Query 018271
Match_columns 358
No_of_seqs 326 out of 2796
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 07:35:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018271.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018271hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 4.1E-31 8.9E-36 257.4 25.9 312 17-351 244-566 (591)
2 PRK11273 glpT sn-glycerol-3-ph 99.8 2.8E-17 6.1E-22 158.8 28.9 198 139-351 248-449 (452)
3 TIGR01299 synapt_SV2 synaptic 99.8 2.3E-18 5E-23 173.1 20.1 137 185-342 601-738 (742)
4 PRK11663 regulatory protein Uh 99.8 1.1E-16 2.4E-21 153.9 27.0 178 140-333 239-420 (434)
5 COG2271 UhpC Sugar phosphate p 99.8 7.9E-18 1.7E-22 154.0 17.6 186 137-339 245-436 (448)
6 PRK10642 proline/glycine betai 99.8 7.9E-17 1.7E-21 157.3 24.6 168 154-340 260-432 (490)
7 PRK09556 uhpT sugar phosphate 99.8 4.4E-16 9.6E-21 151.1 27.4 192 139-337 253-449 (467)
8 TIGR00887 2A0109 phosphate:H+ 99.8 5.4E-17 1.2E-21 159.0 21.0 183 153-345 297-496 (502)
9 KOG2504 Monocarboxylate transp 99.7 3.1E-17 6.8E-22 158.9 16.7 184 138-337 292-476 (509)
10 TIGR00892 2A0113 monocarboxyla 99.7 3.2E-16 6.9E-21 151.6 23.7 180 139-332 236-416 (455)
11 PRK11551 putative 3-hydroxyphe 99.7 5.9E-16 1.3E-20 147.3 25.2 172 146-335 222-394 (406)
12 PRK09705 cynX putative cyanate 99.7 1.1E-15 2.5E-20 145.0 25.9 184 140-342 201-386 (393)
13 TIGR00893 2A0114 d-galactonate 99.7 1.1E-15 2.4E-20 143.7 25.1 187 136-334 207-396 (399)
14 COG2814 AraJ Arabinose efflux 99.7 1.8E-16 3.8E-21 146.6 18.2 176 144-338 13-189 (394)
15 TIGR00712 glpT glycerol-3-phos 99.7 1.8E-15 4E-20 145.6 25.4 188 139-341 246-437 (438)
16 TIGR00890 2A0111 Oxalate/Forma 99.7 1.7E-15 3.8E-20 141.7 24.5 175 137-330 198-375 (377)
17 TIGR00903 2A0129 major facilit 99.7 1.9E-15 4.2E-20 141.9 24.1 176 137-333 185-361 (368)
18 PRK09952 shikimate transporter 99.7 6.6E-15 1.4E-19 141.8 27.1 178 140-335 245-431 (438)
19 TIGR00879 SP MFS transporter, 99.7 2.6E-16 5.7E-21 151.9 16.2 178 145-341 285-474 (481)
20 PRK10406 alpha-ketoglutarate t 99.7 1.2E-14 2.5E-19 139.8 27.2 181 136-335 234-422 (432)
21 PRK10489 enterobactin exporter 99.7 3E-15 6.4E-20 143.2 22.0 186 137-342 217-404 (417)
22 PRK11663 regulatory protein Uh 99.7 8.5E-16 1.8E-20 147.7 18.2 173 145-336 24-197 (434)
23 TIGR00889 2A0110 nucleoside tr 99.7 2.9E-15 6.3E-20 143.3 21.3 191 137-340 201-405 (418)
24 PLN00028 nitrate transmembrane 99.7 1.7E-15 3.8E-20 147.2 19.6 186 137-337 245-433 (476)
25 PRK03545 putative arabinose tr 99.7 1.5E-15 3.3E-20 143.9 18.3 172 145-335 10-182 (390)
26 TIGR02332 HpaX 4-hydroxyphenyl 99.7 4.4E-15 9.5E-20 141.8 21.1 182 145-339 9-191 (412)
27 PRK03699 putative transporter; 99.7 5.9E-14 1.3E-18 133.2 28.5 174 144-337 205-380 (394)
28 PRK12307 putative sialic acid 99.7 2.9E-14 6.4E-19 136.5 26.5 160 136-302 220-385 (426)
29 TIGR00898 2A0119 cation transp 99.7 2.5E-15 5.4E-20 147.2 19.3 182 135-341 314-498 (505)
30 PRK10504 putative transporter; 99.7 3.4E-15 7.3E-20 145.0 19.9 174 144-336 10-184 (471)
31 TIGR00902 2A0127 phenyl propri 99.7 2.8E-14 6E-19 135.0 24.9 173 137-330 198-372 (382)
32 PRK10091 MFS transport protein 99.7 2.4E-15 5.3E-20 142.2 17.6 173 144-335 3-176 (382)
33 TIGR00897 2A0118 polyol permea 99.7 8.4E-14 1.8E-18 132.6 27.8 180 137-336 215-400 (402)
34 PRK10077 xylE D-xylose transpo 99.7 9E-15 2E-19 142.2 21.5 168 161-347 288-467 (479)
35 TIGR01299 synapt_SV2 synaptic 99.7 6.2E-15 1.4E-19 148.5 20.8 183 143-332 162-350 (742)
36 PRK03545 putative arabinose tr 99.7 6E-14 1.3E-18 132.9 26.4 179 137-336 198-379 (390)
37 COG2223 NarK Nitrate/nitrite t 99.7 3.9E-15 8.5E-20 136.5 17.2 185 136-339 210-403 (417)
38 PRK10213 nepI ribonucleoside t 99.7 6E-15 1.3E-19 140.1 19.0 156 156-330 32-188 (394)
39 COG2271 UhpC Sugar phosphate p 99.7 6.6E-16 1.4E-20 141.5 11.6 175 145-338 30-207 (448)
40 PRK09528 lacY galactoside perm 99.7 1.3E-14 2.8E-19 138.9 20.7 181 137-336 216-402 (420)
41 TIGR02332 HpaX 4-hydroxyphenyl 99.7 6.2E-15 1.3E-19 140.8 18.1 168 142-326 240-410 (412)
42 TIGR00710 efflux_Bcr_CflA drug 99.7 5E-15 1.1E-19 139.5 17.3 165 156-339 17-182 (385)
43 PF11700 ATG22: Vacuole efflux 99.7 8.9E-14 1.9E-18 134.2 26.2 185 135-335 272-466 (477)
44 PRK10054 putative transporter; 99.6 9E-15 1.9E-19 138.9 18.9 176 144-339 7-184 (395)
45 TIGR00894 2A0114euk Na(+)-depe 99.6 9.1E-15 2E-19 141.8 19.2 190 136-336 253-449 (465)
46 PRK14995 methyl viologen resis 99.6 9.2E-15 2E-19 142.9 19.3 174 146-338 8-183 (495)
47 TIGR00900 2A0121 H+ Antiporter 99.6 4.7E-15 1E-19 138.3 15.4 171 147-336 2-178 (365)
48 TIGR00883 2A0106 metabolite-pr 99.6 6.6E-14 1.4E-18 131.8 23.3 172 138-327 211-391 (394)
49 TIGR00711 efflux_EmrB drug res 99.6 5E-15 1.1E-19 144.1 16.1 174 147-339 5-179 (485)
50 PF07690 MFS_1: Major Facilita 99.6 2.9E-15 6.4E-20 139.1 13.0 165 150-333 2-168 (352)
51 TIGR00891 2A0112 putative sial 99.6 3.3E-14 7.2E-19 134.7 20.4 168 145-329 13-181 (405)
52 TIGR00924 yjdL_sub1_fam amino 99.6 2.5E-14 5.4E-19 139.0 19.8 170 144-332 10-187 (475)
53 PRK11551 putative 3-hydroxyphe 99.6 2.2E-14 4.9E-19 136.5 19.1 174 147-339 18-192 (406)
54 TIGR00893 2A0114 d-galactonate 99.6 3.6E-15 7.7E-20 140.2 13.3 159 160-337 10-169 (399)
55 KOG0569 Permease of the major 99.6 3.3E-14 7.3E-19 135.3 19.5 197 133-349 254-466 (485)
56 PRK10473 multidrug efflux syst 99.6 1.8E-14 3.9E-19 136.6 17.8 171 150-339 9-180 (392)
57 PRK15403 multidrug efflux syst 99.6 2.7E-14 5.9E-19 136.4 19.1 164 157-339 29-193 (413)
58 TIGR00881 2A0104 phosphoglycer 99.6 3.2E-14 6.9E-19 133.3 18.8 163 136-302 208-374 (379)
59 TIGR00903 2A0129 major facilit 99.6 2.5E-14 5.5E-19 134.4 17.7 162 158-339 5-167 (368)
60 TIGR00891 2A0112 putative sial 99.6 1E-13 2.2E-18 131.4 21.6 138 159-303 253-393 (405)
61 PLN00028 nitrate transmembrane 99.6 8.3E-14 1.8E-18 135.5 21.4 178 148-336 40-218 (476)
62 TIGR00899 2A0120 sugar efflux 99.6 4.2E-13 9E-18 126.1 25.3 174 140-333 195-370 (375)
63 PRK09874 drug efflux system pr 99.6 6.5E-14 1.4E-18 133.2 19.7 175 144-338 14-194 (408)
64 TIGR00900 2A0121 H+ Antiporter 99.6 2E-13 4.3E-18 127.3 22.6 159 137-302 203-365 (365)
65 PRK12307 putative sialic acid 99.6 7E-14 1.5E-18 133.9 20.0 160 146-324 20-180 (426)
66 PRK03699 putative transporter; 99.6 8.9E-14 1.9E-18 132.0 20.5 171 144-332 7-178 (394)
67 PRK09874 drug efflux system pr 99.6 2.3E-13 5E-18 129.4 23.3 178 139-335 213-396 (408)
68 PRK11010 ampG muropeptide tran 99.6 5.3E-13 1.1E-17 130.3 26.2 181 137-336 215-402 (491)
69 PRK09584 tppB putative tripept 99.6 1.3E-13 2.7E-18 134.9 21.8 176 139-333 15-197 (500)
70 PRK11652 emrD multidrug resist 99.6 7.5E-14 1.6E-18 132.4 19.4 175 146-339 10-185 (394)
71 TIGR00895 2A0115 benzoate tran 99.6 3.8E-14 8.3E-19 133.7 17.2 163 156-337 29-192 (398)
72 PRK15075 citrate-proton sympor 99.6 9.6E-13 2.1E-17 126.6 27.1 155 141-302 234-396 (434)
73 PRK15402 multidrug efflux syst 99.6 7.6E-14 1.7E-18 132.9 19.1 161 159-338 28-189 (406)
74 PRK05122 major facilitator sup 99.6 6E-13 1.3E-17 126.4 25.1 157 159-336 231-388 (399)
75 TIGR00886 2A0108 nitrite extru 99.6 5.5E-14 1.2E-18 131.7 17.6 181 145-335 2-186 (366)
76 TIGR00881 2A0104 phosphoglycer 99.6 5E-15 1.1E-19 138.7 10.5 167 153-338 4-172 (379)
77 COG2807 CynX Cyanate permease 99.6 1.1E-12 2.3E-17 118.3 24.6 178 138-332 202-380 (395)
78 TIGR00896 CynX cyanate transpo 99.6 4E-13 8.8E-18 125.6 23.0 159 138-303 191-351 (355)
79 PRK03893 putative sialic acid 99.6 3.1E-13 6.8E-18 132.1 22.8 150 162-330 293-446 (496)
80 TIGR00712 glpT glycerol-3-phos 99.6 4.5E-14 9.8E-19 136.0 16.5 177 144-339 27-208 (438)
81 PRK03633 putative MFS family t 99.6 1.4E-12 3E-17 123.3 26.3 172 138-330 194-365 (381)
82 TIGR00890 2A0111 Oxalate/Forma 99.6 2.6E-14 5.6E-19 133.8 14.3 162 156-337 15-177 (377)
83 cd06174 MFS The Major Facilita 99.6 1.7E-13 3.6E-18 126.8 19.6 169 147-334 2-171 (352)
84 PRK10207 dipeptide/tripeptide 99.6 1.8E-13 3.9E-18 133.2 20.4 168 144-330 14-187 (489)
85 TIGR02718 sider_RhtX_FptX side 99.6 1.5E-12 3.3E-17 123.3 26.3 176 137-331 201-385 (390)
86 PRK11102 bicyclomycin/multidru 99.6 6.4E-14 1.4E-18 131.9 16.7 160 161-339 8-168 (377)
87 PRK11646 multidrug resistance 99.6 1.5E-13 3.2E-18 130.8 19.2 170 147-336 13-184 (400)
88 PRK03893 putative sialic acid 99.6 1.3E-13 2.7E-18 134.8 19.2 161 145-324 21-182 (496)
89 COG2814 AraJ Arabinose efflux 99.6 1.8E-12 4E-17 120.1 25.6 180 137-337 204-386 (394)
90 PRK15462 dipeptide/tripeptide 99.6 2.3E-13 4.9E-18 131.3 20.4 171 144-332 9-184 (493)
91 PRK15034 nitrate/nitrite trans 99.6 1.8E-13 3.9E-18 130.7 19.4 185 136-339 244-456 (462)
92 PRK11273 glpT sn-glycerol-3-ph 99.6 1.5E-13 3.2E-18 132.9 19.2 158 163-339 48-210 (452)
93 TIGR00895 2A0115 benzoate tran 99.6 9.5E-14 2.1E-18 131.0 17.0 147 144-297 250-397 (398)
94 PRK11043 putative transporter; 99.6 2.1E-13 4.7E-18 129.6 19.0 160 158-336 20-180 (401)
95 PRK10213 nepI ribonucleoside t 99.6 5.4E-12 1.2E-16 119.9 28.1 173 138-330 210-384 (394)
96 PRK10091 MFS transport protein 99.6 2.6E-12 5.6E-17 121.5 25.5 177 140-336 195-375 (382)
97 PRK15011 sugar efflux transpor 99.6 3.5E-12 7.5E-17 121.1 26.4 159 156-334 228-388 (393)
98 PRK11195 lysophospholipid tran 99.6 1.4E-13 3.1E-18 130.6 16.7 165 143-330 2-167 (393)
99 TIGR01272 gluP glucose/galacto 99.6 6.5E-12 1.4E-16 115.3 27.0 165 139-324 135-302 (310)
100 PRK11128 putative 3-phenylprop 99.5 2.7E-12 5.7E-17 121.4 24.9 174 136-330 197-372 (382)
101 TIGR00897 2A0118 polyol permea 99.5 1.9E-13 4.1E-18 130.1 17.1 170 145-332 14-188 (402)
102 TIGR00882 2A0105 oligosacchari 99.5 1.5E-12 3.3E-17 123.6 23.2 180 136-334 207-392 (396)
103 KOG1330 Sugar transporter/spin 99.5 2.4E-15 5.2E-20 139.1 3.6 178 147-342 36-214 (493)
104 PRK15034 nitrate/nitrite trans 99.5 9.2E-13 2E-17 125.9 21.2 187 144-337 34-232 (462)
105 TIGR00892 2A0113 monocarboxyla 99.5 2.8E-13 6E-18 131.1 17.9 155 162-336 37-193 (455)
106 PRK09556 uhpT sugar phosphate 99.5 9.3E-14 2E-18 134.9 14.7 159 162-336 47-211 (467)
107 PRK12382 putative transporter; 99.5 3.4E-12 7.3E-17 121.0 25.0 154 161-335 233-387 (392)
108 cd06174 MFS The Major Facilita 99.5 3.2E-12 6.9E-17 118.2 24.3 171 144-333 175-348 (352)
109 PRK09705 cynX putative cyanate 99.5 6E-13 1.3E-17 126.4 19.6 150 161-329 26-176 (393)
110 PRK10489 enterobactin exporter 99.5 1.4E-13 3E-18 131.6 14.9 178 137-333 10-193 (417)
111 KOG0253 Synaptic vesicle trans 99.5 3.1E-13 6.7E-18 121.6 15.4 137 186-343 388-525 (528)
112 TIGR00792 gph sugar (Glycoside 99.5 8.4E-12 1.8E-16 119.9 26.3 159 136-302 214-382 (437)
113 KOG2532 Permease of the major 99.5 6.1E-13 1.3E-17 127.7 17.5 194 133-337 247-447 (466)
114 PRK12382 putative transporter; 99.5 5.2E-13 1.1E-17 126.6 16.7 163 143-324 14-186 (392)
115 PRK10077 xylE D-xylose transpo 99.5 1E-12 2.2E-17 127.8 17.4 148 175-333 51-211 (479)
116 TIGR00879 SP MFS transporter, 99.5 4.4E-13 9.5E-18 129.4 14.6 153 161-332 45-212 (481)
117 PRK10504 putative transporter; 99.5 2.2E-11 4.7E-16 118.4 26.5 158 138-302 255-417 (471)
118 PRK05122 major facilitator sup 99.5 1.4E-12 3.1E-17 123.8 17.8 167 143-328 14-190 (399)
119 PRK11646 multidrug resistance 99.5 2E-11 4.4E-16 116.2 25.5 181 137-331 201-382 (400)
120 PRK15402 multidrug efflux syst 99.5 1.7E-11 3.8E-16 116.7 24.8 158 137-302 208-372 (406)
121 PRK03633 putative MFS family t 99.5 2.4E-12 5.2E-17 121.6 18.6 152 143-301 5-157 (381)
122 PRK06814 acylglycerophosphoeth 99.5 9.4E-12 2E-16 133.6 23.7 179 136-332 217-417 (1140)
123 PRK09528 lacY galactoside perm 99.5 2.4E-12 5.3E-17 123.2 17.3 176 139-336 5-190 (420)
124 PRK10642 proline/glycine betai 99.5 8.3E-12 1.8E-16 122.0 21.3 172 146-328 18-204 (490)
125 PRK11902 ampG muropeptide tran 99.5 4.7E-11 1E-15 113.7 25.9 174 136-332 201-385 (402)
126 TIGR00899 2A0120 sugar efflux 99.5 2.8E-12 6.1E-17 120.4 17.2 169 152-338 5-177 (375)
127 TIGR00894 2A0114euk Na(+)-depe 99.5 5.1E-13 1.1E-17 129.6 12.5 146 173-337 70-219 (465)
128 PRK08633 2-acyl-glycerophospho 99.5 3E-11 6.6E-16 129.7 26.8 180 136-333 224-406 (1146)
129 TIGR00710 efflux_Bcr_CflA drug 99.4 7.7E-11 1.7E-15 111.0 25.2 154 137-298 199-359 (385)
130 PF03825 Nuc_H_symport: Nucleo 99.4 1.2E-10 2.6E-15 110.3 26.0 188 137-337 200-395 (400)
131 TIGR00882 2A0105 oligosacchari 99.4 7.8E-12 1.7E-16 118.7 17.8 171 143-335 1-181 (396)
132 TIGR00885 fucP L-fucose:H+ sym 99.4 1.6E-11 3.5E-16 117.1 19.9 181 145-332 4-202 (410)
133 PRK10406 alpha-ketoglutarate t 99.4 2.3E-11 5E-16 116.9 21.0 158 153-329 31-211 (432)
134 PF01306 LacY_symp: LacY proto 99.4 7.3E-11 1.6E-15 110.6 23.0 184 136-338 212-401 (412)
135 COG2270 Permeases of the major 99.4 3.9E-12 8.5E-17 117.0 14.1 180 136-333 244-425 (438)
136 PF06609 TRI12: Fungal trichot 99.4 8.7E-12 1.9E-16 121.9 17.0 178 142-340 38-220 (599)
137 PTZ00207 hypothetical protein; 99.4 1.2E-11 2.6E-16 121.5 17.9 158 158-337 41-205 (591)
138 TIGR00901 2A0125 AmpG-related 99.4 4E-11 8.6E-16 112.1 20.7 141 137-283 199-355 (356)
139 TIGR00806 rfc RFC reduced fola 99.4 2.1E-11 4.6E-16 115.2 18.6 157 163-337 45-203 (511)
140 PRK09952 shikimate transporter 99.4 6.7E-11 1.5E-15 114.0 22.4 171 146-328 24-211 (438)
141 PRK15011 sugar efflux transpor 99.4 2.2E-11 4.8E-16 115.6 18.3 178 143-339 14-196 (393)
142 TIGR00887 2A0109 phosphate:H+ 99.4 3.1E-11 6.6E-16 118.4 19.7 150 176-332 53-220 (502)
143 PRK10054 putative transporter; 99.4 4.5E-11 9.8E-16 113.6 20.2 175 138-332 200-379 (395)
144 TIGR00902 2A0127 phenyl propri 99.4 8.9E-12 1.9E-16 117.8 15.2 160 147-325 7-167 (382)
145 TIGR00880 2_A_01_02 Multidrug 99.4 3.7E-12 8E-17 101.7 10.6 132 186-336 5-137 (141)
146 PRK10133 L-fucose transporter; 99.4 8.4E-11 1.8E-15 113.2 21.9 170 137-327 251-423 (438)
147 PRK15075 citrate-proton sympor 99.4 6.2E-11 1.3E-15 114.0 20.9 159 146-323 17-198 (434)
148 TIGR00898 2A0119 cation transp 99.4 3.5E-12 7.7E-17 125.0 12.1 147 165-333 110-260 (505)
149 PF07690 MFS_1: Major Facilita 99.4 1.4E-11 3.1E-16 114.3 15.5 148 137-291 199-352 (352)
150 TIGR00711 efflux_EmrB drug res 99.4 6.5E-11 1.4E-15 115.2 20.8 157 138-301 249-411 (485)
151 KOG4686 Predicted sugar transp 99.4 5.8E-12 1.2E-16 109.7 11.7 153 143-303 263-417 (459)
152 TIGR00896 CynX cyanate transpo 99.4 2.7E-11 5.8E-16 113.3 16.7 151 161-329 17-167 (355)
153 PRK14995 methyl viologen resis 99.4 2.3E-10 4.9E-15 112.1 23.9 156 138-300 253-413 (495)
154 PRK10133 L-fucose transporter; 99.4 7E-11 1.5E-15 113.8 20.0 147 145-298 27-177 (438)
155 KOG3764 Vesicular amine transp 99.4 2.9E-12 6.2E-17 116.6 9.6 149 173-340 100-250 (464)
156 TIGR00805 oat sodium-independe 99.4 2.2E-12 4.7E-17 129.3 9.8 166 162-334 51-278 (633)
157 PRK11010 ampG muropeptide tran 99.4 6.7E-11 1.5E-15 115.5 19.8 180 141-335 9-193 (491)
158 PRK11102 bicyclomycin/multidru 99.4 4.3E-10 9.3E-15 105.8 24.6 151 137-295 187-344 (377)
159 PRK10473 multidrug efflux syst 99.4 4E-10 8.7E-15 106.8 24.4 152 138-302 197-351 (392)
160 PRK11902 ampG muropeptide tran 99.4 4.1E-11 8.8E-16 114.1 17.6 166 152-332 7-177 (402)
161 PRK09848 glucuronide transport 99.3 4.6E-10 9.9E-15 108.5 24.9 159 137-302 221-390 (448)
162 TIGR00885 fucP L-fucose:H+ sym 99.3 5.9E-10 1.3E-14 106.5 25.3 174 138-326 226-401 (410)
163 PRK11043 putative transporter; 99.3 8.1E-10 1.8E-14 105.0 26.2 158 136-301 195-358 (401)
164 PF05977 MFS_3: Transmembrane 99.3 4.2E-11 9.2E-16 116.9 17.2 176 138-332 4-185 (524)
165 PRK11128 putative 3-phenylprop 99.3 3.2E-11 7E-16 114.0 15.8 159 153-330 13-172 (382)
166 COG2223 NarK Nitrate/nitrite t 99.3 3.4E-11 7.4E-16 110.8 14.8 176 144-337 14-193 (417)
167 KOG2533 Permease of the major 99.3 6.8E-11 1.5E-15 114.1 17.6 152 133-286 262-417 (495)
168 PRK06814 acylglycerophosphoeth 99.3 7.5E-11 1.6E-15 126.7 19.1 174 139-331 6-189 (1140)
169 KOG0252 Inorganic phosphate tr 99.3 6.6E-12 1.4E-16 116.2 9.1 182 146-347 306-507 (538)
170 PRK11195 lysophospholipid tran 99.3 9.2E-10 2E-14 104.5 23.7 176 138-334 199-377 (393)
171 PRK08633 2-acyl-glycerophospho 99.3 1.2E-10 2.6E-15 125.2 18.3 155 139-300 4-165 (1146)
172 PF00083 Sugar_tr: Sugar (and 99.3 3.7E-15 8.1E-20 143.9 -15.0 263 45-349 170-448 (451)
173 PF05977 MFS_3: Transmembrane 99.3 6E-10 1.3E-14 108.9 21.0 179 137-334 211-391 (524)
174 TIGR00901 2A0125 AmpG-related 99.3 2E-10 4.2E-15 107.4 16.6 169 162-338 6-179 (356)
175 COG0738 FucP Fucose permease [ 99.3 2.5E-09 5.5E-14 98.1 22.8 158 136-302 228-386 (422)
176 PRK09669 putative symporter Ya 99.3 4.5E-09 9.8E-14 101.4 26.0 160 136-302 221-390 (444)
177 TIGR00886 2A0108 nitrite extru 99.2 3.8E-10 8.3E-15 105.6 17.8 142 137-285 218-365 (366)
178 PF13347 MFS_2: MFS/sugar tran 99.2 2.7E-09 5.9E-14 102.5 23.9 159 136-302 217-386 (428)
179 COG3104 PTR2 Dipeptide/tripept 99.2 2.2E-10 4.7E-15 107.9 15.0 176 144-337 21-206 (498)
180 KOG0254 Predicted transporter 99.2 4.2E-10 9.2E-15 110.6 17.8 141 180-339 90-231 (513)
181 TIGR01301 GPH_sucrose GPH fami 99.2 3E-10 6.5E-15 109.3 16.3 189 149-340 9-221 (477)
182 PRK10429 melibiose:sodium symp 99.2 1.3E-08 2.8E-13 99.1 27.7 159 137-302 224-395 (473)
183 KOG2532 Permease of the major 99.2 2.1E-10 4.6E-15 110.2 14.9 147 173-338 67-217 (466)
184 PRK11652 emrD multidrug resist 99.2 9.8E-09 2.1E-13 97.4 25.3 156 137-300 200-360 (394)
185 KOG0254 Predicted transporter 99.2 6.1E-10 1.3E-14 109.5 17.4 187 144-350 295-496 (513)
186 KOG2615 Permease of the major 99.2 1E-10 2.2E-15 106.1 10.5 117 175-299 64-181 (451)
187 KOG0255 Synaptic vesicle trans 99.2 1.4E-09 3E-14 107.2 19.7 269 37-343 225-498 (521)
188 KOG0255 Synaptic vesicle trans 99.2 1.8E-10 3.9E-15 113.5 13.1 137 174-332 113-250 (521)
189 TIGR00883 2A0106 metabolite-pr 99.2 1.7E-09 3.6E-14 101.8 18.4 130 190-330 46-184 (394)
190 KOG2533 Permease of the major 99.1 1.1E-09 2.4E-14 105.7 15.7 154 172-338 74-228 (495)
191 TIGR00792 gph sugar (Glycoside 99.1 5.6E-10 1.2E-14 107.2 13.1 171 161-338 16-195 (437)
192 PRK15403 multidrug efflux syst 99.1 8E-08 1.7E-12 91.9 27.0 157 136-301 210-374 (413)
193 KOG2504 Monocarboxylate transp 99.1 1.8E-09 3.9E-14 105.1 13.3 172 147-338 45-222 (509)
194 TIGR02718 sider_RhtX_FptX side 99.0 5.3E-09 1.1E-13 99.1 14.5 172 147-336 4-183 (390)
195 COG2211 MelB Na+/melibiose sym 99.0 4.6E-07 1E-11 86.2 27.0 159 137-302 229-398 (467)
196 PRK11462 putative transporter; 99.0 9.9E-07 2.1E-11 85.6 28.3 159 137-302 221-389 (460)
197 COG0738 FucP Fucose permease [ 98.9 5.1E-08 1.1E-12 89.7 16.3 165 162-333 31-206 (422)
198 COG2807 CynX Cyanate permease 98.9 5.8E-08 1.3E-12 88.1 15.8 153 162-333 30-182 (395)
199 PRK09669 putative symporter Ya 98.9 2.6E-08 5.7E-13 96.1 14.0 169 161-336 26-203 (444)
200 TIGR00924 yjdL_sub1_fam amino 98.9 2.3E-06 4.9E-11 83.4 26.8 180 145-338 273-469 (475)
201 TIGR00889 2A0110 nucleoside tr 98.8 5.5E-08 1.2E-12 93.2 14.3 156 152-332 10-175 (418)
202 TIGR00788 fbt folate/biopterin 98.8 7.5E-08 1.6E-12 93.6 15.4 177 145-339 27-210 (468)
203 KOG0569 Permease of the major 98.8 2E-07 4.4E-12 89.3 16.6 134 182-333 63-201 (485)
204 PF01306 LacY_symp: LacY proto 98.8 3.8E-08 8.3E-13 92.4 11.1 172 141-332 4-183 (412)
205 TIGR00788 fbt folate/biopterin 98.8 2E-07 4.3E-12 90.6 16.4 159 136-302 244-415 (468)
206 PF03209 PUCC: PUCC protein; 98.8 9.1E-06 2E-10 75.5 26.2 189 136-332 200-393 (403)
207 PRK11462 putative transporter; 98.8 2.4E-07 5.2E-12 89.9 16.7 169 160-335 25-202 (460)
208 KOG2563 Permease of the major 98.8 9.9E-08 2.1E-12 88.9 13.2 199 133-345 255-458 (480)
209 KOG0252 Inorganic phosphate tr 98.8 1.5E-07 3.2E-12 87.9 13.4 105 176-286 81-193 (538)
210 TIGR00926 2A1704 Peptide:H+ sy 98.8 3.6E-07 7.9E-12 91.5 17.4 164 160-335 3-180 (654)
211 PF06609 TRI12: Fungal trichot 98.8 2.6E-06 5.5E-11 83.9 22.6 155 138-298 303-465 (599)
212 KOG0253 Synaptic vesicle trans 98.7 2.7E-07 5.9E-12 83.8 14.3 143 173-336 107-250 (528)
213 PRK10429 melibiose:sodium symp 98.7 3E-07 6.5E-12 89.6 15.8 175 154-335 16-199 (473)
214 PF03825 Nuc_H_symport: Nucleo 98.7 2.4E-07 5.2E-12 87.9 14.5 102 161-267 19-121 (400)
215 PF13347 MFS_2: MFS/sugar tran 98.7 3E-08 6.5E-13 95.3 8.3 172 161-339 18-200 (428)
216 KOG3762 Predicted transporter 98.7 5.5E-08 1.2E-12 92.2 9.3 179 139-336 366-546 (618)
217 TIGR00805 oat sodium-independe 98.7 1.9E-06 4.2E-11 86.7 20.4 73 136-208 322-396 (633)
218 KOG3764 Vesicular amine transp 98.7 2.1E-07 4.5E-12 85.4 10.7 184 135-336 261-453 (464)
219 KOG2325 Predicted transporter/ 98.6 6.1E-07 1.3E-11 85.6 12.9 189 145-341 35-233 (488)
220 TIGR01301 GPH_sucrose GPH fami 98.6 4E-06 8.7E-11 81.0 18.4 182 144-341 258-475 (477)
221 PF06813 Nodulin-like: Nodulin 98.6 1.1E-06 2.4E-11 77.4 13.2 128 156-291 14-149 (250)
222 PF05631 DUF791: Protein of un 98.6 5.5E-06 1.2E-10 75.8 18.0 165 158-339 48-218 (354)
223 PRK10207 dipeptide/tripeptide 98.6 5.8E-05 1.3E-09 73.8 26.3 173 161-338 286-477 (489)
224 PF00083 Sugar_tr: Sugar (and 98.6 8.5E-10 1.8E-14 106.5 -7.6 138 180-333 47-188 (451)
225 KOG1330 Sugar transporter/spin 98.5 1.6E-07 3.6E-12 87.7 6.7 167 136-302 236-414 (493)
226 PRK09848 glucuronide transport 98.5 4.7E-06 1E-10 80.5 17.0 120 163-283 27-156 (448)
227 COG2211 MelB Na+/melibiose sym 98.5 5.1E-06 1.1E-10 79.2 16.3 177 154-337 22-207 (467)
228 PRK09584 tppB putative tripept 98.5 6.6E-06 1.4E-10 80.7 16.8 155 181-341 318-483 (500)
229 PF03209 PUCC: PUCC protein; 98.3 1.4E-05 3.1E-10 74.3 13.9 131 170-302 6-153 (403)
230 KOG2615 Permease of the major 98.3 1.5E-05 3.2E-10 73.1 13.0 136 161-301 278-415 (451)
231 PF03092 BT1: BT1 family; Int 98.2 2.3E-05 5.1E-10 75.3 14.0 159 166-339 12-177 (433)
232 PF06813 Nodulin-like: Nodulin 98.2 3E-06 6.6E-11 74.6 6.9 67 1-67 178-249 (250)
233 KOG3626 Organic anion transpor 98.2 0.00021 4.6E-09 71.5 19.8 74 134-207 382-457 (735)
234 COG0477 ProP Permeases of the 98.2 0.00026 5.7E-09 63.1 18.3 150 161-327 19-175 (338)
235 KOG2816 Predicted transporter 98.1 3.4E-05 7.3E-10 74.4 11.0 131 189-342 72-204 (463)
236 PF12832 MFS_1_like: MFS_1 lik 98.0 4.4E-05 9.5E-10 54.4 8.7 57 151-207 7-63 (77)
237 PF01770 Folate_carrier: Reduc 98.0 0.00054 1.2E-08 64.5 17.6 142 136-281 239-384 (412)
238 PF03137 OATP: Organic Anion T 97.9 2.7E-06 6E-11 83.7 0.0 168 134-302 295-516 (539)
239 PF05978 UNC-93: Ion channel r 97.8 0.001 2.2E-08 54.2 14.4 107 184-297 42-148 (156)
240 KOG2563 Permease of the major 97.8 0.00074 1.6E-08 63.5 14.5 149 143-299 40-201 (480)
241 PF11700 ATG22: Vacuole efflux 97.8 0.0019 4.1E-08 62.9 17.9 147 182-339 73-249 (477)
242 KOG4686 Predicted sugar transp 97.8 1.2E-05 2.6E-10 70.8 2.1 153 144-302 41-200 (459)
243 PRK15462 dipeptide/tripeptide 97.6 0.017 3.8E-07 56.3 21.8 154 180-334 309-475 (493)
244 TIGR00769 AAA ADP/ATP carrier 97.6 0.0049 1.1E-07 59.6 17.5 145 144-299 7-190 (472)
245 PRK03612 spermidine synthase; 97.6 0.0087 1.9E-07 58.9 19.1 159 155-333 25-193 (521)
246 PF03092 BT1: BT1 family; Int 97.5 0.0047 1E-07 59.5 16.3 120 176-302 252-382 (433)
247 KOG3098 Uncharacterized conser 97.5 0.02 4.3E-07 55.0 19.2 146 137-286 233-401 (461)
248 KOG2816 Predicted transporter 97.4 0.018 3.8E-07 55.8 19.0 128 168-303 265-395 (463)
249 PF03137 OATP: Organic Anion T 97.4 2.6E-05 5.6E-10 76.8 -0.3 167 163-336 22-249 (539)
250 TIGR01272 gluP glucose/galacto 97.4 0.00037 8E-09 64.0 7.1 97 235-332 8-108 (310)
251 TIGR00806 rfc RFC reduced fola 97.4 0.0044 9.6E-08 59.5 14.0 137 137-281 255-397 (511)
252 PF02487 CLN3: CLN3 protein; 97.3 0.056 1.2E-06 51.0 19.8 107 178-293 280-390 (402)
253 PF00854 PTR2: POT family; In 97.3 0.0015 3.4E-08 61.5 9.3 104 217-333 3-119 (372)
254 PF06779 DUF1228: Protein of u 97.2 0.0031 6.7E-08 45.5 8.3 69 159-233 7-75 (85)
255 KOG3626 Organic anion transpor 97.2 0.0013 2.7E-08 66.0 8.4 169 163-338 116-344 (735)
256 KOG0637 Sucrose transporter an 97.0 0.00094 2E-08 62.9 5.4 141 148-290 36-195 (498)
257 TIGR00939 2a57 Equilibrative N 96.9 0.057 1.2E-06 52.0 16.8 101 181-286 309-421 (437)
258 KOG1237 H+/oligopeptide sympor 96.9 0.027 5.8E-07 56.0 14.8 162 155-334 48-242 (571)
259 COG2270 Permeases of the major 96.9 0.014 3.1E-07 54.7 11.9 167 164-337 35-220 (438)
260 PF06963 FPN1: Ferroportin1 (F 96.9 0.034 7.3E-07 53.3 14.8 153 137-298 252-415 (432)
261 KOG2325 Predicted transporter/ 96.5 0.028 6.1E-07 54.2 11.2 83 245-340 396-478 (488)
262 PF06963 FPN1: Ferroportin1 (F 96.5 0.68 1.5E-05 44.4 20.1 179 145-338 3-201 (432)
263 KOG3810 Micronutrient transpor 96.4 0.059 1.3E-06 49.4 11.9 185 137-332 227-416 (433)
264 PF01770 Folate_carrier: Reduc 96.2 0.28 6.1E-06 46.5 15.6 156 165-338 24-183 (412)
265 PF13000 Acatn: Acetyl-coenzym 96.1 0.77 1.7E-05 44.4 18.1 50 252-302 420-469 (544)
266 PF07672 MFS_Mycoplasma: Mycop 95.6 1.1 2.5E-05 39.5 15.5 139 135-278 85-247 (267)
267 PF02487 CLN3: CLN3 protein; 95.4 0.34 7.4E-06 45.8 12.6 130 184-336 64-194 (402)
268 COG3104 PTR2 Dipeptide/tripept 95.3 1.8 4E-05 41.8 17.2 142 181-335 326-485 (498)
269 KOG3762 Predicted transporter 95.1 0.021 4.5E-07 55.2 3.6 66 162-232 29-94 (618)
270 KOG3098 Uncharacterized conser 94.8 0.5 1.1E-05 45.5 12.0 101 180-286 50-151 (461)
271 PF01733 Nucleoside_tran: Nucl 94.2 0.014 3E-07 53.6 0.1 99 183-286 186-297 (309)
272 KOG4332 Predicted sugar transp 94.0 0.11 2.4E-06 46.1 5.2 96 165-266 58-154 (454)
273 KOG1479 Nucleoside transporter 93.8 5.2 0.00011 37.9 16.3 122 145-271 19-150 (406)
274 KOG3574 Acetyl-CoA transporter 93.1 1.5 3.2E-05 41.1 11.1 135 145-287 32-183 (510)
275 COG4262 Predicted spermidine s 93.0 7.7 0.00017 36.0 15.9 117 147-264 10-132 (508)
276 PF03219 TLC: TLC ATP/ADP tran 92.1 13 0.00028 36.5 18.8 42 257-299 164-205 (491)
277 KOG1479 Nucleoside transporter 91.6 3.9 8.4E-05 38.7 12.2 109 164-278 263-384 (406)
278 COG3202 ATP/ADP translocase [E 87.6 29 0.00063 33.8 17.4 42 257-299 168-209 (509)
279 KOG3574 Acetyl-CoA transporter 85.3 5.2 0.00011 37.6 8.3 165 137-302 258-433 (510)
280 PF02990 EMP70: Endomembrane p 80.7 12 0.00026 37.0 9.6 70 138-208 252-322 (521)
281 TIGR00880 2_A_01_02 Multidrug 75.5 32 0.0007 25.9 9.5 27 180-206 88-114 (141)
282 TIGR00939 2a57 Equilibrative N 74.2 87 0.0019 30.3 16.1 28 241-269 110-137 (437)
283 KOG3097 Predicted membrane pro 74.1 16 0.00035 33.7 7.5 109 144-264 29-137 (390)
284 PF11947 DUF3464: Protein of u 72.0 7.4 0.00016 31.4 4.4 33 254-286 111-143 (153)
285 TIGR00769 AAA ADP/ATP carrier 71.9 1E+02 0.0022 30.1 27.1 146 169-328 152-345 (472)
286 PRK10263 DNA translocase FtsK; 69.1 1.1E+02 0.0023 33.8 13.2 20 187-206 60-79 (1355)
287 COG5336 Uncharacterized protei 67.3 15 0.00032 27.6 4.8 32 270-302 39-70 (116)
288 PF13000 Acatn: Acetyl-coenzym 65.8 31 0.00068 33.8 7.9 83 148-233 4-89 (544)
289 KOG4332 Predicted sugar transp 63.6 51 0.0011 29.8 8.2 134 140-280 244-387 (454)
290 COG3202 ATP/ADP translocase [E 63.6 1.5E+02 0.0033 29.0 24.3 28 11-38 178-205 (509)
291 KOG0637 Sucrose transporter an 63.3 23 0.00051 34.2 6.5 64 144-207 279-360 (498)
292 COG5336 Uncharacterized protei 62.0 28 0.0006 26.2 5.3 18 190-207 53-70 (116)
293 KOG3880 Predicted small molecu 60.6 1.4E+02 0.0031 27.6 10.6 53 235-287 340-392 (409)
294 KOG2601 Iron transporter [Inor 59.6 1.6E+02 0.0036 28.0 11.2 64 148-211 31-95 (503)
295 PF11947 DUF3464: Protein of u 57.0 79 0.0017 25.6 7.6 31 179-209 96-126 (153)
296 PF03219 TLC: TLC ATP/ADP tran 56.6 2.1E+02 0.0045 28.2 23.5 72 135-206 271-346 (491)
297 COG2056 Predicted permease [Ge 55.3 1.8E+02 0.004 27.2 10.8 31 315-345 190-220 (444)
298 TIGR01667 YCCS_YHJK integral m 52.8 1.7E+02 0.0037 30.3 11.2 48 202-251 46-95 (701)
299 KOG1278 Endosomal membrane pro 51.8 1.3E+02 0.0028 29.8 9.4 30 177-206 357-386 (628)
300 PF06912 DUF1275: Protein of u 50.1 1.6E+02 0.0034 25.0 16.2 17 187-203 54-70 (209)
301 PF12832 MFS_1_like: MFS_1 lik 48.0 94 0.002 21.7 7.8 31 272-303 34-64 (77)
302 PF05631 DUF791: Protein of un 47.8 2.4E+02 0.0052 26.4 16.3 90 143-232 118-212 (354)
303 TIGR01666 YCCS hypothetical me 47.5 2.6E+02 0.0057 28.9 11.5 50 200-251 44-95 (704)
304 PF03547 Mem_trans: Membrane t 45.9 2.6E+02 0.0056 26.2 17.9 21 137-157 238-258 (385)
305 PF11299 DUF3100: Protein of u 44.3 31 0.00067 29.9 3.7 89 197-286 125-219 (241)
306 PTZ00370 STEVOR; Provisional 43.5 69 0.0015 28.8 5.8 33 315-347 257-289 (296)
307 PF12805 FUSC-like: FUSC-like 40.9 2.7E+02 0.0058 25.0 10.5 15 235-249 21-35 (284)
308 PF06645 SPC12: Microsomal sig 37.2 1.3E+02 0.0028 21.2 5.4 28 291-332 24-51 (76)
309 PF06570 DUF1129: Protein of u 36.3 37 0.00081 29.0 3.1 15 193-207 121-135 (206)
310 PF15086 UPF0542: Uncharacteri 33.6 1.5E+02 0.0033 20.5 4.9 24 316-339 24-47 (74)
311 COG3619 Predicted membrane pro 33.5 3.2E+02 0.007 23.8 17.5 41 166-206 42-82 (226)
312 COG0385 Predicted Na+-dependen 32.9 4E+02 0.0086 24.6 13.9 61 235-300 93-153 (319)
313 PF05545 FixQ: Cbb3-type cytoc 31.5 1.1E+02 0.0023 19.3 3.9 6 334-339 28-33 (49)
314 PF04226 Transgly_assoc: Trans 31.3 1.3E+02 0.0029 18.9 4.2 13 290-302 7-19 (48)
315 PRK10263 DNA translocase FtsK; 30.5 8.2E+02 0.018 27.5 13.2 18 189-206 141-158 (1355)
316 PF02535 Zip: ZIP Zinc transpo 29.6 4.2E+02 0.0091 23.8 16.4 20 47-66 80-99 (317)
317 PF04474 DUF554: Protein of un 28.3 2.3E+02 0.0049 24.7 6.5 60 187-252 10-69 (226)
318 PRK05978 hypothetical protein; 28.0 3.1E+02 0.0067 22.1 6.8 17 40-56 92-108 (148)
319 KOG2881 Predicted membrane pro 26.9 3.1E+02 0.0068 24.4 7.0 19 139-157 202-220 (294)
320 PF06800 Sugar_transport: Suga 25.9 1.2E+02 0.0026 27.2 4.5 12 241-252 45-56 (269)
321 TIGR01478 STEVOR variant surfa 25.4 1.2E+02 0.0027 27.1 4.4 30 315-344 261-290 (295)
322 TIGR02230 ATPase_gene1 F0F1-AT 25.3 2.9E+02 0.0063 20.6 6.6 10 292-301 60-69 (100)
323 COG2962 RarD Predicted permeas 25.2 5.2E+02 0.011 23.4 10.6 83 136-232 61-144 (293)
324 PF11666 DUF2933: Protein of u 24.1 2.2E+02 0.0047 18.7 4.9 23 45-67 15-37 (55)
325 COG2274 SunT ABC-type bacterio 23.5 8.5E+02 0.018 25.3 16.8 21 187-207 165-185 (709)
326 PF12273 RCR: Chitin synthesis 22.7 71 0.0015 25.0 2.3 17 46-62 1-17 (130)
327 PF07857 DUF1632: CEO family ( 20.9 1.7E+02 0.0036 26.0 4.5 13 320-332 119-131 (254)
328 KOG1277 Endosomal membrane pro 20.5 5.9E+02 0.013 24.9 8.0 32 184-216 328-359 (593)
329 PF11003 DUF2842: Protein of u 20.5 2.8E+02 0.0061 18.6 6.1 49 17-65 2-52 (62)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-31 Score=257.44 Aligned_cols=312 Identities=13% Similarity=0.197 Sum_probs=236.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHH-HHHhhh-hHHhhhhhhhccccCCCCcccCCCCCCCCCC
Q 018271 17 HLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLL-FLLSSP-LGIAIKAQREDTTRLSPTFATQRSPLVDCPE 94 (358)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ll~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (358)
+|+.++++++.+++|++++++++.+.+.++..+...+++++ ++++.| +.+|.+. ++..++.+ +.++ +
T Consensus 244 ~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~--~~~~~~~~----~~~~-----~ 312 (591)
T PTZ00207 244 RFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT--FDGKRPHD----DSDG-----K 312 (591)
T ss_pred ehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH--hccCCcCC----Cccc-----c
Confidence 89999999999999999999999999888888887777666 777888 6677654 11111100 0000 0
Q ss_pred CcccccccCCCCcccccCCCCCccchhhhhccccccccccccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc
Q 018271 95 TTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL 174 (358)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 174 (358)
..+.. +.+++ . ..+++++.+...+...|..+ .++++.+++.++|++++.++|..+....+++|+.++.+++
T Consensus 313 ~~~~~----~~~~~-~--~~~~~~~~~~~~~~~~P~~~--~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl 383 (591)
T PTZ00207 313 AKEHV----EAGEE-V--SAAEDKVVETDVDYIAPQFQ--ETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTAL 383 (591)
T ss_pred ccccc----ccccc-c--cccccccccccccCCCCCCc--chHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHh
Confidence 00000 00000 0 00000000000000112222 2899999999999999999999999999999999999999
Q ss_pred -CCCchh--hHHHHHHHHHHHHHhhhHhHHHHHHHhhhcC----CchHHHHHHHHHHHHHHHHHHHhcCc-hhHHHHHHH
Q 018271 175 -GYPTSA--INSLVSLWSIWNFLGRFGGGYVSDIVLHRMG----WERPSFIAITLATMSVGHIVVASGFP-GNLYVGSII 246 (358)
Q Consensus 175 -G~s~~~--a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~----~gr~~~~~~~~~~~~~~~~l~~~~~~-~~l~~~~~l 246 (358)
|.+.++ ..+++++.++++.+||+.+|.++ .+-+|+. +.|...+.+..+ ++++.++++...+ ..+++..++
T Consensus 384 ~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~l 461 (591)
T PTZ00207 384 AGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFI 461 (591)
T ss_pred cCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHH
Confidence 884333 33389999999999999999998 5555543 566777777767 6666666664444 789999999
Q ss_pred HHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCC-CCccccccchHHHHHHHHHH
Q 018271 247 VGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE-GNSCNGTHCFMLSFLIMASV 325 (358)
Q Consensus 247 ~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~-~~~~~g~~~~~~~f~~~~~~ 325 (358)
.|+++|..+++..++++|+|+ ++.|+.+++..++..+|+++++..++|.+||+...++ +..|+|.+||+.+|.+++++
T Consensus 462 vg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~ 540 (591)
T PTZ00207 462 AAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGL 540 (591)
T ss_pred HHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHH
Confidence 999999999999999999999 9999999999999999999999999999999987654 46899999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhh
Q 018271 326 AFVGCLVAFLLFIRTRRFYKQVVLRR 351 (358)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (358)
+++++++..+++.|+|+.+++...+|
T Consensus 541 ~~~g~~~s~~l~~R~r~~y~~~~~~~ 566 (591)
T PTZ00207 541 SFLAFITSTYVHLQYRRLCLKALEER 566 (591)
T ss_pred HHHHHHHHhheeeehHHHHHHHHHHH
Confidence 99999999999999998877655443
No 2
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.81 E-value=2.8e-17 Score=158.85 Aligned_cols=198 Identities=15% Similarity=0.184 Sum_probs=139.6
Q ss_pred HhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 139 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
..+|++.+|.+++..++.....+....++|.+.++ .|++..+++.+..+..++..++.++.|+++||++++ .|+..
T Consensus 248 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~---r~~~~ 324 (452)
T PRK11273 248 YVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG---NRGAT 324 (452)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---CcchH
Confidence 46788999998888887777777888899999986 599988888888899999999999999999999543 12222
Q ss_pred HHHHHHHHHHHHHHHH-h--cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHH
Q 018271 218 IAITLATMSVGHIVVA-S--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRII 294 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~-~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~ 294 (358)
......+..++.+++. . .+....++..++.|.+..+.......+..|.+|++.+|++.|+.+....+|+.+.+|.+.
T Consensus 325 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~ 404 (452)
T PRK11273 325 GVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 404 (452)
T ss_pred HHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhH
Confidence 2222222222222222 1 222223334444554433333334456789999999999999998888887655689999
Q ss_pred HHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 018271 295 GYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRR 351 (358)
Q Consensus 295 g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (358)
|++.|+.| |+..|++++++++++++...++.+.++|+.++..+++
T Consensus 405 g~l~~~~g------------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (452)
T PRK11273 405 GYTVDFFG------------WDGGFMVMIGGSILAVILLIVVMIGEKRHHEELLQKR 449 (452)
T ss_pred HHHHHHhc------------chHHHHHHHHHHHHHHHHHHHHhccccchHHHHHhhh
Confidence 99999988 9999999999888888777666555555444444443
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.80 E-value=2.3e-18 Score=173.10 Aligned_cols=137 Identities=15% Similarity=0.182 Sum_probs=109.7
Q ss_pred HHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHH
Q 018271 185 VSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITY 263 (358)
Q Consensus 185 ~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~ 263 (358)
..+..++.++|.++.|+++||+ |||.++.+++++.+++.+++. ..+...+++..++.|++.++.++..+++++
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~------GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~a 674 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKI------GRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTV 674 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh------CCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999 777888888888888777665 444455566667778877788888999999
Q ss_pred HhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 018271 264 EIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRR 342 (358)
Q Consensus 264 e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 342 (358)
|+||++.|++++|+.+..+++|+ +++|+++|.+.+.. ...+|++.+++.++++++.+++ +++++
T Consensus 675 El~Pt~~Rgta~Gi~~~~~rlGa-iigp~i~g~L~~~~-------------~~~pf~i~a~~lll~~ll~~~L-PET~~ 738 (742)
T TIGR01299 675 ELYPSDKRATAFGFLNALCKAAA-VLGILIFGSFVGIT-------------KAAPILFASAALACGGLLALKL-PDTRG 738 (742)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhh-------------hHHHHHHHHHHHHHHHHHHHhC-CCCcc
Confidence 99999999999999999999999 58999999888752 5677888887777776655443 55544
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.78 E-value=1.1e-16 Score=153.91 Aligned_cols=178 Identities=14% Similarity=0.075 Sum_probs=128.1
Q ss_pred hhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH
Q 018271 140 SVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 218 (358)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~ 218 (358)
.++++.+|.+.+..++.....+.+.+|+|.+++ ++|++..+++...+.+.+++.+|+++.|+++||+.++ +|+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~---~r~~~~ 315 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNG---NRGPMN 315 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccC---CccHHH
Confidence 567889998888777776666778889999985 5699999999999999999999999999999998543 232222
Q ss_pred H---HHHHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHH
Q 018271 219 A---ITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 295 (358)
Q Consensus 219 ~---~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g 295 (358)
. ++.....+...++...+........++.|++..+..........|.+|++.+|++.|+.+....+|.. ++|++.|
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~~p~~~g 394 (434)
T PRK11663 316 LIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAA-LSGYPLA 394 (434)
T ss_pred HHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHH-HhcccHH
Confidence 1 12221221111111222222223334444433333334456678999999999999999999999994 8999999
Q ss_pred HHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 296 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 296 ~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
++.|+.| |+..|++.+++++++++..
T Consensus 395 ~l~~~~g------------~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 395 KVLEIWH------------WTGFFVVISIAAGISALLL 420 (434)
T ss_pred HHHHhcc------------cHHHHHHHHHHHHHHHHHH
Confidence 9999987 9999999998888876554
No 5
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.78 E-value=7.9e-18 Score=154.02 Aligned_cols=186 Identities=15% Similarity=0.142 Sum_probs=151.2
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.+.+++|+..|.+.+++++....-+++..|.|.|+.+ .|+|..++++..+++-.+++.|.+++||+|||+.+ |||
T Consensus 245 ~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfk----grR 320 (448)
T COG2271 245 VKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFK----GRR 320 (448)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcc----ccc
Confidence 4667899999999999999999999999999988875 59999999999999999999999999999999854 444
Q ss_pred -HHHHHHHHHHHHHHHHHH-hcC--chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhh-HHHHHh
Q 018271 216 -SFIAITLATMSVGHIVVA-SGF--PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPV-GSYVCS 290 (358)
Q Consensus 216 -~~~~~~~~~~~~~~~l~~-~~~--~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~i-g~~i~g 290 (358)
+.-++.++...++.+++. .++ +....+..++.|+...+.+-+......|..|++..|++.|+.+.++.+ |+ .++
T Consensus 321 ~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga-~~a 399 (448)
T COG2271 321 GPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGA-ALA 399 (448)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhH-Hhc
Confidence 444444555555555554 332 244566778888887777777777888999999999999999999999 66 578
Q ss_pred HHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 291 VRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 291 p~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
....|++.|.+| |...|+++.+.++++.++...+...
T Consensus 400 ~~~~g~i~d~~g------------W~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 400 GLPLGYIADTWG------------WDGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred CCcceeeEecCC------------CcchHHHHHHHHHHHHHHHHHHHhh
Confidence 888999989877 9999999998888887766555443
No 6
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.77 E-value=7.9e-17 Score=157.28 Aligned_cols=168 Identities=13% Similarity=0.142 Sum_probs=118.4
Q ss_pred HHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHH-HHHH
Q 018271 154 LCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSV-GHIV 231 (358)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~-~~~l 231 (358)
++....++.+..|+|++++ .+|++..+..+..+...++..++.++.|+++||+ +||+.+..+.++..+ +..+
T Consensus 260 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~------grr~~~~~~~~~~~~~~~~~ 333 (490)
T PRK10642 260 IATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF------GRRPFVILGSVALFVLAIPA 333 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------ccHHHHHHHHHHHHHHHHHH
Confidence 4445666778889999886 5699988888888888899999999999999999 555555555433222 2221
Q ss_pred H--H-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCc
Q 018271 232 V--A-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNS 308 (358)
Q Consensus 232 ~--~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~ 308 (358)
+ . ..+...+++..++.|++.+...+....+++|++|++.||+++|+.+..+.+++. ++|.+.|++.+..++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~-~~p~i~g~l~~~~~~----- 407 (490)
T PRK10642 334 FILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAG-LTPTLAAWLVESTQN----- 407 (490)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCC-----
Confidence 1 1 222334555667777777766677788899999999999999986544556663 689999999887654
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018271 309 CNGTHCFMLSFLIMASVAFVGCLVAFLLFIRT 340 (358)
Q Consensus 309 ~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 340 (358)
|+..+++..++++++.+..++ .+|+
T Consensus 408 ------~~~~~~~~~~~~~i~~~~~~~-~pes 432 (490)
T PRK10642 408 ------LMMPAYYLMVVAVIGLITGVT-MKET 432 (490)
T ss_pred ------chHHHHHHHHHHHHHHHHHHH-hccc
Confidence 677766666666666655443 3444
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.76 E-value=4.4e-16 Score=151.12 Aligned_cols=192 Identities=14% Similarity=0.055 Sum_probs=133.6
Q ss_pred HhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 139 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
+.++++.+|.+.+..++.....+++..|+|.|++ ++|++..++++..+...+++.+|+++.|+++||+++| ..
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r------~~ 326 (467)
T PRK09556 253 YVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR------RA 326 (467)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------ch
Confidence 3688999999999888888887888899998886 4799999999999999999999999999999999543 22
Q ss_pred HHHHHHHHHHHH--HHHHh-cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhh-HHHHHhHHH
Q 018271 218 IAITLATMSVGH--IVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPV-GSYVCSVRI 293 (358)
Q Consensus 218 ~~~~~~~~~~~~--~l~~~-~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~i-g~~i~gp~i 293 (358)
+.....+..+.. +.+.. .+.....+..++.|++..+..........|.+|++.+|++.|+.+..+.+ |+ .++|.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~-~~~~~~ 405 (467)
T PRK09556 327 LVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGD-SFAKVG 405 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhH-HHHhhh
Confidence 222222222221 22222 23333445556666544333333446677999999999999999999887 65 479999
Q ss_pred HHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 294 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 294 ~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
.|++.|.........-+...+|+..|++++++++++++..+++.
T Consensus 406 ~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 406 LGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999921000000000122399999999888888876665553
No 8
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.76 E-value=5.4e-17 Score=158.96 Aligned_cols=183 Identities=15% Similarity=0.046 Sum_probs=116.3
Q ss_pred HHHhhhhhhhHHhcHHHHHHhcCCCchhhHH------------HHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHH
Q 018271 153 MLCGMGSGLATVNNISQIGESLGYPTSAINS------------LVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAI 220 (358)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~------------~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~ 220 (358)
.++....+++...+.|++.++.|++...++. ...+..++.++|.++.++++||+ +||..+.+
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~------gRR~~l~~ 370 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII------GRKPIQLM 370 (502)
T ss_pred HHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh------cchhHHHH
Confidence 3344445567778899999988987543211 23344556777899999999999 66666666
Q ss_pred HHHHHHHHHHHHH--hc--Cchh-HHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHH
Q 018271 221 TLATMSVGHIVVA--SG--FPGN-LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 295 (358)
Q Consensus 221 ~~~~~~~~~~l~~--~~--~~~~-l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g 295 (358)
+..+.+++.+++. .. +... +....+...++..+..+..+.+.+|++|++.|+++.|+.+..+.+|++ ++|.+.|
T Consensus 371 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~-~~~~~~~ 449 (502)
T TIGR00887 371 GFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAI-IGQFGFL 449 (502)
T ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHH-HHHHHhh
Confidence 6666555544433 11 1111 222222222222334556778889999999999999999999999995 8999999
Q ss_pred HHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 018271 296 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYK 345 (358)
Q Consensus 296 ~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (358)
++.+..+...+. +...++...|++.+++++++.+.. ++.+|++++..
T Consensus 450 ~l~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~l 496 (502)
T TIGR00887 450 YLAQHGDPTKGY--PTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSL 496 (502)
T ss_pred hhhccccccccc--cccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCH
Confidence 998854210000 001115667888888877776544 44567766443
No 9
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=3.1e-17 Score=158.93 Aligned_cols=184 Identities=19% Similarity=0.291 Sum_probs=163.2
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
.++++++.|+.+.+...+...+++.....+|.+.++.|++..+++.++++.++.+++||++.|+++|+... .++.+
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~----~~~~~ 367 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGI----RALVL 367 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcccc----chHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999731 35566
Q ss_pred HHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHH
Q 018271 218 IAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGY 296 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~ 296 (358)
..++.+..+++.+.+. ..+...++..++++|++.|...++.+.++.|+.+.++...++|+......++. +.||++.|+
T Consensus 368 ~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~-l~gpPiag~ 446 (509)
T KOG2504|consen 368 FLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGA-LVGPPIAGL 446 (509)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHH-HcCccccee
Confidence 6677777777665555 56777888999999999999988888999999999999999999999999999 589999999
Q ss_pred HHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 297 IYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 297 l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
++|.+++ |...|+.++.+.+++..+.++..
T Consensus 447 ~~d~tg~-----------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 447 LYDITGN-----------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeccCC-----------eeeehhhcChHHHHHHHHHHHhH
Confidence 9999987 99999999999999987665554
No 10
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.75 E-value=3.2e-16 Score=151.56 Aligned_cols=180 Identities=13% Similarity=0.191 Sum_probs=141.5
Q ss_pred HhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH
Q 018271 139 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 218 (358)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~ 218 (358)
+.++++.+|...+..++.....+....++|.+.++.|++..+++++.++..++..+++++.|+++||...++ .|+..+
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~~~~~ 313 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRP--HVQYLF 313 (455)
T ss_pred HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCH--HHHHHH
Confidence 577889999888777777777677778899999999999999999999999999999999999999742211 122233
Q ss_pred HHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 219 AITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 219 ~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
..+..+.++..++.. ..+.+.+++..++.|++.+...+..++++.|.+|++++|+.+|+.+....+|.. +||.++|.+
T Consensus 314 ~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~-igp~i~G~l 392 (455)
T TIGR00892 314 SFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVL-IGPPLAGRL 392 (455)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHH-ccccceeee
Confidence 333333333333333 445566677788899988888888889999999999999999999999999995 899999999
Q ss_pred HhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 298 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 298 ~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
.|..++ |+..|++.+++.+++++.
