Query 018274
Match_columns 358
No_of_seqs 205 out of 1503
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 07:36:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018274.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018274hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 6.1E-75 1.3E-79 576.4 22.4 299 29-348 37-346 (454)
2 PF00450 Peptidase_S10: Serine 100.0 1E-69 2.2E-74 539.6 18.3 300 29-356 4-321 (415)
3 PTZ00472 serine carboxypeptida 100.0 3.4E-67 7.4E-72 529.5 24.7 288 30-356 41-355 (462)
4 PLN03016 sinapoylglucose-malat 100.0 3.5E-67 7.7E-72 524.2 23.0 288 30-353 31-336 (433)
5 KOG1283 Serine carboxypeptidas 100.0 6.2E-67 1.3E-71 485.3 13.0 318 34-358 1-318 (414)
6 PLN02209 serine carboxypeptida 100.0 1.7E-64 3.7E-69 505.0 25.3 291 29-353 32-340 (437)
7 COG2939 Carboxypeptidase C (ca 100.0 7E-51 1.5E-55 401.2 18.5 291 34-357 74-392 (498)
8 PLN02213 sinapoylglucose-malat 100.0 1.4E-44 3.1E-49 349.6 13.7 215 107-352 1-221 (319)
9 TIGR01250 pro_imino_pep_2 prol 98.7 5.4E-08 1.2E-12 89.7 8.2 108 67-204 25-133 (288)
10 TIGR03611 RutD pyrimidine util 98.6 7.4E-08 1.6E-12 87.5 7.8 106 66-204 12-117 (257)
11 TIGR01249 pro_imino_pep_1 prol 98.5 4.2E-07 9.1E-12 87.1 9.3 125 38-203 6-131 (306)
12 PF12697 Abhydrolase_6: Alpha/ 98.5 3.1E-07 6.7E-12 80.9 6.5 104 70-205 1-104 (228)
13 PLN02824 hydrolase, alpha/beta 98.4 4E-07 8.7E-12 86.3 7.2 104 68-202 30-137 (294)
14 PHA02857 monoglyceride lipase; 98.4 1.3E-06 2.8E-11 81.9 10.0 127 44-205 8-135 (276)
15 PRK10673 acyl-CoA esterase; Pr 98.4 6.1E-07 1.3E-11 82.5 7.2 99 66-199 15-113 (255)
16 PLN02298 hydrolase, alpha/beta 98.4 1.8E-06 4E-11 83.4 10.8 139 35-203 31-170 (330)
17 PRK06489 hypothetical protein; 98.4 2.8E-06 6.1E-11 83.4 11.8 113 67-201 69-188 (360)
18 PLN02385 hydrolase; alpha/beta 98.4 2.7E-06 5.8E-11 83.2 11.5 133 39-202 64-197 (349)
19 TIGR03056 bchO_mg_che_rel puta 98.3 2.3E-06 4.9E-11 79.3 9.6 105 67-204 28-132 (278)
20 PRK00870 haloalkane dehalogena 98.3 3.6E-06 7.7E-11 80.3 10.9 129 33-201 16-149 (302)
21 PRK11126 2-succinyl-6-hydroxy- 98.3 2.1E-06 4.6E-11 78.4 7.2 100 67-201 2-101 (242)
22 PRK03592 haloalkane dehalogena 98.2 2.7E-06 5.8E-11 80.7 7.7 103 68-204 28-130 (295)
23 PLN02652 hydrolase; alpha/beta 98.2 1.2E-05 2.6E-10 80.4 11.1 133 39-203 113-246 (395)
24 PRK03204 haloalkane dehalogena 98.1 6.3E-06 1.4E-10 78.4 8.0 122 37-202 15-136 (286)
25 TIGR03695 menH_SHCHC 2-succiny 98.1 5.8E-06 1.3E-10 73.8 7.2 102 68-201 2-104 (251)
26 PRK10749 lysophospholipase L2; 98.1 1E-05 2.2E-10 78.5 9.4 130 39-202 33-166 (330)
27 PF10340 DUF2424: Protein of u 98.1 6E-06 1.3E-10 81.2 7.4 135 48-206 105-239 (374)
28 PLN02578 hydrolase 98.1 9.6E-06 2.1E-10 79.6 8.9 99 68-200 87-185 (354)
29 TIGR02240 PHA_depoly_arom poly 98.1 7.6E-06 1.6E-10 76.9 6.8 102 68-203 26-127 (276)
30 TIGR02427 protocat_pcaD 3-oxoa 98.0 8.4E-06 1.8E-10 73.1 6.3 88 66-178 12-99 (251)
31 PLN02894 hydrolase, alpha/beta 98.0 1.7E-05 3.7E-10 79.4 8.3 107 66-201 104-210 (402)
32 PRK10349 carboxylesterase BioH 98.0 7E-06 1.5E-10 76.0 5.2 94 68-200 14-107 (256)
33 PLN02965 Probable pheophorbida 98.0 1.6E-05 3.5E-10 73.8 7.2 99 70-201 6-106 (255)
34 TIGR03343 biphenyl_bphD 2-hydr 98.0 4.1E-05 9E-10 71.5 9.8 103 68-200 31-134 (282)
35 PLN02679 hydrolase, alpha/beta 98.0 4.4E-05 9.6E-10 75.1 10.3 103 67-201 88-190 (360)
36 PLN03087 BODYGUARD 1 domain co 97.9 6.2E-05 1.3E-09 77.0 11.2 139 28-200 168-307 (481)
37 TIGR01738 bioH putative pimelo 97.9 1.6E-05 3.5E-10 71.1 5.6 95 68-201 5-99 (245)
38 PLN02211 methyl indole-3-aceta 97.9 4.7E-05 1E-09 72.1 8.1 105 65-201 16-121 (273)
39 PLN03084 alpha/beta hydrolase 97.8 8.5E-05 1.9E-09 74.0 10.0 105 67-202 127-232 (383)
40 TIGR03101 hydr2_PEP hydrolase, 97.8 0.00011 2.5E-09 69.5 9.0 131 46-208 9-140 (266)
41 PRK14875 acetoin dehydrogenase 97.7 9.3E-05 2E-09 72.1 7.5 101 67-201 131-231 (371)
42 KOG4409 Predicted hydrolase/ac 97.7 0.00014 3E-09 70.5 8.4 110 66-205 89-198 (365)
43 COG1506 DAP2 Dipeptidyl aminop 97.6 7.8E-05 1.7E-09 78.8 6.5 134 45-204 374-509 (620)
44 COG2267 PldB Lysophospholipase 97.6 0.0003 6.5E-09 67.7 9.9 138 35-205 8-145 (298)
45 KOG2564 Predicted acetyltransf 97.6 0.0002 4.2E-09 67.4 7.6 106 65-197 72-177 (343)
46 PRK05855 short chain dehydroge 97.6 0.00023 5E-09 73.5 8.7 84 67-172 25-108 (582)
47 PLN02980 2-oxoglutarate decarb 97.6 0.00034 7.3E-09 81.5 10.9 103 67-200 1371-1478(1655)
48 PRK05077 frsA fermentation/res 97.5 0.00044 9.6E-09 69.6 9.1 80 107-203 222-301 (414)
49 COG0596 MhpC Predicted hydrola 97.5 0.00036 7.8E-09 61.5 7.3 104 67-203 21-124 (282)
50 TIGR01840 esterase_phb esteras 97.5 0.0004 8.7E-09 63.0 7.7 113 65-201 11-129 (212)
51 PLN02511 hydrolase 97.4 0.001 2.2E-08 66.3 10.5 117 39-176 74-191 (388)
52 KOG1455 Lysophospholipase [Lip 97.3 0.0017 3.6E-08 62.0 10.2 136 36-201 27-163 (313)
53 PRK10566 esterase; Provisional 97.3 0.00059 1.3E-08 62.8 7.1 96 66-177 26-126 (249)
54 TIGR01607 PST-A Plasmodium sub 97.3 0.0011 2.3E-08 64.7 9.0 96 106-203 73-186 (332)
55 PRK08775 homoserine O-acetyltr 97.3 0.00045 9.9E-09 67.3 6.4 75 106-202 98-173 (343)
56 cd00707 Pancreat_lipase_like P 97.3 0.00027 5.7E-09 67.3 4.4 109 66-199 35-144 (275)
57 TIGR03100 hydr1_PEP hydrolase, 97.1 0.0013 2.8E-08 62.2 7.4 109 68-204 27-136 (274)
58 PLN02442 S-formylglutathione h 97.1 0.002 4.4E-08 61.3 8.7 57 137-205 125-181 (283)
59 TIGR03230 lipo_lipase lipoprot 97.1 0.0012 2.5E-08 66.9 7.2 111 66-200 40-152 (442)
60 PRK10985 putative hydrolase; P 97.1 0.0037 8.1E-08 60.5 10.3 120 34-176 29-149 (324)
61 PF00561 Abhydrolase_1: alpha/ 97.1 0.00056 1.2E-08 61.0 4.0 77 108-201 1-78 (230)
62 KOG4178 Soluble epoxide hydrol 97.0 0.0051 1.1E-07 59.3 10.4 156 32-223 18-179 (322)
63 TIGR02821 fghA_ester_D S-formy 97.0 0.0056 1.2E-07 57.9 10.4 41 156-205 136-176 (275)
64 PRK07581 hypothetical protein; 97.0 0.0012 2.7E-08 63.9 5.9 83 106-201 70-158 (339)
65 KOG1515 Arylacetamide deacetyl 96.9 0.0058 1.3E-07 59.8 10.0 144 39-204 64-209 (336)
66 PRK00175 metX homoserine O-ace 96.8 0.0086 1.9E-07 59.4 10.3 126 47-201 33-181 (379)
67 COG3509 LpqC Poly(3-hydroxybut 96.7 0.02 4.4E-07 54.5 11.4 141 8-178 11-164 (312)
68 PF00975 Thioesterase: Thioest 96.7 0.0048 1E-07 55.9 7.1 101 69-201 2-103 (229)
69 PF12695 Abhydrolase_5: Alpha/ 96.6 0.0042 9.1E-08 51.7 5.3 95 69-203 1-96 (145)
70 PLN00021 chlorophyllase 96.4 0.0051 1.1E-07 59.6 5.8 111 66-202 51-166 (313)
71 TIGR00976 /NonD putative hydro 96.3 0.011 2.3E-07 61.8 7.7 133 42-205 2-135 (550)
72 PRK10115 protease 2; Provision 96.3 0.0095 2.1E-07 63.8 7.2 121 66-208 444-565 (686)
73 TIGR01392 homoserO_Ac_trn homo 96.2 0.034 7.3E-07 54.4 10.1 128 46-202 15-162 (351)
74 KOG4391 Predicted alpha/beta h 96.0 0.014 3E-07 53.4 5.6 108 67-203 78-185 (300)
75 PRK10162 acetyl esterase; Prov 95.9 0.011 2.5E-07 57.1 5.3 45 157-204 153-197 (318)
76 PF00326 Peptidase_S9: Prolyl 95.9 0.0031 6.8E-08 56.8 1.3 94 106-209 13-106 (213)
77 PLN02872 triacylglycerol lipas 95.9 0.064 1.4E-06 53.8 10.5 125 34-172 42-174 (395)
78 PF10230 DUF2305: Uncharacteri 95.8 0.027 5.9E-07 53.3 7.4 114 67-200 2-120 (266)
79 PF10503 Esterase_phd: Esteras 95.8 0.034 7.3E-07 51.3 7.4 39 154-201 93-131 (220)
80 PRK11071 esterase YqiA; Provis 95.8 0.016 3.5E-07 51.8 5.2 94 68-205 2-96 (190)
81 KOG1454 Predicted hydrolase/ac 95.7 0.033 7.1E-07 54.4 7.5 94 66-181 57-151 (326)
82 cd00312 Esterase_lipase Estera 95.2 0.047 1E-06 55.8 6.9 34 142-176 161-194 (493)
83 PRK11460 putative hydrolase; P 95.0 0.074 1.6E-06 49.1 7.0 37 140-177 86-122 (232)
84 KOG2100 Dipeptidyl aminopeptid 94.9 0.041 8.8E-07 59.6 5.7 148 36-205 498-647 (755)
85 PF06500 DUF1100: Alpha/beta h 94.8 0.014 2.9E-07 58.5 1.7 80 106-202 217-296 (411)
86 TIGR03502 lipase_Pla1_cef extr 94.5 0.1 2.3E-06 56.4 7.7 99 65-178 447-575 (792)
87 PRK13604 luxD acyl transferase 94.5 0.26 5.7E-06 47.6 9.6 132 40-205 13-144 (307)
88 PF02230 Abhydrolase_2: Phosph 94.1 0.047 1E-06 49.5 3.5 60 135-205 84-143 (216)
89 PF05577 Peptidase_S28: Serine 94.1 0.16 3.4E-06 51.3 7.5 125 107-241 59-188 (434)
90 COG4099 Predicted peptidase [G 94.0 0.5 1.1E-05 45.4 10.0 149 9-179 126-290 (387)
91 PF00151 Lipase: Lipase; Inte 93.5 0.032 6.9E-07 54.6 1.2 71 106-181 103-173 (331)
92 PF07859 Abhydrolase_3: alpha/ 93.4 0.16 3.4E-06 45.4 5.6 64 136-204 47-112 (211)
93 KOG1552 Predicted alpha/beta h 93.2 0.26 5.6E-06 46.2 6.7 109 67-208 60-169 (258)
94 KOG1838 Alpha/beta hydrolase [ 92.6 0.47 1E-05 47.5 7.9 114 65-202 123-236 (409)
95 PLN02454 triacylglycerol lipas 92.3 0.32 6.9E-06 48.8 6.4 70 133-204 204-273 (414)
96 PRK10252 entF enterobactin syn 91.9 0.55 1.2E-05 53.6 8.6 101 68-200 1069-1169(1296)
97 PF01764 Lipase_3: Lipase (cla 91.7 0.29 6.3E-06 40.7 4.7 63 136-203 45-107 (140)
98 PF05728 UPF0227: Uncharacteri 91.6 0.44 9.5E-06 42.8 6.0 59 132-209 40-98 (187)
99 cd00741 Lipase Lipase. Lipase 91.1 0.54 1.2E-05 40.1 5.8 61 135-202 8-68 (153)
100 PF07819 PGAP1: PGAP1-like pro 91.1 1.1 2.4E-05 41.2 8.2 119 68-205 5-127 (225)
101 cd00519 Lipase_3 Lipase (class 91.0 0.47 1E-05 43.3 5.7 66 131-203 104-169 (229)
102 PF05990 DUF900: Alpha/beta hy 90.3 0.6 1.3E-05 43.3 5.8 69 136-207 74-142 (233)
103 PRK06765 homoserine O-acetyltr 89.8 3.4 7.4E-05 41.3 11.1 53 132-200 141-194 (389)
104 PRK04940 hypothetical protein; 89.3 1.3 2.7E-05 39.6 6.7 61 133-208 38-98 (180)
105 KOG3975 Uncharacterized conser 89.1 1.4 3.1E-05 41.3 7.0 94 65-172 27-124 (301)
106 smart00824 PKS_TE Thioesterase 88.2 1.8 4E-05 37.5 7.1 78 105-200 23-100 (212)
107 PF02129 Peptidase_S15: X-Pro 88.0 0.37 8.1E-06 45.3 2.6 85 106-206 56-140 (272)
108 PLN02571 triacylglycerol lipas 87.9 1.7 3.7E-05 43.8 7.3 71 135-206 204-279 (413)
109 COG0400 Predicted esterase [Ge 87.7 1.9 4.2E-05 39.3 7.0 81 133-223 75-158 (207)
110 PF06057 VirJ: Bacterial virul 87.4 1.3 2.8E-05 39.9 5.6 59 131-197 44-102 (192)
111 COG0657 Aes Esterase/lipase [L 87.3 2.6 5.7E-05 40.2 8.1 45 157-206 151-195 (312)
112 PF11144 DUF2920: Protein of u 87.0 1.1 2.5E-05 44.7 5.5 62 136-206 161-223 (403)
113 PF05677 DUF818: Chlamydia CHL 87.0 1.2 2.6E-05 43.6 5.4 60 106-173 170-230 (365)
114 KOG4627 Kynurenine formamidase 85.7 2.3 4.9E-05 39.0 6.2 71 118-202 102-172 (270)
115 PRK10439 enterobactin/ferric e 84.9 3.5 7.5E-05 41.6 7.8 53 137-201 269-322 (411)
116 KOG2183 Prolylcarboxypeptidase 84.8 1.2 2.6E-05 44.6 4.3 67 107-175 111-184 (492)
117 COG3319 Thioesterase domains o 84.0 4.4 9.5E-05 38.3 7.6 103 68-203 1-104 (257)
118 PF11288 DUF3089: Protein of u 83.8 1.7 3.6E-05 39.7 4.5 40 134-175 73-112 (207)
119 PLN02733 phosphatidylcholine-s 83.2 3.8 8.1E-05 41.8 7.3 52 118-177 130-181 (440)
120 KOG3724 Negative regulator of 82.7 14 0.00031 40.1 11.3 153 7-172 21-196 (973)
121 PF08538 DUF1749: Protein of u 82.2 7.9 0.00017 37.4 8.7 72 132-207 81-153 (303)
122 TIGR01836 PHA_synth_III_C poly 82.2 1.8 4E-05 42.1 4.5 78 107-203 94-172 (350)
123 COG2272 PnbA Carboxylesterase 81.9 2.8 6.1E-05 42.9 5.7 32 143-175 166-197 (491)
124 PRK05371 x-prolyl-dipeptidyl a 81.8 2.2 4.7E-05 46.6 5.3 85 106-205 278-376 (767)
125 PRK14567 triosephosphate isome 81.2 3.7 8.1E-05 38.6 5.9 63 135-207 178-240 (253)
126 PRK14566 triosephosphate isome 81.1 3.5 7.7E-05 38.9 5.8 63 135-207 188-250 (260)
127 PLN02934 triacylglycerol lipas 80.6 3.4 7.3E-05 42.6 5.8 39 139-180 305-343 (515)
128 PF12740 Chlorophyllase2: Chlo 80.2 5.7 0.00012 37.5 6.8 64 133-200 62-129 (259)
129 PF03283 PAE: Pectinacetyleste 80.2 9.2 0.0002 37.9 8.6 127 68-203 51-198 (361)
130 PLN02324 triacylglycerol lipas 80.0 5.9 0.00013 39.9 7.2 72 133-205 191-268 (415)
131 COG0429 Predicted hydrolase of 80.0 6.1 0.00013 38.6 7.0 110 67-201 75-185 (345)
132 PF12146 Hydrolase_4: Putative 79.8 5.1 0.00011 30.6 5.3 77 48-146 3-79 (79)
133 PLN02761 lipase class 3 family 77.4 7.8 0.00017 40.1 7.3 73 134-206 267-346 (527)
134 PLN02753 triacylglycerol lipas 77.0 7.6 0.00017 40.2 7.1 74 133-206 285-363 (531)
135 PF05448 AXE1: Acetyl xylan es 76.3 18 0.00039 35.2 9.2 56 137-203 155-210 (320)
136 KOG2182 Hydrolytic enzymes of 75.7 14 0.0003 38.0 8.5 67 108-175 119-189 (514)
137 PF08237 PE-PPE: PE-PPE domain 75.5 7.7 0.00017 35.8 6.2 64 130-201 25-89 (225)
138 COG3208 GrsT Predicted thioest 75.5 9.4 0.0002 35.7 6.7 64 107-180 33-96 (244)
139 PLN02719 triacylglycerol lipas 75.4 8.6 0.00019 39.7 7.0 74 134-207 272-350 (518)
140 PLN00413 triacylglycerol lipas 74.9 6.8 0.00015 40.1 6.1 38 140-180 269-306 (479)
141 KOG2382 Predicted alpha/beta h 74.8 6.9 0.00015 38.0 5.8 53 109-169 82-134 (315)
142 PLN02408 phospholipase A1 74.0 9.6 0.00021 37.8 6.7 66 136-205 179-244 (365)
143 PLN02429 triosephosphate isome 73.4 7.9 0.00017 37.6 5.9 63 135-207 238-301 (315)
144 KOG2565 Predicted hydrolases o 72.4 28 0.00061 34.8 9.3 114 65-204 151-266 (469)
145 PLN02162 triacylglycerol lipas 72.4 11 0.00023 38.7 6.7 39 139-180 262-300 (475)
146 PF11187 DUF2974: Protein of u 71.8 8 0.00017 35.7 5.3 36 142-181 72-107 (224)
147 PF05057 DUF676: Putative seri 71.1 7.3 0.00016 35.5 4.9 45 132-177 53-97 (217)
148 COG0627 Predicted esterase [Ge 70.6 9.5 0.00021 37.1 5.8 107 65-178 52-172 (316)
149 KOG2984 Predicted hydrolase [G 69.7 6.1 0.00013 36.2 3.9 108 40-179 25-135 (277)
150 PLN02802 triacylglycerol lipas 69.5 11 0.00024 38.9 6.2 66 136-205 309-374 (509)
151 PF06342 DUF1057: Alpha/beta h 69.5 27 0.00059 33.5 8.3 100 67-201 35-136 (297)
152 KOG4569 Predicted lipase [Lipi 68.2 7.5 0.00016 38.1 4.6 59 141-204 157-215 (336)
153 COG4757 Predicted alpha/beta h 67.5 7.8 0.00017 36.2 4.2 69 106-178 56-125 (281)
154 PLN02847 triacylglycerol lipas 67.2 6.1 0.00013 41.6 3.8 64 135-205 231-295 (633)
155 COG5510 Predicted small secret 65.6 5.6 0.00012 26.9 2.1 22 1-22 2-23 (44)
156 KOG1553 Predicted alpha/beta h 65.4 16 0.00034 36.2 5.9 101 68-201 244-344 (517)
157 PRK00042 tpiA triosephosphate 65.2 17 0.00036 34.2 6.1 62 135-207 179-241 (250)
158 PLN02310 triacylglycerol lipas 64.4 14 0.00031 37.1 5.8 65 136-204 186-251 (405)
159 TIGR01838 PHA_synth_I poly(R)- 64.2 23 0.0005 37.1 7.4 85 107-204 220-304 (532)
160 PF00121 TIM: Triosephosphate 63.6 5.4 0.00012 37.3 2.5 63 135-207 177-240 (244)
161 PLN02561 triosephosphate isome 63.3 13 0.00029 34.9 5.0 60 135-204 179-239 (253)
162 COG1647 Esterase/lipase [Gener 63.3 29 0.00063 32.2 7.0 101 69-203 17-119 (243)
163 PRK14565 triosephosphate isome 62.6 17 0.00036 34.0 5.5 56 134-207 172-227 (237)
164 PF08840 BAAT_C: BAAT / Acyl-C 62.4 10 0.00022 34.4 4.0 33 147-179 11-43 (213)
165 PF01083 Cutinase: Cutinase; 62.2 13 0.00029 32.8 4.6 81 110-204 42-125 (179)
166 PRK07868 acyl-CoA synthetase; 61.7 23 0.00051 39.8 7.5 90 66-177 66-160 (994)
167 cd00311 TIM Triosephosphate is 60.4 23 0.00049 33.2 6.0 61 136-207 176-237 (242)
168 KOG2281 Dipeptidyl aminopeptid 58.9 20 0.00044 38.1 5.8 112 62-205 637-765 (867)
169 PF06259 Abhydrolase_8: Alpha/ 58.0 18 0.00039 32.2 4.7 63 106-175 62-126 (177)
170 PLN03037 lipase class 3 family 57.6 27 0.00058 36.3 6.4 66 137-205 296-362 (525)
171 KOG3079 Uridylate kinase/adeny 57.5 6.6 0.00014 35.3 1.7 15 66-80 6-20 (195)
172 PF06028 DUF915: Alpha/beta hy 55.6 19 0.00042 33.9 4.7 64 133-202 81-144 (255)
173 PTZ00333 triosephosphate isome 54.8 22 0.00049 33.5 5.0 61 134-204 181-242 (255)
174 COG3150 Predicted esterase [Ge 54.8 22 0.00049 31.5 4.6 60 130-208 38-97 (191)
175 PF07172 GRP: Glycine rich pro 54.3 11 0.00023 30.1 2.3 25 3-28 4-28 (95)
176 PF10081 Abhydrolase_9: Alpha/ 54.0 18 0.00039 34.6 4.2 38 133-170 84-121 (289)
177 COG4782 Uncharacterized protei 53.4 26 0.00057 34.7 5.3 47 157-207 190-239 (377)
178 PRK10081 entericidin B membran 53.2 11 0.00024 26.1 2.0 22 1-22 2-23 (48)
179 PRK13962 bifunctional phosphog 52.2 26 0.00056 37.5 5.4 63 135-207 574-637 (645)
180 KOG3101 Esterase D [General fu 50.8 17 0.00036 33.6 3.2 41 158-207 141-181 (283)
181 PF03583 LIP: Secretory lipase 48.9 53 0.0011 31.3 6.6 67 137-207 47-118 (290)
182 PF00135 COesterase: Carboxyle 48.5 4.2 9E-05 41.5 -1.1 32 143-175 194-225 (535)
183 PF00756 Esterase: Putative es 47.5 14 0.00031 33.6 2.4 58 135-205 96-153 (251)
184 PF02450 LCAT: Lecithin:choles 47.4 39 0.00084 33.7 5.7 41 135-179 100-140 (389)
185 COG0149 TpiA Triosephosphate i 46.7 52 0.0011 31.0 6.0 70 117-208 171-241 (251)
186 KOG1516 Carboxylesterase and r 46.0 59 0.0013 33.6 7.0 33 143-176 181-213 (545)
187 PRK15492 triosephosphate isome 45.5 45 0.00097 31.5 5.4 62 135-207 188-250 (260)
188 PRK13792 lysozyme inhibitor; P 45.4 12 0.00027 31.4 1.5 23 1-25 1-23 (127)
189 PF07519 Tannase: Tannase and 45.1 89 0.0019 32.2 8.0 52 143-207 104-155 (474)
190 PF01738 DLH: Dienelactone hyd 44.2 18 0.0004 32.3 2.6 42 134-176 75-116 (218)
191 PF05576 Peptidase_S37: PS-10 42.3 64 0.0014 32.7 6.1 88 65-172 61-148 (448)
192 KOG2369 Lecithin:cholesterol a 42.3 34 0.00073 35.0 4.3 41 139-179 162-203 (473)
193 PF07224 Chlorophyllase: Chlor 40.7 24 0.00053 33.6 2.8 34 157-197 119-152 (307)
194 PF03403 PAF-AH_p_II: Platelet 40.6 15 0.00033 36.6 1.5 38 159-206 229-266 (379)
195 COG2945 Predicted hydrolase of 40.0 31 0.00067 31.3 3.2 62 109-178 62-123 (210)
196 PRK10259 hypothetical protein; 38.3 35 0.00076 26.7 2.9 44 1-45 1-44 (86)
197 PF03096 Ndr: Ndr family; Int 37.7 29 0.00062 33.3 2.8 121 66-216 22-144 (283)
198 TIGR00547 lolA periplasmic cha 37.2 77 0.0017 28.7 5.5 19 38-57 58-76 (204)
199 TIGR03656 IsdC heme uptake pro 37.0 23 0.00051 32.5 2.0 29 1-29 1-29 (217)
200 TIGR00419 tim triosephosphate 36.1 59 0.0013 29.6 4.5 54 136-204 151-204 (205)
201 PF06309 Torsin: Torsin; Inte 35.8 31 0.00067 29.0 2.4 15 66-80 51-65 (127)
202 PLN02606 palmitoyl-protein thi 35.6 1.9E+02 0.0041 28.1 8.0 43 129-176 71-113 (306)
203 COG4425 Predicted membrane pro 35.4 47 0.001 34.0 4.0 40 131-170 370-409 (588)
204 TIGR03712 acc_sec_asp2 accesso 34.3 81 0.0018 32.6 5.5 105 65-204 288-392 (511)
205 PF09292 Neil1-DNA_bind: Endon 32.0 27 0.00059 22.8 1.1 12 68-79 25-36 (39)
206 KOG1643 Triosephosphate isomer 31.5 87 0.0019 28.7 4.6 62 134-206 176-239 (247)
207 COG0412 Dienelactone hydrolase 31.2 78 0.0017 29.2 4.6 42 135-177 90-131 (236)
208 PRK06762 hypothetical protein; 30.5 31 0.00067 29.4 1.7 13 68-80 2-14 (166)
209 COG3571 Predicted hydrolase of 30.4 33 0.00071 30.4 1.8 26 154-179 85-110 (213)
210 PF02402 Lysis_col: Lysis prot 30.2 30 0.00064 23.5 1.1 20 1-22 1-20 (46)
211 COG3017 LolB Outer membrane li 29.6 1.6E+02 0.0034 26.9 6.0 41 39-82 59-104 (206)
212 KOG2931 Differentiation-relate 29.3 93 0.002 30.2 4.7 108 66-200 45-155 (326)
213 COG3673 Uncharacterized conser 27.5 2E+02 0.0043 28.4 6.6 66 107-177 65-141 (423)
214 PLN02517 phosphatidylcholine-s 26.2 1E+02 0.0022 32.9 4.7 21 157-177 212-232 (642)
215 PRK14905 triosephosphate isome 25.2 1.4E+02 0.0031 29.5 5.5 63 134-207 188-251 (355)
216 COG5567 Predicted small peripl 25.2 69 0.0015 22.9 2.3 21 1-22 1-21 (58)
217 PF11777 DUF3316: Protein of u 25.1 73 0.0016 25.9 2.9 19 1-20 1-19 (114)
218 COG4808 Uncharacterized protei 24.9 59 0.0013 27.7 2.3 23 1-23 1-25 (152)
219 PF06821 Ser_hydrolase: Serine 23.7 1.3E+02 0.0028 26.3 4.4 39 157-203 54-92 (171)
220 PRK10781 rcsF outer membrane l 23.7 65 0.0014 27.3 2.3 27 7-33 2-28 (133)
221 PF04414 tRNA_deacylase: D-ami 23.6 1.6E+02 0.0035 27.0 5.1 100 68-181 30-151 (213)
222 KOG2541 Palmitoyl protein thio 23.0 2E+02 0.0044 27.5 5.7 85 67-177 24-111 (296)
223 PF01583 APS_kinase: Adenylyls 23.0 51 0.0011 28.7 1.6 14 67-80 1-14 (156)
224 KOG4540 Putative lipase essent 22.8 75 0.0016 30.7 2.8 33 143-175 261-293 (425)
225 COG5153 CVT17 Putative lipase 22.8 75 0.0016 30.7 2.8 33 143-175 261-293 (425)
226 PF13627 LPAM_2: Prokaryotic l 22.7 69 0.0015 18.9 1.6 14 10-23 4-17 (24)
227 PF11104 PilM_2: Type IV pilus 22.3 1.4E+02 0.003 28.9 4.8 48 133-183 251-298 (340)
228 PF09680 Tiny_TM_bacill: Prote 21.9 80 0.0017 18.6 1.7 18 4-21 6-23 (24)
229 COG2819 Predicted hydrolase of 21.9 1.1E+02 0.0024 29.0 3.7 16 157-172 136-151 (264)
230 PF00681 Plectin: Plectin repe 21.6 53 0.0011 22.0 1.2 31 200-230 12-42 (45)
231 COG1770 PtrB Protease II [Amin 21.6 1.1E+02 0.0024 32.7 4.0 61 137-208 507-568 (682)
232 KOG4667 Predicted esterase [Li 21.6 1.7E+02 0.0037 27.3 4.7 102 110-224 65-166 (269)
233 PF05436 MF_alpha_N: Mating fa 21.5 1.1E+02 0.0024 23.9 3.1 12 38-49 39-50 (86)
234 COG1075 LipA Predicted acetylt 21.5 1.1E+02 0.0025 29.7 4.0 44 133-179 105-148 (336)
235 PRK03995 hypothetical protein; 21.2 1.5E+02 0.0033 28.1 4.6 46 133-181 157-202 (267)
236 PF05277 DUF726: Protein of un 21.1 3.4E+02 0.0075 26.8 7.2 59 136-202 203-261 (345)
237 TIGR03044 PS_II_psb27 photosys 21.1 83 0.0018 26.7 2.4 17 8-24 12-28 (135)
238 TIGR01653 lactococcin_972 bact 21.0 70 0.0015 25.4 1.9 24 1-26 1-24 (92)
239 COG5633 Predicted periplasmic 20.6 69 0.0015 26.6 1.8 27 1-31 1-27 (123)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-75 Score=576.39 Aligned_cols=299 Identities=24% Similarity=0.412 Sum_probs=244.1
Q ss_pred CCCCCCcceeeEEEecC--CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCccc-----CccCc
Q 018274 29 NKNQDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY-----LKPRN 101 (358)
Q Consensus 29 ~~~~~~~~~~Gy~~v~~--~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~-----~~~n~ 101 (358)
..+.++++++|||+|++ +.+|||||+||+ ++|++ +||||||||||||||++ |+|.|+|||+++ |..|+
T Consensus 37 ~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~---~~P~~-dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ 111 (454)
T KOG1282|consen 37 PGPLPFKQYSGYVTVNESEGRQLFYWFFESE---NNPET-DPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNP 111 (454)
T ss_pred CCCCCcccccceEECCCCCCceEEEEEEEcc---CCCCC-CCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCC
Confidence 34467999999999985 589999999984 46754 49999999999999995 999999999986 67899
Q ss_pred cccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHH
Q 018274 102 STWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (358)
Q Consensus 102 ~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 181 (358)
+|||+.||||||||||||||||++++..+.++|+.+|+|++.||++||++||||++|||||+||||||||||+||++|++
T Consensus 112 ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~ 191 (454)
T KOG1282|consen 112 YSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILK 191 (454)
T ss_pred ccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHh
Confidence 99999999999999999999999887777789999999999999999999999999999999999999999999999999
Q ss_pred HHHhC-cceeeeeeeeccCccCChhhhhhhhhhhhhhcCCCChhhHHHHHHHHHHHHHHHHcCCccchHHHHHHHHHHHH
Q 018274 182 AIEAG-KLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVIS 260 (358)
Q Consensus 182 ~~~~~-~~~inlkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~~~~~~~~i~~~~~~~a~~~~~~~~~~i~ 260 (358)
.|+.. ...|||||++||||++||..+..++.+|++.+|+|+++.++.+++.+..+... -.+.......|..+++.+.
T Consensus 192 ~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~--~~~~~~~~~~C~~~~~~~~ 269 (454)
T KOG1282|consen 192 GNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDN--YANVDPSNTKCNKAVEEFD 269 (454)
T ss_pred ccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCccc--ccccCCchhHHHHHHHHHH
Confidence 88753 46799999999999999999999999999999999999888776532111110 1112223557887777665
Q ss_pred -hccCCccccccccccCCCcccchhhhhhhccchhhHHHhhhccCCCCCCCCchhhhhccHH-HHHHhCCCCCCC-cccc
Q 018274 261 -QNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNGV-IKKKLKIIPENI-TWGG 337 (358)
Q Consensus 261 -~~~~~vn~YdI~~~~~~~~~~~~~~~~~~~~~~~~y~~yl~~~~~~~p~~~~~l~~fLN~~-Vr~aL~i~~~~~-~W~~ 337 (358)
...++++.|+++.++|... +. .. +......+.+||.++..++|||++ ||+||||..... +|+.
T Consensus 270 ~~~~~~i~~y~i~~~~C~~~-~~-------~~------~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~ 335 (454)
T KOG1282|consen 270 SKTTGDIDNYYILTPDCYPT-SY-------EL------KKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWER 335 (454)
T ss_pred HHHhccCchhhhcchhhccc-cc-------cc------cccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccc
Confidence 5567899999988876541 10 00 000001246889666669999996 999999965544 7999
Q ss_pred ccHHHHHHhhh
Q 018274 338 QSDSVFTELSG 348 (358)
Q Consensus 338 Cs~~V~~~~~~ 348 (358)
||+.|+..+..
T Consensus 336 Cn~~v~~~~~~ 346 (454)
T KOG1282|consen 336 CNDEVNYNYND 346 (454)
T ss_pred cChhhhccccc
Confidence 99999875433
No 2
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=1e-69 Score=539.58 Aligned_cols=300 Identities=31% Similarity=0.554 Sum_probs=228.3
Q ss_pred CCCCCCcceeeEEEec--CCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCccc------CccC
Q 018274 29 NKNQDASEEWGYVEVR--PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY------LKPR 100 (358)
Q Consensus 29 ~~~~~~~~~~Gy~~v~--~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~------~~~n 100 (358)
..+.++++++|||+|+ ..++|||||||+++ +| +++||||||||||||||| .|+|.|+|||+++ +..|
T Consensus 4 ~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~---~~-~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n 78 (415)
T PF00450_consen 4 DEPVPFKQYSGYLPVNDNENAHLFYWFFESRN---DP-EDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDN 78 (415)
T ss_dssp SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SS---GG-CSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-
T ss_pred CCCCCceEEEEEEecCCCCCcEEEEEEEEeCC---CC-CCccEEEEecCCceeccc-cccccccCceEEeeccccccccc
Confidence 3457899999999999 67899999999853 56 456999999999999999 7999999999987 5689
Q ss_pred ccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHH
Q 018274 101 NSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (358)
Q Consensus 101 ~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~ 180 (358)
++||++.+|||||||||||||||..++..+..+++++|+++++||+.||++||+++++|+||+||||||||||.+|.+|+
T Consensus 79 ~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 79 PYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred ccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 99999999999999999999999987666788999999999999999999999999999999999999999999999999
Q ss_pred HHHHhC-cceeeeeeeeccCccCChhhhhhhhhhhhhhcCCCChhhHHHHHHHHHHHHHHHHcCCccchHHHHHHHHHHH
Q 018274 181 KAIEAG-KLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVI 259 (358)
Q Consensus 181 ~~~~~~-~~~inlkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~~~~~~~~i~~~~~~~a~~~~~~~~~~i 259 (358)
+++.+. ..+||||||+|||||+||..|..++.++++.+|+|++++++.+.+.++.+ ..+......|......+
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~------~~~~~~~~~c~~~~~~~ 232 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEAC------PQCQKAITECAAALDEL 232 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTS------HSSSCCHHHHHHHHHHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhcc------ccccchhhHHHHHHHhh
Confidence 987543 35899999999999999999999999999999999998888766543221 12223344555444433
Q ss_pred H------hccCCccccccccccCCCcccchhhhhhhccchhhHHHhhhccCCCCCCCCchhhhhccHH-HHHHhCCC-CC
Q 018274 260 S------QNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNGV-IKKKLKII-PE 331 (358)
Q Consensus 260 ~------~~~~~vn~YdI~~~~~~~~~~~~~~~~~~~~~~~~y~~yl~~~~~~~p~~~~~l~~fLN~~-Vr~aL~i~-~~ 331 (358)
. ...+++|+|||+.+|+..... ........+|+....++.|||++ ||++||+. ..
T Consensus 233 ~~~~~~~~~~~~~n~Ydi~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~ 295 (415)
T PF00450_consen 233 SCQYAISQCNGGINPYDIRQPCYNPSRS-----------------SYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDS 295 (415)
T ss_dssp HHHCHHHHHHTTSETTSTTSEETT-SHC-----------------TTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTT
T ss_pred hhhcccccccCCcceeeeeccccccccc-----------------cccccccccccchhhHHHHhccHHHHHhhCCCccc
Confidence 3 245799999999998531100 00000113344678899999996 99999986 35
Q ss_pred CCccccccHHH-HHHhhhCcCCcCCC
Q 018274 332 NITWGGQSDSV-FTELSGDFMRPRIS 356 (358)
Q Consensus 332 ~~~W~~Cs~~V-~~~~~~D~m~p~~~ 356 (358)
..+|..||+.| +..+..|+++|++.
