~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 165 (358)
.- .+...++- |. +.+.+..|++++||++--
T Consensus 99 ~plt~~T~~li-------~~-------~~l~~mk~ga~lvN~aRG 129 (178)
T PF02826_consen 99 LPLTPETRGLI-------NA-------EFLAKMKPGAVLVNVARG 129 (178)
T ss_dssp SSSSTTTTTSB-------SH-------HHHHTSTTTEEEEESSSG
T ss_pred hccccccceee-------ee-------eeeeccccceEEEeccch
Confidence 53 22222221 11 122334478899998643
No 272
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.78 E-value=0.022 Score=55.04 Aligned_cols=158 Identities=15% Similarity=0.147 Sum_probs=83.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEE--eCCCc-------HHhhhC-
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGF--LGQQQ-------LEDALT- 113 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~--~~t~d-------~~~al~- 113 (358)
...+.|+||+|.+|.+++..|+..|. +|++++++. .+....++........+..+ .-+.| ..+.+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGL--NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 35899999999999999999999987 899999876 23333444322111122211 11112 122233
Q ss_pred -CCCEEEEcCCCCCC---C--CCCH---HhHHHHHHHHHHHHHHH----HHhhCCCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 114 -GMDIVIIPAGVPRK---P--GMTR---DDLFNINAGIVKTLCEG----IAKCCPKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 114 -~aDiVIi~ag~~~~---~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
|.|++|+.||.... + ..+. ...+..|+.....+.+. +.+. ..+.+++++.-.... .
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~----------~ 199 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGSGAAIV----------I 199 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEechhhcc----------C
Confidence 45589999986421 1 1121 23455565544444444 4433 345666665432211 0
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEE
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPV 218 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v 218 (358)
++.|..-.++.+......+-..++..++ +..|++.+
T Consensus 200 ~~~p~~~~Y~aSKaal~~~~~~L~~El~--~~gI~V~~ 235 (320)
T PLN02780 200 PSDPLYAVYAATKAYIDQFSRCLYVEYK--KSGIDVQC 235 (320)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHh--ccCeEEEE
Confidence 1122223444444334456666666663 34454443
No 273
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.78 E-value=0.098 Score=48.33 Aligned_cols=158 Identities=14% Similarity=0.127 Sum_probs=84.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHHhcCCCCCeEEEEe-CCCcHH---hh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTNAVVRGFL-GQQQLE---DA------ 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---~g~~~dl~~~~~~~~v~~~~-~t~d~~---~a------ 111 (358)
+..++.|+||+|.+|..++..|+..|. .+++...+.. .....++.... ..+..+. .-+|.+ +.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~--~vvi~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA--KVVINYRSDEEEANDVAEEIKKAG--GEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHH
Confidence 445899999999999999999999886 7777766431 22222333221 1222111 112221 11
Q ss_pred -hCCCCEEEEcCCCCCCC---CCCHH---hHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 112 -LTGMDIVIIPAGVPRKP---GMTRD---DLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 112 -l~~aDiVIi~ag~~~~~---g~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
+...|++|+.+|..... ..+.. ..+..|+. +.+.+.+.+.+....+.+++++.-...
T Consensus 82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------------ 149 (261)
T PRK08936 82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------------ 149 (261)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------------
Confidence 23579999999864321 11121 23455543 334555566655445666666542111
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
...|..-.++.+......+...++..+. +..|++.++.
T Consensus 150 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v~ 187 (261)
T PRK08936 150 IPWPLFVHYAASKGGVKLMTETLAMEYA--PKGIRVNNIG 187 (261)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeEEEEEE
Confidence 1234444566654333445666666663 3456555554
No 274
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.059 Score=49.68 Aligned_cols=157 Identities=15% Similarity=0.147 Sum_probs=83.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--c----hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh---
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T----PGVTADISHMDTNAVVRGFL-GQQQ---LEDA--- 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~----~g~~~dl~~~~~~~~v~~~~-~t~d---~~~a--- 111 (358)
+.+++.|+||+|.+|.+++..|+..|. ++++++.+. . .....++.... ..+..+. .-+| .+++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~--~vv~i~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA--KAVAIHYNSAASKADAEETVAAVKAAG--AKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC--cEEEEecCCccchHHHHHHHHHHHHhC--CcEEEEecCcCCHHHHHHHHHH
Confidence 345899999999999999999998887 666665432 1 11122232211 1222211 1122 2222
Q ss_pred ----hCCCCEEEEcCCCCCCC---CCC---HHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEe-cCCCCccHHHHHHHHHH
Q 018265 112 ----LTGMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI-SNPVNSTVPIAAEVFKK 179 (358)
Q Consensus 112 ----l~~aDiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNP~d~~t~~~~~~~~~ 179 (358)
+...|++|+.+|..... ..+ -...+..|+.....+++.+...- +.+.++++ +.-....
T Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~---------- 152 (257)
T PRK12744 83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF---------- 152 (257)
T ss_pred HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc----------
Confidence 23679999999864211 112 22334556555444555544332 33444443 3322111
Q ss_pred hCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 180 ~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
.|....++.+......+-+.+++.++ +..|++.++.
T Consensus 153 ---~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~ 188 (257)
T PRK12744 153 ---TPFYSAYAGSKAPVEHFTRAASKEFG--ARGISVTAVG 188 (257)
T ss_pred ---CCCcccchhhHHHHHHHHHHHHHHhC--cCceEEEEEe
Confidence 12234567766556678888888876 3445544443
No 275
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=96.78 E-value=0.0077 Score=61.35 Aligned_cols=100 Identities=17% Similarity=0.193 Sum_probs=63.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCC--CCeEEEEeCCCcHHhhhC---CCCEEEEc
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--NAVVRGFLGQQQLEDALT---GMDIVIIP 121 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~--~~~v~~~~~t~d~~~al~---~aDiVIi~ 121 (358)
.+|+|||. |.+|+++|..|+..|. +|.++|++... +.++..... ...+.. +.+++++++ ++|+||++
T Consensus 2 ~~IgvIGL-G~MG~~lA~nL~~~G~--~V~v~dr~~~~--~~~l~~~~~~~g~~i~~---~~s~~e~v~~l~~~d~Iil~ 73 (470)
T PTZ00142 2 SDIGLIGL-AVMGQNLALNIASRGF--KISVYNRTYEK--TEEFVKKAKEGNTRVKG---YHTLEELVNSLKKPRKVILL 73 (470)
T ss_pred CEEEEEeE-hHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHhhhhcCCccee---cCCHHHHHhcCCCCCEEEEE
Confidence 48999998 9999999999999998 99999987522 222222100 111222 346777765 58988887
Q ss_pred CCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCcc
Q 018265 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNST 169 (358)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~ 169 (358)
.-. ...++++++.+..+ .|+.+||..+|-...-
T Consensus 74 v~~---------------~~~v~~vi~~l~~~L~~g~iIID~gn~~~~d 107 (470)
T PTZ00142 74 IKA---------------GEAVDETIDNLLPLLEKGDIIIDGGNEWYLN 107 (470)
T ss_pred eCC---------------hHHHHHHHHHHHhhCCCCCEEEECCCCCHHH
Confidence 321 23344444444443 3677888887654333
No 276
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.1 Score=48.59 Aligned_cols=154 Identities=16% Similarity=0.166 Sum_probs=84.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe----CCCcHHhhh------C
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL----GQQQLEDAL------T 113 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~----~t~d~~~al------~ 113 (358)
...+.|+||+|.+|.+++..|+..|. +|+++|++. ......++.... ...+..+. ...+.++++ .
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~g 84 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGA--DVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKNIG 84 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence 34789999999999999999999987 899999875 222223333211 11222111 111222333 3
Q ss_pred CCCEEEEcCCCCCCC---CCCHH---hHHHHH----HHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 114 GMDIVIIPAGVPRKP---GMTRD---DLFNIN----AGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~---g~~r~---~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
..|++|+.+|.+... ..+.. ..+..| ....+.+.+.+++.. .+.||++|...... +.
T Consensus 85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~------------~~ 151 (263)
T PRK08339 85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKE------------PI 151 (263)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccC------------CC
Confidence 579999999865321 11221 223334 445667777776543 46677766543211 12
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceE
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVP 217 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~ 217 (358)
|..-.++.+.-.-..+-+.+|..++ +..|++.
T Consensus 152 ~~~~~y~asKaal~~l~~~la~el~--~~gIrVn 183 (263)
T PRK08339 152 PNIALSNVVRISMAGLVRTLAKELG--PKGITVN 183 (263)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhc--ccCeEEE
Confidence 2222233333333456677777774 4455443
No 277
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.056 Score=49.62 Aligned_cols=157 Identities=18% Similarity=0.165 Sum_probs=82.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEe-CCCcH----------Hh
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFL-GQQQL----------ED 110 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~t~d~----------~~ 110 (358)
+.+.+.|+||+|.+|++++..|+..|. .+++.+.+. ......++..... .+..+. .-+|. .+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 78 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSNGG--SAFSIGANLESLHGVEALYSSLDN 78 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHHhcCC--ceEEEecccCCHHHHHHHHHHHHH
Confidence 345899999999999999999999887 788775432 2222233332111 111100 00111 11
Q ss_pred hh------CCCCEEEEcCCCCCC-C--CCCH---HhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHH
Q 018265 111 AL------TGMDIVIIPAGVPRK-P--GMTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVF 177 (358)
Q Consensus 111 al------~~aDiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~ 177 (358)
.+ ...|++|+.+|.... + ..+. ...+..|+.-...+++.+...- ..+.||++|.-....
T Consensus 79 ~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-------- 150 (252)
T PRK12747 79 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI-------- 150 (252)
T ss_pred HhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc--------
Confidence 11 268999999986321 1 1111 2234556554444444433321 346677766543221
Q ss_pred HHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 178 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 178 ~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+.|..-.|+.+......+.+.+|..++ +..|++.++
T Consensus 151 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~girvn~v 186 (252)
T PRK12747 151 ----SLPDFIAYSMTKGAINTMTFTLAKQLG--ARGITVNAI 186 (252)
T ss_pred ----CCCCchhHHHHHHHHHHHHHHHHHHHh--HcCCEEEEE
Confidence 223333456655555567777777764 344544444
No 278
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.044 Score=50.40 Aligned_cols=157 Identities=16% Similarity=0.157 Sum_probs=87.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQ---LEDAL------- 112 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 112 (358)
..++.|+||+|.+|..++..|+..|. ++++.+++. ......++.+.. ..+..+. .-+| .++++
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGA--KVVVGARRQAELDQLVAEIRAEG--GEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 35899999999999999999999887 899999865 222233343321 1222111 1112 22222
Q ss_pred CCCCEEEEcCCCCC--CC--CCCH---HhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 113 TGMDIVIIPAGVPR--KP--GMTR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 113 ~~aDiVIi~ag~~~--~~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
...|++|+.+|... .+ ..+. ...+..|+. ..+.+.+.+.+. ..+.+++++...... .
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~~-----------~ 149 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGHT-----------A 149 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhhc-----------c
Confidence 36799999998632 12 1222 233556654 445555555543 345566655432110 1
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.+..-.++.+......+-..+++.++ +..|++.++-
T Consensus 150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~ 186 (254)
T PRK07478 150 GFPGMAAYAASKAGLIGLTQVLAAEYG--AQGIRVNALL 186 (254)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHh--hcCEEEEEEe
Confidence 233344566665555566777777764 3445554443
No 279
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.098 Score=48.36 Aligned_cols=161 Identities=13% Similarity=0.098 Sum_probs=82.8
Q ss_pred CCCCEEEEEcCCC-chHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh----
Q 018265 44 SPGFKVAVLGAAG-GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---LEDAL---- 112 (358)
Q Consensus 44 ~~~~KI~IiGa~G-~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al---- 112 (358)
++..++.|+||+| .+|+.++..|+..|. .|++.|.+. ......++........+..+.. -++ .++++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGA--RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 3446899999977 599999999999887 789998765 2222223332111112222211 112 22222
Q ss_pred ---CCCCEEEEcCCCCCCC---CCC---HHhHHHHHHHHH----HHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHH
Q 018265 113 ---TGMDIVIIPAGVPRKP---GMT---RDDLFNINAGIV----KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKK 179 (358)
Q Consensus 113 ---~~aDiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~ 179 (358)
...|++|+.+|..... ..+ -.+.+..|+... +.+.+.+.+....+.+++++.-....
T Consensus 93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~---------- 162 (262)
T PRK07831 93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR---------- 162 (262)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC----------
Confidence 3679999999864211 111 122234444433 34444444333245566554322111
Q ss_pred hCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 180 ~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
..+..-.++.+...-..+.+.+|..+. +..|++..+-
T Consensus 163 --~~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~v~~i~ 199 (262)
T PRK07831 163 --AQHGQAHYAAAKAGVMALTRCSALEAA--EYGVRINAVA 199 (262)
T ss_pred --CCCCCcchHHHHHHHHHHHHHHHHHhC--ccCeEEEEEe
Confidence 122333456554444456677776653 4455554443
No 280
>PRK08264 short chain dehydrogenase; Validated
Probab=96.77 E-value=0.017 Score=52.53 Aligned_cols=143 Identities=13% Similarity=0.040 Sum_probs=78.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEE----eCCCcHHhhhC---CCCE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGF----LGQQQLEDALT---GMDI 117 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~----~~t~d~~~al~---~aDi 117 (358)
+..+|.|+||+|.+|++++..|+..|. ..|++++++..... + . ...+..+ ....+++++++ ..|+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~-~~V~~~~r~~~~~~--~-~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 76 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGA-AKVYAAARDPESVT--D-L----GPRVVPLQLDVTDPASVAAAAEAASDVTI 76 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCc-ccEEEEecChhhhh--h-c----CCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 345899999999999999999998874 36888887652111 1 1 0111111 11122333333 5799
Q ss_pred EEEcCCCCCCC----CCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 118 VIIPAGVPRKP----GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 118 VIi~ag~~~~~----g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
||+.+|..... ..+. ...+..|......+.+.+... ...+.+++++...... +.+...
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~------------~~~~~~ 144 (238)
T PRK08264 77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV------------NFPNLG 144 (238)
T ss_pred EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc------------CCCCch
Confidence 99999873211 1111 223445655555555554322 2345666666544221 233334
Q ss_pred EEEeeeccHHHHHHHHHHHh
Q 018265 188 LLGVTMLDVVRANTFVAEVL 207 (358)
Q Consensus 188 viG~t~lds~R~~~~lA~~l 207 (358)
.+|.+......+...+++.+
T Consensus 145 ~y~~sK~a~~~~~~~l~~~~ 164 (238)
T PRK08264 145 TYSASKAAAWSLTQALRAEL 164 (238)
T ss_pred HhHHHHHHHHHHHHHHHHHh
Confidence 45565544455666666665
No 281
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.013 Score=52.54 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=46.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCe-EEE-EeCCCcHHhhhC---CCCEEEE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAV-VRG-FLGQQQLEDALT---GMDIVII 120 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~-v~~-~~~t~d~~~al~---~aDiVIi 120 (358)
+++|.|+||+|++|+.++..|++. . ++++++++... ..++.+...... +.. .....+++++++ +.|+||+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H--TLLLGGRPAER--LDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C--CEEEEeCCHHH--HHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 458999999999999999999887 4 89999976421 112211100011 111 111123444454 5999999
Q ss_pred cCCCC
Q 018265 121 PAGVP 125 (358)
Q Consensus 121 ~ag~~ 125 (358)
++|..
T Consensus 78 ~ag~~ 82 (227)
T PRK08219 78 NAGVA 82 (227)
T ss_pred CCCcC
Confidence 98864
No 282
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.042 Score=53.35 Aligned_cols=115 Identities=13% Similarity=0.093 Sum_probs=65.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQ---LEDA------- 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~a------- 111 (358)
+..+|+|+||+|.+|..++..|+..|. +|++++++. ......++.... ..+..+. .-+| .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~--~Vvl~~R~~~~l~~~~~~l~~~g--~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA--KVVLLARGEEGLEALAAEIRAAG--GEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999887 899999865 222233343221 1221111 1122 2222
Q ss_pred hCCCCEEEEcCCCCCCC---CCCH---HhHHHHH----HHHHHHHHHHHHhhCCCeEEEEecC
Q 018265 112 LTGMDIVIIPAGVPRKP---GMTR---DDLFNIN----AGIVKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN 164 (358)
+...|++|+.+|..... ..+. ...+..| +...+.+.+.+.+. ..+.+|+++.
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS 144 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGS 144 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCC
Confidence 23689999998864211 1111 1223333 44555666666543 2356666654
No 283
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.76 E-value=0.0096 Score=50.59 Aligned_cols=118 Identities=17% Similarity=0.197 Sum_probs=70.5
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHH-----HhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD-----ISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~d-----l~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
|+|+|+ |.+|..+|..|.+.+. ++.|++... ...... +.+......+.......+..+....+|+||++.-
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~--~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGH--DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTC--EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SS
T ss_pred CEEECc-CHHHHHHHHHHHHCCC--ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEec
Confidence 789998 9999999999999887 999999754 212111 1111101112221111222245799999999853
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe-ee
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TM 193 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~-t~ 193 (358)
.. -..+.++.++.+. |++.|+..-|=++..- .+.+. +|+.++++- +.
T Consensus 77 a~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~-----~l~~~--~~~~~v~~g~~~ 125 (151)
T PF02558_consen 77 AY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEE-----VLAEY--FPRPRVLGGVTT 125 (151)
T ss_dssp GG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHH-----HHHCH--STGSGEEEEEEE
T ss_pred cc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHH-----HHHHH--cCCCcEEEEEEe
Confidence 11 1233555566665 6778888888887663 23333 566677654 54
No 284
>PRK12742 oxidoreductase; Provisional
Probab=96.76 E-value=0.018 Score=52.13 Aligned_cols=157 Identities=18% Similarity=0.182 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcH---Hhh---hCCCCEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQL---EDA---LTGMDIV 118 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~---~~a---l~~aDiV 118 (358)
+.++|.|+||+|.||+.++..|+..|. ++++.+.+... ...++.... ....... ..+|. .+. +...|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~-~~~~~~~-D~~~~~~~~~~~~~~~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA--NVRFTYAGSKD-AAERLAQET-GATAVQT-DSADRDAVIDVVRKSGALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCCHH-HHHHHHHHh-CCeEEec-CCCCHHHHHHHHHHhCCCcEE
Confidence 345899999999999999999999887 77777653311 111121100 0111111 11222 222 2457999
Q ss_pred EEcCCCCCCC---CCC---HHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe
Q 018265 119 IIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (358)
Q Consensus 119 Ii~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~ 191 (358)
|+++|..... ..+ -...+..|+.-...++..+..+ .+.+.+++++.-.... ...+....++.
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~~Y~~ 148 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-----------MPVAGMAAYAA 148 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-----------CCCCCCcchHH
Confidence 9999864321 111 1223455554444443333322 2345666655432111 01334456777
Q ss_pred eeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 192 TMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 192 t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+......+...++..++ +..+++.++
T Consensus 149 sKaa~~~~~~~la~~~~--~~gi~v~~v 174 (237)
T PRK12742 149 SKSALQGMARGLARDFG--PRGITINVV 174 (237)
T ss_pred hHHHHHHHHHHHHHHHh--hhCeEEEEE
Confidence 65555567777777764 334544443
No 285
>PRK09242 tropinone reductase; Provisional
Probab=96.76 E-value=0.052 Score=50.02 Aligned_cols=158 Identities=16% Similarity=0.140 Sum_probs=83.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---H-------Hhhh
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---L-------EDAL 112 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~-------~~al 112 (358)
.+++.|+||+|.+|+.++..|+..|. +|++++++. ......++.......++..+.. -+| . .+.+
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGA--DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999887 899999865 2222333432211112222111 011 1 1224
Q ss_pred CCCCEEEEcCCCCCC-C--CCCH---HhHHHHHHHHHHHH----HHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCC
Q 018265 113 TGMDIVIIPAGVPRK-P--GMTR---DDLFNINAGIVKTL----CEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~ 182 (358)
...|+||+++|.... + ..+. ...+..|+.-...+ .+.+++. +.+.+++++.-.... +
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~------------~ 153 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGSVSGLT------------H 153 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECccccCC------------C
Confidence 567999999986321 1 1111 22344555544444 4444433 345666665433221 2
Q ss_pred CCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 183 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 183 ~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
.+..-.++.+......+...+|..+. +..+++..+.
T Consensus 154 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~i~ 189 (257)
T PRK09242 154 VRSGAPYGMTKAALLQMTRNLAVEWA--EDGIRVNAVA 189 (257)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHH--HhCeEEEEEE
Confidence 22233455554444456666666652 3445544443
No 286
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.75 E-value=0.029 Score=51.74 Aligned_cols=158 Identities=15% Similarity=0.117 Sum_probs=83.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCcH---Hhh-------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQL---EDA------- 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d~---~~a------- 111 (358)
+.++|.|+||+|.+|++++..|...|. +++++|.+. ......++.+.. ..+..+. .-+|. +++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~--~vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 346999999999999999999999887 889998765 222223333221 1111111 11122 122
Q ss_pred hCCCCEEEEcCCCCCC--CCCCHHh---HHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 112 LTGMDIVIIPAGVPRK--PGMTRDD---LFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~--~g~~r~~---~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
+...|++|+++|.... ...+..+ .+..|+.-...+.+.+..+ ...+.+++++.-.... +.
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~~ 153 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN------------KN 153 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC------------CC
Confidence 2457999999885321 1222222 2556666555555555422 2234556655433211 22
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+..-.++.+......+.+.++..+ .+..|++.++.
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~la~~~--~~~~i~v~~v~ 188 (255)
T PRK06113 154 INMTSYASSKAAASHLVRNMAFDL--GEKNIRVNGIA 188 (255)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHh--hhhCeEEEEEe
Confidence 222335554333334555666655 34556555444
No 287
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.75 E-value=0.0081 Score=57.51 Aligned_cols=64 Identities=16% Similarity=0.297 Sum_probs=44.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC---CCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTG---MDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~---aDiVIi~a 122 (358)
|||+|||. |.+|+.++..|...+. +|+.+|++... ...+.+.. ... ..++++.+++ +|+||++.
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~s~~~~~~~~~~advVi~~v 67 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGH--EVVGYDVNQEA--VDVAGKLG----ITA---RHSLEELVSKLEAPRTIWVMV 67 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHHhCCCCCEEEEEe
Confidence 58999998 9999999999998887 89999987522 12222211 111 2356666665 68998874
No 288
>PRK05855 short chain dehydrogenase; Validated
Probab=96.74 E-value=0.028 Score=57.85 Aligned_cols=160 Identities=16% Similarity=0.143 Sum_probs=87.7
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCcH---Hhhh---
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQL---EDAL--- 112 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d~---~~al--- 112 (358)
...+.+++.|+||+|.+|.+++..|+..|. +|++++++. ......++.... ..+..+.. -+|. ++.+
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~ 386 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGA--EVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDADAMEAFAEWV 386 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHH
Confidence 445567999999999999999999999888 899999876 222223333211 11221111 1222 1222
Q ss_pred ----CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHH
Q 018265 113 ----TGMDIVIIPAGVPRKP---GMTR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFK 178 (358)
Q Consensus 113 ----~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~ 178 (358)
...|++|+.||..... ..+. ...+..|+. ..+.+.+.+.+....+.|+++|.-....
T Consensus 387 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------- 457 (582)
T PRK05855 387 RAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA--------- 457 (582)
T ss_pred HHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc---------
Confidence 3479999999875321 1121 223445643 4445555565555556777766543221
Q ss_pred HhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 179 KVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 179 ~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+.+..-.++.+......+...++..+. ...|++.++
T Consensus 458 ---~~~~~~~Y~~sKaa~~~~~~~l~~e~~--~~gi~v~~v 493 (582)
T PRK05855 458 ---PSRSLPAYATSKAAVLMLSECLRAELA--AAGIGVTAI 493 (582)
T ss_pred ---CCCCCcHHHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence 223233444443333445566666553 345655444
No 289
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.022 Score=52.34 Aligned_cols=157 Identities=14% Similarity=0.117 Sum_probs=81.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQ---LEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al------ 112 (358)
+..+|.|+||+|.+|.+++..|...|. .|+++|++. ......++.+.. ..+..+. .-+| .++++
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA--HVIVSSRKLDGCQAVADAIVAAG--GKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999887 899999865 222233333221 1111110 1112 22222
Q ss_pred -CCCCEEEEcCCCCC--CC--CCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 113 -TGMDIVIIPAGVPR--KP--GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 113 -~~aDiVIi~ag~~~--~~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
...|++|+.+|... .+ ..+. ...+..|......+.+.+.++ ...+.+++++......
T Consensus 83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------ 150 (252)
T PRK07035 83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS------------ 150 (252)
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC------------
Confidence 35799999987421 11 1221 223455655544444444322 2235666655432111
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
..+..-.++.+......+.+.+++.++ +..|++..+
T Consensus 151 ~~~~~~~Y~~sK~al~~~~~~l~~e~~--~~gi~v~~i 186 (252)
T PRK07035 151 PGDFQGIYSITKAAVISMTKAFAKECA--PFGIRVNAL 186 (252)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHh--hcCEEEEEE
Confidence 122333455543333445666666653 344544433
No 290
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.74 E-value=0.023 Score=52.00 Aligned_cols=37 Identities=30% Similarity=0.252 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
.+.+++.|+||+|.+|+.++..|+..|. +++++|.+.
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~--~v~~~~~~~ 42 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGA--KVIGFDQAF 42 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecch
Confidence 4456899999999999999999999887 899998764
No 291
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.025 Score=52.77 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=30.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
++|.|+||+|.+|..++..|+..|. +|++.+++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~ 35 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY--EVWATARKA 35 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4799999999999999999998887 899998765
No 292
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=96.73 E-value=0.016 Score=52.74 Aligned_cols=96 Identities=19% Similarity=0.318 Sum_probs=67.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~-~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
|||+|||. |.+|..+.-.+..... +.-+.+||.+.. .+..+......+. .+++.+.+.+.|+||.+|+
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~e--k~~~~~~~~~~~~------~s~ide~~~~~DlvVEaAS-- 69 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEE--KAKELEASVGRRC------VSDIDELIAEVDLVVEAAS-- 69 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHH--HHHHHHhhcCCCc------cccHHHHhhccceeeeeCC--
Confidence 68999998 9999999988876643 456778888652 2232332211111 1356677799999999985
Q ss_pred CCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 018265 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (358)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 167 (358)
.+.+++++.++-+.+.|.+|+-++--+|
T Consensus 70 --------------~~Av~e~~~~~L~~g~d~iV~SVGALad 97 (255)
T COG1712 70 --------------PEAVREYVPKILKAGIDVIVMSVGALAD 97 (255)
T ss_pred --------------HHHHHHHhHHHHhcCCCEEEEechhccC
Confidence 4778999999998888887776654443
No 293
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.73 E-value=0.046 Score=50.07 Aligned_cols=112 Identities=18% Similarity=0.261 Sum_probs=63.5
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCcH---Hhh-------hCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQL---EDA-------LTG 114 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d~---~~a-------l~~ 114 (358)
++.|+|++|.+|..++..|++.|. ++++++.+. ......++.... ..+..+.. -+|. +++ +..
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF--AVAVADLNEETAKETAKEINQAG--GKAVAYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999887 899998765 222223333221 12222211 1222 122 235
Q ss_pred CCEEEEcCCCCCC-C--CCCHH---hHHHHHHH----HHHHHHHHHHhhCCCeEEEEec
Q 018265 115 MDIVIIPAGVPRK-P--GMTRD---DLFNINAG----IVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 115 aDiVIi~ag~~~~-~--g~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t 163 (358)
.|+||+++|.... + +.+.. ..+..|+. +++.+.+.+++....+.+++++
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s 136 (254)
T TIGR02415 78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA 136 (254)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 6999999886321 1 22222 23445543 3345555555544446666654
No 294
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.046 Score=50.49 Aligned_cols=158 Identities=18% Similarity=0.197 Sum_probs=82.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEEeC-CCc---HHhhh-------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLG-QQQ---LEDAL------- 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~al------- 112 (358)
+..++.|+||+|.+|+.++..|+..|. ++++++++. ......++... ...+..+.. -+| .++++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 80 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA--NLILLDISPEIEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKE 80 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 446899999999999999999999887 899999865 22222223221 112222111 122 22222
Q ss_pred CCCCEEEEcCCCCCCC---CC---CHHhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 113 TGMDIVIIPAGVPRKP---GM---TRDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~---g~---~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
...|+||+.+|..... .. .....+..|+.....+.+.+..+ ...+.+++++.-.... ...
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~ 149 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM-----------VAD 149 (263)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------cCC
Confidence 3569999999863211 11 12234556666555555544332 2234566554421100 112
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+..-.++.+......+-+.+|+.+. +..+++..+
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~la~~~~--~~~i~v~~i 183 (263)
T PRK08226 150 PGETAYALTKAAIVGLTKSLAVEYA--QSGIRVNAI 183 (263)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence 2223344443333445666776664 334544433
No 295
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=96.73 E-value=0.0063 Score=58.62 Aligned_cols=120 Identities=20% Similarity=0.250 Sum_probs=70.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHH---HHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA---DISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~---dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||+|+|+ |.||+.++..|.+.+. .+.++-+.+. ...-. .+.+.......... ..++ .+.+..+|+||++.
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~--~V~~~~R~~~~~~l~~~GL~i~~~~~~~~~~~~-~~~~-~~~~~~~Dlviv~v 75 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGH--DVTLLVRSRRLEALKKKGLRIEDEGGNFTTPVV-AATD-AEALGPADLVIVTV 75 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEecHHHHHHHHhCCeEEecCCCccccccc-cccC-hhhcCCCCEEEEEe
Confidence 79999998 9999999999999983 6666654431 11100 11111110111111 1223 46678999999985
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcE-EEeeec
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRL-LGVTML 194 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kv-iG~t~l 194 (358)
-. --..+..+.+..+. |+++|+..=|=++..- .+++. +|.+++ .|+|..
T Consensus 76 Ka----------------~q~~~al~~l~~~~~~~t~vl~lqNG~g~~e-----~l~~~--~~~~~il~G~~~~ 126 (307)
T COG1893 76 KA----------------YQLEEALPSLAPLLGPNTVVLFLQNGLGHEE-----ELRKI--LPKETVLGGVTTH 126 (307)
T ss_pred cc----------------ccHHHHHHHhhhcCCCCcEEEEEeCCCcHHH-----HHHHh--CCcceEEEEEeee
Confidence 32 12334555666655 6778888888887763 33443 555555 467643
No 296
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.73 E-value=0.012 Score=55.96 Aligned_cols=65 Identities=18% Similarity=0.258 Sum_probs=48.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+||++||- |.+|+..+..|+..|+ ++..+|++..+. +..+..... .. ..++.++.++||+||.+.
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~--~v~v~~r~~~ka-~~~~~~~Ga----~~---a~s~~eaa~~aDvVitmv 65 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGH--EVTVYNRTPEKA-AELLAAAGA----TV---AASPAEAAAEADVVITML 65 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCC--EEEEEeCChhhh-hHHHHHcCC----cc---cCCHHHHHHhCCEEEEec
Confidence 58999998 9999999999999998 999999986332 222322111 11 234578999999999984
No 297
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.72 E-value=0.0045 Score=61.23 Aligned_cols=75 Identities=23% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHHhcCCCC-CeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTN-AVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~dl~~~~~~-~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
+|||.|||| |+||+.++..|++.+. .+|.+.|+... ...+.+..+.... ..+... ....+.+++++.|+||.++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~-d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTIADRSKEKCARIAELIGGKVEALQVDAA-DVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhhccccceeEEeccc-ChHHHHHHHhcCCEEEEeCC
Confidence 479999998 9999999999999875 59999998742 2222222211110 112111 12345788999999999864
No 298
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=96.72 E-value=0.011 Score=55.35 Aligned_cols=91 Identities=14% Similarity=0.181 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCC--cEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~--~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
..|||+|||+ |.+|++++..|...+.. .++..+|.+... + .... ..+..++++++|+||++.
