BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018276
(358 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54P70|Y4757_DICDI OTU domain-containing protein DDB_G0284757 OS=Dictyostelium
discoideum GN=DDB_G0284757 PE=4 SV=2
Length = 766
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 11/157 (7%)
Query: 195 IPSPDEEISDHQRMLDRLQLYDLVENK-VQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVN 253
+P E QR+ +RL+LY L +K + GDGNCQ +LSDQLY H VR+ +V+
Sbjct: 608 LPQSKEVQIAQQRLNERLELYMLKNSKEIPGDGNCQMHALSDQLYGDLSHSQEVRKTIVD 667
Query: 254 QLKAHPE--------IYEGYVPMAYSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTS 305
L+ + + I + + DY M+K+G WGDH+TL AAA+ +G K+ +++S
Sbjct: 668 WLRKNKDFQLPNGATICQFVNTNNWDDYCNDMSKNGNWGDHLTLLAAAEHFGSKISIISS 727
Query: 306 F--KDTCYIEILPHVPKSKRVIFLSFWAEVHYNSIYP 340
+ +IEI+P + +V+ LS +AE HY S+ P
Sbjct: 728 VESQSNFFIEIIPSKILNDKVLLLSHYAEFHYGSLCP 764
>sp|Q196X6|VF232_IIV3 Putative ubiquitin thioesterase 232R OS=Invertebrate iridescent
virus 3 GN=IIV3-084L PE=3 SV=1
Length = 844
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 25/193 (12%)
Query: 169 SVIDGELGKRLNQMVPVPHIPKINGDIPSPDEEISDHQRMLDRLQLYDLVENK------V 222
SV+D +L ++ + P+P + + D PS E+ ++ L L ++K V
Sbjct: 540 SVVDPQLSRKT--LKPLPSL--VVTDQPSKQPELPKYKGRTPYTDLEQLAQSKGYTVKQV 595
Query: 223 QGDGNCQFRSL--SDQLYRSPEH-HMFVRQQVVNQLKAHPE---IYEGYVPM-------A 269
GDGNC FRS+ S + R + H +RQ VV+ L+ +PE +Y YV +
Sbjct: 596 SGDGNCLFRSVCKSIRALRGEKFTHRQLRQMVVDYLRENPEFLQVYLEYVARQRDNSLPS 655
Query: 270 YSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPHVPKSKRVIFLSF 329
YL +M+K G WGD + L+ ++ V+ +L +T +++ VI L +
Sbjct: 656 TEQYLSEMSKCGTWGDLICLKTLSEILKVQFNLL--ILNTKQFQMVSSQDDYPDVIPLGY 713
Query: 330 WAEVHYNSIYPEG 342
HY S+ P G
Sbjct: 714 IDNYHYTSLVPIG 726
>sp|P22856|VL96_IRV1 Putative ubiquitin thioesterase L96 OS=Tipula iridescent virus
GN=L96 PE=3 SV=1
Length = 867
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 208 MLDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPE---HHMFVRQQVVNQLKAHPEIYEG 264
+L R + Y ++ V+GDGNC FR++ L + H +R QVV L +H E E
Sbjct: 599 ILARRRGYKVIP--VKGDGNCLFRAVGKSLRLNQNIKYSHEDLRAQVVTYLTSHKEFLEP 656
Query: 265 YV----------PMAYSD----YLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTC 310
Y+ P Y+ Y+K ++K G WGD + L+ ++ VK +L +T
Sbjct: 657 YLEYVTESGDTTPQEYAKNVERYIKNISKPGTWGDFICLRVLSEILKVKFNLL--ILNTR 714
Query: 311 YIEILPHVPKSKRVIFLSFWAEVHYNSIYP 340
+++ + K +I L F + HY ++ P
Sbjct: 715 NFQVISNNDTFKPLIPLGFIDDYHYTALTP 744
>sp|Q08BW0|OTU5A_DANRE OTU domain-containing protein 5-A OS=Danio rerio GN=otud5a PE=2
SV=1
Length = 560
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
V K++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 211 FVIKKMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 270
Query: 277 MNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPHVPKSKRVIFLSFWAEVHYN 336
K+ G+H+ +QA A+ Y V V S + H + I +S+ +HYN
Sbjct: 271 KRKNNCHGNHIEMQAMAEMYNRPVEVYQSGTEPINTFHGIHQ-NNDEPIRVSYHRNIHYN 329
