Query 018289
Match_columns 358
No_of_seqs 284 out of 1075
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 07:44:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018289.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018289hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2863 RNA lariat debranching 100.0 7E-108 2E-112 782.3 18.0 353 1-353 1-365 (456)
2 cd00844 MPP_Dbr1_N Dbr1 RNA la 100.0 1.8E-72 3.9E-77 534.9 25.5 257 3-259 1-262 (262)
3 KOG2476 Uncharacterized conser 100.0 4.8E-40 1E-44 323.7 19.2 227 1-266 6-243 (528)
4 cd07380 MPP_CWF19_N Schizosacc 100.0 8.6E-38 1.9E-42 274.3 13.8 144 4-252 1-150 (150)
5 PF05011 DBR1: Lariat debranch 100.0 1.4E-28 3.1E-33 214.7 11.7 120 235-354 1-134 (145)
6 cd07388 MPP_Tt1561 Thermus the 99.9 6.5E-22 1.4E-26 184.5 21.9 209 1-265 5-217 (224)
7 cd07392 MPP_PAE1087 Pyrobaculu 99.9 5.5E-21 1.2E-25 169.8 18.8 186 3-249 1-187 (188)
8 COG2129 Predicted phosphoester 99.8 2.7E-18 5.8E-23 158.2 20.1 209 1-265 4-215 (226)
9 PF14582 Metallophos_3: Metall 99.7 1.5E-16 3.2E-21 146.7 15.2 211 2-252 7-235 (255)
10 cd07397 MPP_DevT Myxococcus xa 99.6 6.9E-15 1.5E-19 138.2 14.3 209 1-252 1-234 (238)
11 cd07379 MPP_239FB Homo sapiens 99.6 3.5E-14 7.7E-19 121.5 12.9 134 2-250 1-135 (135)
12 TIGR03729 acc_ester putative p 99.5 7.4E-13 1.6E-17 124.0 15.6 208 2-250 1-236 (239)
13 cd07402 MPP_GpdQ Enterobacter 99.5 3E-12 6.5E-17 118.7 18.5 196 2-252 1-210 (240)
14 PF00149 Metallophos: Calcineu 99.5 4E-13 8.6E-18 112.5 10.7 189 1-230 1-200 (200)
15 KOG3947 Phosphoesterases [Gene 99.5 5.9E-13 1.3E-17 125.6 12.4 207 2-267 63-299 (305)
16 cd07404 MPP_MS158 Microscilla 99.4 3.6E-12 7.7E-17 112.4 11.3 153 3-235 1-154 (166)
17 cd07403 MPP_TTHA0053 Thermus t 99.3 1.8E-11 3.8E-16 104.7 10.8 67 168-251 57-123 (129)
18 PF12850 Metallophos_2: Calcin 99.3 3.9E-11 8.4E-16 103.3 12.7 150 1-265 1-154 (156)
19 PRK11148 cyclic 3',5'-adenosin 99.2 1.1E-09 2.4E-14 104.7 19.6 182 1-234 15-211 (275)
20 cd00841 MPP_YfcE Escherichia c 99.2 7.7E-10 1.7E-14 96.2 15.7 59 2-88 1-59 (155)
21 cd07393 MPP_DR1119 Deinococcus 99.2 1.6E-09 3.5E-14 101.3 17.2 180 3-233 1-208 (232)
22 cd07396 MPP_Nbla03831 Homo sap 99.2 4.6E-09 9.9E-14 100.1 20.4 106 1-126 1-121 (267)
23 TIGR00040 yfcE phosphoesterase 99.1 1.6E-09 3.4E-14 95.1 14.5 64 1-88 1-64 (158)
24 cd07385 MPP_YkuE_C Bacillus su 99.1 1.4E-09 3.1E-14 99.7 13.3 104 1-121 2-110 (223)
25 PRK05340 UDP-2,3-diacylglucosa 99.1 1.5E-09 3.4E-14 101.8 13.1 221 1-260 1-227 (241)
26 cd07400 MPP_YydB Bacillus subt 99.1 2.6E-09 5.6E-14 91.6 13.0 50 170-235 81-130 (144)