T Consensus 296 ~~~w~~~~~~V~~~~~~~d~~~~~~~ 321 (415)
T PF00450_consen 296 NVNWQSCNDAVNFNWLYDDFMPSSIP 321 (415)
T ss_dssp SSS--SB-HHHHHHCCTCCC-SBCHH
T ss_pred CCcccccCcccccccccccccccchh
Confidence 67999999999 77778899888764
No 3
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=3.4e-67 Score=529.47 Aligned_cols=288 Identities=22% Similarity=0.406 Sum_probs=246.0
Q ss_pred CCCCCcceeeEEEecC---CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCccc-----CccCc
Q 018274 30 KNQDASEEWGYVEVRP---KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY-----LKPRN 101 (358)
Q Consensus 30 ~~~~~~~~~Gy~~v~~---~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~-----~~~n~ 101 (358)
-+.++++++|||+|++ +.+||||||+++ ++|. ++||||||||||||||+ .|+|.|+|||+++ +..|+
T Consensus 41 ~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~---~~~~-~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~ 115 (462)
T PTZ00472 41 CDPSVNQWSGYFDIPGNQTDKHYFYWAFGPR---NGNP-EAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNT 115 (462)
T ss_pred cCCCCcceeEEEEeCCCCCCceEEEEEEEcC---CCCC-CCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECC
Confidence 3456889999999964 589999999984 3564 56999999999999999 8999999999986 45799
Q ss_pred cccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHH
Q 018274 102 STWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (358)
Q Consensus 102 ~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 181 (358)
+||++.+||||||||+||||||+... .+..+++++|+|+++||+.||++||+++++|+||+||||||+|+|.+|.+|++
T Consensus 116 ~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~ 194 (462)
T PTZ00472 116 YSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINM 194 (462)
T ss_pred cccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHh
Confidence 99999999999999999999998653 46778899999999999999999999999999999999999999999999998
Q ss_pred HHHhC-cceeeeeeeeccCccCChhhhhhhhhhhhhh-------cCCCChhhHHHHHHHHHHHHHHHHcCCcc-------
Q 018274 182 AIEAG-KLKLKLGGVALGDSWISPEDFVFSWGPLLKD-------MSRLDTNGFAKSNQIAQKIKQQLEAGEFV------- 246 (358)
Q Consensus 182 ~~~~~-~~~inlkGi~iGng~i~p~~q~~~~~~~~~~-------~gli~~~~~~~~~~~~~~~~~~i~~~~~~------- 246 (358)
+++.+ ..+||||||+|||||+||..|+.+|.+|++. .|+|++++++.+++..+.|++.++.|+..
T Consensus 195 ~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~ 274 (462)
T PTZ00472 195 GNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSS 274 (462)
T ss_pred hccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchH
Confidence 87654 3689999999999999999999999999985 58999999999999999999888887642
Q ss_pred --chHHHHHHHHHHHHhccCCccccccccccCCCcccchhhhhhhccchhhHHHhhhccCCCCCC-CCchhhhhccHH-H
Q 018274 247 --GATDSWAQLESVISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPD-GDGDVGSLMNGV-I 322 (358)
Q Consensus 247 --~a~~~~~~~~~~i~~~~~~vn~YdI~~~~~~~~~~~~~~~~~~~~~~~~y~~yl~~~~~~~p~-~~~~l~~fLN~~-V 322 (358)
.+...|+.++..+. .+++|+|||+.+|..+ +| ....+++|||++ |
T Consensus 275 c~~a~~~c~~~~~~~~--~~g~n~Ydi~~~c~~~-----------------------------~c~~~~~~~~yLN~~~V 323 (462)
T PTZ00472 275 CSVARALCNEYIAVYS--ATGLNNYDIRKPCIGP-----------------------------LCYNMDNTIAFMNREDV 323 (462)
T ss_pred HHHHHHHHHHHHHHHH--hcCCChhheeccCCCC-----------------------------CccCHHHHHHHhCCHHH
Confidence 23345665544332 4679999999876311 23 235688999996 9
Q ss_pred HHHhCCCCCCCccccccHHHHHHhhhCcCCcCCC
Q 018274 323 KKKLKIIPENITWGGQSDSVFTELSGDFMRPRIS 356 (358)
Q Consensus 323 r~aL~i~~~~~~W~~Cs~~V~~~~~~D~m~p~~~ 356 (358)
|+|||+. ..+|+.||+.|+.+|..|+|+|+..
T Consensus 324 q~AL~v~--~~~w~~c~~~V~~~~~~D~~~~~~~ 355 (462)
T PTZ00472 324 QSSLGVK--PATWQSCNMEVNLMFEMDWMKNFNY 355 (462)
T ss_pred HHHhCCC--CCCceeCCHHHHHHhhhccccchHH
Confidence 9999984 3689999999999999999998754
No 4
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=3.5e-67 Score=524.19 Aligned_cols=288 Identities=19% Similarity=0.313 Sum_probs=233.2
Q ss_pred CCCCCcceeeEEEecC--CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCccc----------C
Q 018274 30 KNQDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY----------L 97 (358)
Q Consensus 30 ~~~~~~~~~Gy~~v~~--~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~----------~ 97 (358)
.+.++++++||++|++ +.++|||||+++ ++|+ ++|+||||||||||||+ .|+|.|+|||+++ +
T Consensus 31 ~~~~~~~~sGy~~v~~~~~~~lfy~f~es~---~~~~-~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~~~~~~~~l 105 (433)
T PLN03016 31 GPLPFELETGYIGIGEDENVQFFYYFIKSE---NNPK-EDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEVFNGSAPSL 105 (433)
T ss_pred CCCCeeEEEEEEEecCCCCeEEEEEEEecC---CCcc-cCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccccCCCCCce
Confidence 3456899999999976 478999999974 3564 45999999999999999 7999999999863 4
Q ss_pred ccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHH
Q 018274 98 KPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (358)
Q Consensus 98 ~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~ 177 (358)
.+|++||++.+||||||||+||||||+.++... .++++.|++++.||+.||++||+|+++|+||+||||||||||.+|+
T Consensus 106 ~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~ 184 (433)
T PLN03016 106 FSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 184 (433)
T ss_pred eeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHH
Confidence 569999999999999999999999998755443 4555667999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-CcceeeeeeeeccCccCChhhhhhhhhhhhhhcCCCChhhHHHHHHHHHHHHHHHHcCCccchHHHHHHHH
Q 018274 178 AAVKAIEA-GKLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLE 256 (358)
Q Consensus 178 ~i~~~~~~-~~~~inlkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~~~~~~~~i~~~~~~~a~~~~~~~~ 256 (358)
+|++.+++ ...+||||||+||||++||..|..++.+|++.+|+|++++++.+++. |..... ....+...|..++
T Consensus 185 ~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~---c~~~~~--~~~~~~~~C~~~~ 259 (433)
T PLN03016 185 EISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRI---CNGNYY--NVDPSNTQCLKLT 259 (433)
T ss_pred HHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHH---hccccc--cCCCchHHHHHHH
Confidence 99987653 24579999999999999999999999999999999999988877654 221111 1224566798887
Q ss_pred HHHHhccCCccccccccccCCCcccchhhhhhhccchhhHHHhhhccCCCCCCC---CchhhhhccHH-HHHHhCCCCC-
Q 018274 257 SVISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDG---DGDVGSLMNGV-IKKKLKIIPE- 331 (358)
Q Consensus 257 ~~i~~~~~~vn~YdI~~~~~~~~~~~~~~~~~~~~~~~~y~~yl~~~~~~~p~~---~~~l~~fLN~~-Vr~aL~i~~~- 331 (358)
..+...++++|+|||+.++|.. .. . + .++|. ...+++|||++ ||+|||+.+.
T Consensus 260 ~~~~~~~~~~n~yni~~~~~~~-~~-----------~----------~-~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~ 316 (433)
T PLN03016 260 EEYHKCTAKINIHHILTPDCDV-TN-----------V----------T-SPDCYYYPYHLIECWANDESVREALHIEKGS 316 (433)
T ss_pred HHHHHHhcCCChhhccCCcccc-cc-----------c----------C-CCcccccchHHHHHHhCCHHHHHHhCCCCCC
Confidence 7777778899999999765521 10 0 0 12232 24678999996 9999999653
Q ss_pred CCccccccHHHHHHhhhCcCCc
Q 018274 332 NITWGGQSDSVFTELSGDFMRP 353 (358)
Q Consensus 332 ~~~W~~Cs~~V~~~~~~D~m~p 353 (358)
..+|..||+.|. +..|++.+
T Consensus 317 ~~~w~~cn~~v~--~~~d~~~~ 336 (433)
T PLN03016 317 KGKWARCNRTIP--YNHDIVSS 336 (433)
T ss_pred CCCCccCCcccc--cccccchh
Confidence 468999999997 66777643
No 5
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.2e-67 Score=485.27 Aligned_cols=318 Identities=51% Similarity=0.897 Sum_probs=284.7
Q ss_pred CcceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccc
Q 018274 34 ASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFV 113 (358)
Q Consensus 34 ~~~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~i 113 (358)
+.+.|||++|+..+|+|+|+|.+... .. ..+|+.|||+||||+||.|+|+|.|+||.++++++|+.+|.+.|+|+||
T Consensus 1 ~d~~wg~v~vr~~a~~F~wly~~~~~--~k-s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfv 77 (414)
T KOG1283|consen 1 GDEDWGYVDVRTGAHMFWWLYYATAN--VK-SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFV 77 (414)
T ss_pred CCccccceeeecCceEEEEEeeeccc--cc-cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEe
Confidence 35679999999999999999987532 22 4569999999999999999999999999999999999999999999999
Q ss_pred cCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeee
Q 018274 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (358)
Q Consensus 114 DqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlk 193 (358)
|+|||+||||.+..+.|.++++++|.|+...|+.||..||+|+.+||||+-|||||+..+.+|..+.+.++.++++.|+.
T Consensus 78 DnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~ 157 (414)
T KOG1283|consen 78 DNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFI 157 (414)
T ss_pred cCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecce
Confidence 99999999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccCccCChhhhhhhhhhhhhhcCCCChhhHHHHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHhccCCcccccccc
Q 018274 194 GVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNAVDFYNFLL 273 (358)
Q Consensus 194 Gi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~~~~~~~~i~~~~~~~a~~~~~~~~~~i~~~~~~vn~YdI~~ 273 (358)
||+||++||+|++.+.+|+|++++.+++|+++++.+++.+++|+..++++.|..|+.+|-.....+...+.++|+|||+.
T Consensus 158 ~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNil~ 237 (414)
T KOG1283|consen 158 GVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNILT 237 (414)
T ss_pred eEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeeeec
Confidence 99999999999999999999999999999999999999999999999999999999999888888888899999999999
Q ss_pred ccCCCcccchhhhhhhccchhhHHHhhhccCCCCCCCCchhhhhccHHHHHHhCCCCCCCccccccHHHHHHhhhCcCCc
Q 018274 274 DSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNGVIKKKLKIIPENITWGGQSDSVFTELSGDFMRP 353 (358)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~y~~yl~~~~~~~p~~~~~l~~fLN~~Vr~aL~i~~~~~~W~~Cs~~V~~~~~~D~m~p 353 (358)
+...++.+.+.+. ......+.+++.. +..-+.+.+.|+++||.+||++|+|+|+...|..++.+||.++..|||||
T Consensus 238 ~t~~d~~~~ss~~---~~~~~~~~rrl~~-~~~~~~~~D~L~~lM~g~vrkkLgIip~~~~wGgqsg~vFt~lq~dFMKP 313 (414)
T KOG1283|consen 238 KTLGDQYSLSSRA---AMTPEEVMRRLLV-RFVGDEDRDKLSDLMNGPVRKKLGIIPGGVKWGGQSGDVFTKLQGDFMKP 313 (414)
T ss_pred cCCCcchhhhhhh---hcchHHHHHHHHh-ccCcchhHHHHHHHhcccccccccccCCCCcccCcCCchHHHhhhhhccc
Confidence 9887776543321 1112223333321 12334456789999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 018274 354 RISEV 358 (358)
Q Consensus 354 ~~~~v 358 (358)
++.+|
T Consensus 314 vi~~V 318 (414)
T KOG1283|consen 314 VISKV 318 (414)
T ss_pred HHHHH
Confidence 98765
No 6
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.7e-64 Score=505.01 Aligned_cols=291 Identities=22% Similarity=0.326 Sum_probs=225.5
Q ss_pred CCCCCCcceeeEEEecC--CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCccc----------
Q 018274 29 NKNQDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY---------- 96 (358)
Q Consensus 29 ~~~~~~~~~~Gy~~v~~--~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~---------- 96 (358)
..+.++++++||++|++ +.++||||||++ ++|+ ++|+||||||||||||+ .|+|.|+|||+++
T Consensus 32 ~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~---~~~~-~~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~~~~~ 106 (437)
T PLN02209 32 KGPLPFELETGYIGIGEEENVQFFYYFIKSD---KNPQ-EDPLIIWLNGGPGCSCL-SGLFFENGPLALKNKVYNGSVPS 106 (437)
T ss_pred CCCCCeeEEEEEEEecCCCCeEEEEEEEecC---CCCC-CCCEEEEECCCCcHHHh-hhHHHhcCCceeccCCCCCCccc
Confidence 34567889999999976 478999999974 3564 45999999999999999 7999999999974
Q ss_pred CccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhH
Q 018274 97 LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (358)
Q Consensus 97 ~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a 176 (358)
+.+|++||++.+||||||||+||||||..++... .++++.|+|+++||+.||++||+|+++|+||+||||||||||.+|
T Consensus 107 l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a 185 (437)
T PLN02209 107 LVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALV 185 (437)
T ss_pred ceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHH
Confidence 4469999999999999999999999998755444 445567799999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-CcceeeeeeeeccCccCChhhhhhhhhhhhhhcCCCChhhHHHHHHHHHHHHHHHHcCCccchHHHHHHH
Q 018274 177 LAAVKAIEA-GKLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQL 255 (358)
Q Consensus 177 ~~i~~~~~~-~~~~inlkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~~~~~~~~i~~~~~~~a~~~~~~~ 255 (358)
++|++.+++ .+.+||||||+|||||+||..|..++.+|++.+|+|++++++.+++. |.... -.+......|..+
T Consensus 186 ~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~---c~~~~--~~~~~~~~~C~~~ 260 (437)
T PLN02209 186 HEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRI---CKGNY--FSVDPSNKKCLKL 260 (437)
T ss_pred HHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHh---ccccc--ccCCCChHHHHHH
Confidence 999887643 34579999999999999999999999999999999999998877664 22100 0011223457666
Q ss_pred HHHHHhccCCccccccccccCCCcccchhhhhhhccchhhHHHhhhccCCCCCCC---CchhhhhccHH-HHHHhCCCCC
Q 018274 256 ESVISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDG---DGDVGSLMNGV-IKKKLKIIPE 331 (358)
Q Consensus 256 ~~~i~~~~~~vn~YdI~~~~~~~~~~~~~~~~~~~~~~~~y~~yl~~~~~~~p~~---~~~l~~fLN~~-Vr~aL~i~~~ 331 (358)
+.........+|.|++..+.|..... +.. ..+|. ...++.|||++ ||++||+...
T Consensus 261 i~~~~~~~~~~~~~~~~~~~c~~~~~-----------------~~~----~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~ 319 (437)
T PLN02209 261 VEEYHKCTDNINSHHTLIANCDDSNT-----------------QHI----SPDCYYYPYHLVECWANNESVREALHVDKG 319 (437)
T ss_pred HHHHHHHhhcCCcccccccccccccc-----------------ccC----CCCcccccHHHHHHHhCCHHHHHHhCCCCC
Confidence 55555556678888765433321100 000 12342 24688999996 9999998532
Q ss_pred -CCccccccHHHHHHhhhCcCCc
Q 018274 332 -NITWGGQSDSVFTELSGDFMRP 353 (358)
Q Consensus 332 -~~~W~~Cs~~V~~~~~~D~m~p 353 (358)
...|..|+..+ .+..|.|++
T Consensus 320 ~~~~w~~~~~~~--~~~~d~~~~ 340 (437)
T PLN02209 320 SIGEWIRDHRGI--PYKSDIRSS 340 (437)
T ss_pred CCCCCccccchh--hcccchhhh
Confidence 24699998755 466777754
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-51 Score=401.24 Aligned_cols=291 Identities=22% Similarity=0.394 Sum_probs=219.2
Q ss_pred CcceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCc------cCccccccc
Q 018274 34 ASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLK------PRNSTWLKK 107 (358)
Q Consensus 34 ~~~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~------~n~~sw~~~ 107 (358)
..+++||.+. +..+|||.|+++ ++| .++|+|+||||||||||+ .|+|.|+||.+|+.. .||+||+++
T Consensus 74 v~~~~g~~d~--ed~~ffy~fe~~---ndp-~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~ 146 (498)
T COG2939 74 VRDYTGYPDA--EDFFFFYTFESP---NDP-ANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDF 146 (498)
T ss_pred hhhccCCccc--ceeEEEEEecCC---CCC-CCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccC
Confidence 4455566332 234899999863 355 456999999999999999 799999999998643 499999999
Q ss_pred cccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCC--CEEEEecccccchhhhhHHHHHHHHHh
Q 018274 108 ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKS--PLFIVAESYGGKFAATLGLAAVKAIEA 185 (358)
Q Consensus 108 ~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~--~~~i~GeSYgG~yvp~~a~~i~~~~~~ 185 (358)
+||||||||+|||||++. .+....+...+.+|+..|++.||+.||++.+. |+||+||||||+|+|.||++|++++..
T Consensus 147 adLvFiDqPvGTGfS~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~ 225 (498)
T COG2939 147 ADLVFIDQPVGTGFSRAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA 225 (498)
T ss_pred CceEEEecCcccCccccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc
Confidence 999999999999999983 34567889999999999999999999999877 999999999999999999999998654
Q ss_pred CcceeeeeeeeccCc-cCChhhhhhhhhhhhhhcC----CCChhhHHHHHH--HHHHHHHHHHcCCccchHHHHHHHHHH
Q 018274 186 GKLKLKLGGVALGDS-WISPEDFVFSWGPLLKDMS----RLDTNGFAKSNQ--IAQKIKQQLEAGEFVGATDSWAQLESV 258 (358)
Q Consensus 186 ~~~~inlkGi~iGng-~i~p~~q~~~~~~~~~~~g----li~~~~~~~~~~--~~~~~~~~i~~~~~~~a~~~~~~~~~~ 258 (358)
.+-.+||++++|||| ||||..|+..|.+++...+ .++.+.++++++ ....|..++..|.-..+...|......
T Consensus 226 ~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~ 305 (498)
T COG2939 226 LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAY 305 (498)
T ss_pred cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHH
Confidence 455799999999999 9999999999999998654 444455555555 233445445444322233445433322
Q ss_pred HHh-------ccC--CccccccccccCCCcccchhhhhhhccchhhHHHhhhccCCCCCCCCchhhhhccH-HHHHHhCC
Q 018274 259 ISQ-------NSN--AVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKI 328 (358)
Q Consensus 259 i~~-------~~~--~vn~YdI~~~~~~~~~~~~~~~~~~~~~~~~y~~yl~~~~~~~p~~~~~l~~fLN~-~Vr~aL~i 328 (358)
+.. ..+ ..|+||++..|.. +.+. ..+|. ....+.+|+|. ++++.++.
T Consensus 306 ~~~~~~~~~~r~~~~~~n~y~~r~~~~d-~g~~----------~~~y~------------~~~~~ld~~~~~~~~~~~~~ 362 (498)
T COG2939 306 LTGLMREYVGRAGGRLLNVYDIREECRD-PGLG----------GSCYD------------TLSTSLDYFNFDPEQEVNDP 362 (498)
T ss_pred HHhcchhhhccccccccccccchhhcCC-CCcc----------ccccc------------ceeeccccccccchhccccc
Confidence 221 122 4899999988753 3321 12222 23456677775 68888753
Q ss_pred CCCCCccccccHHHHHHh---hhCcCCcCCCC
Q 018274 329 IPENITWGGQSDSVFTEL---SGDFMRPRISE 357 (358)
Q Consensus 329 ~~~~~~W~~Cs~~V~~~~---~~D~m~p~~~~ 357 (358)
....|..|+.+|..+| ..+++++....
T Consensus 363 --~~d~~~~c~t~a~~~f~~~~~~~~~~~~~~ 392 (498)
T COG2939 363 --EVDNISGCTTDAMTDFLTFTGGWAKPSRYL 392 (498)
T ss_pred --cccchhccchHHHHhhhhhcCCcccccHHH
Confidence 4567999999999999 58999887654
No 8
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.4e-44 Score=349.62 Aligned_cols=215 Identities=15% Similarity=0.214 Sum_probs=169.5
Q ss_pred ccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHh-
Q 018274 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA- 185 (358)
Q Consensus 107 ~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~- 185 (358)
.|||||||||+||||||+.++... .+++++|+|++.||+.||++||+|+++||||+||||||||||.||++|++.+.+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 379999999999999998755443 455666699999999999999999999999999999999999999999987653
Q ss_pred CcceeeeeeeeccCccCChhhhhhhhhhhhhhcCCCChhhHHHHHHHHHHHHHHHHcCCccchHHHHHHHHHHHHhccCC
Q 018274 186 GKLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNA 265 (358)
Q Consensus 186 ~~~~inlkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~~~~~~~~~~~~~~~~i~~~~~~~a~~~~~~~~~~i~~~~~~ 265 (358)
...+||||||+|||||++|..|..++.+|++.+|+|++++++.+++. |..... ....+...|..++..+....+.
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~---c~~~~~--~~~~~~~~c~~~~~~~~~~~~~ 154 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRI---CNGNYY--NVDPSNTQCLKLTEEYHKCTAK 154 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHh---cCCCcc--CCCCCcHHHHHHHHHHHHHHhc
Confidence 34579999999999999999999999999999999999998877653 211110 1223456788877777777788
Q ss_pred ccccccccccCCCcccchhhhhhhccchhhHHHhhhccCCCCCCC---CchhhhhccHH-HHHHhCCCCC-CCccccccH
Q 018274 266 VDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDG---DGDVGSLMNGV-IKKKLKIIPE-NITWGGQSD 340 (358)
Q Consensus 266 vn~YdI~~~~~~~~~~~~~~~~~~~~~~~~y~~yl~~~~~~~p~~---~~~l~~fLN~~-Vr~aL~i~~~-~~~W~~Cs~ 340 (358)
+|+||++.++|... . . + .++|. ...+++|||++ ||+|||+.+. ..+|+.||+
T Consensus 155 ~~~~~~~~~~~~~~-~-----------~----------~-~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~ 211 (319)
T PLN02213 155 INIHHILTPDCDVT-N-----------V----------T-SPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNR 211 (319)
T ss_pred CCHhhcccCcccCc-c-----------C----------C-CCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCc
Confidence 99999986654211 0 0 0 12332 24689999996 9999999643 468999999
Q ss_pred HHHHHhhhCcCC
Q 018274 341 SVFTELSGDFMR 352 (358)
Q Consensus 341 ~V~~~~~~D~m~ 352 (358)
.|. +..|++.
T Consensus 212 ~v~--~~~d~~~ 221 (319)
T PLN02213 212 TIP--YNHDIVS 221 (319)
T ss_pred ccc--ccccccc
Confidence 997 6677764
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.69 E-value=5.4e-08 Score=89.69 Aligned_cols=108 Identities=24% Similarity=0.333 Sum_probs=73.0
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccc-cccccccccCCcccccccccCCCCcccchHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~-~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl 145 (358)
.|.||++|||||++......+.+ ... +.++++.+|.| |.|.|..........+.++.++++..++
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~-------------~l~~~g~~vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 90 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRE-------------LLKEEGREVIMYDQL-GCGYSDQPDDSDELWTIDYFVDELEEVR 90 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHH-------------HHHhcCCEEEEEcCC-CCCCCCCCCcccccccHHHHHHHHHHHH
Confidence 37899999999998653222211 111 25899999999 9999874322111245677777776666
Q ss_pred HHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 146 ~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
+. +..++++|+|+|+||..+..+|..- +..++++++.++...+
T Consensus 91 ~~-------~~~~~~~liG~S~Gg~ia~~~a~~~---------p~~v~~lvl~~~~~~~ 133 (288)
T TIGR01250 91 EK-------LGLDKFYLLGHSWGGMLAQEYALKY---------GQHLKGLIISSMLDSA 133 (288)
T ss_pred HH-------cCCCcEEEEEeehHHHHHHHHHHhC---------ccccceeeEecccccc
Confidence 53 3345799999999999888777532 2357899988776543
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.64 E-value=7.4e-08 Score=87.54 Aligned_cols=106 Identities=22% Similarity=0.246 Sum_probs=75.0
Q ss_pred CCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHH
Q 018274 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl 145 (358)
+.|+||++||.+|.+..+ ..+. .-+.+.++++-+|.| |.|.|..... ...+.++.++++.+++
T Consensus 12 ~~~~iv~lhG~~~~~~~~-~~~~-------------~~l~~~~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~~~~~~~i 74 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYW-APQL-------------DVLTQRFHVVTYDHR-GTGRSPGELP--PGYSIAHMADDVLQLL 74 (257)
T ss_pred CCCEEEEEcCCCcchhHH-HHHH-------------HHHHhccEEEEEcCC-CCCCCCCCCc--ccCCHHHHHHHHHHHH
Confidence 358999999998877663 2221 123446899999999 9999965322 2336677788888777
Q ss_pred HHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 146 ~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
+. ....+++|+|+|+||..+..+|....+ .++++++-+++..+
T Consensus 75 ~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~---------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 75 DA-------LNIERFHFVGHALGGLIGLQLALRYPE---------RLLSLVLINAWSRP 117 (257)
T ss_pred HH-------hCCCcEEEEEechhHHHHHHHHHHChH---------HhHHheeecCCCCC
Confidence 63 234579999999999988888764322 47788877776654
No 11
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.51 E-value=4.2e-07 Score=87.14 Aligned_cols=125 Identities=18% Similarity=0.308 Sum_probs=80.9
Q ss_pred eeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccc-ccccccccccCC
Q 018274 38 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNP 116 (358)
Q Consensus 38 ~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw-~~~~~~l~iDqP 116 (358)
.+|+.+.++..++|+-+. .+ +. |.||++||+||.++. .... ..| .+.++++.+|.|
T Consensus 6 ~~~~~~~~~~~l~y~~~g------~~-~~-~~lvllHG~~~~~~~-~~~~--------------~~~~~~~~~vi~~D~~ 62 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSG------NP-DG-KPVVFLHGGPGSGTD-PGCR--------------RFFDPETYRIVLFDQR 62 (306)
T ss_pred CCeEEcCCCcEEEEEECc------CC-CC-CEEEEECCCCCCCCC-HHHH--------------hccCccCCEEEEECCC
Confidence 579998877778765431 22 22 457999999988654 1111 112 146899999999
Q ss_pred cccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeee
Q 018274 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA 196 (358)
Q Consensus 117 vG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~ 196 (358)
|.|.|..... ....+.++.++++..+++. +...+++++|+||||..+-.+|.+-.+ .+++++
T Consensus 63 -G~G~S~~~~~-~~~~~~~~~~~dl~~l~~~-------l~~~~~~lvG~S~GG~ia~~~a~~~p~---------~v~~lv 124 (306)
T TIGR01249 63 -GCGKSTPHAC-LEENTTWDLVADIEKLREK-------LGIKNWLVFGGSWGSTLALAYAQTHPE---------VVTGLV 124 (306)
T ss_pred -CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEECHHHHHHHHHHHHChH---------hhhhhe
Confidence 9999974321 1233456677776665543 234579999999999877776654322 467777
Q ss_pred ccCccCC
Q 018274 197 LGDSWIS 203 (358)
Q Consensus 197 iGng~i~ 203 (358)
+-+..+.
T Consensus 125 l~~~~~~ 131 (306)
T TIGR01249 125 LRGIFLL 131 (306)
T ss_pred eeccccC
Confidence 7666543
No 12
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.46 E-value=3.1e-07 Score=80.94 Aligned_cols=104 Identities=22% Similarity=0.224 Sum_probs=75.5
Q ss_pred EEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHH
Q 018274 70 ILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELF 149 (358)
Q Consensus 70 ilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~ 149 (358)
||++||++|.+.. +..+. ..+.+.++++.+|.| |.|.|..... ....+.++.++++.++++.
T Consensus 1 vv~~hG~~~~~~~-~~~~~-------------~~l~~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~-- 62 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLA-------------EALARGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAEDLAELLDA-- 62 (228)
T ss_dssp EEEE-STTTTGGG-GHHHH-------------HHHHTTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHHHHHHHHH--
T ss_pred eEEECCCCCCHHH-HHHHH-------------HHHhCCCEEEEEecC-Cccccccccc-cCCcchhhhhhhhhhcccc--
Confidence 7899999999876 33332 122368899999999 9999976432 2345677788888888874
Q ss_pred hhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 150 NKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 150 ~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
...++++|+|+|+||..+-.++.+. +-.++|+++-++.....
T Consensus 63 -----~~~~~~~lvG~S~Gg~~a~~~a~~~---------p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 63 -----LGIKKVILVGHSMGGMIALRLAARY---------PDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp -----TTTSSEEEEEETHHHHHHHHHHHHS---------GGGEEEEEEESESSSHH
T ss_pred -----ccccccccccccccccccccccccc---------ccccccceeeccccccc
Confidence 2236899999999999887776542 12789999988887643
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.44 E-value=4e-07 Score=86.30 Aligned_cols=104 Identities=18% Similarity=0.212 Sum_probs=76.0
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCC----CcccchHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNS----SFVKNDVEAANDLTT 143 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~----~~~~~~~~~a~~~~~ 143 (358)
|.||+|||.++.+.++ ..+. ..+.+.++++.+|.| |.|.|...+.. ....+.++.++++..
T Consensus 30 ~~vlllHG~~~~~~~w-~~~~-------------~~L~~~~~vi~~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~ 94 (294)
T PLN02824 30 PALVLVHGFGGNADHW-RKNT-------------PVLAKSHRVYAIDLL-GYGYSDKPNPRSAPPNSFYTFETWGEQLND 94 (294)
T ss_pred CeEEEECCCCCChhHH-HHHH-------------HHHHhCCeEEEEcCC-CCCCCCCCccccccccccCCHHHHHHHHHH
Confidence 7899999999998874 3332 134566799999999 99999754321 123467788888888
Q ss_pred HHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccC
Q 018274 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (358)
Q Consensus 144 fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i 202 (358)
+|+.. ...+++|+|+|+||..+-.+|.+-. -.++++++-|+..
T Consensus 95 ~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p---------~~v~~lili~~~~ 137 (294)
T PLN02824 95 FCSDV-------VGDPAFVICNSVGGVVGLQAAVDAP---------ELVRGVMLINISL 137 (294)
T ss_pred HHHHh-------cCCCeEEEEeCHHHHHHHHHHHhCh---------hheeEEEEECCCc
Confidence 88743 3468999999999998877765432 2588999877654
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=98.42 E-value=1.3e-06 Score=81.91 Aligned_cols=127 Identities=13% Similarity=0.173 Sum_probs=83.5
Q ss_pred cCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccc-ccccccccCCcccccc
Q 018274 44 RPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYS 122 (358)
Q Consensus 44 ~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~-~~~~l~iDqPvG~GfS 122 (358)
.++..+++..|+.. + ..+|+||.+||.++++.. +-.+. ..+.+ ..+++.+|.| |.|.|
T Consensus 8 ~~g~~l~~~~~~~~----~--~~~~~v~llHG~~~~~~~-~~~~~-------------~~l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 8 LDNDYIYCKYWKPI----T--YPKALVFISHGAGEHSGR-YEELA-------------ENISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCCEEEEEeccCC----C--CCCEEEEEeCCCccccch-HHHHH-------------HHHHhCCCEEEEccCC-CCCCC
Confidence 34567888777641 1 224899999999777765 32221 23444 4789999999 99999
Q ss_pred cccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccC
Q 018274 123 YVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (358)
Q Consensus 123 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i 202 (358)
.... ....+-.+..+|+..++..+-+. +...|++|+|+|+||..+..+|.+- +-.++|+++.+|.+
T Consensus 67 ~~~~--~~~~~~~~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~~---------p~~i~~lil~~p~~ 132 (276)
T PHA02857 67 NGEK--MMIDDFGVYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYKN---------PNLFTAMILMSPLV 132 (276)
T ss_pred CCcc--CCcCCHHHHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHhC---------ccccceEEEecccc
Confidence 6421 12334455667777777654333 3357899999999998665555321 22589999998877
Q ss_pred Chh
Q 018274 203 SPE 205 (358)
Q Consensus 203 ~p~ 205 (358)
.+.
T Consensus 133 ~~~ 135 (276)
T PHA02857 133 NAE 135 (276)
T ss_pred ccc
Confidence 643
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.40 E-value=6.1e-07 Score=82.52 Aligned_cols=99 Identities=24% Similarity=0.244 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHH
Q 018274 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl 145 (358)
++|.||++||.+|.+.. ...+. ..+.+.++++.+|.| |.|.|.... ..+.++.++|+..++
T Consensus 15 ~~~~iv~lhG~~~~~~~-~~~~~-------------~~l~~~~~vi~~D~~-G~G~s~~~~----~~~~~~~~~d~~~~l 75 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDN-LGVLA-------------RDLVNDHDIIQVDMR-NHGLSPRDP----VMNYPAMAQDLLDTL 75 (255)
T ss_pred CCCCEEEECCCCCchhH-HHHHH-------------HHHhhCCeEEEECCC-CCCCCCCCC----CCCHHHHHHHHHHHH
Confidence 45899999999998876 33332 124467899999999 999986432 236677888999888
Q ss_pred HHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccC
Q 018274 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD 199 (358)
Q Consensus 146 ~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGn 199 (358)
..+ ...+++|+|+|+||..+..+|.+..+ .++++++.+
T Consensus 76 ~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~---------~v~~lvli~ 113 (255)
T PRK10673 76 DAL-------QIEKATFIGHSMGGKAVMALTALAPD---------RIDKLVAID 113 (255)
T ss_pred HHc-------CCCceEEEEECHHHHHHHHHHHhCHh---------hcceEEEEe
Confidence 752 34579999999999988877765322 477888755
No 16
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.40 E-value=1.8e-06 Score=83.39 Aligned_cols=139 Identities=17% Similarity=0.157 Sum_probs=89.0
Q ss_pred cceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccc-ccccccc
Q 018274 35 SEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFV 113 (358)
Q Consensus 35 ~~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~-~~~~l~i 113 (358)
....++++..++..++|+.+.... .. ..+|+||++||..+.++..+-.+ ...+.+ .++|+.+
T Consensus 31 ~~~~~~~~~~dg~~l~~~~~~~~~--~~--~~~~~VvllHG~~~~~~~~~~~~-------------~~~L~~~Gy~V~~~ 93 (330)
T PLN02298 31 KGSKSFFTSPRGLSLFTRSWLPSS--SS--PPRALIFMVHGYGNDISWTFQST-------------AIFLAQMGFACFAL 93 (330)
T ss_pred ccccceEEcCCCCEEEEEEEecCC--CC--CCceEEEEEcCCCCCcceehhHH-------------HHHHHhCCCEEEEe
Confidence 345677777677788887664211 11 23589999999854332111000 112444 5899999
Q ss_pred cCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeee
Q 018274 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (358)
Q Consensus 114 DqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlk 193 (358)
|+| |.|.|... .....+.+..++|+..+++..-. ...+...+++|+|+|+||..+..++..- +-.++
T Consensus 94 D~r-GhG~S~~~--~~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~~---------p~~v~ 160 (330)
T PLN02298 94 DLE-GHGRSEGL--RAYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLAN---------PEGFD 160 (330)
T ss_pred cCC-CCCCCCCc--cccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhcC---------cccce
Confidence 999 99998532 22344677888999888875433 2233355899999999998765544321 22589
Q ss_pred eeeccCccCC
Q 018274 194 GVALGDSWIS 203 (358)
Q Consensus 194 Gi~iGng~i~ 203 (358)
|+++.+++.+
T Consensus 161 ~lvl~~~~~~ 170 (330)
T PLN02298 161 GAVLVAPMCK 170 (330)
T ss_pred eEEEeccccc
Confidence 9999887654
No 17
>PRK06489 hypothetical protein; Provisional
Probab=98.39 E-value=2.8e-06 Score=83.45 Aligned_cols=113 Identities=20% Similarity=0.122 Sum_probs=65.8
Q ss_pred CCEEEEEcCCCChhhhhh-hhhcccCCCcccC-ccCccccccccccccccCCcccccccccCCCC----cccchHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGI-GNFEEVGPFDTYL-KPRNSTWLKKADLLFVDNPVGTGYSYVEDNSS----FVKNDVEAAND 140 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~-g~~~e~GP~~~~~-~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~----~~~~~~~~a~~ 140 (358)
.|.||++||++|.+..+. ..+.+ .+ .....-..+.++++.+|.| |.|.|....... ...+.++.+++
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~------~l~~~~~~l~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~ 141 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAG------ELFGPGQPLDASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEA 141 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHH------HhcCCCCcccccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHH
Confidence 488999999998765521 01100 00 0000111356899999999 999996422110 01345666666
Q ss_pred HHHHHHHHHhhCcccCCCCE-EEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 141 LTTLLMELFNKNEILQKSPL-FIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 141 ~~~fl~~f~~~~p~~~~~~~-~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
+..++.. ++.-.++ +|+|+|+||..+-.+|.+-.+ .++++++-++.
T Consensus 142 ~~~~l~~------~lgi~~~~~lvG~SmGG~vAl~~A~~~P~---------~V~~LVLi~s~ 188 (360)
T PRK06489 142 QYRLVTE------GLGVKHLRLILGTSMGGMHAWMWGEKYPD---------FMDALMPMASQ 188 (360)
T ss_pred HHHHHHH------hcCCCceeEEEEECHHHHHHHHHHHhCch---------hhheeeeeccC
Confidence 6665432 2223456 489999999877776654322 46777765543
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.38 E-value=2.7e-06 Score=83.16 Aligned_cols=133 Identities=15% Similarity=0.187 Sum_probs=84.0
Q ss_pred eEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccc-ccccccccCCc
Q 018274 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPV 117 (358)
Q Consensus 39 Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~-~~~~l~iDqPv 117 (358)
.|..-..+..+|+..+... +. +.+|+||++||..+.++...-.+. ..+.+ .++++-+|.|
T Consensus 64 ~~~~~~~g~~l~~~~~~p~---~~--~~~~~iv~lHG~~~~~~~~~~~~~-------------~~l~~~g~~v~~~D~~- 124 (349)
T PLN02385 64 SYEVNSRGVEIFSKSWLPE---NS--RPKAAVCFCHGYGDTCTFFFEGIA-------------RKIASSGYGVFAMDYP- 124 (349)
T ss_pred eeEEcCCCCEEEEEEEecC---CC--CCCeEEEEECCCCCccchHHHHHH-------------HHHHhCCCEEEEecCC-
Confidence 3433334456776655421 11 235899999998766543111111 13443 5899999999
Q ss_pred ccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeec
Q 018274 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (358)
Q Consensus 118 G~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~i 197 (358)
|.|.|.... .+..+.++.++|+..+++. +...+++...+++|+|+|+||..+-.+|.+- +-.++|+++
T Consensus 125 G~G~S~~~~--~~~~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~~---------p~~v~glVL 192 (349)
T PLN02385 125 GFGLSEGLH--GYIPSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ---------PNAWDGAIL 192 (349)
T ss_pred CCCCCCCCC--CCcCCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHhC---------cchhhheeE
Confidence 999996432 2344667788888888765 3334455566899999999998766555431 225788888
Q ss_pred cCccC
Q 018274 198 GDSWI 202 (358)
Q Consensus 198 Gng~i 202 (358)
-++..
T Consensus 193 i~p~~ 197 (349)
T PLN02385 193 VAPMC 197 (349)
T ss_pred ecccc
Confidence 77654
No 19
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.35 E-value=2.3e-06 Score=79.29 Aligned_cols=105 Identities=21% Similarity=0.228 Sum_probs=73.2
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
.|.||++||.+|.+.. +..+. ..+.+.++++.+|.| |.|.|..... ...+.+..++++.++++
T Consensus 28 ~~~vv~~hG~~~~~~~-~~~~~-------------~~l~~~~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~~~l~~~i~ 90 (278)
T TIGR03056 28 GPLLLLLHGTGASTHS-WRDLM-------------PPLARSFRVVAPDLP-GHGFTRAPFR--FRFTLPSMAEDLSALCA 90 (278)
T ss_pred CCeEEEEcCCCCCHHH-HHHHH-------------HHHhhCcEEEeecCC-CCCCCCCccc--cCCCHHHHHHHHHHHHH
Confidence 4899999999887766 32222 112345899999999 9999865322 23467788888888776
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
. +..++++|+|+|+||..+..+|... +-.++++++.++..++
T Consensus 91 ~-------~~~~~~~lvG~S~Gg~~a~~~a~~~---------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 91 A-------EGLSPDGVIGHSAGAAIALRLALDG---------PVTPRMVVGINAALMP 132 (278)
T ss_pred H-------cCCCCceEEEECccHHHHHHHHHhC---------CcccceEEEEcCcccc
Confidence 3 2346789999999998776665432 2357888888776553
No 20
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.33 E-value=3.6e-06 Score=80.25 Aligned_cols=129 Identities=16% Similarity=0.117 Sum_probs=82.3
Q ss_pred CCcceeeEEEecCC----ceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccc-cc
Q 018274 33 DASEEWGYVEVRPK----AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KK 107 (358)
Q Consensus 33 ~~~~~~Gy~~v~~~----~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~-~~ 107 (358)
++...-.|+++.+. .+++|.-. .++ +.|.||++||.|+.+..+ ..+. .-.. +.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~y~~~------G~~--~~~~lvliHG~~~~~~~w-~~~~-------------~~L~~~g 73 (302)
T PRK00870 16 DYPFAPHYVDVDDGDGGPLRMHYVDE------GPA--DGPPVLLLHGEPSWSYLY-RKMI-------------PILAAAG 73 (302)
T ss_pred CCCCCceeEeecCCCCceEEEEEEec------CCC--CCCEEEEECCCCCchhhH-HHHH-------------HHHHhCC
Confidence 33334478998762 35554421 233 237899999998877763 2221 1122 35
Q ss_pred cccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCc
Q 018274 108 ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGK 187 (358)
Q Consensus 108 ~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~ 187 (358)
++++.+|.| |.|.|..... ....+.++.++++.++|+. ....+++|+|||+||..+-.+|..-.