T Consensus 2 ~~mkI~iIG~-G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~-----~-------~~~~---~~~~~~~~~~~D~Vilav 65 (260)
T PTZ00431 2 ENIRVGFIGL-GKMGSALAYGIENSNIIGKENIYYHTPSKKN-----T-------PFVY---LQSNEELAKTCDIIVLAV 65 (260)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCCCcceEEEECCChhc-----C-------CeEE---eCChHHHHHhCCEEEEEe
Confidence 3589999998 99999999999887642 358888875411 0 0111 234467789999999983
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 167 (358)
+ -..+.++++.+..+-++..||...+-+.
T Consensus 66 --k--------------p~~~~~vl~~i~~~l~~~~iIS~~aGi~ 94 (260)
T PTZ00431 66 --K--------------PDLAGKVLLEIKPYLGSKLLISICGGLN 94 (260)
T ss_pred --C--------------HHHHHHHHHHHHhhccCCEEEEEeCCcc
Confidence 1 1334444445544322334555556555
No 299
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.70 E-value=0.015 Score=57.35 Aligned_cols=57 Identities=23% Similarity=0.250 Sum_probs=43.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
.++||+|||.+|.+|..++..|.... ..+|..+|.+ |. ..+++++++++||+||++.
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~-~~~V~g~D~~----------d~----------~~~~~~~~v~~aDlVilav 59 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRM-QLEVIGHDPA----------DP----------GSLDPATLLQRADVLIFSA 59 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcC-CCEEEEEcCC----------cc----------ccCCHHHHhcCCCEEEEeC
Confidence 35699999988999999999998752 3388889863 11 1235578899999999984
No 300
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.69 E-value=0.043 Score=50.56 Aligned_cols=155 Identities=16% Similarity=0.119 Sum_probs=83.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFL-GQQQ---LEDAL------ 112 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al------ 112 (358)
.+.+++.|+||+|.+|++++..|+..|. +|+++|++. ......++.... ..+..+. .-+| .++++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGA--RVVLVDRSELVHEVAAELRAAG--GEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCchHHHHHHHHHHhcC--CeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 4456899999999999999999999887 899999875 222222332211 1221110 1122 22222
Q ss_pred -CCCCEEEEcCCCCC--CC--CCCH---HhHHHHHH----HHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 113 -TGMDIVIIPAGVPR--KP--GMTR---DDLFNINA----GIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 113 -~~aDiVIi~ag~~~--~~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
.+.|++|+.+|... .+ ..+. ...+..|+ .+.+.+.+.+.+.. .+.|++++.....
T Consensus 82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~------------ 148 (260)
T PRK12823 82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR------------ 148 (260)
T ss_pred cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc------------
Confidence 36799999987531 11 1121 12234444 34456666665443 3456666542210
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+ +..-.++.+......+.+.++..+. +..|++..+
T Consensus 149 -~-~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v 183 (260)
T PRK12823 149 -G-INRVPYSAAKGGVNALTASLAFEYA--EHGIRVNAV 183 (260)
T ss_pred -C-CCCCccHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence 1 1122466665445567777777763 344544444
No 301
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.033 Score=52.98 Aligned_cols=172 Identities=17% Similarity=0.076 Sum_probs=88.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHHhcCCCCCeEEEEeC-CCc---HHhh------
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRGFLG-QQQ---LEDA------ 111 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~-t~d---~~~a------ 111 (358)
.+.++|.|+||+|.+|++++..|+..|. ++++++++... ....++........+..+.. -.| .+++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGA--HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 3456899999999999999999999887 88999886522 11223331111112222111 112 2222
Q ss_pred -hCCCCEEEEcCCCCCCCC-C---CHHhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCCCCcc-HHHHHHHHHHhC
Q 018265 112 -LTGMDIVIIPAGVPRKPG-M---TRDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNST-VPIAAEVFKKVG 181 (358)
Q Consensus 112 -l~~aDiVIi~ag~~~~~g-~---~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~d~~-t~~~~~~~~~~~ 181 (358)
+...|+||+.||....+. . .-...+..|... .+.+.+.+++.. .+.|+++|...... ...-..-.....
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~ 170 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQWER 170 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCccc
Confidence 235899999998632111 1 112234455444 666677666543 45666665432110 000000000000
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
.+++...++.+.+....+.+.+++.+. ...+++.++.
T Consensus 171 ~~~~~~~Y~~SK~a~~~~~~~la~~l~--~~~i~v~~v~ 207 (306)
T PRK06197 171 RYNRVAAYGQSKLANLLFTYELQRRLA--AAGATTIAVA 207 (306)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhh--cCCCCeEEEE
Confidence 122233455555555667777787764 3344444443
No 302
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.038 Score=51.27 Aligned_cols=99 Identities=16% Similarity=0.205 Sum_probs=58.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
.++.|+||+|.+|.+++..++..|. ++++++.+....... ..+.. ...+.. .+...+..+.+...|++|+.||..
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G~--~Vi~~~r~~~~~~~~-~~~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~ 90 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKGA--KVIGLTHSKINNSES-NDESP-NEWIKWECGKEESLDKQLASLDVLILNHGIN 90 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEECCchhhhhh-hccCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence 5899999999999999999999887 889998865111111 11111 111111 111123445667899999999864
Q ss_pred CCCCCCH---HhHHHHHHHHHHHHHHH
Q 018265 126 RKPGMTR---DDLFNINAGIVKTLCEG 149 (358)
Q Consensus 126 ~~~g~~r---~~~~~~N~~i~~~i~~~ 149 (358)
.....+. .+.+..|+.....+++.
T Consensus 91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~ 117 (245)
T PRK12367 91 PGGRQDPENINKALEINALSSWRLLEL 117 (245)
T ss_pred CcCCCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3222222 33455666544444443
No 303
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.66 E-value=0.053 Score=49.55 Aligned_cols=157 Identities=16% Similarity=0.156 Sum_probs=78.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEe-CCC---cHHhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFL-GQQ---QLEDA------ 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~t~---d~~~a------ 111 (358)
+..+|.|+||+|++|++++..|+..+. ++++...+. ......++.... ..+..+. .-+ +...+
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS--LVVVNAKKRAEEMNETLKMVKENG--GEGIGVLADVSTREGCETLAKATID 80 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHHcC--CeeEEEEeccCCHHHHHHHHHHHHH
Confidence 345899999999999999999998887 666654332 111122222111 1111110 011 11122
Q ss_pred -hCCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 112 -LTGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 112 -l~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
+...|+||+++|..... +.+. ...+..|......+++.+.++- ..+.+++++.-.. +.+.
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------------~~~~ 148 (252)
T PRK06077 81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG------------IRPA 148 (252)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc------------cCCC
Confidence 34679999999863221 1122 1233445444444444443332 2356666553221 1123
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+....++.+......+...+++.++ + .+++.++.
T Consensus 149 ~~~~~Y~~sK~~~~~~~~~l~~~~~--~-~i~v~~v~ 182 (252)
T PRK06077 149 YGLSIYGAMKAAVINLTKYLALELA--P-KIRVNAIA 182 (252)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHh--c-CCEEEEEe
Confidence 3334455544444456666777764 2 45544443
No 304
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.65 E-value=0.017 Score=55.69 Aligned_cols=103 Identities=19% Similarity=0.257 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
.+.+||+|+|+ |.+|..++..+...+. .+|.++|++..+ ..+..+. ..+.. ..++++++.++|+||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~-~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGV-AEITIANRTYERAEELAKELG-----GNAVP---LDELLELLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHcC-----CeEEe---HHHHHHHHhcCCEEEEC
Confidence 45679999998 9999999988887553 489999987522 2222221 11111 13567889999999998
Q ss_pred CCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCccH
Q 018265 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTV 170 (358)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t 170 (358)
.+.+.. ..++.+..+.. .....+++-+++|-|+-.
T Consensus 246 t~~~~~------------~~~~~~~~~~~--~~~~~~viDlavPrdi~~ 280 (311)
T cd05213 246 TGAPHY------------AKIVERAMKKR--SGKPRLIVDLAVPRDIEP 280 (311)
T ss_pred CCCCch------------HHHHHHHHhhC--CCCCeEEEEeCCCCCCch
Confidence 775521 11112211111 123567888899999763
No 305
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.65 E-value=0.0096 Score=56.37 Aligned_cols=156 Identities=21% Similarity=0.217 Sum_probs=93.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCCEEEEcCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT--GMDIVIIPAGV 124 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~--~aDiVIi~ag~ 124 (358)
|||.|+|++|++|+.+...+. .+. +++-.|... +|+.+.. ...+.++ .-|+||++|.+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~--~v~a~~~~~-----~Ditd~~------------~v~~~i~~~~PDvVIn~AAy 60 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF--EVIATDRAE-----LDITDPD------------AVLEVIRETRPDVVINAAAY 60 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc--eEEeccCcc-----ccccChH------------HHHHHHHhhCCCEEEECccc
Confidence 679999999999999998887 434 777776543 4444322 1234444 56999999987
Q ss_pred CC--CCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec-CCC-CccHHHHHHHHHHhCC-CCCCcEEEeeeccHHHH
Q 018265 125 PR--KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NPV-NSTVPIAAEVFKKVGT-YDPKRLLGVTMLDVVRA 199 (358)
Q Consensus 125 ~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NP~-d~~t~~~~~~~~~~~~-~p~~kviG~t~lds~R~ 199 (358)
.. +...++..-+.-|+.....+++..++++ +++|.+| -.| |--.. . -++... -.|.+++|-+.+-...+
T Consensus 61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~---~-~Y~E~D~~~P~nvYG~sKl~GE~~ 134 (281)
T COG1091 61 TAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKG---G-PYKETDTPNPLNVYGRSKLAGEEA 134 (281)
T ss_pred cccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCC---C-CCCCCCCCCChhhhhHHHHHHHHH
Confidence 54 2233466667889999999999999874 5555553 333 00000 0 011111 23567888886655433
Q ss_pred HHHHHHHhCCCCCCC--ceEEEEecCCCccc-cccccc
Q 018265 200 NTFVAEVLGLDPREV--DVPVVGGHAGVTIL-PLLSQV 234 (358)
Q Consensus 200 ~~~lA~~l~v~~~~v--~~~v~G~hg~~~~v-p~~s~~ 234 (358)
-. ..+ +..-| ..||+|++|. +.+ +.+..+
T Consensus 135 v~----~~~-~~~~I~Rtswv~g~~g~-nFv~tml~la 166 (281)
T COG1091 135 VR----AAG-PRHLILRTSWVYGEYGN-NFVKTMLRLA 166 (281)
T ss_pred HH----HhC-CCEEEEEeeeeecCCCC-CHHHHHHHHh
Confidence 22 222 22222 5799999986 443 334433
No 306
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.64 E-value=0.13 Score=47.69 Aligned_cols=156 Identities=12% Similarity=0.174 Sum_probs=83.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEe-CCCcH---H-------
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFL-GQQQL---E------- 109 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~t~d~---~------- 109 (358)
++..+|.|+||++.+|.+++..|+..|. .|++.+... ......++.... ...+..+. .-+|. +
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGV--NIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKID 82 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 4556899999999999999999999887 788775432 222233333211 11222211 11221 1
Q ss_pred hhhCCCCEEEEcCCCCCC-------C--CCCH---HhHHHHHH----HHHHHHHHHHHhhCCCeEEEEecCCCCccHHHH
Q 018265 110 DALTGMDIVIIPAGVPRK-------P--GMTR---DDLFNINA----GIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIA 173 (358)
Q Consensus 110 ~al~~aDiVIi~ag~~~~-------~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~ 173 (358)
+.+...|++|..+|.... + ..+. ...+..|+ ...+.+.+.+++. +.+.|++++...+..
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~---- 157 (260)
T PRK08416 83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSSTGNLV---- 157 (260)
T ss_pred HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEecccccc----
Confidence 113468999999875311 1 0011 11223333 2344555555432 345677766543222
Q ss_pred HHHHHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceE
Q 018265 174 AEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVP 217 (358)
Q Consensus 174 ~~~~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~ 217 (358)
..|..-.++.+......+...++..++ +..|++.
T Consensus 158 --------~~~~~~~Y~asK~a~~~~~~~la~el~--~~gi~v~ 191 (260)
T PRK08416 158 --------YIENYAGHGTSKAAVETMVKYAATELG--EKNIRVN 191 (260)
T ss_pred --------CCCCcccchhhHHHHHHHHHHHHHHhh--hhCeEEE
Confidence 122223466666566667788888774 3445443
No 307
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.64 E-value=0.023 Score=54.62 Aligned_cols=115 Identities=12% Similarity=0.059 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-----
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL-GQQQ---LEDALT----- 113 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al~----- 113 (358)
+..+|.|+||+|.+|.+++..|+..|. +|++++++.. .....++... ...+..+. .-+| .+++++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW--HVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRAL 80 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 345899999999999999999999886 8999997652 2222333211 11222211 1112 222232
Q ss_pred --CCCEEEEcCCCCCC----CCCC---HHhHHHHHHH----HHHHHHHHHHhhCC-CeEEEEec
Q 018265 114 --GMDIVIIPAGVPRK----PGMT---RDDLFNINAG----IVKTLCEGIAKCCP-KAIVNLIS 163 (358)
Q Consensus 114 --~aDiVIi~ag~~~~----~g~~---r~~~~~~N~~----i~~~i~~~i~~~~p-~a~viv~t 163 (358)
..|++|+.||.... ...+ -...+..|.. +.+.+.+.+.+... .+.|++++
T Consensus 81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vs 144 (322)
T PRK07453 81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILG 144 (322)
T ss_pred CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEc
Confidence 48999999985321 1112 1233455654 44444555554432 34666665
No 308
>PRK09186 flagellin modification protein A; Provisional
Probab=96.63 E-value=0.025 Score=51.96 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+.++|.|+||+|.+|.+++..|+..|. ++++.+++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~--~v~~~~r~~ 38 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG--IVIAADIDK 38 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCh
Confidence 456899999999999999999999887 889998765
No 309
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=96.63 E-value=0.1 Score=47.27 Aligned_cols=144 Identities=15% Similarity=0.157 Sum_probs=75.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEe-CCCc------HHhhhCCCCEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFL-GQQQ------LEDALTGMDIVI 119 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~-~t~d------~~~al~~aDiVI 119 (358)
|+|+|+||+|.+|+.++..|+..+....+++.+.+.... .. ...+..+. .-+| ..+.+...|+||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~----~~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQ----HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----cc----cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 589999999999999999998875433667666544211 11 11121111 0111 223356889999
Q ss_pred EcCCCCCCC---------CCCHH---hHHHHHH----HHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 120 IPAGVPRKP---------GMTRD---DLFNINA----GIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 120 i~ag~~~~~---------g~~r~---~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
+++|..... ..+.. ..+..|+ .+.+.+.+.+++.. .+.++++|....... . ..+
T Consensus 73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~--------~-~~~ 142 (235)
T PRK09009 73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSIS--------D-NRL 142 (235)
T ss_pred ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccc--------c-CCC
Confidence 999875321 11111 1233333 44455555554332 245666553222210 0 012
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhC
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
+..-.++.+......|-..++..++
T Consensus 143 ~~~~~Y~asK~a~~~~~~~la~e~~ 167 (235)
T PRK09009 143 GGWYSYRASKAALNMFLKTLSIEWQ 167 (235)
T ss_pred CCcchhhhhHHHHHHHHHHHHHHhh
Confidence 3334566654444456677777664
No 310
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.63 E-value=0.011 Score=56.68 Aligned_cols=64 Identities=16% Similarity=0.252 Sum_probs=44.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC---CCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTG---MDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~---aDiVIi~a 122 (358)
|||+|||. |.+|+.++..|+..+. +|.++|+++.. ..++.+.. +.. ..++++.++. +|+||++.
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~~~~e~~~~~~~~dvvi~~v 67 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGH--EVVGYDRNPEA--VEALAEEG----ATG---ADSLEELVAKLPAPRVVWLMV 67 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHhhcCCCCEEEEEe
Confidence 58999998 9999999999998887 89999987522 22232211 111 2345555554 69988874
No 311
>PLN03139 formate dehydrogenase; Provisional
Probab=96.62 E-value=0.023 Score=56.48 Aligned_cols=101 Identities=21% Similarity=0.214 Sum_probs=63.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
....++|+|+|. |.||+.++..+..-|. +|+.+|......... .+. .+.. ..++++.+++||+|++..
T Consensus 196 ~L~gktVGIVG~-G~IG~~vA~~L~afG~--~V~~~d~~~~~~~~~--~~~----g~~~---~~~l~ell~~sDvV~l~l 263 (386)
T PLN03139 196 DLEGKTVGTVGA-GRIGRLLLQRLKPFNC--NLLYHDRLKMDPELE--KET----GAKF---EEDLDAMLPKCDVVVINT 263 (386)
T ss_pred CCCCCEEEEEee-cHHHHHHHHHHHHCCC--EEEEECCCCcchhhH--hhc----Ccee---cCCHHHHHhhCCEEEEeC
Confidence 455679999998 9999999999987666 889999764211111 111 1111 236889999999999974
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec--CCCCc
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS--NPVNS 168 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NP~d~ 168 (358)
-.. ..+-.++. .+.+....|.+++||++ ..+|.
T Consensus 264 Plt-----------~~T~~li~--~~~l~~mk~ga~lIN~aRG~iVDe 298 (386)
T PLN03139 264 PLT-----------EKTRGMFN--KERIAKMKKGVLIVNNARGAIMDT 298 (386)
T ss_pred CCC-----------HHHHHHhC--HHHHhhCCCCeEEEECCCCchhhH
Confidence 221 11222221 23444445788999975 44443
No 312
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.0089 Score=54.67 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+|+|.|+||+|.+|.+++..|+..|. ++++++++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~--~v~~~~r~~ 35 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI--AVLGVARSR 35 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC--EEEEEecCc
Confidence 46999999999999999999998887 889998765
No 313
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.60 E-value=0.064 Score=48.98 Aligned_cols=146 Identities=15% Similarity=0.179 Sum_probs=74.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-eCCCc--hhHHHHHhcCCCCCeEEEEeC----CCcHHhhh------
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTNAVVRGFLG----QQQLEDAL------ 112 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~-D~~~~--~g~~~dl~~~~~~~~v~~~~~----t~d~~~al------ 112 (358)
.++|.|+||+|.+|+.++..|+..|. ++++. +.+.. .....++.... ..+..+.. ..+...++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGY--DIAVNYARSRKAAEETAEEIEALG--RKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999886 76654 44331 22222333221 12222111 11222223
Q ss_pred -CCCCEEEEcCCCCC-CC--CCCHH---hHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHhCC
Q 018265 113 -TGMDIVIIPAGVPR-KP--GMTRD---DLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (358)
Q Consensus 113 -~~aDiVIi~ag~~~-~~--g~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~~~ 182 (358)
...|+||+.+|... .+ ..+.. ..+..|......+++.+.++ .+.+.++++|.-... .+
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~ 147 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI------------RY 147 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc------------cC
Confidence 35899999987532 11 11111 12345555444455444433 234566666542211 12
Q ss_pred CCCCcEEEeeeccHHHHHHHHHHHh
Q 018265 183 YDPKRLLGVTMLDVVRANTFVAEVL 207 (358)
Q Consensus 183 ~p~~kviG~t~lds~R~~~~lA~~l 207 (358)
.+..-.++.+......+-..++..+
T Consensus 148 ~~~~~~y~~sK~a~~~~~~~~~~~~ 172 (250)
T PRK08063 148 LENYTTVGVSKAALEALTRYLAVEL 172 (250)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHH
Confidence 2333345555444445555556554
No 314
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.60 E-value=0.034 Score=50.35 Aligned_cols=151 Identities=16% Similarity=0.100 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeC-CCc-HH---hhhCCCCEEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLG-QQQ-LE---DALTGMDIVI 119 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~-t~d-~~---~al~~aDiVI 119 (358)
+.+++.|+||+|.+|++++..|++.|. +++++|++.... . . ..+..+.. -+| .+ +.+...|+||
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~----~---~--~~~~~~~~D~~~~~~~~~~~~~~id~lv 72 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGA--QVYGVDKQDKPD----L---S--GNFHFLQLDLSDDLEPLFDWVPSVDILC 72 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCC--EEEEEeCCcccc----c---C--CcEEEEECChHHHHHHHHHhhCCCCEEE
Confidence 345899999999999999999999887 899998864210 0 0 11111111 011 12 2345789999
Q ss_pred EcCCCCCC--C--CCCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEE
Q 018265 120 IPAGVPRK--P--GMTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLL 189 (358)
Q Consensus 120 i~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kvi 189 (358)
+.+|.... + ..+. ...+..|+.....+.+.+... .+.+.+++++...... +.+..-.+
T Consensus 73 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~~~~~Y 140 (235)
T PRK06550 73 NTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV------------AGGGGAAY 140 (235)
T ss_pred ECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc------------CCCCCccc
Confidence 99986421 1 1111 223555655444444444321 2335566655332111 22223345
Q ss_pred EeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 190 GVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 190 G~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.+......+...+++.++ +..+++.++-
T Consensus 141 ~~sK~a~~~~~~~la~~~~--~~gi~v~~v~ 169 (235)
T PRK06550 141 TASKHALAGFTKQLALDYA--KDGIQVFGIA 169 (235)
T ss_pred HHHHHHHHHHHHHHHHHhh--hcCeEEEEEe
Confidence 5554333445677777763 3455544443
No 315
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.06 Score=52.25 Aligned_cols=115 Identities=17% Similarity=0.103 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQ---LEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al------ 112 (358)
+..+|+|+||+|.+|..++..|+..|. +|++++++. +.....++.... ..+..+. .-+| .++++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~--~Vvl~~R~~~~l~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA--RLVLAARDEEALQAVAEECRALG--AEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 345899999999999999999999987 899999876 222233343221 1221110 1122 22222
Q ss_pred -CCCCEEEEcCCCCCCC---CCC---HHhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 018265 113 -TGMDIVIIPAGVPRKP---GMT---RDDLFNINAGI----VKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 164 (358)
...|++|+.+|..... ..+ -...+..|+-. .+...+.+.+.. .+.+|+++.
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS 143 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMIS 143 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcC
Confidence 4679999999864321 111 12234455443 344444454432 456666554
No 316
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.16 Score=46.25 Aligned_cols=37 Identities=19% Similarity=0.198 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
++.++|.|+||+|.+|.+++..|+..|. .|++++++.
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~--~V~~~~r~~ 40 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGA--TVILVARHQ 40 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence 3446899999999999999999999887 899999876
No 317
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.59 E-value=0.0042 Score=57.14 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=31.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
|+|+|+|+ |.+|+++|..|...|. +++++|.++
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~--~Vv~Id~d~ 33 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH--NVVLIDRDE 33 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCC--ceEEEEcCH
Confidence 69999998 9999999999999988 999999986
No 318
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.057 Score=49.76 Aligned_cols=35 Identities=31% Similarity=0.420 Sum_probs=31.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
...+.|+||+|.+|++++..|+..|. ++++.|.+.
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~--~v~~~~r~~ 42 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGA--DVALFDLRT 42 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 34899999999999999999999887 899999764
No 319
>PRK08324 short chain dehydrogenase; Validated
Probab=96.58 E-value=0.041 Score=58.76 Aligned_cols=115 Identities=22% Similarity=0.275 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQ---LEDAL------ 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al------ 112 (358)
+.++|.|+||+|.+|+.++..|+..|. +|+++|++. ......++... ..+..+. .-+| .++++
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga--~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~ 495 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGA--CVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA 495 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 446899999999999999999998887 899999876 22222223221 1111111 1122 22223
Q ss_pred -CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecC
Q 018265 113 -TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGI----VKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 113 -~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 164 (358)
.+.|+||.++|..... ..+. ...+..|... ++...+.+++....+.+++++.
T Consensus 496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS 558 (681)
T PRK08324 496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIAS 558 (681)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 3689999999864321 1111 1223444444 4444555554333356666654
No 320
>PLN00016 RNA-binding protein; Provisional
Probab=96.56 E-value=0.026 Score=55.66 Aligned_cols=100 Identities=20% Similarity=0.189 Sum_probs=59.0
Q ss_pred CCEEEEE----cCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHH------HHhcCCCCCeEEEEeC-CCcHHhhh--
Q 018265 46 GFKVAVL----GAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA------DISHMDTNAVVRGFLG-QQQLEDAL-- 112 (358)
Q Consensus 46 ~~KI~Ii----Ga~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~------dl~~~~~~~~v~~~~~-t~d~~~al-- 112 (358)
++||.|+ ||+|++|++++..|+..|. +|++++++......+ ++.+.. ...++.+.+ -.|+++.+
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~~~~~ 128 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH--EVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTVWGDPADVKSKVAG 128 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC--EEEEEecCCcchhhhccCchhhhhHhh-hcCceEEEecHHHHHhhhcc
Confidence 4689999 9999999999999999887 999998865211100 011100 011222211 12334444
Q ss_pred CCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 113 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
.++|+||.+++.. ....+.+++.+++.+.+ .+|++|
T Consensus 129 ~~~d~Vi~~~~~~--------------~~~~~~ll~aa~~~gvk-r~V~~S 164 (378)
T PLN00016 129 AGFDVVYDNNGKD--------------LDEVEPVADWAKSPGLK-QFLFCS 164 (378)
T ss_pred CCccEEEeCCCCC--------------HHHHHHHHHHHHHcCCC-EEEEEc
Confidence 5799999886421 23345566666665443 445444
No 321
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.56 E-value=0.016 Score=56.51 Aligned_cols=100 Identities=20% Similarity=0.251 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
....++|+|||. |.||+.+|..+...|. +|..+|....... +.... +. ..++++.+++||+|++..
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--~~~~~-----~~----~~~l~ell~~aDiV~l~l 212 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGM--RILYYSRTRKPEA--EKELG-----AE----YRPLEELLRESDFVSLHV 212 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCChhh--HHHcC-----CE----ecCHHHHHhhCCEEEEeC
Confidence 345679999998 9999999999987776 8999997642211 11111 11 125788899999999985
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec--CCCCcc
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS--NPVNST 169 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NP~d~~ 169 (358)
-.. ..+-.++.+ +.+....|++++||++ ..+|.-
T Consensus 213 P~t-----------~~T~~~i~~--~~~~~mk~ga~lIN~aRg~~vd~~ 248 (333)
T PRK13243 213 PLT-----------KETYHMINE--ERLKLMKPTAILVNTARGKVVDTK 248 (333)
T ss_pred CCC-----------hHHhhccCH--HHHhcCCCCeEEEECcCchhcCHH
Confidence 321 111222211 2333334789999985 555543
No 322
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.56 E-value=0.0076 Score=57.64 Aligned_cols=64 Identities=20% Similarity=0.302 Sum_probs=47.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+||+|||. |.+|..++..|+..+. +|.++|++... ..++.... .. ...++.+++++||+||++.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~--~V~v~d~~~~~--~~~~~~~g----~~---~~~s~~~~~~~aDvVi~~v 65 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGH--QLQVFDVNPQA--VDALVDKG----AT---PAASPAQAAAGAEFVITML 65 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcC----Cc---ccCCHHHHHhcCCEEEEec
Confidence 48999998 9999999999999887 89999987522 22232211 11 1245678899999999984
No 323
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.55 E-value=0.075 Score=48.94 Aligned_cols=157 Identities=13% Similarity=0.168 Sum_probs=82.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCCE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDA-------LTGMDI 117 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~aDi 117 (358)
.+++.|+||+|.+|.+++..|+..|. ++++.+.+.. ....++.+... ..+.. .+...+.+++ +...|+
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~--~v~~~~~~~~-~~~~~l~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGA--KVAVLYNSAE-NEAKELREKGV-FTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCcH-HHHHHHHhCCC-eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999887 7887765431 11222322110 00110 1011122222 236799
Q ss_pred EEEcCCCCCC-C--CCCH---HhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 118 VIIPAGVPRK-P--GMTR---DDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 118 VIi~ag~~~~-~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
||+++|.... + ..+. ...+..|+.- .+.+.+.+++. ..+.||+++...... ...+..-
T Consensus 83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~-----------~~~~~~~ 150 (255)
T PRK06463 83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIASNAGIG-----------TAAEGTT 150 (255)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHhCC-----------CCCCCcc
Confidence 9999987432 1 1122 1234445444 56666666543 345666665422110 0112223
Q ss_pred EEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 188 LLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 188 viG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
.++.+......+-+.++..++ +..|++.++.
T Consensus 151 ~Y~asKaa~~~~~~~la~e~~--~~~i~v~~i~ 181 (255)
T PRK06463 151 FYAITKAGIIILTRRLAFELG--KYGIRVNAVA 181 (255)
T ss_pred HhHHHHHHHHHHHHHHHHHhh--hcCeEEEEEe
Confidence 355554444456666776653 4456555554
No 324
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.54 E-value=0.022 Score=50.51 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=61.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-NAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~-~~~v~~~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
|||+||||+|.+|+.++.....+|. |++-+=++..+-.+ ++.... ..++ + .-+.+.+++.|-|+||-.-|..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH--eVTAivRn~~K~~~--~~~~~i~q~Di--f-d~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH--EVTAIVRNASKLAA--RQGVTILQKDI--F-DLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC--eeEEEEeChHhccc--cccceeecccc--c-ChhhhHhhhcCCceEEEeccCC
Confidence 7999999999999999999999998 88888766521111 010000 0111 1 1123457899999999986644
Q ss_pred CCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 126 RKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 126 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
. ++. . ..-.+-...+...++... ...++++.
T Consensus 74 ~-~~~--~---~~~~k~~~~li~~l~~ag-v~RllVVG 104 (211)
T COG2910 74 A-SDN--D---ELHSKSIEALIEALKGAG-VPRLLVVG 104 (211)
T ss_pred C-CCh--h---HHHHHHHHHHHHHHhhcC-CeeEEEEc
Confidence 2 121 1 112233555555665433 45677764
No 325
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.045 Score=49.47 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=31.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
++|.|+||+|.+|+.++..|+..|. +|+++|++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW--QVTATVRGP 35 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC--EEEEEeCCC
Confidence 4799999999999999999999887 899999876
No 326
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.53 E-value=0.034 Score=53.73 Aligned_cols=93 Identities=18% Similarity=0.242 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
....+|+|+|. |.||+.++..|..-|. ++..+|....... .+..+....++++++++||+|+++..