27 cd00838 MPP_superfamily metall 99.1 1.9E-09 4.1E-14 88.2 11.7 119 4-234 1-119 (131)
28 cd00840 MPP_Mre11_N Mre11 nucl 98.9 5.3E-09 1.1E-13 95.4 10.2 183 2-232 1-203 (223)
29 cd00839 MPP_PAPs purple acid p 98.9 1.6E-08 3.4E-13 96.8 13.3 186 1-230 5-205 (294)
30 PRK04036 DNA polymerase II sma 98.9 7.5E-08 1.6E-12 100.0 18.7 125 1-127 244-388 (504)
31 TIGR01854 lipid_A_lpxH UDP-2,3 98.9 1.5E-07 3.3E-12 87.9 18.2 111 3-126 1-114 (231)
32 cd07395 MPP_CSTP1 Homo sapiens 98.8 5.6E-07 1.2E-11 85.1 20.9 192 2-234 6-222 (262)
33 cd07401 MPP_TMEM62_N Homo sapi 98.8 2.1E-07 4.5E-12 88.5 17.0 191 3-232 2-212 (256)
34 cd07394 MPP_Vps29 Homo sapiens 98.8 2.1E-07 4.5E-12 84.0 15.2 38 210-253 98-135 (178)
35 cd07399 MPP_YvnB Bacillus subt 98.8 4E-07 8.7E-12 84.2 17.2 195 1-270 1-205 (214)
36 PRK11340 phosphodiesterase Yae 98.8 1.9E-07 4E-12 89.5 15.2 104 1-124 50-166 (271)
37 cd07378 MPP_ACP5 Homo sapiens 98.8 3.3E-07 7.2E-12 87.0 16.7 207 1-251 1-230 (277)
38 PLN02533 probable purple acid 98.7 3.8E-07 8.3E-12 93.0 17.3 181 1-233 140-336 (427)
39 PHA02546 47 endonuclease subun 98.7 1.5E-07 3.3E-12 93.0 13.5 110 1-123 1-128 (340)
40 cd07386 MPP_DNA_pol_II_small_a 98.7 2.5E-07 5.4E-12 86.9 13.4 219 4-269 2-236 (243)
41 cd08163 MPP_Cdc1 Saccharomyces 98.7 1.1E-06 2.4E-11 83.9 17.8 173 30-234 45-232 (257)
42 PRK09453 phosphodiesterase; Pr 98.7 7.4E-08 1.6E-12 86.6 9.1 105 1-125 1-105 (182)
43 COG0622 Predicted phosphoester 98.6 1.4E-07 3E-12 84.9 8.2 89 1-126 2-90 (172)
44 PHA03008 hypothetical protein; 98.6 1.1E-07 2.5E-12 85.9 7.5 96 102-228 99-202 (234)
45 cd07383 MPP_Dcr2 Saccharomyces 98.5 1.1E-06 2.4E-11 79.8 12.1 74 1-86 3-87 (199)
46 PHA02239 putative protein phos 98.5 3.4E-07 7.4E-12 86.3 7.2 73 1-88 1-73 (235)
47 COG1409 Icc Predicted phosphoh 98.4 9.6E-06 2.1E-10 76.3 16.6 77 1-93 1-83 (301)
48 PRK00166 apaH diadenosine tetr 98.3 5.1E-07 1.1E-11 87.0 5.2 69 1-88 1-69 (275)
49 COG1768 Predicted phosphohydro 98.3 1.5E-05 3.3E-10 71.8 14.0 175 1-230 1-199 (230)
50 cd00845 MPP_UshA_N_like Escher 98.3 1.5E-05 3.2E-10 74.7 14.9 112 1-127 1-136 (252)
51 cd07423 MPP_PrpE Bacillus subt 98.3 1.1E-06 2.3E-11 82.4 5.5 73 1-88 1-80 (234)
52 cd07410 MPP_CpdB_N Escherichia 98.3 6.4E-05 1.4E-09 71.9 17.7 223 1-265 1-257 (277)
53 cd08166 MPP_Cdc1_like_1 unchar 98.2 1.6E-05 3.4E-10 73.0 11.9 42 170-236 112-153 (195)
54 COG0420 SbcD DNA repair exonuc 98.2 3E-06 6.5E-11 85.0 7.9 78 1-91 1-91 (390)
55 cd07424 MPP_PrpA_PrpB PrpA and 98.2 2.4E-06 5.3E-11 78.4 6.5 67 1-88 1-67 (207)
56 TIGR00619 sbcd exonuclease Sbc 98.2 5E-06 1.1E-10 79.0 7.6 78 1-90 1-90 (253)
57 cd07412 MPP_YhcR_N Bacillus su 98.1 0.00014 3E-09 70.4 17.0 222 1-265 1-270 (288)
