Query 018281
Match_columns 358
No_of_seqs 226 out of 2044
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 12:47:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018281.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018281hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 2.3E-18 8E-23 152.7 16.4 158 34-201 4-164 (195)
2 2nyi_A Unknown protein; protei 99.8 4.1E-18 1.4E-22 151.1 14.8 160 127-341 4-165 (195)
3 1u8s_A Glycine cleavage system 99.7 4.5E-17 1.5E-21 143.9 16.8 160 127-341 5-168 (192)
4 1u8s_A Glycine cleavage system 99.7 1.6E-16 5.4E-21 140.4 13.6 155 34-201 5-167 (192)
5 3p96_A Phosphoserine phosphata 98.9 2.5E-08 8.7E-13 97.6 17.1 151 34-200 11-166 (415)
6 3p96_A Phosphoserine phosphata 98.9 1.6E-07 5.5E-12 91.9 20.4 157 126-340 10-167 (415)
7 2f06_A Conserved hypothetical 98.5 3.5E-06 1.2E-10 70.1 13.6 109 36-172 7-116 (144)
8 2f06_A Conserved hypothetical 98.3 2.3E-05 8E-10 65.0 14.8 111 128-312 6-116 (144)
9 1zpv_A ACT domain protein; str 98.3 5.3E-06 1.8E-10 63.2 9.7 67 127-200 4-70 (91)
10 1zpv_A ACT domain protein; str 98.2 1.3E-05 4.4E-10 61.0 10.3 50 34-83 4-53 (91)
11 2ko1_A CTR148A, GTP pyrophosph 98.0 3.4E-05 1.2E-09 58.0 9.1 48 268-315 5-52 (88)
12 2ko1_A CTR148A, GTP pyrophosph 97.9 5.4E-05 1.9E-09 56.9 9.3 50 127-176 4-53 (88)
13 3obi_A Formyltetrahydrofolate 97.9 0.00021 7.1E-09 66.4 13.8 115 34-163 5-124 (288)
14 2re1_A Aspartokinase, alpha an 97.8 0.00031 1E-08 59.9 12.6 110 33-159 23-137 (167)
15 3n0v_A Formyltetrahydrofolate 97.8 0.0006 2.1E-08 63.2 15.0 48 34-81 7-56 (286)
16 3o1l_A Formyltetrahydrofolate 97.7 0.0002 7E-09 66.9 11.6 49 34-82 21-71 (302)
17 2re1_A Aspartokinase, alpha an 97.6 0.0016 5.3E-08 55.4 14.9 112 125-300 22-138 (167)
18 3nrb_A Formyltetrahydrofolate 97.6 0.0012 4.2E-08 61.2 15.0 48 34-81 6-55 (287)
19 3lou_A Formyltetrahydrofolate 97.6 0.00081 2.8E-08 62.5 13.8 48 34-81 9-58 (292)
20 3obi_A Formyltetrahydrofolate 97.5 0.00043 1.5E-08 64.3 9.7 67 127-199 5-73 (288)
21 3n0v_A Formyltetrahydrofolate 97.5 0.00049 1.7E-08 63.8 10.0 67 127-200 7-75 (286)
22 2dtj_A Aspartokinase; protein- 97.5 0.0013 4.5E-08 56.5 12.1 110 33-159 13-129 (178)
23 3nrb_A Formyltetrahydrofolate 97.4 0.00046 1.6E-08 64.0 9.3 66 126-199 5-72 (287)
24 3o1l_A Formyltetrahydrofolate 97.4 0.00046 1.6E-08 64.4 9.2 67 126-198 20-88 (302)
25 3lou_A Formyltetrahydrofolate 97.4 0.00052 1.8E-08 63.8 9.4 69 126-198 8-78 (292)
26 2dtj_A Aspartokinase; protein- 97.4 0.0091 3.1E-07 51.2 16.4 141 124-341 11-158 (178)
27 3l76_A Aspartokinase; alloster 97.3 0.021 7.3E-07 58.2 20.6 224 33-343 353-592 (600)
28 3l76_A Aspartokinase; alloster 97.2 0.064 2.2E-06 54.7 22.8 205 35-303 270-480 (600)
29 2dt9_A Aspartokinase; protein- 97.2 0.0025 8.5E-08 54.1 10.1 109 33-159 14-129 (167)
30 2f1f_A Acetolactate synthase i 97.1 0.0017 5.9E-08 55.1 8.7 63 128-198 3-67 (164)
31 2dt9_A Aspartokinase; protein- 97.0 0.023 8E-07 47.9 14.8 137 125-339 13-156 (167)
32 2pc6_A Probable acetolactate s 97.0 0.0024 8.1E-08 54.3 8.3 64 128-199 4-69 (165)
33 2f1f_A Acetolactate synthase i 96.9 0.0029 9.7E-08 53.7 8.0 63 270-339 5-69 (164)
34 3s1t_A Aspartokinase; ACT doma 96.8 0.011 3.6E-07 51.0 10.8 138 33-201 14-158 (181)
35 2jhe_A Transcription regulator 96.7 0.0041 1.4E-07 52.6 7.9 58 270-336 2-59 (190)
36 2fgc_A Acetolactate synthase, 96.6 0.1 3.5E-06 45.2 15.5 111 35-159 29-143 (193)
37 2pc6_A Probable acetolactate s 96.5 0.0077 2.6E-07 51.1 8.1 111 36-159 5-117 (165)
38 2fgc_A Acetolactate synthase, 96.4 0.011 3.8E-07 51.2 8.6 63 128-198 29-93 (193)
39 3s1t_A Aspartokinase; ACT doma 96.4 0.15 5E-06 43.7 15.4 139 126-341 14-159 (181)
40 3ab4_A Aspartokinase; aspartat 96.2 0.077 2.6E-06 51.7 14.4 109 34-159 263-378 (421)
41 2jhe_A Transcription regulator 96.1 0.032 1.1E-06 46.9 9.6 59 130-198 2-60 (190)
42 1y7p_A Hypothetical protein AF 95.9 0.018 6.1E-07 50.7 7.1 47 35-81 4-55 (223)
43 3ab4_A Aspartokinase; aspartat 95.6 0.58 2E-05 45.4 17.4 138 127-341 263-407 (421)
44 4go7_X Aspartokinase; transfer 95.5 0.084 2.9E-06 46.1 10.2 145 124-345 31-182 (200)
45 4go7_X Aspartokinase; transfer 95.5 0.019 6.4E-07 50.3 5.9 111 33-160 33-150 (200)
46 1y7p_A Hypothetical protein AF 95.5 0.021 7.1E-07 50.3 6.1 37 128-164 4-40 (223)
47 3c1m_A Probable aspartokinase; 95.4 0.088 3E-06 52.1 10.9 113 34-157 317-436 (473)
48 3c1m_A Probable aspartokinase; 93.6 1.7 5.9E-05 42.7 15.5 117 126-299 316-438 (473)
49 2qmx_A Prephenate dehydratase; 92.8 0.35 1.2E-05 44.4 8.5 54 267-321 199-253 (283)
50 3mwb_A Prephenate dehydratase; 91.3 0.48 1.7E-05 44.1 7.6 54 267-321 200-255 (313)
51 3luy_A Probable chorismate mut 91.1 1.1 3.6E-05 42.1 9.7 52 269-321 207-261 (329)
52 1ygy_A PGDH, D-3-phosphoglycer 91.1 0.77 2.6E-05 45.9 9.4 52 125-176 451-504 (529)
53 1sc6_A PGDH, D-3-phosphoglycer 90.8 0.59 2E-05 45.1 7.9 50 127-176 330-379 (404)
54 2qmw_A PDT, prephenate dehydra 90.6 0.74 2.5E-05 41.9 8.0 51 267-317 185-239 (267)
55 1sc6_A PGDH, D-3-phosphoglycer 90.3 0.83 2.8E-05 44.1 8.5 49 34-82 330-378 (404)
56 3tvi_A Aspartokinase; structur 90.1 0.53 1.8E-05 46.1 6.9 106 35-160 298-409 (446)
57 1ygy_A PGDH, D-3-phosphoglycer 89.7 0.99 3.4E-05 45.1 8.8 49 266-314 452-502 (529)
58 3tvi_A Aspartokinase; structur 87.5 2.5 8.5E-05 41.3 9.8 107 127-300 297-409 (446)
59 3k5p_A D-3-phosphoglycerate de 86.8 1.9 6.6E-05 41.7 8.4 50 126-175 341-390 (416)
60 3k5p_A D-3-phosphoglycerate de 86.8 2.7 9.3E-05 40.6 9.4 49 267-315 342-390 (416)
61 2cdq_A Aspartokinase; aspartat 86.6 11 0.00036 37.5 13.9 138 34-201 340-483 (510)
62 3mtj_A Homoserine dehydrogenas 85.7 1.6 5.3E-05 42.7 7.1 33 269-301 360-392 (444)
63 2qmx_A Prephenate dehydratase; 83.3 4.8 0.00017 36.7 8.9 65 127-198 199-264 (283)
64 3mah_A Aspartokinase; aspartat 82.7 1.7 5.8E-05 35.8 5.2 113 34-176 17-135 (157)
65 2qmw_A PDT, prephenate dehydra 82.2 6.5 0.00022 35.6 9.3 50 127-176 185-238 (267)
66 3mwb_A Prephenate dehydratase; 81.6 6.6 0.00023 36.4 9.3 50 127-176 200-251 (313)
67 3luy_A Probable chorismate mut 79.2 14 0.00049 34.3 10.8 52 128-181 206-260 (329)
68 2cdq_A Aspartokinase; aspartat 78.5 23 0.00077 35.1 12.6 138 127-340 340-483 (510)
69 1phz_A Protein (phenylalanine 74.6 4.8 0.00016 38.9 6.2 51 266-316 32-83 (429)
70 3mtj_A Homoserine dehydrogenas 73.5 3 0.0001 40.6 4.6 53 124-176 355-409 (444)
71 1phz_A Protein (phenylalanine 57.7 18 0.00061 34.9 6.4 52 125-176 31-83 (429)
72 3g12_A Putative lactoylglutath 50.3 52 0.0018 25.0 7.2 49 34-89 66-115 (128)
73 1tdj_A Biosynthetic threonine 48.0 77 0.0026 31.2 9.5 134 36-176 339-483 (514)
74 3g12_A Putative lactoylglutath 40.0 75 0.0026 24.1 6.6 49 267-322 66-115 (128)
75 1rwu_A Hypothetical UPF0250 pr 31.8 1.7E+02 0.0059 22.3 8.0 65 33-104 34-101 (109)
76 3mah_A Aspartokinase; aspartat 31.3 32 0.0011 27.9 3.1 34 126-159 16-52 (157)
77 2j0w_A Lysine-sensitive aspart 28.4 28 0.00095 33.8 2.6 104 34-157 307-416 (449)
78 3r6a_A Uncharacterized protein 28.0 1.4E+02 0.0048 23.1 6.5 46 270-322 68-113 (144)
79 1zhv_A Hypothetical protein AT 26.9 46 0.0016 26.6 3.2 34 267-300 61-97 (134)
80 1zhv_A Hypothetical protein AT 24.1 60 0.002 25.9 3.4 45 127-176 61-108 (134)
81 1ib8_A Conserved protein SP14. 24.0 2.9E+02 0.0098 22.5 7.8 71 281-355 14-88 (164)
82 3r6a_A Uncharacterized protein 23.2 1.7E+02 0.0059 22.6 6.2 47 36-89 67-113 (144)
83 3hdp_A Glyoxalase-I; glutathio 23.1 2.3E+02 0.0077 20.8 7.1 49 270-322 80-128 (133)
84 1zvp_A Hypothetical protein VC 23.0 89 0.003 24.8 4.2 34 267-300 70-106 (133)
85 1zvp_A Hypothetical protein VC 21.4 1.1E+02 0.0039 24.2 4.6 32 127-158 70-104 (133)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.79 E-value=2.3e-18 Score=152.66 Aligned_cols=158 Identities=16% Similarity=0.097 Sum_probs=115.3
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCC-c
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAG-A 112 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~~-~ 112 (358)
..++|+|+|+||||||++|+++|+.+||||++|++++..|.+.-.|.|..+.. ..+...+.|++.|........+ .
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~ 80 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAK---DGKLIQSALESALPGFQISTRRAS 80 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSS---SSHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCc---cchhHHHHHHHHHHHHHHhcCCeE
Confidence 46799999999999999999999999999999999986666655777764421 2223578899999754421100 1
Q ss_pred ccCCceeeeecCCCCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecC--CeeEEEEEEEeCCCCCCCCChHHHH
Q 018281 113 KTWPSKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHN--RRIACVLYVNDDTTCRAVGDQTRLS 190 (358)
Q Consensus 113 r~~~~~~v~~~~~~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~--~~~~d~F~v~~~~~g~~~~~~~~~~ 190 (358)
+..+.. . ......++|+|.|+|||||+++|+++|+++|+||.+++.+|.+ .+..+.|++.. ..+.+ +... +
T Consensus 81 ~~~~~~--~-~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~-~~~~~--~~~~-~ 153 (195)
T 2nyi_A 81 SVAERH--V-SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGS-RVAFP--FPLY-Q 153 (195)
T ss_dssp CC------C-CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEE-EEEEE--GGGH-H
T ss_pred EEEeCC--c-CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEE-EEEcC--CCcc-H
Confidence 100111 1 3344678999999999999999999999999999999999966 55667888776 33322 2344 7
Q ss_pred HHHHHHHHHHc
Q 018281 191 LMEEQLKNILR 201 (358)
Q Consensus 191 ~L~~~L~~~L~ 201 (358)
.|++.|.....
T Consensus 154 ~l~~~l~~~a~ 164 (195)
T 2nyi_A 154 EVVTALSRVEE 164 (195)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78888886543
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.77 E-value=4.1e-18 Score=151.08 Aligned_cols=160 Identities=13% Similarity=0.108 Sum_probs=116.1
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHcCCCCC
Q 018281 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILRGCDDE 206 (358)
Q Consensus 127 ~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L~~~~~~ 206 (358)
..++|+|+|+|||||+++|+++|+++|+||.++++++..+.+.-.|.+..+ .. ....+++.|++.|...+.+ .