Query: 337 SI 338
S+
Sbjct: 330 SV 331
>sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1
Length = 571
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
+ +++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 213 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 272
Query: 277 MNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPHV----PKSKRVIFLSFWAE 332
K+ G+H+ +QA A+ Y V V T +E + I +S+
Sbjct: 273 KRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTGTSAVEPINTFHGIHQNEDEPIRVSYHRN 332
Query: 333 VHYNSI 338
+HYNS+
Sbjct: 333 IHYNSV 338
>sp|Q7ZX21|OTU5A_XENLA OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-a PE=2
SV=1
Length = 513
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 199 DEEISDHQRMLDRLQLYD---LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQL 255
D + ++ Q + L D + +++ DG C FR+++DQ+Y + H VR+ ++ L
Sbjct: 145 DPDTAEQQELCFEKTLSDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYL 204
Query: 256 KAHPEIYEGYVPMAYSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEIL 315
+ + + YV ++ Y+ + K+ G+H+ +QA A+ Y V V + I
Sbjct: 205 MKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEP--INTF 262
Query: 316 PHVPKSK-RVIFLSFWAEVHYNSI 338
+ K++ I +S+ +HYNS+
Sbjct: 263 HGIQKNEDEPIRVSYHRNIHYNSV 286
>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=3
Length = 1113
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 198 PDEEISDHQRMLDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKA 257
P E+ + L +L LY + V DG+C FR++++Q+ S H+ VR ++ L+
Sbjct: 18 PREDATPMDAYLRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHYLRE 74
Query: 258 HPEIYEGYVPMAYSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPH 317
+ E +E ++ ++ +YLK++ EW V + A + Y K F++ + ++ +
Sbjct: 75 NREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMY-RKDFIIYREPNVSPSQVTEN 133
Query: 318 VPKSKRVIFLSFWAEVHYNSIYP 340
K + L F HY+ +YP
Sbjct: 134 NFPEK--VLLCFSNGNHYDIVYP 154
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
+ +++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 213 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 272
Query: 277 MNKSGEWGDHVTLQAAADSYGVKVFV-------LTSFKDTCYIEILPHVPKSKRVIFLSF 329
K+ G+H+ +QA A+ Y V V + +F E P I +S+
Sbjct: 273 KRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEP--------IRVSY 324
Query: 330 WAEVHYNSI 338
+HYNS+
Sbjct: 325 HRNIHYNSV 333
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
+ +++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 213 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 272
Query: 277 MNKSGEWGDHVTLQAAADSYGVKVFV-------LTSFKDTCYIEILPHVPKSKRVIFLSF 329
K+ G+H+ +QA A+ Y V V + +F E P I +S+
Sbjct: 273 KRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQNEDEP--------IRVSY 324
Query: 330 WAEVHYNSI 338
+HYNS+
Sbjct: 325 HRNIHYNSV 333
>sp|Q6GL44|OTUD5_XENTR OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2
SV=1
Length = 518
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