T Consensus 134 l~g~tvgIvG~-G~IG~~vA~~l~afG~--~V~~~~~~~~~~~-----------~~~~~~~~~~l~e~l~~aDvvv~~lP 199 (312)
T PRK15469 134 REDFTIGILGA-GVLGSKVAQSLQTWGF--PLRCWSRSRKSWP-----------GVQSFAGREELSAFLSQTRVLINLLP 199 (312)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCCCC-----------CceeecccccHHHHHhcCCEEEECCC
Confidence 34469999998 9999999999987777 8999997431100 00111112467899999999999843
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
.. ..|-.++. .+.+.+..|++++||++
T Consensus 200 lt-----------~~T~~li~--~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 200 NT-----------PETVGIIN--QQLLEQLPDGAYLLNLA 226 (312)
T ss_pred CC-----------HHHHHHhH--HHHHhcCCCCcEEEECC
Confidence 21 12233332 23444445789999986
No 327
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.53 E-value=0.041 Score=52.86 Aligned_cols=115 Identities=17% Similarity=0.134 Sum_probs=68.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcC-------CCCC-eEEEEeCCCcHHhhhCCCCE
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-------DTNA-VVRGFLGQQQLEDALTGMDI 117 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~-------~~~~-~v~~~~~t~d~~~al~~aDi 117 (358)
.|||+|+|+ |.||..++..|...|. ++.++++... ....+... .... .+... ..+ .+.....|+
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~~~G~--~V~lv~r~~~--~~~~i~~~~Gl~i~~~g~~~~~~~~--~~~-~~~~~~~D~ 73 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLARAGL--PVRLILRDRQ--RLAAYQQAGGLTLVEQGQASLYAIP--AET-ADAAEPIHR 73 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHHhCCC--CeEEEEechH--HHHHHhhcCCeEEeeCCcceeeccC--CCC-cccccccCE
Confidence 479999998 9999999999998886 8999987531 11111110 0000 11111 111 123568899
Q ss_pred EEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe
Q 018265 118 VIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (358)
Q Consensus 118 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~ 191 (358)
||++.-. .. ..+.++.+..+ .+++.|+.+-|=++....+ +++ ++.+++++-
T Consensus 74 viv~vK~------------~~----~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l-----~~~--~~~~~v~~g 125 (305)
T PRK05708 74 LLLACKA------------YD----AEPAVASLAHRLAPGAELLLLQNGLGSQDAV-----AAR--VPHARCIFA 125 (305)
T ss_pred EEEECCH------------Hh----HHHHHHHHHhhCCCCCEEEEEeCCCCCHHHH-----HHh--CCCCcEEEE
Confidence 9998521 11 22333444443 3788888888988876432 333 566677655
No 328
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=96.53 E-value=0.007 Score=57.19 Aligned_cols=150 Identities=13% Similarity=0.089 Sum_probs=84.5
Q ss_pred EEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC--CCCEEEEcCCCCCC
Q 018265 50 AVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT--GMDIVIIPAGVPRK 127 (358)
Q Consensus 50 ~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~--~aDiVIi~ag~~~~ 127 (358)
.|+||+|+||++++..|+..+. +++++.... ..|+.+ ..++++.++ ++|+||++|+....
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~--~v~~~~~~~----~~Dl~~------------~~~l~~~~~~~~~d~Vih~A~~~~~ 62 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGF--TNLVLRTHK----ELDLTR------------QADVEAFFAKEKPTYVILAAAKVGG 62 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCC--cEEEeeccc----cCCCCC------------HHHHHHHHhccCCCEEEEeeeeecc
Confidence 3899999999999999988776 444443211 112211 123444444 57999999875321
Q ss_pred ---CCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC-------CCccHHHHHHHHH-HhCCCCCCcEEEeeeccH
Q 018265 128 ---PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-------VNSTVPIAAEVFK-KVGTYDPKRLLGVTMLDV 196 (358)
Q Consensus 128 ---~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-------~d~~t~~~~~~~~-~~~~~p~~kviG~t~lds 196 (358)
......+....|......+++.+++.... .+|+.|.- ..... |-.. ..+.-|....+|.+....
T Consensus 63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~i~~SS~~vyg~~~~~~~~----E~~~~~~~~~p~~~~Y~~sK~~~ 137 (306)
T PLN02725 63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVK-KLLFLGSSCIYPKFAPQPIP----ETALLTGPPEPTNEWYAIAKIAG 137 (306)
T ss_pred cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCC-eEEEeCceeecCCCCCCCCC----HHHhccCCCCCCcchHHHHHHHH
Confidence 12234567788999999999999987543 34444321 11111 1000 001111122366665555
Q ss_pred HHHHHHHHHHhCCCCCCCc-eEEEEec
Q 018265 197 VRANTFVAEVLGLDPREVD-VPVVGGH 222 (358)
Q Consensus 197 ~R~~~~lA~~l~v~~~~v~-~~v~G~h 222 (358)
.++...+.+..+++...++ ..++|.+
T Consensus 138 e~~~~~~~~~~~~~~~~~R~~~vyG~~ 164 (306)
T PLN02725 138 IKMCQAYRIQYGWDAISGMPTNLYGPH 164 (306)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCCC
Confidence 5555555666677655554 4578864
No 329
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.50 E-value=0.021 Score=51.50 Aligned_cols=36 Identities=25% Similarity=0.447 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+..||+|+|+ |.+|+.++..|+..|+ .+|.++|.+.
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv-~~i~lvD~d~ 55 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGV-GTIVIVDDDH 55 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCC-CeEEEecCCE
Confidence 4458999998 9999999999999886 4999999873
No 330
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.12 Score=47.87 Aligned_cols=118 Identities=14% Similarity=0.139 Sum_probs=66.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCcHH---h-------h
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQLE---D-------A 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d~~---~-------a 111 (358)
+...+.|+||+|.+|.+++..|+..|. .|++++++. ......++........+..+. .-+|.+ + .
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA--SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 345899999999999999999999887 899999876 222223333221111222211 112221 1 2
Q ss_pred hCCCCEEEEcCCCCCCC---CCCH---HhHHHHH----HHHHHHHHHHHHhhCCCeEEEEecCC
Q 018265 112 LTGMDIVIIPAGVPRKP---GMTR---DDLFNIN----AGIVKTLCEGIAKCCPKAIVNLISNP 165 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP 165 (358)
+...|++|+.+|..... ..+. ...+..| ....+.+.+.+++. ..+.|++++.-
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~ 147 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNSL 147 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEeccc
Confidence 34579999999864311 1111 1122333 34456666666543 34566666543
No 331
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.49 E-value=0.011 Score=49.49 Aligned_cols=35 Identities=26% Similarity=0.388 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
..||+|+|+ |.+|+.++..|+..|. .++.|+|.+.
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv-~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGV-GKITLVDDDI 36 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTT-SEEEEEESSB
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCC-CceeecCCcc
Confidence 459999998 9999999999999886 5999999875
No 332
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.49 E-value=0.11 Score=47.54 Aligned_cols=155 Identities=15% Similarity=0.134 Sum_probs=78.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEe-C---CCcHHhh-------h
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFL-G---QQQLEDA-------L 112 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~---t~d~~~a-------l 112 (358)
++|.|+||+|.+|+.++..|+..+. ++++.+.+. ......++.... .++..+. . ..+.+++ +
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW--SVGINYARDAAAAEETADAVRAAG--GRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 4899999999999999999999886 777765433 222223333221 1222111 1 1122222 2
Q ss_pred CCCCEEEEcCCCCCC--C--CCCHH---hHHHHHHHHH----HHHHHHHHhhC--CCeEEEEecCCCCccHHHHHHHHHH
Q 018265 113 TGMDIVIIPAGVPRK--P--GMTRD---DLFNINAGIV----KTLCEGIAKCC--PKAIVNLISNPVNSTVPIAAEVFKK 179 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~--~--g~~r~---~~~~~N~~i~----~~i~~~i~~~~--p~a~viv~tNP~d~~t~~~~~~~~~ 179 (358)
...|++|+.+|.... + ..+.. ..+..|.... +.+.+.+.... +.+.+|+++......
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~---------- 148 (248)
T PRK06947 79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL---------- 148 (248)
T ss_pred CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC----------
Confidence 368999999985321 1 12222 2244554433 34444443221 245677666543221
Q ss_pred hCCCCCC-cEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 180 VGTYDPK-RLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 180 ~~~~p~~-kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+.+.. ..++.+......+-..+++.+. +..+++.++
T Consensus 149 --~~~~~~~~Y~~sK~~~~~~~~~la~~~~--~~~i~v~~i 185 (248)
T PRK06947 149 --GSPNEYVDYAGSKGAVDTLTLGLAKELG--PHGVRVNAV 185 (248)
T ss_pred --CCCCCCcccHhhHHHHHHHHHHHHHHhh--hhCcEEEEE
Confidence 11111 2355554444456666777663 344544433
No 333
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.49 E-value=0.013 Score=49.91 Aligned_cols=74 Identities=20% Similarity=0.295 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
.+.+||+|+|+ |.+|..++..+...+ ..++.++|.+.. ...+.++... ..... ..|.++.++++|+||++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGEL--GIAIA----YLDLEELLAEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhc--cccee----ecchhhccccCCEEEeC
Confidence 34569999998 999999999998876 348999998752 2222222211 00111 13456668999999998
Q ss_pred CCCC
Q 018265 122 AGVP 125 (358)
Q Consensus 122 ag~~ 125 (358)
....
T Consensus 89 ~~~~ 92 (155)
T cd01065 89 TPVG 92 (155)
T ss_pred cCCC
Confidence 6543
No 334
>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=96.49 E-value=0.0073 Score=55.04 Aligned_cols=104 Identities=19% Similarity=0.277 Sum_probs=67.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC------chhHHH---HHhcCC-CC------CeEEEEeCCCcHHh
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTA---DISHMD-TN------AVVRGFLGQQQLED 110 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~------~~g~~~---dl~~~~-~~------~~v~~~~~t~d~~~ 110 (358)
-||+|+|. |.+|+..|..++..|+ ++.|||+.+ +..... +|+... .. ..+..++++++++|
T Consensus 4 ~ki~ivgS-gl~g~~WAmlFAs~Gy--qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E 80 (313)
T KOG2305|consen 4 GKIAIVGS-GLVGSSWAMLFASSGY--QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNE 80 (313)
T ss_pred cceeEeec-ccccchHHHHHhccCc--eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhCCccHHH
Confidence 48999997 9999999999999999 999999976 122222 333221 11 11222456788999
Q ss_pred hhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCcc
Q 018265 111 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNST 169 (358)
Q Consensus 111 al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~ 169 (358)
+.++|=.|-.++ .+-+.+-+++.+++.+.. |+. |..|.....+
T Consensus 81 ~vk~Ai~iQEcv--------------pE~L~lkk~ly~qlD~i~d~~t--IlaSSTSt~m 124 (313)
T KOG2305|consen 81 LVKGAIHIQECV--------------PEDLNLKKQLYKQLDEIADPTT--ILASSTSTFM 124 (313)
T ss_pred HHhhhhhHHhhc--------------hHhhHHHHHHHHHHHHhcCCce--EEeccccccC
Confidence 999885443342 334566677788888765 544 4445444444
No 335
>PRK12743 oxidoreductase; Provisional
Probab=96.48 E-value=0.13 Score=47.49 Aligned_cols=146 Identities=14% Similarity=0.086 Sum_probs=75.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEe-CCCcH---Hhhh-------
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFL-GQQQL---EDAL------- 112 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~t~d~---~~al------- 112 (358)
.+|.|+||+|.+|++++..|+..|. ++++++... ......++.... ..+..+. .-+|. +.++
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF--DIGITWHSDEEGAKETAEEVRSHG--VRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3799999999999999999999987 887775433 112222333221 1222211 11222 1222
Q ss_pred CCCCEEEEcCCCCCCC---CCC---HHhHHHHHHHHHHHHHHHHH----hhCCCeEEEEecCCCCccHHHHHHHHHHhCC
Q 018265 113 TGMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIA----KCCPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~ 182 (358)
...|+||+.+|..... ..+ -...+..|+.....+.+.+. +....+.+++++.-.... +
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~------------~ 146 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT------------P 146 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC------------C
Confidence 3579999998864321 111 12334555554444444433 333346677766532211 1
Q ss_pred CCCCcEEEeeeccHHHHHHHHHHHhC
Q 018265 183 YDPKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 183 ~p~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
.+..-.++.+......+.+.++..+.
T Consensus 147 ~~~~~~Y~~sK~a~~~l~~~la~~~~ 172 (256)
T PRK12743 147 LPGASAYTAAKHALGGLTKAMALELV 172 (256)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 22223444443333445566666653
No 336
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.48 E-value=0.012 Score=52.48 Aligned_cols=76 Identities=20% Similarity=0.207 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEe--CCCcHHhhhCCCCEEEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL--GQQQLEDALTGMDIVII 120 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~--~t~d~~~al~~aDiVIi 120 (358)
+.+||.|+||+|.+|..++..|...+. ++.+++++.. .....++.+.. ...+.... ...+..++++++|+||.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~--~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~ 103 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA--RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFA 103 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence 345999999889999999999988775 8999987652 22222232111 12222211 11234578899999888
Q ss_pred cCC
Q 018265 121 PAG 123 (358)
Q Consensus 121 ~ag 123 (358)
+..
T Consensus 104 at~ 106 (194)
T cd01078 104 AGA 106 (194)
T ss_pred CCC
Confidence 754
No 337
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.039 Score=50.78 Aligned_cols=143 Identities=19% Similarity=0.160 Sum_probs=76.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhhC-------
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL-GQQQ---LEDALT------- 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------- 113 (358)
.++.|+||+|.+|..++..|+..|. +++++|++.. .....++.. ..+..+. .-.| +..++.
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD--RVLALDIDAAALAAFADALGD----ARFVPVACDLTDAASLAAALANAAAERG 76 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3799999999999999999998886 8999998652 112222321 1111110 1122 222332
Q ss_pred CCCEEEEcCCCCCCCC---CCH---HhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecCCCCccHHHHHHHHHHhCCCC
Q 018265 114 GMDIVIIPAGVPRKPG---MTR---DDLFNINAGIVKTLCEGIAKC---CPKAIVNLISNPVNSTVPIAAEVFKKVGTYD 184 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p 184 (358)
+.|+||+++|...... .+. ...+..|......+.+.+... ...+.+++++...... ..+.
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------~~~~- 145 (257)
T PRK07074 77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA----------ALGH- 145 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC----------CCCC-
Confidence 5799999988643211 111 122345555444444444321 2345566655422110 0111
Q ss_pred CCcEEEeeeccHHHHHHHHHHHhC
Q 018265 185 PKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 185 ~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
-.++.+.....++...+++.++
T Consensus 146 --~~y~~sK~a~~~~~~~~a~~~~ 167 (257)
T PRK07074 146 --PAYSAAKAGLIHYTKLLAVEYG 167 (257)
T ss_pred --cccHHHHHHHHHHHHHHHHHHh
Confidence 2355554444566677777764
No 338
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.47 E-value=0.016 Score=54.18 Aligned_cols=68 Identities=18% Similarity=0.250 Sum_probs=45.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~-~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||+|||+ |.+|++++..|...++ ...+.++|.+... ..++.+.. ..+.. ..|..+++++||+||++.
T Consensus 1 m~IgiIG~-G~mG~aia~~L~~~g~~~~~i~v~~r~~~~--~~~l~~~~--~~~~~---~~~~~~~~~~aDvVilav 69 (258)
T PRK06476 1 MKIGFIGT-GAITEAMVTGLLTSPADVSEIIVSPRNAQI--AARLAERF--PKVRI---AKDNQAVVDRSDVVFLAV 69 (258)
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCChheEEEECCCHHH--HHHHHHHc--CCceE---eCCHHHHHHhCCEEEEEe
Confidence 58999998 9999999999988774 3456778765422 22222211 11222 235667789999999985
No 339
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.46 E-value=0.014 Score=48.54 Aligned_cols=72 Identities=22% Similarity=0.328 Sum_probs=44.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhH-HHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV-TADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~-~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||+|+|++|.+|+.++..+...+-..=+..+|.+. ..|. .-++.... ...+.. +.|+++.++.+|+||-..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~-~~~~~v---~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG-PLGVPV---TDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS-T-SSBE---BS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC-Cccccc---chhHHHhcccCCEEEEcC
Confidence 699999999999999999998854332345566654 1221 12222221 122222 368889999999888763
No 340
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.46 E-value=0.0091 Score=55.71 Aligned_cols=107 Identities=21% Similarity=0.318 Sum_probs=71.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhC----CCC-----cEEEEEeCCC--chh------HHHHHhcCCCCCeEEEEeCCCc
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVN--TPG------VTADISHMDTNAVVRGFLGQQQ 107 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~----~~~-----~el~L~D~~~--~~g------~~~dl~~~~~~~~v~~~~~t~d 107 (358)
+..||++.|| |..|-.++.+|... |+- ..++|+|.+. ..+ ....+.+... + ... ..+
T Consensus 24 ~d~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~-~-~~~---~~~ 97 (255)
T PF03949_consen 24 SDQRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTN-P-EKD---WGS 97 (255)
T ss_dssp GG-EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSS-T-TT-----SS
T ss_pred HHcEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCc-c-ccc---ccC
Confidence 3458999999 99999999877654 763 7899999875 111 1222222211 1 111 147
Q ss_pred HHhhhCCC--CEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC--ccHH
Q 018265 108 LEDALTGM--DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN--STVP 171 (358)
Q Consensus 108 ~~~al~~a--DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d--~~t~ 171 (358)
+.|+++++ |++|=+.+.+ | -+-+++++.|.+++++.+|+=.|||.. -.++
T Consensus 98 L~eav~~~kPtvLIG~S~~~---g-----------~ft~evv~~Ma~~~erPIIF~LSNPt~~aE~~p 151 (255)
T PF03949_consen 98 LLEAVKGAKPTVLIGLSGQG---G-----------AFTEEVVRAMAKHNERPIIFPLSNPTPKAECTP 151 (255)
T ss_dssp HHHHHHCH--SEEEECSSST---T-----------SS-HHHHHHCHHHSSSEEEEE-SSSCGGSSS-H
T ss_pred HHHHHHhcCCCEEEEecCCC---C-----------cCCHHHHHHHhccCCCCEEEECCCCCCcccCCH
Confidence 89999999 9988887643 2 245788889999999999988999997 6653
No 341
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.056 Score=49.74 Aligned_cols=157 Identities=18% Similarity=0.170 Sum_probs=82.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---HHhh-------h
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---LEDA-------L 112 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l 112 (358)
..++.|+||+|.+|.+++..|+..|. +|++.+++. .+....++.... ..+..+.. -+| .+++ +
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGA--QVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999887 899999875 222223333221 12222111 112 2222 3
Q ss_pred CCCCEEEEcCCCCCCC---CCCH---HhHHHHHHHHHH----HHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCC
Q 018265 113 TGMDIVIIPAGVPRKP---GMTR---DDLFNINAGIVK----TLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~ 182 (358)
...|++|+.+|..... ..+. ...+..|+.... .+.+.+.+....+.+++++.-.... ..
T Consensus 85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~ 153 (253)
T PRK05867 85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHI-----------IN 153 (253)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcC-----------CC
Confidence 4789999999864321 1121 223345554433 4444444433335566554321110 11
Q ss_pred CCCC-cEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 183 YDPK-RLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 183 ~p~~-kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
.|.. -.++.+...-..+-+.+|+.+. +..|++..+
T Consensus 154 ~~~~~~~Y~asKaal~~~~~~la~e~~--~~gI~vn~i 189 (253)
T PRK05867 154 VPQQVSHYCASKAAVIHLTKAMAVELA--PHKIRVNSV 189 (253)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHHh--HhCeEEEEe
Confidence 1211 2355554444456677777663 344544443
No 342
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.46 E-value=0.0096 Score=55.22 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+.+++.|+||+|.+|.+++..|+..|. ++++.|.+.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~--~v~~~~~~~ 43 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA--NVVNADIHG 43 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 345899999999999999999999887 899999865
No 343
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=96.44 E-value=0.058 Score=53.16 Aligned_cols=123 Identities=19% Similarity=0.235 Sum_probs=72.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc------hhHH------HH--HhcCCCCCeEEEEeCCCcHHhhh
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT------PGVT------AD--ISHMDTNAVVRGFLGQQQLEDAL 112 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~------~g~~------~d--l~~~~~~~~v~~~~~t~d~~~al 112 (358)
++|+|||- |+||..+|..++..|. .++-+|+|+. .|.. .| +.......+++. |+|+ +.+
T Consensus 10 ~~I~ViGL-GYVGLPlA~~fA~~G~--~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lra---Ttd~-~~l 82 (436)
T COG0677 10 ATIGVIGL-GYVGLPLAAAFASAGF--KVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRA---TTDP-EEL 82 (436)
T ss_pred eEEEEEcc-ccccHHHHHHHHHcCC--ceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceE---ecCh-hhc
Confidence 79999998 9999999999999998 9999999871 1110 01 111111123443 5787 457
Q ss_pred CCCCEEEEcCCCCCCC-CCCHHhHHHHHHHHHHHHHHHHHhhCCCeE--EEEecCCCCccHHHHHHHHHHhCCC
Q 018265 113 TGMDIVIIPAGVPRKP-GMTRDDLFNINAGIVKTLCEGIAKCCPKAI--VNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~-g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~--viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
+.||++|++.-.|.+. .+..+ ..+.+-++.|.++-.++- |+=.|-|....-.++--.+...+|+
T Consensus 83 ~~~dv~iI~VPTPl~~~~~pDl-------s~v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~~plle~~sgL 149 (436)
T COG0677 83 KECDVFIICVPTPLKKYREPDL-------SYVESAARSIAPVLKKGDLVILESTTPPGTTEEVVKPLLEERSGL 149 (436)
T ss_pred ccCCEEEEEecCCcCCCCCCCh-------HHHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHHHHHhhcCCC
Confidence 8999999997766543 22233 333344444444443332 3333677766544432223333444
No 344
>PRK06196 oxidoreductase; Provisional
Probab=96.43 E-value=0.041 Score=52.69 Aligned_cols=115 Identities=19% Similarity=0.135 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHHhcCCC-CCeEEEEeCCCcHHhh-------hC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDT-NAVVRGFLGQQQLEDA-------LT 113 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~--g~~~dl~~~~~-~~~v~~~~~t~d~~~a-------l~ 113 (358)
.+.++|.|+||+|.+|.+++..|+..|. +|++++++... ....++..... ..++. ...+.+++ +.
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~--~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~---d~~~v~~~~~~~~~~~~ 98 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGA--HVIVPARRPDVAREALAGIDGVEVVMLDLA---DLESVRAFAERFLDSGR 98 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhCeEEEccCC---CHHHHHHHHHHHHhcCC
Confidence 3446899999999999999999999887 89999987521 11222221110 01111 01111121 24
Q ss_pred CCCEEEEcCCCCCCCC----CCHHhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecC
Q 018265 114 GMDIVIIPAGVPRKPG----MTRDDLFNINAG----IVKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g----~~r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 164 (358)
+.|++|+.+|....+. ..-...+..|.. +.+.+.+.+++.. .+.|+++|.
T Consensus 99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS 156 (315)
T PRK06196 99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSS 156 (315)
T ss_pred CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECC
Confidence 6899999998643221 112223444544 4566666665543 456776654
No 345
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.42 E-value=0.02 Score=54.22 Aligned_cols=101 Identities=23% Similarity=0.332 Sum_probs=70.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhC----CCC-----cEEEEEeCCC--ch------hHHHHHhcCCCCCeEEEEeCCCcH
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVN--TP------GVTADISHMDTNAVVRGFLGQQQL 108 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~----~~~-----~el~L~D~~~--~~------g~~~dl~~~~~~~~v~~~~~t~d~ 108 (358)
..||+|.|| |..|..++.+|... |+- ..++++|.+. .. .....+.+.. .. . ...++
T Consensus 25 d~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~-~~--~---~~~~L 97 (279)
T cd05312 25 DQRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD-EE--K---EGKSL 97 (279)
T ss_pred hcEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc-Cc--c---cCCCH
Confidence 469999999 99999999877654 652 5899999875 11 1111122111 11 1 13578
Q ss_pred HhhhC--CCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 018265 109 EDALT--GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (358)
Q Consensus 109 ~~al~--~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 167 (358)
.++++ ++|++|=+.+.+ | -+-+++.+.|.+++++.+|+-.|||..
T Consensus 98 ~e~i~~v~ptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~ 144 (279)
T cd05312 98 LEVVKAVKPTVLIGLSGVG---G-----------AFTEEVVRAMAKSNERPIIFALSNPTS 144 (279)
T ss_pred HHHHHhcCCCEEEEeCCCC---C-----------CCCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 99999 999988775533 2 234678888889999999998999986
No 346
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.41 E-value=0.024 Score=55.06 Aligned_cols=67 Identities=18% Similarity=0.180 Sum_probs=46.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
.+.+||+|||. |.+|.+++..|...|. +++..+.+..... +...... +.. .+..+++++||+|+++.
T Consensus 15 L~gktIgIIG~-GsmG~AlA~~L~~sG~--~Vvv~~r~~~~s~--~~A~~~G---~~~----~s~~eaa~~ADVVvLaV 81 (330)
T PRK05479 15 IKGKKVAIIGY-GSQGHAHALNLRDSGV--DVVVGLREGSKSW--KKAEADG---FEV----LTVAEAAKWADVIMILL 81 (330)
T ss_pred hCCCEEEEEee-HHHHHHHHHHHHHCCC--EEEEEECCchhhH--HHHHHCC---Cee----CCHHHHHhcCCEEEEcC
Confidence 45579999998 9999999999999887 8887776532111 1111111 111 25678999999999984
No 347
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.018 Score=52.31 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=30.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
||+.|+||+|.+|++++..|+..|. ++++++++.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~--~v~~~~r~~ 34 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH--KVTLVGARR 34 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 5899999999999999999998887 899998865
No 348
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.022 Score=52.52 Aligned_cols=36 Identities=19% Similarity=0.246 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+..+|.|+||+|.+|.+++..++..|. +++++|++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~--~v~~~~r~~ 41 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA--TVVVGDIDP 41 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCH
Confidence 446899999999999999999999887 899999875
No 349
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.39 E-value=0.095 Score=48.70 Aligned_cols=32 Identities=25% Similarity=0.227 Sum_probs=27.9
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVV 81 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~ 81 (358)
.+.|+||+|.+|++++..|+..|. +|++.+.+
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~--~V~~~~~~ 34 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGY--RVVLHYHR 34 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCC--eEEEEcCC
Confidence 689999999999999999999887 88887543
No 350
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.38 E-value=0.029 Score=51.93 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+..++.|+||+|.+|++++..|+..|. +|+++|++.
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 40 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA--RVAVLERSA 40 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 345899999999999999999999887 899999875
No 351
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.38 E-value=0.019 Score=54.54 Aligned_cols=68 Identities=24% Similarity=0.308 Sum_probs=42.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhH-HHHHhcCCCCCeEEEEeCCCc-HHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTNAVVRGFLGQQQ-LEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~-~~dl~~~~~~~~v~~~~~t~d-~~~al~~aDiVIi~a 122 (358)
.+||+|+|. |.+|..++..|...++ .+..++.+...+. .....-..... .+.+ ..++.++||+||++.
T Consensus 3 ~~~v~IvG~-GliG~s~a~~l~~~g~--~v~i~g~d~~~~~~~~a~~lgv~d~------~~~~~~~~~~~~aD~Vivav 72 (279)
T COG0287 3 SMKVGIVGL-GLMGGSLARALKEAGL--VVRIIGRDRSAATLKAALELGVIDE------LTVAGLAEAAAEADLVIVAV 72 (279)
T ss_pred CcEEEEECC-chHHHHHHHHHHHcCC--eEEEEeecCcHHHHHHHhhcCcccc------cccchhhhhcccCCEEEEec
Confidence 579999998 9999999999999998 5555555441111 11111000000 0112 257789999999984
No 352
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.38 E-value=0.05 Score=51.99 Aligned_cols=79 Identities=29% Similarity=0.385 Sum_probs=49.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEeC-CCc---HHhh-----
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFLG-QQQ---LEDA----- 111 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~a----- 111 (358)
.+.+++.|+||+|.+|..++..|+..|. .+++.|... ....+.++.... ..+..+.. -+| .++.
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga--~Vv~~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAAG--AKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCchhHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHH
Confidence 3446899999999999999999999887 899998754 222223333211 22222111 112 2222
Q ss_pred -hCCCCEEEEcCCCCC
Q 018265 112 -LTGMDIVIIPAGVPR 126 (358)
Q Consensus 112 -l~~aDiVIi~ag~~~ 126 (358)
+...|++|+.+|...
T Consensus 86 ~~g~iD~li~nAG~~~ 101 (306)
T PRK07792 86 GLGGLDIVVNNAGITR 101 (306)
T ss_pred HhCCCCEEEECCCCCC
Confidence 235899999999754
No 353
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=96.37 E-value=0.029 Score=52.80 Aligned_cols=69 Identities=14% Similarity=0.284 Sum_probs=45.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~-~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
+|||+|||. |.+|..++..+...+ ...-+.++|.+.. .+.++.+. .. ... .+|+++.+.++|+|++++.
T Consensus 1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~--~a~~~a~~-~~--~~~---~~~~~ell~~~DvVvi~a~ 70 (265)
T PRK13304 1 MLKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLE--KAENLASK-TG--AKA---CLSIDELVEDVDLVVECAS 70 (265)
T ss_pred CCEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHH--HHHHHHHh-cC--Cee---ECCHHHHhcCCCEEEEcCC
Confidence 479999998 999999998887754 2223567887642 12222221 11 122 2467777799999999863
No 354
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.16 Score=46.18 Aligned_cols=156 Identities=15% Similarity=0.125 Sum_probs=80.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCe-EEE-EeCCCcHHhhh-------CCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAV-VRG-FLGQQQLEDAL-------TGM 115 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~-v~~-~~~t~d~~~al-------~~a 115 (358)
.+.|+||+|.+|++++..|+..|. .+++.+.+. ......++........ +.. .+...++++++ ...
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERGY--AVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--eEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999998886 777777543 1111222322111111 111 11112223333 267
Q ss_pred CEEEEcCCCCCCC----CCCH---HhHHHHHHHHHHHHH----HHHHhhC--CCeEEEEecCCCCccHHHHHHHHHHhCC
Q 018265 116 DIVIIPAGVPRKP----GMTR---DDLFNINAGIVKTLC----EGIAKCC--PKAIVNLISNPVNSTVPIAAEVFKKVGT 182 (358)
Q Consensus 116 DiVIi~ag~~~~~----g~~r---~~~~~~N~~i~~~i~----~~i~~~~--p~a~viv~tNP~d~~t~~~~~~~~~~~~ 182 (358)
|+||+++|..... ..+. ...+..|+.....+. +.+.+.. .++.+++++...... +
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~ 149 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL------------G 149 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC------------C
Confidence 9999999864321 1121 233556666544444 3333221 235667666654222 1
Q ss_pred CCCC-cEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 183 YDPK-RLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 183 ~p~~-kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
.|.. -.++.+......+...+++.++ +..+++.++
T Consensus 150 ~~~~~~~Y~~sKaa~~~~~~~la~~~~--~~~i~v~~i 185 (248)
T PRK06123 150 SPGEYIDYAASKGAIDTMTIGLAKEVA--AEGIRVNAV 185 (248)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence 1211 1255554444456677777763 344554443
No 355
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.32 E-value=0.13 Score=48.94 Aligned_cols=120 Identities=18% Similarity=0.238 Sum_probs=78.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEE----eCCCcHH-------hhh
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGF----LGQQQLE-------DAL 112 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~----~~t~d~~-------~al 112 (358)
.+-|+|+||+.-+|.++|+.++..|. .++|+-... ++-...++.......++... +...+.+ .-+
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G~--~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRGA--KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC--ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 44799999999999999999999997 778887655 22222444443221112211 1112222 235
Q ss_pred CCCCEEEEcCCCCCCCCC-C------HHhHHHH----HHHHHHHHHHHHHhhCCCeEEEEecCCCCcc
Q 018265 113 TGMDIVIIPAGVPRKPGM-T------RDDLFNI----NAGIVKTLCEGIAKCCPKAIVNLISNPVNST 169 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~g~-~------r~~~~~~----N~~i~~~i~~~i~~~~p~a~viv~tNP~d~~ 169 (358)
.+.|+.|..||+.+ .+. + ....+.. .+-..+...+.+++.. ++.|+++++....+
T Consensus 90 g~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~ 155 (282)
T KOG1205|consen 90 GRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM 155 (282)
T ss_pred CCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc
Confidence 78999999999887 331 1 1223333 4678888999998877 79988888777665
No 356
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.32 E-value=0.017 Score=55.26 Aligned_cols=63 Identities=17% Similarity=0.318 Sum_probs=45.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||+|||. |.+|+.++..|+..|+ ++.++|++.. ..++.... ... ..+..++.++||+||++.
