BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018274
(358 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BCR|A Chain A, Complex Of The Wheat Serine Carboxypeptidase, Cpdw-Ii,
With The Microbial Peptide Aldehyde Inhibitor, Antipain,
And Arginine At Room Temperature
pdb|1BCS|A Chain A, Complex Of The Wheat Serine Carboxypeptidase, Cpdw-Ii,
With The Microbial Peptide Aldehyde Inhibitor,
Chymostatin, And Arginine At 100 Degrees Kelvin
Length = 263
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 39 GYVEVRPKA--HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY 96
GY+ V A +F+ L ++P ++P P++LWL GGPG S V G EE+G F
Sbjct: 27 GYITVDEGAGRSLFYLLQEAP----EDAQPAPLVLWLNGGPGCSSVAYGASEELGAFR-- 80
Query: 97 LKPRNS-------TWLKKADLLFVDNPVGTGYSYVEDNSS-FVKNDVEAANDLTTLLMEL 148
+KPR + W K A++LF+D+P G G+SY +S + D A+D L +
Sbjct: 81 VKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKW 140
Query: 149 FNKNEILQKSPLFIVAESYGGKFAATL 175
F + + +I ESY G + L
Sbjct: 141 FERFPHYKYRDFYIAGESYAGHYVPEL 167
>pdb|1WHT|A Chain A, Structure Of The Complex Of L-Benzylsuccinate With Wheat
Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution
Length = 256
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 39 GYVEVRPKA--HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY 96
GY+ V A +F+ L ++P ++P P++LWL GGPG S V G EE+G F
Sbjct: 23 GYITVDEGAGRSLFYLLQEAP----EDAQPAPLVLWLNGGPGCSSVAYGASEELGAFR-- 76
Query: 97 LKPRNS-------TWLKKADLLFVDNPVGTGYSYVEDNSS-FVKNDVEAANDLTTLLMEL 148
+KPR + W K A++LF+D+P G G+SY +S + D A+D L +
Sbjct: 77 VKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKW 136
Query: 149 FNKNEILQKSPLFIVAESYGGKFAATL 175
F + + +I ESY G + L
Sbjct: 137 FERFPHYKYRDFYIAGESYAGHYVPEL 163
>pdb|1WHS|A Chain A, Structure Of The Complex Of L-Benzylsuccinate With Wheat
Serine Carboxypeptidase Ii At 2.0 Angstroms Resolution
Length = 255
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 39 GYVEVRPKA--HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY 96
GY+ V A +F+ L ++P ++P P++LWL GGPG S V G EE+G F
Sbjct: 22 GYITVDEGAGRSLFYLLQEAP----EDAQPAPLVLWLNGGPGCSSVAYGASEELGAFR-- 75
Query: 97 LKPRNS-------TWLKKADLLFVDNPVGTGYSYVEDNSS-FVKNDVEAANDLTTLLMEL 148
+KPR + W K A++LF+D+P G G+SY +S + D A+D L +
Sbjct: 76 VKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKW 135
Query: 149 FNKNEILQKSPLFIVAESYGGKFAATL 175
F + + +I ESY G + L
Sbjct: 136 FERFPHYKYRDFYIAGESYAGHYVPEL 162
>pdb|3SC2|A Chain A, Refined Atomic Model Of Wheat Serine Carboxypeptidase Ii
At 2.2- Angstroms Resolution
Length = 259
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 39 GYVEVRPKA--HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY 96
GY+ V A +F+ L ++P ++P P++LWL GGPG S V G EE+G F
Sbjct: 27 GYITVDEGAGRSLFYLLQEAP----EDAQPAPLVLWLNGGPGCSSVAYGASEELGAFR-- 80
Query: 97 LKPRNS-------TWLKKADLLFVDNPVGTGYSYVEDNSS-FVKNDVEAANDLTTLLMEL 148
+KP + W K A++LF+D+P G G+SY +S + D A+D L +
Sbjct: 81 VKPAGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKW 140
Query: 149 FNKNEILQKSPLFIVAESYGGKFAATL 175
F + + +I ESY G + L
Sbjct: 141 FERFPHYKYRDFYIAGESYAGHYVPEL 167
>pdb|1IVY|A Chain A, Physiological Dimer Hpp Precursor
pdb|1IVY|B Chain B, Physiological Dimer Hpp Precursor
Length = 452
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF----- 93
GY++ H+ +W +S EN P++LWL GGPG S + G E GPF
Sbjct: 24 GYLKSSGSKHLHYWFVESQKDPENS----PVVLWLNGGPGCSSLD-GLLTEHGPFLVQPD 78
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNE 153
L+ +W A++L++++P G G+SY D+ + ND E A L + F
Sbjct: 79 GVTLEYNPYSWNLIANVLYLESPAGVGFSY-SDDKFYATNDTEVAQSNFEALQDFFRLFP 137
Query: 154 ILQKSPLFIVAESYGGKFAATLGLAAV 180
+ + LF+ ESY G + TL + +
Sbjct: 138 EYKNNKLFLTGESYAGIYIPTLAVLVM 164
>pdb|4AZ0|A Chain A, Crystal Structure Of Cathepsin A, Complexed With 8a.
pdb|4AZ3|A Chain A, Crystal Structure Of Cathepsin A, Complexed With 15a
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF----- 93
GY++ H+ +W +S EN P++LWL GGPG S + G E GPF