T Consensus 74 y~vi~~Dl~-G~G~S~~~~~-~~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~p------- 137 (302)
T PRK00870 74 HRVIAPDLI-GFGRSDKPTR-REDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIGLRLAAEHP------- 137 (302)
T ss_pred CEEEEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHHHHHHHhCh-------
Confidence 899999999 9999953211 1123566777777777653 33468999999999998877775422
Q ss_pred ceeeeeeeeccCcc
Q 018274 188 LKLKLGGVALGDSW 201 (358)
Q Consensus 188 ~~inlkGi~iGng~ 201 (358)
-.++++++-++.
T Consensus 138 --~~v~~lvl~~~~ 149 (302)
T PRK00870 138 --DRFARLVVANTG 149 (302)
T ss_pred --hheeEEEEeCCC
Confidence 247888876653
No 21
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.26 E-value=2.1e-06 Score=78.40 Aligned_cols=100 Identities=21% Similarity=0.269 Sum_probs=70.5
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
.|.||++||.||.+..+ ..+. . .. +.++++.+|.| |.|.|.... ..+.++.++++.++|+
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~-----------~--~l-~~~~vi~~D~~-G~G~S~~~~----~~~~~~~~~~l~~~l~ 61 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVG-----------E--AL-PDYPRLYIDLP-GHGGSAAIS----VDGFADVSRLLSQTLQ 61 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHH-----------H--Hc-CCCCEEEecCC-CCCCCCCcc----ccCHHHHHHHHHHHHH
Confidence 37899999999988763 2221 1 12 35899999999 999996422 2366777887777776
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
. +...+++++|+|+||..+-.+|.+... -.+++++|.++.
T Consensus 62 ~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~--------~~v~~lvl~~~~ 101 (242)
T PRK11126 62 S-------YNILPYWLVGYSLGGRIAMYYACQGLA--------GGLCGLIVEGGN 101 (242)
T ss_pred H-------cCCCCeEEEEECHHHHHHHHHHHhCCc--------ccccEEEEeCCC
Confidence 3 345689999999999887776654211 127788886654
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.25 E-value=2.7e-06 Score=80.70 Aligned_cols=103 Identities=19% Similarity=0.196 Sum_probs=74.8
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~ 147 (358)
|.||++||.|+.+..+ ..+. ..+.+..+++-+|.| |.|.|..... ..+.++.++|+..+++.
T Consensus 28 ~~vvllHG~~~~~~~w-~~~~-------------~~L~~~~~via~D~~-G~G~S~~~~~---~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 28 DPIVFLHGNPTSSYLW-RNII-------------PHLAGLGRCLAPDLI-GMGASDKPDI---DYTFADHARYLDAWFDA 89 (295)
T ss_pred CEEEEECCCCCCHHHH-HHHH-------------HHHhhCCEEEEEcCC-CCCCCCCCCC---CCCHHHHHHHHHHHHHH
Confidence 7899999999888774 2221 234556699999999 9999964322 23567788888777764
Q ss_pred HHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 148 f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
....+++|+|+|+||.++-.+|.+-. -.++++++.|+...|
T Consensus 90 -------l~~~~~~lvGhS~Gg~ia~~~a~~~p---------~~v~~lil~~~~~~~ 130 (295)
T PRK03592 90 -------LGLDDVVLVGHDWGSALGFDWAARHP---------DRVRGIAFMEAIVRP 130 (295)
T ss_pred -------hCCCCeEEEEECHHHHHHHHHHHhCh---------hheeEEEEECCCCCC
Confidence 33468999999999988777665432 258999998875544
No 23
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.18 E-value=1.2e-05 Score=80.42 Aligned_cols=133 Identities=17% Similarity=0.165 Sum_probs=87.1
Q ss_pred eEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccc-cccccccccCCc
Q 018274 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPV 117 (358)
Q Consensus 39 Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~-~~~~~l~iDqPv 117 (358)
..+.......+|++.+.... . +.+|+||++||.++.+.. +-.+. ..+. +.++++-+|.|
T Consensus 113 ~~~~~~~~~~l~~~~~~p~~----~-~~~~~Vl~lHG~~~~~~~-~~~~a-------------~~L~~~Gy~V~~~D~r- 172 (395)
T PLN02652 113 SLFYGARRNALFCRSWAPAA----G-EMRGILIIIHGLNEHSGR-YLHFA-------------KQLTSCGFGVYAMDWI- 172 (395)
T ss_pred EEEECCCCCEEEEEEecCCC----C-CCceEEEEECCchHHHHH-HHHHH-------------HHHHHCCCEEEEeCCC-
Confidence 33333334678877775421 1 235899999999877654 22221 1232 35789999999
Q ss_pred ccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeec
Q 018274 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (358)
Q Consensus 118 G~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~i 197 (358)
|.|.|-.. ..+..+.+..++|+..+++..-..+| ..+++|+|+|+||..+..++.+ .+..-.++|+++
T Consensus 173 GhG~S~~~--~~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~~-------p~~~~~v~glVL 240 (395)
T PLN02652 173 GHGGSDGL--HGYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAASY-------PSIEDKLEGIVL 240 (395)
T ss_pred CCCCCCCC--CCCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHhc-------cCcccccceEEE
Confidence 99998643 23455677788888888887665555 3589999999999876543321 111225899999
Q ss_pred cCccCC
Q 018274 198 GDSWIS 203 (358)
Q Consensus 198 Gng~i~ 203 (358)
.++++.
T Consensus 241 ~sP~l~ 246 (395)
T PLN02652 241 TSPALR 246 (395)
T ss_pred ECcccc
Confidence 888764
No 24
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.15 E-value=6.3e-06 Score=78.35 Aligned_cols=122 Identities=18% Similarity=0.254 Sum_probs=75.8
Q ss_pred eeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCC
Q 018274 37 EWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNP 116 (358)
Q Consensus 37 ~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqP 116 (358)
.+.++++++ ..++|. .. . + .|.||++||.|..+..+ -.+. ..+.+.++++-+|.|
T Consensus 15 ~~~~~~~~~-~~i~y~--~~----G---~-~~~iv~lHG~~~~~~~~-~~~~-------------~~l~~~~~vi~~D~~ 69 (286)
T PRK03204 15 ESRWFDSSR-GRIHYI--DE----G---T-GPPILLCHGNPTWSFLY-RDII-------------VALRDRFRCVAPDYL 69 (286)
T ss_pred cceEEEcCC-cEEEEE--EC----C---C-CCEEEEECCCCccHHHH-HHHH-------------HHHhCCcEEEEECCC
Confidence 346788754 344322 21 1 1 27899999998655442 1111 223456899999999
Q ss_pred cccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeee
Q 018274 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA 196 (358)
Q Consensus 117 vG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~ 196 (358)
|.|.|.... ....+.++.++++..+++. +...+++|+|+|+||..+-.+|..- +-.+++++
T Consensus 70 -G~G~S~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~va~~~a~~~---------p~~v~~lv 130 (286)
T PRK03204 70 -GFGLSERPS--GFGYQIDEHARVIGEFVDH-------LGLDRYLSMGQDWGGPISMAVAVER---------ADRVRGVV 130 (286)
T ss_pred -CCCCCCCCC--ccccCHHHHHHHHHHHHHH-------hCCCCEEEEEECccHHHHHHHHHhC---------hhheeEEE
Confidence 999985321 1223456666666666653 2346799999999997654444321 23688999
Q ss_pred ccCccC
Q 018274 197 LGDSWI 202 (358)
Q Consensus 197 iGng~i 202 (358)
+.++..
T Consensus 131 l~~~~~ 136 (286)
T PRK03204 131 LGNTWF 136 (286)
T ss_pred EECccc
Confidence 887754
No 25
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.14 E-value=5.8e-06 Score=73.84 Aligned_cols=102 Identities=29% Similarity=0.349 Sum_probs=67.4
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHH-HHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAAND-LTTLLM 146 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~-~~~fl~ 146 (358)
|+||++||.+|.+.. +-.+. ..+.+.++++-+|.| |.|.|.... .....+.++.+++ +..+++
T Consensus 2 ~~vv~~hG~~~~~~~-~~~~~-------------~~L~~~~~v~~~d~~-g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~ 65 (251)
T TIGR03695 2 PVLVFLHGFLGSGAD-WQALI-------------ELLGPHFRCLAIDLP-GHGSSQSPD-EIERYDFEEAAQDILATLLD 65 (251)
T ss_pred CEEEEEcCCCCchhh-HHHHH-------------HHhcccCeEEEEcCC-CCCCCCCCC-ccChhhHHHHHHHHHHHHHH
Confidence 789999999888766 32221 122255899999998 999985421 1223455566665 333333
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
. +..++++|+|+|+||..+..+|.+.. -.++++++-++.
T Consensus 66 ----~---~~~~~~~l~G~S~Gg~ia~~~a~~~~---------~~v~~lil~~~~ 104 (251)
T TIGR03695 66 ----Q---LGIEPFFLVGYSMGGRIALYYALQYP---------ERVQGLILESGS 104 (251)
T ss_pred ----H---cCCCeEEEEEeccHHHHHHHHHHhCc---------hheeeeEEecCC
Confidence 2 23568999999999998887776532 257888886654
No 26
>PRK10749 lysophospholipase L2; Provisional
Probab=98.14 E-value=1e-05 Score=78.51 Aligned_cols=130 Identities=13% Similarity=0.109 Sum_probs=83.4
Q ss_pred eEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccc-ccccccccccCCc
Q 018274 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPV 117 (358)
Q Consensus 39 Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw-~~~~~~l~iDqPv 117 (358)
+++...++..++|+.+.. + ..+|+||.+||-.+.+.. +..+. ..+ .+.++++-+|.|
T Consensus 33 ~~~~~~~g~~l~~~~~~~------~-~~~~~vll~HG~~~~~~~-y~~~~-------------~~l~~~g~~v~~~D~~- 90 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRA------P-HHDRVVVICPGRIESYVK-YAELA-------------YDLFHLGYDVLIIDHR- 90 (330)
T ss_pred eEEEcCCCCEEEEEEccC------C-CCCcEEEEECCccchHHH-HHHHH-------------HHHHHCCCeEEEEcCC-
Confidence 444434456787776642 1 124789999998665543 22221 012 245789999999
Q ss_pred ccccccccCC---CCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeee
Q 018274 118 GTGYSYVEDN---SSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (358)
Q Consensus 118 G~GfS~~~~~---~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkG 194 (358)
|.|.|....+ .....+.++.++|+..+++......+ ..+++++|+|+||..+-.+|..- +-.++|
T Consensus 91 G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~~---------p~~v~~ 158 (330)
T PRK10749 91 GQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQRH---------PGVFDA 158 (330)
T ss_pred CCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHhC---------CCCcce
Confidence 9999964211 11234667888888888876554333 46899999999998765555421 225789
Q ss_pred eeccCccC
Q 018274 195 VALGDSWI 202 (358)
Q Consensus 195 i~iGng~i 202 (358)
+++.++..
T Consensus 159 lvl~~p~~ 166 (330)
T PRK10749 159 IALCAPMF 166 (330)
T ss_pred EEEECchh
Confidence 99988764
No 27
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.13 E-value=6e-06 Score=81.20 Aligned_cols=135 Identities=21% Similarity=0.327 Sum_probs=81.5
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCC
Q 018274 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN 127 (358)
Q Consensus 48 ~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~ 127 (358)
.-.||+.+++++ .+|+.| |+||++||| |.+.+.=|+++..-.+-+...+...+|.+|-..=. | ...+
T Consensus 105 ~~s~Wlvk~P~~-~~pk~D-pVlIYlHGG--------GY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~--~-~~~~ 171 (374)
T PF10340_consen 105 SQSYWLVKAPNR-FKPKSD-PVLIYLHGG--------GYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTS--S-DEHG 171 (374)
T ss_pred cceEEEEeCCcc-cCCCCC-cEEEEEcCC--------eeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccc--c-ccCC
Confidence 446999987543 356444 999999999 45666666665321122222334489999954221 0 0123
Q ss_pred CCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhh
Q 018274 128 SSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (358)
Q Consensus 128 ~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~ 206 (358)
..+++-..|..+ .++-| .+ +....++.|+|+|.||+.+-.+..++.+.+ ... -=|++++-+||+.|..
T Consensus 172 ~~yPtQL~qlv~-~Y~~L---v~---~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~---~~~-~Pk~~iLISPWv~l~~ 239 (374)
T PF10340_consen 172 HKYPTQLRQLVA-TYDYL---VE---SEGNKNIILMGDSAGGNLALSFLQYLKKPN---KLP-YPKSAILISPWVNLVP 239 (374)
T ss_pred CcCchHHHHHHH-HHHHH---Hh---ccCCCeEEEEecCccHHHHHHHHHHHhhcC---CCC-CCceeEEECCCcCCcC
Confidence 345554444444 22222 21 224568999999999999888877764422 222 2378889899999873
No 28
>PLN02578 hydrolase
Probab=98.12 E-value=9.6e-06 Score=79.57 Aligned_cols=99 Identities=21% Similarity=0.175 Sum_probs=67.6
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~ 147 (358)
|-||.+||-++.+..+ .... ..+.+.++++.+|.| |.|.|.... ...+.+..++++.+|++.
T Consensus 87 ~~vvliHG~~~~~~~w-~~~~-------------~~l~~~~~v~~~D~~-G~G~S~~~~---~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 87 LPIVLIHGFGASAFHW-RYNI-------------PELAKKYKVYALDLL-GFGWSDKAL---IEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CeEEEECCCCCCHHHH-HHHH-------------HHHhcCCEEEEECCC-CCCCCCCcc---cccCHHHHHHHHHHHHHH
Confidence 4578999877665442 1111 123456899999999 999986431 123556667788888875
Q ss_pred HHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 148 f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
. ...+++|+|+|+||..+..+|.+..+ .++++++.|+
T Consensus 149 ~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~---------~v~~lvLv~~ 185 (354)
T PLN02578 149 V-------VKEPAVLVGNSLGGFTALSTAVGYPE---------LVAGVALLNS 185 (354)
T ss_pred h-------ccCCeEEEEECHHHHHHHHHHHhChH---------hcceEEEECC
Confidence 3 24689999999999987777765322 5788888665
No 29
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.07 E-value=7.6e-06 Score=76.90 Aligned_cols=102 Identities=16% Similarity=0.103 Sum_probs=70.2
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~ 147 (358)
|.||++||-++.+..+ ..+. .-..+.++++.+|.| |.|.|-... ...+.+..++++.++++.
T Consensus 26 ~plvllHG~~~~~~~w-~~~~-------------~~L~~~~~vi~~Dl~-G~G~S~~~~---~~~~~~~~~~~~~~~i~~ 87 (276)
T TIGR02240 26 TPLLIFNGIGANLELV-FPFI-------------EALDPDLEVIAFDVP-GVGGSSTPR---HPYRFPGLAKLAARMLDY 87 (276)
T ss_pred CcEEEEeCCCcchHHH-HHHH-------------HHhccCceEEEECCC-CCCCCCCCC---CcCcHHHHHHHHHHHHHH
Confidence 6789999977666653 2221 113456899999999 999996321 123566677777777764
Q ss_pred HHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 148 f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
+.-.+++|+|+|+||..+-.+|.+-.+ .++++++.|+...
T Consensus 88 -------l~~~~~~LvG~S~GG~va~~~a~~~p~---------~v~~lvl~~~~~~ 127 (276)
T TIGR02240 88 -------LDYGQVNAIGVSWGGALAQQFAHDYPE---------RCKKLILAATAAG 127 (276)
T ss_pred -------hCcCceEEEEECHHHHHHHHHHHHCHH---------HhhheEEeccCCc
Confidence 234589999999999987777654222 5888888876643
No 30
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.04 E-value=8.4e-06 Score=73.08 Aligned_cols=88 Identities=18% Similarity=0.149 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHH
Q 018274 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl 145 (358)
.+|+||++||-++.+.. +..+.+ ...+.++++.+|.| |.|.|.... ...+.++.++++.+++
T Consensus 12 ~~~~li~~hg~~~~~~~-~~~~~~-------------~l~~~~~v~~~d~~-G~G~s~~~~---~~~~~~~~~~~~~~~i 73 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRM-WDPVLP-------------ALTPDFRVLRYDKR-GHGLSDAPE---GPYSIEDLADDVLALL 73 (251)
T ss_pred CCCeEEEEcCcccchhh-HHHHHH-------------HhhcccEEEEecCC-CCCCCCCCC---CCCCHHHHHHHHHHHH
Confidence 35899999987555554 222221 22346799999999 999985322 2346777888888877
Q ss_pred HHHHhhCcccCCCCEEEEecccccchhhhhHHH
Q 018274 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (358)
Q Consensus 146 ~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~ 178 (358)
+.+ ...+++|+|+|+||..+-.+|.+
T Consensus 74 ~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 74 DHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 642 23579999999999988777764
No 31
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.01 E-value=1.7e-05 Score=79.37 Aligned_cols=107 Identities=20% Similarity=0.210 Sum_probs=68.8
Q ss_pred CCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHH
Q 018274 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl 145 (358)
+.|.||++||.++.+..+.-.+ ..+.+.++++-+|.| |.|.|.... ....+.+++.+.+.+.+
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~--------------~~L~~~~~vi~~D~r-G~G~S~~~~--~~~~~~~~~~~~~~~~i 166 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNF--------------DALASRFRVIAIDQL-GWGGSSRPD--FTCKSTEETEAWFIDSF 166 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHH--------------HHHHhCCEEEEECCC-CCCCCCCCC--cccccHHHHHHHHHHHH
Confidence 3589999999987665521111 234456899999999 999985321 11223344444455556
Q ss_pred HHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 146 ~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
..|.+.. ...+++|+|||+||..+-.+|..- +-.++++++.++.
T Consensus 167 ~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~---------p~~v~~lvl~~p~ 210 (402)
T PLN02894 167 EEWRKAK---NLSNFILLGHSFGGYVAAKYALKH---------PEHVQHLILVGPA 210 (402)
T ss_pred HHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC---------chhhcEEEEECCc
Confidence 6665432 335899999999998766665432 2357888887665
No 32
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.01 E-value=7e-06 Score=75.99 Aligned_cols=94 Identities=18% Similarity=0.126 Sum_probs=64.8
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~ 147 (358)
|.||++||.++++..+ -.+. ..+.+.++++.+|.| |.|.|...+ ..+.++.++++.+
T Consensus 14 ~~ivllHG~~~~~~~w-~~~~-------------~~L~~~~~vi~~Dl~-G~G~S~~~~----~~~~~~~~~~l~~---- 70 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW-RCID-------------EELSSHFTLHLVDLP-GFGRSRGFG----ALSLADMAEAVLQ---- 70 (256)
T ss_pred CeEEEECCCCCChhHH-HHHH-------------HHHhcCCEEEEecCC-CCCCCCCCC----CCCHHHHHHHHHh----
Confidence 5699999988888774 2221 245577899999999 999996421 2355556665432
Q ss_pred HHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 148 f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
+...+++++|+|+||..+..+|.+- +-.++++++-|+
T Consensus 71 -------~~~~~~~lvGhS~Gg~ia~~~a~~~---------p~~v~~lili~~ 107 (256)
T PRK10349 71 -------QAPDKAIWLGWSLGGLVASQIALTH---------PERVQALVTVAS 107 (256)
T ss_pred -------cCCCCeEEEEECHHHHHHHHHHHhC---------hHhhheEEEecC
Confidence 1235799999999999887776532 225778887665
No 33
>PLN02965 Probable pheophorbidase
Probab=97.98 E-value=1.6e-05 Score=73.81 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=67.6
Q ss_pred EEEEcCCCChhhhhhhhhcccCCCcccCccCcccc-ccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHH
Q 018274 70 ILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMEL 148 (358)
Q Consensus 70 ilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw-~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f 148 (358)
||++||.++.+..+-.+. ..+ .+.+.++-+|.| |.|.|-... ....+.++.|+|+..++..
T Consensus 6 vvllHG~~~~~~~w~~~~--------------~~L~~~~~~via~Dl~-G~G~S~~~~--~~~~~~~~~a~dl~~~l~~- 67 (255)
T PLN02965 6 FVFVHGASHGAWCWYKLA--------------TLLDAAGFKSTCVDLT-GAGISLTDS--NTVSSSDQYNRPLFALLSD- 67 (255)
T ss_pred EEEECCCCCCcCcHHHHH--------------HHHhhCCceEEEecCC-cCCCCCCCc--cccCCHHHHHHHHHHHHHh-
Confidence 899999887665531111 223 345789999999 999995322 1234577788888888863
Q ss_pred HhhCcccCC-CCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 149 FNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 149 ~~~~p~~~~-~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
+.. ++++++|+|+||..+..+|.+..+ .++++++-|+.
T Consensus 68 ------l~~~~~~~lvGhSmGG~ia~~~a~~~p~---------~v~~lvl~~~~ 106 (255)
T PLN02965 68 ------LPPDHKVILVGHSIGGGSVTEALCKFTD---------KISMAIYVAAA 106 (255)
T ss_pred ------cCCCCCEEEEecCcchHHHHHHHHhCch---------heeEEEEEccc
Confidence 222 589999999999888777754322 46788876653
No 34
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.97 E-value=4.1e-05 Score=71.49 Aligned_cols=103 Identities=18% Similarity=0.230 Sum_probs=62.5
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccc-ccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw-~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
|.||++||.++.+..+--.+. .-... .+.++++-+|.| |.|.|-..... .. .....++++.++++
T Consensus 31 ~~ivllHG~~~~~~~~~~~~~-----------~~~~l~~~~~~vi~~D~~-G~G~S~~~~~~-~~-~~~~~~~~l~~~l~ 96 (282)
T TIGR03343 31 EAVIMLHGGGPGAGGWSNYYR-----------NIGPFVDAGYRVILKDSP-GFNKSDAVVMD-EQ-RGLVNARAVKGLMD 96 (282)
T ss_pred CeEEEECCCCCchhhHHHHHH-----------HHHHHHhCCCEEEEECCC-CCCCCCCCcCc-cc-ccchhHHHHHHHHH
Confidence 679999998765543211110 00112 235899999999 99999643111 11 11134566666665
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
. +..++++++|+|+||..+-.+|.+-.+ .++++++-++
T Consensus 97 ~-------l~~~~~~lvG~S~Gg~ia~~~a~~~p~---------~v~~lvl~~~ 134 (282)
T TIGR03343 97 A-------LDIEKAHLVGNSMGGATALNFALEYPD---------RIGKLILMGP 134 (282)
T ss_pred H-------cCCCCeeEEEECchHHHHHHHHHhChH---------hhceEEEECC
Confidence 3 345689999999999998887764332 3566665443
No 35
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.97 E-value=4.4e-05 Score=75.13 Aligned_cols=103 Identities=17% Similarity=0.095 Sum_probs=69.5
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
.|.||+|||.|+.+..+ ..+. ....+.++++.+|.| |.|.|..... ...+.++.++++.++|+
T Consensus 88 gp~lvllHG~~~~~~~w-~~~~-------------~~L~~~~~via~Dl~-G~G~S~~~~~--~~~~~~~~a~~l~~~l~ 150 (360)
T PLN02679 88 GPPVLLVHGFGASIPHW-RRNI-------------GVLAKNYTVYAIDLL-GFGASDKPPG--FSYTMETWAELILDFLE 150 (360)
T ss_pred CCeEEEECCCCCCHHHH-HHHH-------------HHHhcCCEEEEECCC-CCCCCCCCCC--ccccHHHHHHHHHHHHH
Confidence 37899999999888764 2221 123456899999999 9999964321 23466778888888887
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
. +...+++|+|+|+||..+-.+|..- .+-.++|+++.|+.
T Consensus 151 ~-------l~~~~~~lvGhS~Gg~ia~~~a~~~--------~P~rV~~LVLi~~~ 190 (360)
T PLN02679 151 E-------VVQKPTVLIGNSVGSLACVIAASES--------TRDLVRGLVLLNCA 190 (360)
T ss_pred H-------hcCCCeEEEEECHHHHHHHHHHHhc--------ChhhcCEEEEECCc
Confidence 4 2346899999999996654444311 01257888887754
No 36
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.95 E-value=6.2e-05 Score=77.01 Aligned_cols=139 Identities=16% Similarity=0.093 Sum_probs=85.0
Q ss_pred cCCCCCCcceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccc
Q 018274 28 LNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKK 107 (358)
Q Consensus 28 ~~~~~~~~~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~ 107 (358)
+|-....+...-|++.++ ..+|++....+ ..+ ..|.||++||.+|.+.++...+.+ . + ...+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~-~~l~~~~~gp~---~~~--~k~~VVLlHG~~~s~~~W~~~~~~---~---L---~~~~~~~ 232 (481)
T PLN03087 168 RWSDCDCKFCTSWLSSSN-ESLFVHVQQPK---DNK--AKEDVLFIHGFISSSAFWTETLFP---N---F---SDAAKST 232 (481)
T ss_pred cccccccceeeeeEeeCC-eEEEEEEecCC---CCC--CCCeEEEECCCCccHHHHHHHHHH---H---H---HHHhhCC
Confidence 344444555567888766 57877765421 111 237899999999888764111100 0 0 0124567
Q ss_pred cccccccCCcccccccccCCCCcccchHHHHHHHH-HHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhC
Q 018274 108 ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLT-TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (358)
Q Consensus 108 ~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~-~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~ 186 (358)
++++.+|.| |.|.|-... ....+.++.++++. .+++ ++...+++|+|+|+||..+-.+|.+-.+
T Consensus 233 yrVia~Dl~-G~G~S~~p~--~~~ytl~~~a~~l~~~ll~-------~lg~~k~~LVGhSmGG~iAl~~A~~~Pe----- 297 (481)
T PLN03087 233 YRLFAVDLL-GFGRSPKPA--DSLYTLREHLEMIERSVLE-------RYKVKSFHIVAHSLGCILALALAVKHPG----- 297 (481)
T ss_pred CEEEEECCC-CCCCCcCCC--CCcCCHHHHHHHHHHHHHH-------HcCCCCEEEEEECHHHHHHHHHHHhChH-----
Confidence 899999999 999985321 12234555565553 3333 2335689999999999987776654222
Q ss_pred cceeeeeeeeccCc
Q 018274 187 KLKLKLGGVALGDS 200 (358)
Q Consensus 187 ~~~inlkGi~iGng 200 (358)
.++++++.++
T Consensus 298 ----~V~~LVLi~~ 307 (481)
T PLN03087 298 ----AVKSLTLLAP 307 (481)
T ss_pred ----hccEEEEECC
Confidence 4778887664
No 37
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.91 E-value=1.6e-05 Score=71.10 Aligned_cols=95 Identities=18% Similarity=0.138 Sum_probs=61.8
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~ 147 (358)
|.||++||.++.+..+ -.+. ..+.+.++++.+|.| |.|.|.... ..+.++.++++...+
T Consensus 5 ~~iv~~HG~~~~~~~~-~~~~-------------~~l~~~~~vi~~d~~-G~G~s~~~~----~~~~~~~~~~~~~~~-- 63 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVF-RCLD-------------EELSAHFTLHLVDLP-GHGRSRGFG----PLSLADAAEAIAAQA-- 63 (245)
T ss_pred ceEEEEcCCCCchhhH-HHHH-------------HhhccCeEEEEecCC-cCccCCCCC----CcCHHHHHHHHHHhC--
Confidence 7899999987766652 2221 122345899999999 999885421 234555555443321
Q ss_pred HHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 148 f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
..+++++|+|+||..+..+|.+-.+ .++++++.++.
T Consensus 64 ---------~~~~~lvG~S~Gg~~a~~~a~~~p~---------~v~~~il~~~~ 99 (245)
T TIGR01738 64 ---------PDPAIWLGWSLGGLVALHIAATHPD---------RVRALVTVASS 99 (245)
T ss_pred ---------CCCeEEEEEcHHHHHHHHHHHHCHH---------hhheeeEecCC
Confidence 2589999999999988777754322 36777775553
No 38
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.87 E-value=4.7e-05 Score=72.08 Aligned_cols=105 Identities=15% Similarity=0.066 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccc-cccccccccCCcccccccccCCCCcccchHHHHHHHHH
Q 018274 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (358)
Q Consensus 65 ~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~-~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~ 143 (358)
+.+|.||++||..+.+..+ ..+. .... +.++++-+|.| |.|.|.... ....+.++.++++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w-~~~~-------------~~L~~~g~~vi~~dl~-g~G~s~~~~--~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCW-YKIR-------------CLMENSGYKVTCIDLK-SAGIDQSDA--DSVTTFDEYNKPLID 78 (273)
T ss_pred CCCCeEEEECCCCCCcCcH-HHHH-------------HHHHhCCCEEEEeccc-CCCCCCCCc--ccCCCHHHHHHHHHH
Confidence 3458999999987776653 2221 1122 24799999999 999875321 123567777777777
Q ss_pred HHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 144 fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
+++. .. ...+++|+||||||..+..++....+ .++++++.++.
T Consensus 79 ~i~~----l~--~~~~v~lvGhS~GG~v~~~~a~~~p~---------~v~~lv~~~~~ 121 (273)
T PLN02211 79 FLSS----LP--ENEKVILVGHSAGGLSVTQAIHRFPK---------KICLAVYVAAT 121 (273)
T ss_pred HHHh----cC--CCCCEEEEEECchHHHHHHHHHhChh---------heeEEEEeccc
Confidence 7763 11 14689999999999977766643222 46777776554
No 39
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.85 E-value=8.5e-05 Score=73.99 Aligned_cols=105 Identities=19% Similarity=0.149 Sum_probs=72.1
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCC-CcccchHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNS-SFVKNDVEAANDLTTLL 145 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~-~~~~~~~~~a~~~~~fl 145 (358)
.|.||++||.|+.+..+ ..+. ..+.+.++++-+|.| |.|+|...... ....+.++.++++..++
T Consensus 127 ~~~ivllHG~~~~~~~w-~~~~-------------~~L~~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i 191 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSY-RKVL-------------PVLSKNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLI 191 (383)
T ss_pred CCeEEEECCCCCCHHHH-HHHH-------------HHHhcCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHH
Confidence 48999999999877653 2221 123456899999999 99999753221 12346778888888888
Q ss_pred HHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccC
Q 018274 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (358)
Q Consensus 146 ~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i 202 (358)
+. ....+++|+|+|+||..+-.+|..- +-.++++++-|+..
T Consensus 192 ~~-------l~~~~~~LvG~s~GG~ia~~~a~~~---------P~~v~~lILi~~~~ 232 (383)
T PLN03084 192 DE-------LKSDKVSLVVQGYFSPPVVKYASAH---------PDKIKKLILLNPPL 232 (383)
T ss_pred HH-------hCCCCceEEEECHHHHHHHHHHHhC---------hHhhcEEEEECCCC
Confidence 75 2345799999999996554444322 22588899877654
No 40
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.77 E-value=0.00011 Score=69.51 Aligned_cols=131 Identities=11% Similarity=0.037 Sum_probs=78.7
Q ss_pred CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccc-cccccccccCCcccccccc
Q 018274 46 KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYV 124 (358)
Q Consensus 46 ~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~-~~~~~l~iDqPvG~GfS~~ 124 (358)
..+.|.|+++... + +.+|+||++||-.+-..-..-.+.. --..+. +.++++-+|.| |.|.|..
T Consensus 9 ~g~~~~~~~~p~~----~-~~~~~VlllHG~g~~~~~~~~~~~~----------la~~La~~Gy~Vl~~Dl~-G~G~S~g 72 (266)
T TIGR03101 9 HGFRFCLYHPPVA----V-GPRGVVIYLPPFAEEMNKSRRMVAL----------QARAFAAGGFGVLQIDLY-GCGDSAG 72 (266)
T ss_pred CCcEEEEEecCCC----C-CCceEEEEECCCcccccchhHHHHH----------HHHHHHHCCCEEEEECCC-CCCCCCC
Confidence 4578888886421 1 2258999999854311100001100 001232 35799999999 9999864
Q ss_pred cCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 125 EDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 125 ~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
... ..+.+...+|+..+++ |++.. ...+++|+|+|+||..+..+|.+. +-.++++++-++.++.
T Consensus 73 ~~~---~~~~~~~~~Dv~~ai~-~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~---------p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 73 DFA---AARWDVWKEDVAAAYR-WLIEQ---GHPPVTLWGLRLGALLALDAANPL---------AAKCNRLVLWQPVVSG 136 (266)
T ss_pred ccc---cCCHHHHHHHHHHHHH-HHHhc---CCCCEEEEEECHHHHHHHHHHHhC---------ccccceEEEeccccch
Confidence 321 1244455666665543 34332 246899999999999877666432 2357889998888776
Q ss_pred hhhh
Q 018274 205 EDFV 208 (358)
Q Consensus 205 ~~q~ 208 (358)
..+.
T Consensus 137 ~~~l 140 (266)
T TIGR03101 137 KQQL 140 (266)
T ss_pred HHHH
Confidence 5443
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.70 E-value=9.3e-05 Score=72.13 Aligned_cols=101 Identities=19% Similarity=0.109 Sum_probs=68.4
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
.|.||++||.+|.+.. +..+.+ .+.+.++++-+|.| |.|.|-... ...+.++.++++..+++
T Consensus 131 ~~~vl~~HG~~~~~~~-~~~~~~-------------~l~~~~~v~~~d~~-g~G~s~~~~---~~~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 131 GTPVVLIHGFGGDLNN-WLFNHA-------------ALAAGRPVIALDLP-GHGASSKAV---GAGSLDELAAAVLAFLD 192 (371)
T ss_pred CCeEEEECCCCCccch-HHHHHH-------------HHhcCCEEEEEcCC-CCCCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 4889999999888776 332221 12334789999999 999985321 23466677777766665
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
. +...+++|+|+|+||..+..+|..- +-.++++++-++.
T Consensus 193 ~-------~~~~~~~lvG~S~Gg~~a~~~a~~~---------~~~v~~lv~~~~~ 231 (371)
T PRK14875 193 A-------LGIERAHLVGHSMGGAVALRLAARA---------PQRVASLTLIAPA 231 (371)
T ss_pred h-------cCCccEEEEeechHHHHHHHHHHhC---------chheeEEEEECcC
Confidence 3 3345899999999999888777542 1246777765543
No 42
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.70 E-value=0.00014 Score=70.49 Aligned_cols=110 Identities=22% Similarity=0.277 Sum_probs=75.9
Q ss_pred CCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHH
Q 018274 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl 145 (358)
+++-|+++||= |++. |+|. .|=.+..+..||-.||.| |-|.|-.. .+..+.+.+-+.+++-+
T Consensus 89 ~~~plVliHGy-GAg~---g~f~----------~Nf~~La~~~~vyaiDll-G~G~SSRP---~F~~d~~~~e~~fvesi 150 (365)
T KOG4409|consen 89 NKTPLVLIHGY-GAGL---GLFF----------RNFDDLAKIRNVYAIDLL-GFGRSSRP---KFSIDPTTAEKEFVESI 150 (365)
T ss_pred CCCcEEEEecc-chhH---HHHH----------HhhhhhhhcCceEEeccc-CCCCCCCC---CCCCCcccchHHHHHHH
Confidence 34667889963 3332 2332 233566678899999999 99999753 24444444555788999
Q ss_pred HHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 146 ~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
++|..... -.+.+|+|||+||......|.+-.+ .++-++|-+||--|+
T Consensus 151 E~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPe---------rV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 151 EQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPE---------RVEKLILVSPWGFPE 198 (365)
T ss_pred HHHHHHcC---CcceeEeeccchHHHHHHHHHhChH---------hhceEEEeccccccc
Confidence 99998655 3589999999999887777665544 366778877775544
No 43
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.65 E-value=7.8e-05 Score=78.80 Aligned_cols=134 Identities=20% Similarity=0.242 Sum_probs=79.4
Q ss_pred CCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhh--hhcccCCCcccCccCccccccccccccccCCcccccc
Q 018274 45 PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIG--NFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYS 122 (358)
Q Consensus 45 ~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g--~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS 122 (358)
++..+..|++.-.. .++.+..|+|+|+|||| +++ .| ...| -..=+.+-+.|++++-.--+||+
T Consensus 374 dG~~i~~~l~~P~~--~~~~k~yP~i~~~hGGP--~~~-~~~~~~~~----------~q~~~~~G~~V~~~n~RGS~GyG 438 (620)
T COG1506 374 DGETIHGWLYKPPG--FDPRKKYPLIVYIHGGP--SAQ-VGYSFNPE----------IQVLASAGYAVLAPNYRGSTGYG 438 (620)
T ss_pred CCCEEEEEEecCCC--CCCCCCCCEEEEeCCCC--ccc-cccccchh----------hHHHhcCCeEEEEeCCCCCCccH
Confidence 35678888886432 34444569999999999 444 33 1111 11233556788888855334544
Q ss_pred cccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccC
Q 018274 123 YVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (358)
Q Consensus 123 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i 202 (358)
..-.....-.--....+|+..+++ |+++.|.-...++.|+|.||||...-.++.. .. .+|..+...|.+
T Consensus 439 ~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~---------~~-~f~a~~~~~~~~ 507 (620)
T COG1506 439 REFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATK---------TP-RFKAAVAVAGGV 507 (620)
T ss_pred HHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhc---------Cc-hhheEEeccCcc
Confidence 321000000111234567788888 8889998877889999999999654333321 12 366666666655
Q ss_pred Ch
Q 018274 203 SP 204 (358)
Q Consensus 203 ~p 204 (358)
+-
T Consensus 508 ~~ 509 (620)
T COG1506 508 DW 509 (620)
T ss_pred hh
Confidence 53
No 44
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.64 E-value=0.0003 Score=67.74 Aligned_cols=138 Identities=17% Similarity=0.250 Sum_probs=95.3
Q ss_pred cceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccccccccccc
Q 018274 35 SEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVD 114 (358)
Q Consensus 35 ~~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iD 114 (358)
....|+....++..++|+.+.+.+ ++ +.+|+++||.=..+.- +--+. ..=-..-+.++=+|
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~---~~---~g~Vvl~HG~~Eh~~r-y~~la------------~~l~~~G~~V~~~D 68 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPE---PP---KGVVVLVHGLGEHSGR-YEELA------------DDLAARGFDVYALD 68 (298)
T ss_pred ccccceeecCCCceEEEEeecCCC---CC---CcEEEEecCchHHHHH-HHHHH------------HHHHhCCCEEEEec
Confidence 344577777777899999887532 22 2699999998777755 32221 11113456788899
Q ss_pred CCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeee
Q 018274 115 NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (358)
Q Consensus 115 qPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkG 194 (358)
+| |.|.|.. .......+-++...|+..|++..-..+| ..|+||+|||.||-.+...+... .-+++|
T Consensus 69 ~R-GhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~---------~~~i~~ 134 (298)
T COG2267 69 LR-GHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARY---------PPRIDG 134 (298)
T ss_pred CC-CCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhC---------CccccE
Confidence 99 9999973 2334555667777777777776555444 56999999999997765554432 247999
Q ss_pred eeccCccCChh
Q 018274 195 VALGDSWISPE 205 (358)
Q Consensus 195 i~iGng~i~p~ 205 (358)
++|-+|++.+.
T Consensus 135 ~vLssP~~~l~ 145 (298)
T COG2267 135 LVLSSPALGLG 145 (298)
T ss_pred EEEECccccCC
Confidence 99999988876
No 45
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.60 E-value=0.0002 Score=67.45 Aligned_cols=106 Identities=25% Similarity=0.373 Sum_probs=72.7
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHH
Q 018274 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (358)
Q Consensus 65 ~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~f 144 (358)
+.-|+++.+||| |.|++.+..|.- +-.=.-...++-+|-. |.|-+...++. ..+.+..++|+...