T Consensus 1 m~Ig~IGl-G~MG~~ma~~L~~~G~--~v~v~~~~~~---~~~~~~~g----~~~---~~s~~~~~~~advVi~~v 63 (292)
T PRK15059 1 MKLGFIGL-GIMGTPMAINLARAGH--QLHVTTIGPV---ADELLSLG----AVS---VETARQVTEASDIIFIMV 63 (292)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEeCCHh---HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 58999998 9999999999999987 8889998642 12232211 111 134567789999999984
No 357
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=96.26 E-value=0.033 Score=52.44 Aligned_cols=96 Identities=16% Similarity=0.219 Sum_probs=63.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~--~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
++||++||+ |++|.+++..|...+. ..+|...|.+... ..++.... ... . ++|..++...+|+||++.
T Consensus 1 ~~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~--~~~l~~~~-g~~--~---~~~~~~~~~~advv~Lav- 70 (266)
T COG0345 1 MMKIGFIGA-GNMGEAILSGLLKSGALPPEEIIVTNRSEEK--RAALAAEY-GVV--T---TTDNQEAVEEADVVFLAV- 70 (266)
T ss_pred CceEEEEcc-CHHHHHHHHHHHhcCCCCcceEEEeCCCHHH--HHHHHHHc-CCc--c---cCcHHHHHhhCCEEEEEe-
Confidence 479999998 9999999999998883 3588888876422 11333221 111 1 345578899999999985
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 166 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~ 166 (358)
|| ..+.++++.++...++..||-+.-.+
T Consensus 71 ---KP------------q~~~~vl~~l~~~~~~~lvISiaAGv 98 (266)
T COG0345 71 ---KP------------QDLEEVLSKLKPLTKDKLVISIAAGV 98 (266)
T ss_pred ---Ch------------HhHHHHHHHhhcccCCCEEEEEeCCC
Confidence 33 45667777777644565666555444
No 358
>PRK05599 hypothetical protein; Provisional
Probab=96.25 E-value=0.25 Score=45.36 Aligned_cols=153 Identities=12% Similarity=0.148 Sum_probs=83.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---H-------HhhhC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---L-------EDALT 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~-------~~al~ 113 (358)
|.+.|+||++.+|..++..|++ +. .+++.+++. ++....++..... ..+..+.. -+| . .+.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-GE--DVVLAARRPEAAQGLASDLRQRGA-TSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-CC--EEEEEeCCHHHHHHHHHHHHhccC-CceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 4589999999999999999984 64 899999865 3333344443211 11111110 011 1 12234
Q ss_pred CCCEEEEcCCCCCCCC---CCH---HhHHHHH----HHHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 114 GMDIVIIPAGVPRKPG---MTR---DDLFNIN----AGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 114 ~aDiVIi~ag~~~~~g---~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
.-|++|+.+|...... .+. .+....| ..+.+.+.+.+.+...++.|+++|.-.... +.
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------------~~ 144 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR------------AR 144 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc------------CC
Confidence 6899999988643211 111 1222223 333445556665544457777776654332 12
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceE
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVP 217 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~ 217 (358)
|..-.++.+.-....+...++..++ ...|++.
T Consensus 145 ~~~~~Y~asKaa~~~~~~~la~el~--~~~I~v~ 176 (246)
T PRK05599 145 RANYVYGSTKAGLDAFCQGLADSLH--GSHVRLI 176 (246)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHhc--CCCceEE
Confidence 2233566655444566777777764 3445443
No 359
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.075 Score=56.10 Aligned_cols=118 Identities=16% Similarity=0.160 Sum_probs=67.3
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe----CCCcHHhhhC--
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL----GQQQLEDALT-- 113 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~----~t~d~~~al~-- 113 (358)
...+.+++.|+||+|.+|.+++..|+..|. +|++++++. ......++.... ..+..+. ...+.+++++
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~ 442 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGA--TVFLVARNGEALDELVAEIRAKG--GTAHAYTCDLTDSAAVDHTVKDI 442 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence 344556899999999999999999999887 899999875 222222332211 1222211 1112233333
Q ss_pred -----CCCEEEEcCCCCCCCC--------CCHHhHHHHHHHHH----HHHHHHHHhhCCCeEEEEecC
Q 018265 114 -----GMDIVIIPAGVPRKPG--------MTRDDLFNINAGIV----KTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 114 -----~aDiVIi~ag~~~~~g--------~~r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 164 (358)
..|++|+.+|...... ++-...+..|+... +.+.+.+++. ..+.++++|.
T Consensus 443 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS 509 (657)
T PRK07201 443 LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVSS 509 (657)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEECC
Confidence 6899999998642111 01123345565544 4444444443 3456666654
No 360
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=96.25 E-value=0.047 Score=52.40 Aligned_cols=104 Identities=19% Similarity=0.131 Sum_probs=67.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---ch--hHHHHHhcCCCCCeEEEEeCC-CcHHhhh------C
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TP--GVTADISHMDTNAVVRGFLGQ-QQLEDAL------T 113 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~--g~~~dl~~~~~~~~v~~~~~t-~d~~~al------~ 113 (358)
..+|.|+||+|+||++.+..|+..|. +++.+|... .. ..+..+.+. ...+....+. .| .+++ .
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy--~v~~vDNl~n~~~~sl~r~~~l~~~--~~~v~f~~~Dl~D-~~~L~kvF~~~ 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY--GVVIVDNLNNSYLESLKRVRQLLGE--GKSVFFVEGDLND-AEALEKLFSEV 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC--cEEEEecccccchhHHHHHHHhcCC--CCceEEEEeccCC-HHHHHHHHhhc
Confidence 35899999999999999999999998 999999754 11 112222221 1223322111 12 2222 3
Q ss_pred CCCEEEEcCCCCC-CCC-CCHHhHHHHHHHHHHHHHHHHHhhC
Q 018265 114 GMDIVIIPAGVPR-KPG-MTRDDLFNINAGIVKTLCEGIAKCC 154 (358)
Q Consensus 114 ~aDiVIi~ag~~~-~~g-~~r~~~~~~N~~i~~~i~~~i~~~~ 154 (358)
.-|-|++.|+... .+. +....+...|+--...+.+.+++++
T Consensus 77 ~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~ 119 (343)
T KOG1371|consen 77 KFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN 119 (343)
T ss_pred CCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC
Confidence 4688999876432 111 2346667788888999999999887
No 361
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.24 E-value=0.056 Score=47.61 Aligned_cols=33 Identities=36% Similarity=0.578 Sum_probs=29.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
||+|+|+ |.+|+.++..|+..|+ .+++|+|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV-GNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 6899998 9999999999999886 4899999875
No 362
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.23 E-value=0.05 Score=49.39 Aligned_cols=114 Identities=15% Similarity=0.136 Sum_probs=62.6
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEeC-CCc---HHhh-------hCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFLG-QQQ---LEDA-------LTG 114 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l~~ 114 (358)
|.|+||+|.+|.+++..|++.|. ++++++... ......++.+.. .++..+.. -+| .+++ +..
T Consensus 1 vlItGas~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF--EICVHYHSGRSDAESVVSAIQAQG--GNARLLQFDVADRVACRTLLEADIAEHGA 76 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999887 788887543 122222333221 12222111 112 2222 234
Q ss_pred CCEEEEcCCCCCCCC---CC---HHhHHHHHHHHHHHHHHHH----HhhCCCeEEEEecCCC
Q 018265 115 MDIVIIPAGVPRKPG---MT---RDDLFNINAGIVKTLCEGI----AKCCPKAIVNLISNPV 166 (358)
Q Consensus 115 aDiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP~ 166 (358)
-|.+|..+|...... .+ -...+..|+.....+.+.+ .+..+.+.++++|...
T Consensus 77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~ 138 (239)
T TIGR01831 77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVS 138 (239)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchh
Confidence 588999888643221 12 2334556665544444432 2223456677766654
No 363
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.23 E-value=0.13 Score=46.86 Aligned_cols=114 Identities=17% Similarity=0.149 Sum_probs=60.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEe-CCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhh-------
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYD-VVNT--PGVTADISHMDTNAVVRGFL-GQQQ---LEDA------- 111 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D-~~~~--~g~~~dl~~~~~~~~v~~~~-~t~d---~~~a------- 111 (358)
.+.+.|+|++|.+|..++..|+..|. .+++.. .+.. .....++.... ..+..+. .-+| .+++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF--KVVAGCGPNSPRRVKWLEDQKALG--FDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34789999999999999999999886 777753 3221 11122222211 1111111 1122 2222
Q ss_pred hCCCCEEEEcCCCCCCC---CCC---HHhHHHHHHHHH----HHHHHHHHhhCCCeEEEEecC
Q 018265 112 LTGMDIVIIPAGVPRKP---GMT---RDDLFNINAGIV----KTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 164 (358)
+...|+||+++|..... ..+ -...+..|.... +.+.+.+.+. +.+.+++++.
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS 140 (246)
T PRK12938 79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISS 140 (246)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEec
Confidence 24689999999875321 111 223355565553 3444444332 3356666654
No 364
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.22 E-value=0.023 Score=54.26 Aligned_cols=97 Identities=23% Similarity=0.250 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~ 124 (358)
...||+|+|+ |.+|..++..|...|. +|.++|++... ......... ..+ ...++.+.++++|+||.+...
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~--~V~v~~R~~~~--~~~~~~~g~----~~~-~~~~l~~~l~~aDiVint~P~ 219 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGA--RVFVGARSSAD--LARITEMGL----IPF-PLNKLEEKVAEIDIVINTIPA 219 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHCCC----eee-cHHHHHHHhccCCEEEECCCh
Confidence 3458999998 9999999999988886 89999986521 111111111 111 123567888999999998521
Q ss_pred CCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEe-cCCCCcc
Q 018265 125 PRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI-SNPVNST 169 (358)
Q Consensus 125 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNP~d~~ 169 (358)
. ++ + .+ .+....|+++++.+ ++|-.+-
T Consensus 220 ~---------ii--~----~~---~l~~~k~~aliIDlas~Pg~td 247 (287)
T TIGR02853 220 L---------VL--T----AD---VLSKLPKHAVIIDLASKPGGTD 247 (287)
T ss_pred H---------Hh--C----HH---HHhcCCCCeEEEEeCcCCCCCC
Confidence 1 11 1 12 22333467888877 5887654
No 365
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.056 Score=48.86 Aligned_cols=35 Identities=23% Similarity=0.137 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
.++|.|+||+|.+|+.++..|+..|. ++++++++.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~--~v~~~~r~~ 37 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH--QVIGIARSA 37 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 45899999999999999999999887 899998865
No 366
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=96.22 E-value=0.037 Score=59.54 Aligned_cols=67 Identities=22% Similarity=0.424 Sum_probs=47.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
.||+|||+ |.+|..++..+...++..+|..+|.+... ..+.+ ... ... ..+++.++++++|+||++.
T Consensus 4 ~~I~IIG~-G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~---~g~--~~~---~~~~~~~~~~~aDvVilav 71 (735)
T PRK14806 4 GRVVVIGL-GLIGGSFAKALRERGLAREVVAVDRRAKSLELAVS---LGV--IDR---GEEDLAEAVSGADVIVLAV 71 (735)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHH---CCC--CCc---ccCCHHHHhcCCCEEEECC
Confidence 58999998 99999999999988754479999987522 11221 111 000 1346678899999999985
No 367
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.062 Score=48.91 Aligned_cols=35 Identities=23% Similarity=0.244 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
++++.|+|++|.+|..++..|+.+|. .|+++|++.
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~ 40 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGW--DLALVARSQ 40 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 35899999999999999999999887 899999875
No 368
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.21 E-value=0.049 Score=54.75 Aligned_cols=132 Identities=19% Similarity=0.131 Sum_probs=79.4
Q ss_pred cchhhHHHHHHHhh--cCCCcccc--ccccccccccccC----------C-CCCCCCCEEEEEcCCCchHHHHHHHHHhC
Q 018265 5 TSGANQRIARIAAH--LHPPTLQI--EGESSGLGRMDCR----------A-KGGSPGFKVAVLGAAGGIGQPLAMLMKIN 69 (358)
Q Consensus 5 ~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~----------~-~~~~~~~KI~IiGa~G~vG~~~a~~l~~~ 69 (358)
|.+--+|+.+++.. |.=|.+-+ +-..++|-..-+. . .......+|+|+|. |.+|..++..+...
T Consensus 156 TttGv~rl~~~~~~~~l~~Pv~~vn~s~~K~~~dn~~gt~~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~ 234 (425)
T PRK05476 156 TTTGVHRLYAMAKDGALKFPAINVNDSVTKSKFDNRYGTGESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGL 234 (425)
T ss_pred chHHHHHHHHHHHcCCCCCCEEecCCcccCccccccHHHHhhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhC
Confidence 56667888888664 66676654 2333343322111 1 11235569999998 99999999999888
Q ss_pred CCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHH
Q 018265 70 PLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEG 149 (358)
Q Consensus 70 ~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~ 149 (358)
|. +|+.+|++..+.... ..+. .. . .+++++++++|+||.+.|.+ .++.. +.
T Consensus 235 Ga--~ViV~d~dp~ra~~A-~~~G---~~--v----~~l~eal~~aDVVI~aTG~~---------------~vI~~--~~ 285 (425)
T PRK05476 235 GA--RVIVTEVDPICALQA-AMDG---FR--V----MTMEEAAELGDIFVTATGNK---------------DVITA--EH 285 (425)
T ss_pred CC--EEEEEcCCchhhHHH-HhcC---CE--e----cCHHHHHhCCCEEEECCCCH---------------HHHHH--HH
Confidence 87 899999886322111 0111 11 1 13578899999999875421 22221 12
Q ss_pred HHhhCCCeEEEEecCCC
Q 018265 150 IAKCCPKAIVNLISNPV 166 (358)
Q Consensus 150 i~~~~p~a~viv~tNP~ 166 (358)
+....+.+++++++-+-
T Consensus 286 ~~~mK~GailiNvG~~d 302 (425)
T PRK05476 286 MEAMKDGAILANIGHFD 302 (425)
T ss_pred HhcCCCCCEEEEcCCCC
Confidence 22233678999987543
No 369
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.21 E-value=0.046 Score=49.79 Aligned_cols=36 Identities=31% Similarity=0.445 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+..||+|+|+ |.+|+.++..|+..|+ .++.|+|.+.
T Consensus 27 ~~~~V~ViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ 62 (212)
T PRK08644 27 KKAKVGIAGA-GGLGSNIAVALARSGV-GNLKLVDFDV 62 (212)
T ss_pred hCCCEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 3458999998 9999999999999887 4899999883
No 370
>PLN02712 arogenate dehydrogenase
Probab=96.19 E-value=0.039 Score=58.65 Aligned_cols=68 Identities=18% Similarity=0.252 Sum_probs=47.5
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhC-CCCEEEE
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALT-GMDIVII 120 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~-~aDiVIi 120 (358)
.+.++|||+|||. |.+|..++..|...|. +|+.+|.+.....+.++ . +.. .+++++.+. ++|+||+
T Consensus 365 ~~~~~~kIgIIGl-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~a~~~---G----v~~---~~~~~el~~~~aDvVIL 431 (667)
T PLN02712 365 NDGSKLKIAIVGF-GNFGQFLAKTMVKQGH--TVLAYSRSDYSDEAQKL---G----VSY---FSDADDLCEEHPEVILL 431 (667)
T ss_pred CCCCCCEEEEEec-CHHHHHHHHHHHHCcC--EEEEEECChHHHHHHHc---C----CeE---eCCHHHHHhcCCCEEEE
Confidence 4456789999998 9999999999988776 89999987421111111 1 112 245666665 5999999
Q ss_pred cC
Q 018265 121 PA 122 (358)
Q Consensus 121 ~a 122 (358)
+.
T Consensus 432 av 433 (667)
T PLN02712 432 CT 433 (667)
T ss_pred CC
Confidence 84
No 371
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.18 E-value=0.11 Score=48.49 Aligned_cols=160 Identities=14% Similarity=0.180 Sum_probs=83.0
Q ss_pred CCCEEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCe-EEE-EeCCCcHHhh-------h
Q 018265 45 PGFKVAVLGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAV-VRG-FLGQQQLEDA-------L 112 (358)
Q Consensus 45 ~~~KI~IiGa~G--~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~-v~~-~~~t~d~~~a-------l 112 (358)
+.+.+.|+||++ .+|..++..|++.|. .|++.|.+. ......++........ +.. .+...+.+.+ +
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~--~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC--EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 345789999953 699999999999887 888888764 2223333332111011 100 0001112211 2
Q ss_pred CCCCEEEEcCCCCCCC--------CCCHH---hHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 113 TGMDIVIIPAGVPRKP--------GMTRD---DLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~--------g~~r~---~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
-..|++|+.+|..... ..+.. ..+..|+.....+.+.+... .+.+.|+++|.-....
T Consensus 83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~----------- 151 (262)
T PRK07984 83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----------- 151 (262)
T ss_pred CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-----------
Confidence 3479999999864211 11222 22344544333333333221 2356777766432211
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.|..-.|+.+...-..+-+.+|..++ +..|++..+-
T Consensus 152 -~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~i~ 188 (262)
T PRK07984 152 -AIPNYNVMGLAKASLEANVRYMANAMG--PEGVRVNAIS 188 (262)
T ss_pred -CCCCcchhHHHHHHHHHHHHHHHHHhc--ccCcEEeeee
Confidence 123333566665555667788888774 4556555444
No 372
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=96.17 E-value=0.022 Score=58.01 Aligned_cols=102 Identities=14% Similarity=0.182 Sum_probs=60.1
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcC-CCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPR 126 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~-~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~ 126 (358)
+|+|||. |.+|.+++..|+..|. +|.++|++..+ +.++... .....+.......++.++++++|+||++.-
T Consensus 1 ~IG~IGL-G~MG~~mA~nL~~~G~--~V~v~drt~~~--~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~--- 72 (467)
T TIGR00873 1 DIGVIGL-AVMGSNLALNMADHGF--TVSVYNRTPEK--TDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVK--- 72 (467)
T ss_pred CEEEEee-HHHHHHHHHHHHhcCC--eEEEEeCCHHH--HHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECC---
Confidence 4899998 9999999999999998 99999987522 2223321 001112222111233334568999888742
Q ss_pred CCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecC--CCCcc
Q 018265 127 KPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISN--PVNST 169 (358)
Q Consensus 127 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN--P~d~~ 169 (358)
+| +.+.++.+.+..+- ++.+||..+| |.+..
T Consensus 73 -~~-----------~~v~~Vi~~l~~~L~~g~iIID~gns~~~~t~ 106 (467)
T TIGR00873 73 -AG-----------APVDAVINQLLPLLEKGDIIIDGGNSHYPDTE 106 (467)
T ss_pred -Cc-----------HHHHHHHHHHHhhCCCCCEEEECCCcCHHHHH
Confidence 11 22333444454443 6677888876 44433
No 373
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.11 Score=48.23 Aligned_cols=116 Identities=14% Similarity=0.127 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEeCCCc---hhHHHHHhcCCCCCeEEEEe----CCCcHHhhh----
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT---PGVTADISHMDTNAVVRGFL----GQQQLEDAL---- 112 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~-~~~el~L~D~~~~---~g~~~dl~~~~~~~~v~~~~----~t~d~~~al---- 112 (358)
+.++|.|+||+|.+|.+++..++..+ . .|++++++.. .....++.... ...+..+. ...+.++.+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~--~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA--RVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC--eEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHH
Confidence 34589999999999999999998874 5 8899988752 22233443321 11222211 111211112
Q ss_pred --CCCCEEEEcCCCCCCCCC---CH---HhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecC
Q 018265 113 --TGMDIVIIPAGVPRKPGM---TR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 113 --~~aDiVIi~ag~~~~~g~---~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 164 (358)
.+.|++|+.+|....... +. .+.+..|+. +.+.+.+.+.+.. .+.++++|.
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS 146 (253)
T PRK07904 84 AGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSS 146 (253)
T ss_pred hcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEec
Confidence 379999998876532111 11 123556654 3345666666554 355666554
No 374
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.15 E-value=0.024 Score=53.25 Aligned_cols=33 Identities=12% Similarity=0.245 Sum_probs=29.5
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
||.|+||+|++|++++..|+..+. ++..+.++.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~--~V~~~~R~~ 33 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV--PFLVASRSS 33 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC--cEEEEeCCC
Confidence 589999999999999999998887 888888765
No 375
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.15 E-value=0.054 Score=49.83 Aligned_cols=100 Identities=23% Similarity=0.321 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEeCCC----chh-----HHHHHhcCCCCCeEEEEeCCCcHHhhhCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVN----TPG-----VTADISHMDTNAVVRGFLGQQQLEDALTG 114 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~-~~el~L~D~~~----~~g-----~~~dl~~~~~~~~v~~~~~t~d~~~al~~ 114 (358)
+..||+|+|| |..|..++..|...|. .++|.++|++. ... ...++.+...... . ..++.+++++
T Consensus 24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~---~--~~~l~~~l~~ 97 (226)
T cd05311 24 EEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK---T--GGTLKEALKG 97 (226)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc---c--cCCHHHHHhc
Confidence 3469999999 9999999999988775 23799999983 111 1122221110011 1 1256788999
Q ss_pred CCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCCc
Q 018265 115 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNS 168 (358)
Q Consensus 115 aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d~ 168 (358)
+|+||.+.+ +|+- + .+..+.+ +++.+++..+||...
T Consensus 98 ~dvlIgaT~----~G~~-------~----~~~l~~m---~~~~ivf~lsnP~~e 133 (226)
T cd05311 98 ADVFIGVSR----PGVV-------K----KEMIKKM---AKDPIVFALANPVPE 133 (226)
T ss_pred CCEEEeCCC----CCCC-------C----HHHHHhh---CCCCEEEEeCCCCCc
Confidence 999999764 2431 1 2333333 366777777899753
No 376
>PLN02494 adenosylhomocysteinase
Probab=96.15 E-value=0.06 Score=54.56 Aligned_cols=133 Identities=19% Similarity=0.175 Sum_probs=82.8
Q ss_pred CcchhhHHHHHHHhh--cCCCcccccc--cccccccccc-----------CCCCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 018265 4 PTSGANQRIARIAAH--LHPPTLQIEG--ESSGLGRMDC-----------RAKGGSPGFKVAVLGAAGGIGQPLAMLMKI 68 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~-----------~~~~~~~~~KI~IiGa~G~vG~~~a~~l~~ 68 (358)
-|.+--+|+.+++.. |.-|.+-+.- ....|-.+-. .---.....+|+|+|. |.+|..++..+..
T Consensus 197 eTttGv~Rl~~m~~~g~L~~Pvi~vnds~~K~~fDn~yGtgqS~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka 275 (477)
T PLN02494 197 ETTTGVKRLYQMQKNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKA 275 (477)
T ss_pred cccHHHHHHHHHHHCCCCCCCEEEEcChhhhhhhhccccccccHHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHH
Confidence 467778999998765 8888776622 2222322111 1011134569999998 9999999999987
Q ss_pred CCCCcEEEEEeCCCch-hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHH
Q 018265 69 NPLVSVLHLYDVVNTP-GVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLC 147 (358)
Q Consensus 69 ~~~~~el~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~ 147 (358)
.|. .|+.+|++... ..+. .+. + . . .+++++++++|+||.+.|.. .++. .
T Consensus 276 ~Ga--~VIV~e~dp~r~~eA~--~~G-~--~--v----v~leEal~~ADVVI~tTGt~---------------~vI~--~ 325 (477)
T PLN02494 276 AGA--RVIVTEIDPICALQAL--MEG-Y--Q--V----LTLEDVVSEADIFVTTTGNK---------------DIIM--V 325 (477)
T ss_pred CCC--EEEEEeCCchhhHHHH--hcC-C--e--e----ccHHHHHhhCCEEEECCCCc---------------cchH--H
Confidence 776 89999987622 2222 111 1 1 1 13568899999999875532 1110 1
Q ss_pred HHHHhhCCCeEEEEecCCCC
Q 018265 148 EGIAKCCPKAIVNLISNPVN 167 (358)
Q Consensus 148 ~~i~~~~p~a~viv~tNP~d 167 (358)
+.+....|.++++|++-+-+
T Consensus 326 e~L~~MK~GAiLiNvGr~~~ 345 (477)
T PLN02494 326 DHMRKMKNNAIVCNIGHFDN 345 (477)
T ss_pred HHHhcCCCCCEEEEcCCCCC
Confidence 23333447899999987643
No 377
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.15 E-value=0.021 Score=52.05 Aligned_cols=93 Identities=16% Similarity=0.199 Sum_probs=57.9
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCCEEEEcCCCCCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALTGMDIVIIPAGVPRK 127 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~~aDiVIi~ag~~~~ 127 (358)
|+|+||+|.+|+.++..|+..+. +|..+=++........|.+... ..+.. +....++.++|+|+|.||++.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~--~V~~l~R~~~~~~~~~l~~~g~-~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~- 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF--SVRALVRDPSSDRAQQLQALGA-EVVEADYDDPESLVAALKGVDAVFSVTPPSH- 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG--CEEEEESSSHHHHHHHHHHTTT-EEEES-TT-HHHHHHHHTTCSEEEEESSCSC-
T ss_pred CEEECCccHHHHHHHHHHHhCCC--CcEEEEeccchhhhhhhhcccc-eEeecccCCHHHHHHHHcCCceEEeecCcch-
Confidence 78999999999999999999765 6777665542223334444321 11211 0111456778999999999865332
Q ss_pred CCCCHHhHHHHHHHHHHHHHHHHHhhC
Q 018265 128 PGMTRDDLFNINAGIVKTLCEGIAKCC 154 (358)
Q Consensus 128 ~g~~r~~~~~~N~~i~~~i~~~i~~~~ 154 (358)
.. -.+....++++..+.+
T Consensus 77 --~~-------~~~~~~~li~Aa~~ag 94 (233)
T PF05368_consen 77 --PS-------ELEQQKNLIDAAKAAG 94 (233)
T ss_dssp --CC-------HHHHHHHHHHHHHHHT
T ss_pred --hh-------hhhhhhhHHHhhhccc
Confidence 11 1344556666776665
No 378
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.072 Score=49.15 Aligned_cols=113 Identities=14% Similarity=0.153 Sum_probs=62.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh-------
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTNAVVRGFL-GQQQ---LEDAL------- 112 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~---~~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al------- 112 (358)
+++.|+||+|.+|++++..|...+. .+++.+... ......++.... ..+..+. .-+| ..+++
T Consensus 10 k~vlItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 10 RAALVTGAARRIGRAIALDLAAHGF--DVAVHYNRSRDEAEALAAEIRALG--RRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999998886 777776543 111222222211 2222211 1122 22233
Q ss_pred CCCCEEEEcCCCCCCC---CCC---HHhHHHHHHHHHHHHHHHHHhhC---CCeEEEEec
Q 018265 113 TGMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKCC---PKAIVNLIS 163 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~t 163 (358)
...|+||+++|..... ..+ -...+..|+.-...+++.+..+. ..+.+++++
T Consensus 86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~ 145 (258)
T PRK09134 86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMI 145 (258)
T ss_pred CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEEC
Confidence 3469999999864321 112 22345667665555555554432 234555543
No 379
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.09 E-value=0.0045 Score=57.67 Aligned_cols=121 Identities=19% Similarity=0.228 Sum_probs=78.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCC----C-----CcEEEEEeCCCc--hh------HHHHHhcCCCCCeEEEEeCCCcH
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINP----L-----VSVLHLYDVVNT--PG------VTADISHMDTNAVVRGFLGQQQL 108 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~----~-----~~el~L~D~~~~--~g------~~~dl~~~~~~~~v~~~~~t~d~ 108 (358)
..||+|.|| |..|-.++.+|...+ + ...++++|...+ .+ ....+.+.. .. -. ...|+
T Consensus 25 d~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~-~~-~~---~~~~L 98 (254)
T cd00762 25 EHKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFA-NP-ER---ESGDL 98 (254)
T ss_pred hcEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHc-Cc-cc---ccCCH
Confidence 469999999 999999998886543 2 148999998751 11 011111010 11 11 12578
Q ss_pred HhhhC--CCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC--ccHHHHHHHHHHhCCCC
Q 018265 109 EDALT--GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN--STVPIAAEVFKKVGTYD 184 (358)
Q Consensus 109 ~~al~--~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d--~~t~~~~~~~~~~~~~p 184 (358)
.++++ ++|++|=+.+.+ | -+.+++.+.|.+++++.+|+=.|||.. -.++ +-.++.+ +
T Consensus 99 ~eav~~~kptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tp---e~a~~~t--~ 159 (254)
T cd00762 99 EDAVEAAKPDFLIGVSRVG---G-----------AFTPEVIRAXAEINERPVIFALSNPTSKAECTA---EEAYTAT--E 159 (254)
T ss_pred HHHHHhhCCCEEEEeCCCC---C-----------CCCHHHHHHHhhcCCCCEEEECCCcCCccccCH---HHHHhhc--C
Confidence 99999 999988776544 2 244678888888999999988899996 4443 2234433 1
Q ss_pred CCcEEEe
Q 018265 185 PKRLLGV 191 (358)
Q Consensus 185 ~~kviG~ 191 (358)
-+.+++.
T Consensus 160 G~ai~At 166 (254)
T cd00762 160 GRAIFAS 166 (254)
T ss_pred CCEEEEE
Confidence 2467777
No 380
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.07 E-value=0.062 Score=45.37 Aligned_cols=33 Identities=24% Similarity=0.498 Sum_probs=29.7
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv-~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV-GKITLIDFDT 33 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC-CEEEEEcCCC
Confidence 6899998 9999999999999887 4899999874
No 381
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.07 E-value=0.089 Score=52.71 Aligned_cols=131 Identities=18% Similarity=0.148 Sum_probs=80.1
Q ss_pred CcchhhHHHHHHHhh--cCCCcccccc--ccccccccccC-----------CCCCCCCCEEEEEcCCCchHHHHHHHHHh
Q 018265 4 PTSGANQRIARIAAH--LHPPTLQIEG--ESSGLGRMDCR-----------AKGGSPGFKVAVLGAAGGIGQPLAMLMKI 68 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~-----------~~~~~~~~KI~IiGa~G~vG~~~a~~l~~ 68 (358)
-|.+--+|+.+++.+ |.=|.+-+.- -..+|-.+-++ -.......+|+|+|+ |.+|..++..+..
T Consensus 145 eTttGv~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~g~s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~ 223 (413)
T cd00401 145 ETTTGVHRLYKMEKEGKLKFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRG 223 (413)
T ss_pred cchHHHHHHHHHHHCCCCCCCEEEecchhhcccccccchhchhhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHH
Confidence 366677899888765 7667665522 22233322110 011234569999998 9999999999988
Q ss_pred CCCCcEEEEEeCCCch-hHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHH
Q 018265 69 NPLVSVLHLYDVVNTP-GVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLC 147 (358)
Q Consensus 69 ~~~~~el~L~D~~~~~-g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~ 147 (358)
.|. .++.+|+++.+ ..+.++ . . .. .+.+++++++|+||.+.|.+ .++..