Sbjct: 26 GYLKGSGSKHLHYWFVESQKDPENS----PVVLWLNGGPGCSSLD-GLLTEHGPFLVQPD 80
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNE 153
L+ +W A++L++++P G G+SY D+ + ND E A L + F
Sbjct: 81 GVTLEYNPYSWNLIANVLYLESPAGVGFSY-SDDKFYATNDTEVAQSNFEALQDFFRLFP 139
Query: 154 ILQKSPLFIVAESYGGKFAATLGL 177
+ + LF+ ESY G + TL +
Sbjct: 140 EYKNNKLFLTGESYAGIYIPTLAV 163
>pdb|1WPX|A Chain A, Crystal Structure Of Carboxypeptidase Y Inhibitor
Complexed With The Cognate Proteinase
pdb|1YSC|A Chain A, 2.8 Angstroms Structure Of Yeast Serine Carboxypeptidase
Length = 421
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 14/153 (9%)
Query: 26 RALNKNQDASEEWGYVEVRPK-AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGI 84
+ L + + ++ GY++V + H F+W ++S +P+K P+ILWL GGPG S +
Sbjct: 6 KILGIDPNVTQYTGYLDVEDEDKHFFFWTFESR---NDPAKD-PVILWLNGGPGCSSL-T 60
Query: 85 GNFEEVGP--FDTYLKPRNS--TWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAAND 140
G F E+GP LKP + +W A ++F+D PV G+SY SS V N V A D
Sbjct: 61 GLFFELGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSY--SGSSGVSNTVAAGKD 118
Query: 141 LTTLLMELFNK-NEILQKSPLFIVA-ESYGGKF 171
+ L F++ E + K F +A ESY G +
Sbjct: 119 VYNFLELFFDQFPEYVNKGQDFHIAGESYAGHY 151
>pdb|1GXS|A Chain A, Crystal Structure Of Hydroxynitrile Lyase From Sorghum
Bicolor In Complex With Inhibitor Benzoic Acid: A Novel
Cyanogenic Enzyme
pdb|1GXS|C Chain C, Crystal Structure Of Hydroxynitrile Lyase From Sorghum
Bicolor In Complex With Inhibitor Benzoic Acid: A Novel
Cyanogenic Enzyme
Length = 270
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 69 IILWLQGGPGASGVGIGNFEEVGPFDTY-----LKPRNSTWLKKADLLFVDNPVGTGYSY 123
++LWL GGPG S +G+G +E+G F + L W K A++LF ++P G G+SY
Sbjct: 56 LVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSY 115
Query: 124 VEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175
+S D + A D T L++ F + +I ES G F L
Sbjct: 116 SNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES--GHFIPQL 165
>pdb|1CPY|A Chain A, Site-Directed Mutagenesis On (Serine) Carboxypeptidase Y
From Yeast. The Significance Of Thr 60 And Met 398 In
Hydrolysis And Aminolysis Reactions
Length = 421
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 26 RALNKNQDASEEWGYVEVRPK-AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGI 84
+ L + + ++ GY++V + H F+W ++S +P+K P+ILWL GGPG S +
Sbjct: 6 KILGIDPNVTQYTGYLDVEDEDKHFFFWTFESR---NDPAKD-PVILWLNGGPGCSSL-T 60
Query: 85 GNFEEVGP--FDTYLKPRNS--TWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAAND 140
G F +GP LKP + +W A ++F+D PV G+SY SS V N V A D
Sbjct: 61 GLFFALGPSSIGPDLKPIGNPYSWNSNATVIFLDQPVNVGFSY--SGSSGVSNTVAAGKD 118
Query: 141 LTTLLMELFNK-NEILQKSPLFIVA-ESYGGKF 171
+ L F++ E + K F +A SY G +
Sbjct: 119 VYNFLELFFDQFPEYVNKGQDFHIAGASYAGHY 151
>pdb|1AC5|A Chain A, Crystal Structure Of Kex1(delta)p, A Prohormone-processing
Carboxypeptidase From Saccharomyces Cerevisiae
Length = 483
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 68 PIILWLQGGPGASGVGIGNFEEVGPF----DTYLKPRNSTWLKKADLLFVDNPVGTGYSY 123
P+I+WL GGPG S + G E GPF D L +W+ K DLLF+D P GTG+S
Sbjct: 68 PLIIWLNGGPGCSSMD-GALVESGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFS- 125
Query: 124 VEDNSSFVKNDV----EAANDLTTLLME-LFNKNEILQKS---PLFIVAESYGGKF 171
VE N K D E D+T M+ L N +I + + + ESY G++
Sbjct: 126 VEQNKDEGKIDKNKFDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQY 181
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 126 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 175
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 126 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 175
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 118 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 167
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 153 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 202
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 143 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 192