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~~~~r~~a~DlR-gHGeTk~~~e~--dlS~eT~~KD~~~~ 136 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFAS-----------ELKSKIRCRCLALDLR-GHGETKVENED--DLSLETMSKDFGAV 136 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHH-----------HHHhhcceeEEEeecc-ccCccccCChh--hcCHHHHHHHHHHH
Confidence 345999999976 677665555530 0000112334779988 99999887654 36888999999999
Q ss_pred HHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeec
Q 018274 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (358)
Q Consensus 145 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~i 197 (358)
++.+|..-|. +++|+|||.||-.+...|.. +.--+|-|+.+
T Consensus 137 i~~~fge~~~----~iilVGHSmGGaIav~~a~~--------k~lpsl~Gl~v 177 (343)
T KOG2564|consen 137 IKELFGELPP----QIILVGHSMGGAIAVHTAAS--------KTLPSLAGLVV 177 (343)
T ss_pred HHHHhccCCC----ceEEEeccccchhhhhhhhh--------hhchhhhceEE
Confidence 9999865443 69999999999877555432 11125888887
No 46
>PRK05855 short chain dehydrogenase; Validated
Probab=97.58 E-value=0.00023 Score=73.51 Aligned_cols=84 Identities=15% Similarity=0.256 Sum_probs=59.6
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
.|.||++||.++.+..+ .-+. .-+.+.++++.+|.| |.|.|..... ....+.++.++|+..+++
T Consensus 25 ~~~ivllHG~~~~~~~w-~~~~-------------~~L~~~~~Vi~~D~~-G~G~S~~~~~-~~~~~~~~~a~dl~~~i~ 88 (582)
T PRK05855 25 RPTVVLVHGYPDNHEVW-DGVA-------------PLLADRFRVVAYDVR-GAGRSSAPKR-TAAYTLARLADDFAAVID 88 (582)
T ss_pred CCeEEEEcCCCchHHHH-HHHH-------------HHhhcceEEEEecCC-CCCCCCCCCc-ccccCHHHHHHHHHHHHH
Confidence 48999999999877653 2221 112445789999999 9999975322 123467888899999888
Q ss_pred HHHhhCcccCCCCEEEEecccccchh
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFA 172 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yv 172 (358)
..- ...|++|+|+|+||..+
T Consensus 89 ~l~------~~~~~~lvGhS~Gg~~a 108 (582)
T PRK05855 89 AVS------PDRPVHLLAHDWGSIQG 108 (582)
T ss_pred HhC------CCCcEEEEecChHHHHH
Confidence 521 13479999999999544
No 47
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.57 E-value=0.00034 Score=81.48 Aligned_cols=103 Identities=19% Similarity=0.209 Sum_probs=70.7
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCC-----CCcccchHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN-----SSFVKNDVEAANDL 141 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~-----~~~~~~~~~~a~~~ 141 (358)
.|.||+|||.+|.+..+ ..+. ..+.+.++++.+|.| |.|.|..... .....+.+..++++
T Consensus 1371 ~~~vVllHG~~~s~~~w-~~~~-------------~~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~si~~~a~~l 1435 (1655)
T PLN02980 1371 GSVVLFLHGFLGTGEDW-IPIM-------------KAISGSARCISIDLP-GHGGSKIQNHAKETQTEPTLSVELVADLL 1435 (1655)
T ss_pred CCeEEEECCCCCCHHHH-HHHH-------------HHHhCCCEEEEEcCC-CCCCCCCccccccccccccCCHHHHHHHH
Confidence 48999999999998774 2221 123345799999999 9999864321 11234567778877
Q ss_pred HHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 142 ~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
..+++. +...+++|+|+|+||..+-.+|.+..+ .++++++-++
T Consensus 1436 ~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~---------~V~~lVlis~ 1478 (1655)
T PLN02980 1436 YKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD---------KIEGAVIISG 1478 (1655)
T ss_pred HHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH---------hhCEEEEECC
Confidence 777763 334689999999999887777654322 4677776554
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.48 E-value=0.00044 Score=69.58 Aligned_cols=80 Identities=14% Similarity=0.190 Sum_probs=53.4
Q ss_pred ccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhC
Q 018274 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (358)
Q Consensus 107 ~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~ 186 (358)
-+++|-+|.| |+|.|.... ...+..... ..+..|+...|.....++.|+|+|+||.+++.+|..-
T Consensus 222 Gy~vl~~D~p-G~G~s~~~~---~~~d~~~~~----~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~------- 286 (414)
T PRK05077 222 GIAMLTIDMP-SVGFSSKWK---LTQDSSLLH----QAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE------- 286 (414)
T ss_pred CCEEEEECCC-CCCCCCCCC---ccccHHHHH----HHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC-------
Confidence 4789999999 999985321 111122222 2334455556666667899999999999998877531
Q ss_pred cceeeeeeeeccCccCC
Q 018274 187 KLKLKLGGVALGDSWIS 203 (358)
Q Consensus 187 ~~~inlkGi~iGng~i~ 203 (358)
+-.++++++.+|.++
T Consensus 287 --p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 287 --PPRLKAVACLGPVVH 301 (414)
T ss_pred --CcCceEEEEECCccc
Confidence 125788888777654
No 49
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.46 E-value=0.00036 Score=61.55 Aligned_cols=104 Identities=27% Similarity=0.282 Sum_probs=62.3
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
.|.++++||+|+++..+...+.. +..... + ++++.+|+| |.|.|. . . ..+....++++..+++
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~-------~~~~~~---~-~~~~~~d~~-g~g~s~-~-~---~~~~~~~~~~~~~~~~ 83 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKV-------LPALAA---R-YRVIAPDLR-GHGRSD-P-A---GYSLSAYADDLAALLD 83 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHH-------hhcccc---c-eEEEEeccc-CCCCCC-c-c---cccHHHHHHHHHHHHH
Confidence 37999999999999874210110 000111 1 899999999 999997 1 1 1112222555555554
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
++...+++++|+|+||..+-.++....+ .++++++-++...
T Consensus 84 -------~~~~~~~~l~G~S~Gg~~~~~~~~~~p~---------~~~~~v~~~~~~~ 124 (282)
T COG0596 84 -------ALGLEKVVLVGHSMGGAVALALALRHPD---------RVRGLVLIGPAPP 124 (282)
T ss_pred -------HhCCCceEEEEecccHHHHHHHHHhcch---------hhheeeEecCCCC
Confidence 2333459999999998766655554322 4667776555443
No 50
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.46 E-value=0.0004 Score=62.98 Aligned_cols=113 Identities=15% Similarity=0.116 Sum_probs=57.9
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccc-----cCCC-CcccchHHHH
Q 018274 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYV-----EDNS-SFVKNDVEAA 138 (358)
Q Consensus 65 ~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~-----~~~~-~~~~~~~~~a 138 (358)
+.+|+||+|||+++..+. +..-. + +. ...=...+.+|..|.| |.|.+.. .... .....+ .
T Consensus 11 ~~~P~vv~lHG~~~~~~~-~~~~~--~-~~------~~a~~~g~~Vv~Pd~~-g~~~~~~~~~~~~~~~~~~~~~~---~ 76 (212)
T TIGR01840 11 GPRALVLALHGCGQTASA-YVIDW--G-WK------AAADRYGFVLVAPEQT-SYNSSNNCWDWFFTHHRARGTGE---V 76 (212)
T ss_pred CCCCEEEEeCCCCCCHHH-Hhhhc--C-hH------HHHHhCCeEEEecCCc-CccccCCCCCCCCccccCCCCcc---H
Confidence 346999999999987664 21000 0 00 0000123578888877 5443221 0000 001112 2
Q ss_pred HHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 139 ~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
.++..+++...++++ ....+++|+|+|.||..+-.+|..- +-.+.++++..|.
T Consensus 77 ~~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~~---------p~~~~~~~~~~g~ 129 (212)
T TIGR01840 77 ESLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCTY---------PDVFAGGASNAGL 129 (212)
T ss_pred HHHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHhC---------chhheEEEeecCC
Confidence 333344443333332 2346899999999998765555431 1136676665554
No 51
>PLN02511 hydrolase
Probab=97.41 E-value=0.001 Score=66.35 Aligned_cols=117 Identities=14% Similarity=0.127 Sum_probs=70.4
Q ss_pred eEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhh-hhhhhcccCCCcccCccCccccccccccccccCCc
Q 018274 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGV-GIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPV 117 (358)
Q Consensus 39 Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~-~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPv 117 (358)
-++...++..+.+..+....+ ..+ .++|+||.+||..|+|.. ..--+. ..-..+.++++-+|.|
T Consensus 74 e~l~~~DG~~~~ldw~~~~~~-~~~-~~~p~vvllHG~~g~s~~~y~~~~~------------~~~~~~g~~vv~~d~r- 138 (388)
T PLN02511 74 ECLRTPDGGAVALDWVSGDDR-ALP-ADAPVLILLPGLTGGSDDSYVRHML------------LRARSKGWRVVVFNSR- 138 (388)
T ss_pred EEEECCCCCEEEEEecCcccc-cCC-CCCCEEEEECCCCCCCCCHHHHHHH------------HHHHHCCCEEEEEecC-
Confidence 466666655555433332111 112 346999999999998743 110010 1112456789999999
Q ss_pred ccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhH
Q 018274 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (358)
Q Consensus 118 G~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a 176 (358)
|.|-|-...+..+ ....++|+..+++..-.++| +.+++++|+|.||..+-.++
T Consensus 139 G~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 139 GCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYL 191 (388)
T ss_pred CCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHH
Confidence 9998864322211 22345566666665555555 46899999999998765444
No 52
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.33 E-value=0.0017 Score=61.97 Aligned_cols=136 Identities=16% Similarity=0.136 Sum_probs=87.8
Q ss_pred ceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccc-cccccccccc
Q 018274 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVD 114 (358)
Q Consensus 36 ~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw-~~~~~~l~iD 114 (358)
...-|++-..+..+|.-...... .+ +.+-+|+++||.-+-+|..+--+. -.. ...+-+.-+|
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~---~~-~pr~lv~~~HG~g~~~s~~~~~~a-------------~~l~~~g~~v~a~D 89 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLS---GT-EPRGLVFLCHGYGEHSSWRYQSTA-------------KRLAKSGFAVYAID 89 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCC---CC-CCceEEEEEcCCcccchhhHHHHH-------------HHHHhCCCeEEEee
Confidence 33456665556788876664311 11 335699999998777653221111 001 1123466789
Q ss_pred CCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeee
Q 018274 115 NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (358)
Q Consensus 115 qPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkG 194 (358)
++ |.|.|.+. ..++.+-+.+++|...|+..+- ..++++..|.|++|||.||-.+-.++.+ . +--..|
T Consensus 90 ~~-GhG~SdGl--~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k------~---p~~w~G 156 (313)
T KOG1455|consen 90 YE-GHGRSDGL--HAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK------D---PNFWDG 156 (313)
T ss_pred cc-CCCcCCCC--cccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh------C---Cccccc
Confidence 98 99999864 3588899999999988887654 4567778899999999999654333322 1 224677
Q ss_pred eeccCcc
Q 018274 195 VALGDSW 201 (358)
Q Consensus 195 i~iGng~ 201 (358)
+++-.++
T Consensus 157 ~ilvaPm 163 (313)
T KOG1455|consen 157 AILVAPM 163 (313)
T ss_pred ceeeecc
Confidence 7776665
No 53
>PRK10566 esterase; Provisional
Probab=97.32 E-value=0.00059 Score=62.78 Aligned_cols=96 Identities=18% Similarity=0.251 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccc-ccccccccCCcccccccccCCCCcc----cchHHHHHH
Q 018274 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFV----KNDVEAAND 140 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~-~~~~l~iDqPvG~GfS~~~~~~~~~----~~~~~~a~~ 140 (358)
..|+||++||++|.... +..+ ...|.+ -++++.+|.| |.|-|+...+.... .......++
T Consensus 26 ~~p~vv~~HG~~~~~~~-~~~~-------------~~~l~~~G~~v~~~d~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~ 90 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLV-YSYF-------------AVALAQAGFRVIMPDAP-MHGARFSGDEARRLNHFWQILLQNMQE 90 (249)
T ss_pred CCCEEEEeCCCCcccch-HHHH-------------HHHHHhCCCEEEEecCC-cccccCCCccccchhhHHHHHHHHHHH
Confidence 35999999999887654 2222 123333 4789999998 88876532211111 111233455
Q ss_pred HHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHH
Q 018274 141 LTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (358)
Q Consensus 141 ~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~ 177 (358)
+..++. ++...+....++++|+|+|+||..+-.++.
T Consensus 91 ~~~~~~-~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 91 FPTLRA-AIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHHHH-HHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 544443 333444444578999999999998766554
No 54
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.30 E-value=0.0011 Score=64.67 Aligned_cols=96 Identities=21% Similarity=0.191 Sum_probs=62.9
Q ss_pred cccccccccCCcccccccccCC-CCcccchHHHHHHHHHHHHHHHhhC----------------cccC-CCCEEEEeccc
Q 018274 106 KKADLLFVDNPVGTGYSYVEDN-SSFVKNDVEAANDLTTLLMELFNKN----------------EILQ-KSPLFIVAESY 167 (358)
Q Consensus 106 ~~~~~l~iDqPvG~GfS~~~~~-~~~~~~~~~~a~~~~~fl~~f~~~~----------------p~~~-~~~~~i~GeSY 167 (358)
+.++++-+|.| |.|.|...+. .....+-++.++|+..+++..-+.. .++. +.|++|+|||+
T Consensus 73 ~G~~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSm 151 (332)
T TIGR01607 73 NGYSVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSM 151 (332)
T ss_pred CCCcEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccC
Confidence 45789999998 9999975422 2334577888899999988654310 0232 57999999999
Q ss_pred ccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 168 GGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 168 gG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
||..+..++....+..+ ..-...++|+++-.|++.
T Consensus 152 Gg~i~~~~~~~~~~~~~-~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 152 GGNIALRLLELLGKSNE-NNDKLNIKGCISLSGMIS 186 (332)
T ss_pred ccHHHHHHHHHhccccc-cccccccceEEEeccceE
Confidence 99877665544322100 001236889987676653
No 55
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.29 E-value=0.00045 Score=67.32 Aligned_cols=75 Identities=17% Similarity=0.108 Sum_probs=52.8
Q ss_pred cccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCC-CCEEEEecccccchhhhhHHHHHHHHH
Q 018274 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIE 184 (358)
Q Consensus 106 ~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~-~~~~i~GeSYgG~yvp~~a~~i~~~~~ 184 (358)
+.++++.+|.| |.|-|.. . ..+.++.|+|+..+|+. +.- +.+.|+|+|+||..+-.+|.+-.+
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~~---~--~~~~~~~a~dl~~ll~~-------l~l~~~~~lvG~SmGG~vA~~~A~~~P~--- 161 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSLD---V--PIDTADQADAIALLLDA-------LGIARLHAFVGYSYGALVGLQFASRHPA--- 161 (343)
T ss_pred cccEEEEEeCC-CCCCCCC---C--CCCHHHHHHHHHHHHHH-------cCCCcceEEEEECHHHHHHHHHHHHChH---
Confidence 57899999999 8776632 1 22456678888888874 223 346799999999887777765332
Q ss_pred hCcceeeeeeeeccCccC
Q 018274 185 AGKLKLKLGGVALGDSWI 202 (358)
Q Consensus 185 ~~~~~inlkGi~iGng~i 202 (358)
.++++++.++..
T Consensus 162 ------~V~~LvLi~s~~ 173 (343)
T PRK08775 162 ------RVRTLVVVSGAH 173 (343)
T ss_pred ------hhheEEEECccc
Confidence 578888877643
No 56
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.28 E-value=0.00027 Score=67.26 Aligned_cols=109 Identities=19% Similarity=0.212 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCCChh-hhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHH
Q 018274 66 PWPIILWLQGGPGAS-GVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (358)
Q Consensus 66 ~~Plilwl~GGPG~s-s~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~f 144 (358)
.+|++|++||-.|.. ..+.-.+. +...-...+|++.+|.+-+..-.|. ....+.+.+++++..+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~-----------~~ll~~~~~nVi~vD~~~~~~~~y~----~a~~~~~~v~~~la~~ 99 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLR-----------KAYLSRGDYNVIVVDWGRGANPNYP----QAVNNTRVVGAELAKF 99 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHH-----------HHHHhcCCCEEEEEECccccccChH----HHHHhHHHHHHHHHHH
Confidence 359999999977755 22111110 1111124689999998743111111 1123455567777777
Q ss_pred HHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccC
Q 018274 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD 199 (358)
Q Consensus 145 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGn 199 (358)
|+...+.. .....+++|+|+|+||+.+-.+|.+..+ +++.|+.-+
T Consensus 100 l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~---------~v~~iv~LD 144 (275)
T cd00707 100 LDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG---------KLGRITGLD 144 (275)
T ss_pred HHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC---------ccceeEEec
Confidence 77655432 1234589999999999998777765421 577888744
No 57
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.13 E-value=0.0013 Score=62.25 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=68.4
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccc-ccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~-~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
|-+|.+|||++...-....+.. --..+.+ .++++-+|.| |.|.|... ..+.++..+|+..+++
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~----------la~~l~~~G~~v~~~Dl~-G~G~S~~~-----~~~~~~~~~d~~~~~~ 90 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVL----------LARRLAEAGFPVLRFDYR-GMGDSEGE-----NLGFEGIDADIAAAID 90 (274)
T ss_pred CeEEEEeCCccccCCchhHHHH----------HHHHHHHCCCEEEEeCCC-CCCCCCCC-----CCCHHHHHHHHHHHHH
Confidence 6788889999643210001100 0122333 4789999999 99988632 1244566777777877
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
.+-+..|.+ .+++++|+|.||..+-.+|.. .-.++|+++-|+++..
T Consensus 91 ~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~----------~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 91 AFREAAPHL--RRIVAWGLCDAASAALLYAPA----------DLRVAGLVLLNPWVRT 136 (274)
T ss_pred HHHhhCCCC--CcEEEEEECHHHHHHHHHhhh----------CCCccEEEEECCccCC
Confidence 655555543 469999999999754443321 1268999999998653
No 58
>PLN02442 S-formylglutathione hydrolase
Probab=97.12 E-value=0.002 Score=61.30 Aligned_cols=57 Identities=28% Similarity=0.282 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 137 AANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 137 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
..+++...+..++.. ....+++|+|+|+||+-+-.+|.+- +-.+++++..+|..+|.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~---------p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKN---------PDKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhC---------chhEEEEEEECCccCcc
Confidence 445555566665543 3446799999999998665555431 12478889989988764
No 59
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.10 E-value=0.0012 Score=66.86 Aligned_cols=111 Identities=11% Similarity=0.018 Sum_probs=65.3
Q ss_pred CCCEEEEEcCCCChhh--hhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHH
Q 018274 66 PWPIILWLQGGPGASG--VGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss--~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~ 143 (358)
++|++|.+||-.+... .+...+. ..-..-...+|++-+|.| |-|-|.... ...+...+++++.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~----------~al~~~~~d~nVI~VDw~-g~g~s~y~~---a~~~t~~vg~~la~ 105 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLV----------AALYEREPSANVIVVDWL-SRAQQHYPT---SAAYTKLVGKDVAK 105 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHH----------HHHHhccCCCEEEEEECC-CcCCCCCcc---ccccHHHHHHHHHH
Confidence 4599999999765321 1111010 000011135899999998 656443211 12345677888888
Q ss_pred HHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 144 fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
+|+...+.. .+.-.+++|+|+|.|||.+-.+|.+. +-.+..|++-||
T Consensus 106 lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~---------p~rV~rItgLDP 152 (442)
T TIGR03230 106 FVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT---------KHKVNRITGLDP 152 (442)
T ss_pred HHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC---------CcceeEEEEEcC
Confidence 887544332 24456899999999999887766532 124566666444
No 60
>PRK10985 putative hydrolase; Provisional
Probab=97.09 E-value=0.0037 Score=60.49 Aligned_cols=120 Identities=14% Similarity=0.106 Sum_probs=61.7
Q ss_pred CcceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhh-hcccCCCcccCccCcccccccccccc
Q 018274 34 ASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGN-FEEVGPFDTYLKPRNSTWLKKADLLF 112 (358)
Q Consensus 34 ~~~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~-~~e~GP~~~~~~~n~~sw~~~~~~l~ 112 (358)
.+.+.=.++..++..+.+++...+ ..+ .++|+||.+||.+|.+...+.. +. ..--.+-++++-
T Consensus 29 ~~~~~~~~~~~dg~~~~l~w~~~~---~~~-~~~p~vll~HG~~g~~~~~~~~~~~------------~~l~~~G~~v~~ 92 (324)
T PRK10985 29 FTPYWQRLELPDGDFVDLAWSEDP---AQA-RHKPRLVLFHGLEGSFNSPYAHGLL------------EAAQKRGWLGVV 92 (324)
T ss_pred CCcceeEEECCCCCEEEEecCCCC---ccC-CCCCEEEEeCCCCCCCcCHHHHHHH------------HHHHHCCCEEEE
Confidence 334444466665555544433321 112 3459999999999975431110 10 000112356777
Q ss_pred ccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhH
Q 018274 113 VDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (358)
Q Consensus 113 iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a 176 (358)
+|.+ |.|-|-......+.... .+|+..+++..-++++ ..+++++|+|+||..+-..+
T Consensus 93 ~d~r-G~g~~~~~~~~~~~~~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~ 149 (324)
T PRK10985 93 MHFR-GCSGEPNRLHRIYHSGE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLL 149 (324)
T ss_pred EeCC-CCCCCccCCcceECCCc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHH
Confidence 8988 87754322111111111 3444444432222333 46899999999997654433
No 61
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.07 E-value=0.00056 Score=61.01 Aligned_cols=77 Identities=22% Similarity=0.190 Sum_probs=48.9
Q ss_pred cccccccCCccccccccc-CCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhC
Q 018274 108 ADLLFVDNPVGTGYSYVE-DNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (358)
Q Consensus 108 ~~~l~iDqPvG~GfS~~~-~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~ 186 (358)
++|+-+|+| |.|+|... .......+.++.++++..++ +..+ ..+++++|+||||..+-.+|..-
T Consensus 1 f~vi~~d~r-G~g~S~~~~~~~~~~~~~~~~~~~~~~~~----~~l~---~~~~~~vG~S~Gg~~~~~~a~~~------- 65 (230)
T PF00561_consen 1 FDVILFDLR-GFGYSSPHWDPDFPDYTTDDLAADLEALR----EALG---IKKINLVGHSMGGMLALEYAAQY------- 65 (230)
T ss_dssp EEEEEEECT-TSTTSSSCCGSGSCTHCHHHHHHHHHHHH----HHHT---TSSEEEEEETHHHHHHHHHHHHS-------
T ss_pred CEEEEEeCC-CCCCCCCCccCCcccccHHHHHHHHHHHH----HHhC---CCCeEEEEECCChHHHHHHHHHC-------
Confidence 357789999 99999841 01112233444555444444 4333 45699999999998876666542
Q ss_pred cceeeeeeeeccCcc
Q 018274 187 KLKLKLGGVALGDSW 201 (358)
Q Consensus 187 ~~~inlkGi~iGng~ 201 (358)
+-.++++++-++.
T Consensus 66 --p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 66 --PERVKKLVLISPP 78 (230)
T ss_dssp --GGGEEEEEEESES
T ss_pred --chhhcCcEEEeee
Confidence 1278899886664
No 62
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.04 E-value=0.0051 Score=59.33 Aligned_cols=156 Identities=18% Similarity=0.129 Sum_probs=98.9
Q ss_pred CCCcceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccc-ccc
Q 018274 32 QDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKK-ADL 110 (358)
Q Consensus 32 ~~~~~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~-~~~ 110 (358)
.....+.+|+++++ ..+++-+. -+ .+.|+++.|||=|-.+=++- .---..... .++
T Consensus 18 ~~~~~~hk~~~~~g---I~~h~~e~-----g~-~~gP~illlHGfPe~wyswr--------------~q~~~la~~~~rv 74 (322)
T KOG4178|consen 18 NLSAISHKFVTYKG---IRLHYVEG-----GP-GDGPIVLLLHGFPESWYSWR--------------HQIPGLASRGYRV 74 (322)
T ss_pred ChhhcceeeEEEcc---EEEEEEee-----cC-CCCCEEEEEccCCccchhhh--------------hhhhhhhhcceEE
Confidence 44455668999876 67777663 23 23499999999996664320 000112223 789
Q ss_pred ccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCccee
Q 018274 111 LFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKL 190 (358)
Q Consensus 111 l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~i 190 (358)
+.+|.+ |.|+|..-.. ...-+....+.|+..+|.. +..++.+++||+||+..+=.+|....++.+. -+
T Consensus 75 iA~Dlr-GyG~Sd~P~~-~~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~~---lv 142 (322)
T KOG4178|consen 75 IAPDLR-GYGFSDAPPH-ISEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVDG---LV 142 (322)
T ss_pred EecCCC-CCCCCCCCCC-cceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcce---EE
Confidence 999999 9999986432 1334677788888888873 4467899999999999888888766553221 23
Q ss_pred eeeeeeccCccCChhhhh-----hhhhhhhhhcCCCCh
Q 018274 191 KLGGVALGDSWISPEDFV-----FSWGPLLKDMSRLDT 223 (358)
Q Consensus 191 nlkGi~iGng~i~p~~q~-----~~~~~~~~~~gli~~ 223 (358)
++.+... |+..+|.+.. .+|..+.++.....+
T Consensus 143 ~~nv~~~-~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E 179 (322)
T KOG4178|consen 143 TLNVPFP-NPKLKPLDSSKAIFGKSYYICLFQEPGKPE 179 (322)
T ss_pred EecCCCC-CcccchhhhhccccCccceeEeccccCcch
Confidence 4444444 7777776532 344444444433434
No 63
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.00 E-value=0.0056 Score=57.88 Aligned_cols=41 Identities=20% Similarity=0.192 Sum_probs=29.6
Q ss_pred CCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 156 QKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 156 ~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
...+++|+|+|+||..+-.+|.+- +-.+++++..+|+.++.
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~~---------p~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALKN---------PDRFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHhC---------cccceEEEEECCccCcc
Confidence 346899999999998766655431 12468888888887763
No 64
>PRK07581 hypothetical protein; Validated
Probab=96.98 E-value=0.0012 Score=63.93 Aligned_cols=83 Identities=14% Similarity=0.039 Sum_probs=48.8
Q ss_pred cccccccccCCcccccccccCCCCcccch-----HHHHHHHHHHHHHHHhhCcccCCCC-EEEEecccccchhhhhHHHH
Q 018274 106 KKADLLFVDNPVGTGYSYVEDNSSFVKND-----VEAANDLTTLLMELFNKNEILQKSP-LFIVAESYGGKFAATLGLAA 179 (358)
Q Consensus 106 ~~~~~l~iDqPvG~GfS~~~~~~~~~~~~-----~~~a~~~~~fl~~f~~~~p~~~~~~-~~i~GeSYgG~yvp~~a~~i 179 (358)
+.+.+|-+|.| |.|.|..........+. ...++++........+ ++.-.+ .+|+|+|+||..+-.+|.+-
T Consensus 70 ~~~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~lgi~~~~~lvG~S~GG~va~~~a~~~ 145 (339)
T PRK07581 70 EKYFIIIPNMF-GNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTE---KFGIERLALVVGWSMGAQQTYHWAVRY 145 (339)
T ss_pred CceEEEEecCC-CCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHH---HhCCCceEEEEEeCHHHHHHHHHHHHC
Confidence 56899999999 99998643211001111 1234444332222222 233456 57999999999988888765
Q ss_pred HHHHHhCcceeeeeeeeccCcc
Q 018274 180 VKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 180 ~~~~~~~~~~inlkGi~iGng~ 201 (358)
.+ .++++++.++.
T Consensus 146 P~---------~V~~Lvli~~~ 158 (339)
T PRK07581 146 PD---------MVERAAPIAGT 158 (339)
T ss_pred HH---------HHhhheeeecC
Confidence 44 35666665544
No 65
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.93 E-value=0.0058 Score=59.81 Aligned_cols=144 Identities=19% Similarity=0.251 Sum_probs=87.8
Q ss_pred eEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccc-ccccccccccCCc
Q 018274 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPV 117 (358)
Q Consensus 39 Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw-~~~~~~l~iDqPv 117 (358)
.=+...+...++.+.|.... . .+.+.+|+|||+|||--|-+.. ... .+. +--++ ....+.+- |
T Consensus 64 ~dv~~~~~~~l~vRly~P~~-~-~~~~~~p~lvyfHGGGf~~~S~--~~~---~y~-----~~~~~~a~~~~~vv----v 127 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTS-S-SSETKLPVLVYFHGGGFCLGSA--NSP---AYD-----SFCTRLAAELNCVV----V 127 (336)
T ss_pred eeeEecCCCCeEEEEEcCCC-C-CcccCceEEEEEeCCccEeCCC--CCc---hhH-----HHHHHHHHHcCeEE----E
Confidence 34455566889999997532 1 2213469999999998887641 000 000 00111 13334332 2
Q ss_pred ccccccccCCCCcccchHHHHHHHHHHHHH-HHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeee
Q 018274 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLME-LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA 196 (358)
Q Consensus 118 G~GfS~~~~~~~~~~~~~~~a~~~~~fl~~-f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~ 196 (358)
.++|--+ .+..++..-++.-..+..++++ |.+..-.. ++++|+|.|-||-.+-.+|.++.+.- ..++.++|++
T Consensus 128 SVdYRLA-PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~--~rv~l~GDSaGGNia~~va~r~~~~~---~~~~ki~g~i 201 (336)
T KOG1515|consen 128 SVDYRLA-PEHPFPAAYDDGWAALKWVLKNSWLKLGADP--SRVFLAGDSAGGNIAHVVAQRAADEK---LSKPKIKGQI 201 (336)
T ss_pred ecCcccC-CCCCCCccchHHHHHHHHHHHhHHHHhCCCc--ccEEEEccCccHHHHHHHHHHHhhcc---CCCcceEEEE
Confidence 3333332 2345677777776667777776 77654443 34999999999998888888776531 2367899999
Q ss_pred ccCccCCh
Q 018274 197 LGDSWISP 204 (358)
Q Consensus 197 iGng~i~p 204 (358)
+--|+...
T Consensus 202 li~P~~~~ 209 (336)
T KOG1515|consen 202 LIYPFFQG 209 (336)
T ss_pred EEecccCC
Confidence 96666543
No 66
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.80 E-value=0.0086 Score=59.39 Aligned_cols=126 Identities=16% Similarity=0.081 Sum_probs=74.4
Q ss_pred ceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhh----------hhccc-CCCcccCccCccccccccccccccC
Q 018274 47 AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIG----------NFEEV-GPFDTYLKPRNSTWLKKADLLFVDN 115 (358)
Q Consensus 47 ~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g----------~~~e~-GP~~~~~~~n~~sw~~~~~~l~iDq 115 (358)
.+++|+-+-.. ++ .+.|.||.+||-+|.+.. .. .+..+ ||- ..-..+.+.||-+|.
T Consensus 33 ~~~~y~~~G~~----~~-~~~p~vvl~HG~~~~~~~-~~~~~~~~~~~~~w~~~~~~~-------~~l~~~~~~vi~~Dl 99 (379)
T PRK00175 33 VELAYETYGTL----NA-DRSNAVLICHALTGDHHV-AGPHSPDDPKPGWWDNMVGPG-------KPIDTDRYFVICSNV 99 (379)
T ss_pred ceEEEEecccc----CC-CCCCEEEEeCCcCCchhh-cccccccCCCCcchhhccCCC-------CccCccceEEEeccC
Confidence 46776654311 12 224899999999998864 21 12110 110 000034678999999
Q ss_pred CcccccccccCC------CC-----cccchHHHHHHHHHHHHHHHhhCcccCCCC-EEEEecccccchhhhhHHHHHHHH
Q 018274 116 PVGTGYSYVEDN------SS-----FVKNDVEAANDLTTLLMELFNKNEILQKSP-LFIVAESYGGKFAATLGLAAVKAI 183 (358)
Q Consensus 116 PvG~GfS~~~~~------~~-----~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~-~~i~GeSYgG~yvp~~a~~i~~~~ 183 (358)
|-+.|.|..... .. ...+.++.++++..+++. +.-.+ .+|+|+|+||..+-.+|.+-.+
T Consensus 100 ~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------l~~~~~~~lvG~S~Gg~ia~~~a~~~p~-- 170 (379)
T PRK00175 100 LGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDA-------LGITRLAAVVGGSMGGMQALEWAIDYPD-- 170 (379)
T ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHH-------hCCCCceEEEEECHHHHHHHHHHHhChH--
Confidence 833455542110 00 134667777777777764 33346 5899999999887777765322
Q ss_pred HhCcceeeeeeeeccCcc
Q 018274 184 EAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 184 ~~~~~~inlkGi~iGng~ 201 (358)
.++++++.|+.
T Consensus 171 -------~v~~lvl~~~~ 181 (379)
T PRK00175 171 -------RVRSALVIASS 181 (379)
T ss_pred -------hhhEEEEECCC
Confidence 57888887754
No 67
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.71 E-value=0.02 Score=54.51 Aligned_cols=141 Identities=19% Similarity=0.253 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHhhcchhhhhcCCCCCCcceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhh
Q 018274 8 VATLLFLVSLLFNGGAAARALNKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNF 87 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~ 87 (358)
+++|.-|.++..+|+..++... .-.+-+-+.+++ ...-||+|.-. ..++ ..||+|.|||+-|..+- +-
T Consensus 11 ~~~l~~la~~~~~~sg~~~~a~----~~~~~~s~~~~g-~~r~y~l~vP~---g~~~-~apLvv~LHG~~~sgag-~~-- 78 (312)
T COG3509 11 VLLLAVLAVAAAACSGHAALAR----FGSSVASFDVNG-LKRSYRLYVPP---GLPS-GAPLVVVLHGSGGSGAG-QL-- 78 (312)
T ss_pred HHHHHHHHHhhcccchhhhhhh----ccCCccccccCC-CccceEEEcCC---CCCC-CCCEEEEEecCCCChHH-hh--
Confidence 4444444555556665443322 222223344444 35567888643 2343 34999999998887654 21
Q ss_pred cccCCCcccCccCccccccccc-----cccccC------CcccccccccCCCCcccchHHH--HHHHHHHHHHHHhhCcc
Q 018274 88 EEVGPFDTYLKPRNSTWLKKAD-----LLFVDN------PVGTGYSYVEDNSSFVKNDVEA--ANDLTTLLMELFNKNEI 154 (358)
Q Consensus 88 ~e~GP~~~~~~~n~~sw~~~~~-----~l~iDq------PvG~GfS~~~~~~~~~~~~~~~--a~~~~~fl~~f~~~~p~ 154 (358)
+-..|++.|. |+|-|+ |-+.|-++... ......+++ -.++.+-|..=|...
T Consensus 79 ------------~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~--~~~~g~ddVgflr~lva~l~~~~gid-- 142 (312)
T COG3509 79 ------------HGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPA--DRRRGVDDVGFLRALVAKLVNEYGID-- 142 (312)
T ss_pred ------------cccchhhhhcccCcEEECcCccccccCCCcccccCCcc--cccCCccHHHHHHHHHHHHHHhcCcC--
Confidence 3345555442 445441 22344443221 112222222 223333333322222
Q ss_pred cCCCCEEEEecccccchhhhhHHH
Q 018274 155 LQKSPLFIVAESYGGKFAATLGLA 178 (358)
Q Consensus 155 ~~~~~~~i~GeSYgG~yvp~~a~~ 178 (358)
...+||+|=|-||.++-.++..
T Consensus 143 --p~RVyvtGlS~GG~Ma~~lac~ 164 (312)
T COG3509 143 --PARVYVTGLSNGGRMANRLACE 164 (312)
T ss_pred --cceEEEEeeCcHHHHHHHHHhc
Confidence 3479999999999987777654
No 68
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.70 E-value=0.0048 Score=55.93 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=67.7
Q ss_pred EEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccc-ccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHH
Q 018274 69 IILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (358)
Q Consensus 69 lilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~-~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~ 147 (358)
.|+++++|=|.++. +--+. ....+ ..++..|+.| |-+ .......+.++.|++..+.|+.
T Consensus 2 ~lf~~p~~gG~~~~-y~~la-------------~~l~~~~~~v~~i~~~-~~~-----~~~~~~~si~~la~~y~~~I~~ 61 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLA-------------RALPDDVIGVYGIEYP-GRG-----DDEPPPDSIEELASRYAEAIRA 61 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHH-------------HHHTTTEEEEEEECST-TSC-----TTSHEESSHHHHHHHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHH-------------HhCCCCeEEEEEEecC-CCC-----CCCCCCCCHHHHHHHHHHHhhh
Confidence 58899998886655 32221 12222 3678889987 665 1223567889999977777764
Q ss_pred HHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 148 f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
..|+ .|++|+|+|+||..+=.+|.++.++ ....+.|+|-++.
T Consensus 62 ---~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~------G~~v~~l~liD~~ 103 (229)
T PF00975_consen 62 ---RQPE---GPYVLAGWSFGGILAFEMARQLEEA------GEEVSRLILIDSP 103 (229)
T ss_dssp ---HTSS---SSEEEEEETHHHHHHHHHHHHHHHT------T-SESEEEEESCS
T ss_pred ---hCCC---CCeeehccCccHHHHHHHHHHHHHh------hhccCceEEecCC
Confidence 3342 3999999999998877777666542 3467888886754
No 69
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=96.55 E-value=0.0042 Score=51.67 Aligned_cols=95 Identities=19% Similarity=0.273 Sum_probs=59.7
Q ss_pred EEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccc-ccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHH
Q 018274 69 IILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (358)
Q Consensus 69 lilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~-~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~ 147 (358)
+||++||+.|.... +..+.+ .+.+ .++++.+|.| |.|.+... ..++++++.+.
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~-------------~l~~~G~~v~~~~~~-~~~~~~~~----------~~~~~~~~~~~- 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAE-------------ALAEQGYAVVAFDYP-GHGDSDGA----------DAVERVLADIR- 54 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHH-------------HHHHTTEEEEEESCT-TSTTSHHS----------HHHHHHHHHHH-
T ss_pred CEEEECCCCCCHHH-HHHHHH-------------HHHHCCCEEEEEecC-CCCccchh----------HHHHHHHHHHH-
Confidence 58999999887655 433321 2333 3678888988 77766211 13333333332
Q ss_pred HHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 148 f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
+..+ ..++++|+|+|.||..+..++.+- -.++++++-+|+.+
T Consensus 55 --~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~----------~~v~~~v~~~~~~~ 96 (145)
T PF12695_consen 55 --AGYP--DPDRIILIGHSMGGAIAANLAARN----------PRVKAVVLLSPYPD 96 (145)
T ss_dssp --HHHC--TCCEEEEEEETHHHHHHHHHHHHS----------TTESEEEEESESSG
T ss_pred --hhcC--CCCcEEEEEEccCcHHHHHHhhhc----------cceeEEEEecCccc
Confidence 2222 457899999999999777666521 36888888777644
No 70
>PLN00021 chlorophyllase
Probab=96.44 E-value=0.0051 Score=59.65 Aligned_cols=111 Identities=17% Similarity=0.122 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccc-ccccccccCCcccccccccCCCCcccchHHHHHHHHHH
Q 018274 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~-~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~f 144 (358)
+.|+|||+||+.+.... +..+.+ .+.+ -+.++.+|.+ | ++... .. .+-+.+.++..+
T Consensus 51 ~~PvVv~lHG~~~~~~~-y~~l~~-------------~Las~G~~VvapD~~-g--~~~~~----~~-~~i~d~~~~~~~ 108 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSF-YSQLLQ-------------HIASHGFIVVAPQLY-T--LAGPD----GT-DEIKDAAAVINW 108 (313)
T ss_pred CCCEEEEECCCCCCccc-HHHHHH-------------HHHhCCCEEEEecCC-C--cCCCC----ch-hhHHHHHHHHHH
Confidence 45999999999776554 222210 1122 3567788866 4 22111 11 112224445555
Q ss_pred HHHHHhh-Cc---ccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccC
Q 018274 145 LMELFNK-NE---ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (358)
Q Consensus 145 l~~f~~~-~p---~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i 202 (358)
+..-++. -| +...++++|+|||+||+.+-.+|....+. .....+++++.-+++.
T Consensus 109 l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~----~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 109 LSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAV----SLPLKFSALIGLDPVD 166 (313)
T ss_pred HHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccc----ccccceeeEEeecccc
Confidence 5543322 11 22336799999999999877776543221 1234688888766653
No 71
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.33 E-value=0.011 Score=61.77 Aligned_cols=133 Identities=16% Similarity=0.107 Sum_probs=79.3
Q ss_pred EecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccc-ccccccccccCCcccc
Q 018274 42 EVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPVGTG 120 (358)
Q Consensus 42 ~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw-~~~~~~l~iDqPvG~G 120 (358)
+.+++..|+...|.-. .. +..|+||.+||-...+.. ...+ + .....-| .+-+.++-+|.+ |.|
T Consensus 2 ~~~DG~~L~~~~~~P~----~~-~~~P~Il~~~gyg~~~~~-~~~~-~--------~~~~~~l~~~Gy~vv~~D~R-G~g 65 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPA----GG-GPVPVILSRTPYGKDAGL-RWGL-D--------KTEPAWFVAQGYAVVIQDTR-GRG 65 (550)
T ss_pred cCCCCCEEEEEEEecC----CC-CCCCEEEEecCCCCchhh-cccc-c--------cccHHHHHhCCcEEEEEecc-ccc
Confidence 3445567777666521 11 246999999965433221 0000 0 0011122 346789999988 999
Q ss_pred cccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 121 YSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 121 fS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
.|..... ..+ ...++|+.++++ |+.+.|. .+.++.++|+||||...-.+|.. .+-.||+++..++
T Consensus 66 ~S~g~~~---~~~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---------~~~~l~aiv~~~~ 130 (550)
T TIGR00976 66 ASEGEFD---LLG-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---------QPPALRAIAPQEG 130 (550)
T ss_pred cCCCceE---ecC-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---------CCCceeEEeecCc
Confidence 9975421 111 446677777776 6655553 35689999999999765444431 1236899998888
Q ss_pred cCChh
Q 018274 201 WISPE 205 (358)
Q Consensus 201 ~i~p~ 205 (358)
+.|-.