T Consensus 224 ~Ga--~ViV~d~d~~R~~~A~~~--G---~--~~----~~~~e~v~~aDVVI~atG~~---------------~~i~~-- 273 (413)
T cd00401 224 QGA--RVIVTEVDPICALQAAME--G---Y--EV----MTMEEAVKEGDIFVTTTGNK---------------DIITG-- 273 (413)
T ss_pred CCC--EEEEEECChhhHHHHHhc--C---C--EE----ccHHHHHcCCCEEEECCCCH---------------HHHHH--
Confidence 887 78889987622 222221 1 1 11 12467889999999986532 22221
Q ss_pred HHHHhhCCCeEEEEecCC
Q 018265 148 EGIAKCCPKAIVNLISNP 165 (358)
Q Consensus 148 ~~i~~~~p~a~viv~tNP 165 (358)
..+....|.+++++++.+
T Consensus 274 ~~l~~mk~GgilvnvG~~ 291 (413)
T cd00401 274 EHFEQMKDGAIVCNIGHF 291 (413)
T ss_pred HHHhcCCCCcEEEEeCCC
Confidence 113333478899999865
No 382
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.06 E-value=0.034 Score=54.16 Aligned_cols=65 Identities=29% Similarity=0.392 Sum_probs=45.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
...++|+|||. |.+|+.++..|+. +..-+|..+|...... ... .+. ...++++++++||+|++..
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~-~~g~~V~~~d~~~~~~----~~~-----~~~---~~~~l~ell~~aDvIvl~l 208 (332)
T PRK08605 144 IKDLKVAVIGT-GRIGLAVAKIFAK-GYGSDVVAYDPFPNAK----AAT-----YVD---YKDTIEEAVEGADIVTLHM 208 (332)
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHh-cCCCEEEEECCCccHh----HHh-----hcc---ccCCHHHHHHhCCEEEEeC
Confidence 34568999998 9999999999853 3323899999754211 111 011 1246889999999999985
No 383
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=96.06 E-value=0.076 Score=53.06 Aligned_cols=132 Identities=22% Similarity=0.176 Sum_probs=79.3
Q ss_pred CcchhhHHHHHHHhh--cCCCccccccc--cccccccccC----------CCC-CCCCCEEEEEcCCCchHHHHHHHHHh
Q 018265 4 PTSGANQRIARIAAH--LHPPTLQIEGE--SSGLGRMDCR----------AKG-GSPGFKVAVLGAAGGIGQPLAMLMKI 68 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~----------~~~-~~~~~KI~IiGa~G~vG~~~a~~l~~ 68 (358)
-|.+--+|+.+++.. |.=|.+-+.-+ ..+|-.+-+. ..+ .....+|+|+|. |.+|..++..+..
T Consensus 138 eTttGv~rl~~~~~~~~L~~Pvi~vnds~~K~~fDn~yg~g~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~ 216 (406)
T TIGR00936 138 ETTTGVIRLRAMEAEGVLKFPAINVNDAYTKSLFDNRYGTGQSTIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARG 216 (406)
T ss_pred cchHHHHHHHHHHHcCCCCCcEEEecchhhchhhhcccccchhHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhh
Confidence 367778899988754 77777655222 2222211111 111 245569999998 9999999999987
Q ss_pred CCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHH
Q 018265 69 NPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCE 148 (358)
Q Consensus 69 ~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~ 148 (358)
.|. +++.+|+++.+.... ..+. . .. .+.+++++++|+||.+.|. ..++.. +
T Consensus 217 ~Ga--~ViV~d~dp~r~~~A-~~~G---~--~v----~~leeal~~aDVVItaTG~---------------~~vI~~--~ 267 (406)
T TIGR00936 217 MGA--RVIVTEVDPIRALEA-AMDG---F--RV----MTMEEAAKIGDIFITATGN---------------KDVIRG--E 267 (406)
T ss_pred CcC--EEEEEeCChhhHHHH-HhcC---C--Ee----CCHHHHHhcCCEEEECCCC---------------HHHHHH--H
Confidence 776 899999876321111 1111 1 11 1346789999999887542 222222 1
Q ss_pred HHHhhCCCeEEEEecCC
Q 018265 149 GIAKCCPKAIVNLISNP 165 (358)
Q Consensus 149 ~i~~~~p~a~viv~tNP 165 (358)
.+....+.+++++++-+
T Consensus 268 ~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 268 HFENMKDGAIVANIGHF 284 (406)
T ss_pred HHhcCCCCcEEEEECCC
Confidence 22223367888887654
No 384
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.05 E-value=0.16 Score=45.96 Aligned_cols=114 Identities=22% Similarity=0.166 Sum_probs=63.2
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcC--CCCCeEEEEeC-CCc---HHhhh-------CC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTNAVVRGFLG-QQQ---LEDAL-------TG 114 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~--~~~~~v~~~~~-t~d---~~~al-------~~ 114 (358)
+|.|+|++|.+|++++..|...|. .+++.|++.. ....++... .....+..+.. -+| .++++ ..
T Consensus 4 ~vlItG~s~~iG~~la~~l~~~g~--~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 4 IALVTGAKRGIGSAIARELLNDGY--RVIATYFSGN-DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred EEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCcH-HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 789999999999999999998886 8899988742 111111110 01112222211 122 22222 35
Q ss_pred CCEEEEcCCCCCCC---CCC---HHhHHHHHHHHHHHH----HHHHHhhCCCeEEEEecCC
Q 018265 115 MDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTL----CEGIAKCCPKAIVNLISNP 165 (358)
Q Consensus 115 aDiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tNP 165 (358)
.|++|+.+|..... ..+ -...+..|+.....+ .+.+++. +.+.+++++..
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~ 140 (245)
T PRK12824 81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSV 140 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECCh
Confidence 89999998864211 111 122345555554444 4444443 34577776653
No 385
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.22 Score=45.76 Aligned_cols=146 Identities=11% Similarity=0.049 Sum_probs=78.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeC-CCc---HHhh-------hC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLG-QQQ---LEDA-------LT 113 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l~ 113 (358)
+++.|+||+|.+|.+++..|+..|. .|+++|.+. ......++.... ..+..+.. -+| .+++ +.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA--NVVITGRTKEKLEEAKLEIEQFP--GQVLTVQMDVRNPEDVQKMVEQIDEKFG 77 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999887 899999875 222222333211 12222111 122 2221 24
Q ss_pred CCCEEEEcCCCCCC-C--CCCH---HhHHHHHHHHHHHHHHHH----HhhCCCeEEEEecCCCCccHHHHHHHHHHhCCC
Q 018265 114 GMDIVIIPAGVPRK-P--GMTR---DDLFNINAGIVKTLCEGI----AKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTY 183 (358)
Q Consensus 114 ~aDiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP~d~~t~~~~~~~~~~~~~ 183 (358)
..|+||+.+|.... + ..+. ...+..|+.....+.+.+ .+....+.++++|.-.... ..
T Consensus 78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~ 145 (252)
T PRK07677 78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD------------AG 145 (252)
T ss_pred CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc------------CC
Confidence 67999999875321 1 2222 223455554444444444 3333456777766332111 11
Q ss_pred CCCcEEEeeeccHHHHHHHHHHHhC
Q 018265 184 DPKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 184 p~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
+..-.++.+......+.+.+|..+.
T Consensus 146 ~~~~~Y~~sKaa~~~~~~~la~e~~ 170 (252)
T PRK07677 146 PGVIHSAAAKAGVLAMTRTLAVEWG 170 (252)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhC
Confidence 1112344444444456677777764
No 386
>PLN02928 oxidoreductase family protein
Probab=96.04 E-value=0.036 Score=54.35 Aligned_cols=104 Identities=23% Similarity=0.197 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHH--hcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADI--SHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl--~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
....+|+|+|. |.||+.++..+..-|. +|..+|..........+ ................++++.++.||+|++.
T Consensus 157 l~gktvGIiG~-G~IG~~vA~~l~afG~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 157 LFGKTVFILGY-GAIGIELAKRLRPFGV--KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 44569999998 9999999999987676 99999975311111111 0000000000000124688999999999997
Q ss_pred CCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
.... + .|-.++. .+.+.+..|.+++||++
T Consensus 234 lPlt--~---------~T~~li~--~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 234 CTLT--K---------ETAGIVN--DEFLSSMKKGALLVNIA 262 (347)
T ss_pred CCCC--h---------HhhcccC--HHHHhcCCCCeEEEECC
Confidence 5321 1 1112221 23344445789999986
No 387
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.04 E-value=0.03 Score=54.73 Aligned_cols=76 Identities=16% Similarity=0.281 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc---------------------hhHH--HHHhcCCCCCeEEE
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------------------PGVT--ADISHMDTNAVVRG 101 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~---------------------~g~~--~dl~~~~~~~~v~~ 101 (358)
+..||+|+|+ |.+|+.++..|+..|+ .+|.|+|.+.. +..+ ..+........+..
T Consensus 23 ~~~~VlIiG~-GglGs~va~~La~aGv-g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 23 REKHVLIVGA-GALGAANAEALVRAGI-GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 3458999998 9999999999999886 49999998740 0111 12222222233333
Q ss_pred EeC---CCcHHhhhCCCCEEEEcC
Q 018265 102 FLG---QQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 102 ~~~---t~d~~~al~~aDiVIi~a 122 (358)
+.. ..+.++.++++|+||.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~DlVid~~ 124 (338)
T PRK12475 101 VVTDVTVEELEELVKEVDLIIDAT 124 (338)
T ss_pred EeccCCHHHHHHHhcCCCEEEEcC
Confidence 321 134567789999999985
No 388
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.03 E-value=0.069 Score=48.65 Aligned_cols=36 Identities=22% Similarity=0.347 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+..++.|+|++|.+|..++..++..|. .++++|.+.
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~--~vi~~~r~~ 39 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA--KLALIDLNQ 39 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 345899999999999999999998887 899999875
No 389
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.02 E-value=0.023 Score=53.79 Aligned_cols=71 Identities=25% Similarity=0.256 Sum_probs=46.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhC-CCCcEEE-EEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKIN-PLVSVLH-LYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~-~~~~el~-L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
|+++||+|||. |.+|..++..|... +-. +++ ++|.+... +.++..... .... .+|+++.+.++|+|+++
T Consensus 4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~-el~aV~dr~~~~--a~~~a~~~g--~~~~---~~~~eell~~~D~Vvi~ 74 (271)
T PRK13302 4 RPELRVAIAGL-GAIGKAIAQALDRGLPGL-TLSAVAVRDPQR--HADFIWGLR--RPPP---VVPLDQLATHADIVVEA 74 (271)
T ss_pred CCeeEEEEECc-cHHHHHHHHHHHhcCCCe-EEEEEECCCHHH--HHHHHHhcC--CCcc---cCCHHHHhcCCCEEEEC
Confidence 56689999998 99999999888763 222 654 77876422 222221110 0011 24677888999999999
Q ss_pred CC
Q 018265 122 AG 123 (358)
Q Consensus 122 ag 123 (358)
+.
T Consensus 75 tp 76 (271)
T PRK13302 75 AP 76 (271)
T ss_pred CC
Confidence 64
No 390
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.02 E-value=0.042 Score=52.60 Aligned_cols=57 Identities=21% Similarity=0.335 Sum_probs=46.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
.+..+|+|||.+|.||..++..|...+. .+.+++... .++++..+.||+||.+.|
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~ga--tVtv~~~~t-----------------------~~l~e~~~~ADIVIsavg 211 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHC--SVTVVHSRS-----------------------TDAKALCRQADIVVAAVG 211 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEecC
Confidence 3457999999967999999999998887 888886431 246788999999999987
Q ss_pred CC
Q 018265 124 VP 125 (358)
Q Consensus 124 ~~ 125 (358)
.+
T Consensus 212 ~~ 213 (301)
T PRK14194 212 RP 213 (301)
T ss_pred Ch
Confidence 65
No 391
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=96.02 E-value=0.027 Score=53.69 Aligned_cols=77 Identities=21% Similarity=0.371 Sum_probs=49.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch--------------hHHHHHhcCCCCCeEEEEeCCCcHHhh
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--------------GVTADISHMDTNAVVRGFLGQQQLEDA 111 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~--------------g~~~dl~~~~~~~~v~~~~~t~d~~~a 111 (358)
++||+-||| |+||-....-++.+=.-.++.++|++..+ |...=..++. ..++- + ++|.+.+
T Consensus 1 ~~kicciga-gyvggptcavia~kcp~i~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~cr-gknlf-f--stdieka 75 (481)
T KOG2666|consen 1 MVKICCIGA-GYVGGPTCAVIALKCPDIEVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQCR-GKNLF-F--STDIEKA 75 (481)
T ss_pred CceEEEecC-cccCCcchheeeecCCceEEEEEecCchHhhcccCCCCcccCCCHHHHHHHhc-CCcee-e--ecchHHH
Confidence 369999999 99987766555443222399999987511 1111011221 12222 2 5789999
Q ss_pred hCCCCEEEEcCCCCCC
Q 018265 112 LTGMDIVIIPAGVPRK 127 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~ 127 (358)
++.||+|++....|.|
T Consensus 76 i~eadlvfisvntptk 91 (481)
T KOG2666|consen 76 IKEADLVFISVNTPTK 91 (481)
T ss_pred hhhcceEEEEecCCcc
Confidence 9999999998877755
No 392
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.18 Score=47.07 Aligned_cols=34 Identities=24% Similarity=0.201 Sum_probs=30.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+.+.|+||+|.+|++++..|+.+|. +|++++.+.
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G~--~V~~~~r~~ 44 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAGF--PVALGARRV 44 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4899999999999999999999887 888888754
No 393
>PLN02503 fatty acyl-CoA reductase 2
Probab=96.01 E-value=0.095 Score=55.06 Aligned_cols=112 Identities=15% Similarity=0.084 Sum_probs=69.7
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEeCCC--chh--HH-HHHhcC-----------C-----CCCeE
Q 018265 42 GGSPGFKVAVLGAAGGIGQPLAMLMKINP-LVSVLHLYDVVN--TPG--VT-ADISHM-----------D-----TNAVV 99 (358)
Q Consensus 42 ~~~~~~KI~IiGa~G~vG~~~a~~l~~~~-~~~el~L~D~~~--~~g--~~-~dl~~~-----------~-----~~~~v 99 (358)
.+-+.++|.|+||+||+|..++..|+... -..+|.++.+.. ..+ .. .++.+. . ...++
T Consensus 115 ~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki 194 (605)
T PLN02503 115 EFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKL 194 (605)
T ss_pred hhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccE
Confidence 34467899999999999999999888754 345777776643 111 11 111110 0 01233
Q ss_pred EEEeCC----------CcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC
Q 018265 100 RGFLGQ----------QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC 154 (358)
Q Consensus 100 ~~~~~t----------~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~ 154 (358)
..+.+. .+++...++.|+||++|+... ...........|+....++++...+..
T Consensus 195 ~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~ 258 (605)
T PLN02503 195 VPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCK 258 (605)
T ss_pred EEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 332221 123344478999999987643 234455667889999999999887653
No 394
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.28 Score=46.49 Aligned_cols=115 Identities=23% Similarity=0.263 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEE-eCCCcH---Hhh-------
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGF-LGQQQL---EDA------- 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~t~d~---~~a------- 111 (358)
+..+|.|+||+|.+|..++..|+..|. +|++++++. ......++... ..+..+ ..-+|. +++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~l~~~~~~l~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA--KLALVDLEEAELAALAAELGGD---DRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcCC---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 445899999999999999999999987 899999875 22222333211 112111 011222 111
Q ss_pred hCCCCEEEEcCCCCCCC---CCC---HHhHHHHHHHHHHHHHHHHHhhC--CCeEEEEecC
Q 018265 112 LTGMDIVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKCC--PKAIVNLISN 164 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 164 (358)
+...|+||+.+|..... ..+ -...+..|+.....+++.+..+- ..+.|++++.
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 24679999999864311 111 12334556555555444443221 2456666654
No 395
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.99 E-value=0.14 Score=46.53 Aligned_cols=146 Identities=14% Similarity=0.105 Sum_probs=76.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHH-------hhhCCCCEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLE-------DALTGMDIV 118 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~-------~al~~aDiV 118 (358)
+++.|+||+|.+|.+++..|+..|. +|++.|.+... ...++.+... ..+.. .....+.+ +.+...|++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~-~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQ--PVIVSYRTHYP-AIDGLRQAGA-QCIQADFSTNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCchh-HHHHHHHcCC-EEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence 4799999999999999999999887 89999986521 1122222110 00100 00001111 112458999
Q ss_pred EEcCCCCCC--CC-CCH---HhHHHHHHHHH----HHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 119 IIPAGVPRK--PG-MTR---DDLFNINAGIV----KTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 119 Ii~ag~~~~--~g-~~r---~~~~~~N~~i~----~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
|+.+|.... .. .+. ...+..|+... +.+.+.+++.. ..+.+++++.-... .+.+..-
T Consensus 79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~------------~~~~~~~ 146 (236)
T PRK06483 79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE------------KGSDKHI 146 (236)
T ss_pred EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc------------cCCCCCc
Confidence 999986321 11 111 22334444433 34445554432 13455555432110 1233334
Q ss_pred EEEeeeccHHHHHHHHHHHhC
Q 018265 188 LLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 188 viG~t~lds~R~~~~lA~~l~ 208 (358)
.++.+...-..+-+.+|+.++
T Consensus 147 ~Y~asKaal~~l~~~~a~e~~ 167 (236)
T PRK06483 147 AYAASKAALDNMTLSFAAKLA 167 (236)
T ss_pred cHHHHHHHHHHHHHHHHHHHC
Confidence 455554444557777888775
No 396
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.97 E-value=0.057 Score=52.77 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+..||+|+|+ |.+|+.++..|+..|+ .+|.++|.+.
T Consensus 23 ~~~~VlVvG~-GglGs~va~~La~aGv-g~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGA-GALGTANAEMLVRAGV-GKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCc
Confidence 3458999998 9999999999999886 4999999874
No 397
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.93 E-value=0.008 Score=59.48 Aligned_cols=73 Identities=23% Similarity=0.262 Sum_probs=44.2
Q ss_pred EEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHHhcCCCCCeEEEEeC--CCcHHhhhCCCCEEEEcCCC
Q 018265 49 VAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTNAVVRGFLG--QQQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 49 I~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~--g~~~dl~~~~~~~~v~~~~~--t~d~~~al~~aDiVIi~ag~ 124 (358)
|+|+|+ |.+|+.++..|++.....++++.|++..+ ....++. . .......... ..++.+.++++|+||.++|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~-~-~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLL-G-DRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--T-T-TTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhcc-c-cceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 789999 99999999999988765599999997622 2222221 1 1111111111 12356788999999999864
No 398
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.93 E-value=0.075 Score=49.08 Aligned_cols=35 Identities=23% Similarity=0.159 Sum_probs=29.9
Q ss_pred CCEEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~--G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
...+.|+||+ +.+|..++..|+..|. .|++.+++.
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~--~Vi~~~r~~ 43 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGA--TVIYTYQND 43 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEecCch
Confidence 3479999997 5899999999999987 889988764
No 399
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.059 Score=47.71 Aligned_cols=101 Identities=21% Similarity=0.186 Sum_probs=57.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhh---hCCCCEEEEcCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDA---LTGMDIVIIPAG 123 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~a---l~~aDiVIi~ag 123 (358)
|++.|+||+|.+|..++..|... . ++++++++.. ....|+.+. .+.++. +...|++|..+|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~--~vi~~~r~~~-~~~~D~~~~------------~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H--EVITAGRSSG-DVQVDITDP------------ASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C--cEEEEecCCC-ceEecCCCh------------HHHHHHHHhcCCCCEEEECCC
Confidence 58999999999999999999877 3 8899887541 111222211 111222 346899999998
Q ss_pred CCCC-C--CCCHHh---HHHHHHHHHHHHHHHHHhhC-CCeEEEEec
Q 018265 124 VPRK-P--GMTRDD---LFNINAGIVKTLCEGIAKCC-PKAIVNLIS 163 (358)
Q Consensus 124 ~~~~-~--g~~r~~---~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 163 (358)
.... + +.+..+ .+..|+.....+.+....+- +.+.+++++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 6421 1 122222 23445544444444433321 345555555
No 400
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.89 E-value=0.22 Score=45.08 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=27.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDV 80 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~ 80 (358)
.+.|+||+|.+|+.++..|+..|. ++++...
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r 32 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY--RVAANCG 32 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeC
Confidence 578999999999999999998887 7888776
No 401
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.89 E-value=0.035 Score=56.84 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcC---CCCCeEEEEeCCCcHHhhhCC---CCE
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM---DTNAVVRGFLGQQQLEDALTG---MDI 117 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~---~~~~~v~~~~~t~d~~~al~~---aDi 117 (358)
...++|++||- |.+|+.++..|+..|+ +|+.+|++..+ +.++.+. .....+. ...+++++.+. +|+
T Consensus 4 ~~~~~IG~IGL-G~MG~~mA~nL~~~G~--~V~V~NRt~~k--~~~l~~~~~~~Ga~~~~---~a~s~~e~v~~l~~~dv 75 (493)
T PLN02350 4 AALSRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSK--VDETVERAKKEGNLPLY---GFKDPEDFVLSIQKPRS 75 (493)
T ss_pred CCCCCEEEEee-HHHHHHHHHHHHhCCC--eEEEECCCHHH--HHHHHHhhhhcCCcccc---cCCCHHHHHhcCCCCCE
Confidence 34568999998 9999999999999998 99999987522 2222221 0001111 12355666654 999
Q ss_pred EEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCC
Q 018265 118 VIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPV 166 (358)
Q Consensus 118 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~ 166 (358)
||++... -+.+.++...+... .|..++|..||-.
T Consensus 76 Ii~~v~~---------------~~aV~~Vi~gl~~~l~~G~iiID~sT~~ 110 (493)
T PLN02350 76 VIILVKA---------------GAPVDQTIKALSEYMEPGDCIIDGGNEW 110 (493)
T ss_pred EEEECCC---------------cHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 9997421 12333333333333 3666777776543
No 402
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.65 Score=42.31 Aligned_cols=180 Identities=14% Similarity=0.097 Sum_probs=91.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEE-eC---CCcHHh-------h
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGF-LG---QQQLED-------A 111 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~-~~---t~d~~~-------a 111 (358)
+...+.|+||++.+|..++..|++.|. .|++++++. ......++.... ..+..+ .. ..+.++ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA--TLILCDQDQSALKDTYEQCSALT--DNVYSFQLKDFSQESIRHLFDAIEQQ 79 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999987 899998876 222222332211 111111 01 112221 1
Q ss_pred hC-CCCEEEEcCCCCCCC----CCCHHh---HHHHHH----HHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHHH
Q 018265 112 LT-GMDIVIIPAGVPRKP----GMTRDD---LFNINA----GIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKK 179 (358)
Q Consensus 112 l~-~aDiVIi~ag~~~~~----g~~r~~---~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~~ 179 (358)
+. .-|++|..+|....+ ..+..+ .+..|. .+.+...+.+.+....+.|+++|.-..
T Consensus 80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~------------ 147 (227)
T PRK08862 80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD------------ 147 (227)
T ss_pred hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC------------
Confidence 23 689999998743211 112211 222332 344455666655444567777764221
Q ss_pred hCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEEecCCCcccccccccCCCCCCChhHHHHHHHHHhcC
Q 018265 180 VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNG 255 (358)
Q Consensus 180 ~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G~hg~~~~vp~~s~~~v~~~~~~~~~~~l~~~v~~~ 255 (358)
++..-.++.+.-.-..|.+.++..+. +..+++-.+ .|-|-.+.. ....+.|+++.+.+...
T Consensus 148 ---~~~~~~Y~asKaal~~~~~~la~el~--~~~Irvn~v--------~PG~i~t~~--~~~~~~~~~~~~~~~~~ 208 (227)
T PRK08862 148 ---HQDLTGVESSNALVSGFTHSWAKELT--PFNIRVGGV--------VPSIFSANG--ELDAVHWAEIQDELIRN 208 (227)
T ss_pred ---CCCcchhHHHHHHHHHHHHHHHHHHh--hcCcEEEEE--------ecCcCcCCC--ccCHHHHHHHHHHHHhh
Confidence 11112244443333456677777663 334443222 232222211 23345677776655544
No 403
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.88 E-value=0.061 Score=51.98 Aligned_cols=66 Identities=17% Similarity=0.193 Sum_probs=43.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+.+||+|||+ |.+|.+++..|...+. +++..+....... ..+.... +.. .+..+++++||+|+++.
T Consensus 2 ~~kkIgiIG~-G~mG~AiA~~L~~sG~--~Viv~~~~~~~~~-~~a~~~G----v~~----~s~~ea~~~ADiVvLaV 67 (314)
T TIGR00465 2 KGKTVAIIGY-GSQGHAQALNLRDSGL--NVIVGLRKGGASW-KKATEDG----FKV----GTVEEAIPQADLIMNLL 67 (314)
T ss_pred CcCEEEEEeE-cHHHHHHHHHHHHCCC--eEEEEECcChhhH-HHHHHCC----CEE----CCHHHHHhcCCEEEEeC
Confidence 3468999998 9999999999999887 6666554321111 1111111 111 13568889999999985
No 404
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.88 E-value=0.1 Score=52.57 Aligned_cols=118 Identities=20% Similarity=0.228 Sum_probs=67.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-------hCCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDA-------LTGMD 116 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~aD 116 (358)
+..++.|+||+|.+|..++..|+..|. +++++|.........++........+.. .+...+.+.. +...|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga--~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA--HVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 456899999999999999999998887 8999987542222222221110011111 1001111111 22589
Q ss_pred EEEEcCCCCCCC---CCC---HHhHHHHHHHHHHHHHHHHHhh---CCCeEEEEecC
Q 018265 117 IVIIPAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 164 (358)
Q Consensus 117 iVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 164 (358)
+||+++|..... .++ -...+..|+.-...+.+.+... .+.+.+++++.
T Consensus 287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 999999865321 112 2234566777777777766542 24467777664
No 405
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.85 E-value=0.062 Score=52.65 Aligned_cols=74 Identities=23% Similarity=0.284 Sum_probs=44.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEE-EEeCCCchhHHH-H-HhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTA-D-ISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~-L~D~~~~~g~~~-d-l~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
|||+|+||+|.+|..++..|...+.. +++ +++.+...+... + ..+......+.. . ..|.++.++++|+||++.+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~~l~~~~~~~~-~-~~~~~~~~~~~DvVf~alP 77 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHPHLRGLVDLNL-E-PIDEEEIAEDADVVFLALP 77 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCccccccCCcee-e-cCCHHHhhcCCCEEEECCC
Confidence 59999999999999999999876543 666 667654223212 1 111111011111 1 1244454569999999853
No 406
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.12 Score=46.64 Aligned_cols=114 Identities=16% Similarity=0.176 Sum_probs=63.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh---hC--CCCEEEE
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDA---LT--GMDIVII 120 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~a---l~--~aDiVIi 120 (358)
.++.|+||+|.+|++++..|+..|. +++++|.+... ..++..... ..+.. .+...+++++ +. ..|+||+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~--~v~~~~r~~~~--~~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW--RVIATARDAAA--LAALQALGA-EALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC--EEEEEECCHHH--HHHHHhccc-eEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 3799999999999999999988886 89999986521 112222111 01111 1111122221 22 4799999
Q ss_pred cCCCCC--C-C--CCCH---HhHHHHHHHHHHHHHHHHHhhC--CCeEEEEecCC
Q 018265 121 PAGVPR--K-P--GMTR---DDLFNINAGIVKTLCEGIAKCC--PKAIVNLISNP 165 (358)
Q Consensus 121 ~ag~~~--~-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNP 165 (358)
++|... . + ..+. ...+..|+.-...+.+.+..+- ..+.+++++.-
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~ 131 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSR 131 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCc
Confidence 988642 1 1 1122 2345667666666666655432 13455555443
No 407
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.84 E-value=0.084 Score=47.79 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=31.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
.+|.|+||+|.+|+.++..++..|. +|++++++.
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~--~V~~~~r~~ 39 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGA--QVCINSRNE 39 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4899999999999999999999887 899999865
No 408
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=95.83 E-value=0.041 Score=54.08 Aligned_cols=71 Identities=18% Similarity=0.248 Sum_probs=46.6
Q ss_pred CEEEEEcCCCchHHHHHHHHH-hCCC-CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMK-INPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~-~~~~-~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
+||+|+||+|.||+.+...|. ...+ ..+++++......|....+... ...+.. .++ .+++++.|+|++++|
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~--~~~v~~---~~~-~~~~~~vDivffa~g 73 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGT--TGTLQD---AFD-IDALKALDIIITCQG 73 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCC--cceEEc---Ccc-cccccCCCEEEEcCC
Confidence 489999999999999999888 5554 3788898775433332222111 112222 122 246899999999876
No 409
>PRK08017 oxidoreductase; Provisional
Probab=95.81 E-value=0.19 Score=45.97 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=29.8
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+|.|+||+|.+|.+++..|+..|. ++++++++.
T Consensus 4 ~vlVtGasg~IG~~la~~l~~~g~--~v~~~~r~~ 36 (256)
T PRK08017 4 SVLITGCSSGIGLEAALELKRRGY--RVLAACRKP 36 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 799999999999999999998887 888888764
No 410
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.81 E-value=0.45 Score=45.30 Aligned_cols=126 Identities=15% Similarity=0.240 Sum_probs=77.9
Q ss_pred CCCCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCC-C---CCeEEEE----eCCCcHH
Q 018265 40 AKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-T---NAVVRGF----LGQQQLE 109 (358)
Q Consensus 40 ~~~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~-~---~~~v~~~----~~t~d~~ 109 (358)
+..+...-.|.|+||++-+|..+|+.++..+- .++|.|++. ....+..+.+.. . -+++... ......+
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~--~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGA--KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCC--eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHH
Confidence 44455666899999988999999999999886 899999997 333334344321 0 0111100 0001234
Q ss_pred hhhCCCCEEEEcCCCCC-CCC--CCHHhH---HHHH----HHHHHHHHHHHHhhCCCeEEEEecCCCCc
Q 018265 110 DALTGMDIVIIPAGVPR-KPG--MTRDDL---FNIN----AGIVKTLCEGIAKCCPKAIVNLISNPVNS 168 (358)
Q Consensus 110 ~al~~aDiVIi~ag~~~-~~g--~~r~~~---~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP~d~ 168 (358)
+...+.|++|..||+.. ++. .++.++ +.-| .-.++.+.+.+.+. +++.|+.++.-...
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~aG~ 177 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASVAGL 177 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhhhcc
Confidence 55689999999999643 322 222221 2223 46788889999865 47777776544433
No 411
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.80 E-value=0.053 Score=51.91 Aligned_cols=68 Identities=21% Similarity=0.220 Sum_probs=48.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
....||+|+|+ |.+|..++..|...|. ++..+|++. ....+.++ . .. .. ...++.+.++++|+||.+.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga--~V~v~~r~~~~~~~~~~~---G--~~--~~-~~~~l~~~l~~aDiVI~t~ 218 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGA--NVTVGARKSAHLARITEM---G--LS--PF-HLSELAEEVGKIDIIFNTI 218 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHc---C--Ce--ee-cHHHHHHHhCCCCEEEECC
Confidence 34579999998 9999999999988775 999999875 22222211 1 11 11 1235678889999999985
No 412
>PRK08223 hypothetical protein; Validated
Probab=95.77 E-value=0.05 Score=51.77 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=31.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
..||+|+|+ |-+|+.++..|+..|+. +|.|+|-|.