58 cd07406 MPP_CG11883_N Drosophi 98.1 0.00031 6.7E-09 66.7 19.1 207 1-266 1-234 (257)
59 TIGR00583 mre11 DNA repair pro 98.1 1.2E-05 2.5E-10 81.6 9.2 80 1-89 4-124 (405)
60 cd07398 MPP_YbbF-LpxH Escheric 98.1 1.1E-05 2.3E-10 73.7 8.0 112 4-127 1-117 (217)
61 PRK10966 exonuclease subunit S 98.0 1.1E-05 2.5E-10 81.8 7.9 96 1-109 1-107 (407)
62 cd07409 MPP_CD73_N CD73 ecto-5 98.0 0.00064 1.4E-08 65.5 19.2 112 1-127 1-149 (281)
63 PRK11439 pphA serine/threonine 98.0 7.4E-06 1.6E-10 76.0 5.4 67 1-88 17-83 (218)
64 PRK13625 bis(5'-nucleosyl)-tet 98.0 1.1E-05 2.3E-10 76.4 5.6 73 1-88 1-79 (245)
65 cd07408 MPP_SA0022_N Staphyloc 98.0 0.00031 6.6E-09 66.7 15.5 111 1-127 1-135 (257)
66 PRK09968 serine/threonine-spec 97.9 7.3E-06 1.6E-10 76.2 4.1 66 2-88 16-81 (218)
67 cd08162 MPP_PhoA_N Synechococc 97.9 0.0016 3.6E-08 63.9 20.1 119 1-127 1-165 (313)
68 cd07405 MPP_UshA_N Escherichia 97.9 0.0015 3.2E-08 63.2 18.8 193 1-232 1-223 (285)
69 TIGR00668 apaH bis(5'-nucleosy 97.9 1.6E-05 3.5E-10 76.7 4.7 69 1-88 1-69 (279)
70 cd00842 MPP_ASMase acid sphing 97.8 0.00052 1.1E-08 66.1 14.9 191 14-235 53-266 (296)
71 cd07425 MPP_Shelphs Shewanella 97.8 3.3E-05 7.3E-10 71.3 6.2 75 4-88 1-80 (208)
72 cd07421 MPP_Rhilphs Rhilph pho 97.8 5.7E-05 1.2E-09 73.4 7.8 74 2-88 3-80 (304)
73 cd00144 MPP_PPP_family phospho 97.8 3.5E-05 7.5E-10 70.8 6.1 68 4-88 1-68 (225)
74 cd07422 MPP_ApaH Escherichia c 97.8 3.4E-05 7.5E-10 73.7 6.0 67 3-88 1-67 (257)
75 cd07411 MPP_SoxB_N Thermus the 97.8 0.0016 3.5E-08 62.0 16.8 111 1-127 1-147 (264)
76 cd07413 MPP_PA3087 Pseudomonas 97.7 5.1E-05 1.1E-09 70.7 6.2 70 4-88 2-76 (222)
77 PRK09419 bifunctional 2',3'-cy 97.7 0.001 2.2E-08 75.9 16.4 191 1-235 661-887 (1163)
78 KOG2679 Purple (tartrate-resis 97.6 0.00081 1.8E-08 64.4 11.3 236 1-278 44-298 (336)
79 cd07387 MPP_PolD2_C PolD2 (DNA 97.5 0.0046 1E-07 59.2 16.2 220 2-265 1-248 (257)
80 cd07390 MPP_AQ1575 Aquifex aeo 97.5 0.00043 9.3E-09 61.5 8.6 98 4-124 2-114 (168)
81 KOG1378 Purple acid phosphatas 97.5 0.0013 2.8E-08 67.1 12.8 183 2-230 149-344 (452)
82 TIGR01530 nadN NAD pyrophospha 97.5 0.0021 4.6E-08 67.7 15.0 110 1-125 1-146 (550)
83 PRK09558 ushA bifunctional UDP 97.5 0.0038 8.1E-08 65.8 16.6 112 1-126 35-172 (551)
84 COG0737 UshA 5'-nucleotidase/2 97.5 0.004 8.6E-08 65.0 16.3 112 1-126 27-167 (517)
85 COG1311 HYS2 Archaeal DNA poly 97.4 0.0034 7.3E-08 64.4 14.5 215 2-269 227-463 (481)
86 PTZ00422 glideosome-associated 97.4 0.012 2.6E-07 59.6 18.2 190 1-231 27-261 (394)
87 cd07391 MPP_PF1019 Pyrococcus 97.3 0.00066 1.4E-08 60.5 6.9 72 4-88 1-88 (172)