T Consensus 131 ~~d~~ 135 (550)
T TIGR00976 131 VWDLY 135 (550)
T ss_pred ccchh
Confidence 77644
No 72
>PRK10115 protease 2; Provisional
Probab=96.27 E-value=0.0095 Score=63.83 Aligned_cols=121 Identities=15% Similarity=0.020 Sum_probs=68.0
Q ss_pred CCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccccc-ccccccCCcccccccccCCCCcccchHHHHHHHHHH
Q 018274 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKA-DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~-~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~f 144 (358)
..|+||+.|||||.+... +...+ --.|.+.- -+++..-.=|+||-..-........-....+|+...
T Consensus 444 ~~P~ll~~hGg~~~~~~p-~f~~~-----------~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~ 511 (686)
T PRK10115 444 HNPLLVYGYGSYGASIDA-DFSFS-----------RLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDA 511 (686)
T ss_pred CCCEEEEEECCCCCCCCC-CccHH-----------HHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHH
Confidence 359999999999999652 22111 12344432 333334343444443211110111111345566666
Q ss_pred HHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhhh
Q 018274 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFV 208 (358)
Q Consensus 145 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q~ 208 (358)
.+... ..+--...++.|.|-||||..+-..+..- +=.+++++.+.|++|....+
T Consensus 512 ~~~Lv-~~g~~d~~rl~i~G~S~GG~l~~~~~~~~---------Pdlf~A~v~~vp~~D~~~~~ 565 (686)
T PRK10115 512 CDALL-KLGYGSPSLCYGMGGSAGGMLMGVAINQR---------PELFHGVIAQVPFVDVVTTM 565 (686)
T ss_pred HHHHH-HcCCCChHHeEEEEECHHHHHHHHHHhcC---------hhheeEEEecCCchhHhhhc
Confidence 65433 33323356899999999998654443221 22589999999999988664
No 73
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=96.19 E-value=0.034 Score=54.35 Aligned_cols=128 Identities=14% Similarity=0.114 Sum_probs=73.1
Q ss_pred CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhh-h------hhhccc-CCCcccCccCccccccccccccccCCc
Q 018274 46 KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVG-I------GNFEEV-GPFDTYLKPRNSTWLKKADLLFVDNPV 117 (358)
Q Consensus 46 ~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~-~------g~~~e~-GP~~~~~~~n~~sw~~~~~~l~iDqPv 117 (358)
+.+++|.-+... +. ...|.||++||=+|.+-.. + |.+... || ...--.+.+.|+-+|.|
T Consensus 15 ~~~~~y~~~g~~----~~-~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~-------~~~l~~~~~~vi~~D~~- 81 (351)
T TIGR01392 15 DVRVAYETYGTL----NA-ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGP-------GRAIDTDRYFVVCSNVL- 81 (351)
T ss_pred CceEEEEecccc----CC-CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCC-------CCCcCCCceEEEEecCC-
Confidence 356777655421 11 1237899999888765320 0 111100 10 01111356799999999
Q ss_pred c--cccccccC--CC-------CcccchHHHHHHHHHHHHHHHhhCcccCCCC-EEEEecccccchhhhhHHHHHHHHHh
Q 018274 118 G--TGYSYVED--NS-------SFVKNDVEAANDLTTLLMELFNKNEILQKSP-LFIVAESYGGKFAATLGLAAVKAIEA 185 (358)
Q Consensus 118 G--~GfS~~~~--~~-------~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~-~~i~GeSYgG~yvp~~a~~i~~~~~~ 185 (358)
| .|-|-..+ +. ....+.++.++++..+++. +.-.+ ++|+|+|+||..+-.+|..-.
T Consensus 82 G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~l~G~S~Gg~ia~~~a~~~p----- 149 (351)
T TIGR01392 82 GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH-------LGIEQIAAVVGGSMGGMQALEWAIDYP----- 149 (351)
T ss_pred CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH-------cCCCCceEEEEECHHHHHHHHHHHHCh-----
Confidence 7 45443211 00 1134567777777777764 23345 999999999987777765432
Q ss_pred CcceeeeeeeeccCccC
Q 018274 186 GKLKLKLGGVALGDSWI 202 (358)
Q Consensus 186 ~~~~inlkGi~iGng~i 202 (358)
-.++++++.++..
T Consensus 150 ----~~v~~lvl~~~~~ 162 (351)
T TIGR01392 150 ----ERVRAIVVLATSA 162 (351)
T ss_pred ----HhhheEEEEccCC
Confidence 2578888866543
No 74
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=95.98 E-value=0.014 Score=53.42 Aligned_cols=108 Identities=21% Similarity=0.286 Sum_probs=72.1
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
+|++|.+||--|-- |-+.- ..+-.=-+-..||+-+|-. |.|.|.+...+.-...|.+++-
T Consensus 78 ~pTlLyfh~NAGNm----Ghr~~--------i~~~fy~~l~mnv~ivsYR-GYG~S~GspsE~GL~lDs~avl------- 137 (300)
T KOG4391|consen 78 RPTLLYFHANAGNM----GHRLP--------IARVFYVNLKMNVLIVSYR-GYGKSEGSPSEEGLKLDSEAVL------- 137 (300)
T ss_pred CceEEEEccCCCcc----cchhh--------HHHHHHHHcCceEEEEEee-ccccCCCCccccceeccHHHHH-------
Confidence 49999999876543 22210 0000111335689999988 9999987633222223333332
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
.++..+|...++++.++|.|-||.-+-.+|.+-.+ .+.++++-|-+++
T Consensus 138 dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~---------ri~~~ivENTF~S 185 (300)
T KOG4391|consen 138 DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD---------RISAIIVENTFLS 185 (300)
T ss_pred HHHhcCccCCcceEEEEecccCCeeEEEeeccchh---------heeeeeeechhcc
Confidence 34557888889999999999999888887765322 6889999998877
No 75
>PRK10162 acetyl esterase; Provisional
Probab=95.93 E-value=0.011 Score=57.14 Aligned_cols=45 Identities=20% Similarity=0.012 Sum_probs=32.7
Q ss_pred CCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 157 ~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
.+++.|+|+|.||+.+..++..+.+. +.....++|+++..|+++.
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~---~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDK---QIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhc---CCCccChhheEEECCccCC
Confidence 35799999999999988887655332 1112467889988888774
No 76
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.92 E-value=0.0031 Score=56.83 Aligned_cols=94 Identities=13% Similarity=0.097 Sum_probs=61.3
Q ss_pred cccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHh
Q 018274 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (358)
Q Consensus 106 ~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~ 185 (358)
+-+.++.+|.+.+.||+..-........-....+|+.+.++..-++ +.....++.|+|.||||+.+-.++..-
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~-~~iD~~ri~i~G~S~GG~~a~~~~~~~------ 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQ-YYIDPDRIGIMGHSYGGYLALLAATQH------ 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHT-TSEEEEEEEEEEETHHHHHHHHHHHHT------
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcc-ccccceeEEEEcccccccccchhhccc------
Confidence 5568899999977777764222222333455677788888755444 344456899999999999876665421
Q ss_pred CcceeeeeeeeccCccCChhhhhh
Q 018274 186 GKLKLKLGGVALGDSWISPEDFVF 209 (358)
Q Consensus 186 ~~~~inlkGi~iGng~i~p~~q~~ 209 (358)
+-.++.++.++|.+|+.....
T Consensus 86 ---~~~f~a~v~~~g~~d~~~~~~ 106 (213)
T PF00326_consen 86 ---PDRFKAAVAGAGVSDLFSYYG 106 (213)
T ss_dssp ---CCGSSEEEEESE-SSTTCSBH
T ss_pred ---ceeeeeeeccceecchhcccc
Confidence 225789999999999866543
No 77
>PLN02872 triacylglycerol lipase
Probab=95.87 E-value=0.064 Score=53.76 Aligned_cols=125 Identities=18% Similarity=0.092 Sum_probs=71.1
Q ss_pred CcceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccc-cccccccc
Q 018274 34 ASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLF 112 (358)
Q Consensus 34 ~~~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw-~~~~~~l~ 112 (358)
+..+.-+|+..++-.+-.+-+........+ ..+|.|+.+||..+++..+. -++|-+. -.+-+ .+-++++-
T Consensus 42 y~~e~h~v~T~DGy~L~l~ri~~~~~~~~~-~~~~~Vll~HGl~~ss~~w~----~~~~~~s----la~~La~~GydV~l 112 (395)
T PLN02872 42 YSCTEHTIQTKDGYLLALQRVSSRNPRLGS-QRGPPVLLQHGLFMAGDAWF----LNSPEQS----LGFILADHGFDVWV 112 (395)
T ss_pred CCceEEEEECCCCcEEEEEEcCCCCCCCCC-CCCCeEEEeCccccccccee----ecCcccc----hHHHHHhCCCCccc
Confidence 444455676655544444444321110111 23589999999988877631 1122110 00112 23467888
Q ss_pred ccCCcccccccccC-----CCCc-ccchHHHH-HHHHHHHHHHHhhCcccCCCCEEEEecccccchh
Q 018274 113 VDNPVGTGYSYVED-----NSSF-VKNDVEAA-NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFA 172 (358)
Q Consensus 113 iDqPvG~GfS~~~~-----~~~~-~~~~~~~a-~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yv 172 (358)
.|.+ |.|+|+... +..+ ..+-++.| .|+-++++...+.. .++++++|+|.||..+
T Consensus 113 ~n~R-G~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~ 174 (395)
T PLN02872 113 GNVR-GTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMS 174 (395)
T ss_pred cccc-ccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHH
Confidence 8988 999886421 1111 23455566 68888887766432 3589999999999654
No 78
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.85 E-value=0.027 Score=53.29 Aligned_cols=114 Identities=19% Similarity=0.295 Sum_probs=72.0
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCC-----CCcccchHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN-----SSFVKNDVEAANDL 141 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~-----~~~~~~~~~~a~~~ 141 (358)
+++++|+-|-||.... +--|.+ .+.. ..+..+.++=+.. .|+|..... +.-.-+.+++.+.-
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~------~L~~---~l~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~sL~~QI~hk 68 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS------ALYE---KLNPQFEILGISH---AGHSTSPSNSKFSPNGRLFSLQDQIEHK 68 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH------HHHH---hCCCCCeeEEecC---CCCcCCcccccccCCCCccCHHHHHHHH
Confidence 3799999999999987 544431 0110 1144555554553 345544322 23466889999999
Q ss_pred HHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 142 ~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
.+|++++....+ ..+.+++|.|||-|.. ++.+++++.. ....+++++++-=|
T Consensus 69 ~~~i~~~~~~~~-~~~~~liLiGHSIGay----i~levl~r~~--~~~~~V~~~~lLfP 120 (266)
T PF10230_consen 69 IDFIKELIPQKN-KPNVKLILIGHSIGAY----IALEVLKRLP--DLKFRVKKVILLFP 120 (266)
T ss_pred HHHHHHHhhhhc-CCCCcEEEEeCcHHHH----HHHHHHHhcc--ccCCceeEEEEeCC
Confidence 999999887654 2367899999999975 4555555433 12356666665333
No 79
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=95.76 E-value=0.034 Score=51.28 Aligned_cols=39 Identities=23% Similarity=0.267 Sum_probs=28.7
Q ss_pred ccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 154 ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 154 ~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
....+++|++|.|-||.....++....+ -+.++++..|.
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd---------~faa~a~~sG~ 131 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD---------LFAAVAVVSGV 131 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc---------cceEEEeeccc
Confidence 3446789999999999887777654332 57788877765
No 80
>PRK11071 esterase YqiA; Provisional
Probab=95.75 E-value=0.016 Score=51.84 Aligned_cols=94 Identities=20% Similarity=0.250 Sum_probs=55.0
Q ss_pred CEEEEEcCCCChhhhhhh-hhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIG-NFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g-~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
|.||+|||-+|++..+-. .+.+ + +. .-...++++.+|-| |.| ++.++++ .
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~---~---l~----~~~~~~~v~~~dl~-g~~--------------~~~~~~l----~ 52 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKN---W---LA----QHHPDIEMIVPQLP-PYP--------------ADAAELL----E 52 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHH---H---HH----HhCCCCeEEeCCCC-CCH--------------HHHHHHH----H
Confidence 789999998887775311 1110 0 00 00013567888888 432 2344444 4
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
++.+. +..++++|+|+|.||.++-.+|... + .+ +++-|+-.+|.
T Consensus 53 ~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~---------~--~~-~vl~~~~~~~~ 96 (190)
T PRK11071 53 SLVLE---HGGDPLGLVGSSLGGYYATWLSQCF---------M--LP-AVVVNPAVRPF 96 (190)
T ss_pred HHHHH---cCCCCeEEEEECHHHHHHHHHHHHc---------C--CC-EEEECCCCCHH
Confidence 44433 3346899999999999887776542 1 23 35567777764
No 81
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.71 E-value=0.033 Score=54.39 Aligned_cols=94 Identities=23% Similarity=0.290 Sum_probs=54.9
Q ss_pred CCCEEEEEcC-CCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHH
Q 018274 66 PWPIILWLQG-GPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (358)
Q Consensus 66 ~~Plilwl~G-GPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~f 144 (358)
++|-||.+|| |-++.+ |.++ -.+.++....-++=||-| |-|+|-..+. ... =.+.+....
T Consensus 57 ~~~pvlllHGF~~~~~~-----w~~~--------~~~L~~~~~~~v~aiDl~-G~g~~s~~~~-~~~----y~~~~~v~~ 117 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFS-----WRRV--------VPLLSKAKGLRVLAIDLP-GHGYSSPLPR-GPL----YTLRELVEL 117 (326)
T ss_pred CCCcEEEeccccCCccc-----Hhhh--------ccccccccceEEEEEecC-CCCcCCCCCC-CCc----eehhHHHHH
Confidence 4588999997 333332 2211 122333334668889999 8885433222 122 233344445
Q ss_pred HHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHH
Q 018274 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (358)
Q Consensus 145 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 181 (358)
++.|+. ++...+++|+|+||||..+=.+|....+
T Consensus 118 i~~~~~---~~~~~~~~lvghS~Gg~va~~~Aa~~P~ 151 (326)
T KOG1454|consen 118 IRRFVK---EVFVEPVSLVGHSLGGIVALKAAAYYPE 151 (326)
T ss_pred HHHHHH---hhcCcceEEEEeCcHHHHHHHHHHhCcc
Confidence 555554 4446689999999999988777766433
No 82
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=95.16 E-value=0.047 Score=55.79 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=21.8
Q ss_pred HHHHHHHHhhCcccCCCCEEEEecccccchhhhhH
Q 018274 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (358)
Q Consensus 142 ~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a 176 (358)
++++++-.+.|.- ..+++.|+|+|.||+-+-.++
T Consensus 161 l~wv~~~i~~fgg-d~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 161 LKWVQDNIAAFGG-DPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHhCC-CcceEEEEeecHHHHHhhhHh
Confidence 3455554444432 345899999999998665443
No 83
>PRK11460 putative hydrolase; Provisional
Probab=94.98 E-value=0.074 Score=49.07 Aligned_cols=37 Identities=11% Similarity=-0.032 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHH
Q 018274 140 DLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (358)
Q Consensus 140 ~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~ 177 (358)
.+.++++.+.++. ....++++|+|.|.||..+-.++.
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHH
Confidence 3444444433332 233568999999999988765543
No 84
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.90 E-value=0.041 Score=59.62 Aligned_cols=148 Identities=20% Similarity=0.214 Sum_probs=75.8
Q ss_pred ceeeEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccc-ccccccccc
Q 018274 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVD 114 (358)
Q Consensus 36 ~~~Gy~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~-~~~~~l~iD 114 (358)
.+.+-+.+ .+-...+++...+ .-++.+.-|++++..||||+-+. .+.|. +..+...+. ..+=++.||
T Consensus 498 ~~~~~i~~-~~~~~~~~~~lP~--~~~~~~kyPllv~~yGGP~sq~v-~~~~~--------~~~~~~~~s~~g~~v~~vd 565 (755)
T KOG2100|consen 498 VEFGKIEI-DGITANAILILPP--NFDPSKKYPLLVVVYGGPGSQSV-TSKFS--------VDWNEVVVSSRGFAVLQVD 565 (755)
T ss_pred ceeEEEEe-ccEEEEEEEecCC--CCCCCCCCCEEEEecCCCCccee-eeeEE--------ecHHHHhhccCCeEEEEEc
Confidence 34455555 3345556665432 23455667999999999994444 23331 111222222 123567788
Q ss_pred CCcccccccccCCCCcccch-HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeee
Q 018274 115 NPVGTGYSYVEDNSSFVKND-VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (358)
Q Consensus 115 qPvG~GfS~~~~~~~~~~~~-~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlk 193 (358)
-. |+|+.-..-........ ..-.+|.....+.+.+.+ ..-..++.|+|-||||-.... ++.. + ..--+|
T Consensus 566 ~R-Gs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~t~~----~l~~---~-~~~~fk 635 (755)
T KOG2100|consen 566 GR-GSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYLTLK----LLES---D-PGDVFK 635 (755)
T ss_pred CC-CcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcc-cccHHHeEEeccChHHHHHHH----Hhhh---C-cCceEE
Confidence 44 77755322000011111 012345555666555554 334567999999999965433 3321 1 112355
Q ss_pred eeeccCccCChh
Q 018274 194 GVALGDSWISPE 205 (358)
Q Consensus 194 Gi~iGng~i~p~ 205 (358)
.-+--+|.+|-.
T Consensus 636 cgvavaPVtd~~ 647 (755)
T KOG2100|consen 636 CGVAVAPVTDWL 647 (755)
T ss_pred EEEEecceeeee
Confidence 545547776644
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=94.82 E-value=0.014 Score=58.46 Aligned_cols=80 Identities=19% Similarity=0.256 Sum_probs=50.6
Q ss_pred cccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHh
Q 018274 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (358)
Q Consensus 106 ~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~ 185 (358)
.-..||=+|-| |+|+|.... ...+. ..++..+..|+...|+....++.++|-|.||.|++.+|..=
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l~~D~----~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le------ 282 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---LTQDS----SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE------ 282 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S-S-C----CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT------
T ss_pred CCCEEEEEccC-CCcccccCC---CCcCH----HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc------
Confidence 44579999999 999985321 11122 23555556667778988888999999999999999988631
Q ss_pred CcceeeeeeeeccCccC
Q 018274 186 GKLKLKLGGVALGDSWI 202 (358)
Q Consensus 186 ~~~~inlkGi~iGng~i 202 (358)
.-.|||++--.|.+
T Consensus 283 ---~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 283 ---DPRLKAVVALGAPV 296 (411)
T ss_dssp ---TTT-SEEEEES---
T ss_pred ---ccceeeEeeeCchH
Confidence 12578876544433
No 86
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=94.54 E-value=0.1 Score=56.39 Aligned_cols=99 Identities=19% Similarity=0.327 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccc-cccccccccCCccccccccc-C--------CC--Ccc-
Q 018274 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYVE-D--------NS--SFV- 131 (358)
Q Consensus 65 ~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~-~~~~~l~iDqPvG~GfS~~~-~--------~~--~~~- 131 (358)
..+|+|+++||=.|....+ -.+. ..+. +.+.++-+|.| |.|-|... + .. .|.
T Consensus 447 ~g~P~VVllHG~~g~~~~~-~~lA-------------~~La~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y~N 511 (792)
T TIGR03502 447 DGWPVVIYQHGITGAKENA-LAFA-------------GTLAAAGVATIAIDHP-LHGARSFDANASGVNATNANVLAYMN 511 (792)
T ss_pred CCCcEEEEeCCCCCCHHHH-HHHH-------------HHHHhCCcEEEEeCCC-CCCccccccccccccccccCccceec
Confidence 3458999999977776652 1121 1122 34678889998 99988322 1 11 111
Q ss_pred --------cchHHHHHHHHHHHHHHH------h---hCcccCCCCEEEEecccccchhhhhHHH
Q 018274 132 --------KNDVEAANDLTTLLMELF------N---KNEILQKSPLFIVAESYGGKFAATLGLA 178 (358)
Q Consensus 132 --------~~~~~~a~~~~~fl~~f~------~---~~p~~~~~~~~i~GeSYgG~yvp~~a~~ 178 (358)
.+.++.+.|++......- . ....+...|++++|||.||..+..++..
T Consensus 512 l~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 512 LASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 256788888776655432 1 1233556799999999999998887753
No 87
>PRK13604 luxD acyl transferase; Provisional
Probab=94.50 E-value=0.26 Score=47.65 Aligned_cols=132 Identities=14% Similarity=0.070 Sum_probs=75.4
Q ss_pred EEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCccc
Q 018274 40 YVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGT 119 (358)
Q Consensus 40 y~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~ 119 (358)
-|.++++..|.=|+....+ +++ ..+|++|..|| .|+....+..| -.+=+.+-+++|-.|..-|.
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~--~~~-~~~~~vIi~HG-f~~~~~~~~~~------------A~~La~~G~~vLrfD~rg~~ 76 (307)
T PRK13604 13 VICLENGQSIRVWETLPKE--NSP-KKNNTILIASG-FARRMDHFAGL------------AEYLSSNGFHVIRYDSLHHV 76 (307)
T ss_pred eEEcCCCCEEEEEEEcCcc--cCC-CCCCEEEEeCC-CCCChHHHHHH------------HHHHHHCCCEEEEecCCCCC
Confidence 4555666778888776422 122 23488888774 55542212111 23455677899999976456
Q ss_pred ccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccC
Q 018274 120 GYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD 199 (358)
Q Consensus 120 GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGn 199 (358)
|-|-+.-. ....+. ...|+...++ |++.. ...++.|.|+|.||-.+...|. ..+++++++..
T Consensus 77 GeS~G~~~-~~t~s~--g~~Dl~aaid-~lk~~---~~~~I~LiG~SmGgava~~~A~-----------~~~v~~lI~~s 138 (307)
T PRK13604 77 GLSSGTID-EFTMSI--GKNSLLTVVD-WLNTR---GINNLGLIAASLSARIAYEVIN-----------EIDLSFLITAV 138 (307)
T ss_pred CCCCCccc-cCcccc--cHHHHHHHHH-HHHhc---CCCceEEEEECHHHHHHHHHhc-----------CCCCCEEEEcC
Confidence 88854321 111111 2345533332 33332 2357999999999976422221 12588999999
Q ss_pred ccCChh
Q 018274 200 SWISPE 205 (358)
Q Consensus 200 g~i~p~ 205 (358)
|+.+-.
T Consensus 139 p~~~l~ 144 (307)
T PRK13604 139 GVVNLR 144 (307)
T ss_pred CcccHH
Confidence 988843
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=94.13 E-value=0.047 Score=49.52 Aligned_cols=60 Identities=28% Similarity=0.352 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
++.++.+.+++....+.. ...++++|.|-|-||..+-.++.. .+-.+.|++.-+|++-+.
T Consensus 84 ~~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~---------~p~~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 84 EESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALR---------YPEPLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHC---------TSSTSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHH---------cCcCcCEEEEeecccccc
Confidence 334444555555544332 345689999999999776555532 123788999888887543
No 89
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=94.05 E-value=0.16 Score=51.28 Aligned_cols=125 Identities=16% Similarity=0.162 Sum_probs=68.6
Q ss_pred ccccccccCCcccccccccC----CCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHH
Q 018274 107 KADLLFVDNPVGTGYSYVED----NSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKA 182 (358)
Q Consensus 107 ~~~~l~iDqPvG~GfS~~~~----~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~ 182 (358)
.+-|++++.+ --|-|.... +..-.-+.+++-+|+..|++.+=.++....+.|+.++|-||||..+.-+-.+-.
T Consensus 59 ~a~~v~lEHR-yYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP-- 135 (434)
T PF05577_consen 59 GALVVALEHR-YYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP-- 135 (434)
T ss_dssp TEEEEEE--T-TSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T--
T ss_pred CCcEEEeehh-hhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC--
Confidence 4568888988 888887532 222346889999999999998776676666789999999999976544433221
Q ss_pred HHhCcceeeeeeeeccCccCChhhhhhhhhhhhh-hcCCCChhhHHHHHHHHHHHHHHHH
Q 018274 183 IEAGKLKLKLGGVALGDSWISPEDFVFSWGPLLK-DMSRLDTNGFAKSNQIAQKIKQQLE 241 (358)
Q Consensus 183 ~~~~~~~inlkGi~iGng~i~p~~q~~~~~~~~~-~~gli~~~~~~~~~~~~~~~~~~i~ 241 (358)
--+.|.+--+|.+........|-+... .......+-...+++..+.+.+.++
T Consensus 136 -------~~~~ga~ASSapv~a~~df~~y~~~v~~~~~~~~~~C~~~i~~a~~~i~~~~~ 188 (434)
T PF05577_consen 136 -------HLFDGAWASSAPVQAKVDFWEYFEVVTESLRKYGPNCYDAIRAAFDQIDKLLK 188 (434)
T ss_dssp -------TT-SEEEEET--CCHCCTTTHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHCC
T ss_pred -------CeeEEEEeccceeeeecccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhh
Confidence 124555555666655443333333221 1122222333445555555554443
No 90
>COG4099 Predicted peptidase [General function prediction only]
Probab=93.98 E-value=0.5 Score=45.41 Aligned_cols=149 Identities=23% Similarity=0.281 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhhcchhhhhcCCCCCCc---ceeeEEEe-----cCCceEEEEEEEcCCCCCCCCCCC-CEEEEEcCCCCh
Q 018274 9 ATLLFLVSLLFNGGAAARALNKNQDAS---EEWGYVEV-----RPKAHMFWWLYKSPYRIENPSKPW-PIILWLQGGPGA 79 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Gy~~v-----~~~~~~f~~~~~~~~~~~~~~~~~-Plilwl~GGPG~ 79 (358)
++++...+.++|+++.....-+..... ....|..+ ..+.++-|-+|.-.. -+|.++. ||+|||||+--.
T Consensus 126 ~~~lrgpl~ltag~~l~p~~~Ka~~~~enla~ddF~a~~f~d~~tgneLkYrly~Pkd--y~pdkky~PLvlfLHgagq~ 203 (387)
T COG4099 126 ATMLRGPLPLTAGAALGPFDPKAANYAENLALDDFQAVEFYDESTGNELKYRLYTPKD--YAPDKKYYPLVLFLHGAGQG 203 (387)
T ss_pred HHHhcccceecccccccCCCccccchhhceeeechhheEeeccccCceeeEEEecccc--cCCCCccccEEEEEecCCCC
Confidence 344445566777765543333333211 11122223 234788888886422 2444555 999999985433
Q ss_pred hhh-------hhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhC
Q 018274 80 SGV-------GIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKN 152 (358)
Q Consensus 80 ss~-------~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~ 152 (358)
++- +.|...+.||-.- .||=.|= |+-.-++++. ..+.--....+.+..-+..+
T Consensus 204 g~dn~~~l~sg~gaiawa~pedq---------------cfVlAPQ---y~~if~d~e~--~t~~~l~~~idli~~vlas~ 263 (387)
T COG4099 204 GSDNDKVLSSGIGAIAWAGPEDQ---------------CFVLAPQ---YNPIFADSEE--KTLLYLIEKIDLILEVLAST 263 (387)
T ss_pred CchhhhhhhcCccceeeecccCc---------------eEEEccc---cccccccccc--ccchhHHHHHHHHHHHHhhc
Confidence 221 2344444444211 2222231 1110000000 11111122334444444456
Q ss_pred cccCCCCEEEEecccccchhhhhHHHH
Q 018274 153 EILQKSPLFIVAESYGGKFAATLGLAA 179 (358)
Q Consensus 153 p~~~~~~~~i~GeSYgG~yvp~~a~~i 179 (358)
+.-..+++|+.|-|-||.-.=+++.+.
T Consensus 264 ynID~sRIYviGlSrG~~gt~al~~kf 290 (387)
T COG4099 264 YNIDRSRIYVIGLSRGGFGTWALAEKF 290 (387)
T ss_pred cCcccceEEEEeecCcchhhHHHHHhC
Confidence 666678999999999998665555443
No 91
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=93.47 E-value=0.032 Score=54.58 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=47.9
Q ss_pred cccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHH
Q 018274 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (358)
Q Consensus 106 ~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 181 (358)
...|||.||.-.+..-.|.. ...+...+++.+..||+...... .....++||+|+|.|+|.+-..+.++..
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 47899999976666555432 24567778888888887666332 2234689999999999998888777643
No 92
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=93.43 E-value=0.16 Score=45.37 Aligned_cols=64 Identities=23% Similarity=0.347 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHhhC--cccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 136 EAANDLTTLLMELFNKN--EILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 136 ~~a~~~~~fl~~f~~~~--p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
+..+|+.++++...+.- -.+..++++|+|+|-||+.+..++..+.+. + ...++++++..|++|.
T Consensus 47 ~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~---~--~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 47 AALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR---G--LPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT---T--TCHESEEEEESCHSST
T ss_pred ccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh---c--ccchhhhhcccccccc
Confidence 34445555554333320 123356899999999999998888766542 1 1248999999998765
No 93
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.22 E-value=0.26 Score=46.22 Aligned_cols=109 Identities=17% Similarity=0.211 Sum_probs=69.0
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
.+++|+.||--.--+.-..+|. +.+-.=+.|+.=.|-- |.|.|.+...+ .+.-+-.+..+++|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~------------~l~~~ln~nv~~~DYS-GyG~S~G~psE---~n~y~Di~avye~Lr 123 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFK------------ELSIFLNCNVVSYDYS-GYGRSSGKPSE---RNLYADIKAVYEWLR 123 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHH------------HHhhcccceEEEEecc-cccccCCCccc---ccchhhHHHHHHHHH
Confidence 5899999986211111022332 2333345688888977 99999876432 245555555667777
Q ss_pred HHHhhCccc-CCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhhh
Q 018274 147 ELFNKNEIL-QKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFV 208 (358)
Q Consensus 147 ~f~~~~p~~-~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q~ 208 (358)
+ .+ +..++.|+|.|-|..-.-.+|.+ ..+.|+++-+|+++-...+
T Consensus 124 ~------~~g~~~~Iil~G~SiGt~~tv~Lasr-----------~~~~alVL~SPf~S~~rv~ 169 (258)
T KOG1552|consen 124 N------RYGSPERIILYGQSIGTVPTVDLASR-----------YPLAAVVLHSPFTSGMRVA 169 (258)
T ss_pred h------hcCCCceEEEEEecCCchhhhhHhhc-----------CCcceEEEeccchhhhhhh
Confidence 5 33 46799999999997532222221 1399999999998865443
No 94
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=92.55 E-value=0.47 Score=47.47 Aligned_cols=114 Identities=22% Similarity=0.255 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHH
Q 018274 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (358)
Q Consensus 65 ~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~f 144 (358)
.++|++|.++|=+|.|... .... +. ...-.+-.+++-..+. |.|-|-.+++.-+.-... +|+-++
T Consensus 123 ~~~P~vvilpGltg~S~~~-YVr~--------lv--~~a~~~G~r~VVfN~R-G~~g~~LtTpr~f~ag~t---~Dl~~~ 187 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHES-YVRH--------LV--HEAQRKGYRVVVFNHR-GLGGSKLTTPRLFTAGWT---EDLREV 187 (409)
T ss_pred CCCcEEEEecCCCCCChhH-HHHH--------HH--HHHHhCCcEEEEECCC-CCCCCccCCCceeecCCH---HHHHHH
Confidence 3569999999999988652 1110 00 0011111334444434 988887766654433333 234444
Q ss_pred HHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccC
Q 018274 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (358)
Q Consensus 145 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i 202 (358)
++.--++|| +.|++.+|.|+||..+ .+++-+. ++..-=..|++|-|||-
T Consensus 188 v~~i~~~~P---~a~l~avG~S~Gg~iL---~nYLGE~---g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 188 VNHIKKRYP---QAPLFAVGFSMGGNIL---TNYLGEE---GDNTPLIAAVAVCNPWD 236 (409)
T ss_pred HHHHHHhCC---CCceEEEEecchHHHH---HHHhhhc---cCCCCceeEEEEeccch
Confidence 444444677 4699999999999754 4454442 22122367888988884
No 95
>PLN02454 triacylglycerol lipase
Probab=92.30 E-value=0.32 Score=48.82 Aligned_cols=70 Identities=14% Similarity=0.241 Sum_probs=50.7
Q ss_pred chHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
+...+.+++...+++..+++|.+ +..++|+|||.||-.+-..|..|.+.... ...++++.+..|.|-+.-
T Consensus 204 ~~~S~r~qvl~~V~~l~~~Yp~~-~~sI~vTGHSLGGALAtLaA~di~~~g~~-~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 204 TKLSARSQLLAKIKELLERYKDE-KLSIVLTGHSLGASLATLAAFDIVENGVS-GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCC-CceEEEEecCHHHHHHHHHHHHHHHhccc-ccCCceEEEEeCCCcccC
Confidence 34567788999999998888865 23599999999998887777776542111 124567788888887764
No 96
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=91.93 E-value=0.55 Score=53.64 Aligned_cols=101 Identities=13% Similarity=0.142 Sum_probs=66.2
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~ 147 (358)
|.++.+||++|.+.. +..+. ........++-+|.| |.|-+. ....+.++.|+++...++.
T Consensus 1069 ~~l~~lh~~~g~~~~-~~~l~-------------~~l~~~~~v~~~~~~-g~~~~~-----~~~~~l~~la~~~~~~i~~ 1128 (1296)
T PRK10252 1069 PTLFCFHPASGFAWQ-FSVLS-------------RYLDPQWSIYGIQSP-RPDGPM-----QTATSLDEVCEAHLATLLE 1128 (1296)
T ss_pred CCeEEecCCCCchHH-HHHHH-------------HhcCCCCcEEEEECC-CCCCCC-----CCCCCHHHHHHHHHHHHHh
Confidence 568899999987766 32222 122334677888988 776442 2245788888888777764
Q ss_pred HHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 148 f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
. .| ..|++|+|+|+||..+-.+|.++.++ ...+..+++-++
T Consensus 1129 ~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~------~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1129 Q---QP---HGPYHLLGYSLGGTLAQGIAARLRAR------GEEVAFLGLLDT 1169 (1296)
T ss_pred h---CC---CCCEEEEEechhhHHHHHHHHHHHHc------CCceeEEEEecC
Confidence 2 22 35899999999999888877765432 224556665444
No 97
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=91.67 E-value=0.29 Score=40.70 Aligned_cols=63 Identities=16% Similarity=0.194 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 136 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
...+.+.+.|++..+++| +.++.|+|||-||-.+..+|..+.+.... ...+++-+..|.|-+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~--~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS--SSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT--STTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc--cccceeeeecCCcccc
Confidence 455566777777777777 45899999999999988888877653221 1356777888777663
No 98
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=91.63 E-value=0.44 Score=42.76 Aligned_cols=59 Identities=22% Similarity=0.270 Sum_probs=39.7
Q ss_pred cchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhhhh
Q 018274 132 KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFVF 209 (358)
Q Consensus 132 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q~~ 209 (358)
...+++.+.+...++ +.....+.|+|.|.||.|+-.+|.+. +++. +|.||.+.|...+.
T Consensus 40 ~~p~~a~~~l~~~i~-------~~~~~~~~liGSSlGG~~A~~La~~~-----------~~~a-vLiNPav~p~~~l~ 98 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIE-------ELKPENVVLIGSSLGGFYATYLAERY-----------GLPA-VLINPAVRPYELLQ 98 (187)
T ss_pred cCHHHHHHHHHHHHH-------hCCCCCeEEEEEChHHHHHHHHHHHh-----------CCCE-EEEcCCCCHHHHHH
Confidence 344455554444444 23344599999999999988887643 5666 56699999976554
No 99
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.06 E-value=0.54 Score=40.06 Aligned_cols=61 Identities=20% Similarity=0.170 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccC
Q 018274 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i 202 (358)
..+.+.+...++....++|. .+++|+|||.||..+-.+|..+.+.. ..-..+-+.+|.+-+
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~~~----~~~~~~~~~fg~p~~ 68 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRGRG----LGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHhcc----CCCceEEEEeCCCcc
Confidence 34455555666665555564 59999999999999888887765421 112345555655543
No 100
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=91.05 E-value=1.1 Score=41.22 Aligned_cols=119 Identities=15% Similarity=0.126 Sum_probs=59.2
Q ss_pred CEEEEEcCCCChhhhhhhhhc-ccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFE-EVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~-e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
..|||++|--|.... ...+. +. . -+.....+....++.-+|-+ .-+|... -....+.++.+.+.++
T Consensus 5 ~pVlFIhG~~Gs~~q-~rsl~~~~--~---~~~~~~~~~~~~d~ft~df~--~~~s~~~-----g~~l~~q~~~~~~~i~ 71 (225)
T PF07819_consen 5 IPVLFIHGNAGSYKQ-VRSLASEL--Q---RKALLNDNSSHFDFFTVDFN--EELSAFH-----GRTLQRQAEFLAEAIK 71 (225)
T ss_pred CEEEEECcCCCCHhH-HHHHHHHH--h---hhhhhccCccceeEEEeccC--ccccccc-----cccHHHHHHHHHHHHH
Confidence 679999998887764 22221 11 0 00001122223444444422 0111111 1223455666666666
Q ss_pred HHHhhC--cccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeee-ccCccCChh
Q 018274 147 ELFNKN--EILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA-LGDSWISPE 205 (358)
Q Consensus 147 ~f~~~~--p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~-iGng~i~p~ 205 (358)
...+.. ..-..+++.|+|||+||.. |..++.... ..+-++++|+ ||.|...|.
T Consensus 72 ~i~~~~~~~~~~~~~vilVgHSmGGlv----ar~~l~~~~--~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 72 YILELYKSNRPPPRSVILVGHSMGGLV----ARSALSLPN--YDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHhhhhccCCCCceEEEEEchhhHH----HHHHHhccc--cccccEEEEEEEcCCCCCcc
Confidence 666554 2224678999999999953 232222111 1123566666 777776653
No 101
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.01 E-value=0.47 Score=43.34 Aligned_cols=66 Identities=14% Similarity=0.102 Sum_probs=45.4
Q ss_pred ccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 131 VKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 131 ~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
...-..+.+++...++...+++|. .+++++|||.||-.+..+|..+.+.. ...+++.+..|.|-+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~p~---~~i~vtGHSLGGaiA~l~a~~l~~~~----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 104 YSAYKSLYNQVLPELKSALKQYPD---YKIIVTGHSLGGALASLLALDLRLRG----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCC---ceEEEEccCHHHHHHHHHHHHHHhhC----CCCceEEEEeCCCCCC
Confidence 333444555566666666666664 48999999999998887777765432 2346788888887764
No 102
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=90.30 E-value=0.6 Score=43.26 Aligned_cols=69 Identities=19% Similarity=0.172 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 136 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
..+.+|.+||+...+.. ...+++|++||+|+..+-..-..+..........-+|..|++-+|-+|....
T Consensus 74 ~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f 142 (233)
T PF05990_consen 74 FSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVF 142 (233)
T ss_pred HHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHH
Confidence 34444555555433321 3578999999999987665444443322111123478999999999987654
No 103
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=89.81 E-value=3.4 Score=41.31 Aligned_cols=53 Identities=13% Similarity=0.049 Sum_probs=36.9
Q ss_pred cchHHHHHHHHHHHHHHHhhCcccCCCCEE-EEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 132 KNDVEAANDLTTLLMELFNKNEILQKSPLF-IVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 132 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~-i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
.+.++.++++..+|+. +.-++++ ++|+|+||..+-.+|.+-.+ .++++++.++
T Consensus 141 ~t~~d~~~~~~~ll~~-------lgi~~~~~vvG~SmGG~ial~~a~~~P~---------~v~~lv~ia~ 194 (389)
T PRK06765 141 VTILDFVRVQKELIKS-------LGIARLHAVMGPSMGGMQAQEWAVHYPH---------MVERMIGVIG 194 (389)
T ss_pred CcHHHHHHHHHHHHHH-------cCCCCceEEEEECHHHHHHHHHHHHChH---------hhheEEEEec
Confidence 5677777777777763 3345676 99999999988877765444 3566666543
No 104
>PRK04940 hypothetical protein; Provisional
Probab=89.28 E-value=1.3 Score=39.62 Aligned_cols=61 Identities=15% Similarity=0.224 Sum_probs=40.1
Q ss_pred chHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhhh
Q 018274 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFV 208 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q~ 208 (358)
...++.+.+...+.++... .. ..++.|+|.|-||.|+-.+|.+ ..++.|+| ||.+.|..-+
T Consensus 38 ~P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~-----------~g~~aVLi-NPAv~P~~~L 98 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFL-----------CGIRQVIF-NPNLFPEENM 98 (180)
T ss_pred CHHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHH-----------HCCCEEEE-CCCCChHHHH
Confidence 4445555454555433211 11 2479999999999998888875 35777766 9999997643
No 105
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.05 E-value=1.4 Score=41.30 Aligned_cols=94 Identities=20% Similarity=0.378 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhcccCCC-cccCccCccccccccccccccCCcccccccccCC---CCcccchHHHHHH
Q 018274 65 KPWPIILWLQGGPGASGVGIGNFEEVGPF-DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN---SSFVKNDVEAAND 140 (358)
Q Consensus 65 ~~~Plilwl~GGPG~ss~~~g~~~e~GP~-~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~---~~~~~~~~~~a~~ 140 (358)
.++|+++|+-|-||-++. +.|.|=- ..++..+---|+ ..++=-.+.| -|-.++. ....-+.+++.+.