T Consensus 27 ~s~VlIvG~-GGLGs~va~~LA~aGVG-~i~lvD~D~ 61 (287)
T PRK08223 27 NSRVAIAGL-GGVGGIHLLTLARLGIG-KFTIADFDV 61 (287)
T ss_pred cCCEEEECC-CHHHHHHHHHHHHhCCC-eEEEEeCCC
Confidence 458999998 99999999999999874 999999875
No 413
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.76 E-value=0.13 Score=49.87 Aligned_cols=94 Identities=28% Similarity=0.306 Sum_probs=59.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+...++++|+|. |.||+.+|..+. ++.-+|+-+|+... .+..+... .+. .++++.++.||+|++.+
T Consensus 143 ~l~gktvGIiG~-GrIG~avA~r~~--~Fgm~v~y~~~~~~-~~~~~~~~------~~y----~~l~ell~~sDii~l~~ 208 (324)
T COG1052 143 DLRGKTLGIIGL-GRIGQAVARRLK--GFGMKVLYYDRSPN-PEAEKELG------ARY----VDLDELLAESDIISLHC 208 (324)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHh--cCCCEEEEECCCCC-hHHHhhcC------cee----ccHHHHHHhCCEEEEeC
Confidence 456789999998 999999999998 55459999998653 11111111 111 23689999999999975
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
... .++|- .-|. +.+++..|.+++||++
T Consensus 209 Plt---~~T~h---Lin~-------~~l~~mk~ga~lVNta 236 (324)
T COG1052 209 PLT---PETRH---LINA-------EELAKMKPGAILVNTA 236 (324)
T ss_pred CCC---hHHhh---hcCH-------HHHHhCCCCeEEEECC
Confidence 321 11111 1121 2334445788998875
No 414
>PRK06484 short chain dehydrogenase; Validated
Probab=95.76 E-value=0.091 Score=53.84 Aligned_cols=35 Identities=29% Similarity=0.211 Sum_probs=31.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
...+.|+||++.+|..++..|+..|. .|+++|++.
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G~--~V~~~~r~~ 39 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAGD--QVVVADRNV 39 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 34789999999999999999999887 899999865
No 415
>PRK06484 short chain dehydrogenase; Validated
Probab=95.75 E-value=0.069 Score=54.71 Aligned_cols=156 Identities=17% Similarity=0.221 Sum_probs=86.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEE-EeCCCcHHhhh-------CCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRG-FLGQQQLEDAL-------TGM 115 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~-~~~t~d~~~al-------~~a 115 (358)
..++.|+||+|.+|.+++..|+..|. .|+++|++.. .....++.. .. ..+.. ++...+.++++ ..-
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD--RLLIIDRDAEGAKKLAEALGD-EH-LSVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCC-ce-eEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 36899999999999999999999987 8999998752 111111211 00 01111 11111222222 357
Q ss_pred CEEEEcCCCCC--CC--CCC---HHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCc
Q 018265 116 DIVIIPAGVPR--KP--GMT---RDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKR 187 (358)
Q Consensus 116 DiVIi~ag~~~--~~--g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~k 187 (358)
|++|+.+|... .+ ..+ -...+..|+.....+.+.+..+ ...+.|++++.-.... +.|..-
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~ 412 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL------------ALPPRN 412 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC------------CCCCCc
Confidence 99999998742 11 122 2234556665555555554433 2346777776654322 233344
Q ss_pred EEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 188 LLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 188 viG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
.|+.+...-..+-+.++..++ +..|++..+
T Consensus 413 ~Y~asKaal~~l~~~la~e~~--~~gI~vn~v 442 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWA--PAGIRVNTV 442 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence 566655444556777777764 344554444
No 416
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.72 E-value=0.045 Score=55.01 Aligned_cols=107 Identities=19% Similarity=0.207 Sum_probs=65.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
..+..+|+|+|+ |.+|..++..|...|. .++.++|++.... .++..... .. .+ ...++.+++.++|+||.+.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~-~~V~v~~rs~~ra--~~la~~~g-~~--~i-~~~~l~~~l~~aDvVi~aT 248 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGV-GKILIANRTYERA--EDLAKELG-GE--AV-KFEDLEEYLAEADIVISST 248 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCC-CEEEEEeCCHHHH--HHHHHHcC-Ce--Ee-eHHHHHHHHhhCCEEEECC
Confidence 345579999998 9999999999988763 3899999865221 12221111 11 11 1235678899999999987
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccH
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTV 170 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t 170 (358)
+.+..- . +.+ ..+...... ...+++-+++|-|+-.
T Consensus 249 ~s~~~i-i--------~~e----~l~~~~~~~~~~~~viDla~Prdid~ 284 (417)
T TIGR01035 249 GAPHPI-V--------SKE----DVERALRERTRPLFIIDIAVPRDVDP 284 (417)
T ss_pred CCCCce-E--------cHH----HHHHHHhcCCCCeEEEEeCCCCCCCh
Confidence 654311 0 111 111111111 2357888899998873
No 417
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.71 E-value=0.094 Score=48.83 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=31.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
..||+|+|+ |.+|+.++..|+..|+ .+|.++|.+.
T Consensus 32 ~~~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 66 (245)
T PRK05690 32 AARVLVVGL-GGLGCAASQYLAAAGV-GTLTLVDFDT 66 (245)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence 458999998 9999999999999886 4999999875
No 418
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.69 E-value=0.086 Score=48.96 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
..||+|+|+ |.+|+.++..|+..|+ .+|.++|.+.
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGV-GNLTLLDFDT 58 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCc
Confidence 458999998 9999999999999886 4999999875
No 419
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.67 E-value=0.075 Score=53.94 Aligned_cols=91 Identities=22% Similarity=0.205 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchh-HHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g-~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
....+|+|+|. |.||..++..+...|. +|..+|++.... .+.. +. .+. .+++++++.||+||.+.
T Consensus 252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga--~ViV~e~dp~~a~~A~~--~G-----~~~----~~leell~~ADIVI~at 317 (476)
T PTZ00075 252 IAGKTVVVCGY-GDVGKGCAQALRGFGA--RVVVTEIDPICALQAAM--EG-----YQV----VTLEDVVETADIFVTAT 317 (476)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHh--cC-----cee----ccHHHHHhcCCEEEECC
Confidence 45569999998 9999999999987776 889998876322 1111 11 111 24678899999999986
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCC
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 165 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 165 (358)
|.+ .++. .+.+....|.++++|++-.
T Consensus 318 Gt~---------------~iI~--~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 318 GNK---------------DIIT--LEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred Ccc---------------cccC--HHHHhccCCCcEEEEcCCC
Confidence 522 1111 1233344588999998754
No 420
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.67 E-value=0.056 Score=52.49 Aligned_cols=71 Identities=15% Similarity=0.172 Sum_probs=49.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
..+++|||+ |.+|...+..+.....+.+|.++|++. ....+.++.+. ...+.. ..|.++++++||+|+.+.
T Consensus 128 ~~~lgiiG~-G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~--g~~v~~---~~~~~eav~~aDiVitaT 200 (325)
T TIGR02371 128 SSVLGIIGA-GRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDY--EVPVRA---ATDPREAVEGCDILVTTT 200 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhh--CCcEEE---eCCHHHHhccCCEEEEec
Confidence 458999998 999998766665544467999999986 23333444321 222333 257789999999999864
No 421
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.64 E-value=0.04 Score=55.59 Aligned_cols=124 Identities=24% Similarity=0.312 Sum_probs=70.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhH---HHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---TADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~---~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
+.++|.|+|+ |.+|..+|..|+..|. +|+++|.+..... ..++... .++.+... ...+...++|+||.+
T Consensus 4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~-~~~~~~~~~d~vv~~ 75 (450)
T PRK14106 4 KGKKVLVVGA-GVSGLALAKFLKKLGA--KVILTDEKEEDQLKEALEELGEL----GIELVLGE-YPEEFLEGVDLVVVS 75 (450)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc----CCEEEeCC-cchhHhhcCCEEEEC
Confidence 4569999998 8899999999999998 9999998752111 2223221 12222111 112446789999999
Q ss_pred CCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec--CCCCccHHHHHHHHHH
Q 018265 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS--NPVNSTVPIAAEVFKK 179 (358)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NP~d~~t~~~~~~~~~ 179 (358)
+|.+.... .....-..+++++.......... + ..+|-+| |==.+.+.+++.++..
T Consensus 76 ~g~~~~~~-~~~~a~~~~i~~~~~~~~~~~~~-~-~~vI~ITGS~GKTTt~~~l~~iL~~ 132 (450)
T PRK14106 76 PGVPLDSP-PVVQAHKKGIEVIGEVELAYRFS-K-APIVAITGTNGKTTTTTLLGEIFKN 132 (450)
T ss_pred CCCCCCCH-HHHHHHHCCCcEEeHHHHHHhhc-C-CCEEEEeCCCchHHHHHHHHHHHHH
Confidence 88743211 11111234666666555544322 2 3455554 3333444555555543
No 422
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.62 E-value=0.059 Score=54.25 Aligned_cols=71 Identities=20% Similarity=0.212 Sum_probs=45.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhh-hCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDA-LTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~a-l~~aDiVIi~a 122 (358)
|||.|+|+ |.+|.+++..|...+. +++++|.+... ...+........+.+ ......++++ ++++|.||++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~--~v~vid~~~~~--~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN--DVTVIDTDEER--LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--cEEEEECCHHH--HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 68999998 9999999999988887 89999987522 122221000011111 0011234445 78999999985
No 423
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.61 E-value=0.039 Score=53.78 Aligned_cols=71 Identities=24% Similarity=0.444 Sum_probs=46.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~-~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
++||+|+||+|.+|..++..|...++ ..+|..+-.+...+...++.. ..+... ..+ ..+++++|+||++.|
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g----~~i~v~--d~~-~~~~~~vDvVf~A~g 72 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG----KELKVE--DLT-TFDFSGVDIALFSAG 72 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC----ceeEEe--eCC-HHHHcCCCEEEECCC
Confidence 46999999999999999999988653 347777755443333332221 223322 112 245689999999865
No 424
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.65 Score=42.71 Aligned_cols=116 Identities=16% Similarity=0.172 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCcH---Hh---hhCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQL---ED---ALTGM 115 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d~---~~---al~~a 115 (358)
+.++|.|+|++|.+|..++..|+..|. +|+++|++. ......++.... ...+..+. .-+|. ++ .+...
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC--HLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAEAGDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHhCCC
Confidence 345899999999999999999999887 899999875 222222233211 11122111 11222 11 24579
Q ss_pred CEEEEcCCCCCC-C--CCCH---HhHHHHHHH----HHHHHHHHHHhhCCCeEEEEecC
Q 018265 116 DIVIIPAGVPRK-P--GMTR---DDLFNINAG----IVKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 116 DiVIi~ag~~~~-~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 164 (358)
|++|+.+|.... + ..+. ...+..|+. +.+.+.+.+.+.. .+.+++++.
T Consensus 83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss 140 (259)
T PRK06125 83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIG 140 (259)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecC
Confidence 999999886421 1 1111 223444554 4444555555432 356666554
No 425
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.59 E-value=0.58 Score=43.80 Aligned_cols=154 Identities=14% Similarity=0.127 Sum_probs=82.2
Q ss_pred CCEEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHHhcCCCCCeEEEEeCCCcH----------Hhhh
Q 018265 46 GFKVAVLGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQL----------EDAL 112 (358)
Q Consensus 46 ~~KI~IiGa~G--~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~t~d~----------~~al 112 (358)
...+.|+||++ .+|..++..|+..|. .|++++++.. .....++.+... ..+-....-+|. .+.+
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGA--ELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCC--EEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 34789999964 799999999999987 8999987642 111222321100 001000011121 1223
Q ss_pred CCCCEEEEcCCCCCC-----C--CCCHH---hHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHH
Q 018265 113 TGMDIVIIPAGVPRK-----P--GMTRD---DLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFK 178 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~-----~--g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~ 178 (358)
..-|++|+.||.... + ..+.. ..+..|+.. .+.+.+.+. ..+.||+++.-....
T Consensus 84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~---~~G~Iv~isS~~~~~--------- 151 (271)
T PRK06505 84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP---DGGSMLTLTYGGSTR--------- 151 (271)
T ss_pred CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc---cCceEEEEcCCCccc---------
Confidence 568999999986431 1 12221 223445443 344444443 246677766533211
Q ss_pred HhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 179 KVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 179 ~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+.|..-.++.+.-.-..|-+.+|..++ +..|++..+
T Consensus 152 ---~~~~~~~Y~asKaAl~~l~r~la~el~--~~gIrVn~v 187 (271)
T PRK06505 152 ---VMPNYNVMGVAKAALEASVRYLAADYG--PQGIRVNAI 187 (271)
T ss_pred ---cCCccchhhhhHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence 233333566665555567788888874 455554443
No 426
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.56 E-value=0.062 Score=49.34 Aligned_cols=36 Identities=33% Similarity=0.451 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+..||+|+|+ |.+|+.++..|+..|+ .++.|+|.+.
T Consensus 20 ~~~~VlivG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 55 (228)
T cd00757 20 KNARVLVVGA-GGLGSPAAEYLAAAGV-GKLGLVDDDV 55 (228)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence 3458999998 9999999999999886 4999999764
No 427
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.56 E-value=0.077 Score=52.32 Aligned_cols=72 Identities=21% Similarity=0.195 Sum_probs=44.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhC-CC-CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKIN-PL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~-~~-~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
++||+|+||+|.+|..+...++.. .+ ..+++++......+....+.. ....... ..|. +.++++|+|+++++
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g----~~~~v~~-~~~~-~~~~~~Divf~a~~ 74 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG----KEGTLQD-AFDI-DALKKLDIIITCQG 74 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC----CcceEEe-cCCh-hHhcCCCEEEECCC
Confidence 369999999999999999755554 44 456888765432222222221 1112221 1232 55799999999875
No 428
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.55 E-value=0.12 Score=46.41 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
..||+|+|+ |.+|+.++..|+..|+ .+|.++|.+.
T Consensus 19 ~s~VlviG~-gglGsevak~L~~~GV-g~i~lvD~d~ 53 (198)
T cd01485 19 SAKVLIIGA-GALGAEIAKNLVLAGI-DSITIVDHRL 53 (198)
T ss_pred hCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence 458999998 8899999999999987 4899999774
No 429
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.55 E-value=0.079 Score=51.51 Aligned_cols=73 Identities=16% Similarity=0.238 Sum_probs=49.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
..+|+|+|+ |..|...+..+.....+.++.++|++. .+..+.++.+.. ...+.. ..|+++++.+||+||.+..
T Consensus 132 ~~~v~IiGa-G~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~-g~~v~~---~~d~~~al~~aDiVi~aT~ 206 (330)
T PRK08291 132 ASRAAVIGA-GEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAEL-GIPVTV---ARDVHEAVAGADIIVTTTP 206 (330)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhcc-CceEEE---eCCHHHHHccCCEEEEeeC
Confidence 459999998 999998877776533356999999876 233334443221 122322 3578899999999988743
No 430
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=95.54 E-value=0.14 Score=49.44 Aligned_cols=66 Identities=17% Similarity=0.184 Sum_probs=44.9
Q ss_pred CEEEEEcCCCc--------------------hHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHHhcCCCCCeEEEEe
Q 018265 47 FKVAVLGAAGG--------------------IGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTNAVVRGFL 103 (358)
Q Consensus 47 ~KI~IiGa~G~--------------------vG~~~a~~l~~~~~~~el~L~D~~~~---~g~~~dl~~~~~~~~v~~~~ 103 (358)
|||+|-|| |+ -|+.+|..|+..|+ +|+++|++.. ......+.+... ..
T Consensus 1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh--eV~V~Drnrsa~e~e~~e~LaeaGA----~~-- 71 (341)
T TIGR01724 1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH--DVVLAEPNREFMSDDLWKKVEDAGV----KV-- 71 (341)
T ss_pred CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhHHHHHCCC----ee--
Confidence 68888887 64 26777888888888 9999998752 122233443221 11
Q ss_pred CCCcHHhhhCCCCEEEEcC
Q 018265 104 GQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 104 ~t~d~~~al~~aDiVIi~a 122 (358)
.++..++.++||+||++-
T Consensus 72 -AaS~aEAAa~ADVVIL~L 89 (341)
T TIGR01724 72 -VSDDKEAAKHGEIHVLFT 89 (341)
T ss_pred -cCCHHHHHhCCCEEEEec
Confidence 235679999999999984
No 431
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.53 E-value=0.072 Score=56.06 Aligned_cols=138 Identities=14% Similarity=0.193 Sum_probs=82.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcH----HhhhCCCCEEEEc
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQL----EDALTGMDIVIIP 121 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~----~~al~~aDiVIi~ 121 (358)
..+|.|+|. |.+|+.++..|...+. +++.+|.|+. .+..+.+.. .+-+.+ ..++. +.-+++||.||++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~--~v~~~~~~g-~~v~~G--Dat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKM--RITVLERDIS--AVNLMRKYG-YKVYYG--DATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCC--CEEEEECCHH--HHHHHHhCC-CeEEEe--eCCCHHHHHhcCCccCCEEEEE
Confidence 468999998 9999999999998887 8999998862 122233221 122222 11232 1235789999998
Q ss_pred CCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEe-cCCCCccHHHHHHHHHHhCCCCCCcEEEeeeccHHHHH
Q 018265 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI-SNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRAN 200 (358)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNP~d~~t~~~~~~~~~~~~~p~~kviG~t~lds~R~~ 200 (358)
.+.+ ..|. .++..++++.|+..++.- .||.+.- .+++. | .+.++-=+...+.++-
T Consensus 472 ~~d~-----------~~n~----~i~~~~r~~~p~~~IiaRa~~~~~~~------~L~~~-G--a~~vv~e~~es~l~l~ 527 (601)
T PRK03659 472 CNEP-----------EDTM----KIVELCQQHFPHLHILARARGRVEAH------ELLQA-G--VTQFSRETFSSALELG 527 (601)
T ss_pred eCCH-----------HHHH----HHHHHHHHHCCCCeEEEEeCCHHHHH------HHHhC-C--CCEEEccHHHHHHHHH
Confidence 4321 3343 355667788898776654 4665332 23443 3 2444433433344555
Q ss_pred HHHHHHhCCCCCCCc
Q 018265 201 TFVAEVLGLDPREVD 215 (358)
Q Consensus 201 ~~lA~~l~v~~~~v~ 215 (358)
...=..+|++++++.
T Consensus 528 ~~~L~~lg~~~~~~~ 542 (601)
T PRK03659 528 RKTLVSLGMHPHQAQ 542 (601)
T ss_pred HHHHHHcCCCHHHHH
Confidence 555567788776663
No 432
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.53 E-value=0.055 Score=53.49 Aligned_cols=82 Identities=16% Similarity=0.193 Sum_probs=54.0
Q ss_pred cCCCCCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEE-EeCCCcHHhhhCCCC
Q 018265 38 CRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRG-FLGQQQLEDALTGMD 116 (358)
Q Consensus 38 ~~~~~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~-~~~t~d~~~al~~aD 116 (358)
....++.++.||+|+|+ |.+|...+..+...|. ++..+|++.... ..+.... ...+.. .....++.+.++++|
T Consensus 159 ~~~~~~l~~~~VlViGa-G~vG~~aa~~a~~lGa--~V~v~d~~~~~~--~~l~~~~-g~~v~~~~~~~~~l~~~l~~aD 232 (370)
T TIGR00518 159 LGGVPGVEPGDVTIIGG-GVVGTNAAKMANGLGA--TVTILDINIDRL--RQLDAEF-GGRIHTRYSNAYEIEDAVKRAD 232 (370)
T ss_pred ecCCCCCCCceEEEEcC-CHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHhc-CceeEeccCCHHHHHHHHccCC
Confidence 44555667779999998 9999999999988886 799999875221 1121110 111111 111235677889999
Q ss_pred EEEEcCCCC
Q 018265 117 IVIIPAGVP 125 (358)
Q Consensus 117 iVIi~ag~~ 125 (358)
+||.+.+.+
T Consensus 233 vVI~a~~~~ 241 (370)
T TIGR00518 233 LLIGAVLIP 241 (370)
T ss_pred EEEEccccC
Confidence 999987654
No 433
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.50 E-value=0.06 Score=52.08 Aligned_cols=73 Identities=27% Similarity=0.350 Sum_probs=47.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEeCCCchhHH-HHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVT-ADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~-~~~el~L~D~~~~~g~~-~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
++||+|+||+|.||+.+...|.... .+.++.++=..+..|.. .++..-.. .+.. ...|. .+++++|+|++++|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~--~v~~--~~~~~-~~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSI--GVPE--DAADE-FVFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccc--cCcc--ccccc-cccccCCEEEEeCc
Confidence 3699999999999999999999854 46667777665433332 33332110 0110 01232 45779999999886
No 434
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.48 E-value=0.85 Score=42.26 Aligned_cols=159 Identities=13% Similarity=0.123 Sum_probs=83.4
Q ss_pred CCCEEEEEcCCC--chHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcC-CCCCeEEE-EeCCCcHH-------hhh
Q 018265 45 PGFKVAVLGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTNAVVRG-FLGQQQLE-------DAL 112 (358)
Q Consensus 45 ~~~KI~IiGa~G--~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~-~~~~~v~~-~~~t~d~~-------~al 112 (358)
+...+.|+||++ .+|..++..|+..|. .|++.+.+. ......++... .....+.. ++...+.+ +.+
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~--~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA--ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC--EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 344789999965 599999999998887 788888754 12223333221 11000110 11111111 223
Q ss_pred CCCCEEEEcCCCCCC-----C--CCCH---HhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 113 TGMDIVIIPAGVPRK-----P--GMTR---DDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~-----~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
...|++|..+|.... + ..+. ...+..|+.....+++.+...- ..+.|++++......
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------ 152 (260)
T PRK06603 85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK------------ 152 (260)
T ss_pred CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc------------
Confidence 568999998886421 1 1121 2234455544444444332221 346777777543221
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+.|..-.|+.+.-.-..|.+.+|..++ +..|++..+
T Consensus 153 ~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~v 188 (260)
T PRK06603 153 VIPNYNVMGVAKAALEASVKYLANDMG--ENNIRVNAI 188 (260)
T ss_pred CCCcccchhhHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence 233334566665555667788888774 445554443
No 435
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.48 E-value=0.07 Score=51.75 Aligned_cols=73 Identities=12% Similarity=0.193 Sum_probs=48.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
..+|+|||+ |.+|...+..+....-+.+|.++|++. ....+.++.+. ....+..+ .|+++++++||+||++..
T Consensus 127 ~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~-~~~~~~~~---~~~~~~~~~aDiVi~aT~ 201 (325)
T PRK08618 127 AKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSK-FNTEIYVV---NSADEAIEEADIIVTVTN 201 (325)
T ss_pred CcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHh-cCCcEEEe---CCHHHHHhcCCEEEEccC
Confidence 348999998 999988776665443457999999876 22333334321 11233332 567899999999998743
No 436
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=95.47 E-value=0.047 Score=53.99 Aligned_cols=35 Identities=29% Similarity=0.450 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
..||+|+|+ |.+|+.++..|+..|+ .+|.++|.+.
T Consensus 41 ~~~VliiG~-GglG~~v~~~La~~Gv-g~i~ivD~D~ 75 (370)
T PRK05600 41 NARVLVIGA-GGLGCPAMQSLASAGV-GTITLIDDDT 75 (370)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence 458999998 9999999999999886 4999999874
No 437
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.46 E-value=0.039 Score=53.84 Aligned_cols=72 Identities=21% Similarity=0.382 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~-~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
+++||+|+||+|.+|.-+...|...+. ..+|.++-..+..|..+.+.. ..+... ..+. ++++++|+|+++.+
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~----~~l~~~--~~~~-~~~~~vD~vFla~p 75 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG----KNLRVR--EVDS-FDFSQVQLAFFAAG 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC----cceEEe--eCCh-HHhcCCCEEEEcCC
Confidence 347999999999999999999986542 447777755443333332221 122221 1222 34789999999753
No 438
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.45 E-value=0.66 Score=43.58 Aligned_cols=154 Identities=16% Similarity=0.127 Sum_probs=80.2
Q ss_pred CCEEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHHhcCCCCCeEEEEeCCCcHH----------hhh
Q 018265 46 GFKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTNAVVRGFLGQQQLE----------DAL 112 (358)
Q Consensus 46 ~~KI~IiGa~--G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~dl~~~~~~~~v~~~~~t~d~~----------~al 112 (358)
...+.|+||+ +.+|..++..|+..|. .|++.|++.. .....++.+.......-.. .-+|.+ +.+
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~--~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~-Dv~d~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGA--ELAFTYLNEALKKRVEPIAQELGSDYVYEL-DVSKPEHFKSLAESLKKDL 81 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEecCHHHHHHHHHHHHhcCCceEEEe-cCCCHHHHHHHHHHHHHHc
Confidence 3588999985 5799999999999987 8899988741 1112222111000111001 112221 123
Q ss_pred CCCCEEEEcCCCCCC-----C--CCCH---HhHHHHHHHH----HHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHHH
Q 018265 113 TGMDIVIIPAGVPRK-----P--GMTR---DDLFNINAGI----VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFK 178 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~-----~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~~ 178 (358)
...|++|..||.... + ..+. ...+.-|+.. .+.+.+.+.+ ++.|+++|.-....
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~--------- 149 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGVK--------- 149 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCcc---------
Confidence 467999999996421 1 1222 2234556444 4444444432 46667665322111
Q ss_pred HhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 179 KVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 179 ~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
..|..-.|+.+.-.-..|-+.+|..++ +..|++..+
T Consensus 150 ---~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~v 185 (274)
T PRK08415 150 ---YVPHYNVMGVAKAALESSVRYLAVDLG--KKGIRVNAI 185 (274)
T ss_pred ---CCCcchhhhhHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence 122223455554444556777777763 445544433
No 439
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=95.42 E-value=0.054 Score=52.31 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=46.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
.+++|+|+ |..+..-+..+...-.+.+|.++|++. .+..+.++.+ . ...+... .|.++|+++||+|+.+.
T Consensus 129 ~~l~viGa-G~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~-~~~v~~~---~~~~~av~~aDii~taT 200 (313)
T PF02423_consen 129 RTLGVIGA-GVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-L-GVPVVAV---DSAEEAVRGADIIVTAT 200 (313)
T ss_dssp -EEEEE---SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-C-CTCEEEE---SSHHHHHTTSSEEEE--
T ss_pred ceEEEECC-CHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-c-cccceec---cchhhhcccCCEEEEcc
Confidence 38999998 999888877665532378999999986 4455566666 2 3445443 57899999999988753
No 440
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=95.41 E-value=0.25 Score=45.53 Aligned_cols=156 Identities=16% Similarity=0.056 Sum_probs=79.3
Q ss_pred EEEEEcCCCchHHHHHHHHHh----CCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe-CCCcH---HhhhC----
Q 018265 48 KVAVLGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL-GQQQL---EDALT---- 113 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~----~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~-~t~d~---~~al~---- 113 (358)
.+.|+||++.+|..++..|+. .|. .|++.+++. ......++........+..+. .-+|. ++.++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~--~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~ 79 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS--VLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRE 79 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc--EEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence 478999999999999999986 455 889998875 233333444311111222211 11222 12221
Q ss_pred -------CCCEEEEcCCCCCCC----C-CC----HHhHHHHHHHH----HHHHHHHHHhh-CCCeEEEEecCCCCccHHH
Q 018265 114 -------GMDIVIIPAGVPRKP----G-MT----RDDLFNINAGI----VKTLCEGIAKC-CPKAIVNLISNPVNSTVPI 172 (358)
Q Consensus 114 -------~aDiVIi~ag~~~~~----g-~~----r~~~~~~N~~i----~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~ 172 (358)
+-|++|+.+|..... . .. -...+..|+.- .+.+.+.+.+. ...+.|++++......
T Consensus 80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~--- 156 (256)
T TIGR01500 80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ--- 156 (256)
T ss_pred ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC---
Confidence 125788888863211 1 11 12344555443 45555555543 2235667665533211
Q ss_pred HHHHHHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 173 AAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 173 ~~~~~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
++|..-.++.+......+.+.++..+. +..|++..+
T Consensus 157 ---------~~~~~~~Y~asKaal~~l~~~la~e~~--~~~i~v~~v 192 (256)
T TIGR01500 157 ---------PFKGWALYCAGKAARDMLFQVLALEEK--NPNVRVLNY 192 (256)
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEe
Confidence 222222344444334456667776664 455655544
No 441
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.38 E-value=0.24 Score=44.70 Aligned_cols=72 Identities=11% Similarity=0.070 Sum_probs=46.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
.+..||.|||+ |.+|...+..|...|. +|++++.+... ...++.+.. .+......-+ ++.+.++|+||.+.+
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga--~V~VIs~~~~~-~l~~l~~~~---~i~~~~~~~~-~~~l~~adlViaaT~ 79 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGA--HIVVISPELTE-NLVKLVEEG---KIRWKQKEFE-PSDIVDAFLVIAATN 79 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCCCCH-HHHHHHhCC---CEEEEecCCC-hhhcCCceEEEEcCC
Confidence 34569999999 9999999999988885 89999754322 223333221 1222111112 356899999888754
No 442
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.18 Score=47.32 Aligned_cols=112 Identities=18% Similarity=0.189 Sum_probs=60.6
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEe-CCCc---HHhhh------CCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFL-GQQQ---LEDAL------TGM 115 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~-~t~d---~~~al------~~a 115 (358)
.+.|+|| |.+|.+++..|. .|. +|++.|++.. .....++.... ..+..+. .-+| .+.++ ...
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G~--~Vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AGK--KVLLADYNEENLEAAAKTLREAG--FDVSTQEVDVSSRESVKALAATAQTLGPV 77 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence 4566776 899999999986 565 8999998752 22222333211 1222111 1112 22222 358
Q ss_pred CEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCC
Q 018265 116 DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPV 166 (358)
Q Consensus 116 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~ 166 (358)
|++|+.+|.... ..+-...+..|+.....+++.+... .+++.+++++...
T Consensus 78 d~li~nAG~~~~-~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 78 TGLVHTAGVSPS-QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred CEEEECCCcCCc-hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 999999987521 2233445666766655555555443 1234445554433
No 443
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.37 E-value=0.066 Score=47.00 Aligned_cols=57 Identities=30% Similarity=0.494 Sum_probs=44.6
Q ss_pred CCCCCEEEEEcCCCc-hHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 43 GSPGFKVAVLGAAGG-IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~-vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
+.+..||+|+|+ |. +|..++..|...+. ++.+++.+. .++.+.+++||+||.+
T Consensus 41 ~l~gk~vlViG~-G~~~G~~~a~~L~~~g~--~V~v~~r~~-----------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 41 DLAGKKVVVVGR-SNIVGKPLAALLLNRNA--TVTVCHSKT-----------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHhhCCC--EEEEEECCc-----------------------hhHHHHHhhCCEEEEc
Confidence 345669999999 86 58889999988876 788887531 2456789999999998
Q ss_pred CCCC
Q 018265 122 AGVP 125 (358)
Q Consensus 122 ag~~ 125 (358)
.+.|
T Consensus 95 t~~~ 98 (168)
T cd01080 95 VGKP 98 (168)
T ss_pred CCCC
Confidence 7765
No 444
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.33 E-value=0.36 Score=44.71 Aligned_cols=160 Identities=13% Similarity=0.110 Sum_probs=80.2
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHHhcC-CCCCeEEE-EeCCCcHH-------hhh
Q 018265 45 PGFKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTNAVVRG-FLGQQQLE-------DAL 112 (358)
Q Consensus 45 ~~~KI~IiGa~--G~vG~~~a~~l~~~~~~~el~L~D~~~~-~g~~~dl~~~-~~~~~v~~-~~~t~d~~-------~al 112 (358)
+...+.|+||+ +.+|..++..|+..|. .|++.|++.. .....++... .....+.. .+...+.+ +.+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~--~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA--ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc
Confidence 34578999986 3799999999999887 8999998752 1111222111 10000110 00011111 123
Q ss_pred CCCCEEEEcCCCCCC-----C--CCC---HHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHhC
Q 018265 113 TGMDIVIIPAGVPRK-----P--GMT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVG 181 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~~ 181 (358)
..-|++|..+|.... + ..+ -.+.+..|+.-...+++.+..+- ..+.+++++......