88 TIGR03767 P_acnes_RR metalloph 97.3 0.028 6.1E-07 58.2 19.4 56 165-231 336-393 (496)
89 TIGR00024 SbcD_rel_arch putati 97.2 0.0011 2.3E-08 62.2 7.4 71 2-88 16-102 (225)
90 smart00156 PP2Ac Protein phosp 97.2 0.00075 1.6E-08 65.0 6.3 72 1-88 28-99 (271)
91 COG2908 Uncharacterized protei 97.2 0.0021 4.5E-08 60.5 8.9 108 4-125 1-113 (237)
92 cd07420 MPP_RdgC Drosophila me 97.0 0.0011 2.4E-08 65.4 5.9 62 204-266 250-311 (321)
93 cd07416 MPP_PP2B PP2B, metallo 97.0 0.0012 2.7E-08 64.6 6.2 71 2-88 44-114 (305)
94 PRK09419 bifunctional 2',3'-cy 96.9 0.03 6.6E-07 64.1 17.0 197 1-232 42-282 (1163)
95 cd07414 MPP_PP1_PPKL PP1, PPKL 96.9 0.0018 3.9E-08 63.1 5.9 60 204-266 219-280 (293)
96 PTZ00480 serine/threonine-prot 96.8 0.0025 5.5E-08 62.8 6.3 60 204-266 228-289 (320)
97 PRK09418 bifunctional 2',3'-cy 96.8 0.063 1.4E-06 59.0 17.3 117 1-126 40-208 (780)
98 cd07415 MPP_PP2A_PP4_PP6 PP2A, 96.7 0.0027 5.8E-08 61.7 5.6 62 204-266 211-272 (285)
99 PTZ00239 serine/threonine prot 96.7 0.0031 6.6E-08 61.8 5.8 63 204-266 212-274 (303)
100 cd07417 MPP_PP5_C PP5, C-termi 96.6 0.0039 8.4E-08 61.4 6.2 59 204-265 230-290 (316)
101 COG1407 Predicted ICC-like pho 96.5 0.0088 1.9E-07 56.4 7.8 74 2-88 21-110 (235)
102 PTZ00244 serine/threonine-prot 96.5 0.0037 8E-08 61.0 5.4 59 204-265 221-281 (294)
103 PRK09420 cpdB bifunctional 2', 96.5 0.1 2.2E-06 56.3 16.5 116 1-126 26-182 (649)
104 cd07407 MPP_YHR202W_N Saccharo 96.5 0.018 4E-07 55.7 9.7 114 1-126 6-155 (282)
105 cd07382 MPP_DR1281 Deinococcus 96.4 0.063 1.4E-06 51.4 12.9 41 2-44 1-43 (255)
106 PF04042 DNA_pol_E_B: DNA poly 96.4 0.024 5.2E-07 51.7 9.6 122 3-126 1-137 (209)
107 cd07384 MPP_Cdc1_like Saccharo 96.4 0.01 2.3E-07 53.1 7.0 52 30-87 45-99 (171)
108 cd08165 MPP_MPPE1 human MPPE1 96.4 0.012 2.7E-07 51.8 7.3 50 30-87 38-88 (156)
109 cd07419 MPP_Bsu1_C Arabidopsis 96.4 0.0099 2.1E-07 58.4 7.3 59 204-265 239-299 (311)
110 TIGR01390 CycNucDiestase 2',3' 96.3 0.13 2.9E-06 55.2 16.2 116 1-126 3-159 (626)
111 cd07418 MPP_PP7 PP7, metalloph 96.3 0.0072 1.6E-07 60.9 6.1 70 2-88 67-138 (377)
112 KOG2310 DNA repair exonuclease 96.3 0.013 2.7E-07 61.0 7.5 79 1-88 14-133 (646)
113 COG4186 Predicted phosphoester 96.2 0.015 3.2E-07 51.7 6.7 69 2-88 5-86 (186)
114 TIGR00282 metallophosphoestera 96.0 0.048 1E-06 52.5 9.8 41 1-43 1-43 (266)
115 KOG3325 Membrane coat complex 96.0 0.029 6.2E-07 49.5 7.3 111 1-173 1-113 (183)
116 PRK11907 bifunctional 2',3'-cy 95.8 0.13 2.8E-06 56.8 13.5 117 1-126 116-273 (814)
117 COG1408 Predicted phosphohydro 95.7 0.026 5.6E-07 54.8 6.8 74 2-89 46-119 (284)
118 cd08164 MPP_Ted1 Saccharomyces 94.7 0.11 2.4E-06 47.7 7.2 52 30-87 44-110 (193)