T Consensus 27 ~~~~li~~IpGNPG~~gF----Y~~F~~~L~~~l~~r~~~wt-Ish~~H~~~P----~sl~~~~s~~~~eifsL~~QV~H 97 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF----YTEFARHLHLNLIDRLPVWT-ISHAGHALMP----ASLREDHSHTNEEIFSLQDQVDH 97 (301)
T ss_pred CCceEEEEecCCCCchhH----HHHHHHHHHHhcccccceeE-EeccccccCC----cccccccccccccccchhhHHHH
Confidence 456999999999998854 3333221 111111101221 0111112333 1221111 1123467778888
Q ss_pred HHHHHHHHHhhCcccCCCCEEEEecccccchh
Q 018274 141 LTTLLMELFNKNEILQKSPLFIVAESYGGKFA 172 (358)
Q Consensus 141 ~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yv 172 (358)
=.+|++++. | +++++||.|||-|.-.+
T Consensus 98 KlaFik~~~---P--k~~ki~iiGHSiGaYm~ 124 (301)
T KOG3975|consen 98 KLAFIKEYV---P--KDRKIYIIGHSIGAYMV 124 (301)
T ss_pred HHHHHHHhC---C--CCCEEEEEecchhHHHH
Confidence 889998765 3 37899999999986544
No 106
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=88.18 E-value=1.8 Score=37.47 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=47.9
Q ss_pred ccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHH
Q 018274 105 LKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIE 184 (358)
Q Consensus 105 ~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~ 184 (358)
....+++.+|.| |.|.+.. ...+.+..++.....+.. ..+ ..+++++|+|+||..+-.+|..+.++
T Consensus 23 ~~~~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~-- 88 (212)
T smart00824 23 RGRRDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEAR-- 88 (212)
T ss_pred CCCccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhC--
Confidence 345678888877 7664432 233455556555555543 222 46899999999998887777765432
Q ss_pred hCcceeeeeeeeccCc
Q 018274 185 AGKLKLKLGGVALGDS 200 (358)
Q Consensus 185 ~~~~~inlkGi~iGng 200 (358)
...++++++.+.
T Consensus 89 ----~~~~~~l~~~~~ 100 (212)
T smart00824 89 ----GIPPAAVVLLDT 100 (212)
T ss_pred ----CCCCcEEEEEcc
Confidence 124566665443
No 107
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=87.96 E-value=0.37 Score=45.29 Aligned_cols=85 Identities=16% Similarity=0.096 Sum_probs=54.7
Q ss_pred cccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHh
Q 018274 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (358)
Q Consensus 106 ~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~ 185 (358)
+-+.+|.+|.. |+|-|.+.-. ....+.++|.++.++ |+...|- .+-++-++|.||+|...-..|..
T Consensus 56 ~GY~vV~~D~R-G~g~S~G~~~----~~~~~e~~D~~d~I~-W~~~Qpw-s~G~VGm~G~SY~G~~q~~~A~~------- 121 (272)
T PF02129_consen 56 RGYAVVVQDVR-GTGGSEGEFD----PMSPNEAQDGYDTIE-WIAAQPW-SNGKVGMYGISYGGFTQWAAAAR------- 121 (272)
T ss_dssp TT-EEEEEE-T-TSTTS-S-B-----TTSHHHHHHHHHHHH-HHHHCTT-EEEEEEEEEETHHHHHHHHHHTT-------
T ss_pred CCCEEEEECCc-ccccCCCccc----cCChhHHHHHHHHHH-HHHhCCC-CCCeEEeeccCHHHHHHHHHHhc-------
Confidence 34678999988 9999987532 115556666766664 6666553 34579999999999876665541
Q ss_pred CcceeeeeeeeccCccCChhh
Q 018274 186 GKLKLKLGGVALGDSWISPED 206 (358)
Q Consensus 186 ~~~~inlkGi~iGng~i~p~~ 206 (358)
.+--||.|+..-++.|...
T Consensus 122 --~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 122 --RPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp --T-TTEEEEEEESE-SBTCC
T ss_pred --CCCCceEEEecccCCcccc
Confidence 1336999998888777543
No 108
>PLN02571 triacylglycerol lipase
Probab=87.94 E-value=1.7 Score=43.76 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHH--H---hCcceeeeeeeeccCccCChhh
Q 018274 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAI--E---AGKLKLKLGGVALGDSWISPED 206 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~--~---~~~~~inlkGi~iGng~i~p~~ 206 (358)
..+.++++..|+.+.+++|.. ..+++|+|||.||-.+-..|..|.... . .....+++..+..|.|-+....
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN~~ 279 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGDSD 279 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccCHH
Confidence 455677888888888887764 347999999999998877777775421 0 0112356778888888776443
No 109
>COG0400 Predicted esterase [General function prediction only]
Probab=87.71 E-value=1.9 Score=39.30 Aligned_cols=81 Identities=22% Similarity=0.231 Sum_probs=49.7
Q ss_pred chHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh---hh
Q 018274 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF---VF 209 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q---~~ 209 (358)
+....++.+.+||+...+.+.- ..+++++.|-|-|+.++..+.... +-.++|+++=.|..-+..+ ..
T Consensus 75 dl~~~~~~~~~~l~~~~~~~gi-~~~~ii~~GfSqGA~ial~~~l~~---------~~~~~~ail~~g~~~~~~~~~~~~ 144 (207)
T COG0400 75 DLDLETEKLAEFLEELAEEYGI-DSSRIILIGFSQGANIALSLGLTL---------PGLFAGAILFSGMLPLEPELLPDL 144 (207)
T ss_pred hHHHHHHHHHHHHHHHHHHhCC-ChhheEEEecChHHHHHHHHHHhC---------chhhccchhcCCcCCCCCcccccc
Confidence 3444556677777776665443 257899999999998765554332 2368888887777655432 12
Q ss_pred hhhhhhhhcCCCCh
Q 018274 210 SWGPLLKDMSRLDT 223 (358)
Q Consensus 210 ~~~~~~~~~gli~~ 223 (358)
.-.+++-.+|--|+
T Consensus 145 ~~~pill~hG~~Dp 158 (207)
T COG0400 145 AGTPILLSHGTEDP 158 (207)
T ss_pred CCCeEEEeccCcCC
Confidence 33444444554443
No 110
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=87.37 E-value=1.3 Score=39.85 Aligned_cols=59 Identities=15% Similarity=0.254 Sum_probs=48.8
Q ss_pred ccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeec
Q 018274 131 VKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (358)
Q Consensus 131 ~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~i 197 (358)
..+.+++|.|+-+.++.+.++ .+.+++.|+|-|+|.-.+|.+.+++....++ .+++++|
T Consensus 44 ~rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~-----~v~~v~L 102 (192)
T PF06057_consen 44 ERTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALRA-----RVAQVVL 102 (192)
T ss_pred hCCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHHh-----heeEEEE
Confidence 457899999999999988874 4467899999999999999999988765433 6788887
No 111
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=87.27 E-value=2.6 Score=40.25 Aligned_cols=45 Identities=22% Similarity=0.179 Sum_probs=35.2
Q ss_pred CCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhh
Q 018274 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (358)
Q Consensus 157 ~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~ 206 (358)
.+++.++|+|-||+.+..++....+. .....++.++..+++|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~-----~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDR-----GLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhc-----CCCCceEEEEEecccCCcc
Confidence 46799999999999998888776542 1345788888888888764
No 112
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=87.04 E-value=1.1 Score=44.68 Aligned_cols=62 Identities=23% Similarity=0.214 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHhhCcccCC-CCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhh
Q 018274 136 EAANDLTTLLMELFNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (358)
Q Consensus 136 ~~a~~~~~fl~~f~~~~p~~~~-~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~ 206 (358)
-+|.|...+|..-.+.+|.... .|+.+.|.|||| |...++.+|. +-.+.||+=-++|.-|..
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a--------P~~~~~~iDns~~~~p~l 223 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA--------PWLFDGVIDNSSYALPPL 223 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC--------ccceeEEEecCccccchh
Confidence 4889999999988889999875 799999999998 5555555552 335677776667776643
No 113
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=86.99 E-value=1.2 Score=43.61 Aligned_cols=60 Identities=20% Similarity=0.299 Sum_probs=39.3
Q ss_pred cccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcc-cCCCCEEEEecccccchhh
Q 018274 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEI-LQKSPLFIVAESYGGKFAA 173 (358)
Q Consensus 106 ~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~-~~~~~~~i~GeSYgG~yvp 173 (358)
..+|++...-| |+|+|.+. + +.++.+++- .++-+++..+++ -+.+.+.+.|+|-||-...
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~-----~-s~~dLv~~~-~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa 230 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGP-----P-SRKDLVKDY-QACVRYLRDEEQGPKAKNIILYGHSLGGGVQA 230 (365)
T ss_pred cCCcEEEECCC-ccccCCCC-----C-CHHHHHHHH-HHHHHHHHhcccCCChheEEEeeccccHHHHH
Confidence 36799999999 99999753 2 234444433 333344444332 2457899999999997644
No 114
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=85.74 E-value=2.3 Score=38.96 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=46.9
Q ss_pred ccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeec
Q 018274 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (358)
Q Consensus 118 G~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~i 197 (358)
-+||-+... ..+.++...++..+++--|+.+|.- +.+-+.|||-|.|.+.....++ .. -.+.|+++
T Consensus 102 svgY~l~~q----~htL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~----r~----prI~gl~l 167 (270)
T KOG4627|consen 102 SVGYNLCPQ----VHTLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQ----RS----PRIWGLIL 167 (270)
T ss_pred EeccCcCcc----cccHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHh----cC----chHHHHHH
Confidence 345555432 4578888899999999888887753 3488999999988654443332 11 24567776
Q ss_pred cCccC
Q 018274 198 GDSWI 202 (358)
Q Consensus 198 Gng~i 202 (358)
-.|+-
T Consensus 168 ~~GvY 172 (270)
T KOG4627|consen 168 LCGVY 172 (270)
T ss_pred HhhHh
Confidence 66653
No 115
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=84.89 E-value=3.5 Score=41.60 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhhCcccC-CCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 137 AANDLTTLLMELFNKNEILQ-KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 137 ~a~~~~~fl~~f~~~~p~~~-~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
.++++..++++-| +--. .....|+|.|+||--+-.+|..- +-.+.+++..+|-
T Consensus 269 l~~eLlP~I~~~y---~~~~d~~~~~IaG~S~GGl~AL~~al~~---------Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 269 VQQELLPQVRAIA---PFSDDADRTVVAGQSFGGLAALYAGLHW---------PERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHhC---CCCCCccceEEEEEChHHHHHHHHHHhC---------cccccEEEEeccc
Confidence 4455555555432 2211 34689999999997665555432 2246777776654
No 116
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=84.80 E-value=1.2 Score=44.59 Aligned_cols=67 Identities=30% Similarity=0.467 Sum_probs=41.8
Q ss_pred ccccccccC-------CcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhh
Q 018274 107 KADLLFVDN-------PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (358)
Q Consensus 107 ~~~~l~iDq-------PvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~ 175 (358)
.|-|||++. |.|.- ||......-.-+.+|+-+|+...|+ ++++...=...|+..+|-||||+...-+
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyLtseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYLTSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccccHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHHHH
Confidence 466788875 44444 3432222223456666667666554 6666655557899999999999765444
No 117
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=83.98 E-value=4.4 Score=38.27 Aligned_cols=103 Identities=16% Similarity=0.173 Sum_probs=62.1
Q ss_pred CEEEEEcCCCChhhhhhhhh-cccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNF-EEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~-~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
|.++++|++=|.-.. +..| .+.+| ..-++-++.| |.|.- .....+.++.++...+.|+
T Consensus 1 ~pLF~fhp~~G~~~~-~~~L~~~l~~--------------~~~v~~l~a~-g~~~~-----~~~~~~l~~~a~~yv~~Ir 59 (257)
T COG3319 1 PPLFCFHPAGGSVLA-YAPLAAALGP--------------LLPVYGLQAP-GYGAG-----EQPFASLDDMAAAYVAAIR 59 (257)
T ss_pred CCEEEEcCCCCcHHH-HHHHHHHhcc--------------CceeeccccC-ccccc-----ccccCCHHHHHHHHHHHHH
Confidence 568899987776433 2222 12222 2346677777 55531 1234577777776666665
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
+ ..|+- |.+|.|.|+||..+=.+|.++..+ | -.+.-++|-+....
T Consensus 60 ~---~QP~G---Py~L~G~S~GG~vA~evA~qL~~~---G---~~Va~L~llD~~~~ 104 (257)
T COG3319 60 R---VQPEG---PYVLLGWSLGGAVAFEVAAQLEAQ---G---EEVAFLGLLDAVPP 104 (257)
T ss_pred H---hCCCC---CEEEEeeccccHHHHHHHHHHHhC---C---CeEEEEEEeccCCC
Confidence 4 67754 999999999998777777665432 2 13455566555444
No 118
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=83.76 E-value=1.7 Score=39.73 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhh
Q 018274 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (358)
Q Consensus 134 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~ 175 (358)
.+-+-.|+.++.+.|++.+++ +|||+|+|||-|+..+-.|
T Consensus 73 ~~~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~L 112 (207)
T PF11288_consen 73 FDLAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRL 112 (207)
T ss_pred HHhhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHH
Confidence 334556788888888888765 7999999999998765444
No 119
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=83.16 E-value=3.8 Score=41.77 Aligned_cols=52 Identities=19% Similarity=0.335 Sum_probs=36.3
Q ss_pred ccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHH
Q 018274 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (358)
Q Consensus 118 G~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~ 177 (358)
|.||+... ....++..+++.+.++..++.++ .+++.|+|||+||.++-.++.
T Consensus 130 g~gYDwR~-----~~~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 130 GFGYDFRQ-----SNRLPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred cCCCCccc-----cccHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHH
Confidence 66666432 12245566778888888877544 579999999999987665554
No 120
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=82.71 E-value=14 Score=40.09 Aligned_cols=153 Identities=18% Similarity=0.255 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHhhcchhhhhcCCCCCCcceeeEEEecC-----CceEEEEEEEcCCCC----CCCCCCCCEEEEEcCCC
Q 018274 7 FVATLLFLVSLLFNGGAAARALNKNQDASEEWGYVEVRP-----KAHMFWWLYKSPYRI----ENPSKPWPIILWLQGGP 77 (358)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~v~~-----~~~~f~~~~~~~~~~----~~~~~~~Plilwl~GGP 77 (358)
+++.++++++++---|..+..|..+.-+..|.-+++++. ..++-++.|.-..+. ..+...-| |||+-|--
T Consensus 21 iia~ll~l~ll~~f~g~~en~CsmtYMypsy~r~i~i~~r~t~~a~kY~LYLY~Egs~~~e~~~lelsGIP-VLFIPGNA 99 (973)
T KOG3724|consen 21 IIAVLLGLGLLLHFLGHQENGCSMTYMYPSYYRFIEIPERLTPQADKYSLYLYREGSRWWERSTLELSGIP-VLFIPGNA 99 (973)
T ss_pred HHHHHHHHHHHHHhcCCCCCCceeEEEeccceeecCCcccccCCCCceEEEEecccccccccccccCCCce-EEEecCCC
Confidence 345555566555545544554444444444444455543 134444555322121 12223333 78888877
Q ss_pred Chh-------hhhhhhhcccCCCccc-CccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHH
Q 018274 78 GAS-------GVGIGNFEEVGPFDTY-LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELF 149 (358)
Q Consensus 78 G~s-------s~~~g~~~e~GP~~~~-~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~ 149 (358)
|+- |. ..+-...||++-. -..|+++. +-.-+|= .=-||-- .-.+..++++.+.++++.-+
T Consensus 100 GSyKQvRSiAS~-a~n~y~~~~~e~t~~~d~~~~~----DFFaVDF--nEe~tAm-----~G~~l~dQtEYV~dAIk~IL 167 (973)
T KOG3724|consen 100 GSYKQVRSIASV-AQNAYQGGPFEKTEDRDNPFSF----DFFAVDF--NEEFTAM-----HGHILLDQTEYVNDAIKYIL 167 (973)
T ss_pred CchHHHHHHHHH-HhhhhcCCchhhhhcccCcccc----ceEEEcc--cchhhhh-----ccHhHHHHHHHHHHHHHHHH
Confidence 752 22 2344567888732 23345444 2222220 0011111 12456778888888877666
Q ss_pred hhC---cccC---CCCEEEEecccccchh
Q 018274 150 NKN---EILQ---KSPLFIVAESYGGKFA 172 (358)
Q Consensus 150 ~~~---p~~~---~~~~~i~GeSYgG~yv 172 (358)
+.+ ++|. ...+.|+||||||..+
T Consensus 168 slYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 168 SLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred HHhhcccccCCCCCceEEEEeccchhHHH
Confidence 654 3454 3349999999999753
No 121
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=82.23 E-value=7.9 Score=37.40 Aligned_cols=72 Identities=10% Similarity=0.068 Sum_probs=37.7
Q ss_pred cchHHHHHHHHHHHHHHHhhCcc-cCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 132 KNDVEAANDLTTLLMELFNKNEI-LQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 132 ~~~~~~a~~~~~fl~~f~~~~p~-~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
.+.++-++|+-..++-+-..... +..+++.|+|||=|-.=+-. ++...+.. ...-.++|+||-.|.-|.+..
T Consensus 81 ~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~---Yl~~~~~~-~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 81 SSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLH---YLSSPNPS-PSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp --HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHH---HHHH-TT----CCCEEEEEEEEE---TTST
T ss_pred chhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHH---HHhccCcc-ccccceEEEEEeCCCCChhHh
Confidence 35666677776666644444322 34678999999999654322 22222110 114579999999998887654
No 122
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=82.21 E-value=1.8 Score=42.12 Aligned_cols=78 Identities=8% Similarity=0.002 Sum_probs=45.5
Q ss_pred ccccccccCCcccccccccCCCCcccchHHHH-HHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHh
Q 018274 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAA-NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (358)
Q Consensus 107 ~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a-~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~ 185 (358)
-++++-+|.+ |-|.|.. ..+.++.+ .++..+++...+..+ ..+++++|+|+||..+..++..-
T Consensus 94 G~~V~~~D~~-g~g~s~~------~~~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~------ 157 (350)
T TIGR01836 94 GQDVYLIDWG-YPDRADR------YLTLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALY------ 157 (350)
T ss_pred CCeEEEEeCC-CCCHHHh------cCCHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhC------
Confidence 3577778865 6565431 11333333 335555555444443 46899999999998765544321
Q ss_pred CcceeeeeeeeccCccCC
Q 018274 186 GKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 186 ~~~~inlkGi~iGng~i~ 203 (358)
+-.++++++-++.++
T Consensus 158 ---~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 158 ---PDKIKNLVTMVTPVD 172 (350)
T ss_pred ---chheeeEEEeccccc
Confidence 114677777666555
No 123
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=81.94 E-value=2.8 Score=42.87 Aligned_cols=32 Identities=16% Similarity=0.023 Sum_probs=21.1
Q ss_pred HHHHHHHhhCcccCCCCEEEEecccccchhhhh
Q 018274 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (358)
Q Consensus 143 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~ 175 (358)
+++++..+.|..- ...+-|+|||-|++-+-.+
T Consensus 166 kWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 166 KWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 5555555555432 3469999999998765443
No 124
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=81.82 E-value=2.2 Score=46.56 Aligned_cols=85 Identities=13% Similarity=0.087 Sum_probs=53.6
Q ss_pred cccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCc--------------ccCCCCEEEEecccccch
Q 018274 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNE--------------ILQKSPLFIVAESYGGKF 171 (358)
Q Consensus 106 ~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p--------------~~~~~~~~i~GeSYgG~y 171 (358)
+-+.+|++|.+ |+|-|.+... ....+..+|..+.++ |+.... .+.+-++-++|.||||..
T Consensus 278 rGYaVV~~D~R-Gtg~SeG~~~----~~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 278 RGFAVVYVSGI-GTRGSDGCPT----TGDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred CCeEEEEEcCC-CCCCCCCcCc----cCCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 46789999977 9999986421 112333445544443 554321 122458999999999976
Q ss_pred hhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 172 AATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 172 vp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
.-.+|.. ..-.||.|+-..|+.|-.
T Consensus 352 ~~~aAa~---------~pp~LkAIVp~a~is~~y 376 (767)
T PRK05371 352 PNAVATT---------GVEGLETIIPEAAISSWY 376 (767)
T ss_pred HHHHHhh---------CCCcceEEEeeCCCCcHH
Confidence 6554432 123689999877776643
No 125
>PRK14567 triosephosphate isomerase; Provisional
Probab=81.19 E-value=3.7 Score=38.63 Aligned_cols=63 Identities=19% Similarity=0.322 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
.+.+++.+.+++.++..+-+-....+=|. |||..-|.-+..+.+. -++.|+.||.+-++|..+
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~-------~diDG~LVGgasL~~~~F 240 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL-------PDVDGGLIGGASLKAAEF 240 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC-------CCCCEEEeehhhhcHHHH
Confidence 56677889999999876422112233343 9999999988888652 368999999999998654
No 126
>PRK14566 triosephosphate isomerase; Provisional
Probab=81.08 E-value=3.5 Score=38.95 Aligned_cols=63 Identities=14% Similarity=0.306 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
.+.+++++.|+++++..........+=|. |||..-|.-+..|.. .-++.|+.||..-++|..+
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~-------~~dIDG~LVGgASL~~~~F 250 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFA-------QPDVDGGLIGGASLNSTEF 250 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhc-------CCCCCeEEechHhcCHHHH
Confidence 45578899999999865421112233344 999999999998865 2369999999999998654
No 127
>PLN02934 triacylglycerol lipase
Probab=80.64 E-value=3.4 Score=42.60 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHH
Q 018274 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (358)
Q Consensus 139 ~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~ 180 (358)
..+...|+.+++++|.+ +++++|||-||-.+-..|..+.
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHH
Confidence 34677788888888865 8999999999988777766554
No 128
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=80.25 E-value=5.7 Score=37.54 Aligned_cols=64 Identities=23% Similarity=0.321 Sum_probs=35.3
Q ss_pred chHHHHHHHHHHHHHHHhh-Cccc---CCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 133 NDVEAANDLTTLLMELFNK-NEIL---QKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~-~p~~---~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
.+.+.++++.++|.+=++. .|.. .-.++.|.|||=||+-+-.++.. +.+.....+++++++-+|
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~----~~~~~~~~~~~ali~lDP 129 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALG----NASSSLDLRFSALILLDP 129 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhh----hcccccccceeEEEEecc
Confidence 3444555555555441211 2210 12469999999999954443332 222233578999999443
No 129
>PF03283 PAE: Pectinacetylesterase
Probab=80.15 E-value=9.2 Score=37.93 Aligned_cols=127 Identities=13% Similarity=0.061 Sum_probs=61.9
Q ss_pred CEEEEEcCCCChhhhh---hhhhcccCCCc-----c--------cCccCccccccccccccccCCcccccccccCCCCcc
Q 018274 68 PIILWLQGGPGASGVG---IGNFEEVGPFD-----T--------YLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFV 131 (358)
Q Consensus 68 Plilwl~GGPG~ss~~---~g~~~e~GP~~-----~--------~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~ 131 (358)
-+||+|+||--|.+.. .....+.|-.. + +...||.= ...|+|||= =-+|-++..+.....
T Consensus 51 ~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f--~~wN~V~vp--YC~Gd~~~G~~~~~~ 126 (361)
T PF03283_consen 51 KWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDF--YNWNHVFVP--YCDGDSHSGDVEPVD 126 (361)
T ss_pred eEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcc--ccccEEEEE--ecCCccccCcccccc
Confidence 5999999999998852 01122333221 0 11234411 235778873 234433322111000
Q ss_pred cc---hHHHHHHHH-HHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 132 KN---DVEAANDLT-TLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 132 ~~---~~~~a~~~~-~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
.. ..-....++ ..|+..... +++ ..++.|+|.|-||.=+..-+.++.+.... ..+++++.=..-++|
T Consensus 127 ~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~---~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 127 YGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS---SVKVKCLSDSGFFLD 198 (361)
T ss_pred cCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---CceEEEecccccccc
Confidence 00 001112222 333333333 332 35799999999998777767776654432 234555544333443
No 130
>PLN02324 triacylglycerol lipase
Probab=80.03 E-value=5.9 Score=39.93 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=48.1
Q ss_pred chHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHh------CcceeeeeeeeccCccCChh
Q 018274 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA------GKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~------~~~~inlkGi~iGng~i~p~ 205 (358)
+...+.+++..-|++..+++|.. ...++|+|||.||-.+...|..|.+.... ....+++.-+..|.|-+.-.
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN~ 268 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGDH 268 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCCH
Confidence 34456777888888888877753 23699999999998887777777542110 11234566667777766543
No 131
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=79.99 E-value=6.1 Score=38.63 Aligned_cols=110 Identities=16% Similarity=0.175 Sum_probs=60.6
Q ss_pred CCEEEEEcCCCChhhhhhh-hhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIG-NFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g-~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl 145 (358)
.|++|-+||=-|.|...+. .++| .--.+...++-.+-. |.|.+--..+.-+...+. +|+..|+
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~------------~~~~rg~~~Vv~~~R-gcs~~~n~~p~~yh~G~t---~D~~~~l 138 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMR------------ALSRRGWLVVVFHFR-GCSGEANTSPRLYHSGET---EDIRFFL 138 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHH------------HHHhcCCeEEEEecc-cccCCcccCcceecccch---hHHHHHH
Confidence 4999999998777765321 0000 000111345556656 666554333333333333 5555666
Q ss_pred HHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 146 ~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
..-.+++| .+|+|.+|-|.||-. +|.++.++ ..+. ..-.++++-+|+
T Consensus 139 ~~l~~~~~---~r~~~avG~SLGgnm---La~ylgee--g~d~-~~~aa~~vs~P~ 185 (345)
T COG0429 139 DWLKARFP---PRPLYAVGFSLGGNM---LANYLGEE--GDDL-PLDAAVAVSAPF 185 (345)
T ss_pred HHHHHhCC---CCceEEEEecccHHH---HHHHHHhh--ccCc-ccceeeeeeCHH
Confidence 55444566 579999999999953 45555543 1222 235666665554
No 132
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=79.82 E-value=5.1 Score=30.56 Aligned_cols=77 Identities=19% Similarity=0.329 Sum_probs=48.8
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCC
Q 018274 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN 127 (358)
Q Consensus 48 ~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~ 127 (358)
.+|+..+..+ ++ .+.+|+.+||--..|.. +.-+. .. .+ .+-..++-+|++ |.|.|...
T Consensus 3 ~L~~~~w~p~----~~--~k~~v~i~HG~~eh~~r-y~~~a---~~-----L~----~~G~~V~~~D~r-GhG~S~g~-- 60 (79)
T PF12146_consen 3 KLFYRRWKPE----NP--PKAVVVIVHGFGEHSGR-YAHLA---EF-----LA----EQGYAVFAYDHR-GHGRSEGK-- 60 (79)
T ss_pred EEEEEEecCC----CC--CCEEEEEeCCcHHHHHH-HHHHH---HH-----HH----hCCCEEEEECCC-cCCCCCCc--
Confidence 5666666531 11 25799999987544443 33332 11 01 234578889999 99999753
Q ss_pred CCcccchHHHHHHHHHHHH
Q 018274 128 SSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 128 ~~~~~~~~~~a~~~~~fl~ 146 (358)
.....+-++..+|+..|++
T Consensus 61 rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 RGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred ccccCCHHHHHHHHHHHhC
Confidence 3467788889999888764
No 133
>PLN02761 lipase class 3 family protein
Probab=77.39 E-value=7.8 Score=40.11 Aligned_cols=73 Identities=8% Similarity=0.086 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHHHhhCccc-C--CCCEEEEecccccchhhhhHHHHHHHHH----hCcceeeeeeeeccCccCChhh
Q 018274 134 DVEAANDLTTLLMELFNKNEIL-Q--KSPLFIVAESYGGKFAATLGLAAVKAIE----AGKLKLKLGGVALGDSWISPED 206 (358)
Q Consensus 134 ~~~~a~~~~~fl~~f~~~~p~~-~--~~~~~i~GeSYgG~yvp~~a~~i~~~~~----~~~~~inlkGi~iGng~i~p~~ 206 (358)
...+.+++...++...+.+|.. + ...++|+|||.||-.+-..|..|....- .....+++.-+..|.|=+.-..
T Consensus 267 k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN~~ 346 (527)
T PLN02761 267 SFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGNLR 346 (527)
T ss_pred chhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCCHH
Confidence 3456777888888888877532 1 2369999999999988877777754211 1123456777788887766443
No 134
>PLN02753 triacylglycerol lipase
Probab=76.97 E-value=7.6 Score=40.23 Aligned_cols=74 Identities=11% Similarity=0.097 Sum_probs=50.9
Q ss_pred chHHHHHHHHHHHHHHHhhCccc--CCCCEEEEecccccchhhhhHHHHHHHH--H-hCcceeeeeeeeccCccCChhh
Q 018274 133 NDVEAANDLTTLLMELFNKNEIL--QKSPLFIVAESYGGKFAATLGLAAVKAI--E-AGKLKLKLGGVALGDSWISPED 206 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~~p~~--~~~~~~i~GeSYgG~yvp~~a~~i~~~~--~-~~~~~inlkGi~iGng~i~p~~ 206 (358)
+...+.+++...++...+++|.- ....++|+|||.||-.+-..|..|.+.. . .....+++.-+..|.|-+....
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN~a 363 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGNVR 363 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccCHH
Confidence 34567788888899988877632 2458999999999998888777775421 1 1112355677788887776543
No 135
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=76.26 E-value=18 Score=35.21 Aligned_cols=56 Identities=11% Similarity=0.097 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 137 AANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 137 ~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
+..|.++.+. |+...|+...+++.++|+|-||...-.+|.. + -.+++++...|+..
T Consensus 155 ~~~D~~ravd-~l~slpevD~~rI~v~G~SqGG~lal~~aaL--d--------~rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 155 VYLDAVRAVD-FLRSLPEVDGKRIGVTGGSQGGGLALAAAAL--D--------PRVKAAAADVPFLC 210 (320)
T ss_dssp HHHHHHHHHH-HHHTSTTEEEEEEEEEEETHHHHHHHHHHHH--S--------ST-SEEEEESESSS
T ss_pred HHHHHHHHHH-HHHhCCCcCcceEEEEeecCchHHHHHHHHh--C--------ccccEEEecCCCcc
Confidence 4466666664 5667898888899999999999876555442 1 14788888777654
No 136
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=75.72 E-value=14 Score=37.98 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=46.8
Q ss_pred cccccccCCcccccccccC----CCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhh
Q 018274 108 ADLLFVDNPVGTGYSYVED----NSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (358)
Q Consensus 108 ~~~l~iDqPvG~GfS~~~~----~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~ 175 (358)
|.++.++.+ =.|-|.... ++--.-+.+++-.|+..|++.-=.+++.-.+.|++.+|-||.|....-+
T Consensus 119 A~v~~lEHR-FYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~ 189 (514)
T KOG2182|consen 119 ATVFQLEHR-FYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWF 189 (514)
T ss_pred CeeEEeeee-ccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHH
Confidence 467777776 556554331 1223456788889999999887777776555699999999999765443
No 137
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=75.54 E-value=7.7 Score=35.81 Aligned_cols=64 Identities=16% Similarity=0.192 Sum_probs=45.7
Q ss_pred cccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcc-eeeeeeeeccCcc
Q 018274 130 FVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKL-KLKLGGVALGDSW 201 (358)
Q Consensus 130 ~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~-~inlkGi~iGng~ 201 (358)
+..+.++.++.+.+.+..+.. ..+++.|+|.|-|+..+-....++.+. +.. .-+++-+.+||+-
T Consensus 25 ~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~---~~~~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 25 YDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAAD---GDPPPDDLSFVLIGNPR 89 (225)
T ss_pred cchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhc---CCCCcCceEEEEecCCC
Confidence 456777788888888887665 467899999999987666555555432 111 1478899999874
No 138
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=75.47 E-value=9.4 Score=35.69 Aligned_cols=64 Identities=22% Similarity=0.331 Sum_probs=46.2
Q ss_pred ccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHH
Q 018274 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (358)
Q Consensus 107 ~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~ 180 (358)
...++=|+-| |-|--.. ....++.++.|..+...|+. -+..+|+-++|||+||..+=.+|.++-
T Consensus 33 ~iel~avqlP-GR~~r~~---ep~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~ 96 (244)
T COG3208 33 DIELLAVQLP-GRGDRFG---EPLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLE 96 (244)
T ss_pred hhheeeecCC-CcccccC---CcccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHH
Confidence 3467778888 7774442 24678888888877777752 345789999999999987666666553
No 139
>PLN02719 triacylglycerol lipase
Probab=75.43 E-value=8.6 Score=39.73 Aligned_cols=74 Identities=12% Similarity=0.151 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHHHHHhhCcccC--CCCEEEEecccccchhhhhHHHHHHHH-H--hCcceeeeeeeeccCccCChhhh
Q 018274 134 DVEAANDLTTLLMELFNKNEILQ--KSPLFIVAESYGGKFAATLGLAAVKAI-E--AGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 134 ~~~~a~~~~~fl~~f~~~~p~~~--~~~~~i~GeSYgG~yvp~~a~~i~~~~-~--~~~~~inlkGi~iGng~i~p~~q 207 (358)
...+.+++...+++..+++|.+. ...++|+|||.||-.+...|..|.+.. . .....+++.-+..|.|-+.-..+
T Consensus 272 k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN~~F 350 (518)
T PLN02719 272 KFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGNIRF 350 (518)
T ss_pred chhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccCHHH
Confidence 34566778888988888888542 347999999999998888887776531 1 11123456677788877765443
No 140
>PLN00413 triacylglycerol lipase
Probab=74.87 E-value=6.8 Score=40.10 Aligned_cols=38 Identities=21% Similarity=0.385 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHH
Q 018274 140 DLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (358)
Q Consensus 140 ~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~ 180 (358)
++...|+..++.+|.+ +++|+|||.||..+-..|..+.
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~ 306 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLI 306 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHH
Confidence 4667778888777754 8999999999998877776554
No 141
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=74.80 E-value=6.9 Score=37.98 Aligned_cols=53 Identities=25% Similarity=0.275 Sum_probs=40.5
Q ss_pred ccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEeccccc
Q 018274 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 169 (358)
Q Consensus 109 ~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG 169 (358)
.+.-||.. ..|.|-. ..+.+-+..|+|+..|+..+-. +++..+..|.|||.||
T Consensus 82 ~v~~vd~R-nHG~Sp~----~~~h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 82 DVYAVDVR-NHGSSPK----ITVHNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred ceEEEecc-cCCCCcc----ccccCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 66777877 7887753 3456788899999888886432 3457799999999999
No 142
>PLN02408 phospholipase A1
Probab=74.00 E-value=9.6 Score=37.85 Aligned_cols=66 Identities=11% Similarity=0.101 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 136 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
.+.+++.+-+++..+++|.. ...++|+|||.||-.+-..|..|.+.... ...++-+..|.|-+.-.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~~---~~~V~v~tFGsPRVGN~ 244 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFKR---APMVTVISFGGPRVGNR 244 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcCC---CCceEEEEcCCCCcccH
Confidence 45667778888888888864 34699999999998887777776542111 11355667777766543
No 143
>PLN02429 triosephosphate isomerase
Probab=73.38 E-value=7.9 Score=37.62 Aligned_cols=63 Identities=17% Similarity=0.255 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
.+.++.++.++++|+.. +.+-....+-|. |||..-|.-+..+.. ..++.|+.||.+.+++..+
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~-------~~diDG~LVGgASL~~~~F 301 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAK-------EEDIDGFLVGGASLKGPEF 301 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhc-------CCCCCEEEeecceecHHHH
Confidence 34566788899988864 332222344444 999999988887764 3478999999999988654
No 144
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=72.40 E-value=28 Score=34.78 Aligned_cols=114 Identities=22% Similarity=0.341 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccc--ccccccccCCcccccccccCCCCcccchHHHHHHHH
Q 018274 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK--KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLT 142 (358)
Q Consensus 65 ~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~--~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~ 142 (358)
+-.| +|.+||=||+=-- |...=|.-. .++.++-.. .+.||-=--| |.|||...+..+ -+..++|+-+.
T Consensus 151 ~v~P-lLl~HGwPGsv~E----FykfIPlLT--~p~~hg~~~d~~FEVI~PSlP-GygwSd~~sk~G--Fn~~a~Arvmr 220 (469)
T KOG2565|consen 151 KVKP-LLLLHGWPGSVRE----FYKFIPLLT--DPKRHGNESDYAFEVIAPSLP-GYGWSDAPSKTG--FNAAATARVMR 220 (469)
T ss_pred cccc-eEEecCCCchHHH----HHhhhhhhc--CccccCCccceeEEEeccCCC-CcccCcCCccCC--ccHHHHHHHHH
Confidence 3446 4568999986532 222223211 233233322 2345544445 999998765443 35667777666
Q ss_pred HHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 143 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
..+. ++.-++|||-|--||......+|....+ |+.|+=+.+..+.|
T Consensus 221 kLMl-------RLg~nkffiqGgDwGSiI~snlasLyPe---------nV~GlHlnm~~~~s 266 (469)
T KOG2565|consen 221 KLML-------RLGYNKFFIQGGDWGSIIGSNLASLYPE---------NVLGLHLNMCFVNS 266 (469)
T ss_pred HHHH-------HhCcceeEeecCchHHHHHHHHHhhcch---------hhhHhhhcccccCC
Confidence 5554 3456789999888888888777776544 56666666655554
No 145
>PLN02162 triacylglycerol lipase
Probab=72.36 E-value=11 Score=38.66 Aligned_cols=39 Identities=21% Similarity=0.338 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHH
Q 018274 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (358)
Q Consensus 139 ~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~ 180 (358)
..+.+.|+..++++|.+ +++++|||.||-.+-..|..+.
T Consensus 262 ~~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~ 300 (475)
T PLN02162 262 YTIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILA 300 (475)
T ss_pred HHHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHH
Confidence 34556677777777754 8999999999987766665543
No 146
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=71.83 E-value=8 Score=35.67 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=25.9
Q ss_pred HHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHH
Q 018274 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (358)
Q Consensus 142 ~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 181 (358)
.++++...+.++. +++|+|||=||..+-..|..+.+
T Consensus 72 ~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 72 LAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 3566666655554 69999999999887776665433
No 147
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=71.09 E-value=7.3 Score=35.47 Aligned_cols=45 Identities=16% Similarity=0.075 Sum_probs=32.8
Q ss_pred cchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHH
Q 018274 132 KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (358)
Q Consensus 132 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~ 177 (358)
.+.+..++.+.+.|.+..+..+.- .+++.++|||.||-++=....
T Consensus 53 ~gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 53 DGIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred hhhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHH
Confidence 456667777888888777665543 579999999999988754333
No 148
>COG0627 Predicted esterase [General function prediction only]
Probab=70.60 E-value=9.5 Score=37.13 Aligned_cols=107 Identities=20% Similarity=0.151 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhcccCCCccc--------CccCccccccccccccccCCcccccccccCCCCcccchHH
Q 018274 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTY--------LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVE 136 (358)
Q Consensus 65 ~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~--------~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~ 136 (358)
++-|+++ +.+|..|.. =.+.+.++.+-. ..+.-.-+....++-=|+ |+|.|.|+..+...-.....