+ +++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 171 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 230
Query: 277 MNKSGEWGDHVTLQAAADSYGVKVFV-------LTSFKDTCYIEILPHVPKSKRVIFLSF 329
K+ G+H+ +QA A+ Y V V + +F E P I +S+
Sbjct: 231 KRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQQNEDEP--------IRVSY 282
Query: 330 WAEVHYNSI 338
+HYNS+
Sbjct: 283 HRNIHYNSV 291
>sp|Q640H3|OTU5B_XENLA OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-b PE=2
SV=1
Length = 518
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
+ +++ DG C FR+++DQ+Y + H VR+ ++ L + + + YV ++ Y+ +
Sbjct: 171 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 230
Query: 277 MNKSGEWGDHVTLQAAADSYGVKVFV-------LTSFKDTCYIEILPHVPKSKRVIFLSF 329
K+ G+H+ +QA A+ Y V V + +F E P I +S+
Sbjct: 231 KRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQQNEDEP--------IRVSY 282
Query: 330 WAEVHYNSI 338
+HYNS+
Sbjct: 283 HRNIHYNSV 291
>sp|B2RRE7|OTUD4_MOUSE OTU domain-containing protein 4 OS=Mus musculus GN=Otud4 PE=1 SV=1
Length = 1107
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 209 LDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPM 268
L +L LY + V DG+C FR++++Q+ S H+ VR + L+ + E +E ++
Sbjct: 29 LRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQSRHVEVRMACIRYLRENREKFEAFIEG 85
Query: 269 AYSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPHVPKSKRVIFLS 328
++ +YLK++ EW V + A + Y K FV+ + + + K + L
Sbjct: 86 SFEEYLKRLENPQEWVGQVEISALSLMY-RKDFVIYQEPNVSPSHVTENNFPEK--VLLC 142
Query: 329 FWAEVHYNSIYP 340
F HY+ +YP
Sbjct: 143 FSNGNHYDIVYP 154
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKK 276
L V D +C FR++S+QL+ S HH+ +R+ V+ +K + + +E YV ++ YL++
Sbjct: 225 LFRKVVAKDASCLFRAISEQLFHSQIHHLQIRRACVSYMKENQQAFESYVEGSFEKYLER 284
Query: 277 MNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPHVPKSKRVIFLSFWAEVHYN 336
+ E + L+A + Y + F++ + ++ + + K I L + HY+
Sbjct: 285 LGDPKESAGQLELKALSLIYN-RDFIIYRYPGKPPTQVTDNGFEDK--IILCYSNNGHYD 341
Query: 337 SIY 339
S+Y
Sbjct: 342 SVY 344
>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
Length = 443
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 20/150 (13%)
Query: 198 PDEEISDHQRMLDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKA 257
P E+ + L +L LY + V DG+C FR++++Q+ S H+ VR ++ L+
Sbjct: 18 PREDATPMDAYLRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHCLRE 74
Query: 258 HPEIYEGYVPMAYSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPH 317
+ E +E + ++ YLK++ EW + + A + Y K F+ + P+
Sbjct: 75 NREKFEAIIGGSFEGYLKRLENPQEWVGQMEISALSLMY-RKDFITN---------LEPN 124
Query: 318 VPKSKRV-------IFLSFWAEVHYNSIYP 340
V S+ + L F HY+ +YP
Sbjct: 125 VSPSQVTENNFPEKVLLCFSNGNHYDIVYP 154
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 10/133 (7%)
Query: 209 LDRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPM 268
L L L+ + K D +C FR++S+QL+ S HH+ +R+ V+ ++ + + +E YV
Sbjct: 226 LGSLGLFRKLTAK---DASCLFRAISEQLFCSQVHHLEIRKACVSYMRENQQTFESYVEG 282