119 KOG0373 Serine/threonine speci 94.1 0.1 2.3E-06 48.8 5.7 69 3-88 48-117 (306)
120 KOG3662 Cell division control 94.1 0.21 4.6E-06 50.8 8.2 52 30-88 93-144 (410)
121 KOG0372 Serine/threonine speci 93.1 0.19 4.2E-06 47.8 5.7 70 3-89 45-115 (303)
122 TIGR03768 RPA4764 metallophosp 92.5 0.25 5.4E-06 51.1 6.0 62 13-88 84-170 (492)
123 KOG0371 Serine/threonine prote 91.3 0.5 1.1E-05 45.4 6.1 69 3-89 62-132 (319)
124 KOG0374 Serine/threonine speci 91.0 0.4 8.7E-06 47.6 5.5 60 204-266 230-291 (331)
125 smart00854 PGA_cap Bacterial c 91.0 13 0.00029 34.6 18.6 113 2-128 1-137 (239)
126 cd07381 MPP_CapA CapA and rela 90.4 5.9 0.00013 36.8 12.6 32 217-252 206-237 (239)
127 COG1692 Calcineurin-like phosp 88.1 1 2.2E-05 42.9 5.5 42 1-44 1-44 (266)
128 KOG1432 Predicted DNA repair e 86.6 1.4 3E-05 44.0 5.7 51 30-91 100-150 (379)
129 KOG3818 DNA polymerase epsilon 85.7 6 0.00013 40.8 9.8 109 2-125 284-408 (525)
130 KOG0375 Serine-threonine phosp 85.6 1.4 3E-05 44.2 5.1 69 3-88 90-159 (517)
131 KOG2863 RNA lariat debranching 81.1 1.5 3.2E-05 44.1 3.3 61 272-333 357-423 (456)
132 cd07389 MPP_PhoD Bacillus subt 72.5 5.6 0.00012 36.4 4.5 40 2-43 1-42 (228)
133 COG1058 CinA Predicted nucleot 72.0 22 0.00048 34.1 8.5 106 2-126 39-153 (255)
134 KOG0377 Protein serine/threoni 69.7 1.6 3.6E-05 44.7 0.3 69 3-88 167-237 (631)
135 PF09423 PhoD: PhoD-like phosp 67.0 4.9 0.00011 41.3 3.1 39 1-44 106-146 (453)
136 PF10686 DUF2493: Protein of u 63.6 21 0.00045 27.4 5.3 37 1-40 4-41 (71)
137 KOG3770 Acid sphingomyelinase 60.6 26 0.00057 37.3 7.1 67 13-88 194-263 (577)
138 PF13277 YmdB: YmdB-like prote 59.5 25 0.00054 33.7 6.1 39 4-44 1-41 (253)
139 cd08165 MPP_MPPE1 human MPPE1 47.7 16 0.00035 31.9 2.7 21 213-233 117-137 (156)
140 KOG1625 DNA polymerase alpha-p 44.9 1.9E+02 0.0041 31.0 10.2 107 13-124 358-473 (600)
141 PF13483 Lactamase_B_3: Beta-l 42.5 30 0.00066 29.9 3.6 121 75-226 36-163 (163)
142 PF03490 Varsurf_PPLC: Variant 39.1 24 0.00052 25.4 1.9 27 61-90 12-38 (51)
143 KOG1752 Glutaredoxin and relat 30.0 51 0.0011 27.2 2.8 41 60-102 54-95 (104)
144 COG2047 Uncharacterized protei 29.7 70 0.0015 30.4 3.9 20 29-48 82-101 (258)
145 PTZ00235 DNA polymerase epsilo 28.1 93 0.002 30.5 4.7 43 1-43 28-76 (291)
146 TIGR03768 RPA4764 metallophosp 26.9 1.4E+02 0.003 31.4 5.9 23 209-231 389-412 (492)
147 KOG4419 5' nucleotidase [Nucle 26.5 5.2E+02 0.011 28.0 10.0 31 79-109 125-164 (602)
148 COG0622 Predicted phosphoester 24.6 3.1E+02 0.0068 24.6 7.1 59 166-253 80-138 (172)
149 PF02844 GARS_N: Phosphoribosy 22.8 82 0.0018 25.9 2.7 32 1-38 1-32 (100)