T Consensus 52 ~~ipV~~-~l~G~t~~~---~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~- 125 (316)
T COG0627 52 RDIPVLY-LLSGLTCNE---PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG- 125 (316)
T ss_pred CCCCEEE-EeCCCCCCC---CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC-
Confidence 4445554 455777774 144555665421 112223344444454445 78999998654322111111
Q ss_pred HHHHHHHHHH-----HHHhhCcccCC-CCEEEEecccccchhhhhHHH
Q 018274 137 AANDLTTLLM-----ELFNKNEILQK-SPLFIVAESYGGKFAATLGLA 178 (358)
Q Consensus 137 ~a~~~~~fl~-----~f~~~~p~~~~-~~~~i~GeSYgG~yvp~~a~~ 178 (358)
..+...||. .|.+.||.-+. ..-.|+|+|+||+=+-.+|.+
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~ 172 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALK 172 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhh
Confidence 123333332 33334553221 368999999999876666554
No 149
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=69.75 E-value=6.1 Score=36.17 Aligned_cols=108 Identities=26% Similarity=0.294 Sum_probs=66.2
Q ss_pred EEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCccc
Q 018274 40 YVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGT 119 (358)
Q Consensus 40 y~~v~~~~~~f~~~~~~~~~~~~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~ 119 (358)
-+.|++ .++-|.-+.+ -| --||.+-|--||+-.++ +|--.++.+ -. ...|+-||-| |.
T Consensus 25 kv~vng-~ql~y~~~G~-----G~----~~iLlipGalGs~~tDf------~pql~~l~k----~l-~~TivawDPp-GY 82 (277)
T KOG2984|consen 25 KVHVNG-TQLGYCKYGH-----GP----NYILLIPGALGSYKTDF------PPQLLSLFK----PL-QVTIVAWDPP-GY 82 (277)
T ss_pred eeeecC-ceeeeeecCC-----CC----ceeEecccccccccccC------CHHHHhcCC----CC-ceEEEEECCC-CC
Confidence 344544 4666654432 12 25777888888876542 333222211 11 1678999966 99
Q ss_pred ccccccCCC---CcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHH
Q 018274 120 GYSYVEDNS---SFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (358)
Q Consensus 120 GfS~~~~~~---~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i 179 (358)
|-|...+.+ .+-.-|.+.|-|+.++|+ -.+|-|.|-|=||.-.-..|.+-
T Consensus 83 G~SrPP~Rkf~~~ff~~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTalivAak~ 135 (277)
T KOG2984|consen 83 GTSRPPERKFEVQFFMKDAEYAVDLMEALK----------LEPFSVLGWSDGGITALIVAAKG 135 (277)
T ss_pred CCCCCCcccchHHHHHHhHHHHHHHHHHhC----------CCCeeEeeecCCCeEEEEeeccC
Confidence 999864321 234456667777777775 35899999999998766555543
No 150
>PLN02802 triacylglycerol lipase
Probab=69.54 E-value=11 Score=38.86 Aligned_cols=66 Identities=9% Similarity=0.121 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 136 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
.+.+++..-++.+++++|.. ...++|+|||.||-.+-..|..|..... ..+.+..+..|.|-+.-.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~---~~~pV~vyTFGsPRVGN~ 374 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVP---AAPPVAVFSFGGPRVGNR 374 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCC---CCCceEEEEcCCCCcccH
Confidence 45567777788888776642 2469999999999888777776644211 123456677777766543
No 151
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=69.46 E-value=27 Score=33.52 Aligned_cols=100 Identities=19% Similarity=0.275 Sum_probs=60.6
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccccc--ccccccCCcccccccccCCCCcccchHHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKA--DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~--~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~f 144 (358)
..+|+=+||-||+=-= + - -=.++...+ .++=|.-| |-|++-..... ..+.++-+ .|
T Consensus 35 ~gTVv~~hGsPGSH~D-F---k-----------Yi~~~l~~~~iR~I~iN~P-Gf~~t~~~~~~--~~~n~er~----~~ 92 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHND-F---K-----------YIRPPLDEAGIRFIGINYP-GFGFTPGYPDQ--QYTNEERQ----NF 92 (297)
T ss_pred ceeEEEecCCCCCccc-h---h-----------hhhhHHHHcCeEEEEeCCC-CCCCCCCCccc--ccChHHHH----HH
Confidence 4689999999997531 1 0 001233333 45566788 88888654322 22333333 45
Q ss_pred HHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 145 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
.+.+++.-. . +.++.+.|||-|+--+-.+|.. .++.|++|-||.
T Consensus 93 ~~~ll~~l~-i-~~~~i~~gHSrGcenal~la~~-----------~~~~g~~lin~~ 136 (297)
T PF06342_consen 93 VNALLDELG-I-KGKLIFLGHSRGCENALQLAVT-----------HPLHGLVLINPP 136 (297)
T ss_pred HHHHHHHcC-C-CCceEEEEeccchHHHHHHHhc-----------CccceEEEecCC
Confidence 556655432 1 3678999999999766555542 157899998875
No 152
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=68.20 E-value=7.5 Score=38.10 Aligned_cols=59 Identities=19% Similarity=0.205 Sum_probs=39.2
Q ss_pred HHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 141 LTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 141 ~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
+.+-++...+++|+ ..++++|||-||-++...|..|...... ...+++-+..|-|-+.-
T Consensus 157 ~~~~~~~L~~~~~~---~~i~vTGHSLGgAlA~laa~~i~~~~~~--~~~~v~v~tFG~PRvGn 215 (336)
T KOG4569|consen 157 LDAELRRLIELYPN---YSIWVTGHSLGGALASLAALDLVKNGLK--TSSPVKVYTFGQPRVGN 215 (336)
T ss_pred HHHHHHHHHHhcCC---cEEEEecCChHHHHHHHHHHHHHHcCCC--CCCceEEEEecCCCccc
Confidence 33444444456664 4999999999999999999888763211 23456666677665543
No 153
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=67.50 E-value=7.8 Score=36.20 Aligned_cols=69 Identities=26% Similarity=0.241 Sum_probs=43.9
Q ss_pred cccccccccCCcccccccccCCCCcccch-HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHH
Q 018274 106 KKADLLFVDNPVGTGYSYVEDNSSFVKND-VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (358)
Q Consensus 106 ~~~~~l~iDqPvG~GfS~~~~~~~~~~~~-~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~ 178 (358)
.-+.+|-.|-. |.|-|.....+.....- +=+..|+-..|..-=+.-| ..|.|.+||||||+-.-.+++.
T Consensus 56 ~Gf~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~~ 125 (281)
T COG4757 56 AGFEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQH 125 (281)
T ss_pred cCceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccccC
Confidence 34578888988 99988865433333332 3344455555543222334 4699999999999987766654
No 154
>PLN02847 triacylglycerol lipase
Probab=67.19 E-value=6.1 Score=41.55 Aligned_cols=64 Identities=20% Similarity=0.109 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccC-ccCChh
Q 018274 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD-SWISPE 205 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGn-g~i~p~ 205 (358)
..+.+.+...|+.-++.+|.| ++.|+|||.||-.+..++..+.+. ..--+++.++.|- |+++..
T Consensus 231 rwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~----~~fssi~CyAFgPp~cvS~e 295 (633)
T PLN02847 231 RWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQ----KEFSSTTCVTFAPAACMTWD 295 (633)
T ss_pred HHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcC----CCCCCceEEEecCchhcCHH
Confidence 334444445566666678877 899999999999887776554321 1112466777764 344443
No 155
>COG5510 Predicted small secreted protein [Function unknown]
Probab=65.60 E-value=5.6 Score=26.86 Aligned_cols=22 Identities=27% Similarity=0.289 Sum_probs=17.4
Q ss_pred CcchhhHHHHHHHHHHHHhhcc
Q 018274 1 MEKLCGFVATLLFLVSLLFNGG 22 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (358)
||+.++..++++++-++|.+|-
T Consensus 2 mk~t~l~i~~vll~s~llaaCN 23 (44)
T COG5510 2 MKKTILLIALVLLASTLLAACN 23 (44)
T ss_pred chHHHHHHHHHHHHHHHHHHhh
Confidence 7888888888887777777774
No 156
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=65.43 E-value=16 Score=36.16 Aligned_cols=101 Identities=20% Similarity=0.261 Sum_probs=64.4
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHH
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~ 147 (358)
-|||-..|--| |.|+|=.... -.-.+.+|=+..| |-+-|.+. .++.++..+++.+.+|--+
T Consensus 244 ~LvIC~EGNAG--------FYEvG~m~tP-------~~lgYsvLGwNhP-GFagSTG~---P~p~n~~nA~DaVvQfAI~ 304 (517)
T KOG1553|consen 244 DLVICFEGNAG--------FYEVGVMNTP-------AQLGYSVLGWNHP-GFAGSTGL---PYPVNTLNAADAVVQFAIQ 304 (517)
T ss_pred eEEEEecCCcc--------ceEeeeecCh-------HHhCceeeccCCC-CccccCCC---CCcccchHHHHHHHHHHHH
Confidence 57887776644 4454433211 1112234444457 66666543 4677888888877777665
Q ss_pred HHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCcc
Q 018274 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (358)
Q Consensus 148 f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~ 201 (358)
-+ .|+..++.|.|-|-||.-+...|.- .-++|++++-.-+
T Consensus 305 ~L----gf~~edIilygWSIGGF~~~waAs~----------YPdVkavvLDAtF 344 (517)
T KOG1553|consen 305 VL----GFRQEDIILYGWSIGGFPVAWAASN----------YPDVKAVVLDATF 344 (517)
T ss_pred Hc----CCCccceEEEEeecCCchHHHHhhc----------CCCceEEEeecch
Confidence 44 5667799999999999877766643 3478999984443
No 157
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=65.17 E-value=17 Score=34.20 Aligned_cols=62 Identities=18% Similarity=0.349 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
.+.+++++.|++.++.. +. -....+-|. |||..-|.-+..+.. ..++.|+.+|.+.+++...
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~-------~~~vDG~LVG~Asl~~~~f 241 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMA-------QPDIDGALVGGASLKAEDF 241 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhc-------CCCCCEEEEeeeeechHHH
Confidence 35667788999988863 32 112334444 999999998887764 3478999999999988654
No 158
>PLN02310 triacylglycerol lipase
Probab=64.41 E-value=14 Score=37.10 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHhhCccc-CCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 136 EAANDLTTLLMELFNKNEIL-QKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 136 ~~a~~~~~fl~~f~~~~p~~-~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
.+.+++...+++..+.+++- ....+.|+|||.||-.+-..|..|... ...+++.-+..|.|-+.-
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~----~~~~~v~vyTFGsPRVGN 251 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATT----IPDLFVSVISFGAPRVGN 251 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHh----CcCcceeEEEecCCCccc
Confidence 34455666666666655431 234799999999998876666555331 123456667777776653
No 159
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=64.17 E-value=23 Score=37.05 Aligned_cols=85 Identities=8% Similarity=-0.006 Sum_probs=49.7
Q ss_pred ccccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhC
Q 018274 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (358)
Q Consensus 107 ~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~ 186 (358)
-+.++-||-+ |-|.|.... .-++-+.+.+.+++..+.+.. ...+++++|+|.||..+...+..+...
T Consensus 220 Gf~V~~iDwr-gpg~s~~~~-----~~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~---- 286 (532)
T TIGR01838 220 GHTVFVISWR-NPDASQADK-----TFDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAAR---- 286 (532)
T ss_pred CcEEEEEECC-CCCcccccC-----ChhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHh----
Confidence 4577778977 888774321 112223344666666655433 356899999999998765422222211
Q ss_pred cceeeeeeeeccCccCCh
Q 018274 187 KLKLKLGGVALGDSWISP 204 (358)
Q Consensus 187 ~~~inlkGi~iGng~i~p 204 (358)
...-.++++++-+..+|.
T Consensus 287 ~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 287 GDDKRIKSATFFTTLLDF 304 (532)
T ss_pred CCCCccceEEEEecCcCC
Confidence 111247888877766664
No 160
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=63.63 E-value=5.4 Score=37.33 Aligned_cols=63 Identities=17% Similarity=0.343 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
.+.++..+.+++.++.. +.....+.+-|. |||..-|.-+..+.. .-++.|+.||.+-++|..+
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~-------~~~iDG~LVG~asl~~~~F 240 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLS-------QPDIDGVLVGGASLKAESF 240 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHT-------STT-SEEEESGGGGSTHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhc-------CCCCCEEEEchhhhcccch
Confidence 45667788888888754 222222233333 899988988887764 2478999999999998754
No 161
>PLN02561 triosephosphate isomerase
Probab=63.29 E-value=13 Score=34.94 Aligned_cols=60 Identities=17% Similarity=0.248 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
.+.+++++.+++.++.+ +.......+-|. |||..-|.-+..+.. ..++.|+.||.+-+||
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~-------~~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAA-------QPDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhc-------CCCCCeEEEehHhhHH
Confidence 34566778888888753 332223344444 999999998888764 3479999999999997
No 162
>COG1647 Esterase/lipase [General function prediction only]
Probab=63.26 E-value=29 Score=32.19 Aligned_cols=101 Identities=20% Similarity=0.151 Sum_probs=57.7
Q ss_pred EEEEEcCCCChhhh--hhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHHHH
Q 018274 69 IILWLQGGPGASGV--GIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (358)
Q Consensus 69 lilwl~GGPG~ss~--~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~ 146 (358)
-+|.|||=-|.++= .+|-+. |+..|+=.|--+ | |.|-.-..=-...+.+--+-+.|-++.|+
T Consensus 17 AVLllHGFTGt~~Dvr~Lgr~L-----------~e~GyTv~aP~y----p-GHG~~~e~fl~t~~~DW~~~v~d~Y~~L~ 80 (243)
T COG1647 17 AVLLLHGFTGTPRDVRMLGRYL-----------NENGYTVYAPRY----P-GHGTLPEDFLKTTPRDWWEDVEDGYRDLK 80 (243)
T ss_pred EEEEEeccCCCcHHHHHHHHHH-----------HHCCceEecCCC----C-CCCCCHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 68999998888873 023222 444555333222 4 77754321001112333344555555555
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
. -.-..++++|-|.||-+.-.+|.. .++|+|+.=.+-+.
T Consensus 81 ~-------~gy~eI~v~GlSmGGv~alkla~~-----------~p~K~iv~m~a~~~ 119 (243)
T COG1647 81 E-------AGYDEIAVVGLSMGGVFALKLAYH-----------YPPKKIVPMCAPVN 119 (243)
T ss_pred H-------cCCCeEEEEeecchhHHHHHHHhh-----------CCccceeeecCCcc
Confidence 1 123579999999999877666653 47899887554443
No 163
>PRK14565 triosephosphate isomerase; Provisional
Probab=62.62 E-value=17 Score=33.97 Aligned_cols=56 Identities=20% Similarity=0.260 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 134 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
+.+.+++.+.+++.+. .++-|. |||..-|.-+..+.+ .-++.|+.||.+.++|...
T Consensus 172 ~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~-------~~~iDG~LvG~asl~~~~f 227 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKS-------INQLSGVLVGSASLDVDSF 227 (237)
T ss_pred CHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhc-------CCCCCEEEEechhhcHHHH
Confidence 3455777888888762 123333 999999998888765 2368999999999998764
No 164
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=62.36 E-value=10 Score=34.42 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=26.6
Q ss_pred HHHhhCcccCCCCEEEEecccccchhhhhHHHH
Q 018274 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (358)
Q Consensus 147 ~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i 179 (358)
+|++.+|+-..+++-|.|-|.||-.+-.+|...
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~ 43 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRF 43 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC
Confidence 477789999889999999999998887777654
No 165
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=62.25 E-value=13 Score=32.83 Aligned_cols=81 Identities=15% Similarity=0.181 Sum_probs=50.4
Q ss_pred cccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHH--HHHHHHhCc
Q 018274 110 LLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA--AVKAIEAGK 187 (358)
Q Consensus 110 ~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~--i~~~~~~~~ 187 (358)
+--|+-|+..+.. .+..+..+.+.++...++.+..+-| +.++.|.|-|-|+..+-..+.. +...
T Consensus 42 ~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~----- 107 (179)
T PF01083_consen 42 VQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPD----- 107 (179)
T ss_dssp EEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHH-----
T ss_pred EEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChh-----
Confidence 3335566555542 2455777888889999999999988 4699999999999876665544 1110
Q ss_pred ceeeeeee-eccCccCCh
Q 018274 188 LKLKLGGV-ALGDSWISP 204 (358)
Q Consensus 188 ~~inlkGi-~iGng~i~p 204 (358)
..-++.++ .+|||.-.+
T Consensus 108 ~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 108 VADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHEEEEEEES-TTTBT
T ss_pred hhhhEEEEEEecCCcccC
Confidence 11256665 578887643
No 166
>PRK07868 acyl-CoA synthetase; Validated
Probab=61.69 E-value=23 Score=39.76 Aligned_cols=90 Identities=13% Similarity=0.094 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccc----ccc-ccccccccCCcccccccccCCCCcccchHHHHHH
Q 018274 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNST----WLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAAND 140 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~s----w~~-~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~ 140 (358)
..|.||++||-+..+.++ -+ .+ +.| ..+ ...++-+| .|.|..... ....+.++.+..
T Consensus 66 ~~~plllvhg~~~~~~~~-d~-----------~~-~~s~v~~L~~~g~~v~~~d----~G~~~~~~~-~~~~~l~~~i~~ 127 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMW-DV-----------TR-DDGAVGILHRAGLDPWVID----FGSPDKVEG-GMERNLADHVVA 127 (994)
T ss_pred CCCcEEEECCCCCCccce-ec-----------CC-cccHHHHHHHCCCEEEEEc----CCCCChhHc-CccCCHHHHHHH
Confidence 348899999987666552 11 00 111 112 24667777 244432211 112233333344
Q ss_pred HHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHH
Q 018274 141 LTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (358)
Q Consensus 141 ~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~ 177 (358)
+.++|..-- +....+++++|+|+||..+-.+|.
T Consensus 128 l~~~l~~v~----~~~~~~v~lvG~s~GG~~a~~~aa 160 (994)
T PRK07868 128 LSEAIDTVK----DVTGRDVHLVGYSQGGMFCYQAAA 160 (994)
T ss_pred HHHHHHHHH----HhhCCceEEEEEChhHHHHHHHHH
Confidence 444443211 122358999999999988766654
No 167
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=60.43 E-value=23 Score=33.15 Aligned_cols=61 Identities=20% Similarity=0.371 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 136 EAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 136 ~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
+.+++.+.+++.++.. +.+ ....+-|. |||..-|.-+..+.+. -++.|+.+|.+.+++...
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~-------~~vDG~LVG~Asl~~~~f 237 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQ-------PDIDGVLVGGASLKAESF 237 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcC-------CCCCEEEeehHhhCHHHH
Confidence 4566788888888864 332 23344444 9999999888777642 258999999999987654
No 168
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=58.92 E-value=20 Score=38.13 Aligned_cols=112 Identities=19% Similarity=0.239 Sum_probs=59.3
Q ss_pred CCCCCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCcccccccc----------ccccccCCcccccc---ccc--C
Q 018274 62 NPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKA----------DLLFVDNPVGTGYS---YVE--D 126 (358)
Q Consensus 62 ~~~~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~----------~~l~iDqPvG~GfS---~~~--~ 126 (358)
+|-+..|+++++-||||.--. -|.++|.+.. -|++||.. |+-.- +.. .
T Consensus 637 ~pgkkYptvl~VYGGP~VQlV----------------nnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~hRGlkFE~~ik 699 (867)
T KOG2281|consen 637 QPGKKYPTVLNVYGGPGVQLV----------------NNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAHRGLKFESHIK 699 (867)
T ss_pred CCCCCCceEEEEcCCCceEEe----------------eccccceehhhhhhhhhcceEEEEEcCC-CccccchhhHHHHh
Confidence 454567999999999987643 2666666533 46889977 54211 100 0
Q ss_pred -CCCcccchHHHHHHHHHHHHHHHhhCcccC-CCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 127 -NSSFVKNDVEAANDLTTLLMELFNKNEILQ-KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 127 -~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~-~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
.=+.+.-++ -++-||-.-++.. |- -..+-|-|-||||...- ..+.+ ..+ -++-.|-|.|.++-
T Consensus 700 ~kmGqVE~eD-----QVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSl----m~L~~----~P~-IfrvAIAGapVT~W 764 (867)
T KOG2281|consen 700 KKMGQVEVED-----QVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSL----MGLAQ----YPN-IFRVAIAGAPVTDW 764 (867)
T ss_pred hccCeeeehh-----hHHHHHHHHHhcC-cccchheeEeccccccHHHH----HHhhc----Ccc-eeeEEeccCcceee
Confidence 001122122 2233332222222 32 34689999999995432 22211 111 25666667777764
Q ss_pred h
Q 018274 205 E 205 (358)
Q Consensus 205 ~ 205 (358)
.
T Consensus 765 ~ 765 (867)
T KOG2281|consen 765 R 765 (867)
T ss_pred e
Confidence 4
No 169
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=57.99 E-value=18 Score=32.16 Aligned_cols=63 Identities=19% Similarity=0.155 Sum_probs=38.3
Q ss_pred ccccccccc--CCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhh
Q 018274 106 KKADLLFVD--NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (358)
Q Consensus 106 ~~~~~l~iD--qPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~ 175 (358)
+.+-|.|++ .|.+...+-. ...--+..|.+|..|++.+=..+ -....+-++|||||+.-+-.-
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~-----~~~~A~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A 126 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAA-----SPGYARAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLA 126 (177)
T ss_pred CeEEEEEcCCCCCCCcccccc-----CchHHHHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHH
Confidence 566777875 4422222211 12224567777888888766666 113579999999998765443
No 170
>PLN03037 lipase class 3 family protein; Provisional
Probab=57.55 E-value=27 Score=36.30 Aligned_cols=66 Identities=18% Similarity=0.221 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhhCccc-CCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 137 AANDLTTLLMELFNKNEIL-QKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 137 ~a~~~~~fl~~f~~~~p~~-~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
+.+++..-+++..+.+++. ....++|+|||.||-.+-..|..|...... ..++.-+..|.|-+...
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~---~~~VtvyTFGsPRVGN~ 362 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA---LSNISVISFGAPRVGNL 362 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC---CCCeeEEEecCCCccCH
Confidence 3345556666666666542 234799999999998877766665442111 11445566666665543
No 171
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=57.46 E-value=6.6 Score=35.28 Aligned_cols=15 Identities=40% Similarity=0.895 Sum_probs=12.9
Q ss_pred CCCEEEEEcCCCChh
Q 018274 66 PWPIILWLQGGPGAS 80 (358)
Q Consensus 66 ~~Plilwl~GGPG~s 80 (358)
+.|-|||+=|||||-
T Consensus 6 ~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 6 DKPPIIFVLGGPGSG 20 (195)
T ss_pred cCCCEEEEEcCCCCC
Confidence 358999999999985
No 172
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=55.59 E-value=19 Score=33.86 Aligned_cols=64 Identities=17% Similarity=0.010 Sum_probs=34.1
Q ss_pred chHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccC
Q 018274 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i 202 (358)
+..+.|+-+...|+..- .+|.=+.+-++|||+||.-+ ..++.+.-.....+--=|=|.||.|+-
T Consensus 81 ~~~~qa~wl~~vl~~L~---~~Y~~~~~N~VGHSmGg~~~---~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLK---KKYHFKKFNLVGHSMGGLSW---TYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHHHHHHH---HCC--SEEEEEEETHHHHHH---HHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred CHHHHHHHHHHHHHHHH---HhcCCCEEeEEEECccHHHH---HHHHHHhccCCCCcccceEEEeccccC
Confidence 55666776666666533 35556789999999999644 334433212222221234556776653
No 173
>PTZ00333 triosephosphate isomerase; Provisional
Probab=54.79 E-value=22 Score=33.46 Aligned_cols=61 Identities=16% Similarity=0.293 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 134 DVEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 134 ~~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
+.+.+++++.++++++.. +.......+-|. |||..-|.-+..+.. ..++.|+.||.+.+++
T Consensus 181 ~~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~-------~~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 181 TPEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIK-------QPDIDGFLVGGASLKP 242 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhc-------CCCCCEEEEehHhhhh
Confidence 445677788999988763 322222334444 999999998888764 3478999999998874
No 174
>COG3150 Predicted esterase [General function prediction only]
Probab=54.77 E-value=22 Score=31.54 Aligned_cols=60 Identities=22% Similarity=0.338 Sum_probs=43.4
Q ss_pred cccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhhh
Q 018274 130 FVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFV 208 (358)
Q Consensus 130 ~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q~ 208 (358)
.+....++++.+...++ +...+..-|+|-|-||.|+-.|+.+ +-|+.++ -||-+-|...+
T Consensus 38 l~h~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~~-----------~Girav~-~NPav~P~e~l 97 (191)
T COG3150 38 LPHDPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGFL-----------CGIRAVV-FNPAVRPYELL 97 (191)
T ss_pred CCCCHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHHH-----------hCChhhh-cCCCcCchhhh
Confidence 45677888888888887 5556678999999999998777654 2345544 48887776543
No 175
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=54.31 E-value=11 Score=30.12 Aligned_cols=25 Identities=36% Similarity=0.371 Sum_probs=12.5
Q ss_pred chhhHHHHHHHHHHHHhhcchhhhhc
Q 018274 3 KLCGFVATLLFLVSLLFNGGAAARAL 28 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (358)
|.+++++|+| .+++|++..|+|+..
T Consensus 4 K~~llL~l~L-A~lLlisSevaa~~~ 28 (95)
T PF07172_consen 4 KAFLLLGLLL-AALLLISSEVAAREL 28 (95)
T ss_pred hHHHHHHHHH-HHHHHHHhhhhhHHh
Confidence 4444444433 455566666666444
No 176
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=53.95 E-value=18 Score=34.59 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=31.5
Q ss_pred chHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccc
Q 018274 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGK 170 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~ 170 (358)
.-.++++.|.+.+.......|+-..-++|++|||-|..
T Consensus 84 ~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 84 AAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 35667888999999999999987666799999999854
No 177
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.43 E-value=26 Score=34.69 Aligned_cols=47 Identities=23% Similarity=0.363 Sum_probs=32.5
Q ss_pred CCCEEEEecccccchhhhhHHHHHHHH--HhCc-ceeeeeeeeccCccCChhhh
Q 018274 157 KSPLFIVAESYGGKFAATLGLAAVKAI--EAGK-LKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 157 ~~~~~i~GeSYgG~yvp~~a~~i~~~~--~~~~-~~inlkGi~iGng~i~p~~q 207 (358)
-.++||..||+|+.-+- +.++++ +..+ ....++-+++-.+-+|-..+
T Consensus 190 ~~~I~ilAHSMGtwl~~----e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF 239 (377)
T COG4782 190 VKRIYLLAHSMGTWLLM----EALRQLAIRADRPLPAKIKNVILAAPDIDVDVF 239 (377)
T ss_pred CceEEEEEecchHHHHH----HHHHHHhccCCcchhhhhhheEeeCCCCChhhH
Confidence 46799999999975433 333333 2333 56788999999998886543
No 178
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=53.22 E-value=11 Score=26.07 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=16.1
Q ss_pred CcchhhHHHHHHHHHHHHhhcc
Q 018274 1 MEKLCGFVATLLFLVSLLFNGG 22 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (358)
|||.+..+..++++.++|.+|-
T Consensus 2 mKk~i~~i~~~l~~~~~l~~Cn 23 (48)
T PRK10081 2 VKKTIAAIFSVLVLSTVLTACN 23 (48)
T ss_pred hHHHHHHHHHHHHHHHHHhhhh
Confidence 7887777666666777788885
No 179
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=52.15 E-value=26 Score=37.53 Aligned_cols=63 Identities=16% Similarity=0.308 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
.+.+++.+.+++.++.. +.......+=|. |||.--|.-+..|.. .-++.|+.||..-++|..+
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~-------~~diDG~LVGgASL~~~~F 637 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFN-------QPDIDGGLVGGASLKAQEF 637 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhc-------CCCCCeEEeehHhcCHHHH
Confidence 46777899999999864 322212233333 999999999988865 2379999999999998754
No 180
>KOG3101 consensus Esterase D [General function prediction only]
Probab=50.80 E-value=17 Score=33.62 Aligned_cols=41 Identities=24% Similarity=0.145 Sum_probs=25.3
Q ss_pred CCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 158 SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 158 ~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
.+.-|+|||+|||=+-.++.+- .-..|++.--.|..+|...
T Consensus 141 ~k~~IfGHSMGGhGAl~~~Lkn---------~~kykSvSAFAPI~NP~~c 181 (283)
T KOG3101|consen 141 LKVGIFGHSMGGHGALTIYLKN---------PSKYKSVSAFAPICNPINC 181 (283)
T ss_pred hhcceeccccCCCceEEEEEcC---------cccccceeccccccCcccC
Confidence 3688999999999654444321 1145666655566666543
No 181
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=48.85 E-value=53 Score=31.33 Aligned_cols=67 Identities=19% Similarity=0.090 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHhhCcc--c-CCCCEEEEecccccchhhhhHHHHHHHHHhCcceee--eeeeeccCccCChhhh
Q 018274 137 AANDLTTLLMELFNKNEI--L-QKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLK--LGGVALGDSWISPEDF 207 (358)
Q Consensus 137 ~a~~~~~fl~~f~~~~p~--~-~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~in--lkGi~iGng~i~p~~q 207 (358)
.+..+++.++.-.+..+. . .+.++.|+|.|=||+=. ..|.++... -...++ |.|.+.|.+..|....
T Consensus 47 ~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~---YApeL~~~l~Gaa~gg~~~dl~~~ 118 (290)
T PF03583_consen 47 EAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPS---YAPELNRDLVGAAAGGPPADLAAL 118 (290)
T ss_pred HHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHH---hCcccccceeEEeccCCccCHHHH
Confidence 334444444443333332 2 36799999999998733 333333221 123577 9999999988776543
No 182
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=48.51 E-value=4.2 Score=41.50 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=21.4
Q ss_pred HHHHHHHhhCcccCCCCEEEEecccccchhhhh
Q 018274 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (358)
Q Consensus 143 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~ 175 (358)
+++++....|.-- .+++-|+|||-||.-|-.+
T Consensus 194 ~WV~~nI~~FGGD-p~~VTl~G~SAGa~sv~~~ 225 (535)
T PF00135_consen 194 KWVQDNIAAFGGD-PDNVTLFGQSAGAASVSLL 225 (535)
T ss_dssp HHHHHHGGGGTEE-EEEEEEEEETHHHHHHHHH
T ss_pred HHHHhhhhhcccC-Ccceeeeeeccccccccee
Confidence 5666655555432 3469999999998765443
No 183
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=47.55 E-value=14 Score=33.60 Aligned_cols=58 Identities=19% Similarity=0.135 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChh
Q 018274 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~ 205 (358)
+-..+++..+|++-| +-...+ ..|+|.|+||.-+-.+|.+- +=.+.+++.-+|.++|.
T Consensus 96 ~~l~~el~p~i~~~~---~~~~~~-~~i~G~S~GG~~Al~~~l~~---------Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 96 TFLTEELIPYIEANY---RTDPDR-RAIAGHSMGGYGALYLALRH---------PDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHTHHHHHHHHHS---SEEECC-EEEEEETHHHHHHHHHHHHS---------TTTESEEEEESEESETT
T ss_pred eehhccchhHHHHhc---ccccce-eEEeccCCCcHHHHHHHHhC---------ccccccccccCcccccc
Confidence 445666777777644 333233 99999999998765555431 22578888888887765
No 184
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=47.43 E-value=39 Score=33.71 Aligned_cols=41 Identities=27% Similarity=0.288 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHH
Q 018274 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i 179 (358)
++.+..+...++.-++.. ++|+.|+|||+||.++-.+-...
T Consensus 100 ~~~~~~lk~~ie~~~~~~----~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 100 DEYFTKLKQLIEEAYKKN----GKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHHHHHhc----CCcEEEEEeCCCchHHHHHHHhc
Confidence 344455555555544332 67999999999998765554443
No 185
>COG0149 TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=46.72 E-value=52 Score=30.99 Aligned_cols=70 Identities=19% Similarity=0.364 Sum_probs=49.7
Q ss_pred cccccccccCCCCcccchHHHHHHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeee
Q 018274 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGV 195 (358)
Q Consensus 117 vG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi 195 (358)
+|||.|- +.+.++.++.|++..... +.+- ..+-|. |||-.=|.=+.++.. ..++.|+
T Consensus 171 IGTG~~a----------t~~~a~~v~~~Ir~~~~~~~~~~--~~v~Il---YGGSV~~~N~~e~~~-------~~~idG~ 228 (251)
T COG0149 171 IGTGKSA----------SPADAEEVHAFIRAVLAELFGAE--EKVRIL---YGGSVKPGNAAELAA-------QPDIDGA 228 (251)
T ss_pred hcCCCCC----------CHHHHHHHHHHHHHHHHHhcCCC--CCeEEE---EeCCcChhHHHHHhc-------CCCCCeE
Confidence 7999664 234567788888888765 3332 345554 888888877776654 3578999
Q ss_pred eccCccCChhhhh
Q 018274 196 ALGDSWISPEDFV 208 (358)
Q Consensus 196 ~iGng~i~p~~q~ 208 (358)
.||.+-+++.++.
T Consensus 229 LVGgAslka~~f~ 241 (251)
T COG0149 229 LVGGASLKADDFL 241 (251)
T ss_pred EEcceeecchhHH
Confidence 9999999987654
No 186
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=45.95 E-value=59 Score=33.61 Aligned_cols=33 Identities=9% Similarity=0.009 Sum_probs=22.0
Q ss_pred HHHHHHHhhCcccCCCCEEEEecccccchhhhhH
Q 018274 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (358)
Q Consensus 143 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a 176 (358)
++++.....|.. ..+++-|+|||.||..+-.+.
T Consensus 181 ~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 181 RWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 555555544442 245799999999998775543
No 187
>PRK15492 triosephosphate isomerase; Provisional
Probab=45.50 E-value=45 Score=31.54 Aligned_cols=62 Identities=15% Similarity=0.233 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
.+.+++.+.++++++.. +.+- ...+-|. |||..-|.-+..+.. .-++.|+.||..-++|+.+
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~-------~~diDG~LvG~aSl~~~~F 250 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFG-------QPHIDGLFIGRSAWDADKF 250 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhc-------CCCCCEEEeehhhcCHHHH
Confidence 34557788899988653 3222 2345555 999999999988865 2379999999999998765
No 188
>PRK13792 lysozyme inhibitor; Provisional
Probab=45.42 E-value=12 Score=31.42 Aligned_cols=23 Identities=22% Similarity=0.225 Sum_probs=16.7
Q ss_pred CcchhhHHHHHHHHHHHHhhcchhh
Q 018274 1 MEKLCGFVATLLFLVSLLFNGGAAA 25 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ 25 (358)
|||. ++++++.++++|.|||..+
T Consensus 1 mk~~--l~~ll~~~~~lLsaCs~~~ 23 (127)
T PRK13792 1 MKKA--LWLLLAAVPVVLVACGGSD 23 (127)
T ss_pred ChhH--HHHHHHHHHhheecccCCC
Confidence 8865 5666666777899999554
No 189
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=45.12 E-value=89 Score=32.18 Aligned_cols=52 Identities=15% Similarity=0.229 Sum_probs=42.9
Q ss_pred HHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 143 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
..++.||.+-|++ -|..|-|=||+-.-..|++..+ .+.||+.|.|-++-..+
T Consensus 104 ~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~---------dfDGIlAgaPA~~~~~~ 155 (474)
T PF07519_consen 104 ALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPE---------DFDGILAGAPAINWTHL 155 (474)
T ss_pred HHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChh---------hcCeEEeCCchHHHHHH
Confidence 6788999888875 8999999999988777776654 58999999998876543
No 190
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=44.16 E-value=18 Score=32.27 Aligned_cols=42 Identities=21% Similarity=0.342 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhH
Q 018274 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (358)
Q Consensus 134 ~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a 176 (358)
.+.+.+++..++ .++...|+....++-++|-|+||+++-.+|
T Consensus 75 ~~~~~~~~~aa~-~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 75 PEQVAADLQAAV-DYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHHHHHHHHHH-HHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 345566664555 456667755567899999999998865544
No 191
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=42.34 E-value=64 Score=32.69 Aligned_cols=88 Identities=20% Similarity=0.100 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHH
Q 018274 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (358)
Q Consensus 65 ~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~f 144 (358)
.++|+|+...| +++.. .|.+ .+-+=.=.+|.|+|+.. =-|=|.....+-..-+..++|.|.++.
T Consensus 61 ~drPtV~~T~G--------Y~~~~--~p~r-----~Ept~Lld~NQl~vEhR-fF~~SrP~p~DW~~Lti~QAA~D~Hri 124 (448)
T PF05576_consen 61 FDRPTVLYTEG--------YNVST--SPRR-----SEPTQLLDGNQLSVEHR-FFGPSRPEPADWSYLTIWQAASDQHRI 124 (448)
T ss_pred CCCCeEEEecC--------ccccc--Cccc-----cchhHhhccceEEEEEe-eccCCCCCCCCcccccHhHhhHHHHHH
Confidence 46799988875 22221 2222 23334446799999976 444465544344456899999999999
Q ss_pred HHHHHhhCcccCCCCEEEEecccccchh
Q 018274 145 LMELFNKNEILQKSPLFIVAESYGGKFA 172 (358)
Q Consensus 145 l~~f~~~~p~~~~~~~~i~GeSYgG~yv 172 (358)
.+.|=..+|+ ++.-+|-|=||.-.
T Consensus 125 ~~A~K~iY~~----kWISTG~SKGGmTa 148 (448)
T PF05576_consen 125 VQAFKPIYPG----KWISTGGSKGGMTA 148 (448)
T ss_pred HHHHHhhccC----CceecCcCCCceeE
Confidence 9987555553 69999999999743
No 192
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=42.32 E-value=34 Score=35.03 Aligned_cols=41 Identities=10% Similarity=0.152 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHH
Q 018274 139 NDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAA 179 (358)
Q Consensus 139 ~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i 179 (358)
++.+.-|+..++. +.....+|+.|++||+||.|+-.|-...
T Consensus 162 d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 162 DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 3344445555554 2333348999999999999988776544
No 193
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=40.73 E-value=24 Score=33.60 Aligned_cols=34 Identities=32% Similarity=0.311 Sum_probs=23.4
Q ss_pred CCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeec
Q 018274 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (358)
Q Consensus 157 ~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~i 197 (358)
-.++-++|||-||+-+=++|.... ..+++..++-
T Consensus 119 l~klal~GHSrGGktAFAlALg~a-------~~lkfsaLIG 152 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYA-------TSLKFSALIG 152 (307)
T ss_pred cceEEEeecCCccHHHHHHHhccc-------ccCchhheec
Confidence 458999999999998766665332 2445555554
No 194
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=40.59 E-value=15 Score=36.60 Aligned_cols=38 Identities=21% Similarity=0.319 Sum_probs=21.3
Q ss_pred CEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhh
Q 018274 159 PLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (358)
Q Consensus 159 ~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~ 206 (358)
++.++||||||--+-..+ .+ ...++..++-|||.-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l---~~-------d~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQAL---RQ-------DTRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHH---HH--------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHH---hh-------ccCcceEEEeCCcccCCC
Confidence 689999999995433222 11 135678888899988854
No 195
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=39.97 E-value=31 Score=31.33 Aligned_cols=62 Identities=19% Similarity=0.210 Sum_probs=38.7
Q ss_pred ccccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHH
Q 018274 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (358)
Q Consensus 109 ~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~ 178 (358)
..|-.|-. |+|-|.+.-+.+ ..+.+-|+...++++. +||.- .-+.+.|-|+|+-.+..+|.+
T Consensus 62 atlRfNfR-gVG~S~G~fD~G--iGE~~Da~aaldW~~~---~hp~s--~~~~l~GfSFGa~Ia~~la~r 123 (210)
T COG2945 62 ATLRFNFR-GVGRSQGEFDNG--IGELEDAAAALDWLQA---RHPDS--ASCWLAGFSFGAYIAMQLAMR 123 (210)
T ss_pred eEEeeccc-ccccccCcccCC--cchHHHHHHHHHHHHh---hCCCc--hhhhhcccchHHHHHHHHHHh
Confidence 34445545 999998764332 3444445545566664 67753 236999999998766665554
No 196
>PRK10259 hypothetical protein; Provisional
Probab=38.33 E-value=35 Score=26.68 Aligned_cols=44 Identities=18% Similarity=0.139 Sum_probs=27.0
Q ss_pred CcchhhHHHHHHHHHHHHhhcchhhhhcCCCCCCcceeeEEEecC
Q 018274 1 MEKLCGFVATLLFLVSLLFNGGAAARALNKNQDASEEWGYVEVRP 45 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~v~~ 45 (358)
||++..+++.++|.++. |+..||.-+........+.-|.|.|..