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~--~~--~~~~~~~~l~~~L~~~~~~-~-- 76 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLN--AK--DGKLIQSALESALPGFQIS-T-- 76 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SS--SSHHHHHHHHHHSTTCEEE-E--
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEec--Cc--cchhHHHHHHHHHHHHHHh-c--
Confidence 467999999999999999999999999999999999977776668888762 21 1223445555555432211 0
Q ss_pred cchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeCCcchhHHHHH
Q 018281 207 DSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCRDRAKLMFDIV 286 (358)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~DrpGLL~~I~ 286 (358)
. + ..++ + . .+ . ......++|+|.|+|||||+++|+
T Consensus 77 ------~--~-------~~~~-------~---------------~---~~----~-~~~~~~~iltv~g~DrpGiva~Vt 111 (195)
T 2nyi_A 77 ------R--R-------ASSV-------A---------------E---RH----V-SPDTREYELYVEGPDSEGIVEAVT 111 (195)
T ss_dssp ------E--E-------CCCC---------------------------------C-CTTEEEEEEEEEEECCTTHHHHHH
T ss_pred ------C--C-------eEEE-------E---------------e---CC----c-CCCCcEEEEEEEeCCCcCHHHHHH
Confidence 0 0 0011 0 0 01 0 233467889999999999999999
Q ss_pred HHhhcCCeEEEEEEEEecC--CceEEEEEEEeCCCCcCCCHHHHHHHHHHHHHHHhh
Q 018281 287 CTLTDMQYVVFHAAISSDG--PHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR 341 (358)
Q Consensus 287 ~~l~~~~v~I~~a~i~T~g--~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~~ 341 (358)
++|+++|+||..++..|.+ +++.+.|+++...+.+ ++.. +.|+++|.....+
T Consensus 112 ~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~a~~ 165 (195)
T 2nyi_A 112 AVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRVEEE 165 (195)
T ss_dssp HHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHHHHH
Confidence 9999999999999999998 7789999998766544 2334 7788887765544
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.74 E-value=4.5e-17 Score=143.92 Aligned_cols=160 Identities=13% Similarity=0.169 Sum_probs=117.8
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHcCCCCC
Q 018281 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILRGCDDE 206 (358)
Q Consensus 127 ~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L~~~~~~ 206 (358)
..++|+|.|+||||++++|+++|+++|+||.++++++..+.+...|.+..+ ...++.|++.|...+.. ..
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~--------~~~~~~l~~~L~~~~~~-~~- 74 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS--------PSNITRVETTLPLLGQQ-HD- 74 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC--------HHHHHHHHHHHHHHHHH-HT-
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC--------CCCHHHHHHHHHHHHHh-cC-
Confidence 457899999999999999999999999999999999977877778888762 13567888888875522 11
Q ss_pred cchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeCCcchhHHHHH
Q 018281 207 DSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCRDRAKLMFDIV 286 (358)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~DrpGLL~~I~ 286 (358)
+...+ ++.. + ++ +......++|+|.|+||||++++|+
T Consensus 75 -----~~~~~--------~~~~------~-------------------~~-----~~~~~~~~~l~v~~~D~~Gil~~v~ 111 (192)
T 1u8s_A 75 -----LITMM--------KRTS------P-------------------HD-----HQTHAYTVEVYVESDDKLGLTEKFT 111 (192)
T ss_dssp -----CEEEE--------EEEC------C-------------------CC-----CCCCSEEEEEEEEESCCTTHHHHHH
T ss_pred -----CEEEE--------EeCC------C-------------------CC-----CccCCceEEEEEEeCCCccHHHHHH
Confidence 11111 1110 0 01 1333466789999999999999999
Q ss_pred HHhhcCCeEEEEEEEEecCC----ceEEEEEEEeCCCCcCCCHHHHHHHHHHHHHHHhh
Q 018281 287 CTLTDMQYVVFHAAISSDGP----HASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR 341 (358)
Q Consensus 287 ~~l~~~~v~I~~a~i~T~g~----~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~~ 341 (358)
++|+++|+||..++..|.++ ++.+.|+++...+.+ ++...+.|+++|.....+
T Consensus 112 ~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~--~~~~~~~l~~~l~~~~~~ 168 (192)
T 1u8s_A 112 QFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD--SGCNLMQLQEEFDALCTA 168 (192)
T ss_dssp HHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC--TTSCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC--CCCCHHHHHHHHHHHHHH
Confidence 99999999999999999985 689999998765433 223567888888765554
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.70 E-value=1.6e-16 Score=140.37 Aligned_cols=155 Identities=16% Similarity=0.207 Sum_probs=108.6
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCC---CCCC
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKG---HITA 110 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~---~~~~ 110 (358)
..++|+|+|+||||+|++|+++|+.+|+||.++++++.+|.+.-.|.|..+. ...+.|++.|.... ....
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~-------~~~~~l~~~L~~~~~~~~~~~ 77 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP-------SNITRVETTLPLLGQQHDLIT 77 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH-------HHHHHHHHHHHHHHHHHTCEE
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC-------CCHHHHHHHHHHHHHhcCCEE
Confidence 3578999999999999999999999999999999999777777678886431 24455665554221 1111
Q ss_pred Cc-ccCCceeeeecCCCCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCC----eeEEEEEEEeCCCCCCCCC
Q 018281 111 GA-KTWPSKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNR----RIACVLYVNDDTTCRAVGD 185 (358)
Q Consensus 111 ~~-r~~~~~~v~~~~~~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~----~~~d~F~v~~~~~g~~~~~ 185 (358)
.. +...+. .......++|+|.|+||||++++|+++|+++|+||.+++..|.+. +..+.|+++. ..+.+ +
T Consensus 78 ~~~~~~~~~---~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~-~~~~~--~ 151 (192)
T 1u8s_A 78 MMKRTSPHD---HQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAI-SARVD--S 151 (192)
T ss_dssp EEEEECCCC---CCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEE-EEEEC--T
T ss_pred EEEeCCCCC---CccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEE-EEeCC--C
Confidence 00 111110 123346789999999999999999999999999999999999763 4667777766 22222 1
Q ss_pred hHHHHHHHHHHHHHHc
Q 018281 186 QTRLSLMEEQLKNILR 201 (358)
Q Consensus 186 ~~~~~~L~~~L~~~L~ 201 (358)
....+.|++.|.....
T Consensus 152 ~~~~~~l~~~l~~~~~ 167 (192)
T 1u8s_A 152 GCNLMQLQEEFDALCT 167 (192)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 2345778888876543
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.93 E-value=2.5e-08 Score=97.59 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=100.6
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHC---CCCCCCC
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALG---PKGHITA 110 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~---~~~~~~~ 110 (358)
..++|+|.|+|||||.+.|+++|+.+||||.+.+.++.+|++.-...+.-+... .. .+.|++.|. +.+....
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-~~----~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-AD----GPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-HT----SHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-CC----HHHHHHHHHHHHHHcCeEE
Confidence 467899999999999999999999999999999999988887655555422111 01 134444443 2222211
Q ss_pred Ccc-cCCceeeeecCCCCeEEEEEEeCC-cccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHH
Q 018281 111 GAK-TWPSKQVGVHSVGDHTAIELIGRD-RPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTR 188 (358)
Q Consensus 111 ~~r-~~~~~~v~~~~~~~~t~v~V~~~D-rpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~ 188 (358)
..+ ...... .....+..+++.+++ +||++.+|+.++.++|+||...+..+......-.|.+..+ . .+
T Consensus 86 ~~~~~~~~~~---~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~~-~----~~--- 154 (415)
T 3p96_A 86 SIERSDDVPI---IREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSVP-P----GA--- 154 (415)
T ss_dssp EEEECSSSCS---SCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEECC-T----TC---
T ss_pred EEEECCcccc---cCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEeeCC-C----CC---
Confidence 111 001100 133467899999999 9999999999999999999988887744444444666552 1 11
Q ss_pred HHHHHHHHHHHH
Q 018281 189 LSLMEEQLKNIL 200 (358)
Q Consensus 189 ~~~L~~~L~~~L 200 (358)
.+.++..|.+.+
T Consensus 155 ~~~l~~~l~~l~ 166 (415)
T 3p96_A 155 DEALRTALNRVS 166 (415)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 245666666544
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.87 E-value=1.6e-07 Score=91.86 Aligned_cols=157 Identities=14% Similarity=0.065 Sum_probs=104.5
Q ss_pred CCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHcCCCC
Q 018281 126 GDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILRGCDD 205 (358)
Q Consensus 126 ~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L~~~~~ 205 (358)
...++|+|.|+||||+++.|+++|+++|+||.+...++.+|.+.-...+..+ .. ....+.|++.|... ..+..
T Consensus 10 ~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~-~~-----~~~~~~l~~~l~~~-~~~~~ 82 (415)
T 3p96_A 10 KVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCP-AD-----VADGPALRHDVEAA-IRKVG 82 (415)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEEC-HH-----HHTSHHHHHHHHHH-HHHTT
T ss_pred CCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEec-CC-----cCCHHHHHHHHHHH-HHHcC
Confidence 3567999999999999999999999999999999999988887666666552 11 01236688887753 33232
Q ss_pred CcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeCC-cchhHHH
Q 018281 206 EDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCRD-RAKLMFD 284 (358)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~D-rpGLL~~ 284 (358)
+...+ .+. +. ...+ .......+.+.++| +||++.+
T Consensus 83 ------~~~~~--------~~~----------~~-------------~~~~-------~~~~~~~~~llg~~~~~~~~~~ 118 (415)
T 3p96_A 83 ------LDVSI--------ERS----------DD-------------VPII-------REPSTHTIFVLGRPITAAAFGA 118 (415)
T ss_dssp ------CEEEE--------EEC----------SS-------------SCSS-------CCCCSEEEEEEESSCCHHHHHH
T ss_pred ------eEEEE--------EEC----------Cc-------------cccc-------CCCCcEEEEEEeCCCCHHHHHH
Confidence 12111 000 00 0000 11244569999999 9999999
Q ss_pred HHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcCCCHHHHHHHHHHHHHHHh
Q 018281 285 IVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIR 340 (358)
Q Consensus 285 I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~ 340 (358)
|+.+|.++|+||.....-+......-.|++... + ...++++.+|.....
T Consensus 119 i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~~---~----~~~~~l~~~l~~l~~ 167 (415)
T 3p96_A 119 VAREVAALGVNIDLIRGVSDYPVIGLELRVSVP---P----GADEALRTALNRVSS 167 (415)
T ss_dssp HHHHHHHTTCEEEEEEEEESSSSEEEEEEEECC---T----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccceeeccCCCceEEEEEeeCC---C----CCHHHHHHHHHHHhh
Confidence 999999999999998877744444444777532 2 124556666555443
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.45 E-value=3.5e-06 Score=70.13 Aligned_cols=109 Identities=20% Similarity=0.176 Sum_probs=72.8
Q ss_pred EEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEe-eCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCCccc
Q 018281 36 TVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS-DGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAGAKT 114 (358)
Q Consensus 36 ~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t-~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~~~r~ 114 (358)
..|+|..+|+||.++++++.|++.|+||..-.+.. .+.. +-.|.+. +. +..++.|... ...
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~-~~~~~~~--------d~---~~a~~~L~~~-G~~----- 68 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFG-ILRGIVS--------DP---DKAYKALKDN-HFA----- 68 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCE-EEEEEES--------CH---HHHHHHHHHT-TCC-----
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCC-EEEEEeC--------CH---HHHHHHHHHc-CCe-----
Confidence 57889999999999999999999999999887764 3321 2224321 11 2223333321 110
Q ss_pred CCceeeeecCCCCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEE
Q 018281 115 WPSKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVL 172 (358)
Q Consensus 115 ~~~~~v~~~~~~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F 172 (358)
. ....++.+..+|+||.+++++++|++.|+||.....+..++...-.|
T Consensus 69 ---v-------~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i 116 (144)
T 2f06_A 69 ---V-------NITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVI 116 (144)
T ss_dssp ---E-------EEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEE
T ss_pred ---E-------eeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEE
Confidence 0 01246777889999999999999999999998766653233333333
No 8
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.28 E-value=2.3e-05 Score=65.03 Aligned_cols=111 Identities=15% Similarity=0.100 Sum_probs=72.7
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHcCCCCCc
Q 018281 128 HTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILRGCDDED 207 (358)
Q Consensus 128 ~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L~~~~~~~ 207 (358)
...++|..+|+||.++++++.|++.|+||....+....+... +.++.. +++ ..++.|.+. + ..
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~--~~~~~~-------d~~---~a~~~L~~~--G-~~-- 68 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGI--LRGIVS-------DPD---KAYKALKDN--H-FA-- 68 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEE--EEEEES-------CHH---HHHHHHHHT--T-CC--
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCE--EEEEeC-------CHH---HHHHHHHHc--C-Ce--
Confidence 357889999999999999999999999999877753222111 222221 222 233333321 1 00
Q ss_pred chhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeCCcchhHHHHHH
Q 018281 208 SEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCRDRAKLMFDIVC 287 (358)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~DrpGLL~~I~~ 287 (358)
. . .+.++-+..+|+||.+++|++
T Consensus 69 -------------------v-------~-------------------------------~~svv~v~~~d~pGvla~i~~ 91 (144)
T 2f06_A 69 -------------------V-------N-------------------------------ITDVVGISCPNVPGALAKVLG 91 (144)
T ss_dssp -------------------E-------E-------------------------------EEEEEEEEEESSTTHHHHHHH
T ss_pred -------------------E-------e-------------------------------eeeEEEEEeCCCCcHHHHHHH
Confidence 0 0 113577788999999999999
Q ss_pred HhhcCCeEEEEEEEEecCCceEEEE
Q 018281 288 TLTDMQYVVFHAAISSDGPHASQEY 312 (358)
Q Consensus 288 ~l~~~~v~I~~a~i~T~g~~a~d~F 312 (358)
+|++.|+||.+......+.++.=.|
T Consensus 92 ~L~~~~InI~~~~~~~~~~~~~~~i 116 (144)
T 2f06_A 92 FLSAEGVFIEYMYSFANNNVANVVI 116 (144)
T ss_dssp HHHHTTCCEEEEEEEEETTEEEEEE
T ss_pred HHHHCCCCEEEEEEEccCCcEEEEE
Confidence 9999999998766553334444333
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.27 E-value=5.3e-06 Score=63.23 Aligned_cols=67 Identities=15% Similarity=0.345 Sum_probs=53.3
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHH
Q 018281 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNIL 200 (358)
Q Consensus 127 ~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L 200 (358)
..+.++|.++||||++++|+++|+++|+||.+....+.++.+.-.+.+..+ + ...++.|.+.|.+..
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~-~------~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD-E------KQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES-S------CCCHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC-C------CCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999998876777777777552 1 123567777777543
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.19 E-value=1.3e-05 Score=61.02 Aligned_cols=50 Identities=20% Similarity=0.213 Sum_probs=43.6
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEe
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVID 83 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~ 83 (358)
....|+|.|+||||++++|+++|+.+|+||.+....+.+|.+.-.+.+.-
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~ 53 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSS 53 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEe
Confidence 35689999999999999999999999999999999987787776666643
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.99 E-value=3.4e-05 Score=58.01 Aligned_cols=48 Identities=6% Similarity=0.079 Sum_probs=40.5
Q ss_pred eeEEEEEeCCcchhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEE
Q 018281 268 YSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIR 315 (358)
Q Consensus 268 ~t~l~v~~~DrpGLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~ 315 (358)
.+.|.|.+.||||+|++|+++|++.|+||.++.+.+.++.+...|.+.
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~ 52 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIF 52 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEE
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEE
Confidence 356899999999999999999999999999999988666555555554
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.93 E-value=5.4e-05 Score=56.86 Aligned_cols=50 Identities=18% Similarity=0.381 Sum_probs=41.8
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEe
Q 018281 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVND 176 (358)
Q Consensus 127 ~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~ 176 (358)
-.+.+.|.++||||+|++|+++|++.|+||.+..+.+.++.+...|.+..