T Consensus 393 ~~~~g~-----------~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 393 VDATKN-----------YKYIFYASGSIVVSAGLF 416 (455)
T ss_pred ehhcCC-----------cchHHHHhhHHHHHHHHH
Confidence 998765 999999988877776653
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.75 E-value=5.9e-16 Score=147.34 Aligned_cols=172 Identities=15% Similarity=0.103 Sum_probs=131.8
Q ss_pred HHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHH
Q 018271 146 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~ 225 (358)
.+.++..+++.....+....|+|.+.++.|++..+.+.+.+...+++.+++++.|+++||+ +|+..+..+.+..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~------g~~~~~~~~~~~~ 295 (406)
T PRK11551 222 TLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL------RPRRVVLLIYAGI 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH------hHHHHHHHHHHHH
Confidence 3444444444445556777889999999999999999999999999999999999999999 5555555555555
Q ss_pred HHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCC
Q 018271 226 SVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 304 (358)
Q Consensus 226 ~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~ 304 (358)
.++.+++. ..+...+.+..++.|++.++.++..+++..|.+|+++||++.|+.+....+|.. ++|.+.|.+.++.++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~-~g~~~~g~l~~~~~~- 373 (406)
T PRK11551 296 LASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSM-AGPLLAGQLLALGRS- 373 (406)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHH-HHhhhHhhhhccCCc-
Confidence 55544444 344445556667778877777788889999999999999999999999999995 899999999998664
Q ss_pred CCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 018271 305 EGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 305 ~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
|...++....+.+++.++.+.
T Consensus 374 ----------~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 374 ----------TVGVIGASIPVILVAALAALL 394 (406)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHH
Confidence 777777777666666554443
No 12
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.74 E-value=1.1e-15 Score=144.97 Aligned_cols=184 Identities=11% Similarity=0.061 Sum_probs=139.9
Q ss_pred hhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHH
Q 018271 140 SVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIA 219 (358)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~ 219 (358)
.+++++.|.+.+.+++....++...+|+|.+.++.|++..+++.+.+++.+++.+|+++.|++.||+ +|+..+.
T Consensus 201 ~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~------~~~~~~~ 274 (393)
T PRK09705 201 VVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQ------DRRKLLM 274 (393)
T ss_pred cccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc------cchHHHH
Confidence 3456777877776766666777888999999999999999999999999999999999999999998 5555555
Q ss_pred HHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhC-CcchHHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 220 ITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 220 ~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
++..+.+++..++. .+.. ...+..++.|++.+..++.......+.++ ++++|+.+|+.+..+.+++. ++|++.|++
T Consensus 275 ~~~~l~~~~~~~~~~~~~~-~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~-~gp~~~G~l 352 (393)
T PRK09705 275 LALVLQLVGFCGFIWLPLQ-LPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAG-LAPWFSGVL 352 (393)
T ss_pred HHHHHHHHHHHHHHHccch-HHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 56555555554433 2221 11223345677777776666666677775 56899999999999999884 899999999
Q ss_pred HhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 018271 298 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRR 342 (358)
Q Consensus 298 ~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 342 (358)
.|..|+ |...|++.+++++++.++.+.+.++++.
T Consensus 353 ~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 353 RSISGN-----------YLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHhCC-----------chHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999886 9999999888888877666665555543
No 13
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.74 E-value=1.1e-15 Score=143.71 Aligned_cols=187 Identities=16% Similarity=0.068 Sum_probs=134.3
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCC--
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW-- 212 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~-- 212 (358)
..++.++++++|...+..++.......+..+.|.+.++ .|.+..+++++.+...+++.+++++.|+++||+++|+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 286 (399)
T TIGR00893 207 QIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLV 286 (399)
T ss_pred chHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Confidence 45677889999998888888888888888899988864 699999999999999999999999999999999765310
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 213 ERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 213 gr~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
........+..+.++........+.....+...+.+.+..+..+....++.|.+|++.||+++|+.+....+|.. ++|.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-~~~~ 365 (399)
T TIGR00893 287 FARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGI-VGPI 365 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhh-hhhH
Confidence 000011111111111111111111222223333333333336778889999999999999999999999999995 8999
Q ss_pred HHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHH
Q 018271 293 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 334 (358)
Q Consensus 293 i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~ 334 (358)
+.|.+.|..|+ |+..|++.+++.+++.+..+
T Consensus 366 i~g~l~~~~g~-----------~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 366 VIGAIAATTGS-----------FAGALMVVAALALIGALSYL 396 (399)
T ss_pred HhhhhccCCCc-----------hhHHHHHHHHHHHHHHHHHH
Confidence 99999998876 88999988888777765543
No 14
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.73 E-value=1.8e-16 Score=146.60 Aligned_cols=176 Identities=18% Similarity=0.261 Sum_probs=163.8
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
...+.+.++.|+.....+.....+|++.+|+|.|..++++.++.+.++..++.++...++||+ .||.++...+.
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~------~Rr~lLl~~l~ 86 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL------ERRRLLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc------chHHHHHHHHH
Confidence 456777888888888889999999999999999999999999999999999999999999999 88889999999
Q ss_pred HHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhcc
Q 018271 224 TMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 224 ~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g 302 (358)
++.++.++.+ .+++..+.+.+++.|+..|..+++..++..++.|+++|+++.++++.+..++. ++|.+++.++-|..|
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~-v~GvPLGt~ig~~~G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLAT-VLGVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHH-HHhccHHHHHHHHhh
Confidence 9999999888 78899999999999999999999999999999999999999999999999998 689999999999999
Q ss_pred CCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 303 SGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 303 ~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
||.+|++.+++.+++.+..+...+
T Consensus 166 ------------WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 ------------WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999998877766655
No 15
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.73 E-value=1.8e-15 Score=145.62 Aligned_cols=188 Identities=15% Similarity=0.160 Sum_probs=131.4
Q ss_pred HhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 139 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
..++++.+|.+.+..++.....++..+++|.+.++ .|++..+++++.+++.+.+++++++.|+++||+++++ |...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~---~~~~ 322 (438)
T TIGR00712 246 YVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGN---RGAT 322 (438)
T ss_pred HHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc---ccHH
Confidence 46788999988877777766777888899999986 5999999999999999999999999999999996432 1111
Q ss_pred HHHHHHHHHHHHHHHH-h--cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHH
Q 018271 218 IAITLATMSVGHIVVA-S--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRII 294 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~-~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~ 294 (358)
.........++.+.+. . .+.....+..++.|++..+..........|.+|++.||+++|+.+....+|+..++|.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~ 402 (438)
T TIGR00712 323 GVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 402 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhH
Confidence 1111111112222222 1 122222333344444332222222345779999999999999998888777545789999
Q ss_pred HHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 018271 295 GYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTR 341 (358)
Q Consensus 295 g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 341 (358)
|.+.|+.| |...|++.+++.+++.+..+++.+++|
T Consensus 403 G~l~~~~g------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 403 GYTVDFFG------------WDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHhcc------------chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999887 999999988888888877766666544
No 16
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.73 E-value=1.7e-15 Score=141.72 Aligned_cols=175 Identities=22% Similarity=0.327 Sum_probs=138.3
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.++.++++.+|.+....++..........+.+.+.+++|.+..+.+.+.++..++..+++++.|+++||+ +|+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~------g~~~ 271 (377)
T TIGR00890 198 VWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI------GRQK 271 (377)
T ss_pred HHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hhhh
Confidence 4567788888888777776665555566677778888999988889999999999999999999999999 5555
Q ss_pred HHHHHHHHHHHHHHHHH-hcCch--hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHH
Q 018271 217 FIAITLATMSVGHIVVA-SGFPG--NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRI 293 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~~~~~--~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i 293 (358)
.+.++..+..++.+++. .++.. .++...++.|++.+..++..+.++.|.+|+++|++.+|+.+....+|.. ++|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~-~~~~~ 350 (377)
T TIGR00890 272 TMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGI-FGGLI 350 (377)
T ss_pred hhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHH-HHHHH
Confidence 56666666666655544 22222 2334456777888877778888999999999999999999999999995 89999
Q ss_pred HHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHH
Q 018271 294 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 294 ~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~ 330 (358)
.|.+.+..| |+..|++.+++.+++.
T Consensus 351 ~g~l~~~~g------------~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 351 ASHALTEIG------------FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHhhhc------------hhhHHHHHHHHHHHhc
Confidence 999999887 9999998887776654
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.72 E-value=1.9e-15 Score=141.92 Aligned_cols=176 Identities=12% Similarity=0.034 Sum_probs=129.9
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.+++++++.+|.+.+.+++.....+++.+|+|+++++.|++.. .+...++..+.+.++ .++++||..||+ .|+.
T Consensus 185 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~--~r~~ 258 (368)
T TIGR00903 185 FGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAG--LRSI 258 (368)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhh--hHHH
Confidence 5678899999999999999999999999999999998898864 556655655555554 588999987652 2333
Q ss_pred HHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHH
Q 018271 217 FIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 295 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g 295 (358)
.......+.++....+. ..+....+....+.+++..+.++..+++.+|.+|++.||++.|+.+..+++|+. .+|++.+
T Consensus 259 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~-~~~~~~~ 337 (368)
T TIGR00903 259 YIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISV-ALALAAM 337 (368)
T ss_pred HHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHH-HHHHHHH
Confidence 33323333344333333 233333344455566667677777889999999999999999999999999994 7898888
Q ss_pred HHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 296 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 296 ~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
.+.. + ....|.+.++..+++++..
T Consensus 338 ~~~~--~------------~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 338 LFIS--S------------AEAYFTFLAILITIAFAIA 361 (368)
T ss_pred HHhc--C------------HHHHHHHHHHHHHHHHHHH
Confidence 7773 3 7788888888888877664
No 18
>PRK09952 shikimate transporter; Provisional
Probab=99.71 E-value=6.6e-15 Score=141.76 Aligned_cols=178 Identities=12% Similarity=0.059 Sum_probs=122.6
Q ss_pred hhhchhHHHHHH-HHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 140 SVCTLNFWLLFV-AMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 140 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
.+++++.|...+ ..++.....+...+|.|.+.+ ++|++.........+..+.+.++.++.|+++||+ +||+.
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~------grr~~ 318 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF------GRRRV 318 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CchHH
Confidence 456666665543 344455566777888988876 5688877655556666778888999999999999 44454
Q ss_pred HHHHHHHHHHHHHHH--H--hcCch-hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHH-HhhhHHHHHhH
Q 018271 218 IAITLATMSVGHIVV--A--SGFPG-NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAI-ASPVGSYVCSV 291 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~--~--~~~~~-~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~-~~~ig~~i~gp 291 (358)
+..+.++.+++.+.+ . ..+.. .+.+..++.+++.+...+..+++++|.+|++.|+++.|+.+. +..+|+. ++|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~-~~p 397 (438)
T PRK09952 319 YITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGG-FTP 397 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHH-HHH
Confidence 555544443333222 1 11222 223344555677777777888999999999999999999754 4557874 789
Q ss_pred HHHHHHHhhc-cCCCCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 018271 292 RIIGYIYDNV-ASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 292 ~i~g~l~~~~-g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
.+.|++.|.. ++ |...+.+.+++.+++++..+.
T Consensus 398 ~i~g~l~~~~~~~-----------~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 398 FIAAALVTYFGGS-----------WHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHhcCCC-----------chHHHHHHHHHHHHHHHHHHH
Confidence 9999999865 33 888888888888877766543
No 19
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.70 E-value=2.6e-16 Score=151.92 Aligned_cols=178 Identities=13% Similarity=0.098 Sum_probs=127.0
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
.++...+..+...........+.|.+.++.|++..++++......+++++++++.|+++||+ +||..+.++.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~------~~~~~~~~~~~~ 358 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF------GRRPLLLIGAAG 358 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh------cchHHHHHHHHH
Confidence 34444444444444444566788888889999998888888999999999999999999999 555556666555
Q ss_pred HHHHHHHHH---h--cC------chhHHHHHHHHHhhhh-cccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 225 MSVGHIVVA---S--GF------PGNLYVGSIIVGVCYG-CQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 225 ~~~~~~l~~---~--~~------~~~l~~~~~l~g~~~g-~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
.+++.+++. . .. .........+.+.+.+ +..+....++.|.+|++.|++++|+.+....+|++ ++|.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~-i~~~ 437 (481)
T TIGR00879 359 MAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANF-IVGF 437 (481)
T ss_pred HHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 555544433 1 11 1122222233333333 33455667789999999999999999999999995 7899
Q ss_pred HHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 018271 293 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTR 341 (358)
Q Consensus 293 i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 341 (358)
+.|.+.++.+ |.+.|++.++++++++++..++.++++
T Consensus 438 ~~~~~~~~~~------------~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 438 LFPTMLESIG------------VGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHhcC------------ccceehhHHHHHHHHHHHHheecccCC
Confidence 9999999877 889999999888888877665555544
No 20
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.70 E-value=1.2e-14 Score=139.79 Aligned_cols=181 Identities=8% Similarity=-0.045 Sum_probs=117.2
Q ss_pred cHHHhhhchhHHHHHHHHHHh-hhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCc
Q 018271 136 NILQSVCTLNFWLLFVAMLCG-MGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWE 213 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~g 213 (358)
+.+++++++++|.+.+..++. ....+.+.+|+|.++++ +|++..+.+...++..+...++.++.|+++||++
T Consensus 234 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~g------ 307 (432)
T PRK10406 234 SLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIG------ 307 (432)
T ss_pred cHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------
Confidence 356677888888766655543 56667788899998864 6999888888888888888899999999999994
Q ss_pred hHHHHHHHHHHHHHHHH--HH-Hh-c-CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhh-HHH
Q 018271 214 RPSFIAITLATMSVGHI--VV-AS-G-FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPV-GSY 287 (358)
Q Consensus 214 r~~~~~~~~~~~~~~~~--l~-~~-~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~i-g~~ 287 (358)
||..+.+..++.++..+ .. .. . +....+....+.+++.+...+..+.+.+|.||++.|++++|+.+..+++ .+.
T Consensus 308 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~ 387 (432)
T PRK10406 308 RRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGG 387 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHh
Confidence 44444433332222221 11 11 1 1221111222222333333455678889999999999999999766554 232
Q ss_pred HHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 018271 288 VCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 288 i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
..|.+.+.+ +..|+ |...+++.++..+++.+..++
T Consensus 388 -~~p~~~~~l-~~~g~-----------~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 388 -SAEYVALSL-KSIGM-----------ETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred -HHHHHHHHH-HHhCC-----------CcHHHHHHHHHHHHHHHHHHH
Confidence 467777754 65664 766777777777766655444
No 21
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.70 E-value=3e-15 Score=143.17 Aligned_cols=186 Identities=9% Similarity=-0.051 Sum_probs=136.3
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.+..++++.++...+..++... ...+..++|.+.++ +|.+....+++.+...++..++.++.+++.||. +++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~------~~~ 289 (417)
T PRK10489 217 FRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA------RPG 289 (417)
T ss_pred HHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc------Ccc
Confidence 3456677776655544443322 34566788989887 799999999999999999999999999999985 444
Q ss_pred HHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHH
Q 018271 216 SFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRII 294 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~ 294 (358)
..+..+.++.+++.+++. .++.....+..++.|++.+...+...+++.|.+|++.||+++|+.+....+|.. +||.+.
T Consensus 290 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~-~g~~l~ 368 (417)
T PRK10489 290 LLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDA-IGAALL 368 (417)
T ss_pred hHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHh-HHHHHH
Confidence 455555556666655554 333444556667778777766666778889999999999999999999999985 899999
Q ss_pred HHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 018271 295 GYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRR 342 (358)
Q Consensus 295 g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 342 (358)
|.+.|..| +...+++.+++.++..++.....+++|+
T Consensus 369 G~l~~~~g------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 369 GGLGAMMT------------PVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred HHHHHHhc------------hhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999887 7778777776666655555444455444
No 22
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.70 E-value=8.5e-16 Score=147.75 Aligned_cols=173 Identities=17% Similarity=0.172 Sum_probs=141.3
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
.++..++.+++.......+...+|.+.+++|+|..+.+++.+...++..+++++.|+++||+ +||+.+.++.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~------g~r~~~~~~~~~ 97 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS------NARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc------CCchhHHHHHHH
Confidence 34444555555555555667789999999999999999999999999999999999999999 666777878888
Q ss_pred HHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC
Q 018271 225 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 303 (358)
Q Consensus 225 ~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~ 303 (358)
..++.++.. ..+.+.+++.+++.|++.|..++....++.|.+|+++|++++|+.+.+..+|+. ++|++.|.+.+..+
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~l~~~~g- 175 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGA-LIPLVVGAIALHYG- 175 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHccc-
Confidence 777777665 556666777788889888888888889999999999999999999999999994 89999999998877
Q ss_pred CCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 304 GEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 304 ~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
|++.|++.+++.++.++...+.
T Consensus 176 -----------w~~~f~~~~i~~~~~~~~~~~~ 197 (434)
T PRK11663 176 -----------WRYGMMIAGIIAIVVGLFLCWR 197 (434)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887766554443333
No 23
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.69 E-value=2.9e-15 Score=143.27 Aligned_cols=191 Identities=10% Similarity=0.029 Sum_probs=144.3
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCc--------hhhHHHHHHHHHHHHHhhhHhHHHHHHHhh
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPT--------SAINSLVSLWSIWNFLGRFGGGYVSDIVLH 208 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~--------~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~ 208 (358)
.++.+|++++|.+.+..++..........+.+.+.++.|.++ +..+...++..+..+++.+..|+++||+
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-- 278 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-- 278 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 345778888887777777665555455566777887777554 4568888999999999999999999999
Q ss_pred hcCCchHHHHHHHHHHHHHHHHHHHh-c-Cc---hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHH-HHh
Q 018271 209 RMGWERPSFIAITLATMSVGHIVVAS-G-FP---GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA-IAS 282 (358)
Q Consensus 209 k~~~gr~~~~~~~~~~~~~~~~l~~~-~-~~---~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~-~~~ 282 (358)
+||+++.++.++.++...++.. . +. ..+++..++.|++.+...+....++.|.+|++.||+++|+.+ ...
T Consensus 279 ----g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~ 354 (418)
T TIGR00889 279 ----GIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCN 354 (418)
T ss_pred ----CcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 6677777777777776555542 2 12 234556778888888777777888999999999999999997 677
Q ss_pred hhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018271 283 PVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRT 340 (358)
Q Consensus 283 ~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 340 (358)
.+|+ ++||+++|+++|+.|+. +..+|+..|++.+++.++++++.+++.++.
T Consensus 355 ~lg~-~iGp~l~G~l~~~~g~~------~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 355 GFGS-LLGYILSGVMVEKMFAY------GTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred hhHH-HHHHHHHHHHHHHhccc------cCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 8898 48999999999986520 001299999999888888887776666544
No 24
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.69 E-value=1.7e-15 Score=147.23 Aligned_cols=186 Identities=17% Similarity=0.181 Sum_probs=128.5
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCC-ch
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW-ER 214 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~-gr 214 (358)
.++.++++++|.+++.+++.....+.+.+++|.+..+ .|++..+++.+.++..+++.+|++++|+++||+++|+.. +|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r 324 (476)
T PLN00028 245 LRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGR 324 (476)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchh
Confidence 5667888999988887776666667778889988764 599999999999999999999999999999999887532 34
Q ss_pred HHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHH
Q 018271 215 PSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRI 293 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i 293 (358)
+....+...+..+..+++. ..+.....+..++.+++.+...+...++++++. ++++|+.+|+.+.++.+|+. ++|.+
T Consensus 325 ~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~-i~~~l 402 (476)
T PLN00028 325 LWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAV-LTQLL 402 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHH-HHHHH
Confidence 4444444444444334333 223333344455556655545555555666654 47899999999887777774 45544
Q ss_pred HHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 294 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 294 ~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
.+ .+..++ |+..|++.+++.++++++.++.+
T Consensus 403 ~~--~~~~~~-----------y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 403 FF--TGSSYS-----------TETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HH--hcCCcc-----------HhhHHHHHHHHHHHHHHHHHhee
Confidence 33 111222 99999999988888877665553
No 25
>PRK03545 putative arabinose transporter; Provisional
Probab=99.68 E-value=1.5e-15 Score=143.90 Aligned_cols=172 Identities=15% Similarity=0.178 Sum_probs=142.1
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
.+|.+.++.++.....+.....+|.+.+++|.+..+.++..+.+.++..++.+..|+++||+ +||+++..+..+
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~------g~r~~~~~~~~~ 83 (390)
T PRK03545 10 RVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV------ERRKLLIGLFVL 83 (390)
T ss_pred HHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC------ChHHHHHHHHHH
Confidence 34555554444433444455568999999999999999999999999999999999999999 777788888888
Q ss_pred HHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC
Q 018271 225 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 303 (358)
Q Consensus 225 ~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~ 303 (358)
.+++.+... .++.+.+++.+++.|++.+..++...+++.|.+|+++|++++|+...+..+|. +++|++++.+.+..|
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~-~ig~~l~~~l~~~~g- 161 (390)
T PRK03545 84 FIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAM-VLGLPLGRVIGQYLG- 161 (390)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHH-HHHhhHHHHHHHHhc-
Confidence 888777766 57777888889999998887778888999999999999999999999999999 489999999988877
Q ss_pred CCCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 018271 304 GEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 304 ~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
|++.|++.++++++..+....
T Consensus 162 -----------w~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 162 -----------WRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999998877776654443
No 26
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.68 E-value=4.4e-15 Score=141.84 Aligned_cols=182 Identities=14% Similarity=0.128 Sum_probs=142.7
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
.++.+++.+++............|.+.+++|++.++.++..+.+.++..++.+..|+++||+ |||+.+..+.++
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~------G~r~~~~~~~~~ 82 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII------GARRWIAGIMVL 82 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh------ChHHHHHHHHHH
Confidence 33444555555444445556667778889999999999999999999999999999999999 777778888888
Q ss_pred HHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC
Q 018271 225 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 303 (358)
Q Consensus 225 ~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~ 303 (358)
..++.++.. .++...+++.+++.|++.++.++....++.|.+|+++|++..|+.+.+..+|.. ++|++++++.+..+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~- 160 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMA-LGLILSGYILALDG- 160 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCC-
Confidence 887777766 567778889999999999988888888899999999999999999999999994 89999998875311
Q ss_pred CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 304 GEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 304 ~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
..+..+||+.|++.++..++.+++.+++.++
T Consensus 161 -----~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 161 -----LMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred -----CCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 0001129999999888777665555444443
No 27
>PRK03699 putative transporter; Provisional
Probab=99.68 E-value=5.9e-14 Score=133.25 Aligned_cols=174 Identities=13% Similarity=0.153 Sum_probs=133.3
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 222 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~ 222 (358)
+.+|.+.+..++.....+.+..|+|.+++ ++|+|..+++.+.+.+.++..+|+++.|+++||+ +|+..+....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~------~~~~~l~~~~ 278 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF------DLQRILTVLA 278 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh------chhhHHHHHH
Confidence 55677777777766677788899999996 4699999999999999999999999999999999 4444455444
Q ss_pred HHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhc
Q 018271 223 ATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 301 (358)
Q Consensus 223 ~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~ 301 (358)
.+.++...++. .++...+.+..++.|++.++.++...++..|..+ +++++..|+......+|+. ++|.+.|++.|..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~-i~p~~~G~l~~~~ 356 (394)
T PRK03699 279 GLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTM-LTFVVTSPIVAHF 356 (394)
T ss_pred HHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHH-HHHHHHHHHHHHh
Confidence 44444444443 3444455566777888877777777777777665 4567888998888899984 8999999999988
Q ss_pred cCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 302 ASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 302 g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
| ++..+++.+++.+++.+.+..+.
T Consensus 357 g------------~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 357 G------------LQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred C------------chhhhhhhHHHHHHHHHHHHHHH
Confidence 7 88999988888887776554443
No 28
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.68 E-value=2.9e-14 Score=136.53 Aligned_cols=160 Identities=13% Similarity=0.113 Sum_probs=113.3
Q ss_pred cHHHhhhchhHHHHHHHH---HHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCC
Q 018271 136 NILQSVCTLNFWLLFVAM---LCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 212 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~ 212 (358)
+.++.++++.++.....+ ++.....+.+..++|.+.++.|++..+.+.+.+...+++.+++++.|+++||+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~------ 293 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI------ 293 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 356677777766543322 22333334567789999998999998889888999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHh--hhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHH
Q 018271 213 ERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGV--CYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVC 289 (358)
Q Consensus 213 gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~--~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~ 289 (358)
+|+..+..+.++..+..+++. ..+.....+..++.|+ +..+..+..+.++.|.+|++.||+++|+.+....+|+. +
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~-~ 372 (426)
T PRK12307 294 GLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGT-F 372 (426)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHH-H
Confidence 555666666555554444333 2222222222333333 22334456778889999999999999999999999984 8
Q ss_pred hHHHHHHHHhhcc
Q 018271 290 SVRIIGYIYDNVA 302 (358)
Q Consensus 290 gp~i~g~l~~~~g 302 (358)
+|.+.|++.+..|
T Consensus 373 gp~~~g~l~~~~g 385 (426)
T PRK12307 373 NSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHHHccc
Confidence 9999999999877
No 29
>TIGR00898 2A0119 cation transport protein.
Probab=99.68 E-value=2.5e-15 Score=147.24 Aligned_cols=182 Identities=10% Similarity=0.039 Sum_probs=122.3
Q ss_pred ccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 135 MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
.+.+++++++.++...+..++..+........++.+..+.+.+.. ....+..+..+++.++.++++||+ +|
T Consensus 314 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~------gr 384 (505)
T TIGR00898 314 YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRL------GR 384 (505)
T ss_pred CcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHh------CC
Confidence 356788888887766554443333222222223333344455432 333455677888999999999999 66
Q ss_pred HHHHHHHHHHHHHHHHHHH-hcCc--hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhH
Q 018271 215 PSFIAITLATMSVGHIVVA-SGFP--GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 291 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~-~~~~--~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp 291 (358)
|..+.++.++.+++.+++. ..+. ....+..++.+++.+..++..+.+.+|.+|++.|++++|+.+....+|++ ++|
T Consensus 385 r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~-i~p 463 (505)
T TIGR00898 385 RYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSI-ISP 463 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHH-HHh
Confidence 7777777777776666554 3322 33344455666667777788889999999999999999999999999994 899
Q ss_pred HHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 018271 292 RIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTR 341 (358)
Q Consensus 292 ~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 341 (358)
++.+ + +..+ +...+.+.+++.+++.++.++ .++++
T Consensus 464 ~i~~-~-~~~~------------~~~~~~~~~~~~~~~~~~~~~-lpet~ 498 (505)
T TIGR00898 464 FLVY-L-GEKW------------LFLPLVLFGGLALLAGILTLF-LPETK 498 (505)
T ss_pred HHHH-H-HHHH------------HhhHHHHHHHHHHHHHHHHHc-CcCCC
Confidence 9988 4 3343 567777777777777655443 34444
No 30
>PRK10504 putative transporter; Provisional
Probab=99.68 E-value=3.4e-15 Score=145.02 Aligned_cols=174 Identities=14% Similarity=0.251 Sum_probs=147.4
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
+.+|.++++.++.....+.+..++|.+.+++|.+..+.++..+.+.++..++.+++|+++||+ +||+.+..+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~------g~r~~~~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV------GVRNIFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------chHHHHHHHHH
Confidence 467888888888877778888899999999999999999999999999999999999999999 66666666666
Q ss_pred HHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhcc
Q 018271 224 TMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 224 ~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g 302 (358)
+.+++.+++. .++.+.+++.+++.|++.+...+....++.|.+|+++|++++|+.+....+|. .++|.++|.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~g~l~~~~g 162 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGP-LLGPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHhhcc
Confidence 6666665555 45666778889999999998888888999999999999999999999999998 489999999999877
Q ss_pred CCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 303 SGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 303 ~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
|++.|++...+..++.+.....
T Consensus 163 ------------w~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 163 ------------WHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999888777776555444
No 31
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.67 E-value=2.8e-14 Score=134.97 Aligned_cols=173 Identities=10% Similarity=-0.017 Sum_probs=145.0
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.++.+|++++|.+.+..++.......+.++.|.+.++.|.+....+.+.++..++.+++.++.+++.||+ +.+.
T Consensus 198 ~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~------g~~~ 271 (382)
T TIGR00902 198 FIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNC------SARD 271 (382)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC------CHHH
Confidence 5678899999999888888777788888899999999999999999998888889999999999999998 6667
Q ss_pred HHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHH-HHhhhHHHHHhHHHH
Q 018271 217 FIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA-IASPVGSYVCSVRII 294 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~-~~~~ig~~i~gp~i~ 294 (358)
.+.++.+...+...++. .++.+.+++..++.|+..+...+....++.+. |+++++++.++.+ +...+|. .++|.++
T Consensus 272 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~-~~g~~~~ 349 (382)
T TIGR00902 272 LLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLI-AIFTAFA 349 (382)
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 77788888887777766 55666677788999999998888888899988 8889999999986 5677888 4899999
Q ss_pred HHHHhhccCCCCCccccccchHHHHHHHHHHHHHHH
Q 018271 295 GYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 295 g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~ 330 (358)
|+++|+.| + ..|+.++++.+++.
T Consensus 350 G~l~~~~g------------~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 350 GFIYPTLG------------A-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHhcc------------H-HHHHHHHHHHHHHH
Confidence 99999986 6 66777777776554
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.67 E-value=2.4e-15 Score=142.15 Aligned_cols=173 Identities=12% Similarity=0.166 Sum_probs=147.9
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
+.++.+.+..++...........+|.+.+++|++.++.++..+...++..+++++.|+++||+ +||+.+.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~------g~r~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY------SLKHILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC------ccHHHHHHHHH
Confidence 456777777777777777788899999999999999999999999999999999999999999 77777888888
Q ss_pred HHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhcc
Q 018271 224 TMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 224 ~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g 302 (358)
+.+++.++.. .++.+.+++.+++.|++.+...+....++.|++++++|+..+++...+..+|.. ++|++++.+.+..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANL-LGIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHH-HhccHHHHHhhhcc
Confidence 8888777776 567788888999999998887777788899999999999999999999999994 78999999988777
Q ss_pred CCCCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 018271 303 SGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 303 ~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
|++.|++.+++.++..+..+.
T Consensus 156 ------------wr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 156 ------------WRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999988877766554433
No 33
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.67 E-value=8.4e-14 Score=132.57 Aligned_cols=180 Identities=10% Similarity=0.031 Sum_probs=134.0
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.++.++++.+|...+..++.....+++.+++|.+.+++|++..+.+.+.+...+++.+++++.|+++||+++| +.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~ 289 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM-----NT 289 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-----hH
Confidence 4567889999988888777777778888999999999999999988888899999999999999999999533 22
Q ss_pred HHHHHHHHHHHHHHHH---Hh---cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHh
Q 018271 217 FIAITLATMSVGHIVV---AS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 290 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~---~~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~g 290 (358)
....+.....+..+.+ .. .+....++..++.|++.+...+ ......|.. +++||+++|+.+....+|+. ++
T Consensus 290 ~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~-~g 366 (402)
T TIGR00897 290 VRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAF-LA 366 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHH-HH
Confidence 2222222222221111 11 2233445566777877766543 345566754 46899999999999999995 89
Q ss_pred HHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 291 VRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 291 p~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
|++.|.+.|..| |...|++.+++.++++++.+++
T Consensus 367 p~i~g~l~~~~g------------~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 367 PAIAVLFIGFFG------------AIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHhhcc------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999987 8999999998888877665554
No 34
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.67 E-value=9e-15 Score=142.23 Aligned_cols=168 Identities=13% Similarity=0.103 Sum_probs=119.4
Q ss_pred hhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-h--cC-
Q 018271 161 LATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-S--GF- 236 (358)
Q Consensus 161 ~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~--~~- 236 (358)
+...++.|.+.++.|++.....+......+.+.++.++.|+++||+ +||..+..+..+.+++.+++. . .+
T Consensus 288 ~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~------g~r~~~i~~~~~~~v~~~~l~~~~~~~~ 361 (479)
T PRK10077 288 NVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF------GRKPLQIIGALGMAIGMFSLGTAFYTQA 361 (479)
T ss_pred hHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh------cChHHHHHhHHHHHHHHHHHHHHHhcCc
Confidence 3455677888889999887777777788889999999999999999 667777777777777666553 1 12
Q ss_pred ch-hHHHHHHHHHhhhhcc-cccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHH------HhhccCCCCCc
Q 018271 237 PG-NLYVGSIIVGVCYGCQ-WSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI------YDNVASGEGNS 308 (358)
Q Consensus 237 ~~-~l~~~~~l~g~~~g~~-~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l------~~~~g~~~~~~ 308 (358)
.. ......++.+++.+.. .+..+.+++|.+|+++|+++.|+.+..+.+|.. +++.+.+.+ .|..+
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~-~~~~~~p~~~~~~~~~~~~~------ 434 (479)
T PRK10077 362 PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANY-FVSWTFPMMDKNSWLVAHFH------ 434 (479)
T ss_pred ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHH-HHHHHhHHHHhccchhhhcc------
Confidence 12 2222334444444433 356788999999999999999999988888884 565555543 34555
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 018271 309 CNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQV 347 (358)
Q Consensus 309 ~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (358)
+...|++.++++++++++.+++.+|+|++..++
T Consensus 435 ------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 467 (479)
T PRK10077 435 ------NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEE 467 (479)
T ss_pred ------CccHHHHHHHHHHHHHHHHHhccccCCCCCHHH
Confidence 777888888877777776666666666554433
No 35
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.66 E-value=6.2e-15 Score=148.47 Aligned_cols=183 Identities=13% Similarity=0.082 Sum_probs=137.3
Q ss_pred chhHHHHHHHHHHhhhh----hhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH
Q 018271 143 TLNFWLLFVAMLCGMGS----GLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 218 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~ 218 (358)
.+..|.+++...+.... ...+...+|.+.+++|.+..+.+++.++..++.++|.+++|+++||+ |||..+
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~------GRR~~l 235 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL------GRKQCL 235 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CcHHHH
Confidence 35555554443333221 12345567888889999999999999999999999999999999999 777777
Q ss_pred HHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 219 AITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 219 ~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
+++.++.+++.++.. .++.+.+++.+++.|++.++..+..+.++.|.+|++.||..+++..++..+|.+ +++.++..+
T Consensus 236 ii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~i-la~~la~~i 314 (742)
T TIGR01299 236 LICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGI-YAAAMAWAI 314 (742)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 777777777666655 566777888999999999999999999999999999999999999999999984 788877777
Q ss_pred HhhccCCCC-CccccccchHHHHHHHHHHHHHHHHH
Q 018271 298 YDNVASGEG-NSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 298 ~~~~g~~~~-~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
....|-... ...+...+|++.+++.++.++++.+.
T Consensus 315 l~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~ 350 (742)
T TIGR01299 315 IPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGA 350 (742)
T ss_pred HHhccchhccccccccccHHHHHHHHHHHHHHHHHH
Confidence 654431000 01122334999988877766665543
No 36
>PRK03545 putative arabinose transporter; Provisional
Probab=99.66 E-value=6e-14 Score=132.94 Aligned_cols=179 Identities=11% Similarity=0.056 Sum_probs=132.2
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.++.+|++.+|..++..++.....+...++++.+.++ .|++..+++++.+...+++.+++++.|+++||+ +|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~------~~~ 271 (390)
T PRK03545 198 LPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH------PSG 271 (390)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc------chh
Confidence 3567788888776666655555555556677777665 599999999999999999999999999999998 454
Q ss_pred HHHHHHHHHHHHHHHHH-H-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHH
Q 018271 216 SFIAITLATMSVGHIVV-A-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRI 293 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~-~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i 293 (358)
.... +..+..+...++ . ..+...+++..++.|++.+.........+.+..| +.+++++|+.+....+|.. +||++
T Consensus 272 ~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~-~G~~~ 348 (390)
T PRK03545 272 FLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIG-AGALL 348 (390)
T ss_pred HHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHH-HHHHH
Confidence 4333 333333333322 2 3344455667778888776665556677778766 6889999999988898885 79999
Q ss_pred HHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 294 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 294 ~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
+|.+.|+.| ++..|++.+++.+++.+..+..
T Consensus 349 ~G~~~~~~g------------~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 349 GNQVSLHLG------------LSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHhccC------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 999999988 9999999998888877665433
No 37
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.66 E-value=3.9e-15 Score=136.52 Aligned_cols=185 Identities=15% Similarity=0.191 Sum_probs=142.4
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
..+.++++++.|.+.+.|+...+++.++..++|.|.+ ++|.+..+++.+.....+.+.+.|+++|+++||+| ++
T Consensus 210 ~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~G-----g~ 284 (417)
T COG2223 210 QLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIG-----GR 284 (417)
T ss_pred HHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhcc-----ch
Confidence 4566788999999999999999999999999999988 56999999999999999999999999999999996 44
Q ss_pred HHHHHHHHHHHHHHHHHHH-hc-------CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHH
Q 018271 215 PSFIAITLATMSVGHIVVA-SG-------FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGS 286 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~-~~-------~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~ 286 (358)
|.++ +.+..++++..+.. .. +....+...+..+++.|...+..+.+++.+|+ ++.|...|+....+++|+
T Consensus 285 rv~~-~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGG 362 (417)
T COG2223 285 RVTL-AVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGG 362 (417)
T ss_pred hHHH-HHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccc
Confidence 4444 44555555555444 21 12223333334444444444445556666666 377999999999999999
Q ss_pred HHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 287 YVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 287 ~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
+ +-|...|..++.+|+ |...|+++..+.+++.+..+..+.|
T Consensus 363 f-~lp~~~g~~~~~tg~-----------~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 363 F-FLPLAFGVSLDLTGS-----------YTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred c-chhHHHHHHHHhccc-----------HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6 669999999999997 9999999999998888776665544
No 38
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.66 E-value=6e-15 Score=140.10 Aligned_cols=156 Identities=11% Similarity=0.169 Sum_probs=134.9
Q ss_pred hhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-h
Q 018271 156 GMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-S 234 (358)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~ 234 (358)
.....+.....+|.+.+++|++.++.++..+...++..+++++.|+++||+ +||+.+..+.++.+++.++.. .
T Consensus 32 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~------grr~~~~~~~~~~~~~~~~~~~~ 105 (394)
T PRK10213 32 LIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT------DRRYVVILFAVLLTLSCLLVSFA 105 (394)
T ss_pred HHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc------CcHHHHHHHHHHHHHHHHHHHHH
Confidence 333444556678889999999999999999999999999999999999999 777788888888887777666 5
Q ss_pred cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccc
Q 018271 235 GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHC 314 (358)
Q Consensus 235 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~ 314 (358)
++.+.+++.+++.|++.+..++....+++|.+|+++|+.+.++...+..+|. +++|++++.+.+..+
T Consensus 106 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~-~ig~~l~~~l~~~~g------------ 172 (394)
T PRK10213 106 NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIAL-VIAAPLGSFLGELIG------------ 172 (394)
T ss_pred ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcC------------
Confidence 6678888999999999998888999999999999999999999999999998 489999999998887
Q ss_pred hHHHHHHHHHHHHHHH
Q 018271 315 FMLSFLIMASVAFVGC 330 (358)
Q Consensus 315 ~~~~f~~~~~~~~~~~ 330 (358)
|++.|++.+++.+++.
T Consensus 173 w~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 173 WRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999998877666544
No 39
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.66 E-value=6.6e-16 Score=141.48 Aligned_cols=175 Identities=17% Similarity=0.158 Sum_probs=148.1
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
.+..+++++......--.+....|.+.++.|+|.++.+.+.+.+.+...++.+++|.++||. +.|..+.+++++
T Consensus 30 if~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~------npr~fm~~gLil 103 (448)
T COG2271 30 IFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS------NPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC------CCceeehHHHHH
Confidence 44444555544444444577788999999999999999999999999999999999999998 566778889999
Q ss_pred HHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHH--HHHHhhc
Q 018271 225 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRII--GYIYDNV 301 (358)
Q Consensus 225 ~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~--g~l~~~~ 301 (358)
.++..+++. ..+...+.++.++.|++.|..++.....+...|++++||+..++.|++.++|+. +.|++. +++.++.
T Consensus 104 sai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGa-l~~~~~~la~~~~~~ 182 (448)
T COG2271 104 SAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGA-LAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccc-hHHHHHHHHHHHhcc
Confidence 999999888 555666778889999999999999999999999999999999999999999997 567777 8888877
Q ss_pred cCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 302 ASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 302 g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
+ |+..|++-++++++..++.++..+
T Consensus 183 ~------------w~~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 183 G------------WRAAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred c------------hhHHHHHHHHHHHHHHHHHHHHhC
Confidence 6 999999999988888877665543
No 40
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.65 E-value=1.3e-14 Score=138.91 Aligned_cols=181 Identities=15% Similarity=0.141 Sum_probs=131.8
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh----cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCC
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES----LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 212 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~ 212 (358)
..+.+|++.+|.+.+..++.......+..+.|.+..+ .+.+..+.+.+.++..++..++.++.|+++||+
T Consensus 216 ~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~------ 289 (420)
T PRK09528 216 ALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI------ 289 (420)
T ss_pred HHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 3456778887765554444333333444456666543 356666778888888999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHH-HHHHhhhHHHHHh
Q 018271 213 ERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNT-IAIASPVGSYVCS 290 (358)
Q Consensus 213 gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~-~~~~~~ig~~i~g 290 (358)
+++..+..+.++.++..+++. .++++.++...++.|++.+........++.|.+|++.+++.++. .+....+|. +++
T Consensus 290 g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~-~ig 368 (420)
T PRK09528 290 GAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGA-VFL 368 (420)
T ss_pred CcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHH-HHH
Confidence 455556666666666666555 45566666667777777766666667788999999999988766 577788888 489
Q ss_pred HHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 291 VRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 291 p~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
|++.|++.|..| |+..|.+.+++.++..++....
T Consensus 369 ~~~~G~l~~~~G------------~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 369 STLAGNLYDSIG------------FQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred HHHHHHHHHhhC------------chHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887 9999999888877776554443
No 41
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.65 E-value=6.2e-15 Score=140.83 Aligned_cols=168 Identities=18% Similarity=0.149 Sum_probs=120.1
Q ss_pred hchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc--CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHH
Q 018271 142 CTLNFWLLFVAMLCGMGSGLATVNNISQIGESL--GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIA 219 (358)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~ 219 (358)
+++.+|...+.+++.....+.+.+|+|.++++. |++..+++.+.+...+++.+|+++.|+++||+++ |+..+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~-----r~~~~~ 314 (412)
T TIGR02332 240 FTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKE-----RKHHTA 314 (412)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCc-----cHHHHH
Confidence 457889888888888888888999999999975 6777888889999999999999999999999953 232333
Q ss_pred HHHHHHHHHHHHHHh-cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHH
Q 018271 220 ITLATMSVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIY 298 (358)
Q Consensus 220 ~~~~~~~~~~~l~~~-~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~ 298 (358)
....+..++..+... .+....+....+.+++.....+.......|.+|+++|++++|+.+....+|++ ++|.+.|.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~-~~p~~~g~i~ 393 (412)
T TIGR02332 315 LPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSA-LSPFLIGILK 393 (412)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhh-hhhhhccccc
Confidence 333333333322222 22221222222333333223333445556789999999999999999999995 8999999999
Q ss_pred hhccCCCCCccccccchHHHHHHHHHHH
Q 018271 299 DNVASGEGNSCNGTHCFMLSFLIMASVA 326 (358)
Q Consensus 299 ~~~g~~~~~~~~g~~~~~~~f~~~~~~~ 326 (358)
|..|+ |++.|++.+++.
T Consensus 394 ~~~g~-----------~~~~~~~~~~~~ 410 (412)
T TIGR02332 394 DATGS-----------FNSGLWFVAALL 410 (412)
T ss_pred ccCCC-----------CchhHHHHHHHH
Confidence 98876 999988776643
No 42
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.65 E-value=5e-15 Score=139.51 Aligned_cols=165 Identities=14% Similarity=0.167 Sum_probs=138.7
Q ss_pred hhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-h
Q 018271 156 GMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-S 234 (358)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~ 234 (358)
.......+...+|.+.+++|.+..+.++..+...++..++.++.|+++||+ +||+.+..+.++.+++.++.. .
T Consensus 17 ~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~------g~r~~~~~~~~~~~~~~~~~~~~ 90 (385)
T TIGR00710 17 GPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY------GRRPVLLLGLFIFALSSLGLALS 90 (385)
T ss_pred HHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc------CChHHHHHHHHHHHHHHHHHHHH
Confidence 344445566778899999999999999999999999999999999999999 666777777777777777666 5
Q ss_pred cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccc
Q 018271 235 GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHC 314 (358)
Q Consensus 235 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~ 314 (358)
++.+.+++.+++.|++.+...+....++.|.+|+++|++.+|+.+....+|.. ++|.+++.+.+..+
T Consensus 91 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~~------------ 157 (385)
T TIGR00710 91 NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPA-VAPLLGGYILVWLS------------ 157 (385)
T ss_pred ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC------------
Confidence 66677788889999999988888899999999999999999999999999984 89999999998877
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 315 FMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 315 ~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
|+..|++.+++.++..+..++..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (385)
T TIGR00710 158 WHAIFAFLSLAGILLSALIFFILPE 182 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999888777776655444333
No 43
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.65 E-value=8.9e-14 Score=134.15 Aligned_cols=185 Identities=16% Similarity=0.200 Sum_probs=151.1
Q ss_pred ccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCc
Q 018271 135 MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWE 213 (358)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~g 213 (358)
.+.+++.|.++....++++++..-+...++.....|.+ ++|++..+...+..+.++.+++|.+++|++.||+|.|.
T Consensus 272 ~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~--- 348 (477)
T PF11700_consen 272 RTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKT--- 348 (477)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch---
Confidence 35667777888888889999888888888888888877 77999999888899999999999999999999996431
Q ss_pred hHHHHHHHHHHH-HHHHHHHH--------hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhh
Q 018271 214 RPSFIAITLATM-SVGHIVVA--------SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPV 284 (358)
Q Consensus 214 r~~~~~~~~~~~-~~~~~l~~--------~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~i 284 (358)
+.++.++.++. .+....+. ..+.+.+++..++.|++.|+.++..-++.+|+.|+++.+..+|+..+.+..
T Consensus 349 -~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 349 -KRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA 427 (477)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 13333333332 33333222 345567888899999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 018271 285 GSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 285 g~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
.++ +||.+.|.+.+.+|+ .|..+..+.++.+++.++.+.
T Consensus 428 ss~-lGPll~g~i~~~tg~-----------~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 428 SSW-LGPLLFGLITDATGS-----------QRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHH-HHHHHHHHHHHHhCC-----------chhHHHHHHHHHHHHHHHHhh
Confidence 995 899999999999987 899999999888888766533
No 44
>PRK10054 putative transporter; Provisional
Probab=99.65 E-value=9e-15 Score=138.93 Aligned_cols=176 Identities=10% Similarity=0.063 Sum_probs=138.1
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 222 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~ 222 (358)
+.+|.+.+..++...+......++|.+++ ++|++..+.++..+...+++.+++++.|+++||+ +||+.+.++.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~------g~k~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF------DKKRYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------CcchhHHHHH
Confidence 45777777888887777778888887775 6799999999999999999999999999999999 5556666666
Q ss_pred HHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhc
Q 018271 223 ATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 301 (358)
Q Consensus 223 ~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~ 301 (358)
.+..++.+++. .++.+.+++.+.+.|.+.+...+....+.+|.+|+++|++++|+.+....+|.. ++|++++.+.+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~-igp~l~~~l~~-~ 158 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWT-VGPPLGTLLVM-Q 158 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-h
Confidence 66666666555 445555555566666666666667788899999999999999999999999984 89999998875 4
Q ss_pred cCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 302 ASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 302 g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
+ |+..|++.+++.+++.++..+..++
T Consensus 159 g------------~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 159 S------------INLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 5 9999998888777776554443333
No 45
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.65 E-value=9.1e-15 Score=141.84 Aligned_cols=190 Identities=13% Similarity=0.102 Sum_probs=132.8
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
++++.++++.+|.+++..++.....+.+.+|+|.|+++ +|++..+++++.++..+++.++.++.|+++||+++|+...+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~ 332 (465)
T TIGR00894 253 PIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSL 332 (465)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 46788999999999999998888888899999998875 69999999999999999999999999999999987654233
Q ss_pred HHH----HHHHHHHHHHHHHHHHh-c-CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHH
Q 018271 215 PSF----IAITLATMSVGHIVVAS-G-FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYV 288 (358)
Q Consensus 215 ~~~----~~~~~~~~~~~~~l~~~-~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i 288 (358)
+.. ..++.....+..+.... . +....++...+.+++.++..+.......|..| +.+|+..|+.+..+.+|++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~- 410 (465)
T TIGR00894 333 TAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGL- 410 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHH-
Confidence 222 11111111111212221 2 22223333444444444444444445556665 5899999999999999995
Q ss_pred HhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 289 CSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 289 ~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
++|.+.|++.+..+. ..|...|++.+++.+++.++..++
T Consensus 411 i~p~l~g~~~~~~~~---------~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 411 IASTLAGNILSQDSK---------NVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HHHHhhheeeCCCCc---------hHHHHHHHHHHHHHHHHHHHeeee
Confidence 789999998875411 118999999988888887655443
No 46
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.65 E-value=9.2e-15 Score=142.94 Aligned_cols=174 Identities=9% Similarity=0.041 Sum_probs=145.4
Q ss_pred HHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHH
Q 018271 146 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~ 225 (358)
+..+.+..++...-.......+|++.+++|.+..+.++..+.+.++..++.+.+|+++||+ |||+.+..+..+.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~------Grk~~l~~~~~~~ 81 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI------GFKRLLMLGGTLF 81 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh------ccHHHHHHHHHHH
Confidence 3445556666666666777789999999999999999999999999999999999999999 7778888888888
Q ss_pred HHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhh-CCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC
Q 018271 226 SVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIF-GVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 303 (358)
Q Consensus 226 ~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f-~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~ 303 (358)
.++.+++. .++.+.+++.+++.|++.+...+.....+.+.+ |+++|++++|+......+|. .+||+++|.+.++.+
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~-~~gp~lgg~l~~~~g- 159 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGA-AFGPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccCC-
Confidence 88888777 677788888999999999887776667777776 67899999999999999999 589999999999887
Q ss_pred CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 304 GEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 304 ~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
|++.|++...+.++..++.....+
T Consensus 160 -----------wr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 160 -----------WGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999988777776655544433
No 47
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.64 E-value=4.7e-15 Score=138.31 Aligned_cols=171 Identities=12% Similarity=-0.002 Sum_probs=139.8
Q ss_pred HHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHH
Q 018271 147 WLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~ 226 (358)
|.++...++...........+|.+..+.|.+..+.+++.+...++..++.++.|+++||+ +||+.+..+.++..
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~------g~r~~~~~~~~~~~ 75 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRY------DRKKVMIGADLIRA 75 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh------chhHHHHHHHHHHH
Confidence 445566666666666677788889999999999999999999999999999999999999 66666776666655
Q ss_pred HHHHHHH-hc-----CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhh
Q 018271 227 VGHIVVA-SG-----FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN 300 (358)
Q Consensus 227 ~~~~l~~-~~-----~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~ 300 (358)
++.++.. .. +.+.+++.+++.|++.+...+...++++|.+|+++|++.+|+.+.+..+|. +++|.+++.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~l~~~l~~~ 154 (365)
T TIGR00900 76 VLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFY-IVGPGIGGLMYAT 154 (365)
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 5554443 33 566777888999999998888899999999999999999999999999999 5899999999988
Q ss_pred ccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 301 VASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 301 ~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
.+ |++.|++.++..+++.+..+.+
T Consensus 155 ~g------------~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 155 LG------------IKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred hh------------HHHHHHHHHHHHHHHHHHHHhc
Confidence 87 9999998887766665444333
No 48
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.64 E-value=6.6e-14 Score=131.81 Aligned_cols=172 Identities=13% Similarity=0.051 Sum_probs=122.8
Q ss_pred HHhhhchh--HHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 138 LQSVCTLN--FWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 138 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
++.++++. ++......++.....+....++|.+.+ +.|.+..+.+...+...+++.+++++.|+++||+ +|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~------g~ 284 (394)
T TIGR00883 211 RETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI------GR 284 (394)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh------ch
Confidence 44455543 666666666666666777788998885 5699998999999999999999999999999999 44
Q ss_pred HHHHHHHHHHHH-HHHH-HHH-h--cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHH-HHHhhhHHHH
Q 018271 215 PSFIAITLATMS-VGHI-VVA-S--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI-AIASPVGSYV 288 (358)
Q Consensus 215 ~~~~~~~~~~~~-~~~~-l~~-~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~-~~~~~ig~~i 288 (358)
|..+.....+.. .... ... . .+...+....++.|++.+..++...+++.|.+|++.|++++|+. +.+..+|+ .
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~-~ 363 (394)
T TIGR00883 285 RPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFG-G 363 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHh-h
Confidence 444443322222 2211 111 1 23334445567778888788888899999999999999999985 56666787 4
Q ss_pred HhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHH
Q 018271 289 CSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAF 327 (358)
Q Consensus 289 ~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~ 327 (358)
++|.+.|.+.|+.|. |+..++...++.+
T Consensus 364 ~~p~~~g~l~~~~g~-----------~~~~~~~~~~~~l 391 (394)
T TIGR00883 364 FAPYIAAALVAMTGD-----------WYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHHHcCc-----------chhHHHHHHHHHH
Confidence 799999999998875 7776666555433
No 49
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.64 E-value=5e-15 Score=144.12 Aligned_cols=174 Identities=16% Similarity=0.213 Sum_probs=146.1
Q ss_pred HHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHH
Q 018271 147 WLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~ 226 (358)
..+.+..++...........+|.+.+++|.+..+.++..+.+.++..++.++.|+++||+ +||+.+.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~------g~r~~~~~~~~~~~ 78 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF------GTRRLFLISTFAFT 78 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh------CcHHHHHHHHHHHH
Confidence 344455555555556677789999999999999999999999999999999999999999 77777888888888
Q ss_pred HHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCC
Q 018271 227 VGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE 305 (358)
Q Consensus 227 ~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~ 305 (358)
++.+++. .++...+++.+++.|++.+...+....++.|.+|+++|++++++...+..+|.. ++|.++|++.++.+
T Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~~--- 154 (485)
T TIGR00711 79 LGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPA-LGPTLGGWIIENYH--- 154 (485)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhh-hhhccHhHhccCcC---
Confidence 8777776 566777888999999999988888999999999999999999999999999994 89999999998877
Q ss_pred CCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 306 GNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 306 ~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
|++.|++.+.+.++..++..+..++
T Consensus 155 ---------w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 155 ---------WRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred ---------ceehhhhhhHHHHHHHHHHHHHcCC
Confidence 9999999888777776655544433
No 50
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.63 E-value=2.9e-15 Score=139.07 Aligned_cols=165 Identities=19% Similarity=0.264 Sum_probs=139.0
Q ss_pred HHHHHHhhhhhhhHHhcHH-HHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHH
Q 018271 150 FVAMLCGMGSGLATVNNIS-QIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVG 228 (358)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~-~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~ 228 (358)
++..++...........+| .+.+++|.+..+.+++.+...++..++.++.|+++||+ +||+.+.++.++.+++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~------g~r~~l~~~~~~~~~~ 75 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF------GRRRVLIIGLLLFALG 75 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-------HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCeeeEeehhhhhhhH
Confidence 3445555555566777788 67778899999999999999999999999999999999 6677788888888887
Q ss_pred HHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCC
Q 018271 229 HIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGN 307 (358)
Q Consensus 229 ~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~ 307 (358)
.++.. ..+.+.+++.+++.|++.+...+....++.|.+|+++|++.+|+.+.+..+|. +++|.+++.+.+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~l~~~l~~~~~----- 149 (352)
T PF07690_consen 76 SLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGS-ILGPLLGGFLISYFG----- 149 (352)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCHCH-----
T ss_pred HHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhh-hcccchhhhhhhccc-----
Confidence 44444 35656778889999999999999999999999999999999999999999999 589999999987777
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHH
Q 018271 308 SCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 308 ~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
|++.|++.+++.++.+++.
T Consensus 150 -------~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 150 -------WRWAFLISAILSLIAAILF 168 (352)
T ss_dssp -------HCCHHHHHHHHHHHHHHHH
T ss_pred -------cccccccccchhhhhhhhH
Confidence 9999999999888887643
No 51
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.63 E-value=3.3e-14 Score=134.66 Aligned_cols=168 Identities=13% Similarity=0.158 Sum_probs=137.6
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
.+...++.+++.....+......|.+.+++|.+..+.+++.+...++..++.++.|+++||+ |||+.+..+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~------g~r~~~~~~~~~ 86 (405)
T TIGR00891 13 AFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY------GRRLPMVTSIVL 86 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh------ccHHHHHHHHHH
Confidence 34455566666666666677788889899999999999999999999999999999999999 666777777777
Q ss_pred HHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC
Q 018271 225 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 303 (358)
Q Consensus 225 ~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~ 303 (358)
.+++.++.. .++.+.+++.+++.|++.+..++...+++.|.+|+++|+.+.|+.+.+..+|. +++|.+.+.+.+..+.
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGA-VVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCc
Confidence 777766665 56677788889999999998888889999999999999999999999999999 4889999988876541
Q ss_pred CCCCccccccchHHHHHHHHHHHHHH
Q 018271 304 GEGNSCNGTHCFMLSFLIMASVAFVG 329 (358)
Q Consensus 304 ~~~~~~~g~~~~~~~f~~~~~~~~~~ 329 (358)
+|++.|++.++..++.
T Consensus 166 ----------~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 166 ----------GWRALFFISILPIIFA 181 (405)
T ss_pred ----------cHHHHHHHHHHHHHHH
Confidence 1999998765554444
No 52
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.63 E-value=2.5e-14 Score=138.96 Aligned_cols=170 Identities=18% Similarity=0.215 Sum_probs=144.7
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHh---cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHH-HhhhcCCchHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGES---LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDI-VLHRMGWERPSFIA 219 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr-~~~k~~~gr~~~~~ 219 (358)
+.+|.+++..++...+++++..++|.|+++ +|++..+++++.+.+.++..++++++|+++|| + |||+.+.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~------G~~~~l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVW------GTKKTMV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhc------chHHHHH
Confidence 356777777888788889999999999875 79999999999999999999999999999999 7 7778888
Q ss_pred HHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcc---hHHHHHHHHHHhhhHHHHHhHHHHH
Q 018271 220 ITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGH---MGTIFNTIAIASPVGSYVCSVRIIG 295 (358)
Q Consensus 220 ~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~---~g~~~g~~~~~~~ig~~i~gp~i~g 295 (358)
++.++.+++.+++. ..+...+++.+++.|++.|...+...++++|.+++++ |++++++.+.+.++|+. +||++.|
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~-ig~~l~g 162 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSF-ISPLLAG 162 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHH-HHHHHHH
Confidence 88888888887776 3445566677788899998888899999999998764 88999999999999995 8999999
Q ss_pred HHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 296 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 296 ~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
++.++.+ |++.|++.++.++++.+.
T Consensus 163 ~l~~~~g------------~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 163 VIAENYG------------YHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHhcC------------hHHHHHHHHHHHHHHHHH
Confidence 9999877 999999988766665443
No 53
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.63 E-value=2.2e-14 Score=136.46 Aligned_cols=174 Identities=16% Similarity=0.126 Sum_probs=137.0
Q ss_pred HHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHH
Q 018271 147 WLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~ 226 (358)
...++..++............|.+.+++|.+..+.+++.+...++..++.++.|+++||+ +||+.+..+..+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~------g~r~~~~~~~~~~~ 91 (406)
T PRK11551 18 GLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI------GRKRILIVSVALFG 91 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCchhHHHHHHHHH
Confidence 334444444444445556677889999999999999999999999999999999999999 66666776766666
Q ss_pred HHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCC
Q 018271 227 VGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE 305 (358)
Q Consensus 227 ~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~ 305 (358)
++.++.. ..+.+.+.+.+++.|++.+...+...+++.|.+|+++|++++|+.+.+..+|.. ++|.+.+.+.+..+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~--- 167 (406)
T PRK11551 92 LFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGA-LASVIGVLAAGDAA--- 167 (406)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccccC---
Confidence 6665555 566677888899999999888888899999999999999999999999999995 78888888777666
Q ss_pred CCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 306 GNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 306 ~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
|+..|++.+++.++..++...+.++
T Consensus 168 ---------~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 168 ---------WRHIFYVGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999998877666655444443333
No 54
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.62 E-value=3.6e-15 Score=140.22 Aligned_cols=159 Identities=16% Similarity=0.230 Sum_probs=134.2
Q ss_pred hhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCch
Q 018271 160 GLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPG 238 (358)
Q Consensus 160 ~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~ 238 (358)
...+....|.+.+++|.+..+.+++.+...++..++.++.|+++||+ +||+.+..+.++.+++..++. ..+.+
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~------g~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF------GARKTLAVFIVIWGVFTGLQAFAGAYV 83 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc------CcceeeHHHHHHHHHHHHHHHHHcCHH
Confidence 34556677888889999999999999999999999999999999999 555556667666666666665 56677
Q ss_pred hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHH
Q 018271 239 NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLS 318 (358)
Q Consensus 239 ~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~ 318 (358)
.+++.+++.|++.+...+....++.|.+|+++|++.+|+.+....+|. +++|.+.+.+.+..+ |++.
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~------------~~~~ 150 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGG-IIGGPLVGWILIHFS------------WQWA 150 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHhCC------------chHH
Confidence 788889999999998888999999999999999999999999999999 489999999988877 9999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 018271 319 FLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 319 f~~~~~~~~~~~~~~~~~~ 337 (358)
|++.+++.++..++.+++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~ 169 (399)
T TIGR00893 151 FIIEGVLGIIWGVLWLKFI 169 (399)
T ss_pred HHHHHHHHHHHHHHhhhee
Confidence 9998887777665554443
No 55
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.62 E-value=3.3e-14 Score=135.31 Aligned_cols=197 Identities=10% Similarity=0.078 Sum_probs=138.0
Q ss_pred ccccHHHhhhchhH----HHHHHHHHHhh-hhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHh
Q 018271 133 EDMNILQSVCTLNF----WLLFVAMLCGM-GSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVL 207 (358)
Q Consensus 133 ~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~ 207 (358)
+..+.+++++++.. ++.....++.. .+......+...+.++.|++..++.+.....++.+.+..+++.++.||.