Query: 269 AYSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSF--KDTCYIEILPHVPKSKRVIF 326
++ YL+++ E + ++A + Y + F+L F K Y+ + K I
Sbjct: 283 SFEKYLERLGDPKESAGQLEIRALSLIYN-RDFILYRFPGKPPTYVTDNGYEDK----IL 337
Query: 327 LSFWAEVHYNSIY 339
L + + HY+S+Y
Sbjct: 338 LCYSSSGHYDSVY 350
>sp|Q9UUK3|OTU2_SCHPO Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=otu2 PE=4 SV=1
Length = 324
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 21/139 (15%)
Query: 217 LVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKA-----HPEIYEGYV----- 266
LV + DGNC F S+S QL + H++ + Q + A H E +EG++
Sbjct: 185 LVAVDIPADGNCLFASISHQL--NYHHNVKLNSQALRNKSADYVLKHCEQFEGFLLDEES 242
Query: 267 --PMAYSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPHVPKSKRV 324
+ SDY ++ + +WG + +QA A+S V V V + + ++ P K ++
Sbjct: 243 GEVLPVSDYCNEIRNNSKWGSDIEIQALANSLEVPVHVYNT--EGPVLKFNPSTVKFEKP 300
Query: 325 IFLSFWAEV-----HYNSI 338
+ ++++ + HYNS+
Sbjct: 301 LCIAYYQHLFGLGAHYNSL 319
>sp|Q5T2D3|OTUD3_HUMAN OTU domain-containing protein 3 OS=Homo sapiens GN=OTUD3 PE=1 SV=1
Length = 398
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 210 DRLQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVP-- 267
++LQ L +V GDGNC FR+L DQL +H+ RQ+ V+ + E +E +V
Sbjct: 58 NQLQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDD 117
Query: 268 MAYSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFV 302
+ + ++ + K G + + + A A ++ + V +
Sbjct: 118 IPFEKHVASLAKPGTFAGNDAIVAFARNHQLNVVI 152
>sp|O13974|OTU1_SCHPO Putative ubiquitin thioesterase otu1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=otu1 PE=1 SV=1
Length = 329
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 216 DLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYS-DYL 274
D+ + D +C FR+LS L SP +R+ V NQ+ ++P+IY + S +Y
Sbjct: 134 DIALRVMPDDNSCLFRALSKPLGFSPYE---LREIVANQVLSNPDIYSTAILGKPSIEYA 190
Query: 275 KKMNKSGEWGDHVTLQAAADSYGVKV 300
+ K WG ++ L + +GV++
Sbjct: 191 SWIRKETSWGGYIELSILSSHFGVEI 216
>sp|Q9CUB6|OTUD1_MOUSE OTU domain-containing protein 1 OS=Mus musculus GN=Otud1 PE=2 SV=2
Length = 454
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 199 DEEISDHQRMLDRLQLYDLVENK----VQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQ 254
DE+++ + ++R Y NK + DGNC +R++S +Y H +R+Q V+
Sbjct: 260 DEKLALYLAEVERQDKYLRQRNKYRFHIIPDGNCLYRAVSKTVYGDQSLHRELREQTVHY 319
Query: 255 LKAHPEIYEGYVPMAYSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFK-DTCYIE 313
+ H + + + +++ + G W + L A V + + T + ++ +
Sbjct: 320 IADHLDHFSPLIEGDVGEFIIAAAQDGAWAGYPELLAMGQMLNVNIHLTTGGRLESPTVS 379
Query: 314 ILPHV--PKS--KRVIFLSFWAEVHYNSIY 339
+ H P+ + I+LS+ + HY++++
Sbjct: 380 TMIHYLGPEDSLRPSIWLSWLSNGHYDAVF 409
>sp|Q5VV17|OTUD1_HUMAN OTU domain-containing protein 1 OS=Homo sapiens GN=OTUD1 PE=2 SV=1
Length = 481
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 225 DGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYSDYLKKMNKSGEWG 284
DGNC +R++S +Y H +R+Q V+ + H + + + +++ + G W
Sbjct: 317 DGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWA 376