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~ 53 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFV 53 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEE
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEE
Confidence 35678999999999999999999999999999999886555555565555
No 13
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.87 E-value=0.00021 Score=66.43 Aligned_cols=115 Identities=13% Similarity=0.119 Sum_probs=70.8
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEe--eCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHC---CCCCC
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS--DGGWFMDVFHVIDQQGKKITDGKTIDYIEKALG---PKGHI 108 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t--~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~---~~~~~ 108 (358)
..+.|+|.|+|||||.++|++.|+++||||.+.+.++ .+|++.-...+.-+.+. .+ .+.|++.|. ..+..
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~-~~----~~~L~~~f~~la~~~~m 79 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV-IP----LASLRTGFGVIAAKFTM 79 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC-CC----HHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC-CC----HHHHHHHHHHHHHHcCC
Confidence 3478999999999999999999999999999999986 47877655555433321 11 344555443 22221
Q ss_pred CCCcccCCceeeeecCCCCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEe
Q 018281 109 TAGAKTWPSKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT 163 (358)
Q Consensus 109 ~~~~r~~~~~~v~~~~~~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T 163 (358)
.+..........|-|...-+-.-|.+|......-.+++.-+-+.+
T Consensus 80 ----------~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 124 (288)
T 3obi_A 80 ----------GWHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVS 124 (288)
T ss_dssp ----------EEEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred ----------EEEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEc
Confidence 112221222334444444445567777777766666554444444
No 14
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.79 E-value=0.00031 Score=59.88 Aligned_cols=110 Identities=14% Similarity=0.180 Sum_probs=75.2
Q ss_pred CCeEEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEe-eCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCC
Q 018281 33 PECTVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISS-DGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITA 110 (358)
Q Consensus 33 ~~~~~v~v~-~~DrpGLl~~i~~~L~~~glnI~~A~I~t-~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~ 110 (358)
.+...|+|. .+|+||.+++|..+|+.+|+||.--.... .+|...-+|.|...+. +...+.|++ +...+...
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~~-----~~a~~~l~~-~~~~l~~~- 95 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDY-----KQTLEILSE-RQDSIGAA- 95 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGGH-----HHHHHHHHH-SSTTTTCS-
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechHH-----HHHHHHHHH-HHHHcCCc-
Confidence 366788888 59999999999999999999998765542 3465555677742111 122233332 32222210
Q ss_pred CcccCCceeeeecCCCCeEEEEEEeCC---cccHHHHHHHHHHhCCCcEEEE
Q 018281 111 GAKTWPSKQVGVHSVGDHTAIELIGRD---RPGLLSEISAVLANLRFNVAAA 159 (358)
Q Consensus 111 ~~r~~~~~~v~~~~~~~~t~v~V~~~D---rpGLL~~I~~~L~~~g~nI~~A 159 (358)
.+ ....+...+.|.+.+ +||+++++..+|.+.|+||...
T Consensus 96 --------~i--~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 96 --------SI--DGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp --------EE--EEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred --------eE--EecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 11 223477899999887 9999999999999999999873
No 15
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.76 E-value=0.0006 Score=63.22 Aligned_cols=48 Identities=15% Similarity=0.133 Sum_probs=41.2
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEe--eCCEEEEEEEE
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS--DGGWFMDVFHV 81 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t--~~g~~~d~f~V 81 (358)
..+.|+|.|+|||||.++|++.|+++|+||.+.+.++ ..|++.-...+
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~ 56 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEF 56 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEE
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEE
Confidence 3478999999999999999999999999999999997 46777644444
No 16
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.74 E-value=0.0002 Score=66.85 Aligned_cols=49 Identities=24% Similarity=0.367 Sum_probs=42.0
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEee--CCEEEEEEEEE
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSD--GGWFMDVFHVI 82 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~--~g~~~d~f~V~ 82 (358)
....++|.|+|||||.++|++.|+++||||.+++.++. +|++.-...+.
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~ 71 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIR 71 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEe
Confidence 45789999999999999999999999999999999984 78776544443
No 17
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.64 E-value=0.0016 Score=55.41 Aligned_cols=112 Identities=14% Similarity=0.078 Sum_probs=73.6
Q ss_pred CCCeEEEEEE-eCCcccHHHHHHHHHHhCCCcEEEEEEEe-cCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHcC
Q 018281 125 VGDHTAIELI-GRDRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILRG 202 (358)
Q Consensus 125 ~~~~t~v~V~-~~DrpGLL~~I~~~L~~~g~nI~~A~i~T-~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L~~ 202 (358)
..+...|+|. .+|+||.+++|..+|+++|+||....... .+|...-.|.|... +. ++..+.|.+ +..
T Consensus 22 ~~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~-------~~---~~a~~~l~~-~~~ 90 (167)
T 2re1_A 22 DKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG-------DY---KQTLEILSE-RQD 90 (167)
T ss_dssp ECCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG-------GH---HHHHHHHHH-SST
T ss_pred cCCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech-------HH---HHHHHHHHH-HHH
Confidence 3466788888 49999999999999999999998655432 23433444555431 11 223333333 111
Q ss_pred CCCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeCC---cc
Q 018281 203 CDDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCRD---RA 279 (358)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~D---rp 279 (358)
+.. . ..|.+.+ +.+.+.|.+.+ +|
T Consensus 91 ~l~------------------------------------------------~-~~i~~~~----~~a~vsvvG~~m~~~~ 117 (167)
T 2re1_A 91 SIG------------------------------------------------A-ASIDGDD----TVCKVSAVGLGMRSHV 117 (167)
T ss_dssp TTT------------------------------------------------C-SEEEEES----SEEEEEEECSSCTTCC
T ss_pred HcC------------------------------------------------C-ceEEecC----CEEEEEEECCCcCCCc
Confidence 111 0 1233322 56789999877 99
Q ss_pred hhHHHHHHHhhcCCeEEEEEE
Q 018281 280 KLMFDIVCTLTDMQYVVFHAA 300 (358)
Q Consensus 280 GLL~~I~~~l~~~~v~I~~a~ 300 (358)
|+++++.++|.+.|++|.+..
T Consensus 118 Gv~a~i~~aL~~~~InI~~is 138 (167)
T 2re1_A 118 GVAAKIFRTLAEEGINIQMIS 138 (167)
T ss_dssp CHHHHHHHHHHHTTCCCCEEE
T ss_pred CHHHHHHHHHHHCCCcEEEEE
Confidence 999999999999999999943
No 18
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.63 E-value=0.0012 Score=61.18 Aligned_cols=48 Identities=25% Similarity=0.240 Sum_probs=41.3
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEe--eCCEEEEEEEE
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS--DGGWFMDVFHV 81 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t--~~g~~~d~f~V 81 (358)
..+.+++.|+|||||.++|++.|+++||||.+.+.++ .+|++.-...+
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~ 55 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSV 55 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEE
Confidence 4578999999999999999999999999999999986 47777644433
No 19
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.63 E-value=0.00081 Score=62.51 Aligned_cols=48 Identities=13% Similarity=0.096 Sum_probs=41.2
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEe--eCCEEEEEEEE
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS--DGGWFMDVFHV 81 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t--~~g~~~d~f~V 81 (358)
..+.+++.|+|||||.++|++.|+++|+||.+.+.++ ..|++.-...+
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~ 58 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVF 58 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEE
Confidence 4578999999999999999999999999999999997 46777644433
No 20
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.48 E-value=0.00043 Score=64.29 Aligned_cols=67 Identities=18% Similarity=0.241 Sum_probs=50.6
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEe--cCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHH
Q 018281 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT--HNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNI 199 (358)
Q Consensus 127 ~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T--~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~ 199 (358)
..++++|.|+||||+++.|+++|+++|+||.+...++ ..|.+.-...+..+ .. .. ..+.|++.|...
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~-~~-~~----~~~~L~~~f~~l 73 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAA-AK-VI----PLASLRTGFGVI 73 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEES-SC-CC----CHHHHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcC-CC-CC----CHHHHHHHHHHH
Confidence 4578999999999999999999999999999999975 56666555555442 11 12 246688877653
No 21
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.47 E-value=0.00049 Score=63.83 Aligned_cols=67 Identities=10% Similarity=0.028 Sum_probs=50.4
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEe--cCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHH
Q 018281 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT--HNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNIL 200 (358)
Q Consensus 127 ~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T--~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L 200 (358)
..++++|.|+||||+++.|+++|+++|+||.+...++ ..+++.-...+..+ . .. ..+.|++.|....
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~-~--~~----~~~~L~~~f~~la 75 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQP-D--DF----DEAGFRAGLAERS 75 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC-S--SC----CHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecC-C--CC----CHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999986 45665444444331 1 12 2467888887543
No 22
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.47 E-value=0.0013 Score=56.51 Aligned_cols=110 Identities=18% Similarity=0.162 Sum_probs=73.6
Q ss_pred CCeEEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEee---CCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCC
Q 018281 33 PECTVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISSD---GGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHI 108 (358)
Q Consensus 33 ~~~~~v~v~-~~DrpGLl~~i~~~L~~~glnI~~A~I~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~ 108 (358)
.+.+.|+|. .+|+||.+++|...|++.|+||.--...+. +|..--.|.+... ..++..+.|.....
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~---------d~~~a~~~l~~~~~- 82 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRS---------DGRRAMEILKKLQV- 82 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHH---------HHHHHHHHHHTTTT-
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccc---------cHHHHHHHHHHHHH-
Confidence 467788884 699999999999999999999986655542 3333334776531 11223334433111
Q ss_pred CCCcccCCceeeeecCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCCcEEEE
Q 018281 109 TAGAKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAA 159 (358)
Q Consensus 109 ~~~~r~~~~~~v~~~~~~~~t~v~V~~~---DrpGLL~~I~~~L~~~g~nI~~A 159 (358)
.. ... .+ ....+...|.|.|. ++||+++++..+|++.|+||...
T Consensus 83 ~~----~~~-~v--~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~i 129 (178)
T 2dtj_A 83 QG----NWT-NV--LYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 129 (178)
T ss_dssp TT----TCS-EE--EEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred hc----CCC-eE--EEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 00 011 11 22346778888876 89999999999999999999873
No 23
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.44 E-value=0.00046 Score=64.05 Aligned_cols=66 Identities=20% Similarity=0.313 Sum_probs=48.2
Q ss_pred CCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEe--cCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHH
Q 018281 126 GDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT--HNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNI 199 (358)
Q Consensus 126 ~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T--~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~ 199 (358)
...+++++.|+||||+++.|+++|+++|+||.++..++ ..|++.-...+..+ + . .++.|++.|...
T Consensus 5 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~--~--~----~~~~L~~~f~~l 72 (287)
T 3nrb_A 5 NNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIP--V--A----GVNDFNSAFGKV 72 (287)
T ss_dssp TTEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC--C---------CHHHHHHHHH
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcC--C--C----CHHHHHHHHHHH
Confidence 34679999999999999999999999999999999985 45665444433331 1 1 134677777653
No 24
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.43 E-value=0.00046 Score=64.44 Aligned_cols=67 Identities=15% Similarity=0.117 Sum_probs=49.5
Q ss_pred CCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEec--CCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 018281 126 GDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTH--NRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKN 198 (358)
Q Consensus 126 ~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~--~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~ 198 (358)
...++++|.|+||||+++.|+++|+++|+||.++..++. .|++.....+..+ .... ..+.|++.|..
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~--~~~~----~~~~L~~~l~~ 88 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRAD--TLPF----DLDGFREAFTP 88 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGG--GSSS----CHHHHHHHHHH
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecC--CCCC----CHHHHHHHHHH
Confidence 355799999999999999999999999999999999873 5665544444331 1111 24667777764
No 25
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.42 E-value=0.00052 Score=63.82 Aligned_cols=69 Identities=13% Similarity=0.204 Sum_probs=48.9
Q ss_pred CCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEe--cCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 018281 126 GDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT--HNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKN 198 (358)
Q Consensus 126 ~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T--~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~ 198 (358)
...+++++.|+||||++++|+++|+++|+||.++..++ ..|++.-...+..+...... ..+.|++.|..
T Consensus 8 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~----~~~~L~~~f~~ 78 (292)
T 3lou_A 8 PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADAL----RVDALRREFEP 78 (292)
T ss_dssp CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----C----CHHHHHHHHHH
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCC----CHHHHHHHHHH
Confidence 34679999999999999999999999999999999986 55665444444331001011 24667777764
No 26
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.39 E-value=0.0091 Score=51.17 Aligned_cols=141 Identities=11% Similarity=0.125 Sum_probs=87.1
Q ss_pred CCCCeEEEEEE-eCCcccHHHHHHHHHHhCCCcEEEEEEEec---CCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHH
Q 018281 124 SVGDHTAIELI-GRDRPGLLSEISAVLANLRFNVAAAEVWTH---NRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNI 199 (358)
Q Consensus 124 ~~~~~t~v~V~-~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~---~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~ 199 (358)
...+.+.|+|. .+|+||.+++|...|++.|+||......+. ++...-.|.+.. ...++..+.|.+
T Consensus 11 ~~~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~----------~d~~~a~~~l~~- 79 (178)
T 2dtj_A 11 TDKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR----------SDGRRAMEILKK- 79 (178)
T ss_dssp EECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH----------HHHHHHHHHHHT-
T ss_pred ecCCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc----------ccHHHHHHHHHH-
Confidence 34466777874 689999999999999999999986655543 333333355544 112222233322
Q ss_pred HcCCCCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeC---
Q 018281 200 LRGCDDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCR--- 276 (358)
Q Consensus 200 L~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~--- 276 (358)
+..... ...|.+.+ +.+.|.|.+.
T Consensus 80 ~~~~~~-------------------------------------------------~~~v~~~~----~~a~VsvVG~gm~ 106 (178)
T 2dtj_A 80 LQVQGN-------------------------------------------------WTNVLYDD----QVGKVSLVGAGMK 106 (178)
T ss_dssp TTTTTT-------------------------------------------------CSEEEEES----CEEEEEEEEECCT
T ss_pred HHHhcC-------------------------------------------------CCeEEEeC----CeEEEEEEcCCcc
Confidence 111000 01233332 5667888875
Q ss_pred CcchhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcCCCHHHHHHHHHHHHHHHhh
Q 018281 277 DRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR 341 (358)
Q Consensus 277 DrpGLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~~ 341 (358)
++||+++++.++|++.||||.+.. |- + ..-.|.|.. +..++..++|.+.+..