T Consensus 254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~- 332 (485)
T KOG0569|consen 254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL- 332 (485)
T ss_pred cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 44567788776432 22222333333 2334555666678888899999999999999999999999999999999
Q ss_pred hhcCCchHHHHHHHHHHHHHHHHHHH-h---cC---chh---HHHHHHHHHhhhh-cccccHHHHHHHhhCCcchHHHHH
Q 018271 208 HRMGWERPSFIAITLATMSVGHIVVA-S---GF---PGN---LYVGSIIVGVCYG-CQWSLMPTITYEIFGVGHMGTIFN 276 (358)
Q Consensus 208 ~k~~~gr~~~~~~~~~~~~~~~~l~~-~---~~---~~~---l~~~~~l~g~~~g-~~~~~~~~~~~e~f~~~~~g~~~g 276 (358)
|||++++.+..++.+..+++. . .+ .+. .++..+++.++++ +..++.+-+.+|+||++.|.++.+
T Consensus 333 -----gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s 407 (485)
T KOG0569|consen 333 -----GRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQS 407 (485)
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHH
Confidence 788888888877777666543 1 11 111 1233334444333 335677889999999999999999
Q ss_pred HHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 018271 277 TIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVL 349 (358)
Q Consensus 277 ~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (358)
+....+-+..++. ...+-.+.+..|. ..|.+..+.+++..+..+...+|||++...++.
T Consensus 408 ~~~~~~w~~~fiv-~~~fp~l~~~~g~-------------~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~ 466 (485)
T KOG0569|consen 408 VATAVNWLSNFIV-GFAFPPLQNVIGP-------------YVFILFVIPLAIFLIYLYRYLPETKGRTPYEII 466 (485)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhcc-------------hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHH
Confidence 9999888888643 4556666666662 577777777888777777778899877655443
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.62 E-value=1.8e-14 Score=136.58 Aligned_cols=171 Identities=12% Similarity=0.137 Sum_probs=139.6
Q ss_pred HHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHH
Q 018271 150 FVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGH 229 (358)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~ 229 (358)
....+....+...+...+|.+.+++|.+..+.++..+.+.++..++.++.|+++||+ +||+.+..+.++..++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~------g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS------GRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh------CChHHHHHHHHHHHHHH
Confidence 334444455555666789999999999999999999999999999999999999999 66677777777777777
Q ss_pred HHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCc
Q 018271 230 IVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNS 308 (358)
Q Consensus 230 ~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~ 308 (358)
+++. .++...+++.+++.|++.+..++..+.++.|.+++++|++..|+.+....+|. +++|.+++.+.+..+
T Consensus 83 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~-~~~~~i~~~l~~~~g------ 155 (392)
T PRK10473 83 LLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIP-VLAPVLGHLIMLKFP------ 155 (392)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcC------
Confidence 6665 45566677788899998888888889999999999999999999999988988 478999888887766
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 309 CNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 309 ~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
|++.|++.+++.++..++.....++
T Consensus 156 ------~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 156 ------WQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999988877777665444443
No 57
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.62 E-value=2.7e-14 Score=136.41 Aligned_cols=164 Identities=13% Similarity=0.064 Sum_probs=135.8
Q ss_pred hhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hc
Q 018271 157 MGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SG 235 (358)
Q Consensus 157 ~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~ 235 (358)
......+...+|.+.+++|.+..+.++.++++.++..++.+++|+++||+ |||+.+..+..+.+++.++.. .+
T Consensus 29 ~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~------Grr~~l~~~~~~~~~~~~~~~~a~ 102 (413)
T PRK15403 29 YLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI------GRRPVLITGALIFTLACAATLFTT 102 (413)
T ss_pred HHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc------CchHHHHHHHHHHHHHHHHHHHcC
Confidence 33445566778888899999999999999999999999999999999999 677777777777777777666 56
Q ss_pred CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccch
Q 018271 236 FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCF 315 (358)
Q Consensus 236 ~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~ 315 (358)
+...+++.+++.|++.+...+..+.++.|.++++++++.+++.+.+..+|. ++||++++.+.+..+ |
T Consensus 103 ~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~lg~~l~~~~g------------w 169 (413)
T PRK15403 103 SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAP-IIGPLSGAALMHFVH------------W 169 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcC------------H
Confidence 677788899999998876566667889999999999999999999999998 489999999888776 9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 316 MLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 316 ~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
++.|++.+++.+++.+..++..++
T Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999988877776554443343
No 58
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.62 E-value=3.2e-14 Score=133.26 Aligned_cols=163 Identities=13% Similarity=0.141 Sum_probs=119.3
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
..++.++++.+|.+.+..++.......+..+.|.+.++ .|++..+++.+.+...+++.+++++.|+++||..+++ |
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~---~ 284 (379)
T TIGR00881 208 FLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGR---R 284 (379)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc---c
Confidence 34667888999988888887777777888899988864 6999999999999999999999999999999864321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHh---cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhH
Q 018271 215 PSFIAITLATMSVGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 291 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp 291 (358)
............+....+.. .+.....+..++.|++..+.......+..|.+|+++||++.|+.+....+|+. ++|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~~~ 363 (379)
T TIGR00881 285 GPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGI-LAG 363 (379)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhh-hhh
Confidence 12222222222222222221 12223344555666655555556677889999999999999999999999995 899
Q ss_pred HHHHHHHhhcc
Q 018271 292 RIIGYIYDNVA 302 (358)
Q Consensus 292 ~i~g~l~~~~g 302 (358)
.+.|.+.|..|
T Consensus 364 ~~~g~l~~~~g 374 (379)
T TIGR00881 364 LPLGYLADGFG 374 (379)
T ss_pred hhHHHHHHhhc
Confidence 99999999887
No 59
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.61 E-value=2.5e-14 Score=134.37 Aligned_cols=162 Identities=12% Similarity=0.030 Sum_probs=129.0
Q ss_pred hhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHh-cC
Q 018271 158 GSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GF 236 (358)
Q Consensus 158 ~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~-~~ 236 (358)
.....+...+|.+.+++|.|.++.+++.+.+.++..++.+..|+++||+ +||.++..+......+...... .+
T Consensus 5 ~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~------grr~~~~~~~~~~~~~~~~~~~~~~ 78 (368)
T TIGR00903 5 AIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA------FKRWFLFGSLATFAAAAGRLLDPFN 78 (368)
T ss_pred HHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------cchHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445667789999999999999999999999999999999999999999 5555555444444443332232 56
Q ss_pred chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchH
Q 018271 237 PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFM 316 (358)
Q Consensus 237 ~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~ 316 (358)
...+++.+++.|++.+.. ......++|.+|+++|+++.++.+.+..+|.. ++|++.+.+.+..| ||
T Consensus 79 ~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~-l~~~~~~~l~~~~g------------Wr 144 (368)
T TIGR00903 79 YEWLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGII-FALAAGLKIYTAGG------------LQ 144 (368)
T ss_pred HHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHccc------------hH
Confidence 777889999999998853 44555668999999999999999999999995 88999999988777 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 018271 317 LSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 317 ~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
+.|++.+++.++..++.++..++
T Consensus 145 ~~f~~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 145 LLIIPIAAVAAAGIILVLAALPA 167 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999888887776665555443
No 60
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.61 E-value=1e-13 Score=131.37 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=104.9
Q ss_pred hhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHH-HHHh-c
Q 018271 159 SGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHI-VVAS-G 235 (358)
Q Consensus 159 ~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~-l~~~-~ 235 (358)
.......++|.+.+ +.|++..+.+++.+...++..+++++.|+++||+ +|+..+.++..+..+..+ ++.. .
T Consensus 253 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~------g~~~~~~~~~~~~~~~~~~~~~~~~ 326 (405)
T TIGR00891 253 YSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL------GRRKAYVCSLLAGQLLIIPVFAIGA 326 (405)
T ss_pred HHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CchhhhHHHHHHHHHHHHHHHHhCC
Confidence 33455667887776 5699999999999999999999999999999999 444555555444322222 2222 2
Q ss_pred CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC
Q 018271 236 FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 303 (358)
Q Consensus 236 ~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~ 303 (358)
+...+.+..++.+++.++.++..+.++.|.+|+++||+++|+.+....+|+. ++|++.|.+.|+.|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~-~g~~~~g~l~~~~g~ 393 (405)
T TIGR00891 327 NVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGA-LAPIIGALLAQRLDE 393 (405)
T ss_pred chHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHH-HHHHHHHHHHHhccc
Confidence 3333444446666666777778889999999999999999999999999995 899999999999886
No 61
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.61 E-value=8.3e-14 Score=135.50 Aligned_cols=178 Identities=12% Similarity=0.111 Sum_probs=126.9
Q ss_pred HHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHH
Q 018271 148 LLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSV 227 (358)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~ 227 (358)
..++.+++.....+.+...+|.+.+++|++..+.++..+...++..++.++.|+++||+ +||+.+..+.++.++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~------G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 40 LSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY------GPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CChHHHHHHHHHHHH
Confidence 33444444444445666678889899999999999998999999999999999999999 666667777777777
Q ss_pred HHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCC
Q 018271 228 GHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEG 306 (358)
Q Consensus 228 ~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~ 306 (358)
+.++.. ..+...+++.+++.|++.+... ....+++|.+|+++||++.|+.+....+|+. +++.+.+.+.+.....
T Consensus 114 ~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~-~~~~~~~~i~~~~~~~-- 189 (476)
T PLN00028 114 AVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGG-VTQLLMPLVFPLIKDA-- 189 (476)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc--
Confidence 766665 4566667777888898877543 3456789999999999999999877777664 5555555443321000
Q ss_pred CccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 307 NSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 307 ~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
.+.+..+||+.|++.+++.++..++.+++
T Consensus 190 -~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 190 -GAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred -CCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00011239999999998887776555444
No 62
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.61 E-value=4.2e-13 Score=126.05 Aligned_cols=174 Identities=11% Similarity=0.074 Sum_probs=126.4
Q ss_pred hhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH
Q 018271 140 SVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 218 (358)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~ 218 (358)
.+++++++.+....++..........++|.+.+ ++|.+..+.+++.........++.++.|+++||+ +||..+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~------g~~~~~ 268 (375)
T TIGR00899 195 LLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF------GKRRLM 268 (375)
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh------cchhHH
Confidence 345566665555555444444455567777764 6799998888888877778888999999999999 455555
Q ss_pred HHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 219 AITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 219 ~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
.++.++..+...++. .++.+.+++..++.|++.+...+....+..|.+|+ +++++.|+.+....+|.. ++|.+.|.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~-~g~~~~g~~ 346 (375)
T TIGR00899 269 LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWI-IAGSVGGIL 346 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 555444444433333 33444455566777888777777777888898875 567999999998889984 899999999
Q ss_pred HhhccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 298 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 298 ~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
.|..| |+..|++.+++.+++.+..
T Consensus 347 ~~~~g------------~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 347 AERWS------------YHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHhcc------------chhHHHHHHHHHHHHHHHH
Confidence 99887 9999999888887777654
No 63
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.60 E-value=6.5e-14 Score=133.21 Aligned_cols=175 Identities=14% Similarity=0.104 Sum_probs=138.5
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchh-----hHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSA-----INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 218 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~-----a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~ 218 (358)
+.+..+++..++...........+|.+.+++|.+..+ .++..++..++..++.++.|+++||+ +||+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~------g~r~~~ 87 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK------GRKIML 87 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh------CcHHHH
Confidence 3555667777777666677788899999999988654 37788889999999999999999999 666667
Q ss_pred HHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 219 AITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 219 ~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
..+.++.+++.+++. .++.+.+++.+++.|++.+ ..+....++.+.+++++|+++.|+.+.+..+|. +++|.+.|.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~l 165 (408)
T PRK09874 88 LRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGA-LLGPLAGGLL 165 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 777777776666655 4566677778888888654 456666788899999999999999999999998 4899999999
Q ss_pred HhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 298 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 298 ~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
.+..+ |++.|++.+++.+++.+..+++.+
T Consensus 166 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 166 ADSYG------------LRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred HHHhC------------HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 98877 999999998887777665554443
No 64
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.60 E-value=2e-13 Score=127.33 Aligned_cols=159 Identities=14% Similarity=0.090 Sum_probs=127.3
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHH-hcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATV-NNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
.++.++++.++.+.+..++......... .+.|.+.++ +|.+..+.+.+.+...++..++.++.+++.||+ +|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~ 276 (365)
T TIGR00900 203 IKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF------KR 276 (365)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh------ch
Confidence 4567788888877777766666655555 788888886 699999999999999999999999999999998 55
Q ss_pred HHHHHHHHHHHHHHHHHHH-hcC-chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 215 PSFIAITLATMSVGHIVVA-SGF-PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~-~~~-~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
+..+..+..+.++...++. ..+ .+.+++..++.|++.+...+....++.|.+|+++||+.+|+.+....+|.. ++|.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~g~~ 355 (365)
T TIGR00900 277 MALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP-LGLI 355 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 6666665555555555544 332 445566778889988888888889999999999999999999999999995 8999
Q ss_pred HHHHHHhhcc
Q 018271 293 IIGYIYDNVA 302 (358)
Q Consensus 293 i~g~l~~~~g 302 (358)
+.|.+.|..|
T Consensus 356 ~~g~l~~~~g 365 (365)
T TIGR00900 356 LAGPLADHLG 365 (365)
T ss_pred HHHHHHHHcC
Confidence 9999998754
No 65
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.60 E-value=7e-14 Score=133.92 Aligned_cols=160 Identities=13% Similarity=0.074 Sum_probs=134.1
Q ss_pred HHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHH
Q 018271 146 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~ 225 (358)
+...++.++......+.....+|.+.+++|.+..+.++..+...++..++.++.|+++||+ +||+.+..+.++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~------g~r~~l~~~~~~~ 93 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF------GRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CChHHHHHHHHHH
Confidence 4455555555555555666677888889999999999999999999999999999999999 7778888888888
Q ss_pred HHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCC
Q 018271 226 SVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 304 (358)
Q Consensus 226 ~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~ 304 (358)
+++.++.. ..+.+.+++.+++.|++.+..++....++.|.+|+++|+++.|+...+..+|.. ++|.+.+.+.+..+
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~-~~~~l~~~l~~~~~-- 170 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNI-IAAYFMPSFAEAYG-- 170 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHH-HHHHHHHHHcccCC--
Confidence 88777666 566777888999999999988888899999999999999999999999999994 78888888888776
Q ss_pred CCCccccccchHHHHHHHHH
Q 018271 305 EGNSCNGTHCFMLSFLIMAS 324 (358)
Q Consensus 305 ~~~~~~g~~~~~~~f~~~~~ 324 (358)
|++.|++...
T Consensus 171 ----------w~~~f~i~~~ 180 (426)
T PRK12307 171 ----------WRAAFFVGLL 180 (426)
T ss_pred ----------HHHHHHHHHH
Confidence 9999987543
No 66
>PRK03699 putative transporter; Provisional
Probab=99.60 E-value=8.9e-14 Score=132.01 Aligned_cols=171 Identities=12% Similarity=0.135 Sum_probs=138.4
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
+-+|...+.+++.......+...+|.+.+++|+|.++.++..+...++..++.++.|+++||+ +||+.+..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~------g~r~~~~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII------PLKRQLIFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hHHHHHHHHHH
Confidence 345666666666655556677788999999999999999999999999999999999999999 66667777777
Q ss_pred HHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhcc
Q 018271 224 TMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 224 ~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g 302 (358)
+.+++.++.. .++...+++.+++.|++.+...+....++.|.+|+++|+...++.+....+|+. ++|.+.+.+.+...
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~ 159 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGM-IFPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccc
Confidence 7777766666 456667778889999998888888889999999999999999998888888884 78888888876433
Q ss_pred CCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 303 SGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 303 ~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
+ |++.|.+.+++.++..++
T Consensus 160 g-----------w~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 160 E-----------WYWVYACIGLVYVAIFIL 178 (394)
T ss_pred c-----------HHHHHHHHHHHHHHHHHH
Confidence 2 999999888776665544
No 67
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.60 E-value=2.3e-13 Score=129.41 Aligned_cols=178 Identities=15% Similarity=0.085 Sum_probs=126.2
Q ss_pred HhhhchhHHHHHH-HHHHhhhhhhhHHhcHHHHHHhcCCCchh----hHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCc
Q 018271 139 QSVCTLNFWLLFV-AMLCGMGSGLATVNNISQIGESLGYPTSA----INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWE 213 (358)
Q Consensus 139 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~G~s~~~----a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~g 213 (358)
+.+++++++...+ ..++.......+..+++.+.++.+.+..+ .+.+.++..++..++++..|+++||+ +
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~------g 286 (408)
T PRK09874 213 TSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI------G 286 (408)
T ss_pred HhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------c
Confidence 3455666554332 22222233334556677777765433222 34555667788889999999999999 5
Q ss_pred hHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 214 RPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 214 r~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
|+..+..+..+..+..+.+. ..+.+.+++..++.|++.+...+.....+.+..+++++|+.+|+.+....+|.. +||.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-~gp~ 365 (408)
T PRK09874 287 PEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNV-TGPL 365 (408)
T ss_pred cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHH-hhHH
Confidence 55556666555555555444 344555666777889888888888888888888989999999999999999985 8999
Q ss_pred HHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 018271 293 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 293 i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
++|.+.+..| |+..|++.+++.+++++..+.
T Consensus 366 ~~G~l~~~~g------------~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 366 MGAAISANYG------------FRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHhhcc------------hhHHHHHHHHHHHHHHHHHHH
Confidence 9999999887 999999999888887765533
No 68
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.60 E-value=5.3e-13 Score=130.30 Aligned_cols=181 Identities=12% Similarity=0.152 Sum_probs=124.8
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHH-HhcCCCchhhHHHHH-HHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVS-LWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~G~s~~~a~~~~~-~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
.++.++++..|.+.+..++..........+.++++ ++.|++..+.+++.. ...++.++|.+++|+++||++ +
T Consensus 215 l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g------~ 288 (491)
T PRK11010 215 LRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLS------L 288 (491)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------H
Confidence 45566677777665555555444445556666665 467999999999874 566899999999999999994 4
Q ss_pred HHHHHHHHHHHHHHHH---HHHhc--CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHH
Q 018271 215 PSFIAITLATMSVGHI---VVASG--FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVC 289 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~---l~~~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~ 289 (358)
+..+.++.++.++..+ ++... +...+....++..++.|...+...++..++.+++..++.+|+.+....+|.. +
T Consensus 289 ~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~-~ 367 (491)
T PRK11010 289 FRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRV-Y 367 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHH-H
Confidence 3334433333333222 22221 2222333344444444444455678888899989999999999999999985 6
Q ss_pred hHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 290 SVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 290 gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
++++.|++.|..| |+..|.+.+++++++.+.....
T Consensus 368 ~~~~~G~l~~~~G------------~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 368 VGPVAGWFVEAHG------------WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHhC------------hHHHHHHHHHHHHHHHHHHHHH
Confidence 7778999999887 9999999998888887665544
No 69
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.60 E-value=1.3e-13 Score=134.86 Aligned_cols=176 Identities=15% Similarity=0.195 Sum_probs=138.4
Q ss_pred Hhhhch-hHHHHHHHHHHhhhhhhhHHhcHHHHH-HhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHH-HhhhcCCchH
Q 018271 139 QSVCTL-NFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDI-VLHRMGWERP 215 (358)
Q Consensus 139 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr-~~~k~~~gr~ 215 (358)
+.++++ .+|.+++..++...+++.+..+++.++ +++|++.+++++..+.+........+++|+++|| + |||
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~------G~r 88 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVL------GTK 88 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------chH
Confidence 344665 588888888888888899999999887 4789999888888777766666666789999999 6 666
Q ss_pred HHHHHHHHHHHHHHHHHHh-c-CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcc--hHHHHHHHHHHhhhHHHHHhH
Q 018271 216 SFIAITLATMSVGHIVVAS-G-FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGH--MGTIFNTIAIASPVGSYVCSV 291 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~~-~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~--~g~~~g~~~~~~~ig~~i~gp 291 (358)
..+..+.++.+++.+++.. . ....+++..++.|++.|...+...+++.|.||+++ +..++++.+.+.++|+. +||
T Consensus 89 ~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~-~gp 167 (500)
T PRK09584 89 RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF-FSM 167 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH-HHH
Confidence 7777787777777766653 2 23345566778889888888888899999998653 45678888999999994 899
Q ss_pred HHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 292 RIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 292 ~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
++.|++.+..| |++.|++.++..+++.+..
T Consensus 168 ~i~g~l~~~~g------------~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 168 LATPWLAAKYG------------WSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHHhhC------------HHHHHHHHHHHHHHHHHHH
Confidence 99999999887 9999998877666665443
No 70
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.60 E-value=7.5e-14 Score=132.42 Aligned_cols=175 Identities=14% Similarity=0.167 Sum_probs=138.3
Q ss_pred HHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHH
Q 018271 146 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 225 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~ 225 (358)
.+......++.......+...+|.+.+++|.|..+.++..+...++..++.++.|+++||+ +||+.+..+..+.
T Consensus 10 l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~------grr~~~~~~~~~~ 83 (394)
T PRK11652 10 LFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV------GRRPVILVGMSIF 83 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc------CChHHHHHHHHHH
Confidence 3444444445555555667788999999999999999999999999999999999999999 6666777777777
Q ss_pred HHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCC
Q 018271 226 SVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 304 (358)
Q Consensus 226 ~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~ 304 (358)
.++.++.. ..+...+++.+++.|++.+...+....+..|.++.++++.+.++.+.+..++. +++|.+.+.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~i~~~l~~~~g-- 160 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSP-LLAPLIGGLLTTLFG-- 160 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccC--
Confidence 76666655 45666778888999988877666777788899998999999999999999888 489999999988777
Q ss_pred CCCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 305 EGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 305 ~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
|++.|++.+++.++..++..+..++
T Consensus 161 ----------~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 161 ----------WRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999998887766555444343333
No 71
>TIGR00895 2A0115 benzoate transport.
Probab=99.60 E-value=3.8e-14 Score=133.75 Aligned_cols=163 Identities=15% Similarity=0.109 Sum_probs=134.0
Q ss_pred hhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-h
Q 018271 156 GMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-S 234 (358)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~ 234 (358)
............|.+.+++|++..+.+++.+...++..++.++.|+++||+ +||..+..+.++..++.++.. .
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~------g~~~~~~~~~~~~~~~~~~~~~~ 102 (398)
T TIGR00895 29 DGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI------GRKRVLLWSILLFSVFTLLCALA 102 (398)
T ss_pred HHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh------hhHHHHHHHHHHHHHHHHHHHHc
Confidence 333344556678888899999999999999999999999999999999999 666777777777777666655 4
Q ss_pred cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccc
Q 018271 235 GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHC 314 (358)
Q Consensus 235 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~ 314 (358)
.+...+++..++.|++.+..++...+++.|.+|+++|+++.|+.+.+..+|.. ++|.+.|.+.+..+
T Consensus 103 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~g------------ 169 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAA-VGGFLAGWLIPVFG------------ 169 (398)
T ss_pred cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHH-HHHHHHHHHhhccc------------
Confidence 56667778889999999988999999999999999999999999999999994 89999999998877
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 018271 315 FMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 315 ~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
|+..|++.+++.++..++.+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~ 192 (398)
T TIGR00895 170 WRSLFYVGGIAPLLLLLLLMRFL 192 (398)
T ss_pred ceeehhhhhhHHHHHHHHHHHhC
Confidence 99999888766665555444443
No 72
>PRK15075 citrate-proton symporter; Provisional
Probab=99.60 E-value=9.6e-13 Score=126.60 Aligned_cols=155 Identities=12% Similarity=0.025 Sum_probs=103.9
Q ss_pred hhchhHHHHH-HHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH
Q 018271 141 VCTLNFWLLF-VAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 218 (358)
Q Consensus 141 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~ 218 (358)
.++++.|... ...++.....+....|.|.|.++ +|++..+++++.....+++.++.++.|+++||++ ||+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g------~r~~~ 307 (434)
T PRK15075 234 AANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIG------RRPVL 307 (434)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------chHHH
Confidence 3444555433 23333444556778899999886 6999888888888899999999999999999994 44444
Q ss_pred HHHHHHHHHHH-HH--HHhcCc--hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHH-HhhhHHHHHhHH
Q 018271 219 AITLATMSVGH-IV--VASGFP--GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAI-ASPVGSYVCSVR 292 (358)
Q Consensus 219 ~~~~~~~~~~~-~l--~~~~~~--~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~-~~~ig~~i~gp~ 292 (358)
..+..+..+.. .. ....+. .......++.+++.+...+..+.+..|.+|++.|+++.|+.+. +..+++. ++|.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~-~~p~ 386 (434)
T PRK15075 308 IAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGG-FTPA 386 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhh-hHHH
Confidence 44333322211 11 111222 2233334455666666666667889999999999999999744 4444464 6899
Q ss_pred HHHHHHhhcc
Q 018271 293 IIGYIYDNVA 302 (358)
Q Consensus 293 i~g~l~~~~g 302 (358)
+.|++.|..|
T Consensus 387 ~~g~i~~~~g 396 (434)
T PRK15075 387 ISTWLIHVTG 396 (434)
T ss_pred HHHHHHHhcC
Confidence 9999999877
No 73
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.59 E-value=7.6e-14 Score=132.93 Aligned_cols=161 Identities=9% Similarity=0.032 Sum_probs=131.6
Q ss_pred hhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCc
Q 018271 159 SGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFP 237 (358)
Q Consensus 159 ~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~ 237 (358)
....+...+|.+.+++|.+..+.++..+.+.++..++.++.|+++||+ +||+.+..+..+..++.++.. .++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~------g~r~~l~~~~~~~~~~~~~~~~~~~~ 101 (406)
T PRK15402 28 ANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI------GRRPVMLAGVAFFILTCLAILLAQSI 101 (406)
T ss_pred hhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CChHHHHHHHHHHHHHHHHHHHHccH
Confidence 344566678888899999999999999999999999999999999999 666777777777776666655 5666
Q ss_pred hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHH
Q 018271 238 GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFML 317 (358)
Q Consensus 238 ~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~ 317 (358)
+.+++.+++.|++.+...+..+..+.|.++++++++..++......++. .++|.+.+.+.+..+ |++
T Consensus 102 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~i~~~l~~~~~------------w~~ 168 (406)
T PRK15402 102 EQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAP-LLGPLVGAALIHVLP------------WRG 168 (406)
T ss_pred HHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHccC------------ccH
Confidence 6777888999988887777788899999999999999999887777887 489999999988776 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 018271 318 SFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 318 ~f~~~~~~~~~~~~~~~~~~~ 338 (358)
.|++.+++.+++.+..+...+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~ 189 (406)
T PRK15402 169 MFVLFAALAALSFFGLWRAMP 189 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 999988888777655444333
No 74
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.59 E-value=6e-13 Score=126.39 Aligned_cols=157 Identities=12% Similarity=0.127 Sum_probs=121.1
Q ss_pred hhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCc
Q 018271 159 SGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFP 237 (358)
Q Consensus 159 ~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~ 237 (358)
.......+++.+.++.|++ ..+...+.+.++..+++++.|++.||+ ++++.+..+..+.+++.+++. .++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T PRK05122 231 GFGTIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRL------GGLRVAIVSLLVEILGLLLLWLAPSP 302 (399)
T ss_pred HHHHHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHh------ccHHHHHHHHHHHHHHHHHHHHhccH
Confidence 3344556778777777774 456667788889999999999999999 555556666666666655554 4444
Q ss_pred hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHH
Q 018271 238 GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFML 317 (358)
Q Consensus 238 ~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~ 317 (358)
..+++..++.|++.+..++.......|.+|+++||+++|+.+....+|.. ++|++.|.+.+..| |+.
T Consensus 303 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~~~~~~g~l~~~~g------------~~~ 369 (399)
T PRK05122 303 WMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLG-ITGPLAGLVASWFG------------YPS 369 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC------------HHH
Confidence 55566678888888877777777788999999999999999999999985 78889999999887 999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 018271 318 SFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 318 ~f~~~~~~~~~~~~~~~~~ 336 (358)
.|++.+++.+++.++.+.+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 370 IFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999888888776555443
No 75
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.59 E-value=5.5e-14 Score=131.65 Aligned_cols=181 Identities=15% Similarity=0.179 Sum_probs=132.1
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHH-HHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQ-IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
.+|..++.+++.....+.+..++|+ +.+++|+|..+.+++.+...++..++.++.|+++||+ +||+.+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~------g~r~~~~~~~~ 75 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF------GPRYTTTLSLL 75 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh------CchHHHHHHHH
Confidence 4677788888777777888889996 7778999999999999999999999999999999999 66677777878
Q ss_pred HHHHHHHHHH-hc-CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhc
Q 018271 224 TMSVGHIVVA-SG-FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 301 (358)
Q Consensus 224 ~~~~~~~l~~-~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~ 301 (358)
+.+++.+++. .. +.+.+++.+++.|++.+ .+.....++.|.+|+++|++..++......+|.. +++.+.+.+.+..
T Consensus 76 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~i~~~l~~~~ 153 (366)
T TIGR00886 76 LLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGG-VAQFVMPPIIGSL 153 (366)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHH-HHHHHHHHHHHHH
Confidence 7777777666 45 66777788889998854 4556678899999999999999998876666663 5666665555422
Q ss_pred cCCCCCccccccchHHHHHH-HHHHHHHHHHHHHH
Q 018271 302 ASGEGNSCNGTHCFMLSFLI-MASVAFVGCLVAFL 335 (358)
Q Consensus 302 g~~~~~~~~g~~~~~~~f~~-~~~~~~~~~~~~~~ 335 (358)
.... ...+..+|++.|++ .+++..+..++.+.
T Consensus 154 ~~~~--~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 186 (366)
T TIGR00886 154 IFGA--GLPAHLAWGWAFVIVPAGILLLPALLIFF 186 (366)
T ss_pred Hhcc--cccccccccchhHHHHHHHHHHHHHHHHH
Confidence 1000 00011139998844 34444444433333
No 76
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.59 E-value=5e-15 Score=138.73 Aligned_cols=167 Identities=18% Similarity=0.166 Sum_probs=135.6
Q ss_pred HHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHH
Q 018271 153 MLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVV 232 (358)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~ 232 (358)
+++.......+....|.+.+++|++..+.+++.+...++..++.++.|+++||+ +||+.+..+..+..++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~------g~r~~~~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS------NPRVFLPIGLILCAIVNLFF 77 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh------CCeehhHHHHHHHHHHHHHH
Confidence 344444555677788888889999999999999999999999999999999999 66667777777777777766
Q ss_pred H-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhH-HHHHHHHhhccCCCCCccc
Q 018271 233 A-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV-RIIGYIYDNVASGEGNSCN 310 (358)
Q Consensus 233 ~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp-~i~g~l~~~~g~~~~~~~~ 310 (358)
. ..+.+.+++.+++.|++.+...+...+++.|.+|+++|++..|+.+.+..+|.. ++| .+.+.+.+..+
T Consensus 78 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~-------- 148 (379)
T TIGR00881 78 GFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGG-LLPPLVLFGIAELYS-------- 148 (379)
T ss_pred HHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHH-HHHHHHHHHHHhcCC--------
Confidence 6 566677888899999999988999999999999999999999999999999995 778 45556656555
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 311 GTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 311 g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
|++.|++.+++.++..+..+++.+
T Consensus 149 ----~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T TIGR00881 149 ----WHWVFIVPGIIAIIVSLICFLLLR 172 (379)
T ss_pred ----chhHHHHHHHHHHHHHHHHheeeC
Confidence 999999888777766555544443
No 77
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.59 E-value=1.1e-12 Score=118.34 Aligned_cols=178 Identities=11% Similarity=0.064 Sum_probs=141.7
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
..++|++..|.+.+.+.+.+..+|..+.|+|.++.|.|+|..+++.++++..+.+....+...++.+|.. .+|+.
T Consensus 202 ~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~-----n~r~~ 276 (395)
T COG2807 202 RKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSK-----NQRPL 276 (395)
T ss_pred cccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhc-----ccchH
Confidence 3467889999999999999999999999999999999999999999999999999999999999999852 56666
Q ss_pred HHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCC-cchHHHHHHHHHHhhhHHHHHhHHHHHH
Q 018271 218 IAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFNTIAIASPVGSYVCSVRIIGY 296 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~-~~~g~~~g~~~~~~~ig~~i~gp~i~g~ 296 (358)
......++.++.+.+........+...+++|++.|+.+++....+.+.... +.-+.-.|+.+..+.+=+. +||.+.|+
T Consensus 277 ~~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa-~GP~l~G~ 355 (395)
T COG2807 277 VVLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAA-FGPWLFGF 355 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHh-hhhhhHhH
Confidence 666666666666655422222333346899999999999988888877654 4456777777666666553 79999999
Q ss_pred HHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 297 IYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 297 l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
+.|..|+ |+..++..+.+.++..+.
T Consensus 356 lhDa~gs-----------w~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 356 LHDATGS-----------WSAPLVLLALATLLMLIF 380 (395)
T ss_pred HHHhcCC-----------hHHHHHHHHHHHHHHHHH
Confidence 9999998 999988777766655543
No 78
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.59 E-value=4e-13 Score=125.59 Aligned_cols=159 Identities=13% Similarity=0.083 Sum_probs=120.5
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
++.+|++.+|.+.+..++.....+....++|.+.++.|++..+.+.+.+...++.++++++.|+++||++ +|+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~-----~~~~~ 265 (355)
T TIGR00896 191 VRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVK-----DQRGI 265 (355)
T ss_pred chhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhc-----cchHH
Confidence 3456788888777666666667777888999999999999999999999999999999999999999994 34444
Q ss_pred HHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhC-CcchHHHHHHHHHHhhhHHHHHhHHHHH
Q 018271 218 IAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGSYVCSVRIIG 295 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-~~~~g~~~g~~~~~~~ig~~i~gp~i~g 295 (358)
+.++..+.+++.+.+. ..+.. .....++.|++.+..++.....+.+..+ ++++++.+|+.+..+.++.. ++|.+.|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~gp~~~G 343 (355)
T TIGR00896 266 VAVLAVLQLVGLCGLLFAPMHG-LWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAA-LGPLFVG 343 (355)
T ss_pred HHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 5555555555544443 22222 2234567888888888776666665554 46678999999888888884 7999999
Q ss_pred HHHhhccC
Q 018271 296 YIYDNVAS 303 (358)
Q Consensus 296 ~l~~~~g~ 303 (358)
++.|+.|+
T Consensus 344 ~l~~~~g~ 351 (355)
T TIGR00896 344 VLHDISGN 351 (355)
T ss_pred HHHHHhcc
Confidence 99999875
No 79
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.58 E-value=3.1e-13 Score=132.05 Aligned_cols=150 Identities=11% Similarity=0.046 Sum_probs=109.8
Q ss_pred hHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCch-
Q 018271 162 ATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPG- 238 (358)
Q Consensus 162 ~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~- 238 (358)
....++|.+++ ++|++..+++++.+...++..+|+++.|+++||+ +|+..+.++..+..+..+++. ..+..
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL------GTRKAYVCSLLISQLLIIPVFAIGGANV 366 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cchHHHHHHHHHHHHHHHHHhhccccHH
Confidence 35568899986 7899999999999999999999999999999999 555555555554444433332 22222
Q ss_pred -hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHH
Q 018271 239 -NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFML 317 (358)
Q Consensus 239 -~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~ 317 (358)
.+....++.++...+..+..+.++.|.+|+++||+.+|+.+....+|+. +||++.|.+.|+.| |+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-lgp~l~g~l~~~~g------------~~~ 433 (496)
T PRK03893 367 WVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGA-LAPILGALIAQRLD------------LGT 433 (496)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHH-HHHHHHHHHhccCC------------hHH
Confidence 2223333333333344567788899999999999999999999999985 89999999999887 888
Q ss_pred HHHHHHHHHHHHH
Q 018271 318 SFLIMASVAFVGC 330 (358)
Q Consensus 318 ~f~~~~~~~~~~~ 330 (358)
.+...++++.+.+
T Consensus 434 ~~~~~~~~~~~~~ 446 (496)
T PRK03893 434 ALASLSFSLTFVV 446 (496)
T ss_pred HHHHHHHHHHHHH
Confidence 8766655444433
No 80
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.58 E-value=4.5e-14 Score=135.97 Aligned_cols=177 Identities=16% Similarity=0.126 Sum_probs=129.0
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
+.++.+.+.+.+.......+..+.|.+.+ .|++.++.++..+...++..++.++.|+++||+ +||..+..+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~------g~~~~~~~~~~ 99 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS------NPRVFLPAGLI 99 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc------CCceehHHHHH
Confidence 33444444433333333334556676654 699999999999999999999999999999999 55555666666
Q ss_pred HHHHHHHHHH-h----cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHH
Q 018271 224 TMSVGHIVVA-S----GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIY 298 (358)
Q Consensus 224 ~~~~~~~l~~-~----~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~ 298 (358)
+.+++.++.. . .+...+.+.+++.|++.+..++.....+.|.+|+++||++.|+.+.+..+|+. ++|++.+...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~l~~~~~ 178 (438)
T TIGR00712 100 LSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGG-IPPLLVLLGM 178 (438)
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhH-HHHHHHHHHH
Confidence 6666665544 2 12334556678888888888887888899999999999999999999999985 6777777655
Q ss_pred hhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 299 DNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 299 ~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
+...+ |+..|++.++++++..++.+++.++
T Consensus 179 ~~~~~-----------w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 179 AWFND-----------WHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHhhh-----------hHHHHHHHHHHHHHHHHHHHHhccC
Confidence 53322 9999999988888776555555443
No 81
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.58 E-value=1.4e-12 Score=123.26 Aligned_cols=172 Identities=14% Similarity=0.110 Sum_probs=126.1
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
.+.++++.++......++.........+++|.+.++.|.+...++.+.+...++..++++..|+++||+ +++..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~------~~~~~ 267 (381)
T PRK03633 194 WPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRF------GRLLV 267 (381)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc------CcHHH
Confidence 345667776655443433333334455678999998899998999999999999999999999999999 55566
Q ss_pred HHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 218 IAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
+..+..+..++...+. . ....+....+.|++.+...+...+.+.|..|+++++...+..+....+|+. +||.+.|++
T Consensus 268 l~~~~~~~~~~~~~~~-~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~-igp~~~G~l 344 (381)
T PRK03633 268 LRVQVFVVILGSIAML-S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSL-LGPSFTAML 344 (381)
T ss_pred HHHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 6656555555444332 1 223334455666666666677777788988888888888888888899995 899999999
Q ss_pred HhhccCCCCCccccccchHHHHHHHHHHHHHHH
Q 018271 298 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 298 ~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~ 330 (358)
.|+++ +++.|.+.+.+.++..
T Consensus 345 ~~~~g------------~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 345 MQNYS------------DNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHhC------------ccHHHHHHHHHHHHHH
Confidence 99987 8899988877766554
No 82
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.58 E-value=2.6e-14 Score=133.81 Aligned_cols=162 Identities=14% Similarity=0.137 Sum_probs=131.0
Q ss_pred hhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-h
Q 018271 156 GMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-S 234 (358)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~ 234 (358)
..+..+.+...+|.+.+++|++..+.++..+.+.++..++.++.|+++||+ |||+.+.++..+.+++.++.. .
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~------G~r~~~~~~~~~~~~~~~~~~~~ 88 (377)
T TIGR00890 15 TSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF------GPRAVAMLGGILYGLGFTFYAIA 88 (377)
T ss_pred HhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc------CccchhHHhHHHHHHHHHHHHHH
Confidence 333455666788999999999999999999999999999999999999999 566667777777777777666 5
Q ss_pred cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccc
Q 018271 235 GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHC 314 (358)
Q Consensus 235 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~ 314 (358)
++.+.+++.+++.|++.+..++.....+.|.++ ++|+++.++...+..+|.. +++++.+.+.+..+
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~------------ 154 (377)
T TIGR00890 89 DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSF-ILSPLITSVINLEG------------ 154 (377)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHh-HHHHHHHHHHhccc------------
Confidence 666777788889999988777777777888887 6799999999999999985 55666777777666
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 018271 315 FMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 315 ~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
|++.|++.+++.++.++..+++.
T Consensus 155 ~~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 155 VPAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhe
Confidence 99999999888877766655443
No 83
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.58 E-value=1.7e-13 Score=126.83 Aligned_cols=169 Identities=21% Similarity=0.309 Sum_probs=143.6
Q ss_pred HHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHH
Q 018271 147 WLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~ 226 (358)
+.+....++............|.+.++.|.+..+.++..+...++..++.++.|+++||+ +||+.+..+..+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~------g~r~~~~~~~~~~~ 75 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF------GRRRVLLLGLLLFA 75 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh------CCchhhHHHHHHHH
Confidence 344555666666667778888999999999999999999999999999999999999999 56667777777777
Q ss_pred HHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCC
Q 018271 227 VGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE 305 (358)
Q Consensus 227 ~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~ 305 (358)
++.++.. .++...+++.+++.|++.+...+...++..|.+|+++|++.+++.+....+|.. ++|.+.+.+.+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~--- 151 (352)
T cd06174 76 LGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGAL-LGPLLGGLLAESLG--- 151 (352)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHH-HHHHHHHHHHHHhh---
Confidence 7777666 456677888899999999999999999999999999999999999999999994 89999999999877
Q ss_pred CCccccccchHHHHHHHHHHHHHHHHHHH
Q 018271 306 GNSCNGTHCFMLSFLIMASVAFVGCLVAF 334 (358)
Q Consensus 306 ~~~~~g~~~~~~~f~~~~~~~~~~~~~~~ 334 (358)
|+..+++.+.+.+++.+...
T Consensus 152 ---------~~~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 152 ---------WRWLFLILAILGLLLALLLL 171 (352)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHH
Confidence 99999988887777765543
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.58 E-value=1.8e-13 Score=133.25 Aligned_cols=168 Identities=13% Similarity=0.165 Sum_probs=139.2
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHH-HhhhcCCchHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDI-VLHRMGWERPSFIAIT 221 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr-~~~k~~~gr~~~~~~~ 221 (358)
+.+|.+++..++-.+++|++...++.|++ ++|++.+++++..+.+.....+..+++|+++|| + |||+.+.++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~------G~r~~~~~g 87 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLL------GTKRTIVLG 87 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhcc------chHHHHHHH
Confidence 46777777778888888988888888765 679999999999999888888888999999999 7 778888888
Q ss_pred HHHHHHHHHHHH-hcCch-hHHHHHHHHHhhhhcccccHHHHHHHhhCCc--chHHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 222 LATMSVGHIVVA-SGFPG-NLYVGSIIVGVCYGCQWSLMPTITYEIFGVG--HMGTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 222 ~~~~~~~~~l~~-~~~~~-~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~--~~g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
.++..++.+++. ..+.. .+++.+++.|++.|...+...+++.|.||++ +|+.++++.+.+.++|+. +||.++|++
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~-~g~~l~g~l 166 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSL-ISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHH-HHHHHHHHH
Confidence 888888887766 33323 3456788889999999889999999999887 458899999999999995 899999999
Q ss_pred HhhccCCCCCccccccchHHHHHHHHHHHHHHH
Q 018271 298 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 298 ~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~ 330 (358)
.++.| |++.|++.++..+++.
T Consensus 167 ~~~~g------------w~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 167 ADKFG------------YSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHhhC------------hHHHHHHHHHHHHHHH
Confidence 99887 9999998765444444
No 85
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.58 E-value=1.5e-12 Score=123.31 Aligned_cols=176 Identities=15% Similarity=0.119 Sum_probs=126.6
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHH-HHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWS-IWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~-i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.++.+|++.+|......++..........+.+.+.+|.|++.++.+++..... +...+|.++.|++.||+ +++
T Consensus 201 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~------g~~ 274 (390)
T TIGR02718 201 LFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA------GLW 274 (390)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh------hHH
Confidence 56778888888777777776666666777888888999999999999888776 46678899999999999 454
Q ss_pred HHHHHHHHHHHHHHH-HHHh------cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCC-cchHHHHHHHHHHhhhHHH
Q 018271 216 SFIAITLATMSVGHI-VVAS------GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFNTIAIASPVGSY 287 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~-l~~~------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~-~~~g~~~g~~~~~~~ig~~ 287 (358)
..+..+..+..+..+ .+.. .+...++...++.+++.+..++.......+..++ +.+|+.+++.+....+|..
T Consensus 275 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~ 354 (390)
T TIGR02718 275 RTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGEL 354 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHH
Confidence 555544443322222 1111 1111222333444555666666667777777776 7899999999999999995
Q ss_pred HHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHH
Q 018271 288 VCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 331 (358)
Q Consensus 288 i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~ 331 (358)
++|.++|.++|..| |+..|+..+++.+++.+
T Consensus 355 -~g~~~~G~l~~~~G------------~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 355 -IASSIAGYLTDRFG------------YAGGFLSGTVLAVLAIL 385 (390)
T ss_pred -HHHHHHHHHHHHHc------------cHHHHHHHHHHHHHHHH
Confidence 89999999999887 99999888777666553
No 86
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.58 E-value=6.4e-14 Score=131.90 Aligned_cols=160 Identities=11% Similarity=0.192 Sum_probs=136.0
Q ss_pred hhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchh
Q 018271 161 LATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGN 239 (358)
Q Consensus 161 ~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~ 239 (358)
..+...+|.+.+++|.+..+.++..+...++..+++++.|+++||+ +||+.+..+.++.+++.+++. .++...
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~------g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 81 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF------GRKPVILGGTLVFALAAVACALAQTIDQ 81 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc------CChHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 4566788999999999999999999999999999999999999999 667777778777777777666 556667
Q ss_pred HHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHH
Q 018271 240 LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSF 319 (358)
Q Consensus 240 l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f 319 (358)
+++.+++.|++.+...+...+++.|.+++++|++..++.+.+..+|. +++|.+++.+.+..+ |++.|
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~------------~~~~~ 148 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAP-LLAPIIGGWLLVWFS------------WHAIF 148 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcC------------hHHHH
Confidence 77888999999888888888999999999999999999999999999 489999999999877 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 018271 320 LIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~ 339 (358)
++.+.+.++..++..+..++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 149 WVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHHhCCc
Confidence 98888877776555444333
No 87
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.58 E-value=1.5e-13 Score=130.79 Aligned_cols=170 Identities=14% Similarity=0.151 Sum_probs=139.0
Q ss_pred HHHHHHHHHhhhhhhhHHhcHHHHH-HhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHH
Q 018271 147 WLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 225 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~ 225 (358)
+.++...++...+.+.....++.+. +++|+|..+.++..+...+...+.+++.|+++||+ +||+.+..+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~------g~k~~l~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF------GAKPMIVTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh------CchHHHHHHHHHH
Confidence 5555666666666666777777654 57899999999999999999999999999999999 6777788888888
Q ss_pred HHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCC
Q 018271 226 SVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 304 (358)
Q Consensus 226 ~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~ 304 (358)
.++.+++. .++.+.+++.+++.|++.+...+...+++.|.+|+++|++++|+.+....+|. .+||.++|.+. ..+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~-~ig~~l~g~l~-~~g-- 162 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGA-VIGALLGSWLL-QYD-- 162 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-Hhh--
Confidence 88777766 55666777888899988877777778889999999999999999999999999 48999999998 555
Q ss_pred CCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 305 EGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 305 ~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
|++.|++.+.+.++.+++..+.
T Consensus 163 ----------~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 163 ----------FRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998887777665544333
No 88
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.58 E-value=1.3e-13 Score=134.82 Aligned_cols=161 Identities=14% Similarity=0.157 Sum_probs=135.7
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
.+..+++.+++...........+|.+.+++|.+..+.+++.+...++..++.++.|+++||+ +||+.+..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~------g~r~~~~~~~~~ 94 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY------GRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CcHHHHHHHHHH
Confidence 45556666666666666666778888899999999999999999999999999999999999 667777777777
Q ss_pred HHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC
Q 018271 225 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 303 (358)
Q Consensus 225 ~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~ 303 (358)
.+++.++.. ..+.+.+++.+++.|++.++.++....++.|.+++++|+.+.++.+.+..+|.. ++|.+.+.+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~- 172 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAV-VAAQVYSLVVPVWG- 172 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccCC-
Confidence 777777666 556677888899999999988888899999999999999999999999999994 89999999988776
Q ss_pred CCCCccccccchHHHHHHHHH
Q 018271 304 GEGNSCNGTHCFMLSFLIMAS 324 (358)
Q Consensus 304 ~~~~~~~g~~~~~~~f~~~~~ 324 (358)
|++.|++.+.
T Consensus 173 -----------w~~~f~~~~~ 182 (496)
T PRK03893 173 -----------WRALFFIGIL 182 (496)
T ss_pred -----------HHHHHHHHHH
Confidence 9999886443
No 89
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.58 E-value=1.8e-12 Score=120.06 Aligned_cols=180 Identities=17% Similarity=0.190 Sum_probs=135.7
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc-CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
..+.+|++..|...+..++...+.+...+++.+++++. |+|.+..++....+.+++.+|..+.|+++|| + .|+
T Consensus 204 ~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~-----~~~ 277 (394)
T COG2814 204 LLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-G-----PRR 277 (394)
T ss_pred HHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-c-----chh
Confidence 46788999999999999998888888888887777755 9999999999999999999999999999999 3 344
Q ss_pred HHHHHHHHHHHHHHHHHH--hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHH
Q 018271 216 SFIAITLATMSVGHIVVA--SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRI 293 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i 293 (358)
.+ .....+.++..+.+. ..+.....+..++.|+.............++ .-++.+..+.++.....++|.. .|..+
T Consensus 278 ~l-~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia-~GA~l 354 (394)
T COG2814 278 AL-IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIA-LGAAL 354 (394)
T ss_pred HH-HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHH-HHHHH
Confidence 33 334344444444333 2334444455555666665554444455555 4458889999999888888885 78889
Q ss_pred HHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 294 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 294 ~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
+|.++|+.| |....++.+.+.++++++.++..
T Consensus 355 GG~v~~~~g------------~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 355 GGLVLDALG------------YAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHhhc------------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987 99999999998888886654443
No 90
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.57 E-value=2.3e-13 Score=131.29 Aligned_cols=171 Identities=19% Similarity=0.249 Sum_probs=134.2
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 222 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~ 222 (358)
+.+|.++...+....++|++..++|.|++ ++|++..+++.+.+.+.....++.+++|+++||+. |||+.+.++.
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRil-----Grrr~iliG~ 83 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVL-----GNRMAVMLGA 83 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CcHHHHHHHH
Confidence 45677777777778888999999999876 46999999999999999999999999999999982 4555667777
Q ss_pred HHHHHHHHHHHh-c-CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCc--chHHHHHHHHHHhhhHHHHHhHHHHHHHH
Q 018271 223 ATMSVGHIVVAS-G-FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVG--HMGTIFNTIAIASPVGSYVCSVRIIGYIY 298 (358)
Q Consensus 223 ~~~~~~~~l~~~-~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~--~~g~~~g~~~~~~~ig~~i~gp~i~g~l~ 298 (358)
++.+++.+++.. . +...+++...+.+++.|...+..+++++|.||++ +|.+++++.+.+.++|+. ++|++.|++.
T Consensus 84 il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~-iap~l~g~L~ 162 (493)
T PRK15462 84 LLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSI-IAPIACGYAQ 162 (493)
T ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHH-HHHHHHHHHH
Confidence 777777666552 2 2233444444555666666677788999999986 699999999999999995 8999999999
Q ss_pred hhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 299 DNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 299 ~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
+..| |++.|.+.++.++++.+.
T Consensus 163 ~~~G------------w~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 163 EEYS------------WAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred hhhC------------hHHHHHHHHHHHHHHHHH
Confidence 8887 999999877766555543
No 91
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.57 E-value=1.8e-13 Score=130.66 Aligned_cols=185 Identities=17% Similarity=0.183 Sum_probs=133.2
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
...+.+|+++.|.+.+.+++..+.+.++..++|++.++ .++.........+..+...++++++|+++||+ +++
T Consensus 244 ~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRi------G~~ 316 (462)
T PRK15034 244 DQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKF------GGV 316 (462)
T ss_pred HHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhc------Cch
Confidence 35678999999999999999998988899999999876 45544444445566788899999999999999 454
Q ss_pred HHHHHHHHHHHHHHHH-H-Hhc-----CchhHHHHHHHHHhhhhcccccHHHHHHHhhCC--------------------
Q 018271 216 SFIAITLATMSVGHIV-V-ASG-----FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV-------------------- 268 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l-~-~~~-----~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~-------------------- 268 (358)
+++.++++.+.+.... + ..+ +...+.+..+...++.|...+....+++++||.
T Consensus 317 ~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~ 396 (462)
T PRK15034 317 RVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREA 396 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHH
Confidence 5555555544443322 1 122 112223333333344444445556666777764
Q ss_pred -cchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 269 -GHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 269 -~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
++.|...|+.+..+.+|++ +-|.+.|...+.+|+ |...|+...+..+++.++.++.+.|
T Consensus 397 ~~~~g~v~G~v~a~G~~Ggf-~~p~~~g~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 397 VTETAAALGFISAIGAVGGF-FIPQAFGMSLNMTGS-----------PVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred HHHHHHHHHHHHHHHHcccc-hhhHHHHHHHHHcCC-----------cHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1578999999999999996 668899999999987 9999999999999998888776654
No 92
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.57 E-value=1.5e-13 Score=132.93 Aligned_cols=158 Identities=16% Similarity=0.123 Sum_probs=120.4
Q ss_pred HHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHh-c----Cc
Q 018271 163 TVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-G----FP 237 (358)
Q Consensus 163 ~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~-~----~~ 237 (358)
+...+|++.++ |++..+.++..+...++..++.++.|+++||+ +||+++.++.++.++..+++.. . +.
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~------g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~ 120 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS------NPRVFLPAGLILAAAVMLFMGFVPWATSSI 120 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc------CCchhHHHHHHHHHHHHHHHHhhhcccccH
Confidence 34567777766 99999999999999999999999999999999 6666777777777776665542 1 33
Q ss_pred hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHH
Q 018271 238 GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFML 317 (358)
Q Consensus 238 ~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~ 317 (358)
..+++.+++.|++.+..++.....+.|.+|+++|++++|+.+.+..+|+.+.+|++...+....+ |++
T Consensus 121 ~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g------------w~~ 188 (452)
T PRK11273 121 AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND------------WHA 188 (452)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc------------HHH
Confidence 45666778889888877777778889999999999999999999988874455554333333334 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 018271 318 SFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 318 ~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
.|++.+++.++..++.+++.++
T Consensus 189 ~f~i~~~~~~~~~~l~~~~~~~ 210 (452)
T PRK11273 189 ALYMPAFAAILVALFAFAMMRD 210 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHccC
Confidence 9999888777766555555443
No 93
>TIGR00895 2A0115 benzoate transport.
Probab=99.57 E-value=9.5e-14 Score=131.03 Aligned_cols=147 Identities=14% Similarity=0.071 Sum_probs=113.8
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
+..+.+++..++.....+....++|.+.++.|++..+++.+.+...++..+++++.|+++||+ +|+........
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~ 323 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL------GPRVTALLLLL 323 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------chHHHHHHHHH
Confidence 445555556666666667778889988888999999999999999999999999999999999 55533333333
Q ss_pred HHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 224 TMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 224 ~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
......++.. ..+....++..++.|++.+...+...+++.|.+|++.||+++|+.+....+|.. +||.+.|++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~g~~~~G~l 397 (398)
T TIGR00895 324 GAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAI-IGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH-HHHHhHHhc
Confidence 3322222222 344455667778889998888888999999999999999999999999999995 899999875
No 94
>PRK11043 putative transporter; Provisional
Probab=99.56 E-value=2.1e-13 Score=129.59 Aligned_cols=160 Identities=14% Similarity=0.150 Sum_probs=129.3
Q ss_pred hhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcC
Q 018271 158 GSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGF 236 (358)
Q Consensus 158 ~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~ 236 (358)
.....+...+|.+.+++|.+.++.++..++..++..++.+++|+++||+ +||+.+..+..+..++.++.. ..+
T Consensus 20 ~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~------g~r~~~~~~~~~~~~~~~~~~~~~~ 93 (401)
T PRK11043 20 LATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY------GRKPVLLAGLSLFALGSLGMLWVES 93 (401)
T ss_pred HHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc------CCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 3334455566677889999999999999999999999999999999999 666667777766666666555 456
Q ss_pred chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchH
Q 018271 237 PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFM 316 (358)
Q Consensus 237 ~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~ 316 (358)
.+.+++.+++.|++.+........++.|.+++++++...+..+....++.. ++|.+.|++.+..+ |+
T Consensus 94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~i~~~l~~~~g------------~~ 160 (401)
T PRK11043 94 AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPA-LAPLLGAWLLNHFG------------WQ 160 (401)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCC------------hH
Confidence 667777888888887776666778899999999999999998888888884 89999999999887 99
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 018271 317 LSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 317 ~~f~~~~~~~~~~~~~~~~~ 336 (358)
..|++.+++.++..++.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 161 AIFATLFAITLLLILPTLRL 180 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999888777776554443
No 95
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.56 E-value=5.4e-12 Score=119.88 Aligned_cols=173 Identities=10% Similarity=0.119 Sum_probs=122.8
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcH-HHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNI-SQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
++.++++.+|...+..++.....+....++ |.+.++.|++..+.+.......+++.+|+++.|++.||. +++.
T Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~------~~~~ 283 (394)
T PRK10213 210 FRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS------VKLA 283 (394)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc------chhH
Confidence 456788888887666655555555555665 667778899998889999999999999999999999985 4443
Q ss_pred HHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHH
Q 018271 217 FIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 295 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g 295 (358)
.+...........++.. ..+.+.+.+..++.|++.+...+.....+.+..| ++.+...++......+|. .+||.++|
T Consensus 284 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~-~~G~~l~G 361 (394)
T PRK10213 284 LAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLAN-TCGAAIGG 361 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 33333333333333322 3444556667788888888777777777887776 556677777777777888 48999999
Q ss_pred HHHhhccCCCCCccccccchHHHHHHHHHHHHHHH
Q 018271 296 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 296 ~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~ 330 (358)
.++|..| +...++..+.+.++..
T Consensus 362 ~l~~~~g------------~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 362 YALDNIG------------LTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHhccC------------hhhHHHHHHHHHHHHH
Confidence 9999887 7777777666554444
No 96
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.55 E-value=2.6e-12 Score=121.51 Aligned_cols=177 Identities=16% Similarity=0.122 Sum_probs=116.6
Q ss_pred hhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH
Q 018271 140 SVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 218 (358)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~ 218 (358)
.++++.+|......++.....+.+.++++.+.+ ..|++..+.+++.+...+++.+++++.|+++||+ +++..+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~------~~~~~~ 268 (382)
T PRK10091 195 FLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY------SPLRIA 268 (382)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc------CchhHH
Confidence 456777777666555554444444555565555 5799999999999999999999999999999999 555555
Q ss_pred HHHHHHHHHHHHHHH--hcCchhHHHHHHHHHhhhhcccccHH-HHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHH
Q 018271 219 AITLATMSVGHIVVA--SGFPGNLYVGSIIVGVCYGCQWSLMP-TITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 295 (358)
Q Consensus 219 ~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~g~~~g~~~~~~~-~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g 295 (358)
..+..+..++.+++. .++.....+..++.+++.++..+... ....+..+.+.++.+. .+....+|.. +||.+.|
T Consensus 269 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~-~Gp~~~G 345 (382)
T PRK10091 269 AVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSA-IGAYCGG 345 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHH-HHHHHhH
Confidence 556555555554433 23333334444455555444333323 3344444555555543 3566778884 8999999
Q ss_pred HHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 296 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 296 ~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
.+.|.+++ |+..+.+.++++++.......+
T Consensus 346 ~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 346 MMLTLGLA-----------YNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHcccC-----------cchHHHHHHHHHHHHHHHHHHH
Confidence 99997655 9999998887777766554443
No 97
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.55 E-value=3.5e-12 Score=121.10 Aligned_cols=159 Identities=9% Similarity=0.044 Sum_probs=114.5
Q ss_pred hhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-
Q 018271 156 GMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA- 233 (358)
Q Consensus 156 ~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~- 233 (358)
.......+..++|.+.+ ++|++..+++.+.+...+...++.++.|+++||+ +||+.+..+.....+......
T Consensus 228 ~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~------g~~~~~~~~~~~~~~~~~~~~~ 301 (393)
T PRK15011 228 MWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL------GKRFLMRVAAVAGVCFYAGMLM 301 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------ChHHHHHHHHHHHHHHHHHHHH
Confidence 33344456678888775 5699988888888887788889999999999999 444444444433333333222
Q ss_pred hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCcccccc
Q 018271 234 SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTH 313 (358)
Q Consensus 234 ~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~ 313 (358)
..+.+.+++..++.+++.+...+..+.+..|.+|+ ++|++.++.+....+|.. ++|.++|.+.|..+
T Consensus 302 ~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~-~g~~l~G~i~~~~g----------- 368 (393)
T PRK15011 302 AHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWI-IAGSLAGIVAEIWN----------- 368 (393)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHH-HHHHHHHHHHHHhh-----------
Confidence 33444445555556666665556667778898885 589999999888899984 89999999999877
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q 018271 314 CFMLSFLIMASVAFVGCLVAF 334 (358)
Q Consensus 314 ~~~~~f~~~~~~~~~~~~~~~ 334 (358)
|+..|++.+++.+++.+..+
T Consensus 369 -~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 369 -YHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred -hHHHHHHHHHHHHHHHHHHH
Confidence 99999888877777665543
No 98
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.55 E-value=1.4e-13 Score=130.56 Aligned_cols=165 Identities=11% Similarity=0.040 Sum_probs=133.4
Q ss_pred chhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHH
Q 018271 143 TLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 222 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~ 222 (358)
++.++.++++.++...........++.+.+++|.+..+.+++.+.+.+...++.++.|+++||+ +||+++..+.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~------grr~vl~~~~ 75 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF------PKGRVMFIAN 75 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc------CCchhhHHHH
Confidence 4577888888888777666666667777889999988999999999999999999999999999 6666777777
Q ss_pred HHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhc
Q 018271 223 ATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 301 (358)
Q Consensus 223 ~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~ 301 (358)
.+..++.+++. ..+ .++.+++.|++.+...+...++++|++|+++|+++.|+.+....+|. ++||.++|.+.+..
T Consensus 76 ~~~~~~~~~~~~~~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~-~~Gp~lgG~l~~~~ 151 (393)
T PRK11195 76 GIKLLGCLLMLFGIH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAI-LLGTVLGGALADPH 151 (393)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 76666555443 222 25677889999999999999999999999999999999999999898 58999999998852
Q ss_pred cCCCCCccccccchHHHHHHHHHHHHHHH
Q 018271 302 ASGEGNSCNGTHCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 302 g~~~~~~~~g~~~~~~~f~~~~~~~~~~~ 330 (358)
|+..+.+.+.+.+++.