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~------------ 154 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK------------ 154 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc------------
Confidence 457999999986431 0 112 12334555544444444333221 235666655332111
Q ss_pred CCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 182 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 182 ~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
..|..-.++.+.-.-..+-+.++..++ +..|++..+-
T Consensus 155 ~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~Vn~v~ 191 (258)
T PRK07533 155 VVENYNLMGPVKAALESSVRYLAAELG--PKGIRVHAIS 191 (258)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHhh--hcCcEEEEEe
Confidence 122223455554444556677777764 4455554443
No 445
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.30 E-value=0.08 Score=50.89 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
...+|+|+|+ |.+|...+..+.......++.++|++. +...+.++... ...+. ..+.++++.+||+||.+.
T Consensus 124 ~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~--~~~~~----~~~~~~av~~aDiVitaT 196 (304)
T PRK07340 124 PPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL--GPTAE----PLDGEAIPEAVDLVVTAT 196 (304)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc--CCeeE----ECCHHHHhhcCCEEEEcc
Confidence 3459999998 999999998886533346899999976 33334444321 12222 246788999999999875
Q ss_pred C
Q 018265 123 G 123 (358)
Q Consensus 123 g 123 (358)
.
T Consensus 197 ~ 197 (304)
T PRK07340 197 T 197 (304)
T ss_pred C
Confidence 4
No 446
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.30 E-value=1.4 Score=40.77 Aligned_cols=158 Identities=15% Similarity=0.171 Sum_probs=81.2
Q ss_pred CCCEEEEEcC--CCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCe-EEE-EeCCCcHHh-------hh
Q 018265 45 PGFKVAVLGA--AGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAV-VRG-FLGQQQLED-------AL 112 (358)
Q Consensus 45 ~~~KI~IiGa--~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~-v~~-~~~t~d~~~-------al 112 (358)
+.+.+.|+|| ++.+|..++..|+..|. .|++.+++. ......++........ +.. .+...+.++ .+
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA--ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 4457999996 46899999999999887 888876543 1222223321100000 110 001112221 23
Q ss_pred CCCCEEEEcCCCCCC-----C---CCCHHh---HHHHHHHHH----HHHHHHHHhhCCCeEEEEecCCCCccHHHHHHHH
Q 018265 113 TGMDIVIIPAGVPRK-----P---GMTRDD---LFNINAGIV----KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVF 177 (358)
Q Consensus 113 ~~aDiVIi~ag~~~~-----~---g~~r~~---~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~~ 177 (358)
...|++|+.+|.... + ..+..+ .+..|+... +.+.+.+++. .+.|+++|......
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~~-------- 152 (261)
T PRK08690 83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAVR-------- 152 (261)
T ss_pred CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEccccccc--------
Confidence 468999999987432 1 112221 123454333 3334444322 35677776543221
Q ss_pred HHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 178 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 178 ~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.|..-.++.+.-.-..+.+.+|..++ +..|++..+-
T Consensus 153 ----~~~~~~~Y~asKaal~~l~~~la~e~~--~~gIrVn~i~ 189 (261)
T PRK08690 153 ----AIPNYNVMGMAKASLEAGIRFTAACLG--KEGIRCNGIS 189 (261)
T ss_pred ----CCCCcccchhHHHHHHHHHHHHHHHhh--hcCeEEEEEe
Confidence 233334566655444456677777663 4556555443
No 447
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.29 E-value=0.044 Score=51.34 Aligned_cols=68 Identities=26% Similarity=0.257 Sum_probs=43.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+|||+|+|++|.+|+.++..+...+-..-+.++|.+....... .. ..+. .++|+++.++++|+||...
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~----~~--~~i~---~~~dl~~ll~~~DvVid~t 68 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ----GA--LGVA---ITDDLEAVLADADVLIDFT 68 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc----CC--CCcc---ccCCHHHhccCCCEEEECC
Confidence 4799999987999999998877654332344577765211111 11 1121 2367888888999999664
No 448
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.29 E-value=0.089 Score=45.76 Aligned_cols=66 Identities=15% Similarity=0.171 Sum_probs=42.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+..+|+|||- |.-|.+.+..|...|+ +++.-..........--.+. + + ..+.+||.+.||+|+++.
T Consensus 3 ~~k~IAViGy-GsQG~a~AlNLrDSG~--~V~Vglr~~s~s~~~A~~~G-f----~----v~~~~eAv~~aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGY-GSQGHAHALNLRDSGV--NVIVGLREGSASWEKAKADG-F----E----VMSVAEAVKKADVVMLLL 68 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC---EEEEEE-TTCHHHHHHHHTT------E----CCEHHHHHHC-SEEEE-S
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCC--CEEEEecCCCcCHHHHHHCC-C----e----eccHHHHHhhCCEEEEeC
Confidence 4569999998 9999999999999998 77666654432222212222 1 1 135689999999999983
No 449
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.28 E-value=0.045 Score=53.55 Aligned_cols=71 Identities=24% Similarity=0.408 Sum_probs=45.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~-~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
++||+|+||+|.+|..+...|...++ ..+|.++......|...+.. ...+... ..+ .+++.++|+||++.+
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~----~~~~~v~--~~~-~~~~~~~D~vf~a~p 78 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE----GRDYTVE--ELT-EDSFDGVDIALFSAG 78 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec----CceeEEE--eCC-HHHHcCCCEEEECCC
Confidence 36999999999999999988887543 45777775544223322221 1122221 123 356799999999865
No 450
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.27 E-value=0.087 Score=53.02 Aligned_cols=107 Identities=20% Similarity=0.272 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
.+..+|+|+|+ |.+|..++..+...|. .+++++|++.... .++..... ..+.. ..++.+++.++|+||.+.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~-~~V~v~~r~~~ra--~~la~~~g-~~~~~---~~~~~~~l~~aDvVI~aT~ 251 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGV-RKITVANRTLERA--EELAEEFG-GEAIP---LDELPEALAEADIVISSTG 251 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCC-CeEEEEeCCHHHH--HHHHHHcC-CcEee---HHHHHHHhccCCEEEECCC
Confidence 45579999998 9999999998887664 4789999865221 12221110 11111 1456778899999999876
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHH-hhCCCeEEEEecCCCCccH
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIA-KCCPKAIVNLISNPVNSTV 170 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~-~~~p~a~viv~tNP~d~~t 170 (358)
.+... . +...++.. +. +.....+++-.++|-|+-.
T Consensus 252 s~~~~-i--------~~~~l~~~---~~~~~~~~~vviDla~Prdid~ 287 (423)
T PRK00045 252 APHPI-I--------GKGMVERA---LKARRHRPLLLVDLAVPRDIEP 287 (423)
T ss_pred CCCcE-E--------cHHHHHHH---HhhccCCCeEEEEeCCCCCCcc
Confidence 54211 0 11111111 11 1124567888899998873
No 451
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.25 E-value=0.45 Score=44.56 Aligned_cols=160 Identities=13% Similarity=0.125 Sum_probs=83.6
Q ss_pred CCCCEEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcC-CCCCeEEE-EeCCCcHH-------hh
Q 018265 44 SPGFKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTNAVVRG-FLGQQQLE-------DA 111 (358)
Q Consensus 44 ~~~~KI~IiGa~--G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~-~~~~~v~~-~~~t~d~~-------~a 111 (358)
++...+.|+||+ +.+|..++..|+..|. .|++.+++. ......++... .....+.. .+...+.+ +.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~--~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA--ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 344589999985 5799999999999987 888887643 11222222211 10000110 00011111 22
Q ss_pred hCCCCEEEEcCCCCCC-----C--CCC---HHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 112 LTGMDIVIIPAGVPRK-----P--GMT---RDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
+..-|++|+.||.... + ..+ -...+..|+.-...+++.+..+- ..+.+++++.....
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~------------ 153 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE------------ 153 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc------------
Confidence 3457999999986431 1 122 22334556544444444433321 24667766643211
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
.+.|....++.+.-....+-+.++..+. +..|++..+
T Consensus 154 ~~~p~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~v 190 (272)
T PRK08159 154 KVMPHYNVMGVAKAALEASVKYLAVDLG--PKNIRVNAI 190 (272)
T ss_pred cCCCcchhhhhHHHHHHHHHHHHHHHhc--ccCeEEEEe
Confidence 1233334566665555567777777764 455655444
No 452
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.51 Score=45.16 Aligned_cols=160 Identities=14% Similarity=0.130 Sum_probs=84.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC------------chhHHHHHhcCCCCCeEEEE----eCCCcH
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------------TPGVTADISHMDTNAVVRGF----LGQQQL 108 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~------------~~g~~~dl~~~~~~~~v~~~----~~t~d~ 108 (358)
+.+.+.|+||++.+|..++..|+..|. .|++++++. .......+.... ..+..+ +...+.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA--TVYVTGRSTRARRSEYDRPETIEETAELVTAAG--GRGIAVQVDHLVPEQV 82 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecccccccccccccchHHHHHHHHHhcC--CceEEEEcCCCCHHHH
Confidence 445899999999999999999999887 899998763 111122232211 111111 011122
Q ss_pred Hh-------hhCCCCEEEEcC-CCCC-----CC--CCCH---HhHHHHH----HHHHHHHHHHHHhhCCCeEEEEecCCC
Q 018265 109 ED-------ALTGMDIVIIPA-GVPR-----KP--GMTR---DDLFNIN----AGIVKTLCEGIAKCCPKAIVNLISNPV 166 (358)
Q Consensus 109 ~~-------al~~aDiVIi~a-g~~~-----~~--g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP~ 166 (358)
+. .+...|++|+.+ |... .+ ..+. .+.+..| +-..+.+.+.+.+. ..+.||++|...
T Consensus 83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-~~g~IV~isS~~ 161 (305)
T PRK08303 83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-PGGLVVEITDGT 161 (305)
T ss_pred HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-CCcEEEEECCcc
Confidence 21 224679999988 7421 11 1111 1223333 34455566666443 346777776533
Q ss_pred CccHHHHHHHHHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 167 NSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 167 d~~t~~~~~~~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
... ...+.+..-.|+.+......|.+.+|..++ +..|++..+-
T Consensus 162 ~~~---------~~~~~~~~~~Y~asKaal~~lt~~La~el~--~~gIrVn~v~ 204 (305)
T PRK08303 162 AEY---------NATHYRLSVFYDLAKTSVNRLAFSLAHELA--PHGATAVALT 204 (305)
T ss_pred ccc---------cCcCCCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEec
Confidence 211 000111122455655555567777888774 4556554443
No 453
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=95.24 E-value=0.087 Score=50.59 Aligned_cols=72 Identities=14% Similarity=0.063 Sum_probs=51.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
..+++|||+ |..|..-+..+..-..+.+|.++|++. ....+.++.+. ....+... .+.++++++||+|+.+.
T Consensus 117 a~~l~iiGa-G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~-~~~~v~~~---~~~~eav~~aDIV~taT 190 (301)
T PRK06407 117 VENFTIIGS-GFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKE-FGVDIRPV---DNAEAALRDADTITSIT 190 (301)
T ss_pred CcEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHh-cCCcEEEe---CCHHHHHhcCCEEEEec
Confidence 348999998 999888877776654578999999986 33444455432 12234443 46789999999999754
No 454
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.24 E-value=0.075 Score=55.00 Aligned_cols=66 Identities=23% Similarity=0.317 Sum_probs=47.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
....+|+|+|. |.+|+.+|..+..-|. ++..||.........++ . +.. ..++++.+++||+|++..
T Consensus 136 l~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~---g----~~~---~~~l~ell~~aDvV~l~l 201 (525)
T TIGR01327 136 LYGKTLGVIGL-GRIGSIVAKRAKAFGM--KVLAYDPYISPERAEQL---G----VEL---VDDLDELLARADFITVHT 201 (525)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc---C----CEE---cCCHHHHHhhCCEEEEcc
Confidence 34468999998 9999999999987776 99999974322122211 1 111 135789999999999974
No 455
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=95.24 E-value=0.072 Score=50.62 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=43.6
Q ss_pred EEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 51 VLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 51 IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
|||. |.+|..++..|+..+. +|.++|++... ..++.... ... +.++.+++++||+||++.
T Consensus 1 ~IGl-G~mG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~g----~~~---~~s~~~~~~~advVil~v 60 (288)
T TIGR01692 1 FIGL-GNMGGPMAANLLKAGH--PVRVFDLFPDA--VEEAVAAG----AQA---AASPAEAAEGADRVITML 60 (288)
T ss_pred CCcc-cHhHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 5798 9999999999999887 89999987521 22233211 111 245678899999999985
No 456
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.23 E-value=1.2 Score=41.34 Aligned_cols=158 Identities=13% Similarity=0.106 Sum_probs=80.7
Q ss_pred CCEEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEE----eCCCcHH-------hh
Q 018265 46 GFKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGF----LGQQQLE-------DA 111 (358)
Q Consensus 46 ~~KI~IiGa~--G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~----~~t~d~~-------~a 111 (358)
...++|+||+ +.+|..++..|++.|. .+++.+++. ......++.+......+..+ +...+.+ +.
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGA--KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 3478999985 6899999999999987 888887643 11111122111000111111 0011111 22
Q ss_pred hCCCCEEEEcCCCCCC-----C--CCCHHh---HHHHHHHHHHHHHHHHHhh-CCCeEEEEecCCCCccHHHHHHHHHHh
Q 018265 112 LTGMDIVIIPAGVPRK-----P--GMTRDD---LFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKKV 180 (358)
Q Consensus 112 l~~aDiVIi~ag~~~~-----~--g~~r~~---~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP~d~~t~~~~~~~~~~ 180 (358)
+...|++|+.+|.... + ..+..+ .+..|......+.+.+..+ .+.+.|++++.-....
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------- 153 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER----------- 153 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----------
Confidence 3457999999886421 1 122222 2334444333333333222 1347777776543221
Q ss_pred CCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEE
Q 018265 181 GTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVV 219 (358)
Q Consensus 181 ~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~ 219 (358)
+.|..-.|+.+...-..|-+.+|..+. +..|++..+
T Consensus 154 -~~~~~~~Y~asKaal~~l~~~la~el~--~~gIrvn~v 189 (257)
T PRK08594 154 -VVQNYNVMGVAKASLEASVKYLANDLG--KDGIRVNAI 189 (257)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhh--hcCCEEeee
Confidence 122223456665555567777887774 345554444
No 457
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.18 E-value=0.11 Score=50.16 Aligned_cols=71 Identities=15% Similarity=0.214 Sum_probs=47.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
..+|+|||+ |.+|...+..+.......+|.++|++. ....+.++.+. ...+... .+.++++++||+|+.+.
T Consensus 125 ~~~v~iiG~-G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~--g~~~~~~---~~~~~av~~aDIVi~aT 197 (314)
T PRK06141 125 ASRLLVVGT-GRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQ--GFDAEVV---TDLEAAVRQADIISCAT 197 (314)
T ss_pred CceEEEECC-cHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhc--CCceEEe---CCHHHHHhcCCEEEEee
Confidence 459999998 999999987665532245999999876 33334444332 1123332 46778999999996654
No 458
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.13 E-value=0.22 Score=44.76 Aligned_cols=36 Identities=17% Similarity=0.362 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
+..||+|+|+ |.+|+.++..|+..|+ ..|+++|.+.
T Consensus 20 ~~s~VlIiG~-gglG~evak~La~~GV-g~i~lvD~d~ 55 (197)
T cd01492 20 RSARILLIGL-KGLGAEIAKNLVLSGI-GSLTILDDRT 55 (197)
T ss_pred HhCcEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence 3458999998 8899999999999986 5899999874
No 459
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.09 E-value=0.25 Score=44.68 Aligned_cols=71 Identities=18% Similarity=0.122 Sum_probs=47.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGV 124 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~ 124 (358)
..||+|+|+ |.+|..-+..|+..|- .|++++.+.. ....++.... .+.......+ .+.+.++|+||.+.+.
T Consensus 9 gk~vlVvGg-G~va~rk~~~Ll~~ga--~VtVvsp~~~-~~l~~l~~~~---~i~~~~~~~~-~~dl~~~~lVi~at~d 79 (205)
T TIGR01470 9 GRAVLVVGG-GDVALRKARLLLKAGA--QLRVIAEELE-SELTLLAEQG---GITWLARCFD-ADILEGAFLVIAATDD 79 (205)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCC--EEEEEcCCCC-HHHHHHHHcC---CEEEEeCCCC-HHHhCCcEEEEECCCC
Confidence 459999999 9999999999998886 8999987542 2222333221 2333222223 3568999999988543
No 460
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.08 E-value=0.075 Score=52.77 Aligned_cols=76 Identities=14% Similarity=0.186 Sum_probs=45.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCC-CCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-TNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~-~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
.++||+|+||+|.+|..+...|...+.. +|.++..+...|....-.+.. .......+. ..+ .+.++++|+||++.+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~-el~~l~s~~saG~~i~~~~~~l~~~~~~~~~-~~~-~~~~~~~DvVf~Alp 113 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDF-EITVMTADRKAGQSFGSVFPHLITQDLPNLV-AVK-DADFSDVDAVFCCLP 113 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCC-eEEEEEChhhcCCCchhhCccccCcccccee-cCC-HHHhcCCCEEEEcCC
Confidence 4569999999999999999998887533 888887654223221111100 001111110 112 234799999999753
No 461
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.05 E-value=0.14 Score=49.16 Aligned_cols=97 Identities=20% Similarity=0.268 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
....+|+|+|- |.||+.++..+..-|. ++..+|..... +. .... ..++++.++.||+|++...
T Consensus 120 L~gktvgIiG~-G~IG~~vA~~l~afG~--~V~~~~r~~~~-------~~-----~~~~--~~~l~ell~~aDiv~~~lp 182 (303)
T PRK06436 120 LYNKSLGILGY-GGIGRRVALLAKAFGM--NIYAYTRSYVN-------DG-----ISSI--YMEPEDIMKKSDFVLISLP 182 (303)
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcc-------cC-----cccc--cCCHHHHHhhCCEEEECCC
Confidence 34569999998 9999999987766576 99999975311 00 0000 1357899999999999753
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec--CCCCccH
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS--NPVNSTV 170 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NP~d~~t 170 (358)
.. + +++ .++. .+.+....|.+++||++ .++|.-+
T Consensus 183 ~t--~-~T~--------~li~--~~~l~~mk~ga~lIN~sRG~~vd~~a 218 (303)
T PRK06436 183 LT--D-ETR--------GMIN--SKMLSLFRKGLAIINVARADVVDKND 218 (303)
T ss_pred CC--c-hhh--------cCcC--HHHHhcCCCCeEEEECCCccccCHHH
Confidence 21 1 111 1111 22333334789999986 6666543
No 462
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.03 E-value=0.05 Score=52.43 Aligned_cols=70 Identities=14% Similarity=0.215 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCC-CcEEEEEeCC-CchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPL-VSVLHLYDVV-NTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~-~~el~L~D~~-~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
..++|+| ||+|.||..+...|.++++ .+++.|++.. ...|....+. ...+....- + ++++++.|++++ +
T Consensus 2 ~~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i~f~----g~~~~V~~l--~-~~~f~~vDia~f-a 72 (322)
T PRK06901 2 ATLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGIRFN----NKAVEQIAP--E-EVEWADFNYVFF-A 72 (322)
T ss_pred CcceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEEEEC----CEEEEEEEC--C-ccCcccCCEEEE-c
Confidence 4579999 9999999999999988875 6789999876 3333222121 123333221 2 356899999999 6
Q ss_pred C
Q 018265 123 G 123 (358)
Q Consensus 123 g 123 (358)
|
T Consensus 73 g 73 (322)
T PRK06901 73 G 73 (322)
T ss_pred C
Confidence 5
No 463
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.02 E-value=0.095 Score=54.27 Aligned_cols=66 Identities=23% Similarity=0.302 Sum_probs=47.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
...++|+|+|. |.+|+.++..+..-|. +|+.||.........++ .+.. .++++.++.||+|++...
T Consensus 138 l~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~-------g~~~----~~l~ell~~aDiV~l~lP 203 (526)
T PRK13581 138 LYGKTLGIIGL-GRIGSEVAKRAKAFGM--KVIAYDPYISPERAAQL-------GVEL----VSLDELLARADFITLHTP 203 (526)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc-------CCEE----EcHHHHHhhCCEEEEccC
Confidence 34568999998 9999999999987776 99999975322111111 1121 147889999999999753
No 464
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.02 E-value=0.053 Score=53.03 Aligned_cols=71 Identities=25% Similarity=0.503 Sum_probs=47.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCC-C-CcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~-~-~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
.+||+|+||+|.+|..+...|...+ + ..+|.++......|....+.. ..+... ..|. +.++++|+|+++++
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~----~~l~v~--~~~~-~~~~~~Divf~a~~ 77 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG----REIIIQ--EAKI-NSFEGVDIAFFSAG 77 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC----cceEEE--eCCH-HHhcCCCEEEECCC
Confidence 4699999999999999999998544 3 346888876553343332221 123332 1243 55789999999764
No 465
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.71 Score=43.53 Aligned_cols=34 Identities=32% Similarity=0.440 Sum_probs=30.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVV 81 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~ 81 (358)
...+.|+||++.+|..++..|+..|. .++++|.+
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~--~vii~~~~ 39 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGA--RVVVNDIG 39 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEeeCC
Confidence 45899999999999999999999887 88888865
No 466
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=95.00 E-value=0.12 Score=50.27 Aligned_cols=80 Identities=23% Similarity=0.294 Sum_probs=52.8
Q ss_pred ccccccccccCCCCCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcH
Q 018265 29 ESSGLGRMDCRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQL 108 (358)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~ 108 (358)
..+.|.+..-+. .....++|+|||. |.||+.++..+..-|. +|..||......... .+. +. .-.++
T Consensus 126 ~~g~W~~~~~~g-~el~gkTvGIiG~-G~IG~~va~~l~afgm--~v~~~d~~~~~~~~~--~~~-----~~---~~~~L 191 (324)
T COG0111 126 RRGEWDRKAFRG-TELAGKTVGIIGL-GRIGRAVAKRLKAFGM--KVIGYDPYSPRERAG--VDG-----VV---GVDSL 191 (324)
T ss_pred HcCCcccccccc-ccccCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEECCCCchhhhc--ccc-----ce---ecccH
Confidence 445677622211 1233569999998 9999999999988887 999999843111111 111 11 12457
Q ss_pred HhhhCCCCEEEEcC
Q 018265 109 EDALTGMDIVIIPA 122 (358)
Q Consensus 109 ~~al~~aDiVIi~a 122 (358)
++-++.||||++..
T Consensus 192 d~lL~~sDiv~lh~ 205 (324)
T COG0111 192 DELLAEADILTLHL 205 (324)
T ss_pred HHHHhhCCEEEEcC
Confidence 89999999999964
No 467
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=94.93 E-value=0.61 Score=45.46 Aligned_cols=126 Identities=19% Similarity=0.246 Sum_probs=73.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCC-CCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGFLGQQQLEDALTG-MDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~-aDiVIi~ag 123 (358)
..+|+|+|+ |-+|.......+..+. +++.+|+++ ....+.+|. ...-+.. . ..|.-+++++ +|+||.+++
T Consensus 167 G~~V~I~G~-GGlGh~avQ~Aka~ga--~Via~~~~~~K~e~a~~lG---Ad~~i~~-~-~~~~~~~~~~~~d~ii~tv~ 238 (339)
T COG1064 167 GKWVAVVGA-GGLGHMAVQYAKAMGA--EVIAITRSEEKLELAKKLG---ADHVINS-S-DSDALEAVKEIADAIIDTVG 238 (339)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC--eEEEEeCChHHHHHHHHhC---CcEEEEc-C-CchhhHHhHhhCcEEEECCC
Confidence 469999999 8888887777776674 999999986 333445442 1111211 1 2233344444 999999975
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCC-Cc-cH-HHHHHHHHHhCCCCCCcEEEee---eccHH
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV-NS-TV-PIAAEVFKKVGTYDPKRLLGVT---MLDVV 197 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~-d~-~t-~~~~~~~~~~~~~p~~kviG~t---~lds~ 197 (358)
+ .-+.+..+.+ .+.+.++.+.+|- .. .. .+. .- -+...+|.|.. .-|+.
T Consensus 239 -~---------------~~~~~~l~~l---~~~G~~v~vG~~~~~~~~~~~~~----~l--i~~~~~i~GS~~g~~~d~~ 293 (339)
T COG1064 239 -P---------------ATLEPSLKAL---RRGGTLVLVGLPGGGPIPLLPAF----LL--ILKEISIVGSLVGTRADLE 293 (339)
T ss_pred -h---------------hhHHHHHHHH---hcCCEEEEECCCCCcccCCCCHH----Hh--hhcCeEEEEEecCCHHHHH
Confidence 3 1223333334 4788999999994 33 21 111 11 13456888883 34554
Q ss_pred HHHHHHH
Q 018265 198 RANTFVA 204 (358)
Q Consensus 198 R~~~~lA 204 (358)
.+..+.+
T Consensus 294 e~l~f~~ 300 (339)
T COG1064 294 EALDFAA 300 (339)
T ss_pred HHHHHHH
Confidence 4444443
No 468
>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]
Probab=94.90 E-value=0.39 Score=46.47 Aligned_cols=100 Identities=20% Similarity=0.353 Sum_probs=58.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHHhC----CC-CcEEEEEeCCC-chh---HHHHHhcCC-----C------CCeEEEE
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMKIN----PL-VSVLHLYDVVN-TPG---VTADISHMD-----T------NAVVRGF 102 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~~~----~~-~~el~L~D~~~-~~g---~~~dl~~~~-----~------~~~v~~~ 102 (358)
.+.+.||+|||+ |+=|++++..+... +. ..+|...-..+ ..+ ...|.-... + ++.+.
T Consensus 18 ~~~~~kV~ivGs-GnWGsaiaki~~~n~~~~~~f~~~Vrmwv~ee~i~~~~~~L~eiIN~~heN~KYlpg~~lP~Nvv-- 94 (372)
T KOG2711|consen 18 ERDPLKVCIVGS-GNWGSAIAKIVGENVKEFPIFDPQVRMWVFEEEINGEAEKLTEIINSRHENVKYLPGIKLPENVV-- 94 (372)
T ss_pred hcCceEEEEEcc-ChHHHHHHHHHhhhhhhccccCceeeEEEeccccCChhHHHHHHhccccccccccCCccCCCCeE--
Confidence 344579999998 99999999877653 11 12333332222 222 222221111 1 12333
Q ss_pred eCCCcHHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhC-CCeEEEEe
Q 018265 103 LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI 162 (358)
Q Consensus 103 ~~t~d~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~ 162 (358)
..+|+.+|++|||++|+.. | -..+.+++++|..+- |++..|-.
T Consensus 95 -Av~dl~ea~~dADilvf~v--P--------------hQf~~~ic~~l~g~vk~~~~aISL 138 (372)
T KOG2711|consen 95 -AVPDLVEAAKDADILVFVV--P--------------HQFIPRICEQLKGYVKPGATAISL 138 (372)
T ss_pred -ecchHHHHhccCCEEEEeC--C--------------hhhHHHHHHHHhcccCCCCeEEEe
Confidence 3579999999999999973 3 244566777777665 55554443
No 469
>PRK07877 hypothetical protein; Provisional
Probab=94.89 E-value=0.13 Score=55.00 Aligned_cols=75 Identities=23% Similarity=0.406 Sum_probs=50.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-----c-------------hhH--HHHHhcCCCCCeEEEEeC-
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----T-------------PGV--TADISHMDTNAVVRGFLG- 104 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-----~-------------~g~--~~dl~~~~~~~~v~~~~~- 104 (358)
..||+|+|+ | +|++++..|+..|++.+|.|+|-|. + +.. +..+.....+..+..+..
T Consensus 107 ~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~ 184 (722)
T PRK07877 107 RLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDG 184 (722)
T ss_pred cCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEecc
Confidence 469999999 9 9999999999999877999999875 1 011 112222222334444321
Q ss_pred --CCcHHhhhCCCCEEEEcC
Q 018265 105 --QQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 105 --t~d~~~al~~aDiVIi~a 122 (358)
..+..+-++++|+||-+.
T Consensus 185 i~~~n~~~~l~~~DlVvD~~ 204 (722)
T PRK07877 185 LTEDNVDAFLDGLDVVVEEC 204 (722)
T ss_pred CCHHHHHHHhcCCCEEEECC
Confidence 235666678999999874
No 470
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.88 E-value=0.15 Score=49.40 Aligned_cols=73 Identities=15% Similarity=0.205 Sum_probs=49.7
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
..+++|||+ |..|...+..+.....+.+|.+++++. ....+.++.+.. ...+.. ..++++++.+||+||.+..
T Consensus 129 ~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~-g~~v~~---~~~~~~av~~aDiVvtaT~ 203 (326)
T TIGR02992 129 SSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLL-GIDVTA---ATDPRAAMSGADIIVTTTP 203 (326)
T ss_pred CcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhc-CceEEE---eCCHHHHhccCCEEEEecC
Confidence 358999998 999988888886433356899999876 333344443211 122322 3578899999999998743
No 471
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=94.87 E-value=0.16 Score=46.99 Aligned_cols=112 Identities=15% Similarity=0.129 Sum_probs=58.7
Q ss_pred EEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhH--H-HHHhcCC--------CCCeEEEEeCC----------Cc
Q 018265 51 VLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGV--T-ADISHMD--------TNAVVRGFLGQ----------QQ 107 (358)
Q Consensus 51 IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~--~-~dl~~~~--------~~~~v~~~~~t----------~d 107 (358)
|+||+||+|+++...|+..+...+|+++-+... .+. . ..+.+.. ...+++.+.+. .+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 689999999999998887764227777765441 111 1 0111110 02345544321 23
Q ss_pred HHhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecC
Q 018265 108 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 164 (358)
Q Consensus 108 ~~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 164 (358)
+.+..+.+|+||++|+.-. ......++...|+...+++++...+.... .++.+|.
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~-~~~~~~~~~~~NV~gt~~ll~la~~~~~~-~~~~iST 135 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVN-FNAPYSELRAVNVDGTRNLLRLAAQGKRK-RFHYIST 135 (249)
T ss_dssp HHHHHHH--EEEE--SS-S-BS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEE
T ss_pred hhccccccceeeecchhhh-hcccchhhhhhHHHHHHHHHHHHHhccCc-ceEEecc
Confidence 4444489999999987432 12234446788999999999999854433 5555544
No 472
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.85 E-value=0.07 Score=51.71 Aligned_cols=73 Identities=25% Similarity=0.220 Sum_probs=46.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcC--CCCCeEEEEeCCCcHHh-hhCCCCEEEEc
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTNAVVRGFLGQQQLED-ALTGMDIVIIP 121 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~--~~~~~v~~~~~t~d~~~-al~~aDiVIi~ 121 (358)
++||+|+||+|..|..+...|...+.. |+.++...+..|....-.+. .....++.. ..|.++ ...+||+||++
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v-e~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~--~~~~~~~~~~~~DvvFla 77 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDV-ELILISSRERAGKPVSDVHPNLRGLVDLPFQ--TIDPEKIELDECDVVFLA 77 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCe-EEEEeechhhcCCchHHhCcccccccccccc--cCChhhhhcccCCEEEEe
Confidence 579999999999999999999888644 78888776534433322211 111122221 123333 24569999997
No 473
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=94.81 E-value=0.064 Score=52.31 Aligned_cols=72 Identities=24% Similarity=0.291 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~-~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
+.+||+|+||+|.+|..+...|.... ...+|.++-.+...|.-..+.. ..+.... .+ +.++.++|+||++.+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~----~~~~v~~--~~-~~~~~~~Dvvf~a~p 75 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGG----KSVTVQD--AA-EFDWSQAQLAFFVAG 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECC----cceEEEe--Cc-hhhccCCCEEEECCC
Confidence 45799999999999999999998853 2458888866543333222221 1233211 12 244589999999764
No 474
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.80 E-value=0.35 Score=41.88 Aligned_cols=67 Identities=10% Similarity=0.089 Sum_probs=43.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+..||.|+|| |.||...+..|...|. ++++++.+... ...++. ...+.. ..-. ++.+.++|+||.+.