T Consensus 107 ~~~Gv~arif~aLa~~~InI~~is--tS-e-~~Is~vV~~---------~d~~~Av~~Lh~~F~l 158 (178)
T 2dtj_A 107 SHPGVTAEFMEALRDVNVNIELIS--TS-E-IRISVLIRE---------DDLDAAARALHEQFQL 158 (178)
T ss_dssp TCHHHHHHHHHHHHHTTCCCCEEE--EE-T-TEEEEEEEG---------GGHHHHHHHHHHHHTC
T ss_pred cCccHHHHHHHHHHHCCCCEEEEE--cC-C-CeEEEEEeH---------HHHHHHHHHHHHHHcc
Confidence 899999999999999999999854 32 2 333455532 3455555666666643
No 27
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.29 E-value=0.021 Score=58.20 Aligned_cols=224 Identities=15% Similarity=0.135 Sum_probs=133.2
Q ss_pred CCeEEEEEEec---CCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCC
Q 018281 33 PECTVVKVDSV---NKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHIT 109 (358)
Q Consensus 33 ~~~~~v~v~~~---DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~ 109 (358)
.+...|.|++. .+||+.+++..+|+..|+||.--. +. ..- -+|.|...+. +...+.|.+.+.... .+
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS-e~~-Is~vI~~~d~-----~~Av~aLh~~f~~~~-t~ 422 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS-EVK-VSCVIDQRDA-----DRAIAALSNAFGVTL-SP 422 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC-SSE-EEEEEEGGGH-----HHHHHHHHHHTTCCB-CC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC-CCE-EEEEEcHHHH-----HHHHHHHHHhhcccC-CC
Confidence 46789999975 799999999999999999997554 33 322 2355543211 245666777765321 11
Q ss_pred CCcccC-C-ceee-eecCCCCeEEEEEE-eCCcccHHHHHHHHHHhCCCcEEEEEEEec----CC--eeEEEEEEEeCCC
Q 018281 110 AGAKTW-P-SKQV-GVHSVGDHTAIELI-GRDRPGLLSEISAVLANLRFNVAAAEVWTH----NR--RIACVLYVNDDTT 179 (358)
Q Consensus 110 ~~~r~~-~-~~~v-~~~~~~~~t~v~V~-~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~----~~--~~~d~F~v~~~~~ 179 (358)
...+.. . ...| ......+...|+|. .+|+||+.++|.+.|+++|+||..-..... +| ...-.|.+..
T Consensus 423 ~~~~~~~~~~~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~--- 499 (600)
T 3l76_A 423 PKNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE--- 499 (600)
T ss_dssp CCCCCC---CCSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH---
T ss_pred ccccccccccCceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH---
Confidence 000000 0 0011 12234466677765 589999999999999999999964444321 24 2333455544
Q ss_pred CCCCCChHHHHHHHHHHHHHHcCCCCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEE
Q 018281 180 CRAVGDQTRLSLMEEQLKNILRGCDDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEIT 259 (358)
Q Consensus 180 g~~~~~~~~~~~L~~~L~~~L~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 259 (358)
+.++...+.|.+ +..... ..+|.
T Consensus 500 -------~d~~~a~~~l~~-~~~~~~-------------------------------------------------~~~v~ 522 (600)
T 3l76_A 500 -------GDSSQAEAILQP-LIKDWL-------------------------------------------------DAAIV 522 (600)
T ss_dssp -------HHHHHHHHHHHH-HTTTST-------------------------------------------------TCEEE
T ss_pred -------HHHHHHHHHHHH-HHHhcC-------------------------------------------------CceEE
Confidence 233333333333 221111 01244
Q ss_pred EecCCCCceeEEEEEe---CCcchhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcCCCHHHHHHHHHHHH
Q 018281 260 VERLEDKGYSVVNVKC---RDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLE 336 (358)
Q Consensus 260 v~n~~~~~~t~l~v~~---~DrpGLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~ 336 (358)
+++ +...|.|.+ ..+||+.+++-++|++.||||.+.. |- + ..=.+.|.. +..++.-++|.
T Consensus 523 ~~~----~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis--tS-E-i~Is~vV~~---------~~~~~Av~alh 585 (600)
T 3l76_A 523 VNK----AIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA--TS-E-IKISCVVPQ---------DRGVDALKAAH 585 (600)
T ss_dssp EEC----CEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE--EC-S-SEEEEEEEG---------GGHHHHHHHHH
T ss_pred EeC----CeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE--cC-C-ceEEEEEeH---------HHHHHHHHHHH
Confidence 433 567788876 6999999999999999999998877 21 1 122344442 34455556777
Q ss_pred HHHhhcc
Q 018281 337 AAIRRRV 343 (358)
Q Consensus 337 ~~l~~~~ 343 (358)
.++.-..
T Consensus 586 ~~F~l~~ 592 (600)
T 3l76_A 586 SAFNLAG 592 (600)
T ss_dssp HHTTTTS
T ss_pred HHhCCCC
Confidence 7765433
No 28
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.19 E-value=0.064 Score=54.67 Aligned_cols=205 Identities=13% Similarity=0.138 Sum_probs=119.2
Q ss_pred eEEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEe-eCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCCc
Q 018281 35 CTVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISS-DGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAGA 112 (358)
Q Consensus 35 ~~~v~v~-~~DrpGLl~~i~~~L~~~glnI~~A~I~t-~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~~~ 112 (358)
.+.|++. .++.||..++|...|+.+|+||.--.... .+|..--+|.|...+- +...+.++ .+...+.....
T Consensus 270 ~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~~~-----~~a~~~l~-~~~~el~~~~~- 342 (600)
T 3l76_A 270 QAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLL-----NTAEAVTS-AIAPALRSYPE- 342 (600)
T ss_dssp CEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGGGH-----HHHHHHHH-HHGGGGSSSTT-
T ss_pred EEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHHHH-----HHHHHHHH-HHHHHhhcccc-
Confidence 3455555 47999999999999999999995333222 4565555677743211 11222222 23322210000
Q ss_pred ccCCceeeeecCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHHH
Q 018281 113 KTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRL 189 (358)
Q Consensus 113 r~~~~~~v~~~~~~~~t~v~V~~~---DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~~ 189 (358)
......| ....+...|.|.|. .+||+.+++..+|.+.|+||.... |- ...-.|.|.. +..
T Consensus 343 -~~~~~~v--~~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS--e~~Is~vI~~----------~d~ 405 (600)
T 3l76_A 343 -ADQEAEI--IVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS--EVKVSCVIDQ----------RDA 405 (600)
T ss_dssp -CSSSSEE--EEECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEG----------GGH
T ss_pred -ccCccee--EecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC--CCEEEEEEcH----------HHH
Confidence 0001112 23347788999976 799999999999999999997654 22 2234455544 222
Q ss_pred HHHHHHHHHHHcCCCCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCcee
Q 018281 190 SLMEEQLKNILRGCDDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYS 269 (358)
Q Consensus 190 ~~L~~~L~~~L~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t 269 (358)
++..+.|++.+..... +. . .+. ... ....-+-|..+. +.+
T Consensus 406 ~~Av~aLh~~f~~~~t-------~~-~--------~~~-------~~~-------------~~~~v~Gia~~~----~~a 445 (600)
T 3l76_A 406 DRAIAALSNAFGVTLS-------PP-K--------NQT-------DTS-------------HLPAVRGVALDQ----DQA 445 (600)
T ss_dssp HHHHHHHHHHTTCCBC-------CC-C--------CCC-------C----------------CCSCCEEEEEC----SEE
T ss_pred HHHHHHHHHhhcccCC-------Cc-c--------ccc-------ccc-------------ccCceEEEEeeC----CEE
Confidence 3444556665532211 00 0 000 000 011223455554 445
Q ss_pred EEEEE-eCCcchhHHHHHHHhhcCCeEEEEEEEEe
Q 018281 270 VVNVK-CRDRAKLMFDIVCTLTDMQYVVFHAAISS 303 (358)
Q Consensus 270 ~l~v~-~~DrpGLL~~I~~~l~~~~v~I~~a~i~T 303 (358)
.|.|. .+|+||+.++|-..|++.||+|....-+.
T Consensus 446 ~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~ 480 (600)
T 3l76_A 446 QIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQ 480 (600)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred EEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecc
Confidence 66664 59999999999999999999998776554
No 29
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.15 E-value=0.0025 Score=54.10 Aligned_cols=109 Identities=14% Similarity=0.207 Sum_probs=73.6
Q ss_pred CCeEEEEEEe-cCCcchHHHHHHHHhhCCceEEEEEEEee---CCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCC
Q 018281 33 PECTVVKVDS-VNKPGILLEVVQVLSDLDLIITKAYISSD---GGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHI 108 (358)
Q Consensus 33 ~~~~~v~v~~-~DrpGLl~~i~~~L~~~glnI~~A~I~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~ 108 (358)
.+.+.|+|.+ +|+||.++++..+|++.|+||.--..... .|..--+|.|...+... ..+.++++...+. +
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~~~--a~~~L~~~~~~~~--~-- 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFAQE--ALEALEPVLAEIG--G-- 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGHHH--HHHHHHHHHHHHC--C--
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHHHH--HHHHHHHHHHHhC--C--
Confidence 4678888886 89999999999999999999986544322 34455567775321110 0012222333332 1
Q ss_pred CCCcccCCceeeeecCCCCeEEEEEEeCC---cccHHHHHHHHHHhCCCcEEEE
Q 018281 109 TAGAKTWPSKQVGVHSVGDHTAIELIGRD---RPGLLSEISAVLANLRFNVAAA 159 (358)
Q Consensus 109 ~~~~r~~~~~~v~~~~~~~~t~v~V~~~D---rpGLL~~I~~~L~~~g~nI~~A 159 (358)
. + ....+...+.|.|.+ +||.++++..+|++.|+||...
T Consensus 88 ~----------v--~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 88 E----------A--ILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp E----------E--EEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred c----------E--EEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 1 1 123467789999876 9999999999999999999543
No 30
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.13 E-value=0.0017 Score=55.08 Aligned_cols=63 Identities=16% Similarity=0.263 Sum_probs=50.4
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEe-c-CCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 018281 128 HTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT-H-NRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKN 198 (358)
Q Consensus 128 ~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T-~-~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~ 198 (358)
...+.|.+.|+||+|++|+++|++.|+||.+..+.+ . .+...-+|.+.. +...++.|.++|.+
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~--------d~~~leqI~kqL~K 67 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG--------DEKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES--------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec--------cHHHHHHHHHHHcC
Confidence 357899999999999999999999999999999875 4 356666666654 24567778777775
No 31
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.00 E-value=0.023 Score=47.94 Aligned_cols=137 Identities=18% Similarity=0.155 Sum_probs=84.2
Q ss_pred CCCeEEEEEEe-CCcccHHHHHHHHHHhCCCcEEEEEEEec---CCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHH
Q 018281 125 VGDHTAIELIG-RDRPGLLSEISAVLANLRFNVAAAEVWTH---NRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNIL 200 (358)
Q Consensus 125 ~~~~t~v~V~~-~DrpGLL~~I~~~L~~~g~nI~~A~i~T~---~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L 200 (358)
..+...|+|.+ +|+||.++++.++|++.|+||........ .|...-.|.|... +. ++..+.|.+..
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~-------d~---~~a~~~L~~~~ 82 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD-------FA---QEALEALEPVL 82 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG-------GH---HHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH-------HH---HHHHHHHHHHH
Confidence 45677788876 89999999999999999999986443321 2344455666541 11 22223333211
Q ss_pred cCCCCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeCC---
Q 018281 201 RGCDDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCRD--- 277 (358)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~D--- 277 (358)
. .+ . . .|.+++ +.+.+.|.+.+
T Consensus 83 -~-----------------------~~-----------------------~--~--~v~~~~----~~a~vsvVG~gm~~ 107 (167)
T 2dt9_A 83 -A-----------------------EI-----------------------G--G--EAILRP----DIAKVSIVGVGLAS 107 (167)
T ss_dssp -H-----------------------HH-----------------------C--C--EEEEEC----SEEEEEEEESSGGG
T ss_pred -H-----------------------Hh-----------------------C--C--cEEEeC----CEEEEEEECCCccc
Confidence 0 00 0 0 233322 56788898876
Q ss_pred cchhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcCCCHHHHHHHHHHHHHHH
Q 018281 278 RAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAI 339 (358)
Q Consensus 278 rpGLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l 339 (358)
+||+++++.++|.+.|+||.... |- +. .=.|.|.. +..++.-++|..++
T Consensus 108 ~~Gv~a~~f~aL~~~~InI~~is--~S-e~-~is~vv~~---------~d~~~Av~~Lh~~f 156 (167)
T 2dt9_A 108 TPEVPAKMFQAVASTGANIEMIA--TS-EV-RISVIIPA---------EYAEAALRAVHQAF 156 (167)
T ss_dssp STHHHHHHHHHHHHTTCCCCEEE--EC-SS-EEEEEEEG---------GGHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHCCCCEEEEE--cc-CC-EEEEEEeH---------HHHHHHHHHHHHHH
Confidence 99999999999999999996653 32 32 44455543 23444445555444
No 32
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.99 E-value=0.0024 Score=54.25 Aligned_cols=64 Identities=17% Similarity=0.282 Sum_probs=51.2
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEe-c-CCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHH
Q 018281 128 HTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT-H-NRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNI 199 (358)
Q Consensus 128 ~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T-~-~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~ 199 (358)
...+.|...|+||+|++|+++|++.|+||.+..+.. . .+...-+|.+.. +...++.|.++|.+.
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~Kl 69 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcCC
Confidence 468899999999999999999999999999999875 4 466666777765 235667777777753
No 33
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.90 E-value=0.0029 Score=53.73 Aligned_cols=63 Identities=11% Similarity=0.148 Sum_probs=48.1
Q ss_pred EEEEEeCCcchhHHHHHHHhhcCCeEEEEEEEEecC--CceEEEEEEEeCCCCcCCCHHHHHHHHHHHHHHH
Q 018281 270 VVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDG--PHASQEYYIRHMDGCILDTEGEKERVIKCLEAAI 339 (358)
Q Consensus 270 ~l~v~~~DrpGLL~~I~~~l~~~~v~I~~a~i~T~g--~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l 339 (358)
.|.|.+.||||+|++|+.+|++.|+||.+..+.+.. +...=+|-+. |. +..+++|.+.|.+..
T Consensus 5 ~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~---~d----~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 5 ILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV---GD----EKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE---SC----HHHHHHHHHHHHHST
T ss_pred EEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe---cc----HHHHHHHHHHHcCCC
Confidence 599999999999999999999999999999997543 3344455554 21 467788887777443
No 34
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.77 E-value=0.011 Score=50.99 Aligned_cols=138 Identities=20% Similarity=0.254 Sum_probs=85.5
Q ss_pred CCeEEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEe-e--CCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCC
Q 018281 33 PECTVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISS-D--GGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHI 108 (358)
Q Consensus 33 ~~~~~v~v~-~~DrpGLl~~i~~~L~~~glnI~~A~I~t-~--~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~ 108 (358)
.+.+.|+|. .+|+||.+++|...|+..|+||.--.... . +|..--+|+|...+... ..+.++.+...|. .
T Consensus 14 ~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~~~--a~~~L~~~~~el~----~ 87 (181)
T 3s1t_A 14 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPA--AVEKLDSLRNEIG----F 87 (181)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTHHH--HHHHHHHTHHHHC----C
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHHHH--HHHHHHHHHHhcC----c
Confidence 356677765 69999999999999999999997554432 2 56655668775321110 0112222222231 1
Q ss_pred CCCcccCCceeeeecCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCC
Q 018281 109 TAGAKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGD 185 (358)
Q Consensus 109 ~~~~r~~~~~~v~~~~~~~~t~v~V~~~---DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~ 185 (358)
..+ ....+...|.|.|. ++||+.+++..+|.+.|+||.... |- ...-.|.|..