T Consensus 152 -------------~~~~~~i~~~~~~~~~ 167 (393)
T PRK11195 152 -------------AEAALAVCALIYLLAA 167 (393)
T ss_pred -------------HHHHHHHHHHHHHHHH
Confidence 7777776665555444
No 99
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.55 E-value=6.5e-12 Score=115.29 Aligned_cols=165 Identities=13% Similarity=0.117 Sum_probs=126.1
Q ss_pred HhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh---cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 139 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES---LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
+.++++.+++..+..++..+...++..|++.|+++ +|++.++++...+.+..+..+||++.++++||+ +++
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~------g~~ 208 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI------SQG 208 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CHH
Confidence 35667888888888888888888999999999974 489999999999999999999999999999999 444
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHH
Q 018271 216 SFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 295 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g 295 (358)
+.+.++..+.++..++....+........++.|++.+..++...+...+.+|++ .+++.++. ..+.+|+. +.|++.|
T Consensus 209 ~~l~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~-i~P~l~G 285 (310)
T TIGR01272 209 RYLAFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGA-IVPLLQG 285 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcch-HHHHHHH
Confidence 455556555555554444322233334566888999999998888888888753 45666665 45667885 7899999
Q ss_pred HHHhhccCCCCCccccccchHHHHHHHHH
Q 018271 296 YIYDNVASGEGNSCNGTHCFMLSFLIMAS 324 (358)
Q Consensus 296 ~l~~~~g~~~~~~~~g~~~~~~~f~~~~~ 324 (358)
.+.|..| .+.+|++...
T Consensus 286 ~lad~~g------------~~~a~~v~~~ 302 (310)
T TIGR01272 286 SLADCLG------------IQLAFALPVP 302 (310)
T ss_pred HHHHhcc------------chHHHHHHHH
Confidence 9999887 7788774443
No 100
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.55 E-value=2.7e-12 Score=121.41 Aligned_cols=174 Identities=14% Similarity=0.020 Sum_probs=132.3
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
+.++.+|++.+|.+.+..++.......+.+.+|.+.++.|++..+.+.+.++..++..++.++.|++.||+ +++
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~------~~~ 270 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW------SAR 270 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC------CHH
Confidence 45788899999988777776666666667778888888999998899998888889999999999999998 666
Q ss_pred HHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHH-HHhhhHHHHHhHHH
Q 018271 216 SFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA-IASPVGSYVCSVRI 293 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~-~~~~ig~~i~gp~i 293 (358)
..+..+.+..++..+++. .++++.+++..++.|++.+...+....+..+. +++++++..++.+ ....+|. .+||.+
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~-~ig~~i 348 (382)
T PRK11128 271 DLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSI-AIMTVL 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHH-HHHHHH
Confidence 667777777776666555 45556667778888888877666667777776 5566788888886 5556666 479999
Q ss_pred HHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHH
Q 018271 294 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 294 ~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~ 330 (358)
+|.++|..| + ..|+..+++.+++.
T Consensus 349 ~G~l~~~~g------------~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 349 SGFLYQHLG------------A-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHhcc------------H-HHHHHHHHHHHHHH
Confidence 999999887 5 46666666555443
No 101
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.55 E-value=1.9e-13 Score=130.15 Aligned_cols=170 Identities=14% Similarity=0.087 Sum_probs=127.7
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
.++..+++.++..........+++.+.+++|.+.++.++..+.+.++..++.++.|+++||+ +||+.+..+..+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~------g~k~~l~~~~~~ 87 (402)
T TIGR00897 14 NLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEII------GPLKTMMIGLLL 87 (402)
T ss_pred hhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc------CcHHHHHHHHHH
Confidence 44555556655555555566678888899999999999999999999999999999999999 666777777777
Q ss_pred HHHHHHHH---Hh--cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHh
Q 018271 225 MSVGHIVV---AS--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 299 (358)
Q Consensus 225 ~~~~~~l~---~~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~ 299 (358)
.+++.+++ .. .+...+++.+++.|++.+.........+.+.+|+++|+++.|+.+.+..+|..+++|++++++.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~ 167 (402)
T TIGR00897 88 WCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP 167 (402)
T ss_pred HHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 66665433 21 34455667788888887766666667788999999999999999999998863478999999888
Q ss_pred hccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 300 NVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 300 ~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
..| |+..++....+..++.++
T Consensus 168 ~~g------------~~~~~~~~~~~~~~~~~~ 188 (402)
T TIGR00897 168 AFG------------EMNTLWSALAFVLTGGVI 188 (402)
T ss_pred ccc------------hHHHHHHHHHHHHHHHHH
Confidence 776 655555544443443333
No 102
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.55 E-value=1.5e-12 Score=123.57 Aligned_cols=180 Identities=13% Similarity=0.125 Sum_probs=134.0
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc----CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcC
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL----GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 211 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~ 211 (358)
+..+.+|++.+|.+.+..++..........+.+.+.++. +.+....+.+.++..+...++.+..|++.||+
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~----- 281 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI----- 281 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 356788899888776665555544445556777777654 45556678888888888999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHH-HHHHhhhHHHHH
Q 018271 212 WERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNT-IAIASPVGSYVC 289 (358)
Q Consensus 212 ~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~-~~~~~~ig~~i~ 289 (358)
+||..+.++..+.++...+.. ..+.+.+++..++.|++..........+..+.++++.+++..+. .+....+|+. +
T Consensus 282 -g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~-~ 359 (396)
T TIGR00882 282 -GAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMI-F 359 (396)
T ss_pred -ccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHH-H
Confidence 555566666666666665544 45566666677778877665555555677788888888887776 5678889984 8
Q ss_pred hHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHH
Q 018271 290 SVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 334 (358)
Q Consensus 290 gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~ 334 (358)
+|++.|++.|..| |+..|++.+++.++..++..
T Consensus 360 ~~~l~G~l~~~~G------------~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 360 LSTLAGNMYDSIG------------FQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHhHHHHHHhcc------------cHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887 99999999988887776553
No 103
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.54 E-value=2.4e-15 Score=139.09 Aligned_cols=178 Identities=15% Similarity=0.167 Sum_probs=150.0
Q ss_pred HHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHH
Q 018271 147 WLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~ 226 (358)
.++.+...+...--+.+...++...+.+|.+.+..+++.+.+.+...+..|++|+++||+ .|+.++.++..+..
T Consensus 36 ~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry------NR~~v~~vG~~iW~ 109 (493)
T KOG1330|consen 36 VILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY------NRKRVIAVGIFIWT 109 (493)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc------CcceEEeeHHHHHH
Confidence 334444455555555566666667777899999999999999999999999999999999 77788999999998
Q ss_pred HHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCC
Q 018271 227 VGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE 305 (358)
Q Consensus 227 ~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~ 305 (358)
++.++.. ....+.+.+++.+.|+|.+...++.+.+++|.|+..+|++.+++.+.+..+|+. +|-++++.+.+..+.
T Consensus 110 ~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsg-lG~vvgs~va~~~~~-- 186 (493)
T KOG1330|consen 110 LAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSG-LGYVVGSVVASLTFW-- 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccc-eeEEeeeeeccCccc--
Confidence 8888877 556778889999999999999999999999999999999999999999999995 776667777777665
Q ss_pred CCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 018271 306 GNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRR 342 (358)
Q Consensus 306 ~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 342 (358)
||++|+..+++.++.+++..++.++..+
T Consensus 187 ---------Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 187 ---------WRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred ---------eEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 9999999999999999888777666554
No 104
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.54 E-value=9.2e-13 Score=125.85 Aligned_cols=187 Identities=11% Similarity=0.127 Sum_probs=130.9
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 222 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~ 222 (358)
+.+++.++.+++.....+.+....+.+.+ ++|+|.++.+++.++..++..++++..|++.||+ |.|+++.++.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~------G~R~v~~~~~ 107 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF------GGRRWTVFST 107 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CChHHHHHHH
Confidence 56777777766666666666666677766 7999999999999999999999999999999999 4455566666
Q ss_pred HHHHHHHHHHH-h-----cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHH---HHhHHH
Q 018271 223 ATMSVGHIVVA-S-----GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSY---VCSVRI 293 (358)
Q Consensus 223 ~~~~~~~~l~~-~-----~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~---i~gp~i 293 (358)
++..+..++.. . +++..+++.+++.|++ ++.++.....+++.||+++||++.|+....+.+|.. ++.|.+
T Consensus 108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 66666666655 2 4667788899999997 667888888999999999999999999544444442 233443
Q ss_pred HH-HHHhhccCCCCCccc-cccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 294 IG-YIYDNVASGEGNSCN-GTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 294 ~g-~l~~~~g~~~~~~~~-g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
.+ .+.+..|......-. +..+|+.+.++...+.++..++.+++.
T Consensus 187 i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~ 232 (462)
T PRK15034 187 IFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGM 232 (462)
T ss_pred HHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 233433321100000 133477787777777777766655543
No 105
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.54 E-value=2.8e-13 Score=131.10 Aligned_cols=155 Identities=15% Similarity=0.144 Sum_probs=124.5
Q ss_pred hHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhH
Q 018271 162 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNL 240 (358)
Q Consensus 162 ~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l 240 (358)
.+..++|.+.+++|.+.++.++..+.+.++..++.++.|+++||+ +||..+..+.++..++.+++. .++.+.+
T Consensus 37 ~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~------g~r~~l~~~~~~~~~~~~~~~~~~~~~~l 110 (455)
T TIGR00892 37 AVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF------GCRPVVIAGGLLASLGMILASFSSNVIEL 110 (455)
T ss_pred chhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc------CchHHHHhhHHHHHHHHHHHHHhhhHHHH
Confidence 345568888899999999999999999999999999999999999 666677777777777666665 4555555
Q ss_pred HH-HHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHH
Q 018271 241 YV-GSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSF 319 (358)
Q Consensus 241 ~~-~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f 319 (358)
++ .+++.|++.+..+.....++.+.++ ++|+++.|+.+.+..+|.. ++|++.|.+.+..| |+++|
T Consensus 111 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~-~~~~l~~~l~~~~g------------wr~~f 176 (455)
T TIGR00892 111 YLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLS-TLAPLNQYLFESFG------------WRGSF 176 (455)
T ss_pred HHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHH-HHHHHHHHHHHHhC------------hHHHH
Confidence 44 3477788887665666678889886 7899999999999999985 78999999999887 99999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018271 320 LIMASVAFVGCLVAFLL 336 (358)
Q Consensus 320 ~~~~~~~~~~~~~~~~~ 336 (358)
++.+++.+++.+..+++
T Consensus 177 ~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 177 LILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99998887766544433
No 106
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.54 E-value=9.3e-14 Score=134.90 Aligned_cols=159 Identities=11% Similarity=0.040 Sum_probs=124.4
Q ss_pred hHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH------hc
Q 018271 162 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA------SG 235 (358)
Q Consensus 162 ~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~------~~ 235 (358)
.+....|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+ +||+++..+.++.++..++++ .+
T Consensus 47 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~ 120 (467)
T PRK09556 47 NFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK------NTKQFLPFLLILSAICMLGFGASLGSGSV 120 (467)
T ss_pred ChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc------CccchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 345568889999999999999999999999999999999999999 555666666555555444332 24
Q ss_pred CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccch
Q 018271 236 FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCF 315 (358)
Q Consensus 236 ~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~ 315 (358)
+...+++.+++.|++.+..++....+++|.+|+++||+++|+.+.+..+|+. +++++..++.+.... .+|
T Consensus 121 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~-l~~~i~~~~~~~~~~---------~~~ 190 (467)
T PRK09556 121 SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGA-GAGGVALWGANYFFD---------GHV 190 (467)
T ss_pred hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhh-HHHHHHHHHHHhhcc---------Ccc
Confidence 5667888899999999988888889999999999999999999999999995 778777776664310 018
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 018271 316 MLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 316 ~~~f~~~~~~~~~~~~~~~~~ 336 (358)
+..|.+.+++.++.+++.+++
T Consensus 191 ~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 191 IGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHHh
Confidence 888888777766655554444
No 107
>PRK12382 putative transporter; Provisional
Probab=99.54 E-value=3.4e-12 Score=120.99 Aligned_cols=154 Identities=16% Similarity=0.101 Sum_probs=118.3
Q ss_pred hhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchh
Q 018271 161 LATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGN 239 (358)
Q Consensus 161 ~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~ 239 (358)
.....+.|.+.++.|++. .+...+...++..+++++.|++.||++ +++.+..+..+.+++.+++. ..+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (392)
T PRK12382 233 AVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFG------GVKVAIVSLLVETVGLLLLWLAPTAWV 304 (392)
T ss_pred hHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcC------CCeehHHHHHHHHHHHHHHHHcccHHH
Confidence 345567778888877763 455666777888999999999999995 33445555555555555544 344445
Q ss_pred HHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHH
Q 018271 240 LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSF 319 (358)
Q Consensus 240 l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f 319 (358)
.++..++.|++.+...+.......|.+|+++||+++|+.+....+|.. ++|++.|.+.|+.| |+..|
T Consensus 305 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-ig~~~~g~l~~~~g------------~~~~~ 371 (392)
T PRK12382 305 ALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYG-VSGPLAGMLATSFG------------YPSVF 371 (392)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhC------------chHHH
Confidence 556677888888777777778888999999999999999999999985 89999999999987 99999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018271 320 LIMASVAFVGCLVAFL 335 (358)
Q Consensus 320 ~~~~~~~~~~~~~~~~ 335 (358)
++.+++.+++.++.+.
T Consensus 372 ~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 372 LAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999888877765443
No 108
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.54 E-value=3.2e-12 Score=118.22 Aligned_cols=171 Identities=20% Similarity=0.277 Sum_probs=144.9
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc-CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH-HHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS-FIAIT 221 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~-~~~~~ 221 (358)
+.+|...+..++.......+..+.|.+.++. |.+..+.+...+...++..+++++.|+++||+ +||. .+..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------~~~~~~~~~~ 248 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL------GRRRLLLLIG 248 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhhhHHHHHH
Confidence 4566677777777777778888999998876 99999999999999999999999999999999 5555 67777
Q ss_pred HHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhh
Q 018271 222 LATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN 300 (358)
Q Consensus 222 ~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~ 300 (358)
..+..++.+.+. ..+....++..++.|++.+...+....++.|.+|+++|++.+|+.+....+|.. ++|.+.|.+.|.
T Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~i~g~l~~~ 327 (352)
T cd06174 249 LLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGA-LGPLLAGLLLDT 327 (352)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcc
Confidence 777777766665 444566777888999999999999999999999999999999999999999995 899999999987
Q ss_pred ccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 301 VASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 301 ~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
.+ |+..+++.+++.+++.+..
T Consensus 328 ~~------------~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 328 GG------------YGGVFLILAALALLAALLL 348 (352)
T ss_pred cC------------cchHHHHHHHHHHHHHHHh
Confidence 76 9999999998888877554
No 109
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.54 E-value=6e-13 Score=126.36 Aligned_cols=150 Identities=17% Similarity=0.159 Sum_probs=129.4
Q ss_pred hhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchh
Q 018271 161 LATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGN 239 (358)
Q Consensus 161 ~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~ 239 (358)
+.....+|.+.+++|+|..+.++..+.+.++..++.++.|+++||+ |||+++..+..+.+++.++.+ .++...
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~------G~r~~l~~~~~l~~~~~~~~~~a~~~~~ 99 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV------SERRSVAISLLLIAVGALMRELYPQSAL 99 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh------CchHHHHHHHHHHHHHHHHHHHCcchHH
Confidence 4456678899999999999999999999999999999999999999 788889999999999988887 667778
Q ss_pred HHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHH
Q 018271 240 LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSF 319 (358)
Q Consensus 240 l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f 319 (358)
+++.+++.|++.+...+....++.+.++ ++|+.++|+...+..+|.. +++.+.+++.++... |+..+
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~-~g~~~~~~l~~~~~~-----------w~~~~ 166 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGG-LGAAITPWLVQHSET-----------WYQTL 166 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHH-HHHHHHHHHHHhcCC-----------HHHHH
Confidence 8889999999999888888889999997 7899999999988888884 788889988887633 99988
Q ss_pred HHHHHHHHHH
Q 018271 320 LIMASVAFVG 329 (358)
Q Consensus 320 ~~~~~~~~~~ 329 (358)
.+.++..++.
T Consensus 167 ~~~~~~~~~~ 176 (393)
T PRK09705 167 AWWALPAVVA 176 (393)
T ss_pred HHHHHHHHHH
Confidence 7766554443
No 110
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.53 E-value=1.4e-13 Score=131.65 Aligned_cols=178 Identities=16% Similarity=0.090 Sum_probs=137.7
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.+...+++.++.++...++...........+|.+.++.+.+..+.++..+...++..++.++.|+++||++| |+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~------~~ 83 (417)
T PRK10489 10 LSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDR------KK 83 (417)
T ss_pred HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCC------ce
Confidence 344556788887777777777766677778899999998899999999999999999999999999999954 44
Q ss_pred HHHHHHHHHHHHHHHHH------hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHh
Q 018271 217 FIAITLATMSVGHIVVA------SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 290 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~------~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~g 290 (358)
.+..+..+.+++.+.+. .++...+++.+++.|++.+...+...++++|.+|+++|+++.++.+....+|. ++|
T Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g 162 (417)
T PRK10489 84 LILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGS-VIS 162 (417)
T ss_pred EEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHH-HhH
Confidence 44444444443333221 23345566777888888777677778889999999999999999999999998 489
Q ss_pred HHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 291 VRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 291 p~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
|.++|.+.+..+ |++.|++.++..+++.++.
T Consensus 163 ~~l~g~l~~~~~------------~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 163 PALGGLLIAAGG------------VAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHHHHHHHHh------------hHHHHHHHHHHHHHHHHHH
Confidence 999999998877 9999988777666655443
No 111
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.53 E-value=3.1e-13 Score=121.56 Aligned_cols=137 Identities=13% Similarity=0.121 Sum_probs=104.4
Q ss_pred HHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHH
Q 018271 186 SLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYE 264 (358)
Q Consensus 186 ~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e 264 (358)
...++..+.|.++.+++.||+ |||..+...+++++++.+++. ..+.....+..+..-++..+.+...+.|.+|
T Consensus 388 litslaefPGlLIt~~iverl------GRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPE 461 (528)
T KOG0253|consen 388 LITSLAEFPGLLITGVIVERL------GRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPE 461 (528)
T ss_pred HHHHHhhCCchhHHHHHHHHh------cchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCc
Confidence 455677888999999999999 777889989999888887766 4455555555555556667778888999999
Q ss_pred hhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 018271 265 IFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRF 343 (358)
Q Consensus 265 ~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 343 (358)
.||+..|+++.|.....+++|+ ++.|+++ ...+.. -..+..+.+++++++.+++.++..|+|.+
T Consensus 462 VyPTavRatgvGtcSsmaRIgg-I~~p~iA-~~~e~s-------------~sl~i~vy~~~~ilagIavcffPiEtkGR 525 (528)
T KOG0253|consen 462 VYPTAVRATGVGTCSSMARIGG-IFSPVIA-MRAELS-------------TSLPIFVYGALFILAGIAVCFFPIETKGR 525 (528)
T ss_pred ccchhhhhcchhhhhhHHhhhh-hhhhHHH-HHhccc-------------eeehHHHHHHHHHHHHHHheeeeeccCCC
Confidence 9999999999999999999999 5899888 333322 23444556667777777777776677654
No 112
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.52 E-value=8.4e-12 Score=119.91 Aligned_cols=159 Identities=12% Similarity=0.028 Sum_probs=117.7
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc-CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
..++.++++.++.+.+..++..........+.+++.+.. | +....+.+.++..++.+++.+++++++||+ ++
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~------g~ 286 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF------GR 286 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh------Cc
Confidence 356778899998887777776666655555556665533 4 455666777788899999999999999999 55
Q ss_pred HHHHHHHHHHHHHHHHHHHh--cCchhHHHHHHHHHhhhhcccccHHHHHHHhhC-------CcchHHHHHHHHHHhhhH
Q 018271 215 PSFIAITLATMSVGHIVVAS--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFG-------VGHMGTIFNTIAIASPVG 285 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-------~~~~g~~~g~~~~~~~ig 285 (358)
+..+..+..+.+++.+++.. .+...+++..++.|++.+..++..+++++|..+ ++.+|+.+|+.+....+|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g 366 (437)
T TIGR00792 287 KILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLG 366 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHH
Confidence 56666666666665555442 233344556677788888888888888888754 556899999999999999
Q ss_pred HHHHhHHHHHHHHhhcc
Q 018271 286 SYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 286 ~~i~gp~i~g~l~~~~g 302 (358)
.. +++.+.|.+.+..|
T Consensus 367 ~~-lg~~i~g~ll~~~G 382 (437)
T TIGR00792 367 QA-LAGFLVGLILGIIG 382 (437)
T ss_pred HH-HHHHHHHHHHHHcC
Confidence 95 89999999998765
No 113
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.51 E-value=6.1e-13 Score=127.69 Aligned_cols=194 Identities=16% Similarity=0.192 Sum_probs=142.8
Q ss_pred ccccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhc-
Q 018271 133 EDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRM- 210 (358)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~- 210 (358)
...+++++++++.+|.++++.++.....+.+..++|+|+++ +|++..+.+++.++..+.+.+..+++|.++||.-+|.
T Consensus 247 ~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~l 326 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRIL 326 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 35578999999999999999999999999999999999986 5999999999999999999999999999999986641
Q ss_pred --CCchHHHHHHHHHHHHHHHHHHH-hcC-chhHHHHHHHHHhhhhccc-ccHHHHHHHhhCCcchHHHHHHHHHHhhhH
Q 018271 211 --GWERPSFIAITLATMSVGHIVVA-SGF-PGNLYVGSIIVGVCYGCQW-SLMPTITYEIFGVGHMGTIFNTIAIASPVG 285 (358)
Q Consensus 211 --~~gr~~~~~~~~~~~~~~~~l~~-~~~-~~~l~~~~~l~g~~~g~~~-~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig 285 (358)
...||..-.+++...+++++.+. ... .....+.++..+.+..+.. +-.+....+. .++.-+..+|+.+....++
T Consensus 327 s~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~ 405 (466)
T KOG2532|consen 327 SETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALA 405 (466)
T ss_pred chHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHH
Confidence 11456666777777777777666 222 2222222222222222222 2222222222 5578899999999999999
Q ss_pred HHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 286 SYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 286 ~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
++ ++|.+.|.+.. .++ .+.|+..|++.+++.+++.+...++.
T Consensus 406 ~~-~~P~~vg~~~~-~~t--------~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 406 GF-IAPLLVGIIVT-DNT--------REEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HH-HHHHheeeEeC-CCC--------HHHHHHHHHHHHHHHHHhchheeEee
Confidence 95 89999999884 211 12399999999999999886654443
No 114
>PRK12382 putative transporter; Provisional
Probab=99.51 E-value=5.2e-13 Score=126.56 Aligned_cols=163 Identities=13% Similarity=0.061 Sum_probs=125.6
Q ss_pred chhHHHHHHHHHHhhhhhhhHHhcHHHHH-HhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHH
Q 018271 143 TLNFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 221 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~ 221 (358)
++.++.+++..++...........+|.+. +++|.|..+.++..+...++..+++++.|+++||+ +||+.+..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~------g~r~~l~~~ 87 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY------GAKRSALQG 87 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh------cchHHHHHH
Confidence 45666666666666655566667788654 67899999999999999999999999999999999 666666666
Q ss_pred HHHHHHHHHHH---H-h-----cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 222 LATMSVGHIVV---A-S-----GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 222 ~~~~~~~~~l~---~-~-----~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
.+...++.+.+ . . .+...+++.+++.|++.+...+...+++.|.+|+++|++++|+.+.+..+|. .++|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~-~~g~~ 166 (392)
T PRK12382 88 MLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGAL-AAGAP 166 (392)
T ss_pred HHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHH-HHHHH
Confidence 55544433221 1 1 2334567788999998887777777888999999999999999998888888 48999
Q ss_pred HHHHHHhhccCCCCCccccccchHHHHHHHHH
Q 018271 293 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMAS 324 (358)
Q Consensus 293 i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~ 324 (358)
+++.+.+..| |+..+.+...
T Consensus 167 ~~~~l~~~~g------------~~~~~~~~~~ 186 (392)
T PRK12382 167 LGLLLHSHFG------------FAALALTTMV 186 (392)
T ss_pred HHHHHHhccC------------hHHHHHHHHH
Confidence 9999988777 8877665443
No 115
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.49 E-value=1e-12 Score=127.77 Aligned_cols=148 Identities=18% Similarity=0.092 Sum_probs=113.1
Q ss_pred CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhc----------C---chhHH
Q 018271 175 GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASG----------F---PGNLY 241 (358)
Q Consensus 175 G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~----------~---~~~l~ 241 (358)
|.+..+.++..+.+.++..++.+++|+++||+ |||+.+.++.++.+++.++.+.. + ...++
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~------Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRF------GRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFV 124 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh------ccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHH
Confidence 88888999999999999999999999999999 77777777777776665544321 1 23466
Q ss_pred HHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHH
Q 018271 242 VGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLI 321 (358)
Q Consensus 242 ~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~ 321 (358)
+.+++.|++.|+..+...++++|++|+++||..+|+.+.+..+|.. +++.+.+.+....+. .. ....+||+.|++
T Consensus 125 ~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~---~~-~~~~gWr~~f~~ 199 (479)
T PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL-VVYFVNYFIARSGDA---SW-LNTDGWRYMFAS 199 (479)
T ss_pred HHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhccCcc---cc-cccCChHHHHHH
Confidence 8899999999999999999999999999999999999999899984 666655554321110 00 012239999998
Q ss_pred HHHHHHHHHHHH
Q 018271 322 MASVAFVGCLVA 333 (358)
Q Consensus 322 ~~~~~~~~~~~~ 333 (358)
.++..++..+..
T Consensus 200 ~~~~~~~~~~~~ 211 (479)
T PRK10077 200 EAIPALLFLMLL 211 (479)
T ss_pred HHHHHHHHHHHH
Confidence 877777665443
No 116
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.49 E-value=4.4e-13 Score=129.42 Aligned_cols=153 Identities=18% Similarity=0.224 Sum_probs=119.4
Q ss_pred hhHHhcHHHHHHhcCCC--------chhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHH
Q 018271 161 LATVNNISQIGESLGYP--------TSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVV 232 (358)
Q Consensus 161 ~~~~~~l~~~~~~~G~s--------~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~ 232 (358)
..+...++.+..+++++ ..+.+++.+.+.++..++.+++|+++||+ |||+.+.++.++..++.++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~------grr~~~~~~~~~~~~~~~~~ 118 (481)
T TIGR00879 45 GVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF------GRKKSLLIIALLFVIGAILM 118 (481)
T ss_pred chhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh------hhHHHHHHHHHHHHHHHHHH
Confidence 33445566666666555 78899999999999999999999999999 66777777777777766665
Q ss_pred H-hcC---chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHH---HHHHhhccCCC
Q 018271 233 A-SGF---PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRII---GYIYDNVASGE 305 (358)
Q Consensus 233 ~-~~~---~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~---g~l~~~~g~~~ 305 (358)
. ..+ .+.+++.+++.|++.+...+....++.|.+|+++|+.+.++.+.+..+|.. ++|.+. +...+..+
T Consensus 119 ~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~~--- 194 (481)
T TIGR00879 119 GLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGIL-VAYGFGSGKVSLNNTLG--- 194 (481)
T ss_pred HHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHH-HHHHHHHHhhcCCCCcc---
Confidence 3 222 236778899999999998888999999999999999999999999999994 788777 44334444
Q ss_pred CCccccccchHHHHHHHHHHHHHHHHH
Q 018271 306 GNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 306 ~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
|++.|++.+...++..+.
T Consensus 195 ---------w~~~f~~~~~~~~~~~~~ 212 (481)
T TIGR00879 195 ---------WRIPLGLQLIPAGLLFLG 212 (481)
T ss_pred ---------HHHHHHHHHHHHHHHHHH
Confidence 999999866655555433
No 117
>PRK10504 putative transporter; Provisional
Probab=99.49 E-value=2.2e-11 Score=118.38 Aligned_cols=158 Identities=11% Similarity=0.007 Sum_probs=123.0
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.++++++.++......++............|++.+. .|.+..++++......++..++.++.|+++||+ +|+.
T Consensus 255 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~------g~~~ 328 (471)
T PRK10504 255 LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF------GYRR 328 (471)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CchH
Confidence 357889999888877777766666666788888884 799999999998888899999999999999999 5666
Q ss_pred HHHHHHHHHHHHHHHHH-hc-Cch--hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 217 FIAITLATMSVGHIVVA-SG-FPG--NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~~-~~~--~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
.+..+..+.++...++. .. ..+ .+.+..++.|++.+..++....+..+..|++.+|+++|+.+....+|.. +||.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-ig~~ 407 (471)
T PRK10504 329 VLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMS-IGVT 407 (471)
T ss_pred HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHH-HHHH
Confidence 66666665555544443 21 121 2334456677777777778888889999999999999999999999995 8999
Q ss_pred HHHHHHhhcc
Q 018271 293 IIGYIYDNVA 302 (358)
Q Consensus 293 i~g~l~~~~g 302 (358)
+.|.+.+..+
T Consensus 408 i~g~ll~~~g 417 (471)
T PRK10504 408 IAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHhh
Confidence 9999988765
No 118
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.49 E-value=1.4e-12 Score=123.82 Aligned_cols=167 Identities=13% Similarity=0.078 Sum_probs=129.4
Q ss_pred chhHHHHHHHHHHhhhhhhhHHhcHHHHH-HhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHH
Q 018271 143 TLNFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 221 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~ 221 (358)
++++..+.+..++...........+|.+. +++|.|..+.++..+...++..++.++.|+++||+ |||+++..+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~------g~r~~l~~~ 87 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL------GPKKAVVFG 87 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc------CCcchHHHH
Confidence 34555666666666666566677788755 57899999999999999999999999999999999 666667766
Q ss_pred HHHHHHHHHHHH----hc-----CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 222 LATMSVGHIVVA----SG-----FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 222 ~~~~~~~~~l~~----~~-----~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
.++.+++.+.+. .. +...+++.+++.|++.+...+....++.|.+++++|+++.++...+..+|. ++||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~ 166 (399)
T PRK05122 88 LCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGAL-AIGAP 166 (399)
T ss_pred HHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHH-HHHHH
Confidence 665555433322 11 223467788999999998888888889999999999999999988888887 58999
Q ss_pred HHHHHHhhccCCCCCccccccchHHHHHHHHHHHHH
Q 018271 293 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFV 328 (358)
Q Consensus 293 i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~ 328 (358)
+++.+.+..| |+..+++..++.++
T Consensus 167 l~~~l~~~~g------------~~~~~~~~~~~~~~ 190 (399)
T PRK05122 167 LGVLLYHWGG------------LAGLGLLIMLLALL 190 (399)
T ss_pred HHHHHHHccc------------HHHHHHHHHHHHHH
Confidence 9999998877 98888766655443
No 119
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.49 E-value=2e-11 Score=116.17 Aligned_cols=181 Identities=8% Similarity=0.028 Sum_probs=119.3
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.++.++++.++...+..+...........++|.+.++.+.++.+.+++.+...+....+....++..||.. +.+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~-----~~~~ 275 (400)
T PRK11646 201 MTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRF-----RLEH 275 (400)
T ss_pred HHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----chhH
Confidence 45667788877655544443333333456789988887667778888877777766655555555555421 2233
Q ss_pred HHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHH
Q 018271 217 FIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 295 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g 295 (358)
.+..+..+.+++.+++. .++...+.+..++.+++.+...+...+++.+..|++++|+.+|+.+....+|.. +||.+.|
T Consensus 276 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~-ig~~l~G 354 (400)
T PRK11646 276 RLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGA-IGYIGGG 354 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHH-hcccchH
Confidence 34455555555555554 344444445556677777777777888999999999999999999999999994 8999999
Q ss_pred HHHhhccCCCCCccccccchHHHHHHHHHHHHHHHH
Q 018271 296 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 331 (358)
Q Consensus 296 ~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~ 331 (358)
++.|..++.+ .....|+..+++.+++.+
T Consensus 355 ~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 355 WLFDLGKALN--------QPELPWMMLGIIGLITLL 382 (400)
T ss_pred HHHHHHhhcC--------CcchHHHHHHHHHHHHHH
Confidence 9999864210 034555555555555543
No 120
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.48 E-value=1.7e-11 Score=116.70 Aligned_cols=158 Identities=13% Similarity=-0.078 Sum_probs=114.9
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.++.++++.+|...+..++.......+..+.|.+.+ ++|++..+.++......++..+|+++.|+++||+ +++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~------~~~ 281 (406)
T PRK15402 208 YKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR------PLR 281 (406)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CHH
Confidence 466788899888777766665555566667787765 5799988888887777888999999999999999 555
Q ss_pred HHHHHHHHHHHHHHHHHH-h-----cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHH
Q 018271 216 SFIAITLATMSVGHIVVA-S-----GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVC 289 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~-~-----~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~ 289 (358)
..+.++.++.+++..++. . .+...+.+..++.|++.+...+......... +++++|+..+..+....+|.. +
T Consensus 282 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~-~ 359 (406)
T PRK15402 282 SLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFT-V 359 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHH-H
Confidence 556666555555544433 1 1233445667778888776665555444333 348899999999999999985 8
Q ss_pred hHHHHHHHHhhcc
Q 018271 290 SVRIIGYIYDNVA 302 (358)
Q Consensus 290 gp~i~g~l~~~~g 302 (358)
|+.+.|.+++..+
T Consensus 360 g~~~~~~l~~~~~ 372 (406)
T PRK15402 360 GIELSKHAYLGGG 372 (406)
T ss_pred HHHHHHhcccCCc
Confidence 9999999998876
No 121
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.48 E-value=2.4e-12 Score=121.64 Aligned_cols=152 Identities=11% Similarity=0.060 Sum_probs=128.7
Q ss_pred chhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHH
Q 018271 143 TLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 222 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~ 222 (358)
++.+|.++...++...........+|.+.+++|.|..++++..+...++..+++++.|+++||+ |||+.+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~------g~k~~~~~~~ 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI------GFNRSYYLAS 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHHHHHHHH
Confidence 4567888888877777777788899999999999999999999999999999999999999999 6667777777
Q ss_pred HHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhc
Q 018271 223 ATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 301 (358)
Q Consensus 223 ~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~ 301 (358)
++.+++..+.. .++.+.+++.+++.|++.+...+.....+.+..++++|++++|+.+.+..+|.. +||.+.+.+.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~ 157 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTV-LGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccc
Confidence 77777776665 566777888899999998887777677778888889999999999999999994 8999999887653
No 122
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.46 E-value=9.4e-12 Score=133.56 Aligned_cols=179 Identities=10% Similarity=0.087 Sum_probs=132.3
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
.++.+.+++.+|.+.+..++.......+..++|.|+++ +|.+...++++.+.+.++.++|.++.|+++|+..++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~----- 291 (1140)
T PRK06814 217 LLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITL----- 291 (1140)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceee-----
Confidence 45677788999988888777777777778899999876 599999999999999999999999999999876322
Q ss_pred HHHHHHHHHHHHHHHHHHH-h--------------------cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHH
Q 018271 215 PSFIAITLATMSVGHIVVA-S--------------------GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGT 273 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~-~--------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~ 273 (358)
+ .+..+.++.+++.+.+. . .+.+.+++..+++|++.+.......+++.+..|++.+|+
T Consensus 292 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~ 370 (1140)
T PRK06814 292 L-YVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRAR 370 (1140)
T ss_pred e-eehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccccee
Confidence 2 22222222222221111 1 344455667778888888888888999999999999999
Q ss_pred HHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 274 IFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 274 ~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
++|+.++...+|.. +++++.|.+.+...+ +...+++.+.+.++.++.
T Consensus 371 v~g~~~~~~~~~~~-ig~~~~g~l~~~~~~-----------~~~~~~~~~~~~~~~~~~ 417 (1140)
T PRK06814 371 VIAANNVLNAAFMV-AGTIILALLQALGFS-----------IPWIILFIALANLIVAIL 417 (1140)
T ss_pred eeHHHHHHHHHHHH-HHHHHHHHHHHhccC-----------HHHHHHHHHHHHHHHHHH
Confidence 99999999999884 789999998865443 777776666554444433
No 123
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.46 E-value=2.4e-12 Score=123.20 Aligned_cols=176 Identities=12% Similarity=0.102 Sum_probs=117.1
Q ss_pred HhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 139 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
..++++++|.+++.+++...+...+...+|.++++ +|++..+.++..+...++..++++++|+++||+ +||+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~------g~r~~ 78 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL------GLKKH 78 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CchHH
Confidence 34678899999988888887777788888888776 799999999999999999999999999999999 55555
Q ss_pred HHHHHHHHHHHHH---HHHhcCc-h-hHHH----HHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHH
Q 018271 218 IAITLATMSVGHI---VVASGFP-G-NLYV----GSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYV 288 (358)
Q Consensus 218 ~~~~~~~~~~~~~---l~~~~~~-~-~l~~----~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i 288 (358)
+.++..+.++... ....... . .... ..++.|.+.....+....+..+ +. +++|..+|.......+|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~g~~~g~~~~~~~~g~~- 155 (420)
T PRK09528 79 LLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-VS-RRSGFEYGRARMWGSLGWA- 155 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-HH-hhccccchhhHHhhhHHHH-
Confidence 5443333332221 1111100 0 0111 1222232222222223333322 22 4567788888888889984
Q ss_pred HhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 289 CSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 289 ~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
++|+++|.+.+. + |+..|++.+++++++.++.+..
T Consensus 156 i~~~~~g~l~~~-~------------~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 156 LCAFIAGILFNI-N------------PQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHHHHHHHHHhc-C------------chHhHHHHHHHHHHHHHHHhcc
Confidence 799999999874 4 8899988887777666554443
No 124
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.46 E-value=8.3e-12 Score=122.00 Aligned_cols=172 Identities=13% Similarity=0.045 Sum_probs=119.0
Q ss_pred HHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchh-hHH-----HHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHH
Q 018271 146 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSA-INS-----LVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIA 219 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~-a~~-----~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~ 219 (358)
++..+++.++-.+-...+....|.+.++++.+.+. ..+ ..++..++..+|.++.|+++||+ |||+.+.
T Consensus 18 ~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~------Grr~~l~ 91 (490)
T PRK10642 18 ITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY------GRQKILA 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ccHHHHH
Confidence 33444455554444445555677777776433211 111 14666788999999999999999 7888888
Q ss_pred HHHHHHHHHHHHHH-hcCch--------hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHh
Q 018271 220 ITLATMSVGHIVVA-SGFPG--------NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 290 (358)
Q Consensus 220 ~~~~~~~~~~~l~~-~~~~~--------~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~g 290 (358)
++.++++++.++.+ .++.. .+++.+++.|++.|+.++....++.|.+|+++||...++...+..+|.. ++
T Consensus 92 ~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~-lg 170 (490)
T PRK10642 92 ITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFV-LG 170 (490)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH-HH
Confidence 89998888888777 45543 2678899999999999999999999999999999999999887777774 66
Q ss_pred HHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHH
Q 018271 291 VRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFV 328 (358)
Q Consensus 291 p~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~ 328 (358)
+.+...+....+. ......+||+.|++.+.+.++
T Consensus 171 ~~~~~~~~~~~~~----~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 171 AGVVVLISTIVGE----ANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHHHHHHhcCH----HHhcCccHHHHHHHHHHHHHH
Confidence 6555443321100 000011299999987655444
No 125
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.46 E-value=4.7e-11 Score=113.67 Aligned_cols=174 Identities=11% Similarity=0.127 Sum_probs=108.6
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHh-cHHHHHHhcCCCchhhHHHHHHHH-HHHHHhhhHhHHHHHHHhhhcCCc
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVN-NISQIGESLGYPTSAINSLVSLWS-IWNFLGRFGGGYVSDIVLHRMGWE 213 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~G~s~~~a~~~~~~~~-i~~~~g~~~~G~lsDr~~~k~~~g 213 (358)
+.++.+|++.+|.+.+..++.......... ..+.+.++.|++.++.+++..... ++..+|.++.|++.||+ +
T Consensus 201 ~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~------g 274 (402)
T PRK11902 201 PLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL------G 274 (402)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH------h
Confidence 356778898888776665554433222222 334455668999998888876654 56899999999999999 4
Q ss_pred hHHHHHHHHHHHHHHHH---HHHh-c-CchhHHHHHH----HHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhh
Q 018271 214 RPSFIAITLATMSVGHI---VVAS-G-FPGNLYVGSI----IVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPV 284 (358)
Q Consensus 214 r~~~~~~~~~~~~~~~~---l~~~-~-~~~~l~~~~~----l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~i 284 (358)
++..+..+..+..+..+ ++.. . +.+.+++..+ ..|++.+...+....++.+.+|.+ .+++.+....+
T Consensus 275 ~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l 350 (402)
T PRK11902 275 LYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT----QYALLSALASV 350 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHH
Confidence 44444444433333322 2222 2 2233333333 344445555556666666666644 44555555566
Q ss_pred HHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 285 GSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 285 g~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
+.. .+++++|.++|+.| |+..|.+.+.++++++++
T Consensus 351 ~~~-~~~~~~G~l~~~~G------------~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 351 GRV-YVGPTSGYLVEAYG------------WPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HHH-HHHHHHHHHHHHhC------------hHHHHHHHHHHHHHHHHH
Confidence 664 34558999999998 999999888877776544
No 126
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.46 E-value=2.8e-12 Score=120.43 Aligned_cols=169 Identities=11% Similarity=0.002 Sum_probs=122.5
Q ss_pred HHHHhhhhhhhHHhcHHHHH-HhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHH
Q 018271 152 AMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHI 230 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~-~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~ 230 (358)
.+++...+.......+|.+. +++|.|..+.++..+...+...+..++.|+++||+|+ ||.++..+..+..++.+
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~-----r~~~~~~~~~~~~~~~~ 79 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGD-----RKGLILFCCLLAALACL 79 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----chHHHHHHHHHHHHHHH
Confidence 34444444455666777665 5789999999999999999999999999999999942 23344445555555555
Q ss_pred HHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHH--HHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCC
Q 018271 231 VVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTI--FNTIAIASPVGSYVCSVRIIGYIYDNVASGEGN 307 (358)
Q Consensus 231 l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~--~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~ 307 (358)
+.. .++.+.+++..++.|.+.+...+....+..|..+++.|+.+ .+....+..+|. +++|++++.+.+..+
T Consensus 80 ~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~ig~~~~~~l~~~~~----- 153 (375)
T TIGR00899 80 LFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAW-VIGPPLAFWLALGFG----- 153 (375)
T ss_pred HHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHH-HHhhhHHHHHHHhcc-----
Confidence 544 45555666666777766666666667778888887766644 577777888888 489999999998877
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 308 SCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 308 ~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
|++.|++.+.+.++..+..+++.+
T Consensus 154 -------~~~~f~~~~~~~~~~~~~~~~~~~ 177 (375)
T TIGR00899 154 -------FTVMFLTAALAFVLCGVLVWLFLP 177 (375)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999998877777665554443
No 127
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.46 E-value=5.1e-13 Score=129.59 Aligned_cols=146 Identities=14% Similarity=0.151 Sum_probs=121.7
Q ss_pred hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH---hcCchhHHHHHHHHHh
Q 018271 173 SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA---SGFPGNLYVGSIIVGV 249 (358)
Q Consensus 173 ~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~---~~~~~~l~~~~~l~g~ 249 (358)
++|++..+.+++.+.+.++..++.++.|+++||+ +||+.+..+.++.+++.++.. ..+...+++.+++.|+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY------VFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGL 143 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh------CcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 5789999999999999999999999999999999 566667667666666655542 2345567888999999
Q ss_pred hhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhc-cCCCCCccccccchHHHHHHHHHHHHH
Q 018271 250 CYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV-ASGEGNSCNGTHCFMLSFLIMASVAFV 328 (358)
Q Consensus 250 ~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~-g~~~~~~~~g~~~~~~~f~~~~~~~~~ 328 (358)
+.+..++....+++|.+|+++|++..|+.+.+..+|.. ++|++.+.+.+.. + |+..|++.+++.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-i~~~l~~~l~~~~~g------------w~~~f~i~~~~~~~ 210 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTF-IFLPISGWLCESWGG------------WPMIFYVFGIVGCA 210 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCC------------CCeehhhhhHHHHH
Confidence 99999999999999999999999999999999999995 8999999998874 6 99999998887766
Q ss_pred HHHHHHHHH
Q 018271 329 GCLVAFLLF 337 (358)
Q Consensus 329 ~~~~~~~~~ 337 (358)
..++.+.+.
T Consensus 211 ~~~~~~~~~ 219 (465)
T TIGR00894 211 WSLLWFVFP 219 (465)
T ss_pred HHHHHHHHh
Confidence 655544443
No 128
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.45 E-value=3e-11 Score=129.73 Aligned_cols=180 Identities=13% Similarity=0.119 Sum_probs=130.5
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCch-hhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCc
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTS-AINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWE 213 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~-~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~g 213 (358)
.++.+++++.+|...+..++.....+.+..++|.+.+ .+|++.. ..+++.+...++.++|.++.|+++||++
T Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~------ 297 (1146)
T PRK08633 224 NLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHI------ 297 (1146)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCce------
Confidence 3556778888887777666666666667778888776 5699988 8899999999999999999999999984
Q ss_pred hHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 214 RPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 214 r~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
++..+.++.++.+++.+++. ..+...+++..++.|++.+...+...+++.+..|++.||+++|+.++...+|.. +++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~-~~~~ 376 (1146)
T PRK08633 298 ELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGML-LFLA 376 (1146)
T ss_pred EccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHH-HHHH
Confidence 33445555555555555544 344455666778888888887778888999999999999999999999988884 6666
Q ss_pred HHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 293 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 293 i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
+++.+...... +...|++.+.+.++..+..
T Consensus 377 ~~~~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 406 (1146)
T PRK08633 377 LTTLFSGLGLS-----------PAGLFYLIALVTLIGTLYT 406 (1146)
T ss_pred HHHHHHHhccC-----------HHHHHHHHHHHHHHHHHHH
Confidence 66655442111 5566666665555444333
No 129
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.43 E-value=7.7e-11 Score=110.97 Aligned_cols=154 Identities=17% Similarity=0.149 Sum_probs=108.5
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.++.++++.+|...+...+.....+....+.|.+.+ ++|+++.+.+.+.+...++..+++++.|+++||+ +++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~------~~~ 272 (385)
T TIGR00710 199 FLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW------GAK 272 (385)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CHH
Confidence 456778888887777666666666677777887776 6799999999999999999999999999999999 555
Q ss_pred HHHHHHHHHHHHHHHHHH-h---c-Cc-hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHH
Q 018271 216 SFIAITLATMSVGHIVVA-S---G-FP-GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVC 289 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~-~---~-~~-~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~ 289 (358)
..+..+..+..++.+++. . . +. ..++...++.|++.+...+.......|.+| ++++++.++.+.....++.+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~ 351 (385)
T TIGR00710 273 SLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIV 351 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHH
Confidence 555545444444443332 1 1 11 223444567778888777777888888877 678999999887776555455
Q ss_pred hHHHHHHHH
Q 018271 290 SVRIIGYIY 298 (358)
Q Consensus 290 gp~i~g~l~ 298 (358)
+| +.|.+.
T Consensus 352 ~~-~~~~~~ 359 (385)
T TIGR00710 352 GY-LVSLIH 359 (385)
T ss_pred HH-HHHhcc
Confidence 55 455443
No 130
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.43 E-value=1.2e-10 Score=110.33 Aligned_cols=188 Identities=18% Similarity=0.131 Sum_probs=138.2
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcC-CCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLG-YPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G-~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
..+++|+|++....+..++...+...+.++.+.++++.| ++....+...++..++.++.-...+++..|+ +-+
T Consensus 200 ~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~------g~~ 273 (400)
T PF03825_consen 200 ALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF------GIK 273 (400)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc------CHH
Confidence 467899999988888888777777778888899999997 7777777777777778887777777777777 666
Q ss_pred HHHHHHHHHHHHHHHHHH-h-cCchhHHHH----HHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHH-HhhhHHHH
Q 018271 216 SFIAITLATMSVGHIVVA-S-GFPGNLYVG----SIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAI-ASPVGSYV 288 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~-~-~~~~~l~~~----~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~-~~~ig~~i 288 (358)
.++.++.+..++=..+++ . .+.+..+.. ..+.|+.++..+.....++.+..|++.|+++.++.+. ..++|. .
T Consensus 274 ~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~-~ 352 (400)
T PF03825_consen 274 WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGG-A 352 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHH-H
Confidence 777777777776555555 3 233332222 2468999998888899999999999999999999854 568888 4
Q ss_pred HhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 289 CSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 289 ~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
+|..++|+++|+.|.++ ...|...+.+.+++.++..++.+++.
T Consensus 353 iG~~igG~l~~~~g~~~------~~~~~~~~~v~a~~~~~~~~~f~~~f 395 (400)
T PF03825_consen 353 IGSLIGGWLYDAFGARG------MFDWSAVFLVFAVMALVILVLFVILF 395 (400)
T ss_pred HHHHHHHHHHHHhcchh------hhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 89999999999987321 11144555555655555555444443
No 131
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.42 E-value=7.8e-12 Score=118.74 Aligned_cols=171 Identities=13% Similarity=0.122 Sum_probs=121.1
Q ss_pred chhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHH
Q 018271 143 TLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 221 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~ 221 (358)
||.+|.+...+++.......+..++|.+++ ++|++..+.++..+...++..+++++.|+++||+ +||+.+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~------grr~~~~~~ 74 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL------GLKKHLLWI 74 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CcHHHHHHH
Confidence 578898888888888777778888888876 4699999999999999999999999999999999 555555444
Q ss_pred HHHHHHHHH---HHHhcC------chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 222 LATMSVGHI---VVASGF------PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 222 ~~~~~~~~~---l~~~~~------~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
....++... .+.... .....+..++.|++.+...+....+..|.-+ +++..+|.....+.+|. ++||.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~-~~g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGW-ALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHH-HHHHH
Confidence 333332222 111111 1122334566677777666666666666432 33556777777888888 47999
Q ss_pred HHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 018271 293 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 293 i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
++|.+.+. + |+..|++.+++.++.+++.+.
T Consensus 152 ~~g~l~~~-~------------~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 152 IAGILFSI-D------------PQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred HHhhhhcc-C------------chHHHHHHHHHHHHHHHHHHH
Confidence 99988764 4 999999888877777655433
No 132
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.42 E-value=1.6e-11 Score=117.14 Aligned_cols=181 Identities=11% Similarity=0.020 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
.++.+...+++...........+|.+.+++|.+..+.+++.+...++..++.+..|++.||+ |||+.+..+..+
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~------G~r~~~~~g~~l 77 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL------SYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CchHHHHHHHHH
Confidence 34555555555444444445778889889999999999999999999999999999999999 777788888888
Q ss_pred HHHHHHHHH----hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhh
Q 018271 225 MSVGHIVVA----SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN 300 (358)
Q Consensus 225 ~~~~~~l~~----~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~ 300 (358)
.+++.+++. ..+...+++.+++.|++.+...+...+++.+..|++++++..++.+....+|.. ++|.+.+.+...
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~-~g~~i~~~l~~~ 156 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSI-IGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 888777653 234566778889999999999888899999999999999999999999999994 899988887643
Q ss_pred ccCCCC-Cc-------------cccccchHHHHHHHHHHHHHHHHH
Q 018271 301 VASGEG-NS-------------CNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 301 ~g~~~~-~~-------------~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
.....+ .. -....+|+++|++.+++.++.+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 157 NLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred CCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 210000 00 000123999998888876665443
No 133
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.42 E-value=2.3e-11 Score=116.93 Aligned_cols=158 Identities=15% Similarity=0.108 Sum_probs=112.8
Q ss_pred HHHhhhhhhhHHhcHHHHHHhcC---CCchhh---HHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHH
Q 018271 153 MLCGMGSGLATVNNISQIGESLG---YPTSAI---NSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS 226 (358)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~~~G---~s~~~a---~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~ 226 (358)
.++-..-...+....|.+.++++ .+..+. +...+...++..+|.+++|+++||+ |||+.+..+..+..
T Consensus 31 ~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~------Grr~~l~~~~~~~~ 104 (432)
T PRK10406 31 NLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH------GRKKSMLISVCMMC 104 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CcHHHHHHHHHHHH
Confidence 33333333444555667777764 444432 2334455566679999999999999 77788888888888
Q ss_pred HHHHHHH-hcCc--------hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 227 VGHIVVA-SGFP--------GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 227 ~~~~l~~-~~~~--------~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
++.++.+ .++. ..+++.+++.|++.|+.++....+++|.+|+++||...++...+...|.. .++.+.+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~-~~~~~~~~~ 183 (432)
T PRK10406 105 FGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQL-LALLVVVVL 183 (432)
T ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 8887766 3443 24778899999999999999999999999999999999988777777763 566554443
Q ss_pred Hh--------hccCCCCCccccccchHHHHHHHHHHHHHH
Q 018271 298 YD--------NVASGEGNSCNGTHCFMLSFLIMASVAFVG 329 (358)
Q Consensus 298 ~~--------~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~ 329 (358)
.. .+| ||..|++.++..++.
T Consensus 184 ~~~~~~~~~~~~g------------Wr~~F~i~~~~~ll~ 211 (432)
T PRK10406 184 QQTLEDAELREWG------------WRIPFALGAVLAVVA 211 (432)
T ss_pred HHhCCHHHHhccc------------hHHHHHHHHHHHHHH
Confidence 32 234 999998876655543
No 134
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.41 E-value=7.3e-11 Score=110.56 Aligned_cols=184 Identities=14% Similarity=0.159 Sum_probs=143.0
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc----CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcC
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL----GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 211 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~ 211 (358)
...+++|++++|.+.+........+..+....+.|.+.+ +.+....|.+.++..+..++.-.+..++.+|+
T Consensus 212 ~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri----- 286 (412)
T PF01306_consen 212 DVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI----- 286 (412)
T ss_dssp HHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 357889999999887766666666666766677777654 34445577788888888899999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHH-HHHhhhHHHHH
Q 018271 212 WERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI-AIASPVGSYVC 289 (358)
Q Consensus 212 ~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~-~~~~~ig~~i~ 289 (358)
|.|..+.++..++++=.++.+ .++++.+.+.-.+.|+-.+.......-++++.|+++..++.+.+. +.+..+|.. +
T Consensus 287 -g~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~-i 364 (412)
T PF01306_consen 287 -GAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGII-I 364 (412)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHH-H
T ss_pred -ChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHH-H
Confidence 566667777777777666666 677777888889999988877777888999999999999999986 678888885 5
Q ss_pred hHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 290 SVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 290 gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
.+.++|.++|+.| ++.+|++++.+.+...+++.+..+
T Consensus 365 ~s~~~G~lyd~~G------------~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 365 LSPLAGYLYDRIG------------FQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HhhhHHhhHhhcC------------cHHHHHHHHHHHHHHHHHheeeec
Confidence 6789999999998 999999999887777766665543
No 135
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.41 E-value=3.9e-12 Score=117.04 Aligned_cols=180 Identities=14% Similarity=0.176 Sum_probs=148.7
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
+.+++.+++.+....++.++..-+..+.......+.. ++|++..+..++....++.+++|.++.|++.||++ -
T Consensus 244 t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg------~ 317 (438)
T COG2270 244 TFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFG------S 317 (438)
T ss_pred HHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------C
Confidence 4667777777777888888887777778888888887 88999999999999999999999999999999995 3
Q ss_pred HHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHH
Q 018271 215 PSFIAITLATMSVGHIV-VASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRI 293 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l-~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i 293 (358)
|.++.++.++..+..+. +.......++++.++.|++.|+.++..-++..++.|+++-+..+|++++.++.++ ++||.+
T Consensus 318 k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S-~~gp~l 396 (438)
T COG2270 318 KPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAAS-FLGPFL 396 (438)
T ss_pred ceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHH-HHHHHH
Confidence 34455555555444443 3344456677788999999999999999999999999999999999999999999 599999
Q ss_pred HHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 294 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 294 ~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
.+.+.+.+|+ -|..+....++.+++.++.
T Consensus 397 v~v~t~iTg~-----------~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 397 VAVITQITGS-----------SRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred HHHHHHHhcc-----------hhhHHHHHHHHHHhhHhhE
Confidence 9999999987 8888888888777776543
No 136
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.41 E-value=8.7e-12 Score=121.85 Aligned_cols=178 Identities=17% Similarity=0.176 Sum_probs=132.3
Q ss_pred hchhHHHHHHHHHHhhhhh----hhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 142 CTLNFWLLFVAMLCGMGSG----LATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
++++++..+.++.+..... ....+.++++.+++|-+ ....|+.+...++..++.++.|.++|.+ |||++
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf------GRr~~ 110 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF------GRRYF 110 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh------cchHH
Confidence 3456655544443332222 22334567888899865 5567888899999999999999999999 88899
Q ss_pred HHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHH
Q 018271 218 IAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGY 296 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~ 296 (358)
++++.++.+++.+..+ .++...++....+.|++.|... +....++|+.|.+.|+.++++......+.. ..+|.++..
T Consensus 111 ~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~-~~~~~ia~~ 188 (599)
T PF06609_consen 111 FIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITT-WISPLIAQL 188 (599)
T ss_pred HHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhh-cccHHHHHH
Confidence 9999999999999888 6777888889999999876554 556678999999999888877765554444 356666655
Q ss_pred HHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018271 297 IYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRT 340 (358)
Q Consensus 297 l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 340 (358)
+..+.+ |||.|++..+...++++..++++.++
T Consensus 189 ~~~~~~------------WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 189 FAAHSG------------WRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred hccCCC------------cchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 544333 99999999998888887666655443
No 137
>PTZ00207 hypothetical protein; Provisional
Probab=99.40 E-value=1.2e-11 Score=121.49 Aligned_cols=158 Identities=11% Similarity=0.091 Sum_probs=122.3
Q ss_pred hhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHh---
Q 018271 158 GSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS--- 234 (358)
Q Consensus 158 ~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~--- 234 (358)
+..|.+....|.+.+++|++..+.+++.++... ..++.+..|+++||+ |+|+++.++.++..++.++.+.
T Consensus 41 g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~------G~R~vllig~ll~~iG~ll~ala~~ 113 (591)
T PTZ00207 41 SFMYAFNLISGAMQARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYL------GPRPIFVLSMTVFCLGTLLFALTFQ 113 (591)
T ss_pred HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHh------CcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344566677788888999999998888776443 345666789999999 7788888888888888877763
Q ss_pred ----cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccc
Q 018271 235 ----GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCN 310 (358)
Q Consensus 235 ----~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~ 310 (358)
.+.+.+.+.+++.|++.+.........+.++|| ++||.+.|+...+..+|+.+++|+..+++.+ +
T Consensus 114 ~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~-------- 182 (591)
T PTZ00207 114 EVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--N-------- 182 (591)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h--------
Confidence 245667778889998888777777778889997 7899999999999999997677766666543 2
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 311 GTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 311 g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
|+..|++.+++.++..++.+.+.
T Consensus 183 ----~~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 183 ----TSAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhhe
Confidence 77888888887777766655543
No 138
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.40 E-value=4e-11 Score=112.10 Aligned_cols=141 Identities=11% Similarity=0.021 Sum_probs=103.9
Q ss_pred HHHhhhchh---HHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHH-HHHHHhhhHhHHHHHHHhhhcCC
Q 018271 137 ILQSVCTLN---FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWS-IWNFLGRFGGGYVSDIVLHRMGW 212 (358)
Q Consensus 137 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~-i~~~~g~~~~G~lsDr~~~k~~~ 212 (358)
.++.++++. ++.+.+..++.....+....++|.+++++|++.++.+.+..... +...+|.+++|+++||+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~------ 272 (356)
T TIGR00901 199 IREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL------ 272 (356)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh------
Confidence 455566654 67666666666677777888999999989999999888777655 67889999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHH-h-----------cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHH
Q 018271 213 ERPSFIAITLATMSVGHIVVA-S-----------GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAI 280 (358)
Q Consensus 213 gr~~~~~~~~~~~~~~~~l~~-~-----------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~ 280 (358)
+|+..+..+.++.++...++. . ++.+.+....++.+++.+..++...+++.|.+|++++|+.+|+.+.
T Consensus 273 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 352 (356)
T TIGR00901 273 NILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSS 352 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHH
Confidence 544445555555544444322 1 1223344556677888888889999999999999999999999876
Q ss_pred Hhh
Q 018271 281 ASP 283 (358)
Q Consensus 281 ~~~ 283 (358)
..+
T Consensus 353 ~~~ 355 (356)
T TIGR00901 353 LSA 355 (356)
T ss_pred HHh
Confidence 553
No 139
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.40 E-value=2.1e-11 Score=115.15 Aligned_cols=157 Identities=6% Similarity=0.025 Sum_probs=126.7
Q ss_pred HHhcHHHHHHhcCCCchh-hHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhH
Q 018271 163 TVNNISQIGESLGYPTSA-INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNL 240 (358)
Q Consensus 163 ~~~~l~~~~~~~G~s~~~-a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l 240 (358)
.....|++.+++|++.++ .+.+.+.+..+..+..+.+|+++||+ |-|+++.++.+...+..++.. ..+...+
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl------G~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL------RYKPVLVLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh------CchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567788899999999 99999999999999999999999999 555667777777777777666 5567788
Q ss_pred HHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHH
Q 018271 241 YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFL 320 (358)
Q Consensus 241 ~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~ 320 (358)
.+.+++.|++.|+.+ ....++...+|+++|+++.|+.+.+..+|.+ +++++++.+ ...|-+ .|....+
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~-Ia~~L~qll-~s~gWr---------~y~~Ln~ 186 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVF-LSSVLGQLL-VTLGWI---------SYSTLNI 186 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-HhcCch---------hHHHHHH
Confidence 899999999999999 8899999999999999999999999999995 788888884 444411 1455556
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018271 321 IMASVAFVGCLVAFLLF 337 (358)
Q Consensus 321 ~~~~~~~~~~~~~~~~~ 337 (358)
+..+...+++++++++.