Query: 285 DHVTLQAAADSYGVKVFVLTSFK-DTCYIEILPHV--PKS--KRVIFLSFWAEVHYNSIY 339
+ L A V + + T + ++ + + H P+ + I+LS+ + HY++++
Sbjct: 377 GYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAVF 436
>sp|P10383|OTU_DROME Protein ovarian tumor locus OS=Drosophila melanogaster GN=otu PE=2
SV=2
Length = 853
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 212 LQLYDLVENKVQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVPMAYS 271
L+ L D + FR +++Q+Y + H +R + V + I+E +P +
Sbjct: 24 LESRGLYRKHTARDASSLFRVIAEQMYDTQMLHYEIRLECVRFMTLKRRIFEKEIPGDFD 83
Query: 272 DYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPHVPKSKRVIFLSFWA 331
Y++ M+K +G L+A + Y V + + + ++ RV F +
Sbjct: 84 SYMQDMSKPKTYGTMTELRAMSCLYRRNVILYEPYNMGTSVVFNRRYAENFRVFFNN--- 140
Query: 332 EVHYNSIY 339
E H++S+Y
Sbjct: 141 ENHFDSVY 148
>sp|Q9LK39|AAE16_ARATH Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis
thaliana GN=AAE16 PE=2 SV=1
Length = 722
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 10/163 (6%)
Query: 30 SGSQNVITRYDRDSSQVGYVRECYSETELAYVENDEVIAHVLQEEFSQVAAAEASGSINP 89
+G+ NV+ R R S + C+SE+ V+N E + E FS AA + +
Sbjct: 158 TGAVNVV-RGSRSSVEELLQIYCHSESVALVVDNPEFFNRI-AESFSYKAAPKFVILLWG 215
Query: 90 EKSSILEQDRVSPLGIYNN-SVCENDRSA----ADGSGKNEEEMDDSGRMVEADYQSKGE 144
EKSS++ R +P+ YN +R A ++ SGK E E D + Y S G
Sbjct: 216 EKSSLVTAGRHTPVYSYNEIKKFGQERRAKFARSNDSGKYEYEYIDPDDIATIMYTS-GT 274
Query: 145 KVELEYDEDNMEDLLHQLDTTDESSVIDGELGKRLNQMVPVPH 187
+ ++LLHQ+ + S + E G+R M+P H
Sbjct: 275 TGNPKGVMLTHQNLLHQIR--NLSDFVPAEAGERFLSMLPSWH 315
>sp|Q7L8S5|OTU6A_HUMAN OTU domain-containing protein 6A OS=Homo sapiens GN=OTUD6A PE=2
SV=1
Length = 288
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 222 VQGDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAH----------PEIYEGYVPMAYS 271
+ DG+C +R++ DQL S M +R + + +K H PE + + +
Sbjct: 146 IPADGHCMYRAIQDQLVFSVSVEM-LRCRTASYMKKHVDEFLPFFSNPETSDSFGYDDFM 204
Query: 272 DYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPHVPKSKRVIFLSFWA 331
Y + ++ WG + L+A + + V+ + T I +V K +++L +
Sbjct: 205 IYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADSPTLIIG-EEYVKKPIILVYLRYAY 263
Query: 332 EV--HYNSIYP 340
+ HYNS+ P
Sbjct: 264 SLGEHYNSVTP 274
>sp|Q6TQR6|L_CCHFI RNA-directed RNA polymerase L OS=Crimean-Congo hemorrhagic fever
virus (strain Nigeria/IbAr10200/1970) GN=L PE=1 SV=2
Length = 3945
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 224 GDGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYE----GYVPMAYSDYLKKMNK 279
GDGNC + S+++ + H + + + + A E V ++ DYLK+M
Sbjct: 36 GDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEARLVGLSLEDYLKRMLS 95
Query: 280 SGEWGDHVTLQAAADSYGVKVFVLT 304
EWG + A G+ + + T
Sbjct: 96 DNEWGSTLEASMLAKEMGITIIIWT 120
>sp|P38747|OTU2_YEAST OTU domain-containing protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU2 PE=1 SV=1
Length = 307
Score = 35.4 bits (80), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 194 DIPSPDEEISDHQRMLDRLQLYDLVENKVQGDGNCQFRSLSDQ--LYRSPEHH------M 245