T Consensus 88 ---------~~v--~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is--tS--ei~Is~vV~~--------- 143 (181)
T 3s1t_A 88 ---------SQL--LYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TS--EIRISVLCRD--------- 143 (181)
T ss_dssp ---------SEE--EEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EE--TTEEEEEEEG---------
T ss_pred ---------ceE--EEeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE--cC--CCEEEEEEeH---------
Confidence 011 12246678888866 899999999999999999998765 21 2233455544
Q ss_pred hHHHHHHHHHHHHHHc
Q 018281 186 QTRLSLMEEQLKNILR 201 (358)
Q Consensus 186 ~~~~~~L~~~L~~~L~ 201 (358)
+..++.-+.|++.+.
T Consensus 144 -~d~~~Av~aLH~~f~ 158 (181)
T 3s1t_A 144 -TELDKAVVALHEAFG 158 (181)
T ss_dssp -GGHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHc
Confidence 222344456666663
No 35
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.73 E-value=0.0041 Score=52.61 Aligned_cols=58 Identities=16% Similarity=0.108 Sum_probs=43.2
Q ss_pred EEEEEeCCcchhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcCCCHHHHHHHHHHHH
Q 018281 270 VVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLE 336 (358)
Q Consensus 270 ~l~v~~~DrpGLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~ 336 (358)
.|+|.|.||+|||.+|+++|.+.++||..+.+.+.|. +|+... ..+......|...+.
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~-----i~~~~~----~~~~~~~~~L~~~l~ 59 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR-----IYLNFA----ELEFESFSSLMAEIR 59 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE-----EEEEEC----CCCHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE-----EEEEEE----eCCHHHHHHHHHHHH
Confidence 3889999999999999999999999999999987643 555433 122345555555544
No 36
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.58 E-value=0.1 Score=45.15 Aligned_cols=111 Identities=21% Similarity=0.200 Sum_probs=72.5
Q ss_pred eEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEE-ee-CCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCCc
Q 018281 35 CTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYIS-SD-GGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAGA 112 (358)
Q Consensus 35 ~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~-t~-~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~~~ 112 (358)
...|.|...|+||.|++|+++|+..|+||.+-.+. |. .|..--++.|... +..++.|.+.|......-.-.
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-------e~~ieqL~kQL~KLidVikV~ 101 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-------DKTIEQIEKQAYKLVEVVKVT 101 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-------TTHHHHHHHHHTTSTTEEEEE
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-------HHHHHHHHHHhcCcCceEEEE
Confidence 46899999999999999999999999999998886 53 4666656666532 246788888887543221000
Q ss_pred ccCC--ceeeeecCCCCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEE
Q 018281 113 KTWP--SKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAA 159 (358)
Q Consensus 113 r~~~--~~~v~~~~~~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A 159 (358)
.... ...| ......+.|.+... -..|.++....+.+|++.
T Consensus 102 dl~~~~~~~v----~REl~LiKV~~~~~---r~ei~~i~~~fra~ivDv 143 (193)
T 2fgc_A 102 PIDPLPENRV----EREMALIKVRFDED---KQEIFQLVEIFRGKIIDV 143 (193)
T ss_dssp ECCSSGGGEE----EEEEEEEEEECSSC---HHHHHHHHHHTTCEEEEE
T ss_pred EecCCCCccc----eeEEEEEEEeCCcC---HHHHHHHHHHcCCEEEEE
Confidence 0001 1111 11334566665432 677777777778777764
No 37
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.54 E-value=0.0077 Score=51.09 Aligned_cols=111 Identities=12% Similarity=0.053 Sum_probs=69.0
Q ss_pred EEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEe-e-CCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCCcc
Q 018281 36 TVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS-D-GGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAGAK 113 (358)
Q Consensus 36 ~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t-~-~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~~~r 113 (358)
..|.|...|+||+|++|+++|+..|+||.+..+.. . .|..--+|.|.. . +..++.|.+.|......-.-.+
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~---d----~~~leql~kQL~Kl~dV~~V~~ 77 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG---P----DEIVEQITKQLNKLIEVVKLID 77 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE---C----HHHHHHHHHHHHHSTTEEEEEE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec---c----HHHHHHHHHHhcCCCCEEEEEE
Confidence 57899999999999999999999999999999974 4 577766666742 1 3566777777764322110011
Q ss_pred cCCceeeeecCCCCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEE
Q 018281 114 TWPSKQVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAA 159 (358)
Q Consensus 114 ~~~~~~v~~~~~~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A 159 (358)
......| ......+.|.+.. .--..|.+.....+.+|++.
T Consensus 78 ~~~~~~v----~rEl~liKv~~~~--~~r~~i~~~~~~fra~ivdv 117 (165)
T 2pc6_A 78 LSSEGYV----ERELMLVKVRAVG--KDREEMKRLADIFRGNIIDV 117 (165)
T ss_dssp GGGSCEE----EEEEEEEEEECCT--HHHHHHHHHHHHTTCEEEEE
T ss_pred cCCccee----eeEEEEEEEeCCc--ccHHHHHHHHHHcCCEEEEE
Confidence 1111111 1123345555532 23355666666777777754
No 38
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.43 E-value=0.011 Score=51.19 Aligned_cols=63 Identities=17% Similarity=0.380 Sum_probs=48.4
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEE-ecC-CeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 018281 128 HTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVW-THN-RRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKN 198 (358)
Q Consensus 128 ~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~-T~~-~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~ 198 (358)
...++|...|+||.|++|+++|+..|+||.+..+. |.+ +...-++.+..+ ...++.|.++|.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--------e~~ieqL~kQL~K 93 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--------DKTIEQIEKQAYK 93 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--------TTHHHHHHHHHTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--------HHHHHHHHHHhcC
Confidence 56899999999999999999999999999998886 444 556666777651 1345666666654
No 39
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.37 E-value=0.15 Score=43.71 Aligned_cols=139 Identities=10% Similarity=0.124 Sum_probs=84.8
Q ss_pred CCeEEEEEE-eCCcccHHHHHHHHHHhCCCcEEEEEEEe-c--CCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHc
Q 018281 126 GDHTAIELI-GRDRPGLLSEISAVLANLRFNVAAAEVWT-H--NRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILR 201 (358)
Q Consensus 126 ~~~t~v~V~-~~DrpGLL~~I~~~L~~~g~nI~~A~i~T-~--~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L~ 201 (358)
.+.+.|+|. .+|+||.+++|..+|+++|+||..-.... . .|...-.|.+... +.+ ...+.|.+..
T Consensus 14 ~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~-------~~~---~a~~~L~~~~- 82 (181)
T 3s1t_A 14 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD-------VGP---AAVEKLDSLR- 82 (181)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETT-------THH---HHHHHHHHTH-
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehh-------HHH---HHHHHHHHHH-
Confidence 355556554 67999999999999999999997544332 2 4555566777551 112 2222222210
Q ss_pred CCCCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeC---Cc
Q 018281 202 GCDDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCR---DR 278 (358)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~---Dr 278 (358)
. .+ . ...|.+++ +...+.|.+. ++
T Consensus 83 ~-----------------------el--------~------------------~~~v~~~~----~va~VsvVG~gm~~~ 109 (181)
T 3s1t_A 83 N-----------------------EI--------G------------------FSQLLYDD----HIGKVSLIGAGMRSH 109 (181)
T ss_dssp H-----------------------HH--------C------------------CSEEEEES----CEEEEEEEEECCTTC
T ss_pred H-----------------------hc--------C------------------cceEEEeC----CEEEEEEEecccccC
Confidence 0 00 0 01233332 5567887765 89
Q ss_pred chhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcCCCHHHHHHHHHHHHHHHhh
Q 018281 279 AKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR 341 (358)
Q Consensus 279 pGLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~~ 341 (358)
||+.+++.++|++.||||.+.. |- ...=.|.|.. +..++.-++|..++..
T Consensus 110 ~Gvaa~~f~aLa~~~InI~~Is--tS--ei~Is~vV~~---------~d~~~Av~aLH~~f~l 159 (181)
T 3s1t_A 110 PGVTATFCEALAAVGVNIELIS--TS--EIRISVLCRD---------TELDKAVVALHEAFGL 159 (181)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEE--EE--TTEEEEEEEG---------GGHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHCCCcEEEEE--cC--CCEEEEEEeH---------HHHHHHHHHHHHHHcC
Confidence 9999999999999999999877 22 2223355543 3444555666666643
No 40
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=96.23 E-value=0.077 Score=51.66 Aligned_cols=109 Identities=21% Similarity=0.285 Sum_probs=73.9
Q ss_pred CeEEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEee---CCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCC
Q 018281 34 ECTVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISSD---GGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHIT 109 (358)
Q Consensus 34 ~~~~v~v~-~~DrpGLl~~i~~~L~~~glnI~~A~I~t~---~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~ 109 (358)
+.+.|+|. .+|+||.+++|...|++.|+||.--.+.|. +|...-+|.|... . .+...+.|++ +...+...
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~--~---~~~a~~~l~~-~~~~~~~~ 336 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS--D---GRRAMEILKK-LQVQGNWT 336 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT--T---HHHHHHHHHH-HHTTTTCS
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech--h---HHHHHHHHHH-HHHHcCCc
Confidence 44566777 699999999999999999999986655443 4545556777531 1 1123334443 33333211
Q ss_pred CCcccCCceeeeecCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCCcEEEE
Q 018281 110 AGAKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAA 159 (358)
Q Consensus 110 ~~~r~~~~~~v~~~~~~~~t~v~V~~~---DrpGLL~~I~~~L~~~g~nI~~A 159 (358)
.+ ....+...+.|.+. ++||.++++..+|.+.|+||...
T Consensus 337 ---------~v--~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 337 ---------NV--LYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp ---------EE--EEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred ---------eE--EEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 11 12346778888875 79999999999999999999843
No 41
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.06 E-value=0.032 Score=46.91 Aligned_cols=59 Identities=20% Similarity=0.281 Sum_probs=45.0
Q ss_pred EEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 018281 130 AIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKN 198 (358)
Q Consensus 130 ~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~ 198 (358)
.|.|.|.||+|+|++|+.+|..+++||....+.+. |. +++.-+ ..+.+.+..|...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~-g~----i~~~~~-----~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI-GR----IYLNFA-----ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT-TE----EEEEEC-----CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC-CE----EEEEEE-----eCCHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999766 33 445442 1134556667766664
No 42
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.89 E-value=0.018 Score=50.73 Aligned_cols=47 Identities=19% Similarity=0.183 Sum_probs=35.6
Q ss_pred eEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEe-e----CCEEEEEEEE
Q 018281 35 CTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISS-D----GGWFMDVFHV 81 (358)
Q Consensus 35 ~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t-~----~g~~~d~f~V 81 (358)
...|.|.+.||||+|++|+.+|++++.||...+..+ . ++.+.-.+-+
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV 55 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEI 55 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEE
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEE
Confidence 457899999999999999999999999999999988 3 5666544444
No 43
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.57 E-value=0.58 Score=45.37 Aligned_cols=138 Identities=13% Similarity=0.179 Sum_probs=85.2
Q ss_pred CeEEEEEE-eCCcccHHHHHHHHHHhCCCcEEEEEEEec---CCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHcC
Q 018281 127 DHTAIELI-GRDRPGLLSEISAVLANLRFNVAAAEVWTH---NRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILRG 202 (358)
Q Consensus 127 ~~t~v~V~-~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~---~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L~~ 202 (358)
+.+.|+|. .+|+||.+++|.+.|+++|+||......|. .|...-.|.|... +.++ ..+.|.+ +..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~-------~~~~---a~~~l~~-~~~ 331 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS-------DGRR---AMEILKK-LQV 331 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT-------THHH---HHHHHHH-HHT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech-------hHHH---HHHHHHH-HHH
Confidence 45567777 589999999999999999999986655442 3434445666441 1222 2233332 211
Q ss_pred CCCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEe---CCcc
Q 018281 203 CDDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKC---RDRA 279 (358)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~---~Drp 279 (358)
+.. ...|.+++ +...+.|.+ .++|
T Consensus 332 ~~~-------------------------------------------------~~~v~~~~----~~a~vsvVG~gm~~~~ 358 (421)
T 3ab4_A 332 QGN-------------------------------------------------WTNVLYDD----QVGKVSLVGAGMKSHP 358 (421)
T ss_dssp TTT-------------------------------------------------CSEEEEEC----CEEEEEEECGGGTSCT
T ss_pred HcC-------------------------------------------------CceEEEeC----CeEEEEEEccCcccCc
Confidence 111 01233322 566788887 4899
Q ss_pred hhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcCCCHHHHHHHHHHHHHHHhh
Q 018281 280 KLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRR 341 (358)
Q Consensus 280 GLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~~ 341 (358)
|++.++.++|.+.||||.... |- ...=.|.|.. +..++.-++|..++-.
T Consensus 359 Gv~a~~f~aL~~~~InI~~is--~S--e~~is~vV~~---------~d~~~Av~~Lh~~f~~ 407 (421)
T 3ab4_A 359 GVTAEFMEALRDVNVNIELIS--TS--EIRISVLIRE---------DDLDAAARALHEQFQL 407 (421)
T ss_dssp THHHHHHHHHHHTTCCCCEEE--EE--TTEEEEEEEG---------GGHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHCCCCEEEEE--cC--CCeEEEEEeH---------HHHHHHHHHHHHHHhc
Confidence 999999999999999999554 32 2223354543 3445555666666643
No 44
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.54 E-value=0.084 Score=46.08 Aligned_cols=145 Identities=11% Similarity=0.116 Sum_probs=83.6
Q ss_pred CCCCeEEEEEE-eCCcccHHHHHHHHHHhCCCcEEEEEEEe---cCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHH
Q 018281 124 SVGDHTAIELI-GRDRPGLLSEISAVLANLRFNVAAAEVWT---HNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNI 199 (358)
Q Consensus 124 ~~~~~t~v~V~-~~DrpGLL~~I~~~L~~~g~nI~~A~i~T---~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~ 199 (358)
...+...|+|. .+|+||+.++|..+|++.|+||..--... .++.....|.+... ..+.....|.+.