T Consensus 187 Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 187 ISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 66666666666665554
No 140
>PRK09952 shikimate transporter; Provisional
Probab=99.40 E-value=6.7e-11 Score=113.96 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=114.3
Q ss_pred HHHHHHHHHHhhhhhhhHHhcHHHH-HHhc--CCCchhhHHHH-----HHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 146 FWLLFVAMLCGMGSGLATVNNISQI-GESL--GYPTSAINSLV-----SLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~--G~s~~~a~~~~-----~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
++..++..++-..-...+....|.+ .+++ +.++.. ++.. ++..++..+|.++.|+++||+ |||+.
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~------Grr~~ 96 (438)
T PRK09952 24 ALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL------GRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh------ccHHH
Confidence 3334444444333333333344433 3344 566553 3332 234456778889999999999 77788
Q ss_pred HHHHHHHHHHHHHHHH-hcCch--------hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHH
Q 018271 218 IAITLATMSVGHIVVA-SGFPG--------NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYV 288 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~-~~~~~--------~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i 288 (358)
+..+.++.+++.++.+ .++.. .+++.+++.|++.|+.++....++.|.+|+++||...+..+.+..+|..
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~- 175 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL- 175 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH-
Confidence 8888888888887776 45543 3667899999999999988899999999999999999999988888884
Q ss_pred HhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHH
Q 018271 289 CSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFV 328 (358)
Q Consensus 289 ~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~ 328 (358)
+++.+.+.+....+.. -....+||..|++.++..++
T Consensus 176 l~~~~~~~l~~~~~~~----~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 176 LSTGLVSLISMMTTDE----QFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HHHHHHHHHHHhCCHH----HhhccChHHHHHHHHHHHHH
Confidence 6766666654321100 00011299999887665433
No 141
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.39 E-value=2.2e-11 Score=115.57 Aligned_cols=178 Identities=11% Similarity=0.016 Sum_probs=118.9
Q ss_pred chhHHHHHHHHHHhhhhhhhHHhcHHHHH-HhcCCCchhhHHHHHHHHH-HHHHhhhHhHHHHHHHhhhcCCchHHHHHH
Q 018271 143 TLNFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSI-WNFLGRFGGGYVSDIVLHRMGWERPSFIAI 220 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~G~s~~~a~~~~~~~~i-~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~ 220 (358)
|.+.|.+++..++.......+...+|.+. +++|.|.++.++..+...+ +..++.+..++ +||+++ ||.++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~-----r~~~~~~ 87 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGD-----RKSLIVF 87 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccc-----hhHHHHH
Confidence 55667777777777766666777777765 5679999999998776554 66666666666 999952 3344444
Q ss_pred HHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcch--HHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 221 TLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHM--GTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 221 ~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~--g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
+.+...+...++. ..+.+.+++...+.+...+...+....+..|..+++.| +...++.+.+..+|. +++|++++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~-~~g~~i~~~l 166 (393)
T PRK15011 88 CCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAW-VIGPPLAYAL 166 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH-HHhhHHHHHH
Confidence 4444444444444 34444444444444433344555666777777665544 344578888889999 5899999999
Q ss_pred HhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 298 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 298 ~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
.++.| |+..|++.++..++.++..++..++
T Consensus 167 ~~~~g------------w~~~f~~~~~~~~~~~~~~~~~~~~ 196 (393)
T PRK15011 167 AMGFS------------FTVMYLSAAVAFIVCGVMVWLFLPS 196 (393)
T ss_pred HHhcC------------hHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 99887 9999999888777776555444443
No 142
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.39 E-value=3.1e-11 Score=118.38 Aligned_cols=150 Identities=15% Similarity=0.149 Sum_probs=111.7
Q ss_pred CCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcC------chhHHHHHHHHH
Q 018271 176 YPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGF------PGNLYVGSIIVG 248 (358)
Q Consensus 176 ~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~------~~~l~~~~~l~g 248 (358)
.+..+.+++.+...++..+|.+++|+++||+ |||+.+.++.++..++.++.. ..+ ...+++.+++.|
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~------Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G 126 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKL------GRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLG 126 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------ccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHH
Confidence 4455667889999999999999999999999 777777777777777666554 232 346778899999
Q ss_pred hhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC----CC---CCccc----cccchHH
Q 018271 249 VCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS----GE---GNSCN----GTHCFML 317 (358)
Q Consensus 249 ~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~----~~---~~~~~----g~~~~~~ 317 (358)
++.|+.++..+.++.|.+|++.||++.++.+....+|. ++++.+...+...... .+ ...|. ...+||.
T Consensus 127 ~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~ 205 (502)
T TIGR00887 127 VGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGI-LAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRI 205 (502)
T ss_pred HHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccccccccccccccccccchhcccHHH
Confidence 99999999999999999999999999999999999998 4788777765432210 00 00000 1124999
Q ss_pred HHHHHHHHHHHHHHH
Q 018271 318 SFLIMASVAFVGCLV 332 (358)
Q Consensus 318 ~f~~~~~~~~~~~~~ 332 (358)
.|.+.++..++..+.
T Consensus 206 ~~~~~~ip~~i~~~~ 220 (502)
T TIGR00887 206 LIGFGAVPALLALYF 220 (502)
T ss_pred HHHHHHHHHHHHHHH
Confidence 997776666555443
No 143
>PRK10054 putative transporter; Provisional
Probab=99.38 E-value=4.5e-11 Score=113.58 Aligned_cols=175 Identities=10% Similarity=-0.021 Sum_probs=123.6
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH---hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE---SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
++.++++.+|.+.+..++.......+..+.+.+.. +.+.+....+.+.+...+.....++..|++.||+ ++
T Consensus 200 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~------~~ 273 (395)
T PRK10054 200 SVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA------NI 273 (395)
T ss_pred hhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC------Cc
Confidence 45678888887777776665555555566666654 3355666667777777777777778889999998 55
Q ss_pred HHHHHHHHHHHHHHHHHHHh--cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 215 PSFIAITLATMSVGHIVVAS--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
+..+..+..+..++..++.. .+...+.+..++.|++.+...+.....+.+..|++.+|+.+|..+ ...+|.. +||+
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~-~Gp~ 351 (395)
T PRK10054 274 RPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAA-INPL 351 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHH-HHHH
Confidence 56666666666666555442 233344556677888877666777788999999999999998765 4557884 8999
Q ss_pred HHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 293 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 293 i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
++|.++|+.| +...|++.+.+..++.++
T Consensus 352 ~~G~l~~~~g------------~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 352 VSGVILTTLP------------PWSLFVILALAIVAAWLL 379 (395)
T ss_pred HHHHHHHHcC------------hhhHHHHHHHHHHHHHHH
Confidence 9999999987 777887766655555433
No 144
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.38 E-value=8.9e-12 Score=117.83 Aligned_cols=160 Identities=9% Similarity=0.041 Sum_probs=118.3
Q ss_pred HHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHH
Q 018271 147 WLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS 226 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~ 226 (358)
+.+.+.+++...+.......+|.+.+++|+|..+.++..+...+...++.+++|.++||++|+.. .+..+..+..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~--~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIII--ALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH--HHHHHHHHHHHHH
Confidence 44556666666655667788999999999999999999999999999999999999999954321 1122222222222
Q ss_pred HHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCC
Q 018271 227 VGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE 305 (358)
Q Consensus 227 ~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~ 305 (358)
+ .... .++.+.+++...+.+.+.+...+...++..+. .++|+..+|.....+.+|. +++|+++|.+.+..|
T Consensus 85 ~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~-~~g~~l~g~l~~~~g--- 156 (382)
T TIGR00902 85 A--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAF-IIGSALFGGLIGMFD--- 156 (382)
T ss_pred H--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHH-HHHHHHHHHHHHHcC---
Confidence 1 1222 34566677777778877777777777776553 4678999999999999998 589999999999988
Q ss_pred CCccccccchHHHHHHHHHH
Q 018271 306 GNSCNGTHCFMLSFLIMASV 325 (358)
Q Consensus 306 ~~~~~g~~~~~~~f~~~~~~ 325 (358)
|+..|++.+.+
T Consensus 157 ---------~~~~f~~~~~~ 167 (382)
T TIGR00902 157 ---------EQNILAILTAG 167 (382)
T ss_pred ---------hhHHHHHHHHH
Confidence 99999887655
No 145
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.38 E-value=3.7e-12 Score=101.67 Aligned_cols=132 Identities=13% Similarity=0.189 Sum_probs=106.9
Q ss_pred HHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHH
Q 018271 186 SLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYE 264 (358)
Q Consensus 186 ~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e 264 (358)
+...++..++.++.|++.||+ +||+.+..+..+..++.++.. ..+...+.+..++.|++.+...+....++.|
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRF------GRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIAD 78 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhc------chhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 456678889999999999999 566666666666666666555 4555667777889999988888888999999
Q ss_pred hhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 265 IFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 265 ~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
.+|+++|++..++.+....+|.. ++|.+.+.+.+..+ |++.+++.+.+.+++.+....+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 79 IYPPEERGVALGLMSAGIALGPL-LGPPLGGVLAQFLG------------WRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HCChhhhhHHHHHHHHhHHHHHH-HhHHhHHHHhcccc------------hHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999994 89999999988776 9999998887777776554443
No 146
>PRK10133 L-fucose transporter; Provisional
Probab=99.38 E-value=8.4e-11 Score=113.22 Aligned_cols=170 Identities=14% Similarity=0.147 Sum_probs=123.8
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHH-H-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIG-E-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
.+++++++.++...+..++.....+....|++.++ + ..|+++.++++....+.++.++|+++.|++.||+ ++
T Consensus 251 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~------g~ 324 (438)
T PRK10133 251 LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF------AP 324 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CH
Confidence 45678888888777766776666666777888774 4 4699999999999999999999999999999999 55
Q ss_pred HHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHH
Q 018271 215 PSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRI 293 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i 293 (358)
++.+..+..+.++.+.+.. ..+. ..+....+.|++.+..++...+...+.+|+ +.+++.++..+ ..+|+. ++|++
T Consensus 325 ~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~-~~~~i 400 (438)
T PRK10133 325 HKVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGG-IVTPV 400 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhH-Hhccch-HHHHH
Confidence 5555555555544444333 2222 334567788999999999999999988875 45677777754 335664 67889
Q ss_pred HHHHHhhccCCCCCccccccchHHHHHHHHHHHH
Q 018271 294 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAF 327 (358)
Q Consensus 294 ~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~ 327 (358)
.|.+.|..|+ .+..|++..++.+
T Consensus 401 ~G~l~~~~g~-----------~~~~~~v~~~~~~ 423 (438)
T PRK10133 401 MGFVSDAAGN-----------IPTAELIPALCFA 423 (438)
T ss_pred HHHHHHhccc-----------hHHHHHHHHHHHH
Confidence 9999998763 5677765554433
No 147
>PRK15075 citrate-proton symporter; Provisional
Probab=99.38 E-value=6.2e-11 Score=114.04 Aligned_cols=159 Identities=17% Similarity=0.119 Sum_probs=117.8
Q ss_pred HHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHH-HHHH-----HHHHHHhhhHhHHHHHHHhhhcCCchHHHHH
Q 018271 146 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSL-VSLW-----SIWNFLGRFGGGYVSDIVLHRMGWERPSFIA 219 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~-~~~~-----~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~ 219 (358)
...++++.++...-...+....|.+.++++.+..+.+.+ .+.. .+...+|.++.|+++||+ |||+.+.
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~------Grr~~l~ 90 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV------GRRKGLI 90 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh------chHHHHH
Confidence 344555666666666677788899999998877664333 2222 223357889999999999 7777788
Q ss_pred HHHHHHHHHHHHHH-hcCch--------hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHh
Q 018271 220 ITLATMSVGHIVVA-SGFPG--------NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 290 (358)
Q Consensus 220 ~~~~~~~~~~~l~~-~~~~~--------~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~g 290 (358)
.+..+.+++.++.. .++.. .+++.+++.|++.+..++....+++|.+|+++|++..++.+.+..+|. .++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~-~~g 169 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAV-VFA 169 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHH-HHH
Confidence 88888888777776 44443 356788999999998888888999999999999999999988888877 467
Q ss_pred HHHHHHHH--------hhccCCCCCccccccchHHHHHHHH
Q 018271 291 VRIIGYIY--------DNVASGEGNSCNGTHCFMLSFLIMA 323 (358)
Q Consensus 291 p~i~g~l~--------~~~g~~~~~~~~g~~~~~~~f~~~~ 323 (358)
+.+++.+. +..| |++.|++..
T Consensus 170 ~~~g~~l~~~~~~~~~~~~g------------Wr~~f~~~~ 198 (434)
T PRK15075 170 ALLGYLLNQWLSPAQMAEWG------------WRIPFLIGC 198 (434)
T ss_pred HHHHHHHHHhCCHHHHhccc------------hHHHHHHHH
Confidence 77666653 2333 999998643
No 148
>TIGR00898 2A0119 cation transport protein.
Probab=99.37 E-value=3.5e-12 Score=124.98 Aligned_cols=147 Identities=19% Similarity=0.184 Sum_probs=124.1
Q ss_pred hcHHHHHHhcCCC---chhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhH
Q 018271 165 NNISQIGESLGYP---TSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNL 240 (358)
Q Consensus 165 ~~l~~~~~~~G~s---~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l 240 (358)
...|.+.+++|++ ..+.++..+++.++..+|.++.|+++||+ |||+.+.++.++.+++.++.. .++...+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~------Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF------GRKKVLLLSTLVTAVSGVLTAFSPNYTVF 183 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc------cchHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 3567777888998 88899999999999999999999999999 677777778777777777666 5677788
Q ss_pred HHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHH
Q 018271 241 YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFL 320 (358)
Q Consensus 241 ~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~ 320 (358)
++.+++.|++.++..+....++.|.+|+++|+...++...+..+|. +++|.+++.+.+ |++.|+
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~~~~---------------wr~~~~ 247 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGL-VLLPLVAYFIPD---------------WRWLQL 247 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHH-HHHHHHHHHhhH---------------HHHHHH
Confidence 8899999999999999999999999999999999999988888888 477877655432 999999
Q ss_pred HHHHHHHHHHHHH
Q 018271 321 IMASVAFVGCLVA 333 (358)
Q Consensus 321 ~~~~~~~~~~~~~ 333 (358)
+.++..++..+..
T Consensus 248 ~~~i~~~~~~~~~ 260 (505)
T TIGR00898 248 AVSLPTFLFFLLS 260 (505)
T ss_pred HHHHHHHHHHHHH
Confidence 8888777766554
No 149
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.37 E-value=1.4e-11 Score=114.28 Aligned_cols=148 Identities=18% Similarity=0.253 Sum_probs=110.6
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHH-HHhcCCC-chhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQI-GESLGYP-TSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~G~s-~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
.+..++++.+|.++...++..........++|.+ .+++|++ ..+.+.+.++..+.+.+++++.|+++||++ +
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~ 272 (352)
T PF07690_consen 199 FKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFG------R 272 (352)
T ss_dssp CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------C
T ss_pred cccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------c
Confidence 4556667777755555555555666788899988 5677999 788888999999999999999999999984 3
Q ss_pred HHHHHHHHHHHHHHHHHHH----hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHh
Q 018271 215 PSFIAITLATMSVGHIVVA----SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 290 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~----~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~g 290 (358)
+...........+..+.+. ..+....++..++.|++.+...+....++.|.+|++++|+..|+.+....+|+. +|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~-ig 351 (352)
T PF07690_consen 273 RRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGI-IG 351 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 3333333333333333322 223345566778889988888899999999999999999999999999999984 67
Q ss_pred H
Q 018271 291 V 291 (358)
Q Consensus 291 p 291 (358)
|
T Consensus 352 P 352 (352)
T PF07690_consen 352 P 352 (352)
T ss_dssp H
T ss_pred C
Confidence 6
No 150
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.37 E-value=6.5e-11 Score=115.23 Aligned_cols=157 Identities=17% Similarity=0.097 Sum_probs=126.3
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.+.++++.++...+..++.....+....++|.+.++ .|++..++++......++..++.++.|++.||+ +||+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~------~~~~ 322 (485)
T TIGR00711 249 LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI------DPRK 322 (485)
T ss_pred HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------CcHH
Confidence 467888888888777777777777788889999886 599999999999999999999999999999999 6666
Q ss_pred HHHHHHHHHHHHHHHHH-h--c--CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhH
Q 018271 217 FIAITLATMSVGHIVVA-S--G--FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 291 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~--~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp 291 (358)
.+.++..+.+++..++. . . +........++.|++.+..+........+..|++++|++.|+.+....+|+. +|+
T Consensus 323 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-ig~ 401 (485)
T TIGR00711 323 LVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGS-IGT 401 (485)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHH-HHH
Confidence 67777776666666554 1 1 2233455677888888877766667777889999999999999999999995 799
Q ss_pred HHHHHHHhhc
Q 018271 292 RIIGYIYDNV 301 (358)
Q Consensus 292 ~i~g~l~~~~ 301 (358)
.+.|.+.++.
T Consensus 402 ~i~g~~~~~~ 411 (485)
T TIGR00711 402 ALITTILTNR 411 (485)
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 151
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.37 E-value=5.8e-12 Score=109.70 Aligned_cols=153 Identities=14% Similarity=0.066 Sum_probs=118.4
Q ss_pred chhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHH-H
Q 018271 143 TLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIA-I 220 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~-~ 220 (358)
.+.+|++...+++...+.+.++..-|.+.+ .+|+|+..++.+.+.....+.+..++.|.++||+| ++...+ .
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G------~n~~wv~~ 336 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYG------FNLWWVAS 336 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhc------ceehhHHH
Confidence 478999999999988888888888887766 55999999999988888888888999999999994 443333 3
Q ss_pred HHHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhh
Q 018271 221 TLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN 300 (358)
Q Consensus 221 ~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~ 300 (358)
+.+....+...+.. +.+.-+....+.|+.+...-...+..++.+.|.++.||++|+.....++|-. +-|+++|.+.|+
T Consensus 337 a~~~tl~~H~~l~F-t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla-~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 337 ACILTLLGHSGLFF-TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLA-FIPIIAGFIADG 414 (459)
T ss_pred HHHHHHHHhhhHHh-hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhh-HHhhhhheeecC
Confidence 33444444444432 2233456677788877766555777788888889999999999999999985 679999999998
Q ss_pred ccC
Q 018271 301 VAS 303 (358)
Q Consensus 301 ~g~ 303 (358)
.|+
T Consensus 415 ~g~ 417 (459)
T KOG4686|consen 415 DGS 417 (459)
T ss_pred CCc
Confidence 775
No 152
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.36 E-value=2.7e-11 Score=113.29 Aligned_cols=151 Identities=15% Similarity=0.126 Sum_probs=119.7
Q ss_pred hhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhcCchhH
Q 018271 161 LATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNL 240 (358)
Q Consensus 161 ~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~~~~~l 240 (358)
..+...+|.+.+++|++.++.++..+...++..++.++.|+++||+ +||+.+.++.++.+++.++...++...+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~------g~r~~~~~~~~~~~~~~~~~~~~~~~~l 90 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF------GEERSVAAGLLLIAAGILIRSAPGTALL 90 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh------CchHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3456688999999999999999999999999999999999999999 5556666666665555554434555667
Q ss_pred HHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHH
Q 018271 241 YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFL 320 (358)
Q Consensus 241 ~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~ 320 (358)
++.+++.|++.+...+..+.++.|.++ ++|+++.|+.+.+..+|.. ++|.+.+.+.+..+. .|+..|.
T Consensus 91 ~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-i~~~~~~~l~~~~~~----------~w~~~f~ 158 (355)
T TIGR00896 91 FAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAA-LAAAATVPLAQHSGG----------HWQQALA 158 (355)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhh----------hHHHHHH
Confidence 778888999888877777888888886 6899999999999999984 788888888776431 1888888
Q ss_pred HHHHHHHHH
Q 018271 321 IMASVAFVG 329 (358)
Q Consensus 321 ~~~~~~~~~ 329 (358)
+.+++.++.
T Consensus 159 ~~~~~~~~~ 167 (355)
T TIGR00896 159 WWALPALLA 167 (355)
T ss_pred HHHHHHHHH
Confidence 776654443
No 153
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.36 E-value=2.3e-10 Score=112.06 Aligned_cols=156 Identities=8% Similarity=-0.063 Sum_probs=124.8
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.+.+|++.++...+..++.....++...++|.+.+. +|+++.+++.......++..++.++.|++.||+ ++|.
T Consensus 253 ~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~------g~~~ 326 (495)
T PRK14995 253 MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL------GLRL 326 (495)
T ss_pred HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CchH
Confidence 567888888877777777776777777888988875 699999999999999999999999999999999 5556
Q ss_pred HHHHHHHHHHHHHHHHH-h---cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 217 FIAITLATMSVGHIVVA-S---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
.+..+.++.+++.+++. . .+....+...++.|++.|...+.....+.+..|++++|.+.++.+....+|+. +|+.
T Consensus 327 ~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~-~G~a 405 (495)
T PRK14995 327 VATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAG-LGIA 405 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHH-HHHH
Confidence 66666666666555443 1 22334556678889998887777777888889999999999999999999984 7898
Q ss_pred HHHHHHhh
Q 018271 293 IIGYIYDN 300 (358)
Q Consensus 293 i~g~l~~~ 300 (358)
+.|.+++.
T Consensus 406 i~g~i~~~ 413 (495)
T PRK14995 406 IFGLLLSR 413 (495)
T ss_pred HHHHHHHH
Confidence 99988764
No 154
>PRK10133 L-fucose transporter; Provisional
Probab=99.36 E-value=7e-11 Score=113.76 Aligned_cols=147 Identities=13% Similarity=0.033 Sum_probs=120.8
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
.++.+.+.++............+|.+.+++|.+..+.++..+.+.++..++.++.|+++||+ |||+.+..+..+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~------G~r~~l~~g~~~ 100 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL------SYKAGIITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CcHHHHHHHHHH
Confidence 45556666666666666777789999889999999999999999999999999999999999 777888888888
Q ss_pred HHHHHHHH---H-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHH
Q 018271 225 MSVGHIVV---A-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIY 298 (358)
Q Consensus 225 ~~~~~~l~---~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~ 298 (358)
.+++.+++ . .++...+++.+++.|++.+......+.++.|..+.++++...++.+....+|.. ++|.+++.+.
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~-~g~~~g~~l~ 177 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAI-IAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 88887664 2 355667888899999999999888899988876666666688999888889984 7888777654
No 155
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.36 E-value=2.9e-12 Score=116.63 Aligned_cols=149 Identities=17% Similarity=0.152 Sum_probs=133.5
Q ss_pred hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhh
Q 018271 173 SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCY 251 (358)
Q Consensus 173 ~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~ 251 (358)
+++-+.++.++++....+.+.+..++.|.+.||+ |++..+.+++.++....++++ ..++..+++.+.++|++.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i------Gy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgs 173 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI------GYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGS 173 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh------ccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhH
Confidence 3466678899999999999999999999999999 777889999999999999988 567788999999999999
Q ss_pred hcccccHHHHHHHhhCCcc-hHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHH
Q 018271 252 GCQWSLMPTITYEIFGVGH-MGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 252 g~~~~~~~~~~~e~f~~~~-~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~ 330 (358)
+..+....++++|.||.++ ||+++|+...+.++|. ++||+.+|.+||..| +...|.++++++++..
T Consensus 174 A~~~tsglamlAd~f~~d~er~~vmGialgfislG~-lvgPpfGGilYe~~G------------k~aPFlVL~~v~Lld~ 240 (464)
T KOG3764|consen 174 AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGV-LVGPPFGGILYEFAG------------KSAPFLVLAIVLLLDG 240 (464)
T ss_pred HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccc-eecCCcccchHhhcC------------CcCcHHHHHHHHHHHH
Confidence 9999999999999999875 7999999999999999 589999999999998 9999999999999998
Q ss_pred HHHHHHHHHh
Q 018271 331 LVAFLLFIRT 340 (358)
Q Consensus 331 ~~~~~~~~~~ 340 (358)
.+.+++...+
T Consensus 241 ~L~l~vi~p~ 250 (464)
T KOG3764|consen 241 ALQLLVIEPT 250 (464)
T ss_pred HHHHheeCcc
Confidence 8776665443
No 156
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.36 E-value=2.2e-12 Score=129.27 Aligned_cols=166 Identities=14% Similarity=0.141 Sum_probs=126.7
Q ss_pred hHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhc------
Q 018271 162 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASG------ 235 (358)
Q Consensus 162 ~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~------ 235 (358)
.....++++.+++|+++++.+++.+.+.++..++.++.|++.||+ +|++++.++.++++++.++++.+
T Consensus 51 ~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~------~r~~~i~~g~ll~~lg~ll~alphf~~~~ 124 (633)
T TIGR00805 51 LVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL------HRPIVIGIGCAIMGLGSFLLSLPHFLSGR 124 (633)
T ss_pred HHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc------CcceEEEecHHHHHHHHHHHhChHHhcCC
Confidence 344567788889999999999999999999999999999999998 55566667777777777665421
Q ss_pred --------------------------------------------C--chhHHHHHHHHHhhhhcccccHHHHHHHhhCCc
Q 018271 236 --------------------------------------------F--PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVG 269 (358)
Q Consensus 236 --------------------------------------------~--~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~ 269 (358)
+ ...+++.+++.|++.+..+++..+++.|.+|++
T Consensus 125 y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~ 204 (633)
T TIGR00805 125 YSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSK 204 (633)
T ss_pred ccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCcc
Confidence 0 123567899999999999999999999999999
Q ss_pred chHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCC----CCccccc---c---chHHHHHHHHHHHHHHHHHHH
Q 018271 270 HMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE----GNSCNGT---H---CFMLSFLIMASVAFVGCLVAF 334 (358)
Q Consensus 270 ~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~----~~~~~g~---~---~~~~~f~~~~~~~~~~~~~~~ 334 (358)
+|+...|+.+.+..+|.. +|++++|++.+.+..-. +..-..+ + +|+..|++.+++.++.+++.+
T Consensus 205 ~~~~~~~i~~~~~~iG~~-lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~ 278 (633)
T TIGR00805 205 NSPLYIGILESIAVFGPA-FGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF 278 (633)
T ss_pred ccHHHHHHHHHHHHhhhH-HHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999994 89999999886542100 0000111 1 266678887777777665433
No 157
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.35 E-value=6.7e-11 Score=115.53 Aligned_cols=180 Identities=11% Similarity=0.028 Sum_probs=131.4
Q ss_pred hhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHH
Q 018271 141 VCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAI 220 (358)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~ 220 (358)
.++++.+.++..++............+|.+.++.|.+.++.+.+ +...... ++.+++|.++||+.+.+.-.||..+..
T Consensus 9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 9 FQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHH
Confidence 34555666666666666666677778999999999998888886 3333332 689999999999833221023445666
Q ss_pred HHHHHHHHHHHHH-h---cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHH
Q 018271 221 TLATMSVGHIVVA-S---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGY 296 (358)
Q Consensus 221 ~~~~~~~~~~l~~-~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~ 296 (358)
+.+..+++..+++ . .+.+.+.+..++.+++.+.......++..|.+|+++|+++.++...+..+|. ++++.+.++
T Consensus 87 ~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~-llg~~l~~~ 165 (491)
T PRK11010 87 TQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAM-LVSGGLALW 165 (491)
T ss_pred HHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 6666666655544 2 2334566677788888887778888999999999999999999999999998 488889999
Q ss_pred HHhh-ccCCCCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 018271 297 IYDN-VASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 297 l~~~-~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
+.++ .| |+..|++.+++.++..+..++
T Consensus 166 l~~~~~G------------Wr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 166 LADRYLG------------WQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHhcccC------------HHHHHHHHHHHHHHHHHHHHh
Confidence 8884 45 999999999887776554443
No 158
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.35 E-value=4.3e-10 Score=105.83 Aligned_cols=151 Identities=11% Similarity=-0.016 Sum_probs=94.9
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.++.++++.++...+..++.....+.+..+.|.+.. ..|++..+.+.+.+...++..+++++.|++.||+ +||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~------g~~ 260 (377)
T PRK11102 187 FASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV------GAL 260 (377)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CHH
Confidence 456677888777666666555555666667776655 4699999999999999999999999999999999 555
Q ss_pred HHHHHHHHHHHHHH---HHHH-hc-CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHh-hhHHHHH
Q 018271 216 SFIAITLATMSVGH---IVVA-SG-FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIAS-PVGSYVC 289 (358)
Q Consensus 216 ~~~~~~~~~~~~~~---~l~~-~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~-~ig~~i~ 289 (358)
..+..+..+..+.. +... .. +.+...+...+.+.+.+.........+.|..| +.+|+..++.+... .+|+ +.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~-~~ 338 (377)
T PRK11102 261 NMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGA-IV 338 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHH-HH
Confidence 55555544332222 2221 11 22223333333333333334444456677766 78899998876543 4455 45
Q ss_pred hHHHHH
Q 018271 290 SVRIIG 295 (358)
Q Consensus 290 gp~i~g 295 (358)
++++.+
T Consensus 339 g~~~~~ 344 (377)
T PRK11102 339 GALLSL 344 (377)
T ss_pred HHHHHh
Confidence 555433
No 159
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.35 E-value=4e-10 Score=106.78 Aligned_cols=152 Identities=12% Similarity=0.129 Sum_probs=91.8
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
++.++++.++...+...+.......+..+.|.+.+ ++|++..+.+.+.+...+++.+++++.+++.||+ +||.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~------g~~~ 270 (392)
T PRK10473 197 SESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF------KPRT 270 (392)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CHHH
Confidence 34567777766555444444444445556676655 5699998889889999999999999999999999 5556
Q ss_pred HHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcch-HHHHHHHHHHhhhHHHHHhHHHH
Q 018271 217 FIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHM-GTIFNTIAIASPVGSYVCSVRII 294 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~-g~~~g~~~~~~~ig~~i~gp~i~ 294 (358)
.+.++..+..++.+++. .......+....+.+.+.+..++. ....+..|.+++ |.+.++ ..++. ..++.++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~g~~~~~----~~~~~-~~g~~~~ 343 (392)
T PRK10473 271 LMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGV--AMSQALGPFSLRAGVASST----LGIAQ-VCGSSLW 343 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHhccCcccccHHHHH----HHHHH-HHHHHHH
Confidence 66666666555555444 222223333333434433333222 333445554444 334433 34444 2556677
Q ss_pred HHHHhhcc
Q 018271 295 GYIYDNVA 302 (358)
Q Consensus 295 g~l~~~~g 302 (358)
+++.++.|
T Consensus 344 ~~l~~~~g 351 (392)
T PRK10473 344 IWLAAVLG 351 (392)
T ss_pred HHHHHHhc
Confidence 77877776
No 160
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.35 E-value=4.1e-11 Score=114.12 Aligned_cols=166 Identities=12% Similarity=0.062 Sum_probs=121.1
Q ss_pred HHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHH
Q 018271 152 AMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIV 231 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l 231 (358)
.++............+|.++++.|+|.++.+++..+... .+..+++|+++||+..+..-.||.++.++..+.+++..+
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~ 84 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAA 84 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHH
Confidence 344444444556778999999999999999998666655 588999999999993211102344566666666655555
Q ss_pred HH-hc---CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhc-cCCCC
Q 018271 232 VA-SG---FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV-ASGEG 306 (358)
Q Consensus 232 ~~-~~---~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~-g~~~~ 306 (358)
+. .. +.+.+++..++.+++.....+...++++|.+|+++|+++.++...+..+|. ++++.+.+.+.+.. |
T Consensus 85 l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~-i~g~~l~~~l~~~~~g---- 159 (402)
T PRK11902 85 MAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAM-LVSGGLALWLADRVLG---- 159 (402)
T ss_pred HHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHH-HHHhHHHHHHHhcccC----
Confidence 44 22 233344455566766666777888999999999999999999999999998 47888888888864 5
Q ss_pred CccccccchHHHHHHHHHHHHHHHHH
Q 018271 307 NSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 307 ~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
|+..|++.+++.++..+.
T Consensus 160 --------w~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 160 --------WGNTYLLMAGLMLAGALT 177 (402)
T ss_pred --------HHHHHHHHHHHHHHHHHH
Confidence 999999988877665543
No 161
>PRK09848 glucuronide transporter; Provisional
Probab=99.35 E-value=4.6e-10 Score=108.48 Aligned_cols=159 Identities=10% Similarity=0.002 Sum_probs=116.7
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.+++++++.++...+..++.......+....|++.++ +|.+....++......++..++.++.++++||+ +++
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~------g~~ 294 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI------GKK 294 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CcH
Confidence 5678899999888887777777666677777777774 477655554444445677888999999999999 555
Q ss_pred HHHHHHHHHHHHHHHHHHh-c--CchhHHHHHHHHHhhhhcccccHHHHHHHhhCC-------cchHHHHHHHHHHhhhH
Q 018271 216 SFIAITLATMSVGHIVVAS-G--FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV-------GHMGTIFNTIAIASPVG 285 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~~-~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~-------~~~g~~~g~~~~~~~ig 285 (358)
..+.++.++.+++.+++.. . +.+.+++..++.|++.+...+...++.+|..+. +..|..+|+.+....+|
T Consensus 295 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 295 NTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 6666676666666555442 2 233444556778888888887778887777653 34699999999999999
Q ss_pred HHHHhHHHHHHHHhhcc
Q 018271 286 SYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 286 ~~i~gp~i~g~l~~~~g 302 (358)
.. +|+.+.|.+.+..|
T Consensus 375 ~a-ig~~i~g~~l~~~G 390 (448)
T PRK09848 375 QA-IGGSIPAFILGLSG 390 (448)
T ss_pred HH-HHHHHHHHHHHHcC
Confidence 95 79999999888765
No 162
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.35 E-value=5.9e-10 Score=106.45 Aligned_cols=174 Identities=10% Similarity=-0.003 Sum_probs=121.7
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc--CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL--GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
++.+|++.++...+..++..+......++++.+.++. +.+...++.+.+....+..+||++++++.||+ +++
T Consensus 226 ~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~------~~~ 299 (410)
T TIGR00885 226 SRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL------AAH 299 (410)
T ss_pred HHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CHH
Confidence 4567888888878788887777777788899998865 44444556667777788899999999999999 555
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHH
Q 018271 216 SFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 295 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g 295 (358)
+.+.++..+.++..++....+........++.|++.+..++...+...+..+++......++.... +|+. +.|++.|
T Consensus 300 ~~l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga-~~p~l~G 376 (410)
T TIGR00885 300 KVLMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGG-IVPPLQG 376 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccc-hHHHHHH
Confidence 556666666665555554332333456677888899999999999999999876654455554433 7775 6799999
Q ss_pred HHHhhccCCCCCccccccchHHHHHHHHHHH
Q 018271 296 YIYDNVASGEGNSCNGTHCFMLSFLIMASVA 326 (358)
Q Consensus 296 ~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~ 326 (358)
++.|..+... .| +++..|++...+.
T Consensus 377 ~~~d~~~~~~----~~--~~~~~~~~~~~~~ 401 (410)
T TIGR00885 377 FIIDMKEIAA----AP--AVNTSFILPLLCF 401 (410)
T ss_pred HHHHHhcccc----cC--ccchHHHHHHHHH
Confidence 9999652100 00 1777777654433
No 163
>PRK11043 putative transporter; Provisional
Probab=99.35 E-value=8.1e-10 Score=105.03 Aligned_cols=158 Identities=10% Similarity=0.039 Sum_probs=108.7
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
+.++.++++++|...+...+.....+.+..+.|.+.++.|++..+.++......++..+|+++.+++.||+++ +
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~------~ 268 (401)
T PRK11043 195 TFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGG------E 268 (401)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH------H
Confidence 3566778888876666555555555667788899988899999988888888888899999999999999853 3
Q ss_pred HHHHHHH---HHHHHHHHHHHh---cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHH
Q 018271 216 SFIAITL---ATMSVGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVC 289 (358)
Q Consensus 216 ~~~~~~~---~~~~~~~~l~~~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~ 289 (358)
....... .+..+...+... .+.....+...+.|++.+..++.......|.+| +++|++.|+.+.....++. .
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~-~ 346 (401)
T PRK11043 269 QLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCF-L 346 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHH-H
Confidence 3222222 222222222221 222333444566777777777777667667766 5789999999988777774 6
Q ss_pred hHHHHHHHHhhc
Q 018271 290 SVRIIGYIYDNV 301 (358)
Q Consensus 290 gp~i~g~l~~~~ 301 (358)
++.+.|.+.|..
T Consensus 347 ~~~~~g~l~~~~ 358 (401)
T PRK11043 347 ASLLVSALISTP 358 (401)
T ss_pred HHHHHHHccCCC
Confidence 788888887743
No 164
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.34 E-value=4.2e-11 Score=116.91 Aligned_cols=176 Identities=13% Similarity=0.092 Sum_probs=142.5
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
+..+|++.|..+|.+.++...+.......++.++.+..-|+...+++.+...+...+..++.|.++||+ .||++
T Consensus 4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~------drrri 77 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRF------DRRRI 77 (524)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------cchHH
Confidence 345789999999999999888888777778878777777888888888899999999999999999999 66666
Q ss_pred HHHHHHHHHHHHHHHH------hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhH
Q 018271 218 IAITLATMSVGHIVVA------SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 291 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~------~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp 291 (358)
++.+.++.++...++. ..+.+.+++..++.|++.....+...++++|+.|+++...+.++.++..+++. ++||
T Consensus 78 li~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar-~iGP 156 (524)
T PF05977_consen 78 LILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIAR-IIGP 156 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHH-hccc
Confidence 7666655544332221 23456677788899999888889999999999999999999999999999998 5899
Q ss_pred HHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 292 RIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 292 ~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
.++|.++...| ..++|.+.++..++..++
T Consensus 157 algG~Lva~~G------------~~~~f~inalsfl~~i~~ 185 (524)
T PF05977_consen 157 ALGGILVAFFG------------AAAAFLINALSFLISILA 185 (524)
T ss_pred hHHHHHHHHHH------------HHHHHHHHHHHHHHHHHH
Confidence 99999999887 778888887766665443
No 165
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.33 E-value=3.2e-11 Score=114.00 Aligned_cols=159 Identities=9% Similarity=-0.039 Sum_probs=115.7
Q ss_pred HHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHH
Q 018271 153 MLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVV 232 (358)
Q Consensus 153 ~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~ 232 (358)
+++...+...+...+|.+.+++|.|..+.++..++..+...++.+++|.++||++|++. .++.... ...... ....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~-~~~~~~~-~~~~~~--~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIP-ALRLLAL-LTLLFA--VAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHH-HHHHHHH-HHHHHH--HHHH
Confidence 33333444567778899999999999999999999999999999999999999965421 1222222 211111 1122
Q ss_pred H-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCcccc
Q 018271 233 A-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNG 311 (358)
Q Consensus 233 ~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g 311 (358)
. .++.+.+++.+++.|++.+...+...++..+. .++|+.++|.....+.+|. .+||+++|++.++.|
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~-~igp~lgg~l~~~~g--------- 156 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAF-VIGSALTGKLVSWFG--------- 156 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHH-HHHHHHHHHHHHHcC---------
Confidence 2 34556667778888888877777777777665 3567888888888888998 489999999999988
Q ss_pred ccchHHHHHHHHHHHHHHH
Q 018271 312 THCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 312 ~~~~~~~f~~~~~~~~~~~ 330 (358)
|+..|++.++..++..
T Consensus 157 ---~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 157 ---EQAILWILTAGVASML 172 (382)
T ss_pred ---hhHHHHHHHHHHHHHH
Confidence 9999988776544443
No 166
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.33 E-value=3.4e-11 Score=110.82 Aligned_cols=176 Identities=14% Similarity=0.099 Sum_probs=125.9
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
+.+|+-++.+.++....+.+....+.+.+++|+|..|.++++++..+.+.+.|+..|.+.||+| +|++ ..++.+
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfG-----gR~~-~~~s~~ 87 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFG-----GRKW-TILSML 87 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccC-----chHH-HHHHHH
Confidence 4555555555555444455555556666789999999999999999999999999999999996 5544 455555
Q ss_pred HHHHHHHHHH-h---cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHh
Q 018271 224 TMSVGHIVVA-S---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 299 (358)
Q Consensus 224 ~~~~~~~l~~-~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~ 299 (358)
+..+.++... . ++.+.+++..++.|++. +.++...+.++..||+|+.|++.|+.. .+++|.. +..+++..+..
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~a-v~q~~~P~v~~ 164 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVA-VAQLVAPLVAV 164 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhccc-ceehcccccccccCChhhhhHHHHHhc-cccccHH-HHHHHHHHHHH
Confidence 5555555444 2 23347788888888764 567888889999999999999999997 6666664 45555555555
Q ss_pred hccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 300 NVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 300 ~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
..+. ..|+.+..+..+..++.++..++..
T Consensus 165 ~~g~---------~~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 165 AFGF---------LAWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred HHhh---------HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4440 0178888888887777776666554
No 167
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.33 E-value=6.8e-11 Score=114.07 Aligned_cols=152 Identities=13% Similarity=0.064 Sum_probs=99.2
Q ss_pred ccccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcC
Q 018271 133 EDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 211 (358)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~ 211 (358)
+...+++.++++..|.+.++.++.....+++.+|+|.+.++ .|+|..+++.+.+.+.++++++.++.|+++||+. ..
T Consensus 262 ~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~--~~ 339 (495)
T KOG2533|consen 262 KWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK--TI 339 (495)
T ss_pred CHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh--hh
Confidence 44568899999999999999999999999999999999998 5799999999999999999999999999999952 00
Q ss_pred CchHHHHHHHHH-HHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcch-HHHHHHHHHHhhhHH
Q 018271 212 WERPSFIAITLA-TMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHM-GTIFNTIAIASPVGS 286 (358)
Q Consensus 212 ~gr~~~~~~~~~-~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~-g~~~g~~~~~~~ig~ 286 (358)
..++........ ...++.+.+. ................+.+...+......++....+.+ -+..+....+.+.++
T Consensus 340 ~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~ 417 (495)
T KOG2533|consen 340 FARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAG 417 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHH
Confidence 044554444433 3334434443 22232333323333333333444444555555544433 333333344444444
No 168
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.32 E-value=7.5e-11 Score=126.66 Aligned_cols=174 Identities=11% Similarity=0.083 Sum_probs=122.3
Q ss_pred HhhhchhHHHHHHHHHHhhhhhhhHHhcHHHH----H-HhcCCCc-hhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCC
Q 018271 139 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQI----G-ESLGYPT-SAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 212 (358)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-~~~G~s~-~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~ 212 (358)
.++++++++.+++..++.....+.....++.+ . .+.+.+. ...++..+++.+...+..+++|+++||+
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~------ 79 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY------ 79 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc------
Confidence 45677778777777777665544333222222 1 1222222 3456677788899999999999999999
Q ss_pred chHHHHHH---H-HHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHH
Q 018271 213 ERPSFIAI---T-LATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYV 288 (358)
Q Consensus 213 gr~~~~~~---~-~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i 288 (358)
+||+++.. . .+....+.+.+...+.+.+++.+++.|++.+...+...+++++++++++++.++|+.+++..+|. +
T Consensus 80 ~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~-~ 158 (1140)
T PRK06814 80 DKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAI-L 158 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHH-H
Confidence 45444321 1 11122222222246677888999999999999999999999999999999999999999999999 5
Q ss_pred HhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHH
Q 018271 289 CSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 331 (358)
Q Consensus 289 ~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~ 331 (358)
+||+++|++.+..+ |++.|...+.+.+++.+
T Consensus 159 igp~l~g~l~~~~~------------~~~~~~~~~~~~~~~~~ 189 (1140)
T PRK06814 159 LGTIIGGLATISGN------------FVILVALLMGIAVLGWL 189 (1140)
T ss_pred HHHHHHHHHHhccc------------cHHHHHHHHHHHHHHHH
Confidence 89999999999776 98888544444444443
No 169
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.31 E-value=6.6e-12 Score=116.22 Aligned_cols=182 Identities=17% Similarity=0.037 Sum_probs=129.4
Q ss_pred HHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHH--------HHHHHH-HHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 146 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINS--------LVSLWS-IWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~--------~~~~~~-i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
........|+...+.|....+...+.+..|+.+.+... .-.+.. .+.+.|..+...++|++ ||++
T Consensus 306 Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i------GRk~ 379 (538)
T KOG0252|consen 306 LLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII------GRKY 379 (538)
T ss_pred HHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh------hhHH
Confidence 33445556677777888888888999988877655433 112222 33444888889999999 8888
Q ss_pred HHHHHHHHHHHHHHHHH-hcC-c---hhHHH-HHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHh
Q 018271 217 FIAITLATMSVGHIVVA-SGF-P---GNLYV-GSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 290 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~~~-~---~~l~~-~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~g 290 (358)
..+.+++++++..+.++ ..+ . ..+.+ ..+.+-++.-+..+....+.+|.||++.||+.+|+....+.+|+ ++|
T Consensus 380 iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GA-ivg 458 (538)
T KOG0252|consen 380 IQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGA-IVG 458 (538)
T ss_pred HHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchH-HHH
Confidence 89999999998888776 322 1 12222 22223334444455556778999999999999999999999999 578
Q ss_pred HHHHHHHHh-----hccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 018271 291 VRIIGYIYD-----NVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQV 347 (358)
Q Consensus 291 p~i~g~l~~-----~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (358)
...++++.+ ..+ .+.+|++++++++++.+..+++ +|++++..+.
T Consensus 459 ~~~F~~~t~~~yp~~~g------------~~~v~~i~~~~~~~gi~~T~l~-pEtk~~~lee 507 (538)
T KOG0252|consen 459 AFGFLYLTDHNYPPNIG------------VRNVFIILAGCMLLGILFTLLI-PETKGKSLEE 507 (538)
T ss_pred HHHhhHhhhccCCcccc------------chHHHHHHHHHHHHhHheeEEe-ecccccCHHH
Confidence 888888877 333 8999999999999998665444 4877765443
No 170
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.30 E-value=9.2e-10 Score=104.55 Aligned_cols=176 Identities=11% Similarity=-0.016 Sum_probs=114.6
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
+.+++++.+.......++...........+|.+.+ .+|+++.+.+++.+...++..+|.++.+++.||. +++.
T Consensus 199 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~------~~~~ 272 (393)
T PRK11195 199 RVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE------TVLR 272 (393)
T ss_pred HHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC------cccc
Confidence 45566666554443333333333444455566665 4699999999999999999999999999998876 3333
Q ss_pred HHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcc-hHHHHHHHHHHhhhHHHHHhHHHH
Q 018271 217 FIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGH-MGTIFNTIAIASPVGSYVCSVRII 294 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~-~g~~~g~~~~~~~ig~~i~gp~i~ 294 (358)
.+..+.. .++..+++. .++.+...+..++.|++.+.......+.+.+.-|++. +|++.++.++...++.. ++..+.
T Consensus 273 ~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~-~~~~~~ 350 (393)
T PRK11195 273 VLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAML-LMLGLY 350 (393)
T ss_pred hHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHH-HHHHHH
Confidence 4444432 233333333 3334444556667888877766667777777655444 79999999999999984 778777
Q ss_pred HHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHH
Q 018271 295 GYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 334 (358)
Q Consensus 295 g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~ 334 (358)
+.+ +..| -+..+++.+...++++.+..
T Consensus 351 ~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 351 SLL-VKLG------------VPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HHH-HHcC------------CCHHHHHHHHHHHHHHHHHH
Confidence 755 5666 66676666665555554443
No 171
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.28 E-value=1.2e-10 Score=125.17 Aligned_cols=155 Identities=10% Similarity=0.097 Sum_probs=116.5
Q ss_pred HhhhchhHHHHHHHHHHhhhhhhhHHhcH-HHHHHhcCCCc--hhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 139 QSVCTLNFWLLFVAMLCGMGSGLATVNNI-SQIGESLGYPT--SAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~G~s~--~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
..++++.++.+++..++......+....+ +.+..+++.+. ...+++.+++.++..++.+++|+++||+ +||
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~------grk 77 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF------SKN 77 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc------cHH
Confidence 34667788877777777655544433333 33444555543 3457778899999999999999999999 666
Q ss_pred HHHHHHHHHHHHHHHHH---H-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhH
Q 018271 216 SFIAITLATMSVGHIVV---A-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 291 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~---~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp 291 (358)
+++..+.++.++..++. . ..+.+.+++.+++.|++.+...+...++++|++|+++|+.++|+...+..+|. ++||
T Consensus 78 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~-~lg~ 156 (1146)
T PRK08633 78 RVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAI-LAGT 156 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHH-HHHH
Confidence 66666655444333322 2 34566778889999999998888999999999999999999999999999999 5899
Q ss_pred HHHHHHHhh
Q 018271 292 RIIGYIYDN 300 (358)
Q Consensus 292 ~i~g~l~~~ 300 (358)
+++|++.+.
T Consensus 157 ~l~~~l~~~ 165 (1146)
T PRK08633 157 ALFSFLFES 165 (1146)
T ss_pred HHHHHHHHh
Confidence 999999876
No 172
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.28 E-value=3.7e-15 Score=143.86 Aligned_cols=263 Identities=13% Similarity=0.084 Sum_probs=147.8
Q ss_pred chhHHHHHHHHHHHHHhhhhHHhhhhhhhccccCCCCcccCCCCCCCCCCCcccccccCCCCcccccCCCCCccchhhhh
Q 018271 45 PLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEF 124 (358)
Q Consensus 45 ~~~~~~~~~~~~~~ll~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (358)
+|+...+..++.++.++....+||+|+|+..+++.++ .++.+.+...++ ..+ ++.++..++
T Consensus 170 Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~----A~~~l~~~~~~~----~~~---~~~~~~~~~-------- 230 (451)
T PF00083_consen 170 WRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEE----AEKVLRKLRGKE----IED---EEIEEIKAE-------- 230 (451)
T ss_pred ccccccccccccccccccccccccccceecccccccc----cccccccccccc----ccc---ccccccccc--------
Confidence 4666666666666677777889999999977665442 222222211110 000 000000000
Q ss_pred ccccccccccccHHHhhhchh----HHHHHHHHHHh-hhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHh
Q 018271 125 DDKKLKDEEDMNILQSVCTLN----FWLLFVAMLCG-MGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGG 199 (358)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~ 199 (358)
.++. .+.+.++++.++++. +........+. .........+.+.+.+..|.+.. ........+...++.++.
T Consensus 231 -~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 306 (451)
T PF00083_consen 231 -KKES-QESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLA 306 (451)
T ss_pred -cccc-cccceeeeeccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccc
Confidence 0000 000123344444422 22222222222 22223445566777777787766 233345556677788888
Q ss_pred HHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-----h-cC----chhHHHHHHHHHhhhh-cccccHHHHHHHhhCC
Q 018271 200 GYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-----S-GF----PGNLYVGSIIVGVCYG-CQWSLMPTITYEIFGV 268 (358)
Q Consensus 200 G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-----~-~~----~~~l~~~~~l~g~~~g-~~~~~~~~~~~e~f~~ 268 (358)
.++.||+ |||..+..+..+.+++.+.+. . .+ ....++...+..++.+ +..+..+.+.+|+||+
T Consensus 307 ~~~~~~~------GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt 380 (451)
T PF00083_consen 307 IFLIDRF------GRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPT 380 (451)
T ss_pred ccccccc------ccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccc
Confidence 8999999 566556666555555444331 1 11 1112222222222333 3345566888999999
Q ss_pred cchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 018271 269 GHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVV 348 (358)
Q Consensus 269 ~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (358)
+.|+++.|+....+.++++ ++|.+...+.+..+ ....+.+.+++++++.+..+++.+|+|++..++.
T Consensus 381 ~~R~~~~~~~~~~~~i~~~-i~~~~~~~~~~~~~------------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei 447 (451)
T PF00083_consen 381 KVRSTGIGLSYAVGRIGGF-IIPFLFPYLFNNLG------------GWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEI 447 (451)
T ss_pred ccccccccccccccccccc-cccccccccccccc------------ccccchhhHHHHHHHHhheeEEEeeCCCCCHHHH
Confidence 9999999999999999885 67877777776654 2456667777777777777777889988765544
Q ss_pred H
Q 018271 349 L 349 (358)
Q Consensus 349 ~ 349 (358)
.
T Consensus 448 ~ 448 (451)
T PF00083_consen 448 Q 448 (451)
T ss_pred H
Confidence 3
No 173
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.27 E-value=6e-10 Score=108.89 Aligned_cols=179 Identities=12% Similarity=0.084 Sum_probs=131.4
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.+...+++....+.+..++.......+...+|.+.++ +|.++...|++.+..++|+++|.++.+++.+|+ ++.
T Consensus 211 ~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~------~~~ 284 (524)
T PF05977_consen 211 LRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL------SSR 284 (524)
T ss_pred HHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc------Ccc
Confidence 3444455655544443333333333455568888864 588999999999999999999999999888777 444
Q ss_pred HHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHH
Q 018271 216 SFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRII 294 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~ 294 (358)
.++..+.+..+++++.++ ..+.+...+..++.|++.........+.+.+..|.+.||+.+++..+....+. .+|..+.
T Consensus 285 ~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~-~lGsll~ 363 (524)
T PF05977_consen 285 RLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGM-PLGSLLW 363 (524)
T ss_pred hhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHH-HHHHHHH
Confidence 556666666777666666 44555566677888888887777778888899999999999999987777666 4788999
Q ss_pred HHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHH
Q 018271 295 GYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 334 (358)
Q Consensus 295 g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~ 334 (358)
|.+.+..| .+.++.+.++..+++.++..
T Consensus 364 G~la~~~g------------~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 364 GFLADHFG------------VRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHhC------------HHHHHHHHHHHHHHHHHHHH
Confidence 99999988 77888777766666555443
No 174
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.26 E-value=2e-10 Score=107.43 Aligned_cols=169 Identities=13% Similarity=0.020 Sum_probs=117.9
Q ss_pred hHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH-HHHHHHHHHHHHHHHHH-hc---C
Q 018271 162 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS-FIAITLATMSVGHIVVA-SG---F 236 (358)
Q Consensus 162 ~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~-~~~~~~~~~~~~~~l~~-~~---~ 236 (358)
.....+|.+.++.|+|.++.+++.+. .+...+ .+++|+++||+..|+. |||+ ++..+.++.++...++. .. +
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~-Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFF-GRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCC-CccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 34557889999999999999888655 444444 8999999999854332 5555 45556666665554444 22 2
Q ss_pred chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchH
Q 018271 237 PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFM 316 (358)
Q Consensus 237 ~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~ 316 (358)
.+.+....++.+++.+...+...++++|.+|+++|+.+.|+...+..+|. +++|.+++.+.+..+... ...++|+
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~l~~~l~~~~g~~~----~~~~~wr 157 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGM-LLSGSLALVLASPEFANT----GLITLWG 157 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHH-HHHHHHHHHHhhhccccc----ccccccH
Confidence 22344444556666666667778899999999999999999999999998 478999998887765210 1233499
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 018271 317 LSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 317 ~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
..|++.+++.+++.+..++..+
T Consensus 158 ~~f~i~ai~~l~~~~~~~~~~~ 179 (356)
T TIGR00901 158 YIFFWTALLILPGLLVTLFLAK 179 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 9999888877776654443333
No 175
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.26 E-value=2.5e-09 Score=98.11 Aligned_cols=158 Identities=15% Similarity=0.140 Sum_probs=119.6
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
...++++++.++.-.++.|++.+.....-+|++.|+.+ .|.+..+++.+++.+..+.++||+++.++..|+ ..
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~------~~ 301 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI------KP 301 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CH
Confidence 46788999999999999999999999999999999998 799999999999999999999999999999988 33
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHH
Q 018271 215 PSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRII 294 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~ 294 (358)
.+.+....++..+.++.....+....+...++.|++++..++...+...+..| ++-..+.++.-++ .+|+. +-|++.
T Consensus 302 ~k~Laf~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~ma-ivGGA-iiP~l~ 378 (422)
T COG0738 302 EKYLAFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVMA-IVGGA-IIPPLQ 378 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeeeh-eecch-HHHHHH
Confidence 33444443333333333332222334456678899999999999999999998 4444444444333 34554 459999
Q ss_pred HHHHhhcc
Q 018271 295 GYIYDNVA 302 (358)
Q Consensus 295 g~l~~~~g 302 (358)
|++.|+.|
T Consensus 379 G~i~d~~g 386 (422)
T COG0738 379 GVIADMFG 386 (422)
T ss_pred HHHHHhhh
Confidence 99999987
No 176
>PRK09669 putative symporter YagG; Provisional
Probab=99.25 E-value=4.5e-09 Score=101.43 Aligned_cols=160 Identities=9% Similarity=0.052 Sum_probs=107.1
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
..++.+||+.++.+.+..++.............++.+..--+....+.+.....+..+++.+++++++||+ +++
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~------gk~ 294 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKF------DRV 294 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------ChH
Confidence 45677899998888777666544443333333444443321233334455566678889999999999999 444
Q ss_pred HHHHHHHHHHHHHHH-HHH--hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhC-------CcchHHHHHHHHHHhhhH
Q 018271 216 SFIAITLATMSVGHI-VVA--SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFG-------VGHMGTIFNTIAIASPVG 285 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~-l~~--~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-------~~~~g~~~g~~~~~~~ig 285 (358)
..+..+.++.++..+ ++. ..+...+++..++.|++.+...++.+++++|..+ .+..|..+|+.+....+|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg 374 (444)
T PRK09669 295 RAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLG 374 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHH
Confidence 545544443333222 222 2233445666778899999888888999988864 344577889999999999
Q ss_pred HHHHhHHHHHHHHhhcc
Q 018271 286 SYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 286 ~~i~gp~i~g~l~~~~g 302 (358)
.. +||.+.|.+++..|
T Consensus 375 ~a-lg~~i~g~ll~~~G 390 (444)
T PRK09669 375 LA-IGGAVVGWILAWVD 390 (444)
T ss_pred HH-HHHHHHHHHHHHcC
Confidence 95 89999999998776
No 177
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.25 E-value=3.8e-10 Score=105.62 Aligned_cols=142 Identities=16% Similarity=0.160 Sum_probs=101.3
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.++.++++++|.+.+..++.....+.+..++|.+.++ +|++..+++.+.++..+.+.+++++.|+++||+++ |
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~------~ 291 (366)
T TIGR00886 218 QLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGG------A 291 (366)
T ss_pred HHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhcc------c
Confidence 4567788889988888777777777788889988875 59999999999999999999999999999999953 3
Q ss_pred HHHHHHHHHHHHHHHHHH--hc---CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhH
Q 018271 216 SFIAITLATMSVGHIVVA--SG---FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVG 285 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~--~~---~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig 285 (358)
..+..+....+.+..++. .. +....++...+.+++.|...+...+++++.+| +++|+.+|+.+..+.+|
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 292 RKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 333333333333333322 22 22333334444555555556667778888887 68999999998887765
No 178
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.25 E-value=2.7e-09 Score=102.47 Aligned_cols=159 Identities=14% Similarity=0.169 Sum_probs=126.6
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc-CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
..++.++++.++.++...++............+++.++. |.+ ...+.+..+..+++.++.+++++++||+ ++
T Consensus 217 ~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~------gk 289 (428)
T PF13347_consen 217 SLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF------GK 289 (428)
T ss_pred chhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc------cc
Confidence 467788899999888888888777777777778888764 555 5567777888999999999999999999 44
Q ss_pred HHHHHHHHHHHHHHHHHHH-h--cCchhHHHHHHHHHhhhhcccccHHHHHHHhhC-------CcchHHHHHHHHHHhhh
Q 018271 215 PSFIAITLATMSVGHIVVA-S--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFG-------VGHMGTIFNTIAIASPV 284 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~-~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-------~~~~g~~~g~~~~~~~i 284 (358)
+..+..+.++.+++.+++. . .+.+.+++..++.|++.+..+...+++.+|..+ .+..|..+|+.+....+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~ 369 (428)
T PF13347_consen 290 KKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI 369 (428)
T ss_pred eeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH
Confidence 4556667777776666554 3 466778888899999999999888999888765 34568999999999999
Q ss_pred HHHHHhHHHHHHHHhhcc
Q 018271 285 GSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 285 g~~i~gp~i~g~l~~~~g 302 (358)
+.. +++.+.|.+.+..|
T Consensus 370 ~~~-la~~i~g~~l~~~G 386 (428)
T PF13347_consen 370 GQG-LAGAIVGLLLALVG 386 (428)
T ss_pred HHH-HHHHHHHHHHHHhC
Confidence 995 78889998888766
No 179
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.23 E-value=2.2e-10 Score=107.87 Aligned_cols=176 Identities=22% Similarity=0.281 Sum_probs=147.7
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcC----CCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGE-SLG----YPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 218 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G----~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~ 218 (358)
+.+|.++..-+.=-+++|++-..+-.|+. +.+ +|++++..+.+.+...--...+++||++||+- |++..+
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~L-----G~~~tI 95 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVL-----GTRRTI 95 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhc-----chhHHH
Confidence 46677777777778888888887776665 445 99999888888888777778999999999984 889999
Q ss_pred HHHHHHHHHHHHHHHhc---CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCc--chHHHHHHHHHHhhhHHHHHhHHH
Q 018271 219 AITLATMSVGHIVVASG---FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVG--HMGTIFNTIAIASPVGSYVCSVRI 293 (358)
Q Consensus 219 ~~~~~~~~~~~~l~~~~---~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~--~~g~~~g~~~~~~~ig~~i~gp~i 293 (358)
..+.+++++++++++.. .+..+++...+.++|.|..=+....+++|+||++ +|-.++++..++.++|++ ++|++
T Consensus 96 ~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl-~~p~i 174 (498)
T COG3104 96 VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSL-IAPII 174 (498)
T ss_pred HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHH-HHHHH
Confidence 99999999999998833 4677888889999999999899999999999976 366778888899999994 89999
Q ss_pred HHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 294 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 294 ~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
.+++.+++| |...|...++-+.++.+..++.+
T Consensus 175 ~~~~~~~~g------------~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 175 TGLLAINYG------------WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHhhC------------HHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999998 99999999998888876654443
No 180
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.23 E-value=4.2e-10 Score=110.59 Aligned_cols=141 Identities=20% Similarity=0.239 Sum_probs=116.9
Q ss_pred hhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccH
Q 018271 180 AINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLM 258 (358)
Q Consensus 180 ~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~ 258 (358)
+.+++.+...+++.+|.++.|+++|++ |||..+.++.++..++.++.+ ..+...+++++++.|++.|+...+.