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 144 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 193
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 167 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 216
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 141 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 190
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 141 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 190
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 127 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 176
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 127 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 176
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 127 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 176
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 133 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 182
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 94 DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144
+T +P + L DLL V + G Y+E+N F+ D+ A N L T
Sbjct: 141 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 190
>pdb|3LXU|X Chain X, Crystal Structure Of Tripeptidyl Peptidase 2 (Tpp Ii)
Length = 1354
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Query: 272 LLDSGMDPVSLTASTLAVGASMRKYSRY-------LSAHKSSTPDGDGDVGSLMNGVIKK 324
+ DSG+DP + TL G +++ RY + K TPD +G++ G+
Sbjct: 42 IFDSGVDPRATGLETLCDGKTVKVIERYDCSGCGDVDXKKKVTPDENGNI----KGLSGN 97
Query: 325 KLKIIPE 331
LK+ PE
Sbjct: 98 SLKLSPE 104
>pdb|3CUC|A Chain A, Crystal Structure Of A Fic Domain Containing Signaling
Protein (Bt_2513) From Bacteroides Thetaiotaomicron
Vpi-5482 At 2.71 A Resolution
pdb|3CUC|B Chain B, Crystal Structure Of A Fic Domain Containing Signaling
Protein (Bt_2513) From Bacteroides Thetaiotaomicron
Vpi-5482 At 2.71 A Resolution
Length = 291
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 22/96 (22%)
Query: 234 QKIKQQLEAGEF----------VGATDSWAQLESVISQNSNAVDFYNFLLDSG-MDPVSL 282
Q I+ Q++ GE+ G S+A E + ++ VD+YN D G + PV L
Sbjct: 122 QDIRXQIKVGEYKSRPNSVLTATGEVFSYASPEETPAFXTSLVDWYNLEADKGILTPVEL 181
Query: 283 TASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLM 318
A++ Y RY+ H DG+G + L+
Sbjct: 182 --------AALLHY-RYIRIHPFE--DGNGRIARLL 206
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 61 ENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF 93
+N + P P++LW+ GG G IG E PF
Sbjct: 73 DNTAGPVPVLLWIHGG----GFAIGTAESSDPF 101
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 61 ENPSKPWPIILWLQGGPGASGVGIGNFEEVGPF 93
+N + P P++LW+ GG G IG E PF
Sbjct: 73 DNTAGPVPVLLWIHGG----GFAIGTAESSDPF 101
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLK 98
WP+ L PG GVGI EEVGP T+LK
Sbjct: 49 WPVKPKLPLIPGHEGVGI--VEEVGPGVTHLK 78
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLK 98
WP+ L PG GVGI EEVGP T+LK
Sbjct: 49 WPVKPKLPLIPGHEGVGI--VEEVGPGVTHLK 78
>pdb|2Z3W|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a
pdb|2Z3Z|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a Complexd
With An Inhibitor
Length = 706
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 62 NPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYL 97
+P+K +P+I+++ GGP A V VG +D Y+
Sbjct: 480 DPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYM 515
>pdb|2D5L|A Chain A, Crystal Structure Of Prolyl Tripeptidyl Aminopeptidase
From Porphyromonas Gingivalis
pdb|2EEP|A Chain A, Prolyl Tripeptidyl Aminopeptidase Complexed With An
Inhibitor
Length = 706
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 62 NPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYL 97
+P+K +P+I+++ GGP A V VG +D Y+
Sbjct: 480 DPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYM 515
>pdb|2DCM|A Chain A, The Crystal Structure Of S603a Mutated Prolyl Tripeptidyl
Aminopeptidase Complexed With Substrate
Length = 706
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 62 NPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYL 97
+P+K +P+I+++ GGP A V VG +D Y+