T Consensus 31 ~~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~----------d~~~~~~~l~~~ 100 (200)
T 4go7_X 31 HDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD----------VGPAAVEKLDSL 100 (200)
T ss_dssp EECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG----------GHHHHHHHHHTT
T ss_pred ccCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh----------hHHHHHHHHHHH
Confidence 34466677776 58999999999999999999998643322 23344445666541 112222222211
Q ss_pred HcCCCCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEE---eC
Q 018281 200 LRGCDDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVK---CR 276 (358)
Q Consensus 200 L~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~---~~ 276 (358)
.. .+ . ...|.+++ +...+.|. -+
T Consensus 101 ~~------------------------~~-------~-------------------~~~v~~~~----~iakVSvVG~GM~ 126 (200)
T 4go7_X 101 RN------------------------EI-------G-------------------FSQLLYDD----HIGKVSLIGAGMR 126 (200)
T ss_dssp HH------------------------HH-------C-------------------CSEEEEEC----CEEEEEEEEESCT
T ss_pred Hh------------------------hh-------c-------------------eeeEEEec----Ceeeeeeeccccc
Confidence 00 00 0 01233332 34455555 48
Q ss_pred CcchhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcCCCHHHHHHHHHHHHHHHhhccCC
Q 018281 277 DRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRRRVSE 345 (358)
Q Consensus 277 DrpGLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~~~~~~ 345 (358)
.+||+..++-++|++.||||.... | .+ ..=.|.|.. ++.++--++|..+..-..++
T Consensus 127 ~~~GVaak~F~aLa~~~INI~mIs--t-SE-i~IS~vV~~---------~d~~~Av~aLH~~F~L~~~~ 182 (200)
T 4go7_X 127 SHPGVTATFCEALAAVGVNIELIS--T-SE-IRISVLCRD---------TELDKAVVALHEAFGLGGDE 182 (200)
T ss_dssp TCHHHHHHHHHHHHHTTCCCCEEE--E-CS-SEEEEEEEG---------GGHHHHHHHHHHHHTC----
T ss_pred cCCCcHHHHHHHHHHCCCCEEEEE--c-cC-CEEEEEEeH---------HHHHHHHHHHHHHhCCCCCc
Confidence 899999999999999999999885 2 22 222344532 34444456777776544444
No 45
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.52 E-value=0.019 Score=50.27 Aligned_cols=111 Identities=17% Similarity=0.146 Sum_probs=71.0
Q ss_pred CCeEEEEEE-ecCCcchHHHHHHHHhhCCceEEEEEEEe---eCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCC
Q 018281 33 PECTVVKVD-SVNKPGILLEVVQVLSDLDLIITKAYISS---DGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHI 108 (358)
Q Consensus 33 ~~~~~v~v~-~~DrpGLl~~i~~~L~~~glnI~~A~I~t---~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~ 108 (358)
.+...|+|. .+|+||..++|.+.|++.|+||---.... .++.....|.+... ..+.....|.....
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~---------d~~~~~~~l~~~~~- 102 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD---------VGPAAVEKLDSLRN- 102 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG---------GHHHHHHHHHTTHH-
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh---------hHHHHHHHHHHHHh-
Confidence 467788887 59999999999999999999998544432 24555556777532 11222222221110
Q ss_pred CCCcccCCceeeeecCCCCeEEEEEE---eCCcccHHHHHHHHHHhCCCcEEEEE
Q 018281 109 TAGAKTWPSKQVGVHSVGDHTAIELI---GRDRPGLLSEISAVLANLRFNVAAAE 160 (358)
Q Consensus 109 ~~~~r~~~~~~v~~~~~~~~t~v~V~---~~DrpGLL~~I~~~L~~~g~nI~~A~ 160 (358)
. ... ..+ ....+...|.|. .+.+||+.+++..+|++.|+||..-.
T Consensus 103 ~----~~~-~~v--~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 103 E----IGF-SQL--LYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp H----HCC-SEE--EEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred h----hce-eeE--EEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 0 000 011 122345566666 45799999999999999999998654
No 46
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.52 E-value=0.021 Score=50.30 Aligned_cols=37 Identities=16% Similarity=0.371 Sum_probs=30.6
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEec
Q 018281 128 HTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTH 164 (358)
Q Consensus 128 ~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~ 164 (358)
...+.|.+.||||+|++|+++|+++++||...+..+.
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~ 40 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLI 40 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEEC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEcc
Confidence 4678999999999999999999999999999999884
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=95.36 E-value=0.088 Score=52.06 Aligned_cols=113 Identities=13% Similarity=0.190 Sum_probs=72.5
Q ss_pred CeEEEEEEe---cCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCC
Q 018281 34 ECTVVKVDS---VNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITA 110 (358)
Q Consensus 34 ~~~~v~v~~---~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~ 110 (358)
+...|+|.+ .++||..+++..+|+..|+||.--...+... --+|.|...+ .++..+.|++.+.+....
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~--~Is~~V~~~d-----~~~a~~~L~~~l~~~~~~-- 387 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSET--NISLVVSEED-----VDKALKALKREFGDFGKK-- 387 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTC--CEEEEEEGGG-----HHHHHHHHHHHHCC------
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCC--EEEEEEechH-----HHHHHHHHHHHHhhhccc--
Confidence 556778885 6788999999999999999998666534222 2347775322 124667777766111000
Q ss_pred CcccCC-ceeeeecCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCCcEE
Q 018281 111 GAKTWP-SKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVA 157 (358)
Q Consensus 111 ~~r~~~-~~~v~~~~~~~~t~v~V~~~---DrpGLL~~I~~~L~~~g~nI~ 157 (358)
.+.... -..+ ....+...|.|.|. ++||.++++..+|.+.|+||.
T Consensus 388 ~~~~~~~~~~v--~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~ 436 (473)
T 3c1m_A 388 SFLNNNLIRDV--SVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIK 436 (473)
T ss_dssp CTTSCCCEEEE--EEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCC
T ss_pred ccccccccceE--EEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEE
Confidence 000000 0011 12346667888876 589999999999999999994
No 48
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=93.61 E-value=1.7 Score=42.70 Aligned_cols=117 Identities=13% Similarity=0.146 Sum_probs=72.1
Q ss_pred CCeEEEEEEe---CCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHcC
Q 018281 126 GDHTAIELIG---RDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILRG 202 (358)
Q Consensus 126 ~~~t~v~V~~---~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L~~ 202 (358)
.+...|+|.+ .++||+++++..+|+++|+||......|. ...-.|.|... ..++..+.|++.+-.
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~ts--e~~Is~~V~~~----------d~~~a~~~L~~~l~~ 383 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSS--ETNISLVVSEE----------DVDKALKALKREFGD 383 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCT--TCCEEEEEEGG----------GHHHHHHHHHHHHCC
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCC--CCEEEEEEech----------HHHHHHHHHHHHHhh
Confidence 3566788886 68899999999999999999986655332 23345666541 112333444443310
Q ss_pred CCCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeC---Ccc
Q 018281 203 CDDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCR---DRA 279 (358)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~---Drp 279 (358)
.. ++ .++. ... -..|.+++ +...+.|.+. ++|
T Consensus 384 -~~-------------------~~---------~~~~-----------~~~-~~~v~~~~----~~a~vsvVG~gm~~~~ 418 (473)
T 3c1m_A 384 -FG-------------------KK---------SFLN-----------NNL-IRDVSVDK----DVCVISVVGAGMRGAK 418 (473)
T ss_dssp ---------------------------------CTTS-----------CCC-EEEEEEEE----EEEEEEEECTTTTTCT
T ss_pred -hc-------------------cc---------cccc-----------ccc-cceEEEeC----CcEEEEEEecCCCCCh
Confidence 00 00 0000 000 01344433 5667888874 699
Q ss_pred hhHHHHHHHhhcCCeEEEEE
Q 018281 280 KLMFDIVCTLTDMQYVVFHA 299 (358)
Q Consensus 280 GLL~~I~~~l~~~~v~I~~a 299 (358)
|.+.++.++|.+.||||...
T Consensus 419 Gvaak~f~aL~~~~InI~mi 438 (473)
T 3c1m_A 419 GIAGKIFTAVSESGANIKMI 438 (473)
T ss_dssp THHHHHHHHHHHHTCCCCEE
T ss_pred hHHHHHHHHHHHCCCCEEEE
Confidence 99999999999999999544
No 49
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=92.81 E-value=0.35 Score=44.39 Aligned_cols=54 Identities=7% Similarity=0.017 Sum_probs=43.2
Q ss_pred ceeEEEEEeCCcchhHHHHHHHhhcCCeEEEEEEEEecCC-ceEEEEEEEeCCCCc
Q 018281 267 GYSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGP-HASQEYYIRHMDGCI 321 (358)
Q Consensus 267 ~~t~l~v~~~DrpGLL~~I~~~l~~~~v~I~~a~i~T~g~-~a~d~F~v~~~~g~~ 321 (358)
..|.|-+..+|+||-||++-..|+.+|||+.+..-.-.+. .-+=.|||- -+|+.
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD-~eg~~ 253 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYAD-FIGHR 253 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEE-EESCT
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEE-EecCC
Confidence 4566777778999999999999999999999999875444 466677774 56765
No 50
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=91.34 E-value=0.48 Score=44.10 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=42.8
Q ss_pred ceeEEEEEeC-CcchhHHHHHHHhhcCCeEEEEEEEEecC-CceEEEEEEEeCCCCc
Q 018281 267 GYSVVNVKCR-DRAKLMFDIVCTLTDMQYVVFHAAISSDG-PHASQEYYIRHMDGCI 321 (358)
Q Consensus 267 ~~t~l~v~~~-DrpGLL~~I~~~l~~~~v~I~~a~i~T~g-~~a~d~F~v~~~~g~~ 321 (358)
..|-|-+..+ |+||-||++-..|+.+|||+.+..-.-.+ ..-+=.|||- .+|+.
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD-~eg~~ 255 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSID-ADGHA 255 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEE-EESCT
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEE-EeCCC
Confidence 5677777885 99999999999999999999999887444 4455677774 56765
No 51
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=91.11 E-value=1.1 Score=42.11 Aligned_cols=52 Identities=6% Similarity=0.031 Sum_probs=39.3
Q ss_pred eEEEEEeC--CcchhHHHHHHHhhcCCeEEEEEEEEecCCc-eEEEEEEEeCCCCc
Q 018281 269 SVVNVKCR--DRAKLMFDIVCTLTDMQYVVFHAAISSDGPH-ASQEYYIRHMDGCI 321 (358)
Q Consensus 269 t~l~v~~~--DrpGLL~~I~~~l~~~~v~I~~a~i~T~g~~-a~d~F~v~~~~g~~ 321 (358)
|.+-+..+ |+||-||++-..|+.+|||+.+..-.-.+.+ -+=.||| |-+|+.
T Consensus 207 ts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~ 261 (329)
T 3luy_A 207 ESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV-TLDAAP 261 (329)
T ss_dssp EEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE-EESSCT
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE-EEeCCc
Confidence 33444444 7999999999999999999999998755555 4456666 567765
No 52
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=91.09 E-value=0.77 Score=45.89 Aligned_cols=52 Identities=21% Similarity=0.307 Sum_probs=42.7
Q ss_pred CCCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEe--cCCeeEEEEEEEe
Q 018281 125 VGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT--HNRRIACVLYVND 176 (358)
Q Consensus 125 ~~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T--~~~~~~d~F~v~~ 176 (358)
.+.+..+.+.-+|+||.+..|+..|.++|+||.+.++.. .++.+.-.+.+..
T Consensus 451 ~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~ 504 (529)
T 1ygy_A 451 RAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQ 504 (529)
T ss_dssp ESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESS
T ss_pred cCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECC
Confidence 445678888999999999999999999999999999986 4566665555544
No 53
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=90.76 E-value=0.59 Score=45.11 Aligned_cols=50 Identities=22% Similarity=0.318 Sum_probs=44.2
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEe
Q 018281 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVND 176 (358)
Q Consensus 127 ~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~ 176 (358)
+...+.+.-.|+||.+..|+.+|.++|+||......+.++.+.-++.+..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcCC
Confidence 45678899999999999999999999999999999998888877776655
No 54
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=90.60 E-value=0.74 Score=41.85 Aligned_cols=51 Identities=6% Similarity=0.057 Sum_probs=41.6
Q ss_pred ceeEEEEEe---CCcchhHHHHHHHhhcCCeEEEEEEEEecC-CceEEEEEEEeC
Q 018281 267 GYSVVNVKC---RDRAKLMFDIVCTLTDMQYVVFHAAISSDG-PHASQEYYIRHM 317 (358)
Q Consensus 267 ~~t~l~v~~---~DrpGLL~~I~~~l~~~~v~I~~a~i~T~g-~~a~d~F~v~~~ 317 (358)
..|.|-+.. +|+||-||++-..|+.+|||+.+..-.-.+ ..-+=.|||-..
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e 239 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD 239 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe
Confidence 456677777 899999999999999999999999987544 456678888543
No 55
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=90.32 E-value=0.83 Score=44.09 Aligned_cols=49 Identities=14% Similarity=0.231 Sum_probs=42.3
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEE
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVI 82 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~ 82 (358)
+...+.+.-.|+||.+.+|+.+|.++|+||......+.++.++-++-+.
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD 378 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIE 378 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcC
Confidence 4567889999999999999999999999999999999888877555553
No 56
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=90.05 E-value=0.53 Score=46.11 Aligned_cols=106 Identities=14% Similarity=0.195 Sum_probs=67.5
Q ss_pred eEEEEEEe---cCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCCC
Q 018281 35 CTVVKVDS---VNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITAG 111 (358)
Q Consensus 35 ~~~v~v~~---~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~~ 111 (358)
.+.|+|.+ ++.||..++|..+|+.+|+||.-- .+... --+|.|...+-.. ......+.++..+. ..
T Consensus 298 ~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~~~~--~is~~V~~~d~~~-~~~~~~~el~~~~~----~~-- 366 (446)
T 3tvi_A 298 FTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PSGVD--SVSLVIEDCKLDG-KCDKIIEEIKKQCN----PD-- 366 (446)
T ss_dssp EEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CEETT--EEEEEEEHHHHTT-THHHHHHHHHHHSC----CS--
T ss_pred EEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ecCCC--EEEEEEecchHHH-HHHHHHHHHHHhcC----CC--
Confidence 45567774 689999999999999999999732 22222 2347775332111 00122333333322 10
Q ss_pred cccCCceeeeecCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCCcEEEEE
Q 018281 112 AKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAE 160 (358)
Q Consensus 112 ~r~~~~~~v~~~~~~~~t~v~V~~~---DrpGLL~~I~~~L~~~g~nI~~A~ 160 (358)
.| ....+...|.|.|. .+||+.+++..+|.+.|+||....
T Consensus 367 -------~v--~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 367 -------SI--EIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp -------EE--EEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred -------cE--EEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 11 12236678898876 589999999999999999998543
No 57
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=89.72 E-value=0.99 Score=45.09 Aligned_cols=49 Identities=20% Similarity=0.124 Sum_probs=39.8
Q ss_pred CceeEEEEEeCCcchhHHHHHHHhhcCCeEEEEEEEEec--CCceEEEEEE
Q 018281 266 KGYSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSD--GPHASQEYYI 314 (358)
Q Consensus 266 ~~~t~l~v~~~DrpGLL~~I~~~l~~~~v~I~~a~i~T~--g~~a~d~F~v 314 (358)
..+..|-+.-+|+||.+..|+..|.++||||..+++.-. |+.+.=.+.+
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v 502 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL 502 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE
Confidence 355668899999999999999999999999999999754 4455544444
No 58
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=87.53 E-value=2.5 Score=41.29 Aligned_cols=107 Identities=12% Similarity=0.135 Sum_probs=68.2
Q ss_pred CeEEEEEEe---CCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHcCC
Q 018281 127 DHTAIELIG---RDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILRGC 203 (358)
Q Consensus 127 ~~t~v~V~~---~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L~~~ 203 (358)
+.+.|+|.+ .+.||++++|..+|+++|++|.... + +...-.|.|... + +. .....+.+.|...+.