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~------GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~ 163 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI------GRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLA 163 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcc
Confidence 348999999999999999999999999 788889999999999888887 6778889999999999999999999
Q ss_pred HHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 259 PTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 259 ~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
+.+++|+-|++.||...+.......+|.. ++ .+.|...+... ..||..+.+..+.+++.++. .++.+
T Consensus 164 piy~sEiap~~~RG~l~~~~~l~~~~Gi~-~~-~~~~~~~~~~~----------~~Wr~~~~~~~i~~~~~~~~-~~~~p 230 (513)
T KOG0254|consen 164 PVYISEIAPAHIRGTLVSLYQLFITIGIL-LG-YCINYGTSKVY----------AGWRIPLGLALIPAVILALG-MLFLP 230 (513)
T ss_pred hhhHhhcCChhhhHHHHHHHHHHHHHHHH-HH-HHHhhhhccCC----------ccHHHHHHHHHHHHHHHHHH-HHhCC
Confidence 99999999999999999999988887774 55 56666554430 11998888887777777766 44443
Q ss_pred H
Q 018271 339 R 339 (358)
Q Consensus 339 ~ 339 (358)
+
T Consensus 231 e 231 (513)
T KOG0254|consen 231 E 231 (513)
T ss_pred C
Confidence 3
No 181
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.23 E-value=3e-10 Score=109.34 Aligned_cols=189 Identities=14% Similarity=0.037 Sum_probs=124.8
Q ss_pred HHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH-HHHHHHHHH
Q 018271 149 LFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI-AITLATMSV 227 (358)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~-~~~~~~~~~ 227 (358)
+....+...+.+.....+++.|.+++|.+....+++..+..+.+.+..++.|+++||...|. |||+.+ ..+.....+
T Consensus 9 ~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~--GRRrp~il~g~~~~~~ 86 (477)
T TIGR01301 9 VASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF--GRRRPFIAAGAALVAF 86 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC--CChHHHHHHHHHHHHH
Confidence 33344444555556677788899999999999999999999999999999999999632221 444444 434555555
Q ss_pred HHHHHH-hcCc-----------------hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcch--HHHHHHHHHHhhhHHH
Q 018271 228 GHIVVA-SGFP-----------------GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHM--GTIFNTIAIASPVGSY 287 (358)
Q Consensus 228 ~~~l~~-~~~~-----------------~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~--g~~~g~~~~~~~ig~~ 287 (358)
+++++. ..+. ...++...+..++....++...++++|.+|+++| +.++++.+....+|+
T Consensus 87 ~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~- 165 (477)
T TIGR01301 87 AVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN- 165 (477)
T ss_pred HHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH-
Confidence 555544 2221 1112223344456666777788999999998865 678999999999999
Q ss_pred HHhHHHHHHH--HhhccCCC-CCccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018271 288 VCSVRIIGYI--YDNVASGE-GNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRT 340 (358)
Q Consensus 288 i~gp~i~g~l--~~~~g~~~-~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 340 (358)
++|+.+++.. .+..+-.. +..+.-...++..|++.+++.+++.++..+..+|.
T Consensus 166 ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 166 VLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 5888777764 22211100 01111122389999998888888887766655554
No 182
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.23 E-value=1.3e-08 Score=99.06 Aligned_cols=159 Identities=9% Similarity=-0.057 Sum_probs=109.9
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.+..++|+.++.+.+..++............+++.+...-+....+.+.+...++.+++.+++++++||+ ++|.
T Consensus 224 ~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~------gkk~ 297 (473)
T PRK10429 224 VALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSL------SRRI 297 (473)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CcHH
Confidence 4456688888877777776666555555555566554433445556666777788899999999999999 5555
Q ss_pred HHHHHHHHHHHHHHHHH------hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhC-------CcchHHHHHHHHHHhh
Q 018271 217 FIAITLATMSVGHIVVA------SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFG-------VGHMGTIFNTIAIASP 283 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~------~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-------~~~~g~~~g~~~~~~~ 283 (358)
.+.++..+.+++.+.+. ..+...+++..++.|++.+..+...+++++|..+ .+..|..+|..+....
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K 377 (473)
T PRK10429 298 LWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVK 377 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHH
Confidence 55555444443333221 1223344556677888888888888888888833 4446778899999999
Q ss_pred hHHHHHhHHHHHHHHhhcc
Q 018271 284 VGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 284 ig~~i~gp~i~g~l~~~~g 302 (358)
+|.. +++.+.|.+.+..|
T Consensus 378 ~~~a-l~~~i~g~~l~~~G 395 (473)
T PRK10429 378 GGSA-FAAFFIGVVLGLIG 395 (473)
T ss_pred HHHH-HHHHHHHHHHHHcC
Confidence 9995 78999999998765
No 183
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.23 E-value=2.1e-10 Score=110.25 Aligned_cols=147 Identities=15% Similarity=0.221 Sum_probs=125.5
Q ss_pred hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH---hcCchhHHHHHHHHHh
Q 018271 173 SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA---SGFPGNLYVGSIIVGV 249 (358)
Q Consensus 173 ~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~---~~~~~~l~~~~~l~g~ 249 (358)
++++++++-+++.+....|.+++.+..|++.||+ |-|+++..+.++.++..++.. ..+.+.+++.++++|+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~------G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF------GARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGL 140 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc------CchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHH
Confidence 4578899999999999999999999999999999 445566667777777776654 2344567889999999
Q ss_pred hhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhh-ccCCCCCccccccchHHHHHHHHHHHHH
Q 018271 250 CYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN-VASGEGNSCNGTHCFMLSFLIMASVAFV 328 (358)
Q Consensus 250 ~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~-~g~~~~~~~~g~~~~~~~f~~~~~~~~~ 328 (358)
+.|..++....+.+...|+++|++..++...+..+|.+ ++-+++|++-+. .| |+.+|++.+++.++
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v-~~mp~sg~lc~s~~G------------W~sifY~~g~~g~i 207 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTI-ITMPVSGLLCESSLG------------WPSIFYVFGIVGLI 207 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHhccCCC------------CchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999995 677799999988 66 99999999999888
Q ss_pred HHHHHHHHHH
Q 018271 329 GCLVAFLLFI 338 (358)
Q Consensus 329 ~~~~~~~~~~ 338 (358)
-.++.+++..
T Consensus 208 ~~~~w~~~~~ 217 (466)
T KOG2532|consen 208 WFILWFLFYS 217 (466)
T ss_pred HHHHHHHHhc
Confidence 8876655543
No 184
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.21 E-value=9.8e-09 Score=97.36 Aligned_cols=156 Identities=12% Similarity=0.016 Sum_probs=104.5
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
.++.++++.+|...+..++.......+....+.+.++ +|++..+.+++.....++..++.++.+++.||++ +.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~------~~ 273 (394)
T PRK11652 200 YRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFS------TL 273 (394)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HH
Confidence 4566778887766555544444444445556667766 7999888888888888888888888888888874 22
Q ss_pred HHHH-HHHHHHHHHHHHHH-h--cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhH
Q 018271 216 SFIA-ITLATMSVGHIVVA-S--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 291 (358)
Q Consensus 216 ~~~~-~~~~~~~~~~~l~~-~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp 291 (358)
.... .......+...... . .+.+.+....++.|++.+..++....+..|.+| +++|+..++.+....+|.. +++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~-~~~ 351 (394)
T PRK11652 274 MWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSG-LAA 351 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHH-HHH
Confidence 2222 22222222222211 1 223345556677888888778888888888887 6789999999988899985 788
Q ss_pred HHHHHHHhh
Q 018271 292 RIIGYIYDN 300 (358)
Q Consensus 292 ~i~g~l~~~ 300 (358)
.+.|.+.+.
T Consensus 352 ~~~~~~~~~ 360 (394)
T PRK11652 352 LLSAMLPQT 360 (394)
T ss_pred HHHHHccCC
Confidence 888877554
No 185
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.21 E-value=6.1e-10 Score=109.50 Aligned_cols=187 Identities=12% Similarity=0.086 Sum_probs=120.0
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
+.++.+.+..+-...+.....++.+++.+..|.+... .....+..+.+.++..+..++.||+ |||.+++.+..
T Consensus 295 ~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~------gRr~lll~s~~ 367 (513)
T KOG0254|consen 295 RLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF------GRRKLLLFGAA 367 (513)
T ss_pred HHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh------ccHHHHHHhHH
Confidence 3444445555555555567778899999988887554 5556677778888888889999999 78888888888
Q ss_pred HHHHHHHHHH-h----cC----c----hh-HHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHH
Q 018271 224 TMSVGHIVVA-S----GF----P----GN-LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVC 289 (358)
Q Consensus 224 ~~~~~~~l~~-~----~~----~----~~-l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~ 289 (358)
.+.++.++++ . .. . +. +...++....+..+..++.+.+.+|.||.+.|+++.++....+.+.++++
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v 447 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI 447 (513)
T ss_pred HHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH
Confidence 8888777654 1 11 1 11 11222222223334445666788999999999999999988877776533
Q ss_pred hHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHH-HHHHHHHHhHHHHHHHHHh
Q 018271 290 SVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL-VAFLLFIRTRRFYKQVVLR 350 (358)
Q Consensus 290 gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 350 (358)
....-.+.+..+ ....|...++.+.+..+ ...++.+|+|.+..+..++
T Consensus 448 -~~~~~~~~~~~~------------~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~ 496 (513)
T KOG0254|consen 448 -SFFFPFITEALG------------IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINE 496 (513)
T ss_pred -HHHHHHHHHhcc------------ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence 112222222211 24566666666666665 5666778888776554433
No 186
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.20 E-value=1e-10 Score=106.05 Aligned_cols=117 Identities=19% Similarity=0.173 Sum_probs=100.6
Q ss_pred CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhc
Q 018271 175 GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGC 253 (358)
Q Consensus 175 G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~ 253 (358)
+-+..-+|.+-+.+++...+.++.+|.+|||+ |||.++.++.+..++...+.+ ..+...+++.+++.|++.|-
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y------GRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn 137 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRY------GRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN 137 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhh------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc
Confidence 33445678888999999999999999999999 888999999888888777776 55554555669999988864
Q ss_pred ccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHh
Q 018271 254 QWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 299 (358)
Q Consensus 254 ~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~ 299 (358)
.++..++++|+++++.|+.+++.++++..+|- ++||.|+|++.+
T Consensus 138 -l~v~rAiisdV~sek~r~l~ms~v~~a~~lGf-ilGPmIGgyla~ 181 (451)
T KOG2615|consen 138 -LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGF-ILGPMIGGYLAQ 181 (451)
T ss_pred -hHHHHHHHHhhcChhhccceeeeeehhhhcch-hhcchhhhHHHh
Confidence 46788999999999999999999999999998 699999999987
No 187
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.20 E-value=1.4e-09 Score=107.19 Aligned_cols=269 Identities=13% Similarity=-0.004 Sum_probs=145.3
Q ss_pred HHhhcccCchhHHHHHHHHHHHHHhhhhHHhhhhhhhccccCCCCcccCCCCCCCCCCCccccccc-CCCCcccccCCCC
Q 018271 37 ILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFS-ASQDSVAYHELPG 115 (358)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 115 (358)
++..+...+||.++...++.++.+++.+..+|+|+|+..+++.++ ....+.+. .+.+. ..+.++..+..
T Consensus 225 ~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~----a~~~l~~~----a~~n~~~~~~~~~~~~~-- 294 (521)
T KOG0255|consen 225 GAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDE----AIKILKKI----AKLNGRKLSVKELLRLE-- 294 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHH----HHHHHHHH----HhhcCCCCCcHHHHHHH--
Confidence 333444467999988888888777777777799999988776532 11100000 00000 00000000000
Q ss_pred CccchhhhhccccccccccccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHh
Q 018271 116 EESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLG 195 (358)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g 195 (358)
....+......+........++.+++....+...+..........-+......+|.+... ..++.......+
T Consensus 295 -----~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~~~~---~~~~~~~~~~p~ 366 (521)
T KOG0255|consen 295 -----LLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGNIYL---NFTLSGLVELPA 366 (521)
T ss_pred -----HHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCchHHH---HHHHHHHHHhhH
Confidence 000000111111223456667765432222222222211122222333333444544322 223333355566
Q ss_pred hhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCc-h--hHHHHHHHHHhhhhcccccHHHHHHHhhCCcch
Q 018271 196 RFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFP-G--NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHM 271 (358)
Q Consensus 196 ~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~-~--~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~ 271 (358)
....+...|++ ||+.....+..+..++++... .... . ...+...+..++.+..+.+.+.+..|++|+..|
T Consensus 367 ~~~~~~~~~~~------gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r 440 (521)
T KOG0255|consen 367 YFRNGLLLPEF------GRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVR 440 (521)
T ss_pred HHHHHHHHHHh------CcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 66668888998 788888888888888777766 3222 2 233344444456666667779999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 018271 272 GTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRF 343 (358)
Q Consensus 272 g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 343 (358)
.++.+..+...++|+ +++|.+.-...... ....+.+.+.+..+..+++..+.++++.+
T Consensus 441 ~~~~~~~~~~~~~~~-i~ap~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 441 NTAVGAISAAARLGS-ILAPLFPLLLRQMF-------------PLLGLILFGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHhhhc-------------ccchHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 999999999999999 47887665444422 12222224555556665655666666553
No 188
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.19 E-value=1.8e-10 Score=113.46 Aligned_cols=137 Identities=15% Similarity=0.064 Sum_probs=119.5
Q ss_pred cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhh
Q 018271 174 LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYG 252 (358)
Q Consensus 174 ~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g 252 (358)
...+.....+..+++.++..+|.+++|.++||+ |||.++..+.++..++.++.+ .++...+.+.+++.|++.+
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~------GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~ 186 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF------GRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGS 186 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc------ccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhcc
Confidence 356667778888999999999999999999998 888999999999998888777 6788889999999999999
Q ss_pred cccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 253 CQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 253 ~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
+.......+..|+++++.|+.+..+ ......++ .++|.+++++.. + ||+.+++.....++..+.
T Consensus 187 ~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~-~~~~~~~a~~~~--~------------Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 187 GPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGG-LMLPAGAAYITR--D------------WRWLFWIISIPSGLFLLL 250 (521)
T ss_pred chhHHhHhhheeecCcchhhHHHHH-HHHHHHHH-HHHHHHHHHHHh--h------------HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 55666666 367888888887 2 999999998888877655
No 189
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.18 E-value=1.7e-09 Score=101.77 Aligned_cols=130 Identities=19% Similarity=0.241 Sum_probs=95.5
Q ss_pred HHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCch--------hHHHHHHHHHhhhhcccccHHH
Q 018271 190 IWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPG--------NLYVGSIIVGVCYGCQWSLMPT 260 (358)
Q Consensus 190 i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~--------~l~~~~~l~g~~~g~~~~~~~~ 260 (358)
+...++.++.|+++||+ |||+.+..+.++..++.++.. .++.. .+++.+++.|++.+...+....
T Consensus 46 ~~~~i~~~~~G~l~dr~------g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 119 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRI------GRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAAL 119 (394)
T ss_pred HHhhhHHHHhhhhhhhh------hhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHH
Confidence 34457899999999999 677778788888777777666 34432 3567788999999988888999
Q ss_pred HHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHH
Q 018271 261 ITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 261 ~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~ 330 (358)
++.|.+++++|+...++.+.+..+|.. +++.+.+.+....+.. -....+|+..|++.+++.+++.
T Consensus 120 ~~~~~~~~~~r~~~~~~~~~~~~~G~~-i~~~~~~~~~~~~~~~----~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 120 YLAEYAPPGKRGFYGSFQQVGAPVGLL-LAALTVLLLSYLLGDD----ALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HhhhcCCcccchHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHH----HhhccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999984 7887776654311100 0001129999987776655543
No 190
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.15 E-value=1.1e-09 Score=105.75 Aligned_cols=154 Identities=15% Similarity=0.199 Sum_probs=121.8
Q ss_pred HhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHH-HHHHhcCchhHHHHHHHHHhh
Q 018271 172 ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGH-IVVASGFPGNLYVGSIIVGVC 250 (358)
Q Consensus 172 ~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~-~l~~~~~~~~l~~~~~l~g~~ 250 (358)
++.++...+.+.+.+++.++.++|.+.++.+.||+ +-...+....+...+.. +.....+.+.+++.+++.|++
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~------~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~ 147 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF------PLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLF 147 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC------ChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46677788899999999999999999999999999 43333333333333333 333356788899999999999
Q ss_pred hhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHH
Q 018271 251 YGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 330 (358)
Q Consensus 251 ~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~ 330 (358)
.++.++....+++..|++++||+.+|+.+....+|+ ++|++++..++...++ .+..+|++.|++.++++++..
T Consensus 148 es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~-i~ggliA~g~~~~~~~------~~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 148 ESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGN-IFGGLIAYGVFKLNGS------GGLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred hcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhh-HHHHHHHHHhhhhcCC------CCcCCceeehhHHHHHHHHHH
Confidence 999999999999999999999999999999999999 5888888877653332 134459999999999998888
Q ss_pred HHHHHHHH
Q 018271 331 LVAFLLFI 338 (358)
Q Consensus 331 ~~~~~~~~ 338 (358)
++++++.+
T Consensus 221 i~~f~~lp 228 (495)
T KOG2533|consen 221 IVVFFFLP 228 (495)
T ss_pred heEEEEec
Confidence 77655543
No 191
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.13 E-value=5.6e-10 Score=107.22 Aligned_cols=171 Identities=13% Similarity=0.119 Sum_probs=116.1
Q ss_pred hhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCc-
Q 018271 161 LATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFP- 237 (358)
Q Consensus 161 ~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~- 237 (358)
..+..+++++.. ++|++..+++++.++..+...+..++.|+++||.++|+. +||+.+..+....+++.+++. .++.
T Consensus 16 ~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~G-rrr~~i~~~~~~~~i~~~~~~~~~~~~ 94 (437)
T TIGR00792 16 AIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWG-KFRPWLLIGAIPFSIVLVLLFTTPDFS 94 (437)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCC-CcchhHHHhHHHHHHHHHHHHhCCCCC
Confidence 344445555554 679999999999999999999999999999999876653 346666667666666665554 2221
Q ss_pred -----hhHHHHHHHHHhhhhcccccHHHHHHHhhC-CcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCcccc
Q 018271 238 -----GNLYVGSIIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNG 311 (358)
Q Consensus 238 -----~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g 311 (358)
..+++..++.+.+.+.......++.+|+.+ +++|++..++.+.+..+|+. +++.+.+.+....+.. ..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~-l~~~~~~~l~~~~~~~-----~~ 168 (437)
T TIGR00792 95 ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGL-LVAVIVLPLVSYFGGG-----DD 168 (437)
T ss_pred cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCC-----cc
Confidence 123344556676666666666778888874 57899999998888888874 5556666555433210 01
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 312 THCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 312 ~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
..+|+..+.+.+++.++..++.+...+
T Consensus 169 ~~g~~~~~~i~~~l~~~~~~~~~~~~~ 195 (437)
T TIGR00792 169 KFGWFMFALVLALIGVVSLIICFFGTK 195 (437)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 123999998888877777655444433
No 192
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.12 E-value=8e-08 Score=91.91 Aligned_cols=157 Identities=12% Similarity=-0.051 Sum_probs=97.4
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc-CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
..++.++++.+|...+..++.....+.+....|.+.++. |++..+.++.......+..++..+.+.+.++.. ++
T Consensus 210 ~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~-----~~ 284 (413)
T PRK15403 210 DFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPT-----EP 284 (413)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----ch
Confidence 356788999999888877777777777778889888865 999999988877777777777777666543321 22
Q ss_pred HHHHHHHHHHHHHHHHHH--H---hcCch-hHHHHHHHHHhhhhcccccHHHHHHHhhC-CcchHHHHHHHHHHhhhHHH
Q 018271 215 PSFIAITLATMSVGHIVV--A---SGFPG-NLYVGSIIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGSY 287 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~--~---~~~~~-~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-~~~~g~~~g~~~~~~~ig~~ 287 (358)
+..... ..+..++..++ . ..+.. ..++..++.+++.+...+...... +.+ ...+|++.++.+.....+..
T Consensus 285 ~~~~~~-~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~a--l~~~~~~~G~a~a~~~~~~~~~~~ 361 (413)
T PRK15403 285 RFIWRA-VPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFT--LFSNNLPKGTVSASLNMVILMVMA 361 (413)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHH--hccCCCCCcHHHHHHHHHHHHHHH
Confidence 221111 11111111111 1 12222 234566667777766655544322 122 22478888888777776664
Q ss_pred HHhHHHHHHHHhhc
Q 018271 288 VCSVRIIGYIYDNV 301 (358)
Q Consensus 288 i~gp~i~g~l~~~~ 301 (358)
.++.+.|++.+..
T Consensus 362 -~~~~~~g~~~~~~ 374 (413)
T PRK15403 362 -VSVEIGRWLWFNG 374 (413)
T ss_pred -HHHHHHHHHHHcC
Confidence 6778888887763
No 193
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.06 E-value=1.8e-09 Score=105.07 Aligned_cols=172 Identities=15% Similarity=0.121 Sum_probs=134.7
Q ss_pred HHHHHHHHHhhhhhhhHHh----cHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHH
Q 018271 147 WLLFVAMLCGMGSGLATVN----NISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 222 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~----~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~ 222 (358)
|.+.++.|+.....+++.. ..+.+.++++.+..+.+++.++......+..++.+.+.||+ |.|.+.+++.
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf------g~R~v~i~G~ 118 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF------GCRTVMIAGG 118 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc------CchHHHHHHH
Confidence 5555555555444444333 45667778898888899999999999999999999999999 6667778888
Q ss_pred HHHHHHHHHHH-hcCchhHHH-HHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhh
Q 018271 223 ATMSVGHIVVA-SGFPGNLYV-GSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN 300 (358)
Q Consensus 223 ~~~~~~~~l~~-~~~~~~l~~-~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~ 300 (358)
++..+++++.. .++.+.+++ ..++.|+|.+..+.....++..+|. ++|+.+.|+...+..+|.+++ |++.-++.+.
T Consensus 119 ~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~-~~l~~~l~~~ 196 (509)
T KOG2504|consen 119 LVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVF-PPLLKYLLSK 196 (509)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeH-HHHHHHHHHH
Confidence 88888888776 556655554 5678889998888887778886665 889999999999999999755 7789999999
Q ss_pred ccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 301 VASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 301 ~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
.| |++.+++.+.+.+-.++.....++
T Consensus 197 ~G------------~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 197 YG------------WRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred hC------------cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 98 999999999988777665555444
No 194
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.03 E-value=5.3e-09 Score=99.14 Aligned_cols=172 Identities=15% Similarity=-0.000 Sum_probs=108.8
Q ss_pred HHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHH--HHHHHHHHHHhhhHh-HHHHHHHhhhcCCchHHHHHHHHH
Q 018271 147 WLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSL--VSLWSIWNFLGRFGG-GYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~--~~~~~i~~~~g~~~~-G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
..+...++............+|.++++.|+|.++.+++ ..+..+...+..++. ++.+||+|+| |..+....+
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r-----~~~i~~~~~ 78 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRR-----RSWVLPMQC 78 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcc-----hhHHHHHHH
Confidence 34455566666665667789999999999999999987 355566666666665 4466776432 222222222
Q ss_pred HHHHHHHHHH-h--c-C-chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHH
Q 018271 224 TMSVGHIVVA-S--G-F-PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIY 298 (358)
Q Consensus 224 ~~~~~~~l~~-~--~-~-~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~ 298 (358)
+.......+. . . + ...+.....+.+++........-.+..|..+.+.++...+....+..+|. ++|+.+.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~-~~g~~~~~~l~ 157 (390)
T TIGR02718 79 LVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGF-FGGGAGTLVLF 157 (390)
T ss_pred HHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 2222122222 1 1 1 11222333333344444444555667787777777887777877778888 47888888999
Q ss_pred hhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 299 DNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 299 ~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
++.| |+..|++.+++.++..+..+++
T Consensus 158 ~~~g------------w~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 158 GKFG------------QRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHhC------------HHHHHHHHHHHHHHHHHHHHHc
Confidence 9888 9999999998887766655444
No 195
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.02 E-value=4.6e-07 Score=86.15 Aligned_cols=159 Identities=17% Similarity=0.106 Sum_probs=120.5
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 215 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~ 215 (358)
....++|+.+..+.+++++.........+...+|.+. +|.+.....+.......+..++.+++..+++|+ |+|
T Consensus 229 ~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~------gkk 302 (467)
T COG2211 229 FLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF------GKK 302 (467)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh------chH
Confidence 4567789988888887777776666666666676663 477777776777777778888899999999999 667
Q ss_pred HHHHHHHHHHHHHHHHHH-hc--CchhHHHHHHHHHhhhhcccccHHHHHHHhh-------CCcchHHHHHHHHHHhhhH
Q 018271 216 SFIAITLATMSVGHIVVA-SG--FPGNLYVGSIIVGVCYGCQWSLMPTITYEIF-------GVGHMGTIFNTIAIASPVG 285 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~l~~-~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f-------~~~~~g~~~g~~~~~~~ig 285 (358)
.++.++.++.+++.+++. .+ +....++..++.+++.+...++.+++++|.. +.+.-|..+|.......+|
T Consensus 303 ~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g 382 (467)
T COG2211 303 KLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLG 382 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 778888887777776655 22 2344555667888899988899999988663 3345588889999999999
Q ss_pred HHHHhHHHHHHHHhhcc
Q 018271 286 SYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 286 ~~i~gp~i~g~l~~~~g 302 (358)
.. ++..+.|++.+..|
T Consensus 383 ~a-la~~~~g~~L~~~G 398 (467)
T COG2211 383 LA-LAGFIPGWILGAIG 398 (467)
T ss_pred HH-HHHHHHHHHHHHcC
Confidence 96 77889999988776
No 196
>PRK11462 putative transporter; Provisional
Probab=98.98 E-value=9.9e-07 Score=85.60 Aligned_cols=159 Identities=9% Similarity=0.032 Sum_probs=94.3
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.+..++|+.++.+....++.............++.+...-+....+.+.+...+++++|.+++++++||++ +|.
T Consensus 221 l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~g------kk~ 294 (460)
T PRK11462 221 LRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKC------KVT 294 (460)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------hHH
Confidence 46677888877766555555444444444444444433222334455667778889999999999999994 334
Q ss_pred HHHHHHHHHHH-HHHHHHhcC--chhHHHHHHHHHhhhhcccccHHHHHHHhhC-------CcchHHHHHHHHHHhhhHH
Q 018271 217 FIAITLATMSV-GHIVVASGF--PGNLYVGSIIVGVCYGCQWSLMPTITYEIFG-------VGHMGTIFNTIAIASPVGS 286 (358)
Q Consensus 217 ~~~~~~~~~~~-~~~l~~~~~--~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-------~~~~g~~~g~~~~~~~ig~ 286 (358)
.+..+..+.++ ..+.+..+. ...+++..++.|++.+...++.+++++|... .+.-|..++.......+|.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~ 374 (460)
T PRK11462 295 IFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGL 374 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHH
Confidence 33322222222 222222222 2233444556677666656666667666543 3344666677778888888
Q ss_pred HHHhHHHHHHHHhhcc
Q 018271 287 YVCSVRIIGYIYDNVA 302 (358)
Q Consensus 287 ~i~gp~i~g~l~~~~g 302 (358)
. +++.+.|.+++..|
T Consensus 375 a-lg~~i~g~iL~~~G 389 (460)
T PRK11462 375 A-FGGALIGWMLAYGG 389 (460)
T ss_pred H-HHHHHHHHHHHHcC
Confidence 5 78888998887654
No 197
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.93 E-value=5.1e-08 Score=89.65 Aligned_cols=165 Identities=11% Similarity=0.017 Sum_probs=127.5
Q ss_pred hHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH----hcCc
Q 018271 162 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA----SGFP 237 (358)
Q Consensus 162 ~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~----~~~~ 237 (358)
.....+|.+.+.++.+..+++++-..+..+..++.+..|++.+|+ +.|.-++.++.++++++.++. ..++
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~------gyk~gi~lgL~l~avg~~lF~pAa~~~~y 104 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL------GYKAGIVLGLLLYAVGAALFWPAASSKSY 104 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh------hhHHHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 344567888888899999999999999999999999999999999 556668889999999988875 2344
Q ss_pred hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC----CCC---Cccc
Q 018271 238 GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS----GEG---NSCN 310 (358)
Q Consensus 238 ~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~----~~~---~~~~ 310 (358)
..+++..++.|.|.+...+..+++++.+.+++.-..-+++....+.+|+. .+|++++.+..+... +.. ..-.
T Consensus 105 ~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~-~gp~~g~~lils~~~~~~~~~~~~~~~~~ 183 (422)
T COG0738 105 GFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAI-LGPLLGSSLILSGVALTMSAAQILAIKGA 183 (422)
T ss_pred HHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHH-HHHHHHHHHHHhhhhhccCHHHHHHHHHH
Confidence 56777788999999999999999999999998888899999999999995 899999998874110 000 0000
Q ss_pred cccchHHHHHHHHHHHHHHHHHH
Q 018271 311 GTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 311 g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
-..-++..|..++...++.++..
T Consensus 184 ~~~~v~~pYl~~~~~lvll~v~~ 206 (422)
T COG0738 184 DASSVQFPYLILAGLLVLLAVLI 206 (422)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHH
Confidence 00016777777777666655443
No 198
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.91 E-value=5.8e-08 Score=88.09 Aligned_cols=153 Identities=14% Similarity=0.130 Sum_probs=123.4
Q ss_pred hHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhcCchhHH
Q 018271 162 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLY 241 (358)
Q Consensus 162 ~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~~~~~l~ 241 (358)
..-..++.+-+++|.|.+.+++++++..++.....++..+++.|+ +....+..++++.+++..+=...+...++
T Consensus 30 svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~------g~er~l~~~Llli~~G~~iR~~~~~~~L~ 103 (395)
T COG2807 30 SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF------GEERSLFLALLLIAAGILIRSLGGLPLLF 103 (395)
T ss_pred hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH------hhHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 344456677778999999999999999999999999999999999 45555666777666666654434556678
Q ss_pred HHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHH
Q 018271 242 VGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLI 321 (358)
Q Consensus 242 ~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~ 321 (358)
....+.|.+.+..+.+.|..+.+.|| ++.+..+|++.+...+|+. +++.+.--+.++.++ |+....+
T Consensus 104 ~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aa-Laa~lavpla~~~~g-----------W~~aL~~ 170 (395)
T COG2807 104 LGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAA-LAAALAVPLAQHSGG-----------WRGALGF 170 (395)
T ss_pred HHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHH-HHhhhhhHHHHhhcc-----------HHHHHHH
Confidence 88899999999999999999999999 6668999999888888775 677677777776644 9999999
Q ss_pred HHHHHHHHHHHH
Q 018271 322 MASVAFVGCLVA 333 (358)
Q Consensus 322 ~~~~~~~~~~~~ 333 (358)
.+..+++++++.
T Consensus 171 WAl~allAl~~W 182 (395)
T COG2807 171 WALLALLALLIW 182 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999988887553
No 199
>PRK09669 putative symporter YagG; Provisional
Probab=98.89 E-value=2.6e-08 Score=96.13 Aligned_cols=169 Identities=11% Similarity=0.083 Sum_probs=107.7
Q ss_pred hhHHhcHHHHH-HhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCc-
Q 018271 161 LATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFP- 237 (358)
Q Consensus 161 ~~~~~~l~~~~-~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~- 237 (358)
..+..+++++. +.+|++...++.+.++..+...+..|+.|+++||...|.+ +||+.+..+.+..++..+++. .++.
T Consensus 26 ~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~G-rrrp~il~~~~~~~i~~~l~f~~p~~~ 104 (444)
T PRK09669 26 QTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHG-QFRPYLLWFAIPFGVVCLLTFYTPDFG 104 (444)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCC-CcchhHHHHHHHHHHHHHHHHhCCCCC
Confidence 33445555554 4679999999999999999999999999999999766553 345666666555555554433 3221
Q ss_pred -----hhHHHHHHHHHhhhhcccccHHHHHHHhh-CCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCcccc
Q 018271 238 -----GNLYVGSIIVGVCYGCQWSLMPTITYEIF-GVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNG 311 (358)
Q Consensus 238 -----~~l~~~~~l~g~~~g~~~~~~~~~~~e~f-~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g 311 (358)
..+++..++.+.++........++.+|+. ++++|.+..++...+..+|+. +++.+...+....+... .
T Consensus 105 ~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~-i~~~~~~pl~~~~~~~~-----~ 178 (444)
T PRK09669 105 ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGL-IVSVIALPLVDILGKGD-----E 178 (444)
T ss_pred cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCc-----h
Confidence 12233344555556556666778888988 456788888887777777663 45544444443332100 1
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 312 THCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 312 ~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
..+|+..+.+.++++++..+++++.
T Consensus 179 ~~g~~~~~~i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 179 QKGYFYAMMVMGLLGVVLFFCCFFM 203 (444)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 1237878877777776666554443
No 200
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.87 E-value=2.3e-06 Score=83.42 Aligned_cols=180 Identities=11% Similarity=0.012 Sum_probs=119.8
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCc----hhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH--
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPT----SAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF-- 217 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~----~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~-- 217 (358)
.+..+++...+....+.-..+.++.+.++ .+.+. ...+++.++..+.-++..++..++-.+..+|+. +.+..
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~-~~~~~~k 351 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGK-DPTTPLK 351 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCC-CCCcHHH
Confidence 34444444444444444445556666554 23221 125677777777777777776665556655421 11222
Q ss_pred HHHHHHHHHHHHHHHH----------hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHH
Q 018271 218 IAITLATMSVGHIVVA----------SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSY 287 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~----------~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~ 287 (358)
+.++.++.++++..+. ..+.+++++..++.+++.....+...+++.+..|++.||+.+|+......+|..
T Consensus 352 ~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~ 431 (475)
T TIGR00924 352 FTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSL 431 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666555443 135566788889999999999999999999999999999999999999999995
Q ss_pred HHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 288 VCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 288 i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
+++.+.....+..+ |...|...++.+++..++.+++.+
T Consensus 432 -l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 432 -LGGYLATFGAVPQG------------VTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred -HHHHHHHHHhcccc------------hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777666555 778887777777776655544443
No 201
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.85 E-value=5.5e-08 Score=93.19 Aligned_cols=156 Identities=12% Similarity=0.038 Sum_probs=94.1
Q ss_pred HHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHH
Q 018271 152 AMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHI 230 (358)
Q Consensus 152 ~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~ 230 (358)
.+++.....-.+...++.+++ +.|++..+.+++.+...++..++++++|+++||++ +||+.+.++.++..+...
T Consensus 10 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g-----~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 10 MSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWL-----SAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHH
Confidence 334443333444455555554 57999999999999999999999999999999985 335566666666655555
Q ss_pred HHH-hcCchhHHHHHHHHHhhhhcccccHHHHH----H----HhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhc
Q 018271 231 VVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTIT----Y----EIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 301 (358)
Q Consensus 231 l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~----~----e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~ 301 (358)
+.. .++.+.+++.+++.|++.+...+...+.. . |......|.+.+| .+|. .++|.++|.+ +..
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~-~ig~~l~g~l-~~~ 156 (418)
T TIGR00889 85 FAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGF-IAAMWAVSLL-DIE 156 (418)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHH-HHHHHHHHHh-ccc
Confidence 544 44556666666777776655544433332 1 1111122333333 3455 4677778876 222
Q ss_pred cCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 302 ASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 302 g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
. .+..|++.+++.++..+.
T Consensus 157 ~------------~~~~f~~~~~~~~~~~~~ 175 (418)
T TIGR00889 157 L------------SNIQLYITAGSSALLGVF 175 (418)
T ss_pred c------------hhHHHHHHHHHHHHHHHH
Confidence 1 123466666655555543
No 202
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.85 E-value=7.5e-08 Score=93.56 Aligned_cols=177 Identities=15% Similarity=0.032 Sum_probs=115.9
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
...++...++..... ......++.+++ ++|++.++.+.+.++..+...+- +++|.++||++... ..||+.+.++.+
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K-~l~g~l~D~~~i~G-~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALK-PFAGVMSDTFPLFG-YTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCC-ccchHHHHHHHH
Confidence 334445456555555 555555666666 67999999999999999998884 55999999995322 146666666655
Q ss_pred HHH-HHHHHHHh-cCchh-HHHHHHHHHhhhhcccccHHHHHHHhhCCcchHH---HHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 224 TMS-VGHIVVAS-GFPGN-LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGT---IFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 224 ~~~-~~~~l~~~-~~~~~-l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~---~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
+.. +....+.. ++... ..+..++.+++.+......-++..|..+ ++++. ..++......+|. ++|+.++|.+
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~-~vg~~l~G~l 181 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGG-LISSLLGGPL 181 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHH-HHHHHHHHHH
Confidence 542 33232332 22222 2335667778877777778889999888 54433 3333333344677 5788999999
Q ss_pred HhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 298 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 298 ~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
.+..+ |+..|++.+.+.++..+.. .+.+|
T Consensus 182 ~~~~~------------~~~~f~~~a~l~ll~~~~~-~~~~E 210 (468)
T TIGR00788 182 LDKTL------------TRILFLITAALLLLQLFVS-NLSKE 210 (468)
T ss_pred HHhcC------------cchHHHHHHHHHHHHHHHH-Hhccc
Confidence 99887 9999999988887774433 33344
No 203
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.81 E-value=2e-07 Score=89.32 Aligned_cols=134 Identities=16% Similarity=0.200 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH----hcCchhHHHHHHHHHhhhhccccc
Q 018271 182 NSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA----SGFPGNLYVGSIIVGVCYGCQWSL 257 (358)
Q Consensus 182 ~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~----~~~~~~l~~~~~l~g~~~g~~~~~ 257 (358)
+..++.+.+++++|.++.|+++||+ |||..+.+..++..++.++.. .+....+.+.+++.|+..|...+.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~------GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~ 136 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF------GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGL 136 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh------cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHH
Confidence 4567889999999999999999999 666666666655555444432 456678889999999999999999
Q ss_pred HHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHH-HHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 258 MPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG-YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 258 ~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g-~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
.+.++.|..|.+.||..-.+..++..+|.. ++..++- .+..... .|.+.+.+..+.+++..+..
T Consensus 137 ~pmyl~E~sP~~~RG~~g~~~~~~~~~g~l-l~~~~~l~~ilGt~~-----------~W~~l~~~~~i~~~~~l~~l 201 (485)
T KOG0569|consen 137 VPMYLTEISPKNLRGALGTLLQIGVVIGIL-LGQVLGLPSLLGTED-----------LWPYLLAFPLIPALLQLALL 201 (485)
T ss_pred HHHHHhhcChhhhccHHHHHHHHHHHHHHH-HHHHHccHHhcCCCc-----------chHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998888884 5543322 2332222 28888877777766666544
No 204
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.80 E-value=3.8e-08 Score=92.40 Aligned_cols=172 Identities=15% Similarity=0.179 Sum_probs=98.0
Q ss_pred hhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHH
Q 018271 141 VCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIA 219 (358)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~ 219 (358)
.|++.+|.+...+++..+..-.+.+..|..+++ .|+|.++.|.+.+...+...+.+++.|.++||.+.|| +.+..
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK----~Ll~~ 79 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKK----HLLWF 79 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCS----HHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhH----HHHHH
Confidence 467788888888877777766777778888875 7999999999999999999999999999999997543 12222
Q ss_pred HHHHHHH-HHHHHHHh-cC-chhHHHHHHH----HHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHH
Q 018271 220 ITLATMS-VGHIVVAS-GF-PGNLYVGSII----VGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 292 (358)
Q Consensus 220 ~~~~~~~-~~~~l~~~-~~-~~~l~~~~~l----~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~ 292 (358)
+..+... ...+.... +- ....+++.++ ++++..+..++.=+++.+. . ++.+--+|-.-+.+.+|-+ .+..
T Consensus 80 i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~-s-r~~~feYG~~R~wGSig~a-i~s~ 156 (412)
T PF01306_consen 80 IAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV-S-RRNGFEYGRARMWGSIGFA-IASL 156 (412)
T ss_dssp HHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH-H-HHHSS-HHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH-H-HHhcCCcchHHHHhhHHHH-HHHH
Confidence 2222211 11111111 10 0112223333 3333333333333333222 1 2234445555566666663 5667
Q ss_pred HHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 293 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 293 i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
++|.+++.. -...||+..+..++..++
T Consensus 157 ~~G~L~~i~-------------p~~~fwi~s~~~~il~ll 183 (412)
T PF01306_consen 157 LAGILFNIN-------------PNIIFWIASAAAIILLLL 183 (412)
T ss_dssp HHHHHHHHH-------------HHHHHHHHHHHHHHHHHH
T ss_pred HhheeeeeC-------------ccHHHHHHHHHHHHHHHH
Confidence 889888753 456777655544444433
No 205
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.80 E-value=2e-07 Score=90.61 Aligned_cols=159 Identities=11% Similarity=-0.004 Sum_probs=111.6
Q ss_pred cHHHhhhchhHHHHHHHHHH-hh-hhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCc
Q 018271 136 NILQSVCTLNFWLLFVAMLC-GM-GSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWE 213 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~g 213 (358)
..++.++++.+|...+..++ .. ........++ ...+.+|+++...+......+++.++|..+.+++.+|+ +
T Consensus 244 ~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~------~ 316 (468)
T TIGR00788 244 GLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF------P 316 (468)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC------C
Confidence 34556777887764443333 11 1111100111 11235799999999999999999999998888887777 6
Q ss_pred hHHHHHHHHHHHHHHHHHHH--h---------cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHh
Q 018271 214 RPSFIAITLATMSVGHIVVA--S---------GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIAS 282 (358)
Q Consensus 214 r~~~~~~~~~~~~~~~~l~~--~---------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~ 282 (358)
.+.++.++.++.+++.+... . .+........++.+++.+..+.....++.+..|++..|+.+++.+...
T Consensus 317 ~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~ 396 (468)
T TIGR00788 317 YRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASIL 396 (468)
T ss_pred HHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHH
Confidence 66777777777666553321 0 122233445567788888778888899999999999999999999999
Q ss_pred hhHHHHHhHHHHHHHHhhcc
Q 018271 283 PVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 283 ~ig~~i~gp~i~g~l~~~~g 302 (358)
++|.. +++.++|.+.+..|
T Consensus 397 ~lg~~-v~~~~gg~l~~~~g 415 (468)
T TIGR00788 397 HLGSS-VSGFLGVLLMETIG 415 (468)
T ss_pred HHHHH-HHHHHHHHHHHHcC
Confidence 99995 88999999999887
No 206
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.79 E-value=9.1e-06 Score=75.52 Aligned_cols=189 Identities=16% Similarity=0.185 Sum_probs=127.1
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHH-HhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
.+++...+++...++...++...+++.-...+-+|. +.+|++..+.+.+......+..+|-.+.|++..|-. ++
T Consensus 200 a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~-----~~ 274 (403)
T PF03209_consen 200 AWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRL-----GK 274 (403)
T ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----Cc
Confidence 345555666666555555555555555555555554 456999999999999999999999999999877432 22
Q ss_pred HHHHHHHHHHHHHHHH--HHH--hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHh
Q 018271 215 PSFIAITLATMSVGHI--VVA--SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 290 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~--l~~--~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~g 290 (358)
+.....+.....+++. .++ ..+.+.+....+++|++.|......-..+-++..+++-|+.+|....++.++.. ++
T Consensus 275 ~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~G-lg 353 (403)
T PF03209_consen 275 KRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARG-LG 353 (403)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHH-HH
Confidence 2223333333333332 222 345667788889999999877666666777888889999999999999999885 78
Q ss_pred HHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 291 VRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 291 p~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
..++|.+.|....-.+. ....+|..+|.+-+++.++++.+
T Consensus 354 ~~~GG~~~D~~~~~~~~--~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 354 TFLGGALRDLVRALFGN--SPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred HHHHHHHHHHHHHhccC--CcchHHHHHHHHHHHHHHHHHHH
Confidence 88888888754210000 12224888888777776666543
No 207
>PRK11462 putative transporter; Provisional
Probab=98.79 E-value=2.4e-07 Score=89.89 Aligned_cols=169 Identities=9% Similarity=0.042 Sum_probs=114.0
Q ss_pred hhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcC-
Q 018271 160 GLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGF- 236 (358)
Q Consensus 160 ~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~- 236 (358)
...+..++.++.. ..|+++..++.+..+.-+...+.-|+.|+++||...|.+ +||+.+.++.+..++..+++. .+.
T Consensus 25 ~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~G-r~rp~il~g~i~~~i~~~llf~~p~~ 103 (460)
T PRK11462 25 FDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWG-KFRPWVLFGALPFGIVCVLAYSTPDL 103 (460)
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCC-CcchhHhHHHHHHHHHHHHHHhCCCC
Confidence 3344455665555 559999999999999999999999999999999766554 456666667666676666554 321
Q ss_pred -ch----hHHHHHHHHHhhhhcccccHHHHHHHhhC-CcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccc
Q 018271 237 -PG----NLYVGSIIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCN 310 (358)
Q Consensus 237 -~~----~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~ 310 (358)
.. .+.+..++..+++........++.+|+.+ +++|.+..++-..++.+|.. +++.+...+.+..|+.+
T Consensus 104 s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~-~~~~~~~plv~~~g~~~----- 177 (460)
T PRK11462 104 SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM-LSTVLMMPLVNLIGGDN----- 177 (460)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCc-----
Confidence 11 23334455667777777777888889887 57899999999888888874 56666555555443210
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHH
Q 018271 311 GTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 311 g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
...+|.....+.+++.+++..+++.
T Consensus 178 ~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 178 KPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 0123777666666666555544433
No 208
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.79 E-value=9.9e-08 Score=88.87 Aligned_cols=199 Identities=13% Similarity=0.104 Sum_probs=136.9
Q ss_pred ccccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCC
Q 018271 133 EDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 212 (358)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~ 212 (358)
...+.++.+++++|.++.+++....+.+++..+.+-..+...|++...+|+...+..+++++|..++|.+.||..
T Consensus 255 f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk----- 329 (480)
T KOG2563|consen 255 FPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTK----- 329 (480)
T ss_pred HHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhh-----
Confidence 445788999999999999998888877777777776666667998889999999999999999999999999973
Q ss_pred chHHHHHHHHHHHHHH-HHHHHh----cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHH
Q 018271 213 ERPSFIAITLATMSVG-HIVVAS----GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSY 287 (358)
Q Consensus 213 gr~~~~~~~~~~~~~~-~~l~~~----~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~ 287 (358)
.-|..+.+.+....++ +.+... .....++....++|++..+..++..-+-.|..-|..-++..|+.++.+.+-+.
T Consensus 330 ~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~ 409 (480)
T KOG2563|consen 330 KFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGV 409 (480)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHH
Confidence 2334444444444444 222221 22344666778888888888887777777777667778999999887777664
Q ss_pred HHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 018271 288 VCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYK 345 (358)
Q Consensus 288 i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (358)
+ =.++-+...+..+.+ ..+...-+.+...+++++++.+++++..+|.+.
T Consensus 410 ~-~~~~~~~~~~~~~~~--------~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~ 458 (480)
T KOG2563|consen 410 I-LVFIMGILAEDLGPP--------GNTFPANIFLTVSALLGAILVAFFRPDYRRLRA 458 (480)
T ss_pred H-HHHHHHHHhhccCCC--------CCCccchhHhHHHHHHHHHHHhhhhhhHHhHhh
Confidence 3 366677766655421 112233344455555566565666555554433
No 209
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.76 E-value=1.5e-07 Score=87.88 Aligned_cols=105 Identities=17% Similarity=0.226 Sum_probs=82.5
Q ss_pred CCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHh----cCc----hhHHHHHHHH
Q 018271 176 YPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS----GFP----GNLYVGSIIV 247 (358)
Q Consensus 176 ~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~----~~~----~~l~~~~~l~ 247 (358)
+++...+.+-....++.++|+++.||+.||+ |||.++...+++++++.++.+. +++ .++...++++
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~------GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~L 154 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF------GRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLL 154 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh------cchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHh
Confidence 5666677888889999999999999999999 5556666666777776665441 222 3456778999
Q ss_pred HhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHH
Q 018271 248 GVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGS 286 (358)
Q Consensus 248 g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~ 286 (358)
|+|.|+-+++..++++|..-.+.||+-.+.+...+..|.
T Consensus 155 GiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 155 GIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 999999999999999999999999998888755555544
No 210
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.76 E-value=3.6e-07 Score=91.54 Aligned_cols=164 Identities=19% Similarity=0.212 Sum_probs=124.7
Q ss_pred hhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhcC--
Q 018271 160 GLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGF-- 236 (358)
Q Consensus 160 ~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~~-- 236 (358)
+|++...+..|+. .+|++.+.+..+...+....-+.++++|+++|++- ||++.+.++.++..+++.++....
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~l-----G~~~tIl~~~ii~~lG~~llai~a~~ 77 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWL-----GKFKTILYLSIVYVVGHALLSFGAIP 77 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHhccCc
Confidence 4555556655544 57999988888888888888888999999999984 888888888888888887765211
Q ss_pred ----c---hhHHHHHHHHHhhhhcccccHHHHHHHhhCCc---chHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCC
Q 018271 237 ----P---GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVG---HMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEG 306 (358)
Q Consensus 237 ----~---~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~---~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~ 306 (358)
. ...+++..+.+.|.|++-+...+...|.|.++ .+-..+.+...+.++|++ +++++.+++.+..+
T Consensus 78 ~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSl-is~~i~~~l~~~~~---- 152 (654)
T TIGR00926 78 SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSL-ISTIITPILRGDVG---- 152 (654)
T ss_pred ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhc----
Confidence 1 12455667778888999899999999999754 367888888999999995 78889998876543
Q ss_pred Ccccc-ccchHHHHHHHHHHHHHHHHHHHH
Q 018271 307 NSCNG-THCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 307 ~~~~g-~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
|.| ..||...|.+.+++++++.++...
T Consensus 153 --~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 153 --CFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred --ccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 333 235999999999988888766443
No 211
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.76 E-value=2.6e-06 Score=83.91 Aligned_cols=155 Identities=13% Similarity=-0.015 Sum_probs=103.6
Q ss_pred HHhhhc-hhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCc---hhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCC
Q 018271 138 LQSVCT-LNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPT---SAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 212 (358)
Q Consensus 138 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~---~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~ 212 (358)
.+++|+ +.++...+..++....++......|+.... ++-+. ...++.....+++..+|.++.|.+.-+++
T Consensus 303 ~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir----- 377 (599)
T PF06609_consen 303 HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIR----- 377 (599)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHcc-----
Confidence 456776 556666666666666667776777766553 34443 25677778888899999999999987763
Q ss_pred chHHHHHHHHHHHHHHHHHHH---hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHH
Q 018271 213 ERPSFIAITLATMSVGHIVVA---SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVC 289 (358)
Q Consensus 213 gr~~~~~~~~~~~~~~~~l~~---~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~ 289 (358)
+-|+.++++.+++.+++-+++ ..+....+...++.|++.|....+......-..|.+..|++.|+......+|+. +
T Consensus 378 ~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGs-I 456 (599)
T PF06609_consen 378 HIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGS-I 456 (599)
T ss_pred chhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhH-H
Confidence 335666666666665544444 234445566777888888877666666666667888999999999777777664 4
Q ss_pred hHHHHHHHH
Q 018271 290 SVRIIGYIY 298 (358)
Q Consensus 290 gp~i~g~l~ 298 (358)
|.-+...++
T Consensus 457 g~aIy~~I~ 465 (599)
T PF06609_consen 457 GYAIYNAIF 465 (599)
T ss_pred HHHHHHHHH
Confidence 444444333
No 212
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.75 E-value=2.7e-07 Score=83.80 Aligned_cols=143 Identities=13% Similarity=0.072 Sum_probs=110.6
Q ss_pred hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhh
Q 018271 173 SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCY 251 (358)
Q Consensus 173 ~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~ 251 (358)
.-|.+..+..+++.....+..+|...+|.++|++ |||+.....+...++..++-. .++...+.+...+.|++.
T Consensus 107 ~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~------grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~ 180 (528)
T KOG0253|consen 107 VWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI------GRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGV 180 (528)
T ss_pred hhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh------hcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccC
Confidence 3388888889999999999999999999999999 566667777777777666655 567778888999999999
Q ss_pred hcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHH
Q 018271 252 GCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 331 (358)
Q Consensus 252 g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~ 331 (358)
|+ .+...++-.|..|..+|+.-.-+. ....+|. ++...+.=....+.| ||+-+........+.+.
T Consensus 181 gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~-v~ea~law~vm~~~g------------wr~~l~~~~~pl~~~a~ 245 (528)
T KOG0253|consen 181 GG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQ-VFEALLAWGVMSNFG------------WRYLLFTSSTPLMFAAR 245 (528)
T ss_pred CC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHH-HHHHHHHHHHHHhhh------------HHHHHHHHHhHHHHHHH
Confidence 98 777788888999988888776655 7777787 465555545556666 99988887766666665
Q ss_pred HHHHH
Q 018271 332 VAFLL 336 (358)
Q Consensus 332 ~~~~~ 336 (358)
.+.++
T Consensus 246 f~~w~ 250 (528)
T KOG0253|consen 246 FLVWV 250 (528)
T ss_pred HHhhc
Confidence 55444
No 213
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.74 E-value=3e-07 Score=89.55 Aligned_cols=175 Identities=11% Similarity=0.086 Sum_probs=109.6
Q ss_pred HHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHH
Q 018271 154 LCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVV 232 (358)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~ 232 (358)
+........+..+++.|.++ .|++...++.+..+.-+...+..|+.|+++||...|.+ .||+.+..+.+..+++.+++
T Consensus 16 ~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~G-rrrp~il~g~i~~~i~~~ll 94 (473)
T PRK10429 16 FGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWG-KFKPWILIGTLANSVVLFLL 94 (473)
T ss_pred hHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCC-CcchhHhhhhHHHHHHHHHH
Confidence 33334444455666666665 59999999999999999999999999999997644432 34666666767666665554
Q ss_pred H-hc--Cch----hHHHHHHHHHhhhhcccccHHHHHHHhh-CCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCC
Q 018271 233 A-SG--FPG----NLYVGSIIVGVCYGCQWSLMPTITYEIF-GVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 304 (358)
Q Consensus 233 ~-~~--~~~----~l~~~~~l~g~~~g~~~~~~~~~~~e~f-~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~ 304 (358)
. .+ +.. .+.+..++.++++........++.+|+. .+++|.+..++-..+..+|+. +.+.+...+.+..|..
T Consensus 95 f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~-~~~~~~~~~~~~~g~~ 173 (473)
T PRK10429 95 FSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGF-VTAGFTLPFVNYVGGG 173 (473)
T ss_pred HcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCC
Confidence 4 22 111 1233344556666666677788889988 478899988887666666654 3344444333332210
Q ss_pred CCCccccccchHHHHHHHHHHHHHHHHHHHH
Q 018271 305 EGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 335 (358)
Q Consensus 305 ~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~ 335 (358)
. ...+|+....+.+++.+++.+++++
T Consensus 174 ~-----~~~g~~~~~~i~~~~~~~~~~~~~~ 199 (473)
T PRK10429 174 D-----RGFGFQMFTLVLIAFFIVSTIITLR 199 (473)
T ss_pred c-----hhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 0 0112666666666666655544443
No 214
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.74 E-value=2.4e-07 Score=87.95 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=75.6
Q ss_pred hhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchh
Q 018271 161 LATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGN 239 (358)
Q Consensus 161 ~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~ 239 (358)
-.+...+|.++++.|+|..+.+.+.++..+..+++++++|+++||.. .++..+.+..++.++...... ..+.+.
T Consensus 19 G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~-----~~~~~l~~~~l~~~~~~~~~~~~~~f~~ 93 (400)
T PF03825_consen 19 GAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFG-----SAKRILALLSLLSALALLLLAFSSSFWW 93 (400)
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-----hHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34556788999999999999999999999999999999999999985 344455555555555444444 455666
Q ss_pred HHHHHHHHHhhhhcccccHHHHHHHhhC
Q 018271 240 LYVGSIIVGVCYGCQWSLMPTITYEIFG 267 (358)
Q Consensus 240 l~~~~~l~g~~~g~~~~~~~~~~~e~f~ 267 (358)
+++..++..++.....++.-++.-+.-.
T Consensus 94 ~~~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 94 LFVIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 6666677777777777777777666554
No 215
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.73 E-value=3e-08 Score=95.27 Aligned_cols=172 Identities=17% Similarity=0.175 Sum_probs=122.5
Q ss_pred hhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhc-C--
Q 018271 161 LATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASG-F-- 236 (358)
Q Consensus 161 ~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~-~-- 236 (358)
..+..++.++.. ..|.++...+.+..+..+.+.+--|+.|.++||...|.+ +||+.+.++.++.+++.+++... .
T Consensus 18 ~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~G-rrrp~~l~g~i~~~~~~~llf~~~p~~ 96 (428)
T PF13347_consen 18 SLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWG-RRRPWILIGAILLALSFFLLFSPPPAG 96 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccccc-ccceEeehhhHHHHHHHHHhhccccch
Confidence 334445555544 559999999999999999999999999999996544433 45566777777777777766522 1
Q ss_pred --c----hhHHHHHHHHHhhhhcccccHHHHHHHhhC-CcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCcc
Q 018271 237 --P----GNLYVGSIIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSC 309 (358)
Q Consensus 237 --~----~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~ 309 (358)
. ..+.+..+++.+++........++.+|+.+ +++|....++-..+..+|+. +...+.+.+.+..++++
T Consensus 97 ~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~-l~~~~~~~l~~~~g~~~---- 171 (428)
T PF13347_consen 97 LSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSL-LASFLAPILVSWFGGGD---- 171 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHH-HHHHHhhhhhhhhccCc----
Confidence 1 123445556677777777788889999997 46899999998888888884 55667777776655311
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 310 NGTHCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 310 ~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
...+|++..++.+++.+++.++..+..+|
T Consensus 172 -~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 172 -TSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred -cchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 00148999888888888877776666555
No 216
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.72 E-value=5.5e-08 Score=92.20 Aligned_cols=179 Identities=13% Similarity=0.074 Sum_probs=132.5
Q ss_pred HhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH
Q 018271 139 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 218 (358)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~ 218 (358)
+++.+++..++++..++.......+.+.+--.+++.|-.+...|......-.+-++.-++.+++..|+ |+..++
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki------GHv~v~ 439 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI------GHVNVM 439 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh------ccccee
Confidence 34445544444444444333334455566667788876666666666666677788889999999999 555667
Q ss_pred HHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHH-HHHhhhHHHHHhHHHHHH
Q 018271 219 AITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI-AIASPVGSYVCSVRIIGY 296 (358)
Q Consensus 219 ~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~-~~~~~ig~~i~gp~i~g~ 296 (358)
..++....+=++.+. ..++|..+..=++.|+..+.+|....+|++..-|++.++++.|+. ...-++|-. +|.+|+|.
T Consensus 440 ~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g-~GslIGG~ 518 (618)
T KOG3762|consen 440 YLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKG-LGSLIGGF 518 (618)
T ss_pred eehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcc-hhhhhhhh
Confidence 777777776666666 688888888889999999999999999999999999999999998 445566664 67788999
Q ss_pred HHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 297 IYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 297 l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
+.++.| -+..|.+.++.+++.++....+
T Consensus 519 ~v~~fg------------~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 519 VVERFG------------ARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hheeeh------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 999988 6888988888777766554443
No 217
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.70 E-value=1.9e-06 Score=86.68 Aligned_cols=73 Identities=16% Similarity=0.198 Sum_probs=64.4
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHH-HHHHhhhHhHHHHHHHhh
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSI-WNFLGRFGGGYVSDIVLH 208 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i-~~~~g~~~~G~lsDr~~~ 208 (358)
..+++++++.+|...+..++.....+++.+++|.+++ .+|++..++++++.+..+ +.++|.+++|+++||++.
T Consensus 322 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~ 396 (633)
T TIGR00805 322 IIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKL 396 (633)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecc
Confidence 4678899999999999999998899999999999998 469999999999887776 678999999999999853
No 218
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.65 E-value=2.1e-07 Score=85.37 Aligned_cols=184 Identities=15% Similarity=0.054 Sum_probs=127.0
Q ss_pred ccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCc
Q 018271 135 MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWE 213 (358)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~g 213 (358)
.+.+++++++..|...................++.++.+ ...+.-+.++.....++...+|..+.|.++||++. .
T Consensus 261 ~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~----~ 336 (464)
T KOG3764|consen 261 TPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPH----L 336 (464)
T ss_pred ccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCc----h
Confidence 357889999999887766655555555566677776554 45333367777888889999999999999999942 2
Q ss_pred hHHHH-HHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCC---c---chHHHHHHHHHHhhhH
Q 018271 214 RPSFI-AITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV---G---HMGTIFNTIAIASPVG 285 (358)
Q Consensus 214 r~~~~-~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~---~---~~g~~~g~~~~~~~ig 285 (358)
| |.+ ..+.+...+...... .++...+++..+..+++.+...+.......++... + .+|..+++...+..+|
T Consensus 337 ~-wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla 415 (464)
T KOG3764|consen 337 R-WLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLA 415 (464)
T ss_pred h-HHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHh
Confidence 4 333 233333333222222 34455566666666666665555544444444332 2 6789999999999999
Q ss_pred HHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 286 SYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 286 ~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
.+ +||.++|.+.+..| |.|...+.+...++-+-+...+
T Consensus 416 ~a-~GP~~gg~iv~~iG------------F~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 416 YA-IGPTFGGSLVEAIG------------FEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred hh-ccccccchheeehh------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 95 89999999999998 9999998888888777554444
No 219
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.61 E-value=6.1e-07 Score=85.59 Aligned_cols=189 Identities=9% Similarity=0.017 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHh--cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGES--LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 222 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~ 222 (358)
..|+..+..++.......+....-.|+++ .+-+.+..|+.++...++..++.++.|+-+.|.++ -|+.++++.
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~-----~k~Pli~s~ 109 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGS-----VKKPLIVSF 109 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCC-----cccCHHHHH
Confidence 34555555665555444444444456665 68888889999999999999999999998888642 145577788
Q ss_pred HHHHHHHHHHH----hc--CchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHH
Q 018271 223 ATMSVGHIVVA----SG--FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGY 296 (358)
Q Consensus 223 ~~~~~~~~l~~----~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~ 296 (358)
++++++.+++. .+ ..+.+++++++.|++.+. .+..-.|+++..-.+.|.++++..+.+..+|. ++||.+...
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~-ilGp~~q~~ 187 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGI-ILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHH-HHhHHHHHH
Confidence 88888887762 12 234577889999988764 46778899998888899999988887777777 477755443
Q ss_pred HHhhccCCCCCcc--ccccchHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 018271 297 IYDNVASGEGNSC--NGTHCFMLSFLIMASVAFVGCLVAFLLFIRTR 341 (358)
Q Consensus 297 l~~~~g~~~~~~~--~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 341 (358)
+ ...+.++-.+- .--+.|..+-|+++++.++.++...+..+|..