Sbjct: 480 DPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYM 515
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 84 IGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDL 141
+G + G +LK +L+ L+ + + +G +YVE ++V D+ AAN L
Sbjct: 256 VGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-RMNYVHRDLRAANIL 312
>pdb|3DL7|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 534
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 70 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 116
Query: 75 GGPGASG 81
GG SG
Sbjct: 117 GGGFYSG 123
>pdb|2JGJ|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 535
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 70 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 116
Query: 75 GGPGASG 81
GG SG
Sbjct: 117 GGGFYSG 123
>pdb|2JGE|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
Length = 533
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 70 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 116
Query: 75 GGPGASG 81
GG SG
Sbjct: 117 GGGFYSG 123
>pdb|3DL7|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 538
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GGPGASG 81
GG SG
Sbjct: 120 GGGFYSG 126
>pdb|2JGE|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
pdb|2JGJ|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 536
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GGPGASG 81
GG SG
Sbjct: 120 GGGFYSG 126
>pdb|1KU6|A Chain A, Fasciculin 2-Mouse Acetylcholinesterase Complex
Length = 549
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GGPGASG 81
GG SG
Sbjct: 120 GGGFYSG 126
>pdb|1MAA|A Chain A, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|B Chain B, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|C Chain C, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|D Chain D, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
Length = 547
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GGPGASG 81
GG SG
Sbjct: 120 GGGFYSG 126
>pdb|4A16|A Chain A, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|B Chain B, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|C Chain C, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|D Chain D, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
Length = 545
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 13/62 (20%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 70 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 116
Query: 75 GG 76
GG
Sbjct: 117 GG 118
>pdb|1C2O|A Chain A, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|B Chain B, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|C Chain C, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|D Chain D, Electrophorus Electricus Acetylcholinesterase
Length = 539
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 69 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 115
Query: 75 GGPGASG 81
GG SG
Sbjct: 116 GGGFYSG 122
>pdb|1C2B|A Chain A, Electrophorus Electricus Acetylcholinesterase
Length = 540
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 70 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 116
Query: 75 GGPGASG 81
GG SG
Sbjct: 117 GGGFYSG 123
>pdb|2C0P|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0P|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0Q|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2C0Q|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2JEY|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2JEY|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2WHR|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|2WHR|B Chain B, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|4A23|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4A23|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4ARA|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARA|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARB|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution.