D+ ++E D L +L+ +D +Q DG+C F S+ DQ L P+ M
Sbjct: 149 DLKKMEQESIDQLCELKKLKQFD-----IQPDGHCLFASILDQLKLRHDPKKLDQDMDVM 203
Query: 246 FVRQQVVNQLKAHPEIYEGYV----PMAYSD---YLKKMNKSGEWGDHVTLQAAADSYGV 298
+R N ++ H + + Y+ M D Y K+M + +WG + + A + +
Sbjct: 204 KLRWLSCNYVQEHRDDFIPYLFDEETMKMKDIDEYTKEMEHTAQWGGEIEILALSHVFDC 263
Query: 299 KVFVLTSFKDTCYIEILPHVPKSKRVIFL-SFWAEVHYNSIY 339
+ +L S + P+ K V + S+ HYNS++
Sbjct: 264 PISILMSGRPIQVYNECGKNPELKLVYYKHSYALGEHYNSLH 305
>sp|Q91FU0|VF232_IIV6 Putative ubiquitin thioesterase 232R OS=Invertebrate iridescent
virus 6 GN=IIV6-232R PE=3 SV=1
Length = 671
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 225 DGNCQFRSLSDQLYRSPEHHMFVRQQVVNQLKAHPEIYEGYVP-------MAYSDYLKKM 277
DGNC F + S +RQ V+ L+ ++ ++P + ++DY+ ++
Sbjct: 400 DGNCMFSVIGRAFNTS---SSVIRQHTVDYLRRCKGSFD-HIPANIDDPTINWNDYIDRL 455
Query: 278 NKSGEWGDHVTLQAAADSYGVKVFVL--TSFKDTCYIEILPHVPKSKRVIFLSFWAEVHY 335
+ WGD+ L AA+ + + +L + +I + R++ + + HY
Sbjct: 456 EEDACWGDNTALFAASLALNFQAHILQVAGGDEGSWIRFGVNETNMGRIVNMGYLDNFHY 515
Query: 336 NSIYP-EGELPLL 347
++ P G L +L
Sbjct: 516 IALEPFSGRLDIL 528
>sp|Q8K2H2|OTU6B_MOUSE OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2
SV=1
Length = 294
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 19/134 (14%)
Query: 221 KVQGDGNCQFRSLSDQLYRSPEHHMFV---RQQVVNQLKAH----------PEIYEGYVP 267
++ DG+C + +L DQL R + + V R+Q ++ H P + Y P
Sbjct: 152 QIPSDGHCMYGALEDQL-REQDCALTVASLRRQTAEYMQTHSDDFLPFLTNPSTGDMYTP 210
Query: 268 MAYSDYLKKMNKSGEWGDHVTLQAAADSYGVKVFVLTSFKDTCYIEILPHVPKSKRVIFL 327
+ Y + + WG + L+A + + +L + D I + P++ V+
Sbjct: 211 EEFGKYCDDIVNTAAWGGQLELRALSHILQTPIEILQA--DAPPIIVGEEYPRNPLVLVY 268
Query: 328 ---SFWAEVHYNSI 338
++ HYNS+
Sbjct: 269 MRHAYGLGEHYNSV 282
>sp|P54083|SBPA_AZOBR Multiple sugar-binding periplasmic protein SbpA OS=Azospirillum
brasilense GN=sbpA PE=1 SV=1
Length = 357
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 128 MDDSGRMVEADYQSKGEKVELEYDEDNMEDLLHQLDT 164
+DD MV+ +Q+KG K +L+Y ED++ + L Q++T
Sbjct: 47 IDDGNNMVK-QFQAKGYKTDLQYAEDDIPNQLAQIET 82
>sp|A1JKW9|MDTC_YERE8 Multidrug resistance protein MdtC OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=mdtC PE=3
SV=1
Length = 1024
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 135 VEADYQSKGEKVELEYDEDNMEDLLHQLDTTDESSVIDGELGKR 178
V +D Q KG ++ L YD + M L +D +D +++++ G+R
Sbjct: 693 VNSDQQDKGSEMALTYDRETMARL--GIDVSDANALLNNAFGQR 734
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,314,912
Number of Sequences: 539616
Number of extensions: 6244504
Number of successful extensions: 16315
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 16213
Number of HSP's gapped (non-prelim): 146
length of query: 358
length of database: 191,569,459
effective HSP length: 119
effective length of query: 239
effective length of database: 127,355,155
effective search space: 30437882045
effective search space used: 30437882045
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)