T Consensus 1 Mk~ik~~~aa~~ls~~S-f~a~AA~~i~~~q~~~l~kiG~VSvsg 44 (86)
T PRK10259 1 MKTINTVVAAMALSTLS-FGVFAAEPVTASQAQNMNKIGVVSADG 44 (86)
T ss_pred CchHHHHHHHHHHHHhh-hhhcchhhhChHHhcCCCcceEEEEec
Confidence 88888888887765553 333333333333344556778888863
No 197
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=37.66 E-value=29 Score=33.29 Aligned_cols=121 Identities=16% Similarity=0.105 Sum_probs=61.6
Q ss_pred CCCEEEEEcC-CCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCC-CCcccchHHHHHHHHH
Q 018274 66 PWPIILWLQG-GPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN-SSFVKNDVEAANDLTT 143 (358)
Q Consensus 66 ~~Plilwl~G-GPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~-~~~~~~~~~~a~~~~~ 143 (358)
.+|.+|=+|- |.-.-|-.-++|. .+.-....+++-++-||-| |-..--..-+ +.-..+.++.|+++..
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~---------~~~m~~i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~LAe~l~~ 91 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFN---------FEDMQEILQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQLAEMLPE 91 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHC---------SHHHHHHHTTSEEEEEE-T-TTSTT-----TT-----HHHHHCTHHH
T ss_pred CCceEEEeccccccchHHHHHHhc---------chhHHHHhhceEEEEEeCC-CCCCCcccccccccccCHHHHHHHHHH
Confidence 4688888885 4444441023442 1122345667888999988 7664333222 2235678999998877
Q ss_pred HHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhhhhhhhhhhh
Q 018274 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFVFSWGPLLK 216 (358)
Q Consensus 144 fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q~~~~~~~~~ 216 (358)
.|+. |+=+.+.-+|+--|.-....+|..- +-.+-|+++-|+. ....+|.+.++
T Consensus 92 Vl~~-------f~lk~vIg~GvGAGAnIL~rfAl~~---------p~~V~GLiLvn~~----~~~~gw~Ew~~ 144 (283)
T PF03096_consen 92 VLDH-------FGLKSVIGFGVGAGANILARFALKH---------PERVLGLILVNPT----CTAAGWMEWFY 144 (283)
T ss_dssp HHHH-------HT---EEEEEETHHHHHHHHHHHHS---------GGGEEEEEEES-------S---HHHHHH
T ss_pred HHHh-------CCccEEEEEeeccchhhhhhccccC---------ccceeEEEEEecC----CCCccHHHHHH
Confidence 7763 2335688899998877777766432 2258899995543 33344454443
No 198
>TIGR00547 lolA periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself.
Probab=37.18 E-value=77 Score=28.70 Aligned_cols=19 Identities=21% Similarity=0.426 Sum_probs=11.5
Q ss_pred eeEEEecCCceEEEEEEEcC
Q 018274 38 WGYVEVRPKAHMFWWLYKSP 57 (358)
Q Consensus 38 ~Gy~~v~~~~~~f~~~~~~~ 57 (358)
+|-+.+.. .++|.|-|+.+
T Consensus 58 ~G~~~~kr-P~~frW~~~~P 76 (204)
T TIGR00547 58 QGDLQIKR-PNLFNMEMKQP 76 (204)
T ss_pred EEEEEEeC-CCeEEEEEcCC
Confidence 35444432 46889988753
No 199
>TIGR03656 IsdC heme uptake protein IsdC. Isd proteins are iron-regulated surface proteins found in Bacillus, Staphylococcus and Listeria species and are responsible for heme scavenging from hemoproteins. The IsdC protein consists of an N-terminal hydrophobic signal sequence, a central NEAT (NEAr Transporter, pfam05031) domain which confers the ability to bind heme and a C-terminal SrtB processing signal which targets the protein to the cell wall. IsdC is believed to make a direct contact with, and transfer heme to, the heme-binding component (IsdE) of an ABC transporter in the cytoplasmic membrane, and to receive heme from other NEAT-containing heme-binding proteins also localized in the cell wall.
Probab=36.96 E-value=23 Score=32.48 Aligned_cols=29 Identities=21% Similarity=0.224 Sum_probs=20.1
Q ss_pred CcchhhHHHHHHHHHHHHhhcchhhhhcC
Q 018274 1 MEKLCGFVATLLFLVSLLFNGGAAARALN 29 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (358)
|||++.++.+++++.+.+...+++|++..
T Consensus 1 mk~~~~~~~~~~~~~f~~~~~~~~~~~~L 29 (217)
T TIGR03656 1 MKKILVFAFFTTILAFIILSAGFSNSANL 29 (217)
T ss_pred CcchhhHHHHHHHHHHhcccccccccccc
Confidence 89988887777767766666666654433
No 200
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=36.07 E-value=59 Score=29.57 Aligned_cols=54 Identities=9% Similarity=0.118 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 136 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
+.+++++.+++ +- .+. ..++-|. |||..-|.-+..+.. ...+.|+.+|.+.++|
T Consensus 151 ~~~~~v~~~ir-~~---~~~-~~~~~Il---YGGSV~~~N~~~l~~-------~~~iDG~LvG~Asl~a 204 (205)
T TIGR00419 151 AQPEVVHGSVR-AV---KEV-NESVRVL---CGAGISTGEDAELAA-------QLGAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHHH-hh---hhh-cCCceEE---EeCCCCHHHHHHHhc-------CCCCCEEEEeeeeecC
Confidence 45666778887 21 111 1233343 999999988887764 3478999999998875
No 201
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=35.83 E-value=31 Score=29.04 Aligned_cols=15 Identities=27% Similarity=0.518 Sum_probs=12.7
Q ss_pred CCCEEEEEcCCCChh
Q 018274 66 PWPIILWLQGGPGAS 80 (358)
Q Consensus 66 ~~Plilwl~GGPG~s 80 (358)
++||||=|||.||+.
T Consensus 51 ~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCEEEEeecCCCCc
Confidence 459999999998865
No 202
>PLN02606 palmitoyl-protein thioesterase
Probab=35.62 E-value=1.9e+02 Score=28.12 Aligned_cols=43 Identities=26% Similarity=0.090 Sum_probs=30.4
Q ss_pred CcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhH
Q 018274 129 SFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (358)
Q Consensus 129 ~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a 176 (358)
.+..+..++++.+.+-|+. .|++. .-+.+.|.|-||...=.++
T Consensus 71 s~~~~~~~Qv~~vce~l~~----~~~L~-~G~naIGfSQGglflRa~i 113 (306)
T PLN02606 71 SLFMPLRQQASIACEKIKQ----MKELS-EGYNIVAESQGNLVARGLI 113 (306)
T ss_pred ccccCHHHHHHHHHHHHhc----chhhc-CceEEEEEcchhHHHHHHH
Confidence 3445667777878888774 56653 4699999999997644433
No 203
>COG4425 Predicted membrane protein [Function unknown]
Probab=35.42 E-value=47 Score=34.00 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=33.5
Q ss_pred ccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccc
Q 018274 131 VKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGK 170 (358)
Q Consensus 131 ~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~ 170 (358)
+..-.++|+.+.+.+-.+...-|+-..-++|+.|||-|..
T Consensus 370 pdyg~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 370 PDYGADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred CCcchhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 3445678899999999999999998777899999999854
No 204
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=34.26 E-value=81 Score=32.59 Aligned_cols=105 Identities=23% Similarity=0.281 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCCcccchHHHHHHHHHH
Q 018274 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (358)
Q Consensus 65 ~~~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~f 144 (358)
++ ||.+.+.|==.+-+. .|.|+-.+ ...-=|||=|..+--|-=|. +.++.-+.+.+.
T Consensus 288 KP-PL~VYFSGyR~aEGF-Egy~MMk~-------------Lg~PfLL~~DpRleGGaFYl--------Gs~eyE~~I~~~ 344 (511)
T TIGR03712 288 KP-PLNVYFSGYRPAEGF-EGYFMMKR-------------LGAPFLLIGDPRLEGGAFYL--------GSDEYEQGIINV 344 (511)
T ss_pred CC-CeEEeeccCcccCcc-hhHHHHHh-------------cCCCeEEeeccccccceeee--------CcHHHHHHHHHH
Confidence 45 999999995555554 34443100 01113677786766552232 222222334444
Q ss_pred HHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCCh
Q 018274 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (358)
Q Consensus 145 l~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p 204 (358)
++.-++.- .|+.+++.|.|=|+|..=+-..+. +++=++|++|=|+++-
T Consensus 345 I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga-----------~l~P~AIiVgKPL~NL 392 (511)
T TIGR03712 345 IQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA-----------KLSPHAIIVGKPLVNL 392 (511)
T ss_pred HHHHHHHh-CCCHHHeeeccccccchhhhhhcc-----------cCCCceEEEcCcccch
Confidence 44444321 466789999999998643222222 4677899999998763
No 205
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=32.04 E-value=27 Score=22.81 Aligned_cols=12 Identities=42% Similarity=1.063 Sum_probs=6.5
Q ss_pred CEEEEEcCCCCh
Q 018274 68 PIILWLQGGPGA 79 (358)
Q Consensus 68 Plilwl~GGPG~ 79 (358)
--.||++|-||-
T Consensus 25 gRTiWFqGdPGp 36 (39)
T PF09292_consen 25 GRTIWFQGDPGP 36 (39)
T ss_dssp S-EEEESS---T
T ss_pred CCEEEeeCCCCC
Confidence 457999999973
No 206
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=31.49 E-value=87 Score=28.68 Aligned_cols=62 Identities=19% Similarity=0.255 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHHHHHhh--CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhh
Q 018274 134 DVEAANDLTTLLMELFNK--NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (358)
Q Consensus 134 ~~~~a~~~~~fl~~f~~~--~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~ 206 (358)
..++|++++..|+.|+.. -+.-...-=.|.|-|--| .-+..+.+ +-.+.|+.+|..-+-|+.
T Consensus 176 tp~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~g----~N~~el~~-------~~diDGFLVGGaSLKpeF 239 (247)
T KOG1643|consen 176 TPEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVNG----GNCKELAK-------KPDIDGFLVGGASLKPEF 239 (247)
T ss_pred CHHHHHHHHHHHHHHHhhcchhhhhhceEEEecccccc----ccHHHhcc-------cccccceEEcCcccChHH
Confidence 456889999999999986 222222223454444433 33444433 346899999999888864
No 207
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=31.15 E-value=78 Score=29.19 Aligned_cols=42 Identities=17% Similarity=0.260 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHH
Q 018274 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (358)
Q Consensus 135 ~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~ 177 (358)
.+...|+..++ .|+...|+-...++.++|-|+||+.+=..|.
T Consensus 90 ~~~~~d~~a~~-~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~ 131 (236)
T COG0412 90 AEVLADIDAAL-DYLARQPQVDPKRIGVVGFCMGGGLALLAAT 131 (236)
T ss_pred HHHHHHHHHHH-HHHHhCCCCCCceEEEEEEcccHHHHHHhhc
Confidence 56666776666 4777788766778999999999998665554
No 208
>PRK06762 hypothetical protein; Provisional
Probab=30.53 E-value=31 Score=29.42 Aligned_cols=13 Identities=15% Similarity=0.593 Sum_probs=11.5
Q ss_pred CEEEEEcCCCChh
Q 018274 68 PIILWLQGGPGAS 80 (358)
Q Consensus 68 Plilwl~GGPG~s 80 (358)
|.++|+.|.|||.
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999885
No 209
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=30.41 E-value=33 Score=30.42 Aligned_cols=26 Identities=31% Similarity=0.436 Sum_probs=21.1
Q ss_pred ccCCCCEEEEecccccchhhhhHHHH
Q 018274 154 ILQKSPLFIVAESYGGKFAATLGLAA 179 (358)
Q Consensus 154 ~~~~~~~~i~GeSYgG~yvp~~a~~i 179 (358)
....-|+.|-|.||||.....+|..+
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~ 110 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADEL 110 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhh
Confidence 34456899999999999988887765
No 210
>PF02402 Lysis_col: Lysis protein; InterPro: IPR003059 The DNA sequence of the entire colicin E2 operon has been determined []. The operon comprises the colicin activity gene (ceaB), the colicin immunity gene (ceiB) and the lysis gene (celB), which is essential for colicin release from producing cells []. A putative LexA binding site is located upstream from ceaB, and a rho-independent terminator structure is located downstream from celB []. Comparison of the amino acid sequences of colicin E2 and cloacin DF13 reveal extensive similarity. These colicins have different modes of action and recognise different cell surface receptors; the two major regions of heterology at the C terminus, and in the C-terminal end of the central region are thought to correspond to the catalytic and receptor-recognition domains, respectively []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. By contrast, the lysis proteins of the ColE2, ColE1 and CloDF13 plasmids are almost identical except in the N-terminal regions, which themselves are similar to lipoprotein signal peptides []. Processing of the ColE2 prolysis protein to the mature form is prevented by globomycin, a specific inhibitor of the lipoprotein signal peptidase []. The mature ColE2 lysis protein is located in the cell envelope [].; GO: 0009405 pathogenesis, 0019835 cytolysis, 0019867 outer membrane
Probab=30.18 E-value=30 Score=23.51 Aligned_cols=20 Identities=30% Similarity=0.150 Sum_probs=12.3
Q ss_pred CcchhhHHHHHHHHHHHHhhcc
Q 018274 1 MEKLCGFVATLLFLVSLLFNGG 22 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (358)
|||++..+.+++ +++|.||-
T Consensus 1 MkKi~~~~i~~~--~~~L~aCQ 20 (46)
T PF02402_consen 1 MKKIIFIGIFLL--TMLLAACQ 20 (46)
T ss_pred CcEEEEeHHHHH--HHHHHHhh
Confidence 888776554443 45666665
No 211
>COG3017 LolB Outer membrane lipoprotein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]
Probab=29.57 E-value=1.6e+02 Score=26.91 Aligned_cols=41 Identities=24% Similarity=0.559 Sum_probs=23.7
Q ss_pred eEEEecCC-ceEEEEEEEcCCC----CCCCCCCCCEEEEEcCCCChhhh
Q 018274 39 GYVEVRPK-AHMFWWLYKSPYR----IENPSKPWPIILWLQGGPGASGV 82 (358)
Q Consensus 39 Gy~~v~~~-~~~f~~~~~~~~~----~~~~~~~~Plilwl~GGPG~ss~ 82 (358)
||+.-+.. ..-|+|-+. +.+ -.+|-. +.+++|++-+|...+
T Consensus 59 ~yis~~q~~s~rF~Wqq~-p~~y~L~Ls~pLg--~t~l~L~~~~~ga~l 104 (206)
T COG3017 59 AYISDQQRGSARFFWQQQ-PDRYRLLLSNPLG--STLLELSQDRGGARL 104 (206)
T ss_pred EEEcCCCcceEEEEEEEc-CCcEEEEEeccCC--cceEEEEecCCceEE
Confidence 67765443 456788775 221 134433 477888887766443
No 212
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=29.28 E-value=93 Score=30.17 Aligned_cols=108 Identities=18% Similarity=0.145 Sum_probs=63.1
Q ss_pred CCCEEEEEcCCCChhhhh--hhhhcccCCCcccCccCccccccccccccccCCcccccccccCCCC-cccchHHHHHHHH
Q 018274 66 PWPIILWLQGGPGASGVG--IGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSS-FVKNDVEAANDLT 142 (358)
Q Consensus 66 ~~Plilwl~GGPG~ss~~--~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~~~~~-~~~~~~~~a~~~~ 142 (358)
.+|.||=.|. =|+-... -++|. .+--.+..+++-+.-||.| |--.--..=+.+ ...+.++.|+++.
T Consensus 45 ~kpaiiTyhD-lglN~~scFq~ff~---------~p~m~ei~~~fcv~HV~~P-Gqe~gAp~~p~~y~yPsmd~LAd~l~ 113 (326)
T KOG2931|consen 45 NKPAIITYHD-LGLNHKSCFQGFFN---------FPDMAEILEHFCVYHVDAP-GQEDGAPSFPEGYPYPSMDDLADMLP 113 (326)
T ss_pred CCceEEEecc-cccchHhHhHHhhc---------CHhHHHHHhheEEEecCCC-ccccCCccCCCCCCCCCHHHHHHHHH
Confidence 4577776663 4443331 23331 1223466677889999988 533221111111 2447889999998
Q ss_pred HHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCc
Q 018274 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (358)
Q Consensus 143 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng 200 (358)
..|+. |.-+-++=+|+--|.-....+|..- +-.+-|++|.|.
T Consensus 114 ~VL~~-------f~lk~vIg~GvGAGAyIL~rFAl~h---------p~rV~GLvLIn~ 155 (326)
T KOG2931|consen 114 EVLDH-------FGLKSVIGMGVGAGAYILARFALNH---------PERVLGLVLINC 155 (326)
T ss_pred HHHHh-------cCcceEEEecccccHHHHHHHHhcC---------hhheeEEEEEec
Confidence 88873 2234477778887766666666532 225789999663
No 213
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=27.54 E-value=2e+02 Score=28.38 Aligned_cols=66 Identities=21% Similarity=0.286 Sum_probs=40.1
Q ss_pred ccccccccCCcccc-ccccc----------CCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhh
Q 018274 107 KADLLFVDNPVGTG-YSYVE----------DNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (358)
Q Consensus 107 ~~~~l~iDqPvG~G-fS~~~----------~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~ 175 (358)
..-|+|-|+=|||| |--.. -..-+..+..+-.+..|.||-..|+ ....+|++|-|=|...+=.+
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~ye-----pGD~Iy~FGFSRGAf~aRVl 139 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYE-----PGDEIYAFGFSRGAFSARVL 139 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEEeeccchhHHHHHH
Confidence 34689999988887 21111 0112334455666667788876552 24579999999986544444
Q ss_pred HH
Q 018274 176 GL 177 (358)
Q Consensus 176 a~ 177 (358)
|-
T Consensus 140 ag 141 (423)
T COG3673 140 AG 141 (423)
T ss_pred HH
Confidence 43
No 214
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=26.23 E-value=1e+02 Score=32.88 Aligned_cols=21 Identities=14% Similarity=0.135 Sum_probs=17.3
Q ss_pred CCCEEEEecccccchhhhhHH
Q 018274 157 KSPLFIVAESYGGKFAATLGL 177 (358)
Q Consensus 157 ~~~~~i~GeSYgG~yvp~~a~ 177 (358)
++|+.|+|||+||.++=.|-.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHH
Confidence 579999999999988766544
No 215
>PRK14905 triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Probab=25.18 E-value=1.4e+02 Score=29.49 Aligned_cols=63 Identities=16% Similarity=0.236 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHHHHhh-CcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhh
Q 018274 134 DVEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (358)
Q Consensus 134 ~~~~a~~~~~fl~~f~~~-~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q 207 (358)
+.+.+++.+++++.++.. +.+- ...+-|. |||-.-|.-+..+.. .-++.|+.+|.+-++|..+
T Consensus 188 s~~~~~~~~~~Ir~~l~~~~~~~-~~~v~IL---YGGSV~~~N~~~l~~-------~~~iDG~LVG~asl~~~~f 251 (355)
T PRK14905 188 SAEYADEKHAIIKQCLFELFAEE-SKKIPVL---YGGSVNLENANELIM-------KPHIDGLFIGRSAWDAQCF 251 (355)
T ss_pred CHHHHHHHHHHHHHHHHHHhccc-cCceeEE---EeCcCCHHHHHHHhc-------CCCCCEEEechhhccHHHH
Confidence 345667788889988643 3222 2234444 999999988888764 2478999999999998765
No 216
>COG5567 Predicted small periplasmic lipoprotein [Cell motility and secretion]
Probab=25.16 E-value=69 Score=22.90 Aligned_cols=21 Identities=19% Similarity=0.156 Sum_probs=12.8
Q ss_pred CcchhhHHHHHHHHHHHHhhcc
Q 018274 1 MEKLCGFVATLLFLVSLLFNGG 22 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (358)
||+.+.-++.+. +++.+.+||
T Consensus 1 mk~~~~s~~ala-~l~sLA~CG 21 (58)
T COG5567 1 MKNVFKSLLALA-TLFSLAGCG 21 (58)
T ss_pred ChhHHHHHHHHH-HHHHHHhcc
Confidence 666665554444 334788888
No 217
>PF11777 DUF3316: Protein of unknown function (DUF3316); InterPro: IPR016879 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=25.05 E-value=73 Score=25.95 Aligned_cols=19 Identities=37% Similarity=0.431 Sum_probs=11.0
Q ss_pred CcchhhHHHHHHHHHHHHhh
Q 018274 1 MEKLCGFVATLLFLVSLLFN 20 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (358)
|||++...++|+ +.+..+|
T Consensus 1 MKk~~ll~~~ll-~s~~a~A 19 (114)
T PF11777_consen 1 MKKIILLASLLL-LSSSAFA 19 (114)
T ss_pred CchHHHHHHHHH-HHHHHhh
Confidence 888877764444 3334444
No 218
>COG4808 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.93 E-value=59 Score=27.70 Aligned_cols=23 Identities=30% Similarity=0.319 Sum_probs=15.0
Q ss_pred CcchhhH--HHHHHHHHHHHhhcch
Q 018274 1 MEKLCGF--VATLLFLVSLLFNGGA 23 (358)
Q Consensus 1 ~~~~~~~--~~~~~~~~~~~~~~~~ 23 (358)
||+++.. +++-+.|++.|.+||.
T Consensus 1 Mk~l~kl~~~~~alil~~sl~gCgd 25 (152)
T COG4808 1 MKALNKLFSLVVALVLVFSLAGCGD 25 (152)
T ss_pred ChhHHHHHHHHHHHHHHHHhhhcCc
Confidence 7877776 3444455666778874
No 219
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=23.72 E-value=1.3e+02 Score=26.32 Aligned_cols=39 Identities=23% Similarity=0.226 Sum_probs=26.0
Q ss_pred CCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCC
Q 018274 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (358)
Q Consensus 157 ~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~ 203 (358)
..+.+|+|||.|..-+-..+. + ....+++|+++-.|+-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~---~-----~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA---E-----QSQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH---H-----TCCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh---h-----cccccccEEEEEcCCCc
Confidence 567999999999865444332 1 22458999999888743
No 220
>PRK10781 rcsF outer membrane lipoprotein; Reviewed
Probab=23.66 E-value=65 Score=27.32 Aligned_cols=27 Identities=11% Similarity=0.060 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhhcchhhhhcCCCCC
Q 018274 7 FVATLLFLVSLLFNGGAAARALNKNQD 33 (358)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (358)
|+.+++||+++|..|++...-..+.+.
T Consensus 2 R~l~~~LL~L~LsGCS~l~~tp~ppp~ 28 (133)
T PRK10781 2 RALPICLLALMLTGCSMLSRSPVEPVQ 28 (133)
T ss_pred chHHHHHHHHHHhhccccCcCCCCCCC
Confidence 466778899999999966644444333
No 221
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=23.59 E-value=1.6e+02 Score=26.97 Aligned_cols=100 Identities=19% Similarity=0.294 Sum_probs=49.1
Q ss_pred CEEEEEcCCCChhhhhhhhhcccCCCccc--------------------CccCccccc-cccccccccCCcccccccccC
Q 018274 68 PIILWLQGGPGASGVGIGNFEEVGPFDTY--------------------LKPRNSTWL-KKADLLFVDNPVGTGYSYVED 126 (358)
Q Consensus 68 Plilwl~GGPG~ss~~~g~~~e~GP~~~~--------------------~~~n~~sw~-~~~~~l~iDqPvG~GfS~~~~ 126 (358)
-|.+=..|-||-..+| |.-.|++|..-. +..--+.-+ -..-.+||+ +|+.
T Consensus 30 ~LTvH~tGN~~~a~~G-G~p~~la~a~P~~~~~~l~~l~~~~~e~y~v~~EaTHHGPt~~~~Ps~FvE--IGSt------ 100 (213)
T PF04414_consen 30 SLTVHTTGNFGEAEYG-GKPGELAPANPRLMKALLRALKKHAPEGYEVSYEATHHGPTDLSVPSVFVE--IGST------ 100 (213)
T ss_dssp EEEEE--EESS--TTS-S-TTEE-BB-HHHHHHHHHHHHHHGGCT-EEEE--S-SS-----SBEEEEE--EEES------
T ss_pred eEEEeCCCCCCccccC-CCCCccccCCHHHHHHHHHHHHHhccCCCEEEEEeeccCCCCCCCCcEEEE--eCCC------
Confidence 3677788888886665 677777776311 000011111 223345555 2322
Q ss_pred CCCcccchHHHHHHHHHHHHHHHhhCcccC-CCCEEEEecccccchhhhhHHHHHH
Q 018274 127 NSSFVKNDVEAANDLTTLLMELFNKNEILQ-KSPLFIVAESYGGKFAATLGLAAVK 181 (358)
Q Consensus 127 ~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~-~~~~~i~GeSYgG~yvp~~a~~i~~ 181 (358)
.-..+++++++-+.+.+...+..-++-. ..++.-+| ||||.|.+...+++
T Consensus 101 --e~eW~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~ 151 (213)
T PF04414_consen 101 --EEEWNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALE 151 (213)
T ss_dssp --HHHHT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHH
T ss_pred --HHHhCChHHHHHHHHHHHHHhcccccccccceeEEec---Ccccchhhhhhhhc
Confidence 1234567777777777777776654321 14566667 89999999887765
No 222
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=23.00 E-value=2e+02 Score=27.52 Aligned_cols=85 Identities=24% Similarity=0.225 Sum_probs=49.3
Q ss_pred CCEEEEEcCCCChhhhhhhhhcccCCCcccCccCccccccccccccccCCccccccccc-C--CCCcccchHHHHHHHHH
Q 018274 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVE-D--NSSFVKNDVEAANDLTT 143 (358)
Q Consensus 67 ~Plilwl~GGPG~ss~~~g~~~e~GP~~~~~~~n~~sw~~~~~~l~iDqPvG~GfS~~~-~--~~~~~~~~~~~a~~~~~ 143 (358)
.|+|+|=.=|=.|||.+++.|.| +..+ -|-..|++-.. + .........++++...+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q-------~l~~--------------~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce 82 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQ-------LLEE--------------LPGSPVYCLEIGDGIKDSSLMPLWEQVDVACE 82 (296)
T ss_pred CCEEEEeccCcccccchHHHHHH-------HHHh--------------CCCCeeEEEEecCCcchhhhccHHHHHHHHHH
Confidence 59999866688999855666653 1101 13223333211 0 12334556667776667
Q ss_pred HHHHHHhhCcccCCCCEEEEecccccchhhhhHH
Q 018274 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (358)
Q Consensus 144 fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~ 177 (358)
.++ .-|+. .+-++|+|.|-||-.+=+++.
T Consensus 83 ~v~----~m~~l-sqGynivg~SQGglv~Raliq 111 (296)
T KOG2541|consen 83 KVK----QMPEL-SQGYNIVGYSQGGLVARALIQ 111 (296)
T ss_pred HHh----cchhc-cCceEEEEEccccHHHHHHHH
Confidence 776 23343 457999999999976444443
No 223
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=22.98 E-value=51 Score=28.68 Aligned_cols=14 Identities=29% Similarity=0.731 Sum_probs=10.4
Q ss_pred CCEEEEEcCCCChh
Q 018274 67 WPIILWLQGGPGAS 80 (358)
Q Consensus 67 ~Plilwl~GGPG~s 80 (358)
+|.+|||.|=||+-
T Consensus 1 ~g~vIwltGlsGsG 14 (156)
T PF01583_consen 1 KGFVIWLTGLSGSG 14 (156)
T ss_dssp S-EEEEEESSTTSS
T ss_pred CCEEEEEECCCCCC
Confidence 48999999977764
No 224
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=22.77 E-value=75 Score=30.73 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=22.5
Q ss_pred HHHHHHHhhCcccCCCCEEEEecccccchhhhh
Q 018274 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (358)
Q Consensus 143 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~ 175 (358)
+.|.-|......|....++++|||-||..+..+
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLl 293 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLL 293 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHh
Confidence 344444444456667799999999999655443
No 225
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=22.77 E-value=75 Score=30.73 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=22.5
Q ss_pred HHHHHHHhhCcccCCCCEEEEecccccchhhhh
Q 018274 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (358)
Q Consensus 143 ~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~ 175 (358)
+.|.-|......|....++++|||-||..+..+
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLl 293 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLL 293 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHh
Confidence 344444444456667799999999999655443
No 226
>PF13627 LPAM_2: Prokaryotic lipoprotein-attachment site
Probab=22.65 E-value=69 Score=18.88 Aligned_cols=14 Identities=36% Similarity=0.268 Sum_probs=9.2
Q ss_pred HHHHHHHHHhhcch
Q 018274 10 TLLFLVSLLFNGGA 23 (358)
Q Consensus 10 ~~~~~~~~~~~~~~ 23 (358)
++++.+++|.+||+
T Consensus 4 ~~~~~~~~LsgCG~ 17 (24)
T PF13627_consen 4 LLLALALALSGCGQ 17 (24)
T ss_pred HHHHHHHHHHhccc
Confidence 44446667888884
No 227
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A.
Probab=22.32 E-value=1.4e+02 Score=28.94 Aligned_cols=48 Identities=13% Similarity=0.039 Sum_probs=33.1
Q ss_pred chHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHH
Q 018274 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAI 183 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~ 183 (358)
..++.++++.+.++.|...++.-.=..+||+| ||-.+|.|+..+.+..
T Consensus 251 ~~~~l~~EI~rsl~~y~~~~~~~~i~~I~L~G---gga~l~gL~~~l~~~l 298 (340)
T PF11104_consen 251 FLEELAREIRRSLDFYQSQSGGESIERIYLSG---GGARLPGLAEYLSEEL 298 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHH------SEEEEES---GGGGSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEC---CccchhhHHHHHHHHH
Confidence 34567777888888777766655556799999 8888999999987654
No 228
>PF09680 Tiny_TM_bacill: Protein of unknown function (Tiny_TM_bacill); InterPro: IPR010070 This entry represents a family of hypothetical proteins, half of which are 40 residues or less in length. Members are found only in spore-forming species. A Gly-rich variable region is followed by a strongly conserved, highly hydrophobic region, predicted to form a transmembrane helix, ending with an invariant Gly. The consensus for this stretch is FALLVVFILLIIV.
Probab=21.92 E-value=80 Score=18.59 Aligned_cols=18 Identities=11% Similarity=0.139 Sum_probs=9.6
Q ss_pred hhhHHHHHHHHHHHHhhc
Q 018274 4 LCGFVATLLFLVSLLFNG 21 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~ 21 (358)
|.+.|-|+.||++.-++|
T Consensus 6 FalivVLFILLiIvG~s~ 23 (24)
T PF09680_consen 6 FALIVVLFILLIIVGASC 23 (24)
T ss_pred chhHHHHHHHHHHhccee
Confidence 445555555566554443
No 229
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=21.90 E-value=1.1e+02 Score=29.05 Aligned_cols=16 Identities=31% Similarity=0.505 Sum_probs=13.2
Q ss_pred CCCEEEEecccccchh
Q 018274 157 KSPLFIVAESYGGKFA 172 (358)
Q Consensus 157 ~~~~~i~GeSYgG~yv 172 (358)
..+-.|+|||+||-++
T Consensus 136 ~~~~~i~GhSlGGLfv 151 (264)
T COG2819 136 SERTAIIGHSLGGLFV 151 (264)
T ss_pred cccceeeeecchhHHH
Confidence 4459999999999765
No 230
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=21.64 E-value=53 Score=22.04 Aligned_cols=31 Identities=16% Similarity=-0.085 Sum_probs=21.4
Q ss_pred ccCChhhhhhhhhhhhhhcCCCChhhHHHHH
Q 018274 200 SWISPEDFVFSWGPLLKDMSRLDTNGFAKSN 230 (358)
Q Consensus 200 g~i~p~~q~~~~~~~~~~~gli~~~~~~~~~ 230 (358)
|.+||..-..--.+-|...|+||.+....+.
T Consensus 12 Giidp~tg~~lsv~~A~~~glId~~~~~~L~ 42 (45)
T PF00681_consen 12 GIIDPETGERLSVEEAIQRGLIDSDTAQKLL 42 (45)
T ss_dssp SEEETTTTEEEEHHHHHHTTSS-HHHHHHHH
T ss_pred eEEeCCCCeEEcHHHHHHCCCcCHHHHHHHH
Confidence 6788877554455667789999998776654
No 231
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=21.64 E-value=1.1e+02 Score=32.75 Aligned_cols=61 Identities=13% Similarity=0.171 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHhhCcccCC-CCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccCChhhhh
Q 018274 137 AANDLTTLLMELFNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFV 208 (358)
Q Consensus 137 ~a~~~~~fl~~f~~~~p~~~~-~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i~p~~q~ 208 (358)
.-.||.+.-+...+ ..|.. ..+++.|-|-||..+-++++.-.+ -++||+.--|++|+.+.+
T Consensus 507 Tf~DFIa~a~~Lv~--~g~~~~~~i~a~GGSAGGmLmGav~N~~P~---------lf~~iiA~VPFVDvltTM 568 (682)
T COG1770 507 TFTDFIAAARHLVK--EGYTSPDRIVAIGGSAGGMLMGAVANMAPD---------LFAGIIAQVPFVDVLTTM 568 (682)
T ss_pred cHHHHHHHHHHHHH--cCcCCccceEEeccCchhHHHHHHHhhChh---------hhhheeecCCccchhhhh
Confidence 34455554444332 23433 479999999999988777764322 489999999999997654
No 232
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=21.62 E-value=1.7e+02 Score=27.30 Aligned_cols=102 Identities=18% Similarity=0.086 Sum_probs=62.8
Q ss_pred cccccCCcccccccccCCCCcccchHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcce
Q 018274 110 LLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLK 189 (358)
Q Consensus 110 ~l~iDqPvG~GfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~ 189 (358)
.+-+|=. |-|-|... -++.+-...|+|+...+|.|-..+- .==.|.|||=||--+-..|.++.. .+.-
T Consensus 65 ~fRfDF~-GnGeS~gs---f~~Gn~~~eadDL~sV~q~~s~~nr----~v~vi~gHSkGg~Vvl~ya~K~~d----~~~v 132 (269)
T KOG4667|consen 65 AFRFDFS-GNGESEGS---FYYGNYNTEADDLHSVIQYFSNSNR----VVPVILGHSKGGDVVLLYASKYHD----IRNV 132 (269)
T ss_pred EEEEEec-CCCCcCCc---cccCcccchHHHHHHHHHHhccCce----EEEEEEeecCccHHHHHHHHhhcC----chhe
Confidence 3456744 88877643 2334444556999999986654211 123578999999888777776643 1235
Q ss_pred eeeeeeeccCccCChhhhhhhhhhhhhhcCCCChh
Q 018274 190 LKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTN 224 (358)
Q Consensus 190 inlkGi~iGng~i~p~~q~~~~~~~~~~~gli~~~ 224 (358)
||+.|=..+-+.|.-..+ ..|.++..+.|.||-.
T Consensus 133 iNcsGRydl~~~I~eRlg-~~~l~~ike~Gfid~~ 166 (269)
T KOG4667|consen 133 INCSGRYDLKNGINERLG-EDYLERIKEQGFIDVG 166 (269)
T ss_pred EEcccccchhcchhhhhc-ccHHHHHHhCCceecC
Confidence 777777776666642222 3455555666777654
No 233
>PF05436 MF_alpha_N: Mating factor alpha precursor N-terminus; InterPro: IPR008675 This entry contains the N-terminal regions of the Saccharomyces mating factor alpha precursor protein. All proteins in this family contain one or more copies of IPR006742 from INTERPRO further toward their C terminus.; GO: 0007618 mating, 0005576 extracellular region
Probab=21.54 E-value=1.1e+02 Score=23.90 Aligned_cols=12 Identities=17% Similarity=0.515 Sum_probs=8.8
Q ss_pred eeEEEecCCceE
Q 018274 38 WGYVEVRPKAHM 49 (358)
Q Consensus 38 ~Gy~~v~~~~~~ 49 (358)
=||++..+....
T Consensus 39 iGyLDl~~d~Dv 50 (86)
T PF05436_consen 39 IGYLDLGGDNDV 50 (86)
T ss_pred hceeccCCCCce
Confidence 399999876544
No 234
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=21.51 E-value=1.1e+02 Score=29.73 Aligned_cols=44 Identities=14% Similarity=0.077 Sum_probs=32.7
Q ss_pred chHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHH
Q 018274 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i 179 (358)
+....++++...+.+.+.... .+++.|.|||.||.-+..++..+
T Consensus 105 ~~~~~~~ql~~~V~~~l~~~g---a~~v~LigHS~GG~~~ry~~~~~ 148 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLAKTG---AKKVNLIGHSMGGLDSRYYLGVL 148 (336)
T ss_pred cccccHHHHHHHHHHHHhhcC---CCceEEEeecccchhhHHHHhhc
Confidence 445566677788887776554 47999999999999888665544
No 235
>PRK03995 hypothetical protein; Provisional
Probab=21.24 E-value=1.5e+02 Score=28.13 Aligned_cols=46 Identities=20% Similarity=0.332 Sum_probs=27.9
Q ss_pred chHHHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHH
Q 018274 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (358)
Q Consensus 133 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 181 (358)
.++++++-+.+.+...+..-+.-...++.-+| ||||.|.+...+++
T Consensus 157 ~d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~ 202 (267)
T PRK03995 157 KNERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALE 202 (267)
T ss_pred CCcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhh
Confidence 44455555666666655422222234566666 89999999887765
No 236
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=21.15 E-value=3.4e+02 Score=26.77 Aligned_cols=59 Identities=19% Similarity=0.190 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEecccccchhhhhHHHHHHHHHhCcceeeeeeeeccCccC
Q 018274 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (358)
Q Consensus 136 ~~a~~~~~fl~~f~~~~p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~~~~~~~~inlkGi~iGng~i 202 (358)
++.+.+.+.|.+ ..+ .+||+.|+|+|-|+.-+=.--..+.++ ....+-=.-+.||.|..
T Consensus 203 ~aG~~LA~~L~~----~~~-G~RpVtLvG~SLGarvI~~cL~~L~~~---~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 203 KAGKVLADALLS----RNQ-GERPVTLVGHSLGARVIYYCLLELAER---KAFGLVENVVLMGAPVP 261 (345)
T ss_pred HHHHHHHHHHHH----hcC-CCCceEEEeecccHHHHHHHHHHHHhc---cccCeEeeEEEecCCCC
Confidence 344545555543 333 688999999999998776555555443 22223223445666554
No 237
>TIGR03044 PS_II_psb27 photosystem II protein Psb27. Members of this family are the Psb27 protein of the cyanobacterial photosynthetic supracomplex, photosystem II. Although most protein components of both cyanobacterial and chloroplast versions of photosystem II are closely related and described together by single model families, this family is strictly bacterial. Some uncharacterized proteins with highly divergent sequences, from Arabidopsis, score between trusted and noise cutoffs for this model but are not at this time assigned as functionally equivalent photosystem II proteins.
Probab=21.11 E-value=83 Score=26.73 Aligned_cols=17 Identities=35% Similarity=0.241 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHhhcchh
Q 018274 8 VATLLFLVSLLFNGGAA 24 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~~ 24 (358)
++++|-++++|++|+.+
T Consensus 12 lal~L~~~l~l~~c~~~ 28 (135)
T TIGR03044 12 LALVLGLCLLLTACSGA 28 (135)
T ss_pred HHHHHHHHHHHhcccCC
Confidence 36666677778888743
No 238
>TIGR01653 lactococcin_972 bacteriocin, lactococcin 972 family. This model represents bacteriocins related to lactococcin 972. Members tend to be found in association with a seven transmembrane putative immunity protein.
Probab=21.02 E-value=70 Score=25.37 Aligned_cols=24 Identities=42% Similarity=0.414 Sum_probs=15.2
Q ss_pred CcchhhHHHHHHHHHHHHhhcchhhh
Q 018274 1 MEKLCGFVATLLFLVSLLFNGGAAAR 26 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (358)
|||.+ |++++.++++....++|++
T Consensus 1 mkkk~--~~~~~~~~il~~~~g~a~~ 24 (92)
T TIGR01653 1 MKKKV--VASLVSTTILATLGGLAAQ 24 (92)
T ss_pred Cchhh--HHHHHHHHHHhhhhhhhee
Confidence 78776 6666666666655555444
No 239
>COG5633 Predicted periplasmic lipoprotein [General function prediction only]
Probab=20.57 E-value=69 Score=26.56 Aligned_cols=27 Identities=33% Similarity=0.480 Sum_probs=16.0
Q ss_pred CcchhhHHHHHHHHHHHHhhcchhhhhcCCC
Q 018274 1 MEKLCGFVATLLFLVSLLFNGGAAARALNKN 31 (358)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (358)
|+|.|..+..++ +|+.|+....+....
T Consensus 1 Mrk~~~~~l~~~----lLvGCsS~~~i~~~~ 27 (123)
T COG5633 1 MRKLCLLSLALL----LLVGCSSHQEILVND 27 (123)
T ss_pred CceehHHHHHHH----HhhccCCCCCccccc
Confidence 899998333333 344888666554443
Done!