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~--~--~~~~is~~V~~~-d---~~--~~~~~~~~el~~~~~-- 364 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP--S--GVDSVSLVIEDC-K---LD--GKCDKIIEEIKKQCN-- 364 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC--E--ETTEEEEEEEHH-H---HT--TTHHHHHHHHHHHSC--
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe--c--CCCEEEEEEecc-h---HH--HHHHHHHHHHHHhcC--
Confidence 455678875 6899999999999999999997532 2 122334656541 0 00 011222222322111
Q ss_pred CCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeC---Ccch
Q 018281 204 DDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCR---DRAK 280 (358)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~---DrpG 280 (358)
...|.+++ +...|.|.+. .+||
T Consensus 365 ---------------------------------------------------~~~v~v~~----~vA~VSvVG~gM~~~~G 389 (446)
T 3tvi_A 365 ---------------------------------------------------PDSIEIHP----NMALVATVGTGMAKTKG 389 (446)
T ss_dssp ---------------------------------------------------CSEEEEEE----EEEEEEEECGGGSSCTT
T ss_pred ---------------------------------------------------CCcEEEeC----CeEEEEEECCCccCChh
Confidence 01233332 5567888874 5999
Q ss_pred hHHHHHHHhhcCCeEEEEEE
Q 018281 281 LMFDIVCTLTDMQYVVFHAA 300 (358)
Q Consensus 281 LL~~I~~~l~~~~v~I~~a~ 300 (358)
+..++-++|.+.||||....
T Consensus 390 vaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 390 IANKIFTALSKENVNIRMID 409 (446)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEE
Confidence 99999999999999998865
No 59
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=86.82 E-value=1.9 Score=41.68 Aligned_cols=50 Identities=20% Similarity=0.270 Sum_probs=44.4
Q ss_pred CCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEE
Q 018281 126 GDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVN 175 (358)
Q Consensus 126 ~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~ 175 (358)
.+...|.+.-+|.||.|..|..+|+++|+||..-...|.++.+.-+.-+.
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~~ 390 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEAD 390 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEEC
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEec
Confidence 35689999999999999999999999999999999999998886666554
No 60
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=86.78 E-value=2.7 Score=40.63 Aligned_cols=49 Identities=6% Similarity=0.021 Sum_probs=43.5
Q ss_pred ceeEEEEEeCCcchhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEE
Q 018281 267 GYSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIR 315 (358)
Q Consensus 267 ~~t~l~v~~~DrpGLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~ 315 (358)
..+.|-+.-.++||.|..|+.+|+++|+||......|.|+-+.-+.-|.
T Consensus 342 ~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~~ 390 (416)
T 3k5p_A 342 TGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEAD 390 (416)
T ss_dssp SSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEEC
T ss_pred CceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEec
Confidence 4567888899999999999999999999999999999999987776553
No 61
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=86.63 E-value=11 Score=37.46 Aligned_cols=138 Identities=15% Similarity=0.168 Sum_probs=83.4
Q ss_pred CeEEEEEEe---cCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCCC-ChhHHHHHHHHHCCCCCCC
Q 018281 34 ECTVVKVDS---VNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKIT-DGKTIDYIEKALGPKGHIT 109 (358)
Q Consensus 34 ~~~~v~v~~---~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~-~~~~~~~l~~~L~~~~~~~ 109 (358)
+.+.|+|.+ .++||..++|..+|+.+|+||.-- .|... --+|.|...+..... ..+.++.+...|....
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I--~sse~--sis~~v~~~~~~~~~~~~~~l~~~~~el~~~~--- 412 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV--ATSEV--SISLTLDPSKLWSRELIQQELDHVVEELEKIA--- 412 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE--EEETT--EEEEEECCGGGSSSCCCHHHHHHHHHHHTTTS---
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE--EeCCC--eEEEEEechHhhhhhHHHHHHHHHHHHhCCCC---
Confidence 456677774 678999999999999999999855 23222 223666432211100 1234455555554311
Q ss_pred CCcccCCceeeeecCCCCeEEEEEEeC--CcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChH
Q 018281 110 AGAKTWPSKQVGVHSVGDHTAIELIGR--DRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQT 187 (358)
Q Consensus 110 ~~~r~~~~~~v~~~~~~~~t~v~V~~~--DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~ 187 (358)
.+. ...+...|.|.|. ..||+.+++..+|.+.|+||....- -.....-.|.|.. +
T Consensus 413 ---------~v~--~~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsq--GsSei~Is~vV~~----------~ 469 (510)
T 2cdq_A 413 ---------VVN--LLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQ--GASKVNISFIVNE----------A 469 (510)
T ss_dssp ---------EEE--EEEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEE--CTTCSEEEEEEEH----------H
T ss_pred ---------eEE--EeCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEe--cCCcceEEEEEeH----------H
Confidence 111 1235667888876 7889999999999999999975321 1222334455544 3
Q ss_pred HHHHHHHHHHHHHc
Q 018281 188 RLSLMEEQLKNILR 201 (358)
Q Consensus 188 ~~~~L~~~L~~~L~ 201 (358)
..++.-+.|++.+-
T Consensus 470 d~~~Av~aLH~~f~ 483 (510)
T 2cdq_A 470 EAEGCVQALHKSFF 483 (510)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 33445555666553
No 62
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=85.67 E-value=1.6 Score=42.72 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=28.6
Q ss_pred eEEEEEeCCcchhHHHHHHHhhcCCeEEEEEEE
Q 018281 269 SVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAI 301 (358)
Q Consensus 269 t~l~v~~~DrpGLL~~I~~~l~~~~v~I~~a~i 301 (358)
+-|.+...|+||.|.+|+.+|.++||+|.+..=
T Consensus 360 yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q 392 (444)
T 3mtj_A 360 YYLRLRAFDRPGVLADITRILADSSISIDAMVQ 392 (444)
T ss_dssp EEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eEEEEEecCcccHHHHHHHHHHhcCCceeEEee
Confidence 348999999999999999999999999988653
No 63
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=83.25 E-value=4.8 Score=36.73 Aligned_cols=65 Identities=17% Similarity=0.199 Sum_probs=47.8
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEe-cCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHH
Q 018281 127 DHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKN 198 (358)
Q Consensus 127 ~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T-~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~ 198 (358)
..|.|.+..+|+||-|+++.+.|+.+|+|+..-+..- .++...-.|+|.- .|.. .+ +.+++.|.+
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~--eg~~-~d----~~v~~aL~~ 264 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF--IGHR-ED----QNVHNALEN 264 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE--ESCT-TS----HHHHHHHHH
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE--ecCC-Cc----HHHHHHHHH
Confidence 3566667778999999999999999999999888876 4455677888876 3543 23 235555554
No 64
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=82.74 E-value=1.7 Score=35.84 Aligned_cols=113 Identities=16% Similarity=0.121 Sum_probs=68.2
Q ss_pred CeEEEEEEe---cCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCC
Q 018281 34 ECTVVKVDS---VNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITA 110 (358)
Q Consensus 34 ~~~~v~v~~---~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~ 110 (358)
+...|+|.+ ++.||..+++..+|+..|+||.--. +... --+|+|.+.+ ....+.+.|.. ..
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~--~Isf~v~~~~--------~~~~il~~l~~-~~--- 80 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEV--GVSLTIDNDK--------NLPDIVRALSD-IG--- 80 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSS--EEEEEESCCT--------THHHHHHHHTT-TE---
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCC--EEEEEECChH--------HHHHHHHHHhc-cC---
Confidence 567888874 6889999999999999999995322 3222 2346664221 12333334443 11
Q ss_pred CcccCCceeeeecCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEe
Q 018281 111 GAKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVND 176 (358)
Q Consensus 111 ~~r~~~~~~v~~~~~~~~t~v~V~~~---DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~ 176 (358)
.+ ....+...|.+.|. ++||+.+++..+|. |+||....-.+- ...-.|.|..
T Consensus 81 --------~v--~~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~S--e~~is~vv~~ 135 (157)
T 3mah_A 81 --------DV--TVDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGGS--NYNVSVLVKA 135 (157)
T ss_dssp --------EE--EEEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECSS--SSCEEEEEEG
T ss_pred --------eE--EEeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCCC--CCEEEEEEcH
Confidence 11 12235678888875 68999999999999 888875432221 2234455544
No 65
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=82.20 E-value=6.5 Score=35.58 Aligned_cols=50 Identities=20% Similarity=0.335 Sum_probs=40.9
Q ss_pred CeEEEEEEe---CCcccHHHHHHHHHHhCCCcEEEEEEEe-cCCeeEEEEEEEe
Q 018281 127 DHTAIELIG---RDRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVND 176 (358)
Q Consensus 127 ~~t~v~V~~---~DrpGLL~~I~~~L~~~g~nI~~A~i~T-~~~~~~d~F~v~~ 176 (358)
..|.|.+.. +|+||-|+++.+.|+.+|+|+..-+..- .++...-.|+|.-
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 455666666 8999999999999999999999888876 4455677888877
No 66
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=81.61 E-value=6.6 Score=36.39 Aligned_cols=50 Identities=22% Similarity=0.211 Sum_probs=40.5
Q ss_pred CeEEEEEEeC-CcccHHHHHHHHHHhCCCcEEEEEEEe-cCCeeEEEEEEEe
Q 018281 127 DHTAIELIGR-DRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVND 176 (358)
Q Consensus 127 ~~t~v~V~~~-DrpGLL~~I~~~L~~~g~nI~~A~i~T-~~~~~~d~F~v~~ 176 (358)
..|.|.+..+ |+||.|+++.+.|+.+|+|+...+..- .++...-.|+|.-
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 251 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA 251 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE
Confidence 5677777775 999999999999999999998888775 4444566788866
No 67
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=79.15 E-value=14 Score=34.32 Aligned_cols=52 Identities=13% Similarity=0.157 Sum_probs=39.1
Q ss_pred eEEEEEEeC--CcccHHHHHHHHHHhCCCcEEEEEEEe-cCCeeEEEEEEEeCCCCC
Q 018281 128 HTAIELIGR--DRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVNDDTTCR 181 (358)
Q Consensus 128 ~t~v~V~~~--DrpGLL~~I~~~L~~~g~nI~~A~i~T-~~~~~~d~F~v~~~~~g~ 181 (358)
.+.+.+..+ |+||-|+++...|+.+|+|+...+..- .++...-.|+|.- +|.
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~ 260 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL--DAA 260 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE--SSC
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE--eCC
Confidence 344444444 799999999999999999999888876 4555667788866 454
No 68
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=78.51 E-value=23 Score=35.06 Aligned_cols=138 Identities=10% Similarity=0.183 Sum_probs=81.6
Q ss_pred CeEEEEEEe---CCcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHcCC
Q 018281 127 DHTAIELIG---RDRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVNDDTTCRAVGDQTRLSLMEEQLKNILRGC 203 (358)
Q Consensus 127 ~~t~v~V~~---~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~~~~g~~~~~~~~~~~L~~~L~~~L~~~ 203 (358)
+.+.|+|.+ .++||++++|..+|+++|+||..-... ...-.|.|.. .+.... +. ..+.++. +.+.+..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~ss----e~sis~~v~~-~~~~~~-~~-~~~~l~~-~~~el~~- 410 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATS----EVSISLTLDP-SKLWSR-EL-IQQELDH-VVEELEK- 410 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEEE----TTEEEEEECC-GGGSSS-CC-CHHHHHH-HHHHHTT-
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEeC----CCeEEEEEec-hHhhhh-hH-HHHHHHH-HHHHhCC-
Confidence 566788885 689999999999999999999866321 2233455544 111110 00 0011111 1111111
Q ss_pred CCCcchhhccccccccccchhhhhhhhhcccccccCCCCCCCccCCCCCCCCCEEEEecCCCCceeEEEEEeC--Ccchh
Q 018281 204 DDEDSEKVARTSFSMGFTHVDRRLHQMFFADRDYEGGGVTTADQVDHTPSFKPEITVERLEDKGYSVVNVKCR--DRAKL 281 (358)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~v~n~~~~~~t~l~v~~~--DrpGL 281 (358)
. ..|.+++ +...|.|.+. .+||+
T Consensus 411 ~---------------------------------------------------~~v~~~~----~~a~VsiVG~m~~~~Gv 435 (510)
T 2cdq_A 411 I---------------------------------------------------AVVNLLK----GRAIISLIGNVQHSSLI 435 (510)
T ss_dssp T---------------------------------------------------SEEEEEE----EEEEEEEEECGGGHHHH
T ss_pred C---------------------------------------------------CeEEEeC----CcEEEEEEEECCCChhH
Confidence 0 1233332 4567777776 88999
Q ss_pred HHHHHHHhhcCCeEEEEEEEEecCCceE-EEEEEEeCCCCcCCCHHHHHHHHHHHHHHHh
Q 018281 282 MFDIVCTLTDMQYVVFHAAISSDGPHAS-QEYYIRHMDGCILDTEGEKERVIKCLEAAIR 340 (358)
Q Consensus 282 L~~I~~~l~~~~v~I~~a~i~T~g~~a~-d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~ 340 (358)
..++-.+|.+.|+||.+.. .|..-. =.|.|.. +..++.-++|..++-
T Consensus 436 aa~~f~aL~~~~InI~mIs---qGsSei~Is~vV~~---------~d~~~Av~aLH~~f~ 483 (510)
T 2cdq_A 436 LERAFHVLYTKGVNVQMIS---QGASKVNISFIVNE---------AEAEGCVQALHKSFF 483 (510)
T ss_dssp HHHHHHHHHHHTCCCSEEE---ECTTCSEEEEEEEH---------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEE---ecCCcceEEEEEeH---------HHHHHHHHHHHHHHh
Confidence 9999999999999998763 344333 3455543 345555566666654
No 69
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=74.63 E-value=4.8 Score=38.89 Aligned_cols=51 Identities=6% Similarity=0.088 Sum_probs=41.5
Q ss_pred CceeEEEEEeCCcchhHHHHHHHhhcCCeEEEEEEEEec-CCceEEEEEEEe
Q 018281 266 KGYSVVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSD-GPHASQEYYIRH 316 (358)
Q Consensus 266 ~~~t~l~v~~~DrpGLL~~I~~~l~~~~v~I~~a~i~T~-g~~a~d~F~v~~ 316 (358)
...|-|-+..+|+||-|+++-..|+.+|||+.+..-.-. +...+=.|||-.
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 356667778899999999999999999999999888644 455677888843
No 70
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=73.53 E-value=3 Score=40.64 Aligned_cols=53 Identities=21% Similarity=0.324 Sum_probs=36.9
Q ss_pred CCCCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEec--CCeeEEEEEEEe
Q 018281 124 SVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTH--NRRIACVLYVND 176 (358)
Q Consensus 124 ~~~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~--~~~~~d~F~v~~ 176 (358)
.....+-+.+...|+||.|++|+++|.++|++|.+..-.-. ++.......++.