T Consensus 188 f-~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 188 F-TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred H-hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 3 22332211000 12223778888889888888877766665543
No 220
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.59 E-value=4e-06 Score=81.03 Aligned_cols=182 Identities=13% Similarity=0.064 Sum_probs=122.1
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHH-h-cCCCch------h----hHHHHHHHHHHHHHhhhHhHHHHHHHhhhcC
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGE-S-LGYPTS------A----INSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 211 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~-~G~s~~------~----a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~ 211 (358)
+.+|.+++..++.+.+.+.+..+...++. + ++-++. + ..+...+.++.+.+..++.-++.+|+|
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g---- 333 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWG---- 333 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 67888999999888888777776666554 2 232211 1 123334444554555555555555553
Q ss_pred CchHHHHHHHHHHHHHHHHHHH-hcC---------------------chhHHHHHHHHHhhhhcccccHHHHHHHhhCC-
Q 018271 212 WERPSFIAITLATMSVGHIVVA-SGF---------------------PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV- 268 (358)
Q Consensus 212 ~gr~~~~~~~~~~~~~~~~l~~-~~~---------------------~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~- 268 (358)
+||....++.++.++++.... ..+ ....++...+.|+..+..+++-++++++.-++
T Consensus 334 -~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~ 412 (477)
T TIGR01301 334 -AGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNL 412 (477)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcccc
Confidence 245665666666665554432 111 14466777889999999999999999999885
Q ss_pred -cchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 018271 269 -GHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTR 341 (358)
Q Consensus 269 -~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 341 (358)
++.|..+|+.|.+..+... +..+..|.+.+..|+. -..++.+.++.++++++.++++.++.+
T Consensus 413 ~~~~G~~mgilN~~I~lpQi-i~sl~~g~~~~~~g~~----------~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 413 GAGQGLSMGVLNLAIVIPQI-IVSLGSGPWDQLFGGG----------NLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred CCCCcchhhHHHHHHHHHHH-HHHHHHHHHHHHcCCC----------CeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 4569999999999999995 5666777766666641 456788888888888887776665543
No 221
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.59 E-value=1.1e-06 Score=77.38 Aligned_cols=128 Identities=15% Similarity=0.055 Sum_probs=91.5
Q ss_pred hhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH--
Q 018271 156 GMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-- 233 (358)
Q Consensus 156 ~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-- 233 (358)
..+..|.+..+-|++-+.+|+|.++...+.+...++..+| ++.|.+.|++ +.+..+.++.+...++...+.
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~------gp~~~l~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF------GPWVVLLIGAVLGFVGYGLLWLA 86 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc------chHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677888889999999999999999999999998875 7889999999 666777777777777776543
Q ss_pred hcC------chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhH
Q 018271 234 SGF------PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 291 (358)
Q Consensus 234 ~~~------~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp 291 (358)
... .+.+.+..++.|.+.+...........+.|| ++||++.|+.-...++++.++..
T Consensus 87 ~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~ 149 (250)
T PF06813_consen 87 VSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQ 149 (250)
T ss_pred HhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHH
Confidence 111 1223333344444433333444444557887 68999999998888888876654
No 222
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.59 E-value=5.5e-06 Score=75.76 Aligned_cols=165 Identities=13% Similarity=0.054 Sum_probs=110.7
Q ss_pred hhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhcCc
Q 018271 158 GSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFP 237 (358)
Q Consensus 158 ~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~~~ 237 (358)
.+.+.-..++-.+.+++|++..+.+.+.......+.+..++.|.++||+ |||...++..++..+.++.-..++.
T Consensus 48 ~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~------Grk~~cl~~cily~~scl~k~~~~~ 121 (354)
T PF05631_consen 48 AADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY------GRKKACLLFCILYSLSCLTKHSSNY 121 (354)
T ss_pred HHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CchHHHHHHHHHHHHHHHHHhcccc
Confidence 3333333344455678899999999998888888888888899999999 5666666666666666665556778
Q ss_pred hhHHHHHHHHHhhhhcccccHHHH-HHHh----hCCcchHHHHHHHH-HHhhhHHHHHhHHHHHHHHhhccCCCCCcccc
Q 018271 238 GNLYVGSIIVGVCYGCQWSLMPTI-TYEI----FGVGHMGTIFNTIA-IASPVGSYVCSVRIIGYIYDNVASGEGNSCNG 311 (358)
Q Consensus 238 ~~l~~~~~l~g~~~g~~~~~~~~~-~~e~----f~~~~~g~~~g~~~-~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g 311 (358)
..+++.+++.|++....++..-+. +.|. ||.+..+..++.+. ..+.+-+ +.+.+++-++.+..+.
T Consensus 122 ~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vA-I~aGv~a~~l~~~~~~-------- 192 (354)
T PF05631_consen 122 PVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVA-IGAGVVANVLADWFGF-------- 192 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHH-HHHhHHHHHHHHHhCC--------
Confidence 889999999999888776665443 4444 44444555555554 3444444 4555666666666551
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 312 THCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 312 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
+...+|.....+.+++.++......|
T Consensus 193 --g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 193 --GPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred --CCcchHHHHHHHHHHHHHHHHhcccc
Confidence 03678888777777777654433333
No 223
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.58 E-value=5.8e-05 Score=73.79 Aligned_cols=173 Identities=10% Similarity=0.011 Sum_probs=104.9
Q ss_pred hhHHhcHHHHHHh-c-----CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcC-CchHHHHHHHHHHHHHHHHH--
Q 018271 161 LATVNNISQIGES-L-----GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG-WERPSFIAITLATMSVGHIV-- 231 (358)
Q Consensus 161 ~~~~~~l~~~~~~-~-----G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~-~gr~~~~~~~~~~~~~~~~l-- 231 (358)
....+.++.+.++ . |+.. ...++.++..+..++..++.+++.||.++|+. .....-+.+++++.+++++.
T Consensus 286 ~q~~~~l~l~~~~~~~~~~~G~~i-~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~ 364 (489)
T PRK10207 286 AQMPTSLNFFAINNVHHEILGFSI-NPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAA 364 (489)
T ss_pred HHcccHHHHHHHHhccccccceEE-CHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 3344566666653 2 2221 23445555666677788888999999976641 11112234444444444421
Q ss_pred -----HH-h---cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhcc
Q 018271 232 -----VA-S---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 232 -----~~-~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g 302 (358)
.. . .+.+++....++.|++.+...+....++.+..|++.+|.++|+.++...+|+. +|..+++.......
T Consensus 365 ~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~-lg~~l~~~~~~~~~ 443 (489)
T PRK10207 365 AAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFL-LGGYVATFTAVPDN 443 (489)
T ss_pred HHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccccc
Confidence 11 1 12344566778899999999888899999999999999999999999999885 66555554421000
Q ss_pred CCCCCccc-cccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 303 SGEGNSCN-GTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 303 ~~~~~~~~-g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
. .+-. ....|.+.|...++.++++.++.+++.+
T Consensus 444 ~---~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 444 I---TDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred c---ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 0111677788888777776665544443
No 224
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.57 E-value=8.5e-10 Score=106.51 Aligned_cols=138 Identities=20% Similarity=0.257 Sum_probs=107.2
Q ss_pred hhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hc---CchhHHHHHHHHHhhhhccc
Q 018271 180 AINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SG---FPGNLYVGSIIVGVCYGCQW 255 (358)
Q Consensus 180 ~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~---~~~~l~~~~~l~g~~~g~~~ 255 (358)
..++..+...++..+|.++.|+++||+ |||+.+.++..+..++.++.. .+ +...+.+.+++.|++.|+..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~------GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY------GRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 457788999999999999999999999 667778888888888777766 45 67788889999999999999
Q ss_pred ccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 256 SLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 256 ~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
...+.++.|..|+++||...++.+.+..+|.. ++..+ ++...... +.+.||..+++..+..++..+..
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~-~~~~~-~~~~~~~~--------~~~~Wr~~~~~~~~~~l~~~~~~ 188 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGIL-LASLI-GYIVSYYS--------DNWGWRILLIFGAIPSLLVLLLR 188 (451)
T ss_pred cccccccccccccccccccccccccccccccc-ccccc-cccccccc--------ccccccccccccccccccccccc
Confidence 99999999999999999999999888888874 44433 33221111 11238888888777776655443
No 225
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.6e-07 Score=87.71 Aligned_cols=167 Identities=13% Similarity=0.001 Sum_probs=97.2
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH----hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcC
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE----SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 211 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~ 211 (358)
..+.+.|++.+.+..+.+....+..-.+..|.|.+.. -.|++..+..++..+...++.+|.+++|.++||+.++++
T Consensus 236 Dl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~ 315 (493)
T KOG1330|consen 236 DLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFP 315 (493)
T ss_pred HHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcc
Confidence 3445555555544444444443333344555564443 237777777777888999999999999999999877543
Q ss_pred C-chHHH---HHH-HHHHHHHHHHHHHhcCchh--HHHHHHHHHh-hhhcccccHHHHHHHhhCCcchHHHHHHHHHHhh
Q 018271 212 W-ERPSF---IAI-TLATMSVGHIVVASGFPGN--LYVGSIIVGV-CYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASP 283 (358)
Q Consensus 212 ~-gr~~~---~~~-~~~~~~~~~~l~~~~~~~~--l~~~~~l~g~-~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ 283 (358)
. +|... ... +..+.+..+++........ ..+..++.|. .....++....+..|..|+++|.+++++..+...
T Consensus 316 ~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h 395 (493)
T KOG1330|consen 316 NSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEH 395 (493)
T ss_pred cccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHH
Confidence 2 22211 111 1111222222222111122 2223333343 2234566666778889999999999999866665
Q ss_pred hHHHHHhHHHHHHHHhhcc
Q 018271 284 VGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 284 ig~~i~gp~i~g~l~~~~g 302 (358)
+-+-.-+|.+.|.+.|+.-
T Consensus 396 ~fgd~~~p~ivGilsd~l~ 414 (493)
T KOG1330|consen 396 IFGDAASPYIVGILSDKLR 414 (493)
T ss_pred HhccCCCcceehhHHHHhh
Confidence 5443466779999988753
No 226
>PRK09848 glucuronide transporter; Provisional
Probab=98.52 E-value=4.7e-06 Score=80.52 Aligned_cols=120 Identities=14% Similarity=0.134 Sum_probs=75.2
Q ss_pred HHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHH-HHhc---Cc
Q 018271 163 TVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIV-VASG---FP 237 (358)
Q Consensus 163 ~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l-~~~~---~~ 237 (358)
...+++.|.+ ..|++..+++.+.++..+...+..++.|+++||.++|+. .||+.+..+.+...+..++ +..+ +.
T Consensus 27 ~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~G-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (448)
T PRK09848 27 GALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWG-KFRPFLLFGTAPLMIFSVLVFWVPTDWSH 105 (448)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCc-CchHHHHHHHHHHHHHHHHHHhCcCCCCc
Confidence 3334444555 559999999999999999999999999999999877653 3444544444433333333 2221 11
Q ss_pred h----hHHHHHHHHHhhhhcccccHHHHHHHhhCC-cchHHHHHHHHHHhh
Q 018271 238 G----NLYVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFNTIAIASP 283 (358)
Q Consensus 238 ~----~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~-~~~g~~~g~~~~~~~ 283 (358)
. ...+..++.+++++.......++..++... ++|....++-..+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~ 156 (448)
T PRK09848 106 SSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAAS 156 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHH
Confidence 1 123334566667776666666666666644 567776655544333
No 227
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.51 E-value=5.1e-06 Score=79.16 Aligned_cols=177 Identities=10% Similarity=0.061 Sum_probs=123.0
Q ss_pred HHhhhhhhhHHhcHHHHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHH
Q 018271 154 LCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVV 232 (358)
Q Consensus 154 ~~~~~~~~~~~~~l~~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~ 232 (358)
+...+..-....++..+..+ .|+++..++.++.+.=+..++.-|+.|.++||..+|++ .||+.++.+.+..++..+++
T Consensus 22 ~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~G-rfRP~lL~g~ip~~i~~~l~ 100 (467)
T COG2211 22 FASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWG-RFRPWLLWGAIPFAIVAVLL 100 (467)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccc-cccHHHHHHhHHHHHHHHHH
Confidence 33333444455567766665 59999999999999999999999999999999876665 55666777766666666655
Q ss_pred H-hcC----c--hhHHHHHHHHHhhhhcccccHHHHHHHhhC-CcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCC
Q 018271 233 A-SGF----P--GNLYVGSIIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 304 (358)
Q Consensus 233 ~-~~~----~--~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~-~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~ 304 (358)
. .++ . ...++..++.++++..+.....++.+|+.. +++|.+..++-..+..+|.+ +...+.+.+....+.+
T Consensus 101 F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~-l~~~~~~plv~~~g~~ 179 (467)
T COG2211 101 FITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGL-LVAVLFPPLVKLFGGG 179 (467)
T ss_pred HcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCC
Confidence 5 332 1 224456678888888888788888888875 47899999998888888875 4455666666655531
Q ss_pred CCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 305 EGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 305 ~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
+ ...+|+....+++++..+..+.++.-.
T Consensus 180 ~-----~~~g~~~~~~~~~vi~~i~~l~~~~~v 207 (467)
T COG2211 180 D-----KALGYQGTALVLGVIGVILLLFCFFNV 207 (467)
T ss_pred c-----chhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 022477777777776666665554443
No 228
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.48 E-value=6.6e-06 Score=80.72 Aligned_cols=155 Identities=12% Similarity=0.030 Sum_probs=101.2
Q ss_pred hHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcC---------chhHHHHHHHHHhh
Q 018271 181 INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGF---------PGNLYVGSIIVGVC 250 (358)
Q Consensus 181 a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~---------~~~l~~~~~l~g~~ 250 (358)
.+++.++..+...+..++.+++-+|.++|. +....+.+++++.+++++.+. ..+ .+++....++.|++
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~--~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~g 395 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRL--PMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIG 395 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCC--CcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHH
Confidence 456666777777777777777777765553 344556677777777766543 211 33567778899999
Q ss_pred hhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCcccc-ccchHHHHHHHHHHHHHH
Q 018271 251 YGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNG-THCFMLSFLIMASVAFVG 329 (358)
Q Consensus 251 ~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g-~~~~~~~f~~~~~~~~~~ 329 (358)
.+...+....++.+..|++.||..+|+..++..+|+. ++..+.+....... ..+... ...+.+.|...++.+++.
T Consensus 396 e~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~-~~g~~~~~~~~~~~---~~~~~~~~~~~~~~f~~~~~~~~~~ 471 (500)
T PRK09584 396 ELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAAL-IAGYVANLMAVPDN---VTDPLMSLEVYGRVFLQIGIATAVI 471 (500)
T ss_pred HHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccccc---cccchhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888877774 44333332211000 000000 112778888888777766
Q ss_pred HHHHHHHHHHhH
Q 018271 330 CLVAFLLFIRTR 341 (358)
Q Consensus 330 ~~~~~~~~~~~~ 341 (358)
+++.+++.+..+
T Consensus 472 a~~~~~~~~~~~ 483 (500)
T PRK09584 472 AVLMLLTAPKLN 483 (500)
T ss_pred HHHHHHHHHHHH
Confidence 655555444433
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.32 E-value=1.4e-05 Score=74.29 Aligned_cols=131 Identities=17% Similarity=0.140 Sum_probs=94.8
Q ss_pred HHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHH-----H-hc-------C
Q 018271 170 IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVV-----A-SG-------F 236 (358)
Q Consensus 170 ~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~-----~-~~-------~ 236 (358)
+..|++.+..-.+.++++..+.+.. |+.+|+.||+.+.-..++|.+.+..+..+.+.+..+. . .. +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap~-R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAPL-RVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHH-HHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 3457888888888888888887664 9999999999752233345555555555544433322 1 12 1
Q ss_pred ch----hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhcc
Q 018271 237 PG----NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 237 ~~----~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g 302 (358)
.+ ...+...+.|++.+...+...++..|..++++|++..++.....-+|- +++..+.|.+.+.+.
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~-iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGI-IVSAIVFGRLLDPFS 153 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHH-HHHHHHHHHHccccC
Confidence 11 133456788888888888889999999999999999999988877777 578889999888765
No 230
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.29 E-value=1.5e-05 Score=73.06 Aligned_cols=136 Identities=11% Similarity=0.125 Sum_probs=97.1
Q ss_pred hhHHhcHHHHH-HhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCch
Q 018271 161 LATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPG 238 (358)
Q Consensus 161 ~~~~~~l~~~~-~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~ 238 (358)
..+.+..+.+. +.+|+++.+.+-+.+..++.+.+-+.......||.. . .-+..+.....++.-..+++. ...+.
T Consensus 278 s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~---~-~~~a~l~~~l~~~vP~~llls~~~~~~ 353 (451)
T KOG2615|consen 278 SGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYK---G-NIKAVLLFSLLLIVPAFLLLSLARTPV 353 (451)
T ss_pred HHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccc---c-chhhHHHHHHHHHHHHHHHHhccccch
Confidence 34444444443 466999999999888888877777777676666652 1 133344444444444444444 45566
Q ss_pred hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhc
Q 018271 239 NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 301 (358)
Q Consensus 239 ~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~ 301 (358)
.++....+..+......+....++....|.++||+..|+....+.++-+ +||.+.|.+..+.
T Consensus 354 ~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRa-iGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 354 VLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARA-IGPLVSGVIFSWS 415 (451)
T ss_pred hhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHH-hhhhhhheeEEEe
Confidence 6777778888877777777788888999999999999999999999995 8999999887654
No 231
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.24 E-value=2.3e-05 Score=75.33 Aligned_cols=159 Identities=19% Similarity=0.139 Sum_probs=110.5
Q ss_pred cHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hc----CchhH
Q 018271 166 NISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SG----FPGNL 240 (358)
Q Consensus 166 ~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~----~~~~l 240 (358)
..|.+-+++|+++++...+.++..+.-.+ .++.|.++|-+.-+.. +||+.++++.++..++.+.++ .+ +....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~-rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGY-RRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCC-cchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 34455567899999988888888887665 7788999998743322 566666666666655444443 22 22334
Q ss_pred HHHHHHHHhhhhcccccHHHHHHHhhCC--cchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHH
Q 018271 241 YVGSIIVGVCYGCQWSLMPTITYEIFGV--GHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLS 318 (358)
Q Consensus 241 ~~~~~l~g~~~g~~~~~~~~~~~e~f~~--~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~ 318 (358)
.+..++..++....-.+.-+.+.|.-.. +.+|...++......+|+ +++..+.|.+.+..+ ++..
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~-lv~~~l~G~l~~~~~------------~~~~ 156 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGS-LVGSLLSGPLLDSFG------------PQGV 156 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHH-HHHHHhhhhhhhcCC------------CeEE
Confidence 4455566666666666666777777632 337888888888888898 478889999998876 7888
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 018271 319 FLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 319 f~~~~~~~~~~~~~~~~~~~~ 339 (358)
|.+.+.+.++..+..+++.+|
T Consensus 157 f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 157 FLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred ehHHHHHHHHHHHHHHHhhhh
Confidence 888887777776666555554
No 232
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.22 E-value=3e-06 Score=74.62 Aligned_cols=67 Identities=37% Similarity=0.526 Sum_probs=60.7
Q ss_pred CeeeeeecCC-----CCcchhhhHHHHHHHHHHHHHHHHHHHHhhcccCchhHHHHHHHHHHHHHhhhhHHh
Q 018271 1 MSLVRIHGTN-----SADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIA 67 (358)
Q Consensus 1 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~i~ 67 (358)
|.++|++++. +++|+++|..++++++.+++|+++.++++++.+.+++..+...++++++++.|+.+|
T Consensus 178 ~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~llL~~Pl~i~ 249 (250)
T PF06813_consen 178 MFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLLLLLLPLAIP 249 (250)
T ss_pred hhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 4678999752 479999999999999999999999999999999999999998888899999999887
No 233
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.19 E-value=0.00021 Score=71.45 Aligned_cols=74 Identities=18% Similarity=0.148 Sum_probs=63.7
Q ss_pred cccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHH-HHHHhhhHhHHHHHHHh
Q 018271 134 DMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSI-WNFLGRFGGGYVSDIVL 207 (358)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i-~~~~g~~~~G~lsDr~~ 207 (358)
..+.+++++|+.+....++..+......++.+++|-|++ ++|.+.+.+..++....+ +.++|.+++|++.-|+.
T Consensus 382 p~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 382 PKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeec
Confidence 446788999999999999999988888999999999998 569999999999876665 56788999999988873
No 234
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.15 E-value=0.00026 Score=63.09 Aligned_cols=150 Identities=15% Similarity=0.187 Sum_probs=102.4
Q ss_pred hhHHhcHHHHHHhcCCCc--hhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcC-
Q 018271 161 LATVNNISQIGESLGYPT--SAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGF- 236 (358)
Q Consensus 161 ~~~~~~l~~~~~~~G~s~--~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~- 236 (358)
.......+.+..+.+.+. ...++..+...+...++.++.|.++||+ |||..+..+.....++.++.. ..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~------g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (338)
T COG0477 19 GLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY------GRRKVLIIGLLLFLLGTLLLALAPNV 92 (338)
T ss_pred chHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc------cchHHHHHHHHHHHHHHHHHHhCccc
Confidence 344456667777766655 3678888899999999999999999999 444444444433333333333 233
Q ss_pred -chhHHHHHHHHHhhhhcccccHHHHHHHhhCC-cchHHHHHHHHH-HhhhHHHHHhHHHHHHHHhhccCCCCCcccccc
Q 018271 237 -PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFNTIAI-ASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTH 313 (358)
Q Consensus 237 -~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~-~~~g~~~g~~~~-~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~ 313 (358)
...+.+.+...|++.+...+...+++.|.+|. +.++...+.... ...+|. +++|.+++.+... .. .
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~---------~ 161 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGL-ALGPLLAGLLLGA-LL---------W 161 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-Hh---------c
Confidence 44566666778888888888889999999997 678888888877 466677 5788777777765 21 1
Q ss_pred chHHHHHHHHHHHH
Q 018271 314 CFMLSFLIMASVAF 327 (358)
Q Consensus 314 ~~~~~f~~~~~~~~ 327 (358)
.|+..|........
T Consensus 162 ~~~~~~~~~~~~~~ 175 (338)
T COG0477 162 GWRAAFLLAALLGL 175 (338)
T ss_pred chHHHHHHHHHHHH
Confidence 18886655554443
No 235
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.06 E-value=3.4e-05 Score=74.35 Aligned_cols=131 Identities=14% Similarity=0.165 Sum_probs=97.3
Q ss_pred HHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhh--hhcccccHHHHHHHhh
Q 018271 189 SIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVC--YGCQWSLMPTITYEIF 266 (358)
Q Consensus 189 ~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~--~g~~~~~~~~~~~e~f 266 (358)
.+...+..+..|.++||+ |||..+........+..+...... +++++ +.++. .+..++...++++|..
T Consensus 72 ~~~~~i~s~~iG~lSD~~------grk~~L~~~~~~~~l~~~~~~~~~-~~~~~---~~~l~g~~~~~~s~~~a~vadis 141 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRY------GRKVVLLLPLFGTILPALCLLFQG-YWFFL---LLGLSGGFSAIFSVGFAYVADIS 141 (463)
T ss_pred HHHHHHHHhhhHHhhhhh------hhhhhHHHHHHHHHHhHHHHHHHH-HHHhh---hcccccchhhhhhhhhhheeecc
Confidence 577788899999999999 677777766666665555444333 22222 33332 3345667788999999
Q ss_pred CCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 018271 267 GVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRR 342 (358)
Q Consensus 267 ~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 342 (358)
..+.|...+|+.+.....+.. .+|.+++++....+ +...|.+..+..+++.+-..+..+|+..
T Consensus 142 ~~~~R~~~~gll~~~~~~~~~-~~p~~~~~~~~~~~------------~a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGLV-IGPALGGYLVKFLG------------IALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred chhHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHhcC------------chHHHHHHHHHHHHHHHHHhhccccccC
Confidence 999999999999987777774 78999999999877 8899999988888887766666665543
No 236
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.05 E-value=4.4e-05 Score=54.43 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=49.3
Q ss_pred HHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHh
Q 018271 151 VAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVL 207 (358)
Q Consensus 151 ~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~ 207 (358)
..+++..++...+..++|.+.++.|++..+.+.+.++..+...++++++|+++||++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~ 63 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFG 63 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 344555555566778899999999999999999999999999999999999999995
No 237
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.00 E-value=0.00054 Score=64.48 Aligned_cols=142 Identities=8% Similarity=0.021 Sum_probs=81.2
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhc---CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCC
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL---GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 212 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~ 212 (358)
..++..+++..+...+...+...+++-..++...+-++. +-+..--|..-++..+.+.++.+..|++..++.+.
T Consensus 239 ~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~--- 315 (412)
T PF01770_consen 239 DFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW--- 315 (412)
T ss_pred HHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH---
Confidence 345556666553333333333344444555555555544 22333346667777888888999999986666321
Q ss_pred chHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHH
Q 018271 213 ERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIA 281 (358)
Q Consensus 213 gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~ 281 (358)
+ ...+.+..++.+..++++. ..+.+..++..++++..+-...++...-++.....+..|..+|+-...
T Consensus 316 ~-~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 316 G-ELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFV 384 (412)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHH
Confidence 1 2223333344444444444 456666777777777766666666666666666667777777665443
No 238
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.88 E-value=2.7e-06 Score=83.65 Aligned_cols=168 Identities=14% Similarity=0.045 Sum_probs=0.0
Q ss_pred cccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHH-HHHHhhhHhHHHHHHHhhhcC
Q 018271 134 DMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSI-WNFLGRFGGGYVSDIVLHRMG 211 (358)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i-~~~~g~~~~G~lsDr~~~k~~ 211 (358)
....+++++|+.+....++..+......++.+++|.|++ +++.+++++++++....+ ++++|.+++|++..|+.-+..
T Consensus 295 ~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~ 374 (539)
T PF03137_consen 295 PKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSAR 374 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHH
Confidence 346788999999998888888888888899999999998 569999999998876665 678899999999998843311
Q ss_pred CchHHHHHHHHHHHHHH---HHHHH--------h-cCc-------------------------------------hhH--
Q 018271 212 WERPSFIAITLATMSVG---HIVVA--------S-GFP-------------------------------------GNL-- 240 (358)
Q Consensus 212 ~gr~~~~~~~~~~~~~~---~~l~~--------~-~~~-------------------------------------~~l-- 240 (358)
+...+..+..++..+. .+++. . ..+ ..+
T Consensus 375 -~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~ 453 (539)
T PF03137_consen 375 -GAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIP 453 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -HHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHH
Confidence 1111111111111111 11110 0 000 001
Q ss_pred -HHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhcc
Q 018271 241 -YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 241 -~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g 302 (358)
++..++.-+..+........++-...++++|+.+.|+..+..++-+.+-||++.|.+.|+.-
T Consensus 454 Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~tC 516 (539)
T PF03137_consen 454 FLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDSTC 516 (539)
T ss_dssp ---------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhhh
Confidence 11111111222222222333444667889999999999888777555899999999999753
No 239
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.83 E-value=0.001 Score=54.24 Aligned_cols=107 Identities=7% Similarity=-0.058 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHH
Q 018271 184 LVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITY 263 (358)
Q Consensus 184 ~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~ 263 (358)
-.++......+..++.+.+.+++ +.|+.+.++.+..++.......++.+.++...++.|++.+..|.....++.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~l------g~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt 115 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKL------GPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLT 115 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHH------hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHH
Confidence 34555566677777888888998 677888888777776555555566677888899999999999999999999
Q ss_pred HhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHH
Q 018271 264 EIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 297 (358)
Q Consensus 264 e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l 297 (358)
+...++.+++..|+.-.....+. ++|.++.-.+
T Consensus 116 ~~s~~~~~~~~~~ifw~i~~~s~-i~G~~~~~~~ 148 (156)
T PF05978_consen 116 SYSTEETIGRNTGIFWAIFQSSL-IFGNLFLFFI 148 (156)
T ss_pred HcCCHHHHhhHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 98888889998888866666665 4555443333
No 240
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.80 E-value=0.00074 Score=63.54 Aligned_cols=149 Identities=13% Similarity=0.058 Sum_probs=94.4
Q ss_pred chhHHHHHHHHHHhhhhh-hhHHhcHH--HHHHh-cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH
Q 018271 143 TLNFWLLFVAMLCGMGSG-LATVNNIS--QIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 218 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~-~~~~~~l~--~~~~~-~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~ 218 (358)
.++-|.+++.+.+...+. ..++.+-+ .+.+. +| +...+-|+..++.+.++.-.+.+-|+.|++ |-|..+
T Consensus 40 y~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~------GLR~a~ 112 (480)
T KOG2563|consen 40 YPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF------GLRTAL 112 (480)
T ss_pred chhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc------chHHHH
Confidence 355576666555444332 22333332 23443 37 666677888899999999999999999999 677778
Q ss_pred HHHHHHHHHHHHHHH--hcC-----ch--hHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHH
Q 018271 219 AITLATMSVGHIVVA--SGF-----PG--NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVC 289 (358)
Q Consensus 219 ~~~~~~~~~~~~l~~--~~~-----~~--~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~ 289 (358)
.++.++.+++..+=. ... .+ ....+-.+.+...-....+-.-+..-+||+++|+++..+..+++.+|.. +
T Consensus 113 llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGva-v 191 (480)
T KOG2563|consen 113 LLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVA-V 191 (480)
T ss_pred HHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHH-H
Confidence 888888888776532 111 11 1223444444444444444445666789999999999998888888774 5
Q ss_pred hHHHHHHHHh
Q 018271 290 SVRIIGYIYD 299 (358)
Q Consensus 290 gp~i~g~l~~ 299 (358)
|-++...+..
T Consensus 192 g~llppilV~ 201 (480)
T KOG2563|consen 192 GFLLPPILVP 201 (480)
T ss_pred HhhccceecC
Confidence 5444444443
No 241
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.79 E-value=0.0019 Score=62.85 Aligned_cols=147 Identities=16% Similarity=0.028 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-h-cCchh-HHHHHHHHHhhhhcccccH
Q 018271 182 NSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-S-GFPGN-LYVGSIIVGVCYGCQWSLM 258 (358)
Q Consensus 182 ~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~-~~~~~-l~~~~~l~g~~~g~~~~~~ 258 (358)
++..++..+...+-.|+.|-++|+-+ .||+++.+...+..+...++. . ++.+. ..+..++.-++++......
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~-----~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfy 147 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGG-----RRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFY 147 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccc-----cchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567777888888999999999875 445555555555555555444 2 33333 2333344446677777788
Q ss_pred HHHHHHhhCCcch--------------------------HHHHHHHHHHhhhHHHHHhHHHHHHH-HhhccCCCCCcccc
Q 018271 259 PTITYEIFGVGHM--------------------------GTIFNTIAIASPVGSYVCSVRIIGYI-YDNVASGEGNSCNG 311 (358)
Q Consensus 259 ~~~~~e~f~~~~~--------------------------g~~~g~~~~~~~ig~~i~gp~i~g~l-~~~~g~~~~~~~~g 311 (358)
.++.+|+.+++.+ ++..|.....+.+|+. + .++.... ....+.. -.+
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~-v-~l~i~l~~~~~~~~~----~~~ 221 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGL-V-ALLISLLLVISPGST----ASN 221 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHH-H-HHHHHHHHHHcCCCc----ccc
Confidence 8999999998888 8888888888888885 3 3333332 2222221 001
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 312 THCFMLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 312 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
....|.++.+.++..++..+..+++.++
T Consensus 222 ~~~~r~~~~~~a~ww~vfsiP~~~~~~~ 249 (477)
T PF11700_consen 222 TWAIRVAFLIVALWWLVFSIPLFLWLPD 249 (477)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2236888888888777776665555433
No 242
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.76 E-value=1.2e-05 Score=70.82 Aligned_cols=153 Identities=17% Similarity=0.156 Sum_probs=110.8
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcH--HH-HHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNI--SQ-IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAI 220 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l--~~-~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~ 220 (358)
+++..+.+++++..++++.+..-- .. +-.+.+.+.++..++.+.++..+++-++++|++.||.. +-|+..++
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~f-----gir~gtii 115 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRF-----GIRLGTII 115 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhh-----hhhHHHHH
Confidence 567777778887777766554321 11 11244566667788889999999999999999999862 55555555
Q ss_pred HHHHHHHHHHHHH----hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHH
Q 018271 221 TLATMSVGHIVVA----SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGY 296 (358)
Q Consensus 221 ~~~~~~~~~~l~~----~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~ 296 (358)
..++..++.+.++ ....+.+...++++|++.-..-.....++.-.|..+..+.++|+.....++|+ ...-.+.++
T Consensus 116 ~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gs-tvNf~lm~~ 194 (459)
T KOG4686|consen 116 LCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGS-TVNFLLMPF 194 (459)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhc-eeeeeecHH
Confidence 5555556666554 23456778889999987665555667788888888999999999999999999 467777888
Q ss_pred HHhhcc
Q 018271 297 IYDNVA 302 (358)
Q Consensus 297 l~~~~g 302 (358)
++|..+
T Consensus 195 ly~~~~ 200 (459)
T KOG4686|consen 195 LYDTMG 200 (459)
T ss_pred HHHHHH
Confidence 888665
No 243
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.63 E-value=0.017 Score=56.31 Aligned_cols=154 Identities=13% Similarity=0.031 Sum_probs=92.4
Q ss_pred hhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcC-CchHHHHHHHHHHHHHHHHHHH----h------cCchhHHHHHHHHH
Q 018271 180 AINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG-WERPSFIAITLATMSVGHIVVA----S------GFPGNLYVGSIIVG 248 (358)
Q Consensus 180 ~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~-~gr~~~~~~~~~~~~~~~~l~~----~------~~~~~l~~~~~l~g 248 (358)
..+++-++..+.-++..|+.+++=.|..+|+. .....=..+++++.+++.+.+. . .+..++++..++++
T Consensus 309 p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t 388 (493)
T PRK15462 309 PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMG 388 (493)
T ss_pred CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 35677788888888888888888667644321 1111113455555555554332 1 13345666777888
Q ss_pred hhhhcccccHHHHHHHhhCCcchHHHHHHHHHHh-hhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHH
Q 018271 249 VCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIAS-PVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAF 327 (358)
Q Consensus 249 ~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~-~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~ 327 (358)
++.-...++..+.++++.|++.+|..+|...+.. .+|+. ++..+.+...+....++.........|...|...+...+
T Consensus 389 ~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 467 (493)
T PRK15462 389 FAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANY-LAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGAL 467 (493)
T ss_pred HHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHH
Confidence 8888888999999999999999999999996643 56663 444444433211000000000012237788888887766
Q ss_pred HH-HHHHH
Q 018271 328 VG-CLVAF 334 (358)
Q Consensus 328 ~~-~~~~~ 334 (358)
+. .++.+
T Consensus 468 ~~~~~~~~ 475 (493)
T PRK15462 468 ACVGVVLM 475 (493)
T ss_pred HHHHHHHH
Confidence 66 44433
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.61 E-value=0.0049 Score=59.61 Aligned_cols=145 Identities=12% Similarity=0.068 Sum_probs=83.9
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCC-----CchhhHHHHHHHHHHHHHh-hhHhHHHHHHHhhhcCCchHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGY-----PTSAINSLVSLWSIWNFLG-RFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~-----s~~~a~~~~~~~~i~~~~g-~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
++++.+.+.+||..+.++. +-.+=...++ +.+...++.+...+...+. .++.+++++|+ +|+.+
T Consensus 7 ~k~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~------~~~~l 76 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL------SKEAL 76 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC------CHHHh
Confidence 4566666666666644432 2222222334 3345666666555555554 88899999999 44444
Q ss_pred HHHHHHHHHHHHHHHH---hc--C---------------------------chhHHHHHHHHHhhhhcccc-cHHHHHHH
Q 018271 218 IAITLATMSVGHIVVA---SG--F---------------------------PGNLYVGSIIVGVCYGCQWS-LMPTITYE 264 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~---~~--~---------------------------~~~l~~~~~l~g~~~g~~~~-~~~~~~~e 264 (358)
.......+...+.+++ .+ + .|...+..+...+......+ +.+.++.|
T Consensus 77 f~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fand 156 (472)
T TIGR00769 77 FYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQ 156 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4333333333222221 11 1 11111111222222233344 67899999
Q ss_pred hhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHh
Q 018271 265 IFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 299 (358)
Q Consensus 265 ~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~ 299 (358)
.+..++-.+-+++.++++++|. ++++.+..++.+
T Consensus 157 i~t~~qakRfy~l~~~ganlg~-i~sg~~~~~~~~ 190 (472)
T TIGR00769 157 ITTIDEAKRFYALFGLGANVAL-IFSGRTIKYFSK 190 (472)
T ss_pred cCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 9999999999999999999999 478877777664
No 245
>PRK03612 spermidine synthase; Provisional
Probab=97.57 E-value=0.0087 Score=58.93 Aligned_cols=159 Identities=17% Similarity=0.206 Sum_probs=85.9
Q ss_pred HhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH-HHHHHHH-HHHHH-H
Q 018271 155 CGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF-IAITLAT-MSVGH-I 230 (358)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~-~~~~~~~-~~~~~-~ 230 (358)
+..++...+......++. -+|-+....+.+++++..+..+|..+++++.++. .++.. +-+...+ ..+.. +
T Consensus 25 ~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~------~~~~~~~e~~i~l~~~~~~~l 98 (521)
T PRK03612 25 VCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA------AAGFVAVELLLALLGGLSALI 98 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHHHHHHH
Confidence 333333444433333333 4588888888899999999999999988876433 12211 1111111 11111 1
Q ss_pred HHHhcC----c-hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHH-hhccCC
Q 018271 231 VVASGF----P-GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIY-DNVASG 304 (358)
Q Consensus 231 l~~~~~----~-~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~-~~~g~~ 304 (358)
+..... . ..++...++.++..|...++...+..+.. .++.|...|-....+.+|+ ++|.++.|++. ...|
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa-~~G~l~~~~vLlp~lG-- 174 (521)
T PRK03612 99 LYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGA-LVGGLAFPFLLLPRLG-- 174 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHH-HHHHHHHHHHHHHhcc--
Confidence 111111 1 11233445566677766665554444321 2235677788888888888 47888888765 4666
Q ss_pred CCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 305 EGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 305 ~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
-..+.++.+.+.++++++.
T Consensus 175 ----------~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 175 ----------LIRTAALTGSLNLLAALVF 193 (521)
T ss_pred ----------hHHHHHHHHHHHHHHHHHH
Confidence 4444445555555444333
No 246
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.52 E-value=0.0047 Score=59.47 Aligned_cols=120 Identities=14% Similarity=0.075 Sum_probs=71.0
Q ss_pred CCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-----------hcCchhHHHHH
Q 018271 176 YPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-----------SGFPGNLYVGS 244 (358)
Q Consensus 176 ~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-----------~~~~~~l~~~~ 244 (358)
++....+.+..+.+++..+|..+.. ++.++. .-|.++....++.++..+.-. .++.+..+.-.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~----~~~~~~--~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~ 325 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYR----KYFSNW--SWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDT 325 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHH----HHHhCC--CHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhH
Confidence 7776666666555566666555544 444433 334444444444443332210 01111111222
Q ss_pred HHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhcc
Q 018271 245 IIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 245 ~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g 302 (358)
++..+..+..+-.....++|+.|+..-|+.+++.....++|.. ++..++..+.+..+
T Consensus 326 ~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~-~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 326 ILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSS-VSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC
Confidence 3444444444445556789999999999999999999999984 78888888887776
No 247
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.46 E-value=0.02 Score=54.98 Aligned_cols=146 Identities=13% Similarity=0.074 Sum_probs=89.1
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHH---hcCCCchh-hHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCC
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE---SLGYPTSA-INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 212 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~G~s~~~-a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~ 212 (358)
..+++++++...+...++........+....|+... ..+.+... .+.......++..++....+.+++|..+ .
T Consensus 233 ~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~---f 309 (461)
T KOG3098|consen 233 TFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRG---F 309 (461)
T ss_pred HHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhh---c
Confidence 345566777766666555554444445555554433 22333222 2333344455666666667777777632 3
Q ss_pred chHHHHHHHHHHHHHHHHHHH--hcC-----------------chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHH
Q 018271 213 ERPSFIAITLATMSVGHIVVA--SGF-----------------PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGT 273 (358)
Q Consensus 213 gr~~~~~~~~~~~~~~~~l~~--~~~-----------------~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~ 273 (358)
||++.+.++..+..+..++.. .+. .....+..++.|++-+......+.++.+.+ +++|.+
T Consensus 310 g~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~ 388 (461)
T KOG3098|consen 310 GRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQ 388 (461)
T ss_pred ccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHH
Confidence 777777776666665555432 110 123455668888888888888899999999 588888
Q ss_pred HHHHHHHHhhhHH
Q 018271 274 IFNTIAIASPVGS 286 (358)
Q Consensus 274 ~~g~~~~~~~ig~ 286 (358)
+.++.-.-..+++
T Consensus 389 ~fsi~kfyq~~~s 401 (461)
T KOG3098|consen 389 AFSLFKFYQSVAS 401 (461)
T ss_pred HHHHHHHHHHHHH
Confidence 8888876666666
No 248
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.45 E-value=0.018 Score=55.79 Aligned_cols=128 Identities=16% Similarity=0.221 Sum_probs=96.9
Q ss_pred HHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhH-HHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHH
Q 018271 168 SQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGG-YVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGS 244 (358)
Q Consensus 168 ~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G-~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~ 244 (358)
+.+.+ .+|++..+.+.+.+..++.+.++.++.. .+.-.+ +-+..+..++....+....++ .++.+.++...
T Consensus 265 ~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l------~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~ 338 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSIL------GEKRLISLGLLSEFLQLLLFAFATETWMMFAAG 338 (463)
T ss_pred EEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hhhhHhhHHHHHHHHHHHHHHHhccchhhhHHH
Confidence 34444 5599999999999998988888888877 565556 444577778887888777777 45555555554
Q ss_pred HHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC
Q 018271 245 IIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 303 (358)
Q Consensus 245 ~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~ 303 (358)
.+. ...+...+...+.++.+.+++++|+.+++......+.+ +++|.+.+.++..+..
T Consensus 339 v~~-~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~-~~~~~~~~~i~~~t~~ 395 (463)
T KOG2816|consen 339 VVV-ALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSG-VVSPALYGNIFALTLD 395 (463)
T ss_pred HHH-HhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhh-hhhHHHHHHHHHHHHH
Confidence 444 34455667788889999999999999999999999999 4789999988766543
No 249
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.45 E-value=2.6e-05 Score=76.83 Aligned_cols=167 Identities=15% Similarity=0.185 Sum_probs=2.7
Q ss_pred HHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhcC------
Q 018271 163 TVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGF------ 236 (358)
Q Consensus 163 ~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~~------ 236 (358)
+...+.++-+.+++++++++++.+.+-+++.+..++..++.+|. +|.+++..+.++++++.++++.++
T Consensus 22 ~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~------hrprwig~g~~~~~~g~~l~~lPhf~~~~y 95 (539)
T PF03137_consen 22 VNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG------HRPRWIGIGALLMGLGSLLFALPHFLSGPY 95 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------CCcceeeecHHHHHHHHHHHhccHhhcCCC
Confidence 33456677778899999999999999999999999988888775 566667777777777666542100
Q ss_pred ---------------------------------------------chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcch
Q 018271 237 ---------------------------------------------PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHM 271 (358)
Q Consensus 237 ---------------------------------------------~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~ 271 (358)
...++++-++.|+|....+++..+|+=|..++++-
T Consensus 96 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~s 175 (539)
T PF03137_consen 96 SYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNS 175 (539)
T ss_dssp --------------------------------------------------------SSS---------------------
T ss_pred ccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccC
Confidence 01134455788888888999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCC------Ccccccc----chHHHHHHHHHHHHHHHHHHHHH
Q 018271 272 GTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEG------NSCNGTH----CFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 272 g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~------~~~~g~~----~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
+...|+......+|+. +|=+++|...+.+-.... ..-..+. .|...|.+.+.+.++.++..+.+
T Consensus 176 plYiGi~~~~~~lGPa-~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F 249 (539)
T PF03137_consen 176 PLYIGILYAMSILGPA-LGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF 249 (539)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred ccchhhhhHHhhccHH-HHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999888888884 676666665544321110 0111111 35566666777766666554444
No 250
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.43 E-value=0.00037 Score=63.99 Aligned_cols=97 Identities=6% Similarity=-0.029 Sum_probs=72.3
Q ss_pred cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCC----Cccc
Q 018271 235 GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEG----NSCN 310 (358)
Q Consensus 235 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~----~~~~ 310 (358)
.++..+++..++.|.|.+...+..+++++++.+++++++..++....+.+|+ +++|.+++.+......+.. ..-.
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~-~~gP~i~~~~i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGT-TVAPLFGGSLILSGAGDLSMQVATANA 86 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHH-HHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence 3456677888999999999999999999999999999999999999999999 5899999988854211000 0000
Q ss_pred cccchHHHHHHHHHHHHHHHHH
Q 018271 311 GTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 311 g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
..+.|+..|++.+.+.++.++.
T Consensus 87 ~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 87 EAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 0123888988777765555543
No 251
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.40 E-value=0.0044 Score=59.51 Aligned_cols=137 Identities=12% Similarity=0.061 Sum_probs=81.0
Q ss_pred HHHhhhchhH--HHHHHHHHHhhhhhhhHHhcHHHHHHhcCCC-chhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCc
Q 018271 137 ILQSVCTLNF--WLLFVAMLCGMGSGLATVNNISQIGESLGYP-TSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWE 213 (358)
Q Consensus 137 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s-~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~g 213 (358)
+++..+|+.. |.+|.+ +...+++-..++...+-++..-+ ..--|..-++..+.+.+..+..|++-.++ .
T Consensus 255 ~~~~y~n~~vl~WSlWwa--~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w------~ 326 (511)
T TIGR00806 255 LVTIYRNPQLLLWSLWWV--FNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRW------A 326 (511)
T ss_pred HHHHhcCcchhhhhHHHH--HHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCc------h
Confidence 4455666544 444443 23333344444444444443211 11334555667777788888889886655 2
Q ss_pred h--HHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHH
Q 018271 214 R--PSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIA 281 (358)
Q Consensus 214 r--~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~ 281 (358)
+ ...+.+..++.+..++++. .++.+..++..++++..+....++....++.....+..|..+|+-+..
T Consensus 327 ~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfv 397 (511)
T TIGR00806 327 RWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFV 397 (511)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHH
Confidence 3 2333333344444444444 556677888888888888888888888888777777778777776543
No 252
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.29 E-value=0.056 Score=51.02 Aligned_cols=107 Identities=9% Similarity=0.010 Sum_probs=72.3
Q ss_pred chhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH----hcCchhHHHHHHHHHhhhhc
Q 018271 178 TSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA----SGFPGNLYVGSIIVGVCYGC 253 (358)
Q Consensus 178 ~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~----~~~~~~l~~~~~l~g~~~g~ 253 (358)
.....++...+.+|-.++|=-.-++ |+ .+.+++.+..++..+.+++-+ .++.+.+++.++..|+..|.
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri------r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa 351 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI------RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGA 351 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh------hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhH
Confidence 3455677778888877777543332 33 444555544444443333222 24455666778888998898
Q ss_pred ccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHH
Q 018271 254 QWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRI 293 (358)
Q Consensus 254 ~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i 293 (358)
.+.-....+.|..++++|--++|...++-.+|-. ++..+
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~-lAgll 390 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGIL-LAGLL 390 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHH-HHHHH
Confidence 8888888888888999999999999999988874 55443
No 253
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.25 E-value=0.0015 Score=61.47 Aligned_cols=104 Identities=20% Similarity=0.282 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHHH---hcC-c------hhHHHHHHHHHhhhhcccccHHHHHHHhhCCc---chHHHHHHHHHHhh
Q 018271 217 FIAITLATMSVGHIVVA---SGF-P------GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVG---HMGTIFNTIAIASP 283 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~---~~~-~------~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~---~~g~~~g~~~~~~~ 283 (358)
.+.++.++.+++++++. .+. . ..++++..+.++|.|+.=+...++..|.|+++ ++-+.+.+...+.+
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in 82 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGIN 82 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHh
Confidence 45667777777777632 222 2 35788888999999999999999999999876 46788889999999
Q ss_pred hHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHH
Q 018271 284 VGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 333 (358)
Q Consensus 284 ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~ 333 (358)
+|+. +++.+.+++.++.| |...|.+.++..+++.+..
T Consensus 83 ~G~~-~~~~~~~~i~~~~~------------~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 83 IGSL-FSPTLVPYIQQNYG------------WFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHH-HHHHCCCHHHHCS-------------HHHHHHHHHHHHHHHHHHH
T ss_pred hhhH-hhcccchhhccccc------------hhhhhhHHHHHHHHHHHHH
Confidence 9994 88889999998887 9999999998888887543
No 254
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.22 E-value=0.0031 Score=45.53 Aligned_cols=69 Identities=12% Similarity=0.047 Sum_probs=56.9
Q ss_pred hhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH
Q 018271 159 SGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA 233 (358)
Q Consensus 159 ~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~ 233 (358)
+-+.+...+|.+.++.++|.++++++.+...++..+|.+...++.++. .++..+..+.+...+..+.++
T Consensus 7 gRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~------~~~~~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 7 GRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS------RPRRLLRAGLLLTVLSTAAMA 75 (85)
T ss_pred HHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------cHHHHHHHHHHHHHHHHHHHH
Confidence 346678899999999999999999999999999999999999888875 455666667777766666665
No 255
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.21 E-value=0.0013 Score=66.04 Aligned_cols=169 Identities=15% Similarity=0.170 Sum_probs=118.0
Q ss_pred HHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhc-------
Q 018271 163 TVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASG------- 235 (358)
Q Consensus 163 ~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~------- 235 (358)
+.+.+.++=+.+++++++.+++.+.+-+++.+...+..+...|. .|..++.++.++++++.++.+.+
T Consensus 116 ~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~------HrPr~Ig~G~~~m~lgsll~alPHf~~~~y 189 (735)
T KOG3626|consen 116 FNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG------HRPRWIGIGLVLMGLGSLLFALPHFFSGPY 189 (735)
T ss_pred hhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc------CccceeeechhHHHHHHHHHhChHHhcCcc
Confidence 34455566667799999999999999999999999888887776 55566666666666666554211
Q ss_pred -------------C--------------------------------ch-hHHHHHHHHHhhhhcccccHHHHHHHhhCCc
Q 018271 236 -------------F--------------------------------PG-NLYVGSIIVGVCYGCQWSLMPTITYEIFGVG 269 (358)
Q Consensus 236 -------------~--------------------------------~~-~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~ 269 (358)
. ++ .+++.-++.|+|....+++..+|+=|...++
T Consensus 190 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~ 269 (735)
T KOG3626|consen 190 EYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKK 269 (735)
T ss_pred hhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccccccccc
Confidence 0 01 1334456788888888999999999999989
Q ss_pred chHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCC-CCCcc---cccc---chHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 270 HMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG-EGNSC---NGTH---CFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 270 ~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~-~~~~~---~g~~---~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
+-....|+......+|++ +|=+++++....+-.. .+..- ..++ +|...|++.+.+.++.++..+++-+
T Consensus 270 ~SplYlgi~~~~~~lGPa-iGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk 344 (735)
T KOG3626|consen 270 NSPLYLGILYSMAILGPA-IGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPK 344 (735)
T ss_pred CCcHHHHHHHHHHHhhhH-HHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 999999999998888984 7777777766655432 11111 1111 4667777888888888766555533
No 256
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.05 E-value=0.00094 Score=62.90 Aligned_cols=141 Identities=13% Similarity=0.021 Sum_probs=98.3
Q ss_pred HHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHH
Q 018271 148 LLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSV 227 (358)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~ 227 (358)
.+....+...+.+..-.+++++|+++.|.+....+.......+.+.+-+++.|..|||...|.. +||+.+........+
T Consensus 36 ~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~G-RRRPfI~~~s~~i~~ 114 (498)
T KOG0637|consen 36 SVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYG-RRRPFILAGSLLIAV 114 (498)
T ss_pred HHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccc-cccchHHHhhHHHHH
Confidence 3334444445555566778999999999998888888778888889999999999999876664 556666666666666
Q ss_pred HHHHHH-hc--------C--c--hhHHHHHH-----HHHhhhhcccccHHHHHHHhhCCcchHH-HHHHHHHHhhhHHHH
Q 018271 228 GHIVVA-SG--------F--P--GNLYVGSI-----IVGVCYGCQWSLMPTITYEIFGVGHMGT-IFNTIAIASPVGSYV 288 (358)
Q Consensus 228 ~~~l~~-~~--------~--~--~~l~~~~~-----l~g~~~g~~~~~~~~~~~e~f~~~~~g~-~~g~~~~~~~ig~~i 288 (358)
+++++. .. + . ....+..+ +.=++....+...-++..|+...+++-+ ++++.....++|+.
T Consensus 115 ~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnv- 193 (498)
T KOG0637|consen 115 SLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNV- 193 (498)
T ss_pred HHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcce-
Confidence 665543 11 1 1 11222233 3334555677788899999998877777 88888888888883
Q ss_pred Hh
Q 018271 289 CS 290 (358)
Q Consensus 289 ~g 290 (358)
+|
T Consensus 194 LG 195 (498)
T KOG0637|consen 194 LG 195 (498)
T ss_pred ee
Confidence 54
No 257
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.95 E-value=0.057 Score=51.99 Aligned_cols=101 Identities=12% Similarity=0.007 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHH--HHHHHHHHHHHHh----------cCchhHHHHHHHHH
Q 018271 181 INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT--LATMSVGHIVVAS----------GFPGNLYVGSIIVG 248 (358)
Q Consensus 181 a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~--~~~~~~~~~l~~~----------~~~~~l~~~~~l~g 248 (358)
.-..+.+++++..+||.+..+.. +.+++ .| ++.+.. =++....++++.. .+.+..++..+++|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~--~p~~~--~~-~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~g 383 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM--WPDED--SR-WLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFG 383 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE--eeCCC--cc-chHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHH
Confidence 34567889999999999765431 21111 22 222211 1222222233321 23344567788999
Q ss_pred hhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHH
Q 018271 249 VCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGS 286 (358)
Q Consensus 249 ~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~ 286 (358)
+..|-..+....+.++..++++|-.+-.+...+-.+|-
T Consensus 384 ltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl 421 (437)
T TIGR00939 384 FSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGL 421 (437)
T ss_pred HhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99998877888888888887777666666665555554
No 258
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.94 E-value=0.027 Score=55.98 Aligned_cols=162 Identities=19% Similarity=0.175 Sum_probs=116.3
Q ss_pred HhhhhhhhHHhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH
Q 018271 155 CGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA 233 (358)
Q Consensus 155 ~~~~~~~~~~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~ 233 (358)
+--.+.+++..++-.|+. +++.+...+...+..+.-......+++++++|.+- +|.+.+.++..+..++.+++.
T Consensus 48 ~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~-----gry~tI~~~s~i~~~G~~~lt 122 (571)
T KOG1237|consen 48 LERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFL-----GRYFTINIGSLISLLGLFGLT 122 (571)
T ss_pred HHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHH
Confidence 334455555555555554 66888788888888888888899999999999984 888888887777666654431
Q ss_pred ----hc-----------C------c-----hhHHHHHHHHHhhhhcccccHHHHHHHhhC---C-c--chHHHHHHHHHH
Q 018271 234 ----SG-----------F------P-----GNLYVGSIIVGVCYGCQWSLMPTITYEIFG---V-G--HMGTIFNTIAIA 281 (358)
Q Consensus 234 ----~~-----------~------~-----~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~---~-~--~~g~~~g~~~~~ 281 (358)
.. . + ..++...-+..+|.|+.-+...+.-+|.|+ + + .....+++....
T Consensus 123 ~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~ 202 (571)
T KOG1237|consen 123 LSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFS 202 (571)
T ss_pred HHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHH
Confidence 01 0 0 124445556667888888888889999998 2 2 234788888888
Q ss_pred hhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHH
Q 018271 282 SPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 334 (358)
Q Consensus 282 ~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~ 334 (358)
..+|.. ++..+.-++.+..+ |...|.+..++.+++.++.+
T Consensus 203 ~~~g~l-~a~t~~vyiq~~~~------------w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 203 QNGGAL-LAQTVLVYIQDNVG------------WKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred HHHHHH-HHHHHHHhhhhccc------------ceeeccHHHHHHHHHHHHHH
Confidence 898884 66666677766666 99999999888888776543
No 259
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.92 E-value=0.014 Score=54.69 Aligned_cols=167 Identities=13% Similarity=-0.017 Sum_probs=101.3
Q ss_pred HhcHHHHHHhc----CCCchh----hHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-h
Q 018271 164 VNNISQIGESL----GYPTSA----INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-S 234 (358)
Q Consensus 164 ~~~l~~~~~~~----G~s~~~----a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~ 234 (358)
.+.+|.|.++. |.+..+ .+...++..+...+-.|+.|.++|+.| .||+.+.+...+..+...++. .
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g-----~Rk~~~~~f~~i~i~~~~~L~~i 109 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPG-----PRKKFFGFFTAIGIISTFLLWFI 109 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCC-----CcchHHHHHHHHHHHHHHHHHHh
Confidence 34556555432 334332 344456777777888889999999997 445556666666666655555 3
Q ss_pred cC--chh-HHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCcc--
Q 018271 235 GF--PGN-LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSC-- 309 (358)
Q Consensus 235 ~~--~~~-l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~-- 309 (358)
++ ++. ..+..++...+..+......++.+++.++++.+...|+....+.+|+.+ +++.....-..+..+...-
T Consensus 110 ~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i--~li~~~~~~~~~~~~~~~~~l 187 (438)
T COG2270 110 PPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVI--LLIFVVLGFALGQQTGITIIL 187 (438)
T ss_pred CCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchH--HHHHHHHHHhcccccceeEEe
Confidence 32 333 3445566667777777788899999999988888887777777777753 4444322211111000000
Q ss_pred -----ccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018271 310 -----NGTHCFMLSFLIMASVAFVGCLVAFLLF 337 (358)
Q Consensus 310 -----~g~~~~~~~f~~~~~~~~~~~~~~~~~~ 337 (358)
-..+.-|.++.+.++-.++..+..+...
T Consensus 188 ~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v 220 (438)
T COG2270 188 LGLPPADGEDVRITGLLAALWWLLFALPMILNV 220 (438)
T ss_pred eccCccccccchhHHHHHHHHHHHHHhHHHhcc
Confidence 0222367788888877777776665543
No 260
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.92 E-value=0.034 Score=53.25 Aligned_cols=153 Identities=14% Similarity=0.027 Sum_probs=92.5
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
++.-++++.+..-+ +..+.+....++...+..|+...|++....+.+=++..+.+..|.++..++.+|+|-- .
T Consensus 252 w~~Y~~q~vflas~-alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlv------r 324 (432)
T PF06963_consen 252 WRTYFRQPVFLASF-ALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLV------R 324 (432)
T ss_pred HHHHHhCHHHHHHH-HHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch------h
Confidence 34445555554433 3333333345566677788888899999999999999999999999999999999632 2
Q ss_pred HHHHHHHHHHH----HHHHHH-hcCc-hhHHHHHHHHH-----hhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhH
Q 018271 217 FIAITLATMSV----GHIVVA-SGFP-GNLYVGSIIVG-----VCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVG 285 (358)
Q Consensus 217 ~~~~~~~~~~~----~~~l~~-~~~~-~~l~~~~~l~g-----~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig 285 (358)
.-..+...... +...+. ..++ ...-...++.| +|.-+.--....++.|..|+++||+..|.-+..+.+.
T Consensus 325 ~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf 404 (432)
T PF06963_consen 325 AGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLF 404 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHH
Confidence 22222222222 222222 2222 12222222223 2332333344567788899999999999998888877
Q ss_pred HHHHhHHHHHHHH
Q 018271 286 SYVCSVRIIGYIY 298 (358)
Q Consensus 286 ~~i~gp~i~g~l~ 298 (358)
.. + -.+.+.+.
T Consensus 405 ~l-l-~~~~~ii~ 415 (432)
T PF06963_consen 405 EL-L-SFVLTIIF 415 (432)
T ss_pred HH-H-HHHHHhcc
Confidence 74 3 34445444
No 261
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.53 E-value=0.028 Score=54.20 Aligned_cols=83 Identities=13% Similarity=0.232 Sum_probs=63.6
Q ss_pred HHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHH
Q 018271 245 IIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMAS 324 (358)
Q Consensus 245 ~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~ 324 (358)
+++|.+...+.....++.+|+.++.+.++..|++...+.++.. .||++...++...| +++.+.+..+
T Consensus 396 ~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~-~~~~~~t~~~~~~g------------~~~v~~~~~~ 462 (488)
T KOG2325|consen 396 VVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARV-VGPIFSTAIFTLSG------------PRPVWIILLC 462 (488)
T ss_pred heeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhh-hhHHHHhhhHHhcC------------ccHHHHHHHH
Confidence 3445555545556778889999999999999999999999994 89999999999888 8888877777
Q ss_pred HHHHHHHHHHHHHHHh
Q 018271 325 VAFVGCLVAFLLFIRT 340 (358)
Q Consensus 325 ~~~~~~~~~~~~~~~~ 340 (358)
..++......++.+|.
T Consensus 463 ~~l~~~~l~~~~~~r~ 478 (488)
T KOG2325|consen 463 LLLVVAALWIVFLKRL 478 (488)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 6666665554544443
No 262
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.47 E-value=0.68 Score=44.44 Aligned_cols=179 Identities=12% Similarity=0.059 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcC-CCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHH--HHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLG-YPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI--AIT 221 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G-~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~--~~~ 221 (358)
..|.++...++.....-.+.+..|.++.+.. -+..-.+.+-..-.+..++..+..|...||..|.+. -|.... -.+
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~-~~~~l~~Qn~s 81 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKV-IRTSLVVQNLS 81 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhh-HHHHHHHHHHH
Confidence 4567778888888888888888998888772 233334444445555666777777888899855443 111111 112
Q ss_pred HHHHHHHHHHHH-hcC-----chhHHH---HHHHHHhhhhcccccHHHH------HHHhh--CCcchHHHHHHHHHHhhh
Q 018271 222 LATMSVGHIVVA-SGF-----PGNLYV---GSIIVGVCYGCQWSLMPTI------TYEIF--GVGHMGTIFNTIAIASPV 284 (358)
Q Consensus 222 ~~~~~~~~~l~~-~~~-----~~~l~~---~~~l~g~~~g~~~~~~~~~------~~e~f--~~~~~g~~~g~~~~~~~i 284 (358)
..+.++.++.+. ... .+.... ...+.|.. .-..+....+ +.-+. .++.+....+.+--.--+
T Consensus 82 v~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i-~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 82 VAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI-ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH-HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHH
Confidence 222222222222 111 112111 11122111 1011111111 11222 223344445555444444
Q ss_pred HHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 285 GSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 285 g~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~~~ 338 (358)
.- +++|++.|.+.+..+ +.....+.++..+++..+=.++..