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga--~V~VIsp~~~~-~l~~l~----~i~~~~--~~~~-~~dl~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGA--FVTVVSPEICK-EMKELP----YITWKQ--KTFS-NDDIKDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCccCH-HHHhcc----CcEEEe--cccC-hhcCCCceEEEECC
Confidence 4459999999 9999999999998887 88999743222 222221 111111 1112 35589999999874
No 475
>PRK07041 short chain dehydrogenase; Provisional
Probab=94.79 E-value=0.21 Score=45.00 Aligned_cols=108 Identities=15% Similarity=0.178 Sum_probs=60.1
Q ss_pred EEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEe----CCCcHHhhhC---CCCEEEE
Q 018265 50 AVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFL----GQQQLEDALT---GMDIVII 120 (358)
Q Consensus 50 ~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~----~t~d~~~al~---~aDiVIi 120 (358)
.|+||+|.+|+.++..|++.|. +|++++++. ......++... ..+..+. ...++.++++ ..|++|+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA--RVTIASRSRDRLAAAARALGGG---APVRTAALDITDEAAVDAFFAEAGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 3899999999999999999887 899999865 12222223211 1122111 1123333343 3699999
Q ss_pred cCCCCCCC---CCC---HHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 121 PAGVPRKP---GMT---RDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 121 ~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
.+|..... ..+ -...+..|+.....+.+.. .....+.+++++
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~-~~~~~g~iv~~s 123 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAA-RIAPGGSLTFVS 123 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhh-hhcCCeEEEEEC
Confidence 98864221 111 2233455666555565522 223345555543
No 476
>PRK07589 ornithine cyclodeaminase; Validated
Probab=94.77 E-value=0.15 Score=50.03 Aligned_cols=71 Identities=18% Similarity=0.287 Sum_probs=49.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~--~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
..+++|||+ |..+...+..+..--.+.+|.++|++. ....+.++.+. ...+.. ..+.++++++||+|+.+.
T Consensus 129 a~~l~iiGa-G~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~--~~~v~~---~~~~~~av~~ADIIvtaT 201 (346)
T PRK07589 129 SRTMALIGN-GAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP--GLRIVA---CRSVAEAVEGADIITTVT 201 (346)
T ss_pred CcEEEEECC-cHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc--CCcEEE---eCCHHHHHhcCCEEEEec
Confidence 358999998 998887776665443467999999986 33444555431 123433 257899999999999864
No 477
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=94.76 E-value=0.079 Score=48.90 Aligned_cols=74 Identities=16% Similarity=0.181 Sum_probs=48.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCCCC
Q 018265 47 FKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAGVP 125 (358)
Q Consensus 47 ~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag~~ 125 (358)
|+|.|+||+|++|+++...|+..+. +++..-++......+ . ...............+..+++|.|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~--~v~~~~r~~~~~~~~--~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGH--EVRAAVRNPEAAAAL--A-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCC--EEEEEEeCHHHHHhh--c-CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence 5899999999999999999998876 777665554222222 2 111011111222356778899999999987644
No 478
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.75 E-value=0.22 Score=39.82 Aligned_cols=64 Identities=19% Similarity=0.250 Sum_probs=43.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
+..+|.|||+ |.+|..-+..|+..|- ++.++.... ... ... ..+.. ..+++.+.++|+|+.+.+
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA--~v~vis~~~---~~~--~~~---i~~~~----~~~~~~l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGA--KVTVISPEI---EFS--EGL---IQLIR----REFEEDLDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTB--EEEEEESSE---HHH--HTS---CEEEE----SS-GGGCTTESEEEE-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCch---hhh--hhH---HHHHh----hhHHHHHhhheEEEecCC
Confidence 4559999999 9999999999999885 999998753 111 111 12221 235677999999998753
No 479
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=94.74 E-value=0.15 Score=50.44 Aligned_cols=62 Identities=16% Similarity=0.217 Sum_probs=45.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
...++|+|||. |.||+.++..+..-|. ++..+|..... . .. ... ..++++.++.||+|++..
T Consensus 114 L~gktvGIIG~-G~IG~~vA~~l~a~G~--~V~~~dp~~~~-~----~~-----~~~----~~~L~ell~~sDiI~lh~ 175 (378)
T PRK15438 114 LHDRTVGIVGV-GNVGRRLQARLEALGI--KTLLCDPPRAD-R----GD-----EGD----FRSLDELVQEADILTFHT 175 (378)
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCcccc-c----cc-----ccc----cCCHHHHHhhCCEEEEeC
Confidence 34569999998 9999999999987777 99999963211 0 00 001 135788899999999854
No 480
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=94.70 E-value=0.17 Score=51.97 Aligned_cols=151 Identities=18% Similarity=0.209 Sum_probs=81.8
Q ss_pred cCCCCCCCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHHhcCCCCCeEEEE-----------eCC
Q 018265 38 CRAKGGSPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTNAVVRGF-----------LGQ 105 (358)
Q Consensus 38 ~~~~~~~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~-~~g~~~dl~~~~~~~~v~~~-----------~~t 105 (358)
-++.+..++.||+|+|+ |.+|...+..+...|- +|+.+|.+. ....+..+.- .+..+... ..+
T Consensus 157 ~taaG~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA--~V~a~D~~~~rle~aeslGA--~~v~i~~~e~~~~~~gya~~~s 231 (509)
T PRK09424 157 ITAAGKVPPAKVLVIGA-GVAGLAAIGAAGSLGA--IVRAFDTRPEVAEQVESMGA--EFLELDFEEEGGSGDGYAKVMS 231 (509)
T ss_pred eeccCCcCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCC--eEEEeccccccccccchhhhcc
Confidence 34556677889999998 9999999988888886 799999976 3333333211 00001000 001
Q ss_pred CcH--------HhhhCCCCEEEEcCCCCCCCCCCHHhHHHHHHHH-HHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHH
Q 018265 106 QQL--------EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGI-VKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEV 176 (358)
Q Consensus 106 ~d~--------~~al~~aDiVIi~ag~~~~~g~~r~~~~~~N~~i-~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~ 176 (358)
.++ .+.++++|+||.++|.|.++. -.. .++..+.++ |.+.|+.++.+-+-.+.+ +.-
T Consensus 232 ~~~~~~~~~~~~~~~~gaDVVIetag~pg~~a----------P~lit~~~v~~mk---pGgvIVdvg~~~GG~~e~-t~~ 297 (509)
T PRK09424 232 EEFIKAEMALFAEQAKEVDIIITTALIPGKPA----------PKLITAEMVASMK---PGSVIVDLAAENGGNCEL-TVP 297 (509)
T ss_pred hhHHHHHHHHHHhccCCCCEEEECCCCCcccC----------cchHHHHHHHhcC---CCCEEEEEccCCCCCccc-ccC
Confidence 121 222468999999999874321 122 244444444 788888777643221110 000
Q ss_pred HHHhCCCCCCcEEEeeeccHHHHHHHHHHHhC
Q 018265 177 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLG 208 (358)
Q Consensus 177 ~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~ 208 (358)
.........-.++|.+++++ ++....++.+.
T Consensus 298 ~~~v~~~~gVti~Gv~n~P~-~~p~~As~lla 328 (509)
T PRK09424 298 GEVVVTDNGVTIIGYTDLPS-RLPTQSSQLYG 328 (509)
T ss_pred ccceEeECCEEEEEeCCCch-hHHHHHHHHHH
Confidence 00110002236678776764 55544444443
No 481
>PLN02306 hydroxypyruvate reductase
Probab=94.67 E-value=0.25 Score=49.15 Aligned_cols=103 Identities=20% Similarity=0.262 Sum_probs=58.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHH-hCCCCcEEEEEeCCCchhHH---HHHhcC---CCCCeEEEEeCCCcHHhhhCCCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTPGVT---ADISHM---DTNAVVRGFLGQQQLEDALTGMD 116 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~-~~~~~~el~L~D~~~~~g~~---~dl~~~---~~~~~v~~~~~t~d~~~al~~aD 116 (358)
....+|+|+|. |.||+.+|..+. .-|. +|..||........ ..+... ......... ...++++.++.||
T Consensus 163 L~gktvGIiG~-G~IG~~vA~~l~~~fGm--~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~L~ell~~sD 238 (386)
T PLN02306 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKM--NLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWK-RASSMEEVLREAD 238 (386)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCC--EEEEECCCCchhhhhhhhhhccccccccccccccc-ccCCHHHHHhhCC
Confidence 34569999998 999999999875 3355 89999975421111 011100 000011111 1247899999999
Q ss_pred EEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 117 IVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 117 iVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
+|++..-.. + + |-.++.. +.+....|++++||++
T Consensus 239 iV~lh~Plt--~-~--------T~~lin~--~~l~~MK~ga~lIN~a 272 (386)
T PLN02306 239 VISLHPVLD--K-T--------TYHLINK--ERLALMKKEAVLVNAS 272 (386)
T ss_pred EEEEeCCCC--h-h--------hhhhcCH--HHHHhCCCCeEEEECC
Confidence 999964221 1 1 1111111 2333344789999986
No 482
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.67 E-value=0.16 Score=53.73 Aligned_cols=137 Identities=16% Similarity=0.217 Sum_probs=80.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcH----HhhhCCCCEEEEc
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQL----EDALTGMDIVIIP 121 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~----~~al~~aDiVIi~ 121 (358)
..+|.|+|. |.+|+.++..|...+. +++++|.|+.. +..+.+.. ..-+.+ ..+|. +.-+++||.||++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g-~~v~~G--Dat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGV--KMTVLDHDPDH--IETLRKFG-MKVFYG--DATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhcC-CeEEEE--eCCCHHHHHhcCCCcCCEEEEE
Confidence 468999998 9999999999998887 89999988622 22222221 122222 11232 1234689999988
Q ss_pred CCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec-CCCCccHHHHHHHHHHhCCCCCCcEEEeeeccHHHHH
Q 018265 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRAN 200 (358)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NP~d~~t~~~~~~~~~~~~~p~~kviG~t~lds~R~~ 200 (358)
...+ ..|. .++..+++..|+..++.-+ |+.+. +.+++. |. +.++--+.-.+.++-
T Consensus 472 ~~d~-----------~~n~----~i~~~ar~~~p~~~iiaRa~d~~~~------~~L~~~-Ga--d~v~~e~~e~sl~l~ 527 (621)
T PRK03562 472 IDDP-----------QTSL----QLVELVKEHFPHLQIIARARDVDHY------IRLRQA-GV--EKPERETFEGALKSG 527 (621)
T ss_pred eCCH-----------HHHH----HHHHHHHHhCCCCeEEEEECCHHHH------HHHHHC-CC--CEEehhhHhHHHHHH
Confidence 4321 3343 3555666667887766544 44321 123333 32 344433554555666
Q ss_pred HHHHHHhCCCCCCC
Q 018265 201 TFVAEVLGLDPREV 214 (358)
Q Consensus 201 ~~lA~~l~v~~~~v 214 (358)
+.+-+.+|++++++
T Consensus 528 ~~~L~~lg~~~~~~ 541 (621)
T PRK03562 528 RLVLESLGLGPYEA 541 (621)
T ss_pred HHHHHHcCCCHHHH
Confidence 66667778776444
No 483
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.61 E-value=0.19 Score=43.72 Aligned_cols=57 Identities=30% Similarity=0.465 Sum_probs=41.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
.+..||+|||.+..||..++.+|..++. .+.+.+.. |.|+++-++.||+||..+|
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~a--tVt~~h~~-----------------------T~~l~~~~~~ADIVVsa~G 88 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGA--TVTICHSK-----------------------TKNLQEITRRADIVVSAVG 88 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT---EEEEE-TT-----------------------SSSHHHHHTTSSEEEE-SS
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCC--eEEeccCC-----------------------CCcccceeeeccEEeeeec
Confidence 3455999999988899999999998865 55555432 3466788999999999988
Q ss_pred CC
Q 018265 124 VP 125 (358)
Q Consensus 124 ~~ 125 (358)
.|
T Consensus 89 ~~ 90 (160)
T PF02882_consen 89 KP 90 (160)
T ss_dssp ST
T ss_pred cc
Confidence 65
No 484
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.60 E-value=0.17 Score=50.05 Aligned_cols=34 Identities=29% Similarity=0.548 Sum_probs=30.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVV 81 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~ 81 (358)
..||+|+|+ |.+|+.++..|+..|+ .+|.|+|.+
T Consensus 135 ~~~VlvvG~-GG~Gs~ia~~La~~Gv-g~i~lvD~d 168 (376)
T PRK08762 135 EARVLLIGA-GGLGSPAALYLAAAGV-GTLGIVDHD 168 (376)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCC
Confidence 458999998 9999999999999886 489999987
No 485
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=94.59 E-value=0.15 Score=50.61 Aligned_cols=61 Identities=20% Similarity=0.189 Sum_probs=45.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
...+|+|||. |.||+.++..+..-|. ++..+|..... . .. ... ..++++.+++||+|++..
T Consensus 115 ~gktvGIIG~-G~IG~~va~~l~a~G~--~V~~~Dp~~~~---~--~~-----~~~----~~~l~ell~~aDiV~lh~ 175 (381)
T PRK00257 115 AERTYGVVGA-GHVGGRLVRVLRGLGW--KVLVCDPPRQE---A--EG-----DGD----FVSLERILEECDVISLHT 175 (381)
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCcccc---c--cc-----Ccc----ccCHHHHHhhCCEEEEeC
Confidence 4568999998 9999999999987777 99999974311 0 00 011 135788899999999974
No 486
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.55 E-value=0.18 Score=49.61 Aligned_cols=35 Identities=31% Similarity=0.506 Sum_probs=31.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
..||+|+|+ |.+|+.++..|+..|+ .+|.++|.+.
T Consensus 28 ~~~VlivG~-GGlGs~~a~~La~~Gv-g~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGA-GGLGSPALLYLAGAGV-GHITIIDDDT 62 (355)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 358999998 9999999999999887 4899999875
No 487
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=94.54 E-value=0.24 Score=48.05 Aligned_cols=94 Identities=18% Similarity=0.106 Sum_probs=57.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHHH-hCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEc
Q 018265 43 GSPGFKVAVLGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIP 121 (358)
Q Consensus 43 ~~~~~KI~IiGa~G~vG~~~a~~l~-~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ 121 (358)
.....+|+|||. |.||..++..+. .-|. +|+.+|.........++ .+.. .++++.++.||+|++.
T Consensus 142 ~L~gktvGIiG~-G~IG~~va~~l~~~fgm--~V~~~~~~~~~~~~~~~-------~~~~----~~l~ell~~sDvv~lh 207 (323)
T PRK15409 142 DVHHKTLGIVGM-GRIGMALAQRAHFGFNM--PILYNARRHHKEAEERF-------NARY----CDLDTLLQESDFVCII 207 (323)
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHhcCCC--EEEEECCCCchhhHHhc-------CcEe----cCHHHHHHhCCEEEEe
Confidence 345679999998 999999998876 3444 88888864311111101 1111 2578999999999997
Q ss_pred CCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEec
Q 018265 122 AGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 163 (358)
Q Consensus 122 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 163 (358)
.... + .|-.++. .+.+.+..|++++||++
T Consensus 208 ~plt--~---------~T~~li~--~~~l~~mk~ga~lIN~a 236 (323)
T PRK15409 208 LPLT--D---------ETHHLFG--AEQFAKMKSSAIFINAG 236 (323)
T ss_pred CCCC--h---------HHhhccC--HHHHhcCCCCeEEEECC
Confidence 4321 1 1111111 11233334899999986
No 488
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=94.53 E-value=0.45 Score=44.94 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
..||+|+|+ |.||+.++..|+..|+ .+|.|+|.+.
T Consensus 30 ~s~VlVvG~-GGVGs~vae~Lar~GV-g~itLiD~D~ 64 (268)
T PRK15116 30 DAHICVVGI-GGVGSWAAEALARTGI-GAITLIDMDD 64 (268)
T ss_pred CCCEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence 448999998 9999999999999986 4899999874
No 489
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=94.51 E-value=0.32 Score=46.40 Aligned_cols=75 Identities=19% Similarity=0.276 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc-------------------hhH--HHHHhcCCCCCeEEEEe
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-------------------PGV--TADISHMDTNAVVRGFL 103 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~-------------------~g~--~~dl~~~~~~~~v~~~~ 103 (358)
...||.|+|+ |.+|+.++..|+..|+ ..|.|+|.+.. +++ ...|........+....
T Consensus 18 ~~s~VLIvG~-gGLG~EiaKnLalaGV-g~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~ 95 (286)
T cd01491 18 QKSNVLISGL-GGLGVEIAKNLILAGV-KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVST 95 (286)
T ss_pred hcCcEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 3458999998 9999999999999987 48999998740 011 11222222233444443
Q ss_pred CCCcHHhhhCCCCEEEEcC
Q 018265 104 GQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 104 ~t~d~~~al~~aDiVIi~a 122 (358)
...+ ++-+.+.|+||.+.
T Consensus 96 ~~~~-~~~l~~fdvVV~~~ 113 (286)
T cd01491 96 GPLT-TDELLKFQVVVLTD 113 (286)
T ss_pred ccCC-HHHHhcCCEEEEec
Confidence 3323 46789999998884
No 490
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=94.50 E-value=0.27 Score=49.03 Aligned_cols=35 Identities=26% Similarity=0.469 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 82 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~ 82 (358)
..||+|+|+ |.+|+.++..|+..|+. +|.|+|.+.
T Consensus 42 ~~~VlviG~-GGlGs~va~~La~~Gvg-~i~lvD~D~ 76 (392)
T PRK07878 42 NARVLVIGA-GGLGSPTLLYLAAAGVG-TLGIVEFDV 76 (392)
T ss_pred cCCEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCE
Confidence 458999998 99999999999998864 899999874
No 491
>PRK06823 ornithine cyclodeaminase; Validated
Probab=94.50 E-value=0.24 Score=47.95 Aligned_cols=71 Identities=10% Similarity=0.098 Sum_probs=49.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
..+++|+|+ |..+..-+..+..-..+.+|.++|++.. ...+..+.+. ...+... .+.++++++||+|+.+.
T Consensus 128 ~~~l~iiG~-G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~--~~~v~~~---~~~~~av~~ADIV~taT 200 (315)
T PRK06823 128 VSAIGIVGT-GIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL--GFAVNTT---LDAAEVAHAANLIVTTT 200 (315)
T ss_pred CCEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc--CCcEEEE---CCHHHHhcCCCEEEEec
Confidence 459999998 9998888877766545689999999872 2233333322 2234332 46789999999999864
No 492
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.49 E-value=0.13 Score=48.94 Aligned_cols=57 Identities=23% Similarity=0.410 Sum_probs=44.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
.+..+|+|+|++|.+|..++..|+..+. ++.+++.. +.++.+.+++||+||.+.|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga--tVtv~~~~-----------------------t~~L~~~~~~aDIvI~AtG 211 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA--TVTICHSR-----------------------TQNLPELVKQADIIVGAVG 211 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC--EEEEEeCC-----------------------chhHHHHhccCCEEEEccC
Confidence 3456999999944599999999988876 88888631 1345677899999999986
Q ss_pred CC
Q 018265 124 VP 125 (358)
Q Consensus 124 ~~ 125 (358)
.|
T Consensus 212 ~~ 213 (283)
T PRK14192 212 KP 213 (283)
T ss_pred CC
Confidence 44
No 493
>PLN00203 glutamyl-tRNA reductase
Probab=94.44 E-value=0.38 Score=49.74 Aligned_cols=122 Identities=16% Similarity=0.146 Sum_probs=70.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
....||+|||+ |.+|..++..|...|. .+|++++++..... .+........+... ...++.+++.+||+||.+.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~-~~V~V~nRs~era~--~La~~~~g~~i~~~-~~~dl~~al~~aDVVIsAT~ 338 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGC-TKMVVVNRSEERVA--ALREEFPDVEIIYK-PLDEMLACAAEADVVFTSTS 338 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCC-CeEEEEeCCHHHHH--HHHHHhCCCceEee-cHhhHHHHHhcCCEEEEccC
Confidence 34569999998 9999999998887774 47999998752222 22211001112221 12456788999999998755
Q ss_pred CCCCCCCCHHhHHHHHHHHHHHHHHHHHhh----CCCeEEEEecCCCCccHHHHHHHHHHhCCCCCCcEEEe
Q 018265 124 VPRKPGMTRDDLFNINAGIVKTLCEGIAKC----CPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 191 (358)
Q Consensus 124 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNP~d~~t~~~~~~~~~~~~~p~~kviG~ 191 (358)
.+.. -+..+..+.+.+. ...-++|-++.|=|+-.. ...+|.-.+|-+
T Consensus 339 s~~p-------------vI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdIdp~--------v~~l~~v~lydi 389 (519)
T PLN00203 339 SETP-------------LFLKEHVEALPPASDTVGGKRLFVDISVPRNVGAC--------VSELESARVYNV 389 (519)
T ss_pred CCCC-------------eeCHHHHHHhhhcccccCCCeEEEEeCCCCCCccc--------cccCCCCeEEEe
Confidence 4321 1122333333211 112367778999887632 224554455555
No 494
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.44 E-value=0.12 Score=49.12 Aligned_cols=74 Identities=12% Similarity=0.177 Sum_probs=47.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcC
Q 018265 45 PGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPA 122 (358)
Q Consensus 45 ~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~--~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~a 122 (358)
+..+++|+|+ |.+|.+++..|...|. .+|.+++++.. +..+.++... ..+.......++.+.+.++|+||.+.
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~-~~i~I~nRt~~ka~~La~~~~~~---~~~~~~~~~~~~~~~~~~~DiVInaT 198 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGV-TDITVINRNPDKLSRLVDLGVQV---GVITRLEGDSGGLAIEKAAEVLVSTV 198 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhhhc---CcceeccchhhhhhcccCCCEEEECC
Confidence 4568999998 9999999999998775 48999998752 2222233211 11222111123345678999999975
Q ss_pred C
Q 018265 123 G 123 (358)
Q Consensus 123 g 123 (358)
.
T Consensus 199 p 199 (282)
T TIGR01809 199 P 199 (282)
T ss_pred C
Confidence 4
No 495
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.41 E-value=0.64 Score=43.05 Aligned_cols=156 Identities=15% Similarity=0.192 Sum_probs=81.0
Q ss_pred CCEEEEEcCC--CchHHHHHHHHHhCCCCcEEEEEeCCCc----hhHHHHHhcCCCCCe-EEE-EeCCCcHH-------h
Q 018265 46 GFKVAVLGAA--GGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTNAV-VRG-FLGQQQLE-------D 110 (358)
Q Consensus 46 ~~KI~IiGa~--G~vG~~~a~~l~~~~~~~el~L~D~~~~----~g~~~dl~~~~~~~~-v~~-~~~t~d~~-------~ 110 (358)
...+.|+||+ +.+|..++..|+..|. ++++.+.+.. .....++........ +.. .+...+.+ +
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~G~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAAGA--ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 3478999985 5899999999999887 7877764321 112222322111000 100 00011111 2
Q ss_pred hhCCCCEEEEcCCCCCC-----C--CCCH---HhHHHHHH----HHHHHHHHHHHhhCCCeEEEEecCCCCccHHHHHHH
Q 018265 111 ALTGMDIVIIPAGVPRK-----P--GMTR---DDLFNINA----GIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEV 176 (358)
Q Consensus 111 al~~aDiVIi~ag~~~~-----~--g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP~d~~t~~~~~~ 176 (358)
.+...|++|+.+|.... + ..+. ...+..|+ .+.+.+.+.+++ .+.|++++......
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~------- 153 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVR------- 153 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEecccccc-------
Confidence 23468999999986431 1 1112 12233343 344555555543 46777766533211
Q ss_pred HHHhCCCCCCcEEEeeeccHHHHHHHHHHHhCCCCCCCceEEEE
Q 018265 177 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG 220 (358)
Q Consensus 177 ~~~~~~~p~~kviG~t~lds~R~~~~lA~~l~v~~~~v~~~v~G 220 (358)
+.|..-.++.+.-.-..+-+.++..++ +..|++..+-
T Consensus 154 -----~~~~~~~Y~asKaal~~l~~~la~el~--~~gI~Vn~i~ 190 (258)
T PRK07370 154 -----AIPNYNVMGVAKAALEASVRYLAAELG--PKNIRVNAIS 190 (258)
T ss_pred -----CCcccchhhHHHHHHHHHHHHHHHHhC--cCCeEEEEEe
Confidence 233333456655444567777887775 4556554443
No 496
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=94.39 E-value=0.13 Score=50.28 Aligned_cols=33 Identities=30% Similarity=0.401 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCCCcEE-EEEe
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPLVSVL-HLYD 79 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~~~el-~L~D 79 (358)
++||+|+||+|.+|..++..|...+.. ++ .+.|
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~-elv~v~~ 35 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEV-EIVAVTS 35 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEEC
Confidence 479999999999999999988876544 55 5566
No 497
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=94.36 E-value=0.53 Score=44.28 Aligned_cols=95 Identities=16% Similarity=0.146 Sum_probs=61.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHhCCC-CcEEEE-EeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhh-hCCCCEEEEcC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKINPL-VSVLHL-YDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDA-LTGMDIVIIPA 122 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~~~~-~~el~L-~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~a-l~~aDiVIi~a 122 (358)
.+||+|||. |.+|..++..|..... ..+++. +|.+. ....++... ... .+|+++. ..+.|+||.+|
T Consensus 2 ~~rvgiIG~-GaIG~~va~~l~~~~~~~~~l~~V~~~~~--~~~~~~~~~-----~~~---~~~l~~ll~~~~DlVVE~A 70 (267)
T PRK13301 2 THRIAFIGL-GAIASDVAAGLLADAAQPCQLAALTRNAA--DLPPALAGR-----VAL---LDGLPGLLAWRPDLVVEAA 70 (267)
T ss_pred ceEEEEECc-cHHHHHHHHHHhcCCCCceEEEEEecCCH--HHHHHhhcc-----Ccc---cCCHHHHhhcCCCEEEECC
Confidence 369999998 9999999998876532 125444 44432 222333321 112 2456563 48899999998
Q ss_pred CCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 018265 123 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (358)
Q Consensus 123 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 167 (358)
+ ...++++++.+-+.+.|-.++-++-=.|
T Consensus 71 ~----------------~~av~e~~~~iL~~g~dlvv~SvGALaD 99 (267)
T PRK13301 71 G----------------QQAIAEHAEGCLTAGLDMIICSAGALAD 99 (267)
T ss_pred C----------------HHHHHHHHHHHHhcCCCEEEEChhHhcC
Confidence 6 4788899999988777765554443344
No 498
>PRK13529 malate dehydrogenase; Provisional
Probab=94.33 E-value=0.3 Score=50.52 Aligned_cols=105 Identities=19% Similarity=0.318 Sum_probs=70.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHh----CCCC-----cEEEEEeCCC--ch------hHHHHHhcCCCCCeEEEE---eCC
Q 018265 46 GFKVAVLGAAGGIGQPLAMLMKI----NPLV-----SVLHLYDVVN--TP------GVTADISHMDTNAVVRGF---LGQ 105 (358)
Q Consensus 46 ~~KI~IiGa~G~vG~~~a~~l~~----~~~~-----~el~L~D~~~--~~------g~~~dl~~~~~~~~v~~~---~~t 105 (358)
..||++.|| |..|-.++..|.. .|+- ..++++|.+. .. .....+.+.. ...... ...
T Consensus 295 d~riv~~GA-GsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~--~~~~~~~~~~~~ 371 (563)
T PRK13529 295 DQRIVFLGA-GSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKR--EELADWDTEGDV 371 (563)
T ss_pred hcEEEEECC-CHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhc--ccccccccccCC
Confidence 369999999 9999999988875 4653 5899999875 11 1111122110 111100 112
Q ss_pred CcHHhhhCCC--CEEEEcCCCCCCCCCCHHhHHHHHHHHHHHHHHHHHhhCCCeEEEEecCCCC
Q 018265 106 QQLEDALTGM--DIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 167 (358)
Q Consensus 106 ~d~~~al~~a--DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP~d 167 (358)
.++.++++++ |+.|=+.+.+ | -+-+++.+.|.+++++.+|+-.|||..
T Consensus 372 ~~L~e~v~~~kPtvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt~ 421 (563)
T PRK13529 372 ISLLEVVRNVKPTVLIGVSGQP---G-----------AFTEEIVKEMAAHCERPIIFPLSNPTS 421 (563)
T ss_pred CCHHHHHhccCCCEEEEecCCC---C-----------CCCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 5789999999 9888765543 2 234677888888998999888899996
No 499
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=94.33 E-value=0.16 Score=50.91 Aligned_cols=75 Identities=20% Similarity=0.186 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHHhcCCCCCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 44 SPGFKVAVLGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTNAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 44 ~~~~KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~D~~~~~g~~~dl~~~~~~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
.+..||+|+|+ |.+|..++..|...|. .+|.+++++..+ +..|........+.. ..++.+.+.+||+||.+.+
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~-~~I~V~nRt~~r--a~~La~~~~~~~~~~---~~~l~~~l~~aDiVI~aT~ 251 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAP-KQIMLANRTIEK--AQKITSAFRNASAHY---LSELPQLIKKADIIIAAVN 251 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCC-CEEEEECCCHHH--HHHHHHHhcCCeEec---HHHHHHHhccCCEEEECcC
Confidence 44568999998 9999999999988775 389999886422 222322110011111 2456788999999999877
Q ss_pred CC
Q 018265 124 VP 125 (358)
Q Consensus 124 ~~ 125 (358)
.|
T Consensus 252 a~ 253 (414)
T PRK13940 252 VL 253 (414)
T ss_pred CC
Confidence 65
No 500
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.31 E-value=0.39 Score=39.24 Aligned_cols=72 Identities=25% Similarity=0.321 Sum_probs=39.0
Q ss_pred EEEEEcCCCchHHHHHHHHHhCCCCcEEEEE-eCCCchhHHHHHhcCCC-CCeEEEEeCCCcHHhhhCCCCEEEEcCC
Q 018265 48 KVAVLGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNTPGVTADISHMDT-NAVVRGFLGQQQLEDALTGMDIVIIPAG 123 (358)
Q Consensus 48 KI~IiGa~G~vG~~~a~~l~~~~~~~el~L~-D~~~~~g~~~dl~~~~~-~~~v~~~~~t~d~~~al~~aDiVIi~ag 123 (358)
||+|+|++|.+|..++..+...+.+ ++.-+ +.+...+......+... ......+ ...+++ ..++|+||++.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~-~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~~ 74 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDF-EVVALAASARSAGKRVSEAGPHLKGEVVLEL-EPEDFE--ELAVDIVFLALP 74 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCc-eEEEEEechhhcCcCHHHHCccccccccccc-ccCChh--hcCCCEEEEcCC
Confidence 6899998799999999988886433 44444 65432222211121110 0001111 113332 359999999853
Done!