T Consensus 355 ~~~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 355 AVRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp GCEEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred HcceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 34467788899999999999999999999999987655432 112234445555
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=57.65 E-value=18 Score=34.92 Aligned_cols=52 Identities=8% Similarity=0.098 Sum_probs=41.3
Q ss_pred CCCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEe-cCCeeEEEEEEEe
Q 018281 125 VGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWT-HNRRIACVLYVND 176 (358)
Q Consensus 125 ~~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T-~~~~~~d~F~v~~ 176 (358)
....|.|.+..+|+||-|+++.+.|+.+|+|+...+..- .++...-.|+|.-
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 345667777778999999999999999999998777765 4445667788865
No 72
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=50.33 E-value=52 Score=25.00 Aligned_cols=49 Identities=18% Similarity=0.103 Sum_probs=36.3
Q ss_pred CeEEEEEEecCCcchHHHHHHHHhhCCce-EEEEEEEeeCCEEEEEEEEEeCCCCCC
Q 018281 34 ECTVVKVDSVNKPGILLEVVQVLSDLDLI-ITKAYISSDGGWFMDVFHVIDQQGKKI 89 (358)
Q Consensus 34 ~~~~v~v~~~DrpGLl~~i~~~L~~~gln-I~~A~I~t~~g~~~d~f~V~~~~g~~~ 89 (358)
+++.+.+.+.| +......|...|+. +...-.....|.. |++.|++|+.+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45677888888 78888999999999 7754444444543 88999999954
No 73
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=47.98 E-value=77 Score=31.23 Aligned_cols=134 Identities=16% Similarity=0.136 Sum_probs=77.2
Q ss_pred EEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCC----CCC-
Q 018281 36 TVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGH----ITA- 110 (358)
Q Consensus 36 ~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~----~~~- 110 (358)
..+.|.-+||||-|.+++.+|. +-||.+-.=...+.....+++...-.+. ++..+.|.+.|...-- ...
T Consensus 339 ~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~~~ 412 (514)
T 1tdj_A 339 ALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRLSRG----LEERKEILQMLNDGGYSVVDLSDD 412 (514)
T ss_dssp EEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEECSST----HHHHHHHHHHHTSSSCEEETTSSC
T ss_pred ccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECCCC
Confidence 5677888999999999999888 6888865543322212233444332221 3567888888875421 110
Q ss_pred -CcccCCceeeee--cCCCCeEEEEEEeCCcccHHHHHHHHHHhCCCcEEEEEEEecC---CeeEEEEEEEe
Q 018281 111 -GAKTWPSKQVGV--HSVGDHTAIELIGRDRPGLLSEISAVLANLRFNVAAAEVWTHN---RRIACVLYVND 176 (358)
Q Consensus 111 -~~r~~~~~~v~~--~~~~~~t~v~V~~~DrpGLL~~I~~~L~~~g~nI~~A~i~T~~---~~~~d~F~v~~ 176 (358)
..+...+.-|.- ....+-....+.-|.|||-|.+....|.. ++||.--+-..+| |++.--|.+..
T Consensus 413 ~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~~~~~~~~~~~~~ 483 (514)
T 1tdj_A 413 EMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTDYGRVLAAFELGD 483 (514)
T ss_dssp HHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTCSSCEEEEEC---
T ss_pred HHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCCcccEEEEEEcCC
Confidence 000000000000 01123446778899999999999999975 6787766655544 45555555544
No 74
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=40.04 E-value=75 Score=24.06 Aligned_cols=49 Identities=10% Similarity=0.064 Sum_probs=34.9
Q ss_pred ceeEEEEEeCCcchhHHHHHHHhhcCCeE-EEEEEEEecCCceEEEEEEEeCCCCcC
Q 018281 267 GYSVVNVKCRDRAKLMFDIVCTLTDMQYV-VFHAAISSDGPHASQEYYIRHMDGCIL 322 (358)
Q Consensus 267 ~~t~l~v~~~DrpGLL~~I~~~l~~~~v~-I~~a~i~T~g~~a~d~F~v~~~~g~~l 322 (358)
..+.+.+.+.| +....+.|.+.|+. +...-.... ...- |+++|++|..+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~--~G~~-~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMP--DGKK-AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC---CEE-EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCC--CccE-EEEECCCCCEE
Confidence 34568888888 88888999999999 655333221 1222 99999999865
No 75
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=31.77 E-value=1.7e+02 Score=22.31 Aligned_cols=65 Identities=22% Similarity=0.230 Sum_probs=46.8
Q ss_pred CCeEEEEEEecCCcchHHHHHHHHhhC---CceEEEEEEEeeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCC
Q 018281 33 PECTVVKVDSVNKPGILLEVVQVLSDL---DLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGP 104 (358)
Q Consensus 33 ~~~~~v~v~~~DrpGLl~~i~~~L~~~---glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~ 104 (358)
+-.+.+.|.+++.+++...|..++..+ +..+ .-+-++.|.+..-++.|. +.+++.+..|-+.|..
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v~------v~S~eQv~aiY~~L~~ 101 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITIN------ATHIEQVETLYEELGK 101 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEEC------CSSHHHHHHHHHHHSC
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEEE------ECCHHHHHHHHHHHhc
Confidence 346889999999999999999999988 7777 334444666666444443 3344567788888864
No 76
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=31.27 E-value=32 Score=27.89 Aligned_cols=34 Identities=9% Similarity=0.004 Sum_probs=28.1
Q ss_pred CCeEEEEEEe---CCcccHHHHHHHHHHhCCCcEEEE
Q 018281 126 GDHTAIELIG---RDRPGLLSEISAVLANLRFNVAAA 159 (358)
Q Consensus 126 ~~~t~v~V~~---~DrpGLL~~I~~~L~~~g~nI~~A 159 (358)
.+...|+|.+ ++.||.++++..+|+++|+||..-
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I 52 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMV 52 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCE
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEE
Confidence 4566788774 589999999999999999999643
No 77
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=28.35 E-value=28 Score=33.75 Aligned_cols=104 Identities=18% Similarity=0.224 Sum_probs=63.1
Q ss_pred CeEEEEEEe---cCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCCCChhHHHHHHHHHCCCCCCCC
Q 018281 34 ECTVVKVDS---VNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKITDGKTIDYIEKALGPKGHITA 110 (358)
Q Consensus 34 ~~~~v~v~~---~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~~~~~~~~~l~~~L~~~~~~~~ 110 (358)
+.+.|+|.+ .+.||..++|..+|+.+|+||.--. +. + .--+|.|...+..........+++...|.....
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--ss-~-~sis~~v~~~~~~~~~~~~~~~~~~~el~~~~~--- 379 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--TS-E-VSVALTLDTTGSTSTGDTLLTQSLLMELSALCR--- 379 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--EE-T-TEEEEEECCCCCSSTTCCSSCHHHHHHHHHHSC---
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--eC-C-CeEEEEEeccccchhhHHHHHHHHHHHhccCCe---
Confidence 445566665 4678999999999999999987443 32 2 223466753321110011233444444432100
Q ss_pred CcccCCceeeeecCCCCeEEEEEEeC---CcccHHHHHHHHHHhCCCcEE
Q 018281 111 GAKTWPSKQVGVHSVGDHTAIELIGR---DRPGLLSEISAVLANLRFNVA 157 (358)
Q Consensus 111 ~~r~~~~~~v~~~~~~~~t~v~V~~~---DrpGLL~~I~~~L~~~g~nI~ 157 (358)
+ ....+...|.|.|. ..||+.+++..+|.+ +||.
T Consensus 380 ---------v--~~~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~ 416 (449)
T 2j0w_A 380 ---------V--EVEEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIR 416 (449)
T ss_dssp ---------E--EEEEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCC
T ss_pred ---------E--EEeCCeEEEEEECCCccccccHHHHHHHHHhC--CCeE
Confidence 1 11236678899987 589999999999966 6665
No 78
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=27.95 E-value=1.4e+02 Score=23.14 Aligned_cols=46 Identities=11% Similarity=0.157 Sum_probs=33.9
Q ss_pred EEEEEeCCcchhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcC
Q 018281 270 VVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCIL 322 (358)
Q Consensus 270 ~l~v~~~DrpGLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l 322 (358)
.+.+.+.| +.++.+.|.+.|+.+...-.....+ -.||+.|++|..+
T Consensus 68 hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G---~~~~~~DPdG~~i 113 (144)
T 3r6a_A 68 QATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTG---RNMTVRHSDGSVI 113 (144)
T ss_dssp CEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTE---EEEEEECTTSCEE
T ss_pred EEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCc---eEEEEECCCCCEE
Confidence 46666667 6777888999999987765544333 4689999999865
No 79
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=26.91 E-value=46 Score=26.61 Aligned_cols=34 Identities=15% Similarity=0.374 Sum_probs=27.5
Q ss_pred ceeEEEEEeC---CcchhHHHHHHHhhcCCeEEEEEE
Q 018281 267 GYSVVNVKCR---DRAKLMFDIVCTLTDMQYVVFHAA 300 (358)
Q Consensus 267 ~~t~l~v~~~---DrpGLL~~I~~~l~~~~v~I~~a~ 300 (358)
.+-.|+|.++ |-.|+++.|+..|++.||.|....
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~iS 97 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVS 97 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEE
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEE
Confidence 4556777654 889999999999999999987643
No 80
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=24.12 E-value=60 Score=25.92 Aligned_cols=45 Identities=18% Similarity=0.205 Sum_probs=31.4
Q ss_pred CeEEEEEEeC---CcccHHHHHHHHHHhCCCcEEEEEEEecCCeeEEEEEEEe
Q 018281 127 DHTAIELIGR---DRPGLLSEISAVLANLRFNVAAAEVWTHNRRIACVLYVND 176 (358)
Q Consensus 127 ~~t~v~V~~~---DrpGLL~~I~~~L~~~g~nI~~A~i~T~~~~~~d~F~v~~ 176 (358)
.+-.|+|.++ |-.|+++.+++.|++.|++|.- |.| +..|-..|..
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~--iSt---y~tD~IlVp~ 108 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFV--VST---FDGDHLLVRS 108 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE--EEC---SSCEEEEEEG
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEE--EEe---ccccEEEEeH
Confidence 4445666655 8889999999999999999874 333 2344455544
No 81
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=23.99 E-value=2.9e+02 Score=22.53 Aligned_cols=71 Identities=7% Similarity=0.112 Sum_probs=50.6
Q ss_pred hHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcCCCHHHHHHHHHHHHHHHhhcc----CCceEEEEEecC
Q 018281 281 LMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCILDTEGEKERVIKCLEAAIRRRV----SEVSKFSFYSMG 355 (358)
Q Consensus 281 LL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~~l~~~L~~~l~~~~----~~~~~~~~~~~~ 355 (358)
+..-+..++.. |+.+...++...|..-.=..||-...| ++ =++++.+.++|...|++.. .+.-.+|++|-|
T Consensus 14 v~~li~p~~~~-g~eLvdve~~~~g~~~~LrV~ID~~~g--i~-lddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPG 88 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG--IT-LNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPG 88 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEEEETTEEEEEEEEECSSC--CC-HHHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCS
T ss_pred HHHHHHHHHcC-CcEEEEEEEEecCCCcEEEEEEECCCC--CC-HHHHHHHHHHHHHHhccccccCCCCCeEEEEeCCC
Confidence 33445566667 999999999888776554556754434 33 3578999999999998322 357789999987
No 82
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=23.23 E-value=1.7e+02 Score=22.57 Aligned_cols=47 Identities=17% Similarity=0.064 Sum_probs=33.6
Q ss_pred EEEEEEecCCcchHHHHHHHHhhCCceEEEEEEEeeCCEEEEEEEEEeCCCCCC
Q 018281 36 TVVKVDSVNKPGILLEVVQVLSDLDLIITKAYISSDGGWFMDVFHVIDQQGKKI 89 (358)
Q Consensus 36 ~~v~v~~~DrpGLl~~i~~~L~~~glnI~~A~I~t~~g~~~d~f~V~~~~g~~~ 89 (358)
.-+.+.+.| +..+...|...|+.|...-.....|+ .|++.|++|+.+
T Consensus 67 ~hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G~---~~~~~DPdG~~i 113 (144)
T 3r6a_A 67 TQATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTGR---NMTVRHSDGSVI 113 (144)
T ss_dssp CCEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTEE---EEEEECTTSCEE
T ss_pred eEEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCce---EEEEECCCCCEE
Confidence 344555555 66778888999999987655555553 478999999954
No 83
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=23.13 E-value=2.3e+02 Score=20.81 Aligned_cols=49 Identities=10% Similarity=0.191 Sum_probs=33.9
Q ss_pred EEEEEeCCcchhHHHHHHHhhcCCeEEEEEEEEecCCceEEEEEEEeCCCCcC
Q 018281 270 VVNVKCRDRAKLMFDIVCTLTDMQYVVFHAAISSDGPHASQEYYIRHMDGCIL 322 (358)
Q Consensus 270 ~l~v~~~DrpGLL~~I~~~l~~~~v~I~~a~i~T~g~~a~d~F~v~~~~g~~l 322 (358)
-|-+.+.| +....+.|.+.|+.+...-....+....-.+|+.|++|..+
T Consensus 80 hiaf~v~d----i~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~i 128 (133)
T 3hdp_A 80 HICYEVED----IQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLI 128 (133)
T ss_dssp EEEEEESC----HHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEE
T ss_pred EEEEEcCC----HHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEE
Confidence 46666677 67788889999999877532222322346789999998754
No 84
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=23.00 E-value=89 Score=24.84 Aligned_cols=34 Identities=12% Similarity=0.105 Sum_probs=27.2
Q ss_pred ceeEEEEEe---CCcchhHHHHHHHhhcCCeEEEEEE
Q 018281 267 GYSVVNVKC---RDRAKLMFDIVCTLTDMQYVVFHAA 300 (358)
Q Consensus 267 ~~t~l~v~~---~DrpGLL~~I~~~l~~~~v~I~~a~ 300 (358)
.+..|+|.+ -|-.|+++.|+..|++.||.|....
T Consensus 70 ~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iS 106 (133)
T 1zvp_A 70 LFSLITLTVHSSLEAVGLTAAFATKLAEHGISANVIA 106 (133)
T ss_dssp CEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEE
T ss_pred CeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEE
Confidence 455666654 7999999999999999999997643
No 85
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=21.40 E-value=1.1e+02 Score=24.18 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=25.5
Q ss_pred CeEEEEEEe---CCcccHHHHHHHHHHhCCCcEEE
Q 018281 127 DHTAIELIG---RDRPGLLSEISAVLANLRFNVAA 158 (358)
Q Consensus 127 ~~t~v~V~~---~DrpGLL~~I~~~L~~~g~nI~~ 158 (358)
.+-.|++.+ -|-.|+++.+++.|++.|++|.-
T Consensus 70 ~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~ 104 (133)
T 1zvp_A 70 LFSLITLTVHSSLEAVGLTAAFATKLAEHGISANV 104 (133)
T ss_dssp CEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEE
T ss_pred CeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEE
Confidence 444556554 58999999999999999999874
Done!