pdb|4ARB|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution
Length = 548
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 13/62 (20%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GG 76
GG
Sbjct: 120 GG 121
>pdb|2WHP|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
Length = 548
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 13/62 (20%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GG 76
GG
Sbjct: 120 GG 121
>pdb|2HA4|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA4|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA5|A Chain A, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA5|B Chain B, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA6|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA6|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA7|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
pdb|2HA7|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
Length = 543
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GGPGASG 81
GG SG
Sbjct: 120 GGGFYSG 126
>pdb|1Q83|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q83|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q84|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
pdb|1Q84|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
Length = 580
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 13/62 (20%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 104 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 150
Query: 75 GG 76
GG
Sbjct: 151 GG 152
>pdb|1MAH|A Chain A, Fasciculin2-Mouse Acetylcholinesterase Complex
pdb|1J06|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J06|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J07|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1J07|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1N5R|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|1N5R|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|2H9Y|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2H9Y|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2HA0|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA0|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA2|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA2|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2HA3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2GYU|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYU|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYV|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYV|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYW|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2GYW|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2WLS|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|2WLS|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|4BC0|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC1|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
Length = 543
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GGPGASG 81
GG SG
Sbjct: 120 GGGFYSG 126
>pdb|2XUD|A Chain A, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUD|B Chain B, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUH|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUH|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUI|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUI|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUJ|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUJ|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUK|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUK|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUO|A Chain A, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUO|B Chain B, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUP|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUP|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUQ|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
pdb|2XUQ|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
Length = 543
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 13/62 (20%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GG 76
GG
Sbjct: 120 GG 121
>pdb|2JGF|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGF|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGI|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGI|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGK|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGK|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGL|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGL|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGM|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGM|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JEZ|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JEZ|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JF0|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|2JF0|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|3DL4|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|3DL4|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|2WHP|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
pdb|2WHQ|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WHQ|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WU3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU4|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2WU4|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2Y2U|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2U|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2V|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
pdb|2Y2V|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
Length = 548
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 13/62 (20%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GG 76
GG
Sbjct: 120 GG 121
>pdb|2XUF|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUF|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUG|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
pdb|2XUG|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
Length = 544
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 13/62 (20%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GG 76
GG
Sbjct: 120 GG 121
>pdb|1N5M|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
pdb|1N5M|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
Length = 541
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 15 VSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQ 74
V L+ G N N++ SE+ Y+ V W +PY P+ P P+++W+
Sbjct: 73 VDTLYPGFEGTEMWNPNRELSEDCLYLNV--------W---TPY--PRPASPTPVLIWIY 119
Query: 75 GGPGASG 81
GG SG
Sbjct: 120 GGGFYSG 126
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,790,583
Number of Sequences: 62578
Number of extensions: 464181
Number of successful extensions: 1059
Number of sequences better than 100.0: 59
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1028
Number of HSP's gapped (non-prelim): 60
length of query: 358
length of database: 14,973,337
effective HSP length: 100
effective length of query: 258
effective length of database: 8,715,537
effective search space: 2248608546
effective search space used: 2248608546
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)