T Consensus 161 ck-llaPl~vG~l~t~~s------------~~~~~~~i~~~N~~S~~vEy~~l~ 201 (432)
T PF06963_consen 161 CK-LLAPLFVGLLMTFAS------------PVIAAIFIAGWNLASVFVEYFLLA 201 (432)
T ss_pred HH-HHHHHHHHHHhhccC------------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55 589999999998776 778888888888888766555443
No 263
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.43 E-value=0.059 Score=49.39 Aligned_cols=185 Identities=10% Similarity=0.119 Sum_probs=97.8
Q ss_pred HHHhhhchhH--HHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCch--hhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCC
Q 018271 137 ILQSVCTLNF--WLLFVAMLCGMGSGLATVNNISQIGESLGYPTS--AINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 212 (358)
Q Consensus 137 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~--~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~ 212 (358)
..+..++|.. |-+|.+ +...+++-..++...+-++..-.+. --|..=++..+.++++.+..|.+.-.+.|
T Consensus 227 l~~~y~np~ll~WSlWwA--l~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r---- 300 (433)
T KOG3810|consen 227 LQECYSNPRLLKWSLWWA--LASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNR---- 300 (433)
T ss_pred HHHHhcCchhhhhHHHHH--HhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccch----
Confidence 3445566654 444433 2333334444555445454421111 11233345566777888888888766632
Q ss_pred chHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhH
Q 018271 213 ERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 291 (358)
Q Consensus 213 gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp 291 (358)
.+..++.++.+..+...+++. ..+.+..++..+++...+....++....+++....+..|..+|+-....- ++-.
T Consensus 301 ~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl----~lQs 376 (433)
T KOG3810|consen 301 WGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVAL----ILQS 376 (433)
T ss_pred hhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHH----HHHH
Confidence 233455555555554555555 55667777888888877777777777777777777777777776543322 2222
Q ss_pred HHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 292 RIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 292 ~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
++.-...|..|-+=+ ....-.-|..=|.+.+++.+++..+
T Consensus 377 ilT~iVvd~~g~~L~-ir~Q~~~Y~~Yf~v~~~i~~~~~~~ 416 (433)
T KOG3810|consen 377 ILTLIVVDDRGLGLD-IRTQFVVYSSYFIVLGVIFLIGFGI 416 (433)
T ss_pred hheEEEEcccccCCC-cceeEEEEeehHHHHHHHHHHHHHH
Confidence 233333343321000 0000111444566777777776544
No 264
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.20 E-value=0.28 Score=46.47 Aligned_cols=156 Identities=10% Similarity=0.140 Sum_probs=93.5
Q ss_pred hcHHHHHH-h-cCCCchhhHHHH-HHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhH
Q 018271 165 NNISQIGE-S-LGYPTSAINSLV-SLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNL 240 (358)
Q Consensus 165 ~~l~~~~~-~-~G~s~~~a~~~~-~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l 240 (358)
.++..|+. . +|++..+...-+ -...=...+.-+....++|.. +-|+++++..+...+...++. ..+...+
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l------~Ykpviil~~~~~i~t~~lll~~~sv~~m 97 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL------RYKPVIILQALSYIITWLLLLFGTSVLAM 97 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh------hhhHHHHHHHHHHHHHHHHHHHHCcHHHH
Confidence 34444554 3 799887765432 223334555667788899999 555666666555455444443 5666667
Q ss_pred HHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHH
Q 018271 241 YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFL 320 (358)
Q Consensus 241 ~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~ 320 (358)
-+.-+..|++.+.- ...++++=...++++.-++.+....+.-+|.. ++.+ .|.+.-..+.. .|...++
T Consensus 98 q~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~-~s~~-lgQllvs~~~~---------sy~~L~~ 165 (412)
T PF01770_consen 98 QLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRF-ISSL-LGQLLVSFGGV---------SYFQLNY 165 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHhcCC---------CHHHHHH
Confidence 77777777776643 34455655556777777777777666655653 3433 34333322210 1888888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018271 321 IMASVAFVGCLVAFLLFI 338 (358)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~ 338 (358)
+..+...++.++++++..
T Consensus 166 isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 166 ISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 877777777766666543
No 265
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.13 E-value=0.77 Score=44.42 Aligned_cols=50 Identities=12% Similarity=0.131 Sum_probs=37.8
Q ss_pred hcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhcc
Q 018271 252 GCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 252 g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g 302 (358)
-..+....+.-+.+..|..-||.+.+.|+..++|+- .-..+.=++.|...
T Consensus 420 tvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt-WP~~~vL~lVD~fT 469 (544)
T PF13000_consen 420 TVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT-WPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC-chHHHHHHHhhhcc
Confidence 344555666777888899999999999999999994 65556666777653
No 266
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.55 E-value=1.1 Score=39.50 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=63.6
Q ss_pred ccHHHhhhchhHHHHHHHHHHhhhhhh-hHH-hcHHHHHHhcCC------Cch----hhHHHHHHHHHHHHHhhhHhHHH
Q 018271 135 MNILQSVCTLNFWLLFVAMLCGMGSGL-ATV-NNISQIGESLGY------PTS----AINSLVSLWSIWNFLGRFGGGYV 202 (358)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~l~~~~~~~G~------s~~----~a~~~~~~~~i~~~~g~~~~G~l 202 (358)
.+..+.+|++..|...+.+........ .+. .+...+....+. +.. .......++..+.++|.+..|..
T Consensus 85 ~s~~~~LK~K~tw~w~~~Yg~wLv~~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~~ig~~ 164 (267)
T PF07672_consen 85 PSYKSILKEKETWKWILIYGIWLVVVVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPFTIGLW 164 (267)
T ss_pred chHHHHHccchHHHHHHHHHHHheeEEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHHhhhceeeccc
Confidence 467888999999877666544322111 111 111112222111 111 12334445556666777777766
Q ss_pred HHHHhhhcCCchHHHHH----HHHHHHHHHHHHHH---hcC---chhHHHHHHHHHhhhhcccccHHHHHHHh--hCCcc
Q 018271 203 SDIVLHRMGWERPSFIA----ITLATMSVGHIVVA---SGF---PGNLYVGSIIVGVCYGCQWSLMPTITYEI--FGVGH 270 (358)
Q Consensus 203 sDr~~~k~~~gr~~~~~----~~~~~~~~~~~l~~---~~~---~~~l~~~~~l~g~~~g~~~~~~~~~~~e~--f~~~~ 270 (358)
+..-- .||+.+. .+.++..+..++.. ..+ ...+++..++.|++.-+.++..-..-.|. ..|+.
T Consensus 165 nkt~~-----kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEyK~~~pk~ 239 (267)
T PF07672_consen 165 NKTNY-----KRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEYKGYNPKK 239 (267)
T ss_pred hhhhh-----hhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhhcCCCcce
Confidence 53321 4444443 22233333332221 112 22355666677766655555433333332 23445
Q ss_pred hHHHHHHH
Q 018271 271 MGTIFNTI 278 (358)
Q Consensus 271 ~g~~~g~~ 278 (358)
.|.-+|+.
T Consensus 240 ig~~Fg~i 247 (267)
T PF07672_consen 240 IGIQFGLI 247 (267)
T ss_pred ehhHHHHH
Confidence 55555544
No 267
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.38 E-value=0.34 Score=45.84 Aligned_cols=130 Identities=14% Similarity=0.082 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHhhhhcccccHHHHH
Q 018271 184 LVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTIT 262 (358)
Q Consensus 184 ~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~ 262 (358)
+...-.+.+.+-.++..++.+|+.. ..| +.++..+.++++++.+ ..+.+.-+++.++.+++.|..-...-.+
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y----~~R--i~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l- 136 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPY----WIR--ILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL- 136 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccc----hHH--HHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-
Confidence 3334445667777788888888732 233 3334455666666655 3555555667777777776554444444
Q ss_pred HHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHHHHHH
Q 018271 263 YEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 336 (358)
Q Consensus 263 ~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~~~~~ 336 (358)
+..|++.. .+-...+.+.++ ++|+...-.+.+ .|- + .+.++.++..+.++-.+..+++
T Consensus 137 t~~y~~~~----l~~wssGTG~aG-l~Ga~~y~~lT~-~g~-------s---~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 137 THFYGKSS----LSAWSSGTGGAG-LVGALYYLGLTT-LGL-------S---PRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred HHhcCccc----cccccCCcChhh-HHHHHHHHHHHH-hCc-------C---HHHHHHHHHHHHHHHHHHHHHh
Confidence 44677532 333334444444 355544444444 321 0 5667776666554444333333
No 268
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.28 E-value=1.8 Score=41.82 Aligned_cols=142 Identities=12% Similarity=-0.015 Sum_probs=89.8
Q ss_pred hHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCch-HHHHHHHHHHHHHHHHHHH-h----------cCchhHHHHHHHHH
Q 018271 181 INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER-PSFIAITLATMSVGHIVVA-S----------GFPGNLYVGSIIVG 248 (358)
Q Consensus 181 a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr-~~~~~~~~~~~~~~~~l~~-~----------~~~~~l~~~~~l~g 248 (358)
..++=++..+.-++..++..++--+.++++...+ +.=..+++.++..+.+++. . .+.++++...++.+
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 3466677777777888888888888655532111 1123344444444444332 1 12355677788889
Q ss_pred hhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHH------HHhhccCCCCCccccccchHHHHHHH
Q 018271 249 VCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGY------IYDNVASGEGNSCNGTHCFMLSFLIM 322 (358)
Q Consensus 249 ~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~------l~~~~g~~~~~~~~g~~~~~~~f~~~ 322 (358)
++.-...++..+++..+-|+.-.+..++...+....|.. ++..+.+. .++... ....|+.+
T Consensus 406 ~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~-l~g~va~~~~~~~~~~~~~~------------~~~~F~~~ 472 (498)
T COG3104 406 FGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQT-LGGQVAGLTAVTDPAYTAFI------------EGRVFGTI 472 (498)
T ss_pred HHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-hhceecccccccchhhhhhh------------hhhhHHHH
Confidence 988888888889999999988888899988888777774 44444442 222222 56677777
Q ss_pred HHHHHHHHHHHHH
Q 018271 323 ASVAFVGCLVAFL 335 (358)
Q Consensus 323 ~~~~~~~~~~~~~ 335 (358)
+....+..+....
T Consensus 473 g~v~i~~~~~~~~ 485 (498)
T COG3104 473 GVVAIVIGILLLL 485 (498)
T ss_pred HHHHHHHHHHHHH
Confidence 7666655544433
No 269
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.07 E-value=0.021 Score=55.22 Aligned_cols=66 Identities=14% Similarity=0.181 Sum_probs=51.6
Q ss_pred hHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHH
Q 018271 162 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVV 232 (358)
Q Consensus 162 ~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~ 232 (358)
.+...++.|.+++|+++.+.+.++..--+..+++.|++|.++||+.+ +|+.++.+++....+.+++
T Consensus 29 ~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~-----~r~lllgsl~~~v~a~fll 94 (618)
T KOG3762|consen 29 SLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRK-----RRPLLLGSLLLSVTATFLL 94 (618)
T ss_pred ccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHh-----cCchhHHHHHHHHHHHHhe
Confidence 45567788999999999999999999999999999999999999953 3344555555555544443
No 270
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.77 E-value=0.5 Score=45.55 Aligned_cols=101 Identities=6% Similarity=-0.078 Sum_probs=82.6
Q ss_pred hhHHH-HHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccH
Q 018271 180 AINSL-VSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLM 258 (358)
Q Consensus 180 ~a~~~-~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~ 258 (358)
.++.. .++......+..++.+.+.|++ +.|+.++++........+.+...+...+++...+.|+|.+..|.-.
T Consensus 50 ~aGy~~~aiiY~~ftv~~l~~psiv~~i------~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~Gq 123 (461)
T KOG3098|consen 50 YAGYYGQAIIYAFFTVSCLFAPSIVNFL------GPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQ 123 (461)
T ss_pred CccHHHHHHHHHHHHHHHHhhHHHHHHh------hHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheeccc
Confidence 34554 6677777888899999999999 7788898888888877777776777788899999999999889999
Q ss_pred HHHHHHhhCCcchHHHHHHHHHHhhhHH
Q 018271 259 PTITYEIFGVGHMGTIFNTIAIASPVGS 286 (358)
Q Consensus 259 ~~~~~e~f~~~~~g~~~g~~~~~~~ig~ 286 (358)
..+.+|....+...+..++.-.....+.
T Consensus 124 G~ylt~~st~~tie~Nisi~Wai~~~~l 151 (461)
T KOG3098|consen 124 GGYLTSNSTRETIERNISIFWAIGQSSL 151 (461)
T ss_pred ceehhhcCChhhHHHHHHHHHHHHHHHH
Confidence 9999999998888888887755555555
No 271
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.17 E-value=0.014 Score=53.55 Aligned_cols=99 Identities=11% Similarity=0.065 Sum_probs=3.3
Q ss_pred HHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHH--HHHHHHHHHHH-----------hcCchhHHHHHHHHHh
Q 018271 183 SLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL--ATMSVGHIVVA-----------SGFPGNLYVGSIIVGV 249 (358)
Q Consensus 183 ~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~--~~~~~~~~l~~-----------~~~~~~l~~~~~l~g~ 249 (358)
..+.+++++..+||.+.++. ++..+ .++++..... ++....++++. .++.+..++..+++|+
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~--~~~~~---~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~ 260 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWP--RWPGP---SPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGF 260 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhccee--Eeccc---ccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHH
Confidence 34668999999999998875 33211 1223222211 11111111221 1233445667789999
Q ss_pred hhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHH
Q 018271 250 CYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGS 286 (358)
Q Consensus 250 ~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~ 286 (358)
..|-..++...+.++..+++.+-.+-.+....-.+|-
T Consensus 261 TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl 297 (309)
T PF01733_consen 261 TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGL 297 (309)
T ss_dssp ------HHHH---------------------------
T ss_pred ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 9988888888888888887776555555544444443
No 272
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.97 E-value=0.11 Score=46.09 Aligned_cols=96 Identities=17% Similarity=0.047 Sum_probs=57.9
Q ss_pred hcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhcCchhHHHHH
Q 018271 165 NNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGS 244 (358)
Q Consensus 165 ~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~ 244 (358)
.++-++.+.+|+...+.+.+.....-..++...+.|-++|+-|||+. .....+.+++.+ +.=..+++..+++++
T Consensus 58 PYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKra---cvtycitYiLsC---iTKhSpqYkVLmVGR 131 (454)
T KOG4332|consen 58 PYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA---CVTYCITYILSC---ITKHSPQYKVLMVGR 131 (454)
T ss_pred ceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccc---eeeehHHHHHHH---HhhcCCceEEEeehh
Confidence 34445566778888887776555444455555666889999976632 222333333322 211245667788999
Q ss_pred HHHHhhhhcccccHHH-HHHHhh
Q 018271 245 IIVGVCYGCQWSLMPT-ITYEIF 266 (358)
Q Consensus 245 ~l~g~~~g~~~~~~~~-~~~e~f 266 (358)
++-|+.....++..-+ ++.|.-
T Consensus 132 ~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 132 VLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhh
Confidence 9998888766655443 456654
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.83 E-value=5.2 Score=37.90 Aligned_cols=122 Identities=6% Similarity=-0.020 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhc-CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
.++..++........+..+++..+++.+++ +.+. +..+...+.+.+.+-.++.-.+--+...|. .++......+.
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~--~~~~~~~l~~~ 94 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRL--RTRVGYLLSLI 94 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 444444444444445567777888887776 4444 444555555555555555555555554431 22221211111
Q ss_pred -HHHHHHHHHHh--cC--c----hhHHHHHHHHHhhhhcccccHHHHHHHhhCCcch
Q 018271 224 -TMSVGHIVVAS--GF--P----GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHM 271 (358)
Q Consensus 224 -~~~~~~~l~~~--~~--~----~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~ 271 (358)
+..+..+.+.. .. . ....+...+.+++.+..++..+...++ +|++-.
T Consensus 95 ~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~yt 150 (406)
T KOG1479|consen 95 AILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYT 150 (406)
T ss_pred HHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHH
Confidence 11111111111 11 1 123345566777777777777777664 565543
No 274
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.11 E-value=1.5 Score=41.11 Aligned_cols=135 Identities=10% Similarity=0.078 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHH-----HHhhhcCCchHHHHH
Q 018271 145 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSD-----IVLHRMGWERPSFIA 219 (358)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsD-----r~~~k~~~gr~~~~~ 219 (358)
.+..+.+.+.+ .+.-++....+|.+++..|.|-++.+.+...+.=. --.++++.+.| |+||||. .++
T Consensus 32 ~illLl~LYll-QGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~Grrks-----Wvv 103 (510)
T KOG3574|consen 32 SILLLLFLYLL-QGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKS-----WVV 103 (510)
T ss_pred hHHHHHHHHHH-cCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccc-----eee
Confidence 44444444544 44446677799999998888866655443333222 23688899999 7765443 344
Q ss_pred HHHHHHHHHHHHHH-hcC---------chh--HHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHH
Q 018271 220 ITLATMSVGHIVVA-SGF---------PGN--LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSY 287 (358)
Q Consensus 220 ~~~~~~~~~~~l~~-~~~---------~~~--l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~ 287 (358)
-+..+....+.+++ ..+ +.. +....++.-|..+.--...-...-.+..+++.|-+......+..+|-+
T Consensus 104 p~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~Gyf 183 (510)
T KOG3574|consen 104 PCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYF 183 (510)
T ss_pred ehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHH
Confidence 44444444444443 111 111 111223333322222222233344455556666665555555555553
No 275
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=92.97 E-value=7.7 Score=36.01 Aligned_cols=117 Identities=18% Similarity=0.156 Sum_probs=65.9
Q ss_pred HHHHHHHHHhhhhhhhHHhcHHHHHHhc-CCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHh-hhcCCchHHHH-HHHHH
Q 018271 147 WLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVL-HRMGWERPSFI-AITLA 223 (358)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~-~k~~~gr~~~~-~~~~~ 223 (358)
|++.++.+++..++..+...+.++...+ |-+..+.+++++.+.....+|+.+.-++.|--- .|.. .--.++ +++-+
T Consensus 10 alL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv-~vElllgligg~ 88 (508)
T COG4262 10 ALLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFV-DVELLLGLIGGV 88 (508)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHH-HHHHHHHHhccc
Confidence 4455555555556666677777777765 666677788888888888888887777665421 0000 111111 11111
Q ss_pred HHHHHHHHHHh---cCchhHHHHHHHHHhhhhcccccHHHHHHH
Q 018271 224 TMSVGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYE 264 (358)
Q Consensus 224 ~~~~~~~l~~~---~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e 264 (358)
-..+..+.++. .+.+.++....++|.-.|.-.++.+.+...
T Consensus 89 Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 89 SAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 11112223332 233456777788888888777776666554
No 276
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.06 E-value=13 Score=36.46 Aligned_cols=42 Identities=17% Similarity=0.243 Sum_probs=34.4
Q ss_pred cHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHh
Q 018271 257 LMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 299 (358)
Q Consensus 257 ~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~ 299 (358)
+.+.++.|.+..++-.+.+++.++++++|.. +++.+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli-~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLI-FSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4678889999999999999999999999984 66666666555
No 277
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.61 E-value=3.9 Score=38.73 Aligned_cols=109 Identities=13% Similarity=0.087 Sum_probs=61.9
Q ss_pred HhcHHHHHHhc---CC-CchhhHHHHHH-HHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHH-HH----
Q 018271 164 VNNISQIGESL---GY-PTSAINSLVSL-WSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIV-VA---- 233 (358)
Q Consensus 164 ~~~l~~~~~~~---G~-s~~~a~~~~~~-~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l-~~---- 233 (358)
.+..|-+..+. +. +.--.-....+ +++...+|++...+.-+.= +|...+....=+..+.++. +-
T Consensus 263 LsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~------~r~l~i~v~lR~lfiPlF~~cn~~~~ 336 (406)
T KOG1479|consen 263 LSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD------PRKLTIPVLLRLLFIPLFLLCNYPPL 336 (406)
T ss_pred eEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC------CceehHHHHHHHHHHHHHHHhccCCC
Confidence 34556555432 22 22333444555 8899999988877775542 2333333322222222222 11
Q ss_pred ---hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHH
Q 018271 234 ---SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI 278 (358)
Q Consensus 234 ---~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~ 278 (358)
..+.+.+++...++|+..|=..++...+.++..+++.+-.+-.+.
T Consensus 337 ~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m 384 (406)
T KOG1479|consen 337 PVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLM 384 (406)
T ss_pred CceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHH
Confidence 244566778888999999877777778888887766543333333
No 278
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=87.60 E-value=29 Score=33.80 Aligned_cols=42 Identities=10% Similarity=0.179 Sum_probs=32.2
Q ss_pred cHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHh
Q 018271 257 LMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 299 (358)
Q Consensus 257 ~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~ 299 (358)
+.+..+.|++..++-.+-+++.+++.+++.. ++..+.+++..
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~ll-lsg~~~~~~~k 209 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLL-LSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHH-HHHHHHHHHhh
Confidence 4567778888888889999999999999885 55555555544
No 279
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=85.31 E-value=5.2 Score=37.65 Aligned_cols=165 Identities=10% Similarity=-0.053 Sum_probs=83.1
Q ss_pred HHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 137 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
.+++++-+....+...-...=.++.+-....+.-+.|.|++..+.++......-.++++....|..+.....-...-|..
T Consensus 258 l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~ 337 (510)
T KOG3574|consen 258 LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAV 337 (510)
T ss_pred HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhh
Confidence 44455544443333333333334444455556667788999888776654444444444444444332100000001111
Q ss_pred HHHHHHHHHHHHHHHHH--hcC-----chhH-HHHH---HHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhH
Q 018271 217 FIAITLATMSVGHIVVA--SGF-----PGNL-YVGS---IIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVG 285 (358)
Q Consensus 217 ~~~~~~~~~~~~~~l~~--~~~-----~~~l-~~~~---~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig 285 (358)
.+-+........++... ... +... ++.+ .+.+...-..+...++..+.+.++..-||.+.+.|+..++|
T Consensus 338 ~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLG 417 (510)
T KOG3574|consen 338 PYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLG 417 (510)
T ss_pred hHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhc
Confidence 11111111111111111 111 1111 1111 23333333344455677788889999999999999999999
Q ss_pred HHHHhHHHHHHHHhhcc
Q 018271 286 SYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 286 ~~i~gp~i~g~l~~~~g 302 (358)
+- .-..+.+++.|...
T Consensus 418 g~-wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 418 GN-WPGTVALWLADGLT 433 (510)
T ss_pred CC-cHHHHHHHhcccCc
Confidence 85 66678888888765
No 280
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=80.73 E-value=12 Score=37.01 Aligned_cols=70 Identities=21% Similarity=0.249 Sum_probs=34.4
Q ss_pred HHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCC-CchhhHHHHHHHHHHHHHhhhHhHHHHHHHhh
Q 018271 138 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGY-PTSAINSLVSLWSIWNFLGRFGGGYVSDIVLH 208 (358)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~-s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~ 208 (358)
.+++|.|+- ...++.+++.+...........+....|+ ++..-+.+.+...+..+++.+++|+.+-|.-+
T Consensus 252 gDVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk 322 (521)
T PF02990_consen 252 GDVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYK 322 (521)
T ss_pred HHHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 456666652 34444455555444444444444444443 33333445545455555555666666665543
No 281
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=75.51 E-value=32 Score=25.90 Aligned_cols=27 Identities=19% Similarity=0.266 Sum_probs=20.4
Q ss_pred hhHHHHHHHHHHHHHhhhHhHHHHHHH
Q 018271 180 AINSLVSLWSIWNFLGRFGGGYVSDIV 206 (358)
Q Consensus 180 ~a~~~~~~~~i~~~~g~~~~G~lsDr~ 206 (358)
..+.......++..++..+.+++.|..
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~ 114 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFL 114 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhccc
Confidence 345556677788888888888888876
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=74.16 E-value=87 Score=30.25 Aligned_cols=28 Identities=7% Similarity=0.043 Sum_probs=18.8
Q ss_pred HHHHHHHHhhhhcccccHHHHHHHhhCCc
Q 018271 241 YVGSIIVGVCYGCQWSLMPTITYEIFGVG 269 (358)
Q Consensus 241 ~~~~~l~g~~~g~~~~~~~~~~~e~f~~~ 269 (358)
++..++.|++.+..++...++.+ .||++
T Consensus 110 ~~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 110 MASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 34556677777777777777766 57754
No 283
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=74.09 E-value=16 Score=33.70 Aligned_cols=109 Identities=12% Similarity=0.066 Sum_probs=55.4
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 223 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~ 223 (358)
+..|.+...+++....+.+..+.....-.++|.. ..+. ..+.-+...++.+.+..++ |-|+.+.++..
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~vn~~lg~~--sl~~----~y~~l~~s~m~~~~~Ir~~------g~K~tm~lav~ 96 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTSVNYDLGTV--SLGA----LYLSLIDSSMFMPLLIRFL------GTKWTMVLAVF 96 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccc--hhhh----hhHHHHHHHHHHHHHHHHH------hhHHHHHHHHH
Confidence 4556666555555555444433332222233322 1111 1122233344444666777 66677665544
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHhhhhcccccHHHHHHH
Q 018271 224 TMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYE 264 (358)
Q Consensus 224 ~~~~~~~l~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e 264 (358)
........-..+.+..++-.....|++.+..|+..-+++++
T Consensus 97 ~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~ 137 (390)
T KOG3097|consen 97 PYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTP 137 (390)
T ss_pred HHHHHHHhhcchhHHhhccHHHhhccccccccccCcceecH
Confidence 44332221112334556677888999998888776666543
No 284
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=71.97 E-value=7.4 Score=31.43 Aligned_cols=33 Identities=9% Similarity=0.047 Sum_probs=26.1
Q ss_pred ccccHHHHHHHhhCCcchHHHHHHHHHHhhhHH
Q 018271 254 QWSLMPTITYEIFGVGHMGTIFNTIAIASPVGS 286 (358)
Q Consensus 254 ~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~ 286 (358)
..++.|.+++--+.++.-|+..|+-.+-.+++-
T Consensus 111 llGisYGilSaSWD~~r~GSllG~~e~~~N~~r 143 (153)
T PF11947_consen 111 LLGISYGILSASWDPEREGSLLGWEEFKRNWGR 143 (153)
T ss_pred HHhhhhhhcccccCCCCCCCcccHHHHHHhHHH
Confidence 445678888888888888999999877776665
No 285
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=71.88 E-value=1e+02 Score=30.11 Aligned_cols=146 Identities=10% Similarity=0.048 Sum_probs=82.2
Q ss_pred HHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhc-----CCchH-----HHHHHHHHHHHHHHHHHHh----
Q 018271 169 QIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRM-----GWERP-----SFIAITLATMSVGHIVVAS---- 234 (358)
Q Consensus 169 ~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~-----~~gr~-----~~~~~~~~~~~~~~~l~~~---- 234 (358)
.++.|. .+..|+.-+..++++++-+|.+++|.+...+.+.+ ..+.. .++.+..+...+.+.+...
T Consensus 152 ~fandi-~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~ 230 (472)
T TIGR00769 152 GFANQI-TTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRN 230 (472)
T ss_pred HHHHhc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444443 56678888888888888888888887776654210 00111 1222222222222211100
Q ss_pred -------------------------------cCchh--HHHHHHHHHhhhhcccccHHHHHHHhhCC-cchHHHHHHHHH
Q 018271 235 -------------------------------GFPGN--LYVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFNTIAI 280 (358)
Q Consensus 235 -------------------------------~~~~~--l~~~~~l~g~~~g~~~~~~~~~~~e~f~~-~~~g~~~g~~~~ 280 (358)
.++.. +.+..++.++.........-..+.+.+|. +.|+..+|-...
T Consensus 231 ~~~~~~~~~~~~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~ 310 (472)
T TIGR00769 231 VLTDPRSYNPALKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFST 310 (472)
T ss_pred ccCCccccchhhccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 00111 11222334444444444444667888875 468888888877
Q ss_pred HhhhHHHHHhHHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHH
Q 018271 281 ASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFV 328 (358)
Q Consensus 281 ~~~ig~~i~gp~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~ 328 (358)
..++.++ +..++.+.+.++.| |..+..+...+.++
T Consensus 311 ~~gi~tl-~~~l~~~~l~~~~G------------w~~~a~i~Pii~li 345 (472)
T TIGR00769 311 WTGVVSV-TMMLLSGNVIRKYG------------WLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHH-HHHHHHHHHHHHhh------------HHHHHHHHHHHHHH
Confidence 7777774 44556689999988 88777766665555
No 286
>PRK10263 DNA translocase FtsK; Provisional
Probab=69.05 E-value=1.1e+02 Score=33.84 Aligned_cols=20 Identities=10% Similarity=0.067 Sum_probs=10.9
Q ss_pred HHHHHHHHhhhHhHHHHHHH
Q 018271 187 LWSIWNFLGRFGGGYVSDIV 206 (358)
Q Consensus 187 ~~~i~~~~g~~~~G~lsDr~ 206 (358)
+-+.++.+|..+...+..-+
T Consensus 60 V~Nl~GiVGA~LAD~L~~LF 79 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIF 79 (1355)
T ss_pred cccccchHHHHHHHHHHHHH
Confidence 44555566665555555544
No 287
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.34 E-value=15 Score=27.62 Aligned_cols=32 Identities=16% Similarity=0.103 Sum_probs=20.7
Q ss_pred chHHHHHHHHHHhhhHHHHHhHHHHHHHHhhcc
Q 018271 270 HMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 302 (358)
Q Consensus 270 ~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g 302 (358)
.++.+.++-...--+++.++ ....||+.|++-
T Consensus 39 ~k~~~~a~klssefIsGilV-Ga~iG~llD~~a 70 (116)
T COG5336 39 IKGYAQAFKLSSEFISGILV-GAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 45555555555556666444 467899999874
No 288
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=65.82 E-value=31 Score=33.77 Aligned_cols=83 Identities=14% Similarity=-0.052 Sum_probs=44.2
Q ss_pred HHHHHHHHhhhhhhhHH-hcHHHHHHh--cCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHH
Q 018271 148 LLFVAMLCGMGSGLATV-NNISQIGES--LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 224 (358)
Q Consensus 148 ~~~~~~~~~~~~~~~~~-~~l~~~~~~--~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~ 224 (358)
++.+.+++.... .++. ..+|.++++ .+.|=++.+.+... +-.. --.++++.+.|-+-.|+.-+||..++-...+
T Consensus 4 lL~~LY~lQGiP-~GL~~gsiPflL~~~~~~~sy~q~~~fSla-~~Pf-SlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l 80 (544)
T PF13000_consen 4 LLVLLYFLQGIP-LGLAFGSIPFLLQSMAKKVSYSQQAIFSLA-SYPF-SLKLLWAPIVDSVYSKRIGRRKSWIIPIQYL 80 (544)
T ss_pred HHHHHHHHcCcc-cccccccchhhhccccCCCChhHheeeeee-echh-HHHHhhhhhhhhhcccccCCcchhhhHHHHH
Confidence 344455554433 3443 588999998 67665554433211 1111 1267788888865444431344455556666
Q ss_pred HHHHHHHHH
Q 018271 225 MSVGHIVVA 233 (358)
Q Consensus 225 ~~~~~~l~~ 233 (358)
.++.++.++
T Consensus 81 ~g~~m~~l~ 89 (544)
T PF13000_consen 81 SGILMLYLS 89 (544)
T ss_pred HHHHHHHHH
Confidence 666555544
No 289
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=63.65 E-value=51 Score=29.75 Aligned_cols=134 Identities=13% Similarity=0.106 Sum_probs=73.1
Q ss_pred hhhchhHHHHHHHHHHhhhhhhhH-HhcHHHHHH-hcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 140 SVCTLNFWLLFVAMLCGMGSGLAT-VNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~-~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
+..+.+..++.....+.-+..|.+ ..|.|.+-- +.+.+ -+.+++.+.+.+.+|+-+..++..|-.. .-...
T Consensus 244 iaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iP---hGfiFatFMlASmLGSSla~Rl~s~s~~----~ve~y 316 (454)
T KOG4332|consen 244 IASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLLSRSSP----KVESY 316 (454)
T ss_pred HhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCC---chhHHHHHHHHHHHhhHHHHHHHhcCCc----ccchH
Confidence 334555554444443333333333 336665432 22333 3566777777777777766555554321 12223
Q ss_pred HHHHHHHHHHHHHHHH---hcC-----chhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHH
Q 018271 218 IAITLATMSVGHIVVA---SGF-----PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAI 280 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~~---~~~-----~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~ 280 (358)
+.+.+.+.++.+.+.. ..+ +..-.+..+++-.+.|..|+...-+=+++.|.+.|++.+++.-+
T Consensus 317 mqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRv 387 (454)
T KOG4332|consen 317 MQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRV 387 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheec
Confidence 3333333333333321 111 12234555666677888888888888888899999999988744
No 290
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=63.59 E-value=1.5e+02 Score=29.00 Aligned_cols=28 Identities=11% Similarity=0.138 Sum_probs=21.3
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 018271 11 SADDKKHLNAFSAVALTIAAYLMIIIIL 38 (358)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (358)
+.++.++|+.++.+.-.+..++-+..+.
T Consensus 178 t~~eakRFy~lf~l~~ni~lllsg~~~~ 205 (509)
T COG3202 178 TIEEAKRFYPLFGLGANISLLLSGEVTS 205 (509)
T ss_pred hHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999998877777777666544
No 291
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=63.30 E-value=23 Score=34.17 Aligned_cols=64 Identities=13% Similarity=-0.127 Sum_probs=37.3
Q ss_pred hhHHHHHHHHHHhhhhhhhHHhcHHHHH-Hh-c-CCC---------------chhhHHHHHHHHHHHHHhhhHhHHHHHH
Q 018271 144 LNFWLLFVAMLCGMGSGLATVNNISQIG-ES-L-GYP---------------TSAINSLVSLWSIWNFLGRFGGGYVSDI 205 (358)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~-G~s---------------~~~a~~~~~~~~i~~~~g~~~~G~lsDr 205 (358)
+..|.+.+...+.+.+.+.+.-+-..++ ++ + |-+ .....+-+.+.++...+-+...-++.||
T Consensus 279 r~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~ 358 (498)
T KOG0637|consen 279 RPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRK 358 (498)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5667777777666655554433333222 11 1 211 1122455677777778888888889999
Q ss_pred Hh
Q 018271 206 VL 207 (358)
Q Consensus 206 ~~ 207 (358)
+|
T Consensus 359 ~g 360 (498)
T KOG0637|consen 359 FG 360 (498)
T ss_pred cC
Confidence 87
No 292
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.96 E-value=28 Score=26.22 Aligned_cols=18 Identities=28% Similarity=0.252 Sum_probs=12.3
Q ss_pred HHHHHhhhHhHHHHHHHh
Q 018271 190 IWNFLGRFGGGYVSDIVL 207 (358)
Q Consensus 190 i~~~~g~~~~G~lsDr~~ 207 (358)
+++++-....||+.|||.
T Consensus 53 IsGilVGa~iG~llD~~a 70 (116)
T COG5336 53 ISGILVGAGIGWLLDKFA 70 (116)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 444444555699999985
No 293
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=60.58 E-value=1.4e+02 Score=27.60 Aligned_cols=53 Identities=8% Similarity=0.012 Sum_probs=37.8
Q ss_pred cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHH
Q 018271 235 GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSY 287 (358)
Q Consensus 235 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~ 287 (358)
++.+...+..+.-|+-.|+.+....--+.+-.++++|=-+++.+..+..+|-.
T Consensus 340 psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~ 392 (409)
T KOG3880|consen 340 PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIF 392 (409)
T ss_pred cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHH
Confidence 44455555666678777777766666666667778899999988888877764
No 294
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=59.60 E-value=1.6e+02 Score=27.99 Aligned_cols=64 Identities=11% Similarity=-0.153 Sum_probs=33.2
Q ss_pred HHHHHHHHhhhhhhhHHhcHHHHHHhcC-CCchhhHHHHHHHHHHHHHhhhHhHHHHHHHhhhcC
Q 018271 148 LLFVAMLCGMGSGLATVNNISQIGESLG-YPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 211 (358)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~l~~~~~~~G-~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k~~ 211 (358)
.+..++++.....-++.+....++..+| -|....+..-.+-+....+..++.|.-.|+..|+|.
T Consensus 31 ~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kv 95 (503)
T KOG2601|consen 31 FLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKV 95 (503)
T ss_pred hhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHH
Confidence 3555666555555556666666666663 232222222223333334444445666688876664
No 295
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=57.00 E-value=79 Score=25.60 Aligned_cols=31 Identities=23% Similarity=-0.156 Sum_probs=22.7
Q ss_pred hhhHHHHHHHHHHHHHhhhHhHHHHHHHhhh
Q 018271 179 SAINSLVSLWSIWNFLGRFGGGYVSDIVLHR 209 (358)
Q Consensus 179 ~~a~~~~~~~~i~~~~g~~~~G~lsDr~~~k 209 (358)
..+.+++++..++..+..+-.|.||-.|...
T Consensus 96 ~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred chHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 4455667777777777788889999888543
No 296
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=56.55 E-value=2.1e+02 Score=28.21 Aligned_cols=72 Identities=7% Similarity=-0.168 Sum_probs=34.3
Q ss_pred ccHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhh----HHHHHHHHHHHHHhhhHhHHHHHHH
Q 018271 135 MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAI----NSLVSLWSIWNFLGRFGGGYVSDIV 206 (358)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a----~~~~~~~~i~~~~g~~~~G~lsDr~ 206 (358)
.+.+.+++++-...+.+...+.......+....-..+++.--++.+. +.+.+..++...+-.++++.+..|+
T Consensus 271 es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~ 346 (491)
T PF03219_consen 271 ESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF 346 (491)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35666777777766655554444333333322223333332222222 2333444444455556666666665
No 297
>COG2056 Predicted permease [General function prediction only]
Probab=55.26 E-value=1.8e+02 Score=27.22 Aligned_cols=31 Identities=26% Similarity=0.287 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 018271 315 FMLSFLIMASVAFVGCLVAFLLFIRTRRFYK 345 (358)
Q Consensus 315 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (358)
...+.++.+..++++.++..+...|+.|.|+
T Consensus 190 V~~am~ip~lgMi~GLl~ai~~~YrKpReY~ 220 (444)
T COG2056 190 VPKAMWIPGLGMIVGLLLAIFVSYRKPREYQ 220 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 5567778888888888877776444444443
No 298
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=52.84 E-value=1.7e+02 Score=30.29 Aligned_cols=48 Identities=17% Similarity=0.121 Sum_probs=24.2
Q ss_pred HHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH--hcCchhHHHHHHHHHhhh
Q 018271 202 VSDIVLHRMGWERPSFIAITLATMSVGHIVVA--SGFPGNLYVGSIIVGVCY 251 (358)
Q Consensus 202 lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~g~~~ 251 (358)
++|.=++.+ +|..-+.++.++++++.+... .+.++.+....++.+|+.
T Consensus 46 l~D~~~~~~--~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 46 LDDLDDRLT--GRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGF 95 (701)
T ss_pred cCCCCccHH--HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 555533222 555555666666655555433 344555555555555443
No 299
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=51.76 E-value=1.3e+02 Score=29.79 Aligned_cols=30 Identities=27% Similarity=0.310 Sum_probs=16.5
Q ss_pred CchhhHHHHHHHHHHHHHhhhHhHHHHHHH
Q 018271 177 PTSAINSLVSLWSIWNFLGRFGGGYVSDIV 206 (358)
Q Consensus 177 s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~ 206 (358)
+++.=|.+++...+..+++.+++|+.+-|.
T Consensus 357 SPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 357 SPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 444444455555555555666666666664
No 300
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=50.07 E-value=1.6e+02 Score=24.96 Aligned_cols=17 Identities=29% Similarity=0.350 Sum_probs=9.6
Q ss_pred HHHHHHHHhhhHhHHHH
Q 018271 187 LWSIWNFLGRFGGGYVS 203 (358)
Q Consensus 187 ~~~i~~~~g~~~~G~ls 203 (358)
..-++-++|..+.+.+.
T Consensus 54 ~~i~~F~~G~~~~~~i~ 70 (209)
T PF06912_consen 54 LAILSFILGAFLAGLIV 70 (209)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344556667766663
No 301
>PF12832 MFS_1_like: MFS_1 like family
Probab=48.02 E-value=94 Score=21.73 Aligned_cols=31 Identities=10% Similarity=0.239 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhhhHHHHHhHHHHHHHHhhccC
Q 018271 272 GTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 303 (358)
Q Consensus 272 g~~~g~~~~~~~ig~~i~gp~i~g~l~~~~g~ 303 (358)
..-.|+......+-. +++|++.|.+.|+.+.
T Consensus 34 ~~~iGil~~i~~~~~-~~~~pl~g~laDk~~~ 64 (77)
T PF12832_consen 34 PSQIGILSAIRPLIR-FLAPPLWGFLADKFGK 64 (77)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCc
Confidence 455566666666666 4688899999999985
No 302
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=47.81 E-value=2.4e+02 Score=26.40 Aligned_cols=90 Identities=16% Similarity=0.237 Sum_probs=46.2
Q ss_pred chhHHHHHHHHHHhhhhhh----hHHhcHHHHHHhcCCCchhhHHHHHHHH-HHHHHhhhHhHHHHHHHhhhcCCchHHH
Q 018271 143 TLNFWLLFVAMLCGMGSGL----ATVNNISQIGESLGYPTSAINSLVSLWS-IWNFLGRFGGGYVSDIVLHRMGWERPSF 217 (358)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~G~s~~~a~~~~~~~~-i~~~~g~~~~G~lsDr~~~k~~~gr~~~ 217 (358)
.+.++.++++.++...+.. .+..|+-.=..+.|++....+-.+.... +.+.+-.+..|.+++-.-+....++...
T Consensus 118 ~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaP 197 (354)
T PF05631_consen 118 SSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAP 197 (354)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcch
Confidence 4667777777766654443 3444554434456888765555544444 4444445555555544322222244444
Q ss_pred HHHHHHHHHHHHHHH
Q 018271 218 IAITLATMSVGHIVV 232 (358)
Q Consensus 218 ~~~~~~~~~~~~~l~ 232 (358)
...+..+.+++.++.
T Consensus 198 F~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 198 FDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444544444444433
No 303
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=47.52 E-value=2.6e+02 Score=28.95 Aligned_cols=50 Identities=20% Similarity=0.186 Sum_probs=24.5
Q ss_pred HHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHH--hcCchhHHHHHHHHHhhh
Q 018271 200 GYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA--SGFPGNLYVGSIIVGVCY 251 (358)
Q Consensus 200 G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~g~~~ 251 (358)
+-++|.=++.+ +|..-+.++.++++++.+... .+.++.+....++.+|+.
T Consensus 44 ~al~D~d~~~~--~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 44 AALVDLDDRLT--GRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred hccCCCCCcHH--HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 33556433222 454545555555555544433 455555555555554443
No 304
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=45.90 E-value=2.6e+02 Score=26.16 Aligned_cols=21 Identities=14% Similarity=0.335 Sum_probs=12.4
Q ss_pred HHHhhhchhHHHHHHHHHHhh
Q 018271 137 ILQSVCTLNFWLLFVAMLCGM 157 (358)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~ 157 (358)
.++.+++|.++...++..+..
T Consensus 238 ~~~~~~nP~~~a~~lgli~~~ 258 (385)
T PF03547_consen 238 ILKLFKNPPLIAIILGLIIGL 258 (385)
T ss_pred HHHHHhCcHHHHHHHHHHHHH
Confidence 345566777776665555443
No 305
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=44.31 E-value=31 Score=29.93 Aligned_cols=89 Identities=13% Similarity=-0.055 Sum_probs=47.3
Q ss_pred hHhHHHHHHHhhhcCCchH--HHHHHHHHHHHHHHHHHH----hcCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcc
Q 018271 197 FGGGYVSDIVLHRMGWERP--SFIAITLATMSVGHIVVA----SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGH 270 (358)
Q Consensus 197 ~~~G~lsDr~~~k~~~gr~--~~~~~~~~~~~~~~~l~~----~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~ 270 (358)
+=.+.++||+|-.-.=+|- ..++++.++..+.+-+++ ..+...-.....-.|.|.+...+....-..+.+| +.
T Consensus 125 p~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~P-~~ 203 (241)
T PF11299_consen 125 PNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAYP-EM 203 (241)
T ss_pred cceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHCc-ch
Confidence 3446677888765432222 223333333333332222 1222233455566788888777777777788886 55
Q ss_pred hHHHHHHHHHHhhhHH
Q 018271 271 MGTIFNTIAIASPVGS 286 (358)
Q Consensus 271 ~g~~~g~~~~~~~ig~ 286 (358)
..+..++....+-+.+
T Consensus 204 a~~i~A~AaaSNllt~ 219 (241)
T PF11299_consen 204 ADQILAFAAASNLLTS 219 (241)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555555555444444
No 306
>PTZ00370 STEVOR; Provisional
Probab=43.46 E-value=69 Score=28.76 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 018271 315 FMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQV 347 (358)
Q Consensus 315 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (358)
|..+-+++.++.++..++..|+++|.++.++..
T Consensus 257 ygiaalvllil~vvliilYiwlyrrRK~swkhe 289 (296)
T PTZ00370 257 YGIAALVLLILAVVLIILYIWLYRRRKNSWKHE 289 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 666666666666776767777777666655443
No 307
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=40.87 E-value=2.7e+02 Score=24.97 Aligned_cols=15 Identities=13% Similarity=0.148 Sum_probs=6.4
Q ss_pred cCchhHHHHHHHHHh
Q 018271 235 GFPGNLYVGSIIVGV 249 (358)
Q Consensus 235 ~~~~~l~~~~~l~g~ 249 (358)
+.++.+.+..++.+|
T Consensus 21 ~~~~l~~~~~~~~~F 35 (284)
T PF12805_consen 21 PYPWLLILVLALLTF 35 (284)
T ss_pred hccHHHHHHHHHHHH
Confidence 334444444444443
No 308
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=37.17 E-value=1.3e+02 Score=21.16 Aligned_cols=28 Identities=32% Similarity=0.527 Sum_probs=19.0
Q ss_pred HHHHHHHHhhccCCCCCccccccchHHHHHHHHHHHHHHHHH
Q 018271 291 VRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 332 (358)
Q Consensus 291 p~i~g~l~~~~g~~~~~~~~g~~~~~~~f~~~~~~~~~~~~~ 332 (358)
.++.|++.+. ++.++++.++..++++++
T Consensus 24 sfi~Gy~~q~--------------~~~~~~~~~~g~~~~~lv 51 (76)
T PF06645_consen 24 SFIVGYITQS--------------FSYTFYIYGAGVVLTLLV 51 (76)
T ss_pred HHHHHHHHHH--------------HHHHHHHHHHHHHHHHhh
Confidence 4678888875 667777766665555543
No 309
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=36.32 E-value=37 Score=28.95 Aligned_cols=15 Identities=7% Similarity=0.140 Sum_probs=7.7
Q ss_pred HHhhhHhHHHHHHHh
Q 018271 193 FLGRFGGGYVSDIVL 207 (358)
Q Consensus 193 ~~g~~~~G~lsDr~~ 207 (358)
+++.++..++.+.+.
T Consensus 121 i~~G~~~~~~~~~i~ 135 (206)
T PF06570_consen 121 IVGGLVFYFIFKYIY 135 (206)
T ss_pred HHHHHHHHHHHHHHh
Confidence 444455555555544
No 310
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=33.58 E-value=1.5e+02 Score=20.55 Aligned_cols=24 Identities=13% Similarity=0.288 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 018271 316 MLSFLIMASVAFVGCLVAFLLFIR 339 (358)
Q Consensus 316 ~~~f~~~~~~~~~~~~~~~~~~~~ 339 (358)
...++++.-+.++++++++-+...
T Consensus 24 ~~vll~LtPlfiisa~lSwkLaK~ 47 (74)
T PF15086_consen 24 TTVLLILTPLFIISAVLSWKLAKA 47 (74)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHH
Confidence 445566677777888787776544
No 311
>COG3619 Predicted membrane protein [Function unknown]
Probab=33.51 E-value=3.2e+02 Score=23.75 Aligned_cols=41 Identities=22% Similarity=0.184 Sum_probs=19.4
Q ss_pred cHHHHHHhcCCCchhhHHHHHHHHHHHHHhhhHhHHHHHHH
Q 018271 166 NISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIV 206 (358)
Q Consensus 166 ~l~~~~~~~G~s~~~a~~~~~~~~i~~~~g~~~~G~lsDr~ 206 (358)
|+.....++.-+...-.....+..+.-++|......+..|.
T Consensus 42 N~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~ 82 (226)
T COG3619 42 NLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRA 82 (226)
T ss_pred cHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444444422233333444555555666655555454443
No 312
>COG0385 Predicted Na+-dependent transporter [General function prediction only]
Probab=32.91 E-value=4e+02 Score=24.58 Aligned_cols=61 Identities=20% Similarity=0.376 Sum_probs=46.2
Q ss_pred cCchhHHHHHHHHHhhhhcccccHHHHHHHhhCCcchHHHHHHHHHHhhhHHHHHhHHHHHHHHhh
Q 018271 235 GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN 300 (358)
Q Consensus 235 ~~~~~l~~~~~l~g~~~g~~~~~~~~~~~e~f~~~~~g~~~g~~~~~~~ig~~i~gp~i~g~l~~~ 300 (358)
.-+..++.+.++.|.+=|+..+...++++. .+.+-........+-+|.+ +.|.+...+...
T Consensus 93 ~l~~~l~~Gl~ll~~~Pggv~S~~~t~lAk----GnValsV~~tsvStll~~f-~tPllv~l~~~~ 153 (319)
T COG0385 93 PLPPELAVGLLLLGCCPGGVASNAMTYLAK----GNVALSVCSTSVSTLLGPF-LTPLLVGLLAGG 153 (319)
T ss_pred CCCHHHHHhHHheeeCCCchhHHHHHHHhc----CcHHHHHHHHHHHHHHHHH-HHHHHHHHHhcC
Confidence 344567888888888888887766666654 5777888888888888885 789988887763
No 313
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=31.45 E-value=1.1e+02 Score=19.27 Aligned_cols=6 Identities=17% Similarity=0.074 Sum_probs=2.2
Q ss_pred HHHHHH
Q 018271 334 FLLFIR 339 (358)
Q Consensus 334 ~~~~~~ 339 (358)
+.+.++
T Consensus 28 w~~~~~ 33 (49)
T PF05545_consen 28 WAYRPR 33 (49)
T ss_pred HHHccc
Confidence 333333
No 314
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=31.26 E-value=1.3e+02 Score=18.91 Aligned_cols=13 Identities=8% Similarity=0.358 Sum_probs=6.1
Q ss_pred hHHHHHHHHhhcc
Q 018271 290 SVRIIGYIYDNVA 302 (358)
Q Consensus 290 gp~i~g~l~~~~g 302 (358)
|.++++++.+..+
T Consensus 7 Ga~vGg~l~~~lg 19 (48)
T PF04226_consen 7 GAFVGGWLFGLLG 19 (48)
T ss_pred HHHHHHHHHHHhc
Confidence 3444555554443
No 315
>PRK10263 DNA translocase FtsK; Provisional
Probab=30.48 E-value=8.2e+02 Score=27.49 Aligned_cols=18 Identities=6% Similarity=0.111 Sum_probs=13.5
Q ss_pred HHHHHHhhhHhHHHHHHH
Q 018271 189 SIWNFLGRFGGGYVSDIV 206 (358)
Q Consensus 189 ~i~~~~g~~~~G~lsDr~ 206 (358)
..|+++|.++...+...+
T Consensus 141 ~gGGIIG~lLs~lL~~Lf 158 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLL 158 (1355)
T ss_pred cccchHHHHHHHHHHHHH
Confidence 457888888877777776
No 316
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=29.65 E-value=4.2e+02 Score=23.83 Aligned_cols=20 Identities=15% Similarity=0.080 Sum_probs=9.8
Q ss_pred hHHHHHHHHHHHHHhhhhHH
Q 018271 47 WARIITFLFLLFLLSSPLGI 66 (358)
Q Consensus 47 ~~~~~~~~~~~~ll~~~~~i 66 (358)
+......++.+.++++-..+
T Consensus 80 ~~~~~~~~Gfl~~~~ie~i~ 99 (317)
T PF02535_consen 80 LAFLIFLVGFLLFFFIERIL 99 (317)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555555544
No 317
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=28.28 E-value=2.3e+02 Score=24.68 Aligned_cols=60 Identities=17% Similarity=0.282 Sum_probs=33.4
Q ss_pred HHHHHHHHhhhHhHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHhhhh
Q 018271 187 LWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYG 252 (358)
Q Consensus 187 ~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~g~~~g 252 (358)
...+++.+|..+...+.||+ .+......+.....++.-.....+....++..++.|.-.|
T Consensus 10 aIl~G~~iG~~~~~~i~~~~------~~~l~~~~Gl~~l~iGi~~~~~~~~~~~vi~slvlG~iiG 69 (226)
T PF04474_consen 10 AILLGGLIGLLLGRRIPERI------KDTLMQALGLCVLAIGISMALKGQNPLLVILSLVLGTIIG 69 (226)
T ss_pred HHHHHHHHHHHHcCCCCHHH------HHHHHHHhhHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 34456777777777777777 4444555555555554443332333344555566665544
No 318
>PRK05978 hypothetical protein; Provisional
Probab=28.05 E-value=3.1e+02 Score=22.10 Aligned_cols=17 Identities=24% Similarity=0.792 Sum_probs=7.6
Q ss_pred hcccCchhHHHHHHHHH
Q 018271 40 NIFTFPLWARIITFLFL 56 (358)
Q Consensus 40 ~~~~~~~~~~~~~~~~~ 56 (358)
.....+.|.......++
T Consensus 92 ~~~~pp~w~~~~i~~~l 108 (148)
T PRK05978 92 TTFNLPVWLHLAIWLPI 108 (148)
T ss_pred HHcCCcHHHHHHHHHHH
Confidence 34445556543333333
No 319
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=26.93 E-value=3.1e+02 Score=24.44 Aligned_cols=19 Identities=11% Similarity=-0.020 Sum_probs=10.7
Q ss_pred HhhhchhHHHHHHHHHHhh
Q 018271 139 QSVCTLNFWLLFVAMLCGM 157 (358)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~ 157 (358)
..+.+|.||-.+...|+.-
T Consensus 202 t~ffspifikaFsltF~aE 220 (294)
T KOG2881|consen 202 TLFFSPIFIKAFSLTFLAE 220 (294)
T ss_pred HHhccHHHHHHHHHHHHHH
Confidence 3345566666666555544
No 320
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=25.86 E-value=1.2e+02 Score=27.18 Aligned_cols=12 Identities=8% Similarity=0.537 Sum_probs=5.4
Q ss_pred HHHHHHHHhhhh
Q 018271 241 YVGSIIVGVCYG 252 (358)
Q Consensus 241 ~~~~~l~g~~~g 252 (358)
++..++.|++..
T Consensus 45 ~~~~~lsG~~W~ 56 (269)
T PF06800_consen 45 FIVAFLSGAFWA 56 (269)
T ss_pred HHHHHHHHHHHH
Confidence 334445554443
No 321
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=25.38 E-value=1.2e+02 Score=27.12 Aligned_cols=30 Identities=13% Similarity=0.351 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 018271 315 FMLSFLIMASVAFVGCLVAFLLFIRTRRFY 344 (358)
Q Consensus 315 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (358)
|..+-+++.++.++..++..|+++|.++.+
T Consensus 261 cgiaalvllil~vvliiLYiWlyrrRK~sw 290 (295)
T TIGR01478 261 YGIAALVLIILTVVLIILYIWLYRRRKKSW 290 (295)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 555656666666666666666666554433
No 322
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=25.26 E-value=2.9e+02 Score=20.60 Aligned_cols=10 Identities=20% Similarity=0.248 Sum_probs=4.6
Q ss_pred HHHHHHHhhc
Q 018271 292 RIIGYIYDNV 301 (358)
Q Consensus 292 ~i~g~l~~~~ 301 (358)
...|...|..
T Consensus 60 ~~lG~WLD~~ 69 (100)
T TIGR02230 60 VAVGIWLDRH 69 (100)
T ss_pred HHHHHHHHhh
Confidence 3444445543
No 323
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=25.16 E-value=5.2e+02 Score=23.44 Aligned_cols=83 Identities=16% Similarity=0.002 Sum_probs=39.9
Q ss_pred cHHHhhhchhHHHHHHHHHHhhhhhhhHHhcHHHHHHhcCCCchhhHHH-HHHHHHHHHHhhhHhHHHHHHHhhhcCCch
Q 018271 136 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSL-VSLWSIWNFLGRFGGGYVSDIVLHRMGWER 214 (358)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~s~~~a~~~-~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr 214 (358)
..++..|+|+.+..........+..+....|.+ ..|.. .++++- ..-.-+.-.+|+++ +-||+ .|
T Consensus 61 ~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv----n~g~~-leaSLGY~InPL~~VllG~lf---lkErl------s~ 126 (293)
T COG2962 61 ELKQLLKQPKTLLMLALTALLIGLNWWLFIWAV----NNGHV-LEASLGYFINPLVNVLLGRLF---LKERL------SR 126 (293)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHhheec----CCCch-hHHHhHHHHHHHHHHHHHHHH---HHhhc------cH
Confidence 456678888777665544433322222222222 22222 233332 33333444566666 44887 55
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018271 215 PSFIAITLATMSVGHIVV 232 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~ 232 (358)
-..+.+.....++.....
T Consensus 127 ~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 127 LQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 555655555555444333
No 324
>PF11666 DUF2933: Protein of unknown function (DUF2933); InterPro: IPR021682 This bacterial family of proteins has no known function.
Probab=24.07 E-value=2.2e+02 Score=18.67 Aligned_cols=23 Identities=30% Similarity=0.314 Sum_probs=16.4
Q ss_pred chhHHHHHHHHHHHHHhhhhHHh
Q 018271 45 PLWARIITFLFLLFLLSSPLGIA 67 (358)
Q Consensus 45 ~~~~~~~~~~~~~~ll~~~~~i~ 67 (358)
..|..+....+.+++++-|+...
T Consensus 15 eh~~h~~~~lp~l~lL~CPLmhl 37 (55)
T PF11666_consen 15 EHRAHVLGALPYLLLLACPLMHL 37 (55)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH
Confidence 36777777777777777788654
No 325
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=23.46 E-value=8.5e+02 Score=25.34 Aligned_cols=21 Identities=24% Similarity=0.180 Sum_probs=11.2
Q ss_pred HHHHHHHHhhhHhHHHHHHHh
Q 018271 187 LWSIWNFLGRFGGGYVSDIVL 207 (358)
Q Consensus 187 ~~~i~~~~g~~~~G~lsDr~~ 207 (358)
+..+.+.+++++.-.+.|++-
T Consensus 165 ~l~i~~l~~p~~~q~viD~Vl 185 (709)
T COG2274 165 LLQLLALATPLFSQIVIDKVL 185 (709)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 334445555555556666653
No 326
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=22.69 E-value=71 Score=24.96 Aligned_cols=17 Identities=12% Similarity=0.356 Sum_probs=8.4
Q ss_pred hhHHHHHHHHHHHHHhh
Q 018271 46 LWARIITFLFLLFLLSS 62 (358)
Q Consensus 46 ~~~~~~~~~~~~~ll~~ 62 (358)
||.+++.++++++++++
T Consensus 1 RW~l~~iii~~i~l~~~ 17 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLF 17 (130)
T ss_pred CeeeHHHHHHHHHHHHH
Confidence 56665554444444433
No 327
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=20.93 E-value=1.7e+02 Score=26.00 Aligned_cols=13 Identities=15% Similarity=0.342 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHH
Q 018271 320 LIMASVAFVGCLV 332 (358)
Q Consensus 320 ~~~~~~~~~~~~~ 332 (358)
++..++.+++..+
T Consensus 119 ~~G~~l~~~~~~~ 131 (254)
T PF07857_consen 119 YIGVALVLVSGII 131 (254)
T ss_pred HHHHHHHHHHHHh
Confidence 3334444444433
No 328
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.51 E-value=5.9e+02 Score=24.86 Aligned_cols=32 Identities=31% Similarity=0.256 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHhhhHhHHHHHHHhhhcCCchHH
Q 018271 184 LVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 216 (358)
Q Consensus 184 ~~~~~~i~~~~g~~~~G~lsDr~~~k~~~gr~~ 216 (358)
+.+...+..++.+++.|+.+..+-+|.. ||+|
T Consensus 328 l~saaI~vYAlTs~i~GY~~gs~Y~r~g-G~~W 359 (593)
T KOG1277|consen 328 LLSAAIVVYALTSPINGYVSGSFYARLG-GRRW 359 (593)
T ss_pred HHHHHHHHHHhcccccccccceeeehhc-cHHH
Confidence 3333334444455555555543333322 5654
No 329
>PF11003 DUF2842: Protein of unknown function (DUF2842); InterPro: IPR021265 This bacterial family of proteins have no known function.
Probab=20.46 E-value=2.8e+02 Score=18.62 Aligned_cols=49 Identities=16% Similarity=0.457 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-Hhhcc-cCchhHHHHHHHHHHHHHhhhhH
Q 018271 17 HLNAFSAVALTIAAYLMIIII-LENIF-TFPLWARIITFLFLLFLLSSPLG 65 (358)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ll~~~~~ 65 (358)
++.+...+.+.+.+|.+...- ++... +.+.|.-....+.+..+..+|..
T Consensus 2 k~ig~v~ll~~l~vY~~~a~~l~~~~~~~~~~~~~l~~Yvv~G~~WvlP~~ 52 (62)
T PF11003_consen 2 KLIGLVLLLVGLPVYAVLAVTLADWLLARWPWWVQLIYYVVLGLLWVLPAK 52 (62)
T ss_pred ceehhHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHH
Confidence 345567788888888887764 44444 44455555555566666666664
Done!