150 TIGR03413 GSH_gloB hydroxyacyl 22.6 1.2E+02 0.0026 28.5 4.2 35 2-39 120-164 (248)
151 PF14529 Exo_endo_phos_2: Endo 22.5 64 0.0014 25.6 2.1 30 12-43 13-42 (119)
152 cd06403 PB1_Par6 The PB1 domai 22.5 4E+02 0.0086 21.2 6.7 42 4-47 15-60 (80)
153 KOG3592 Microtubule-associated 22.4 2.2E+02 0.0048 31.5 6.5 57 61-127 4-67 (934)
154 PF00462 Glutaredoxin: Glutare 20.5 94 0.002 21.9 2.4 12 74-85 48-59 (60)
155 COG5214 POL12 DNA polymerase a 20.3 4.4E+02 0.0095 27.5 7.7 106 13-126 322-440 (581)
No 1
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=100.00 E-value=7.4e-108 Score=782.26 Aligned_cols=353 Identities=57% Similarity=0.970 Sum_probs=334.9
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
|||||.|||||+||.||++|..++++.+.++|+||||||||+.||..|+.+||||+|||+|++|++||+|+.+||+||||
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 99999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHHHH
Q 018289 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK 160 (358)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv~k 160 (358)
||||||+++||+||++||||||||||||.+||++++|+||||+||||+++||+++|+|++||+.+++||+||+|+.||.+
T Consensus 81 IGGNHEAsnyL~eLpyGGwVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~stiRsiYHvR~~dV~~ 160 (456)
T KOG2863|consen 81 IGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNSTIRSIYHVRISDVAK 160 (456)
T ss_pred ecCchHHHHHHHhcccCceeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchhhhhhhhhhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceeeccCCC
Q 018289 161 LMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240 (358)
Q Consensus 161 L~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~~~~ 240 (358)
|+++.+++|||||||||+||..|||..+|+|.||||++|++.+.+||+++.+|+++|||+||||||+|++|+|.+.|+++
T Consensus 161 Lkqlk~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yWfsAHLH~KFaA~v~H~~~ 240 (456)
T KOG2863|consen 161 LKQLKHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYWFSAHLHVKFAALVQHNKR 240 (456)
T ss_pred HHhhcCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchhhhhhHhhHHhhhhcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEccccCCCCCeeEEEeccCCC-CCceeeeChHHHHHHHhhCCCCCCCCCCCCCCCC------CCCcHHHHHHH
Q 018289 241 SPVTKFLALDKCLPRRKFLQVFEIESGQ-GPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGV------QHDMNDCRQWV 313 (358)
Q Consensus 241 ~~~TrFlaL~k~~~~rk~l~a~~i~~~~-~~~~~~~d~~wl~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 313 (358)
.++|+|+|||||+|+|+|+|+++++.++ +++.++||.|||+|+|.|+.+.+.......+|+. -..+++++.|+
T Consensus 241 ~~~tkflaldKclp~~~flqile~~sdp~g~~~~eyd~ewlsi~~~tn~l~~~k~~~~~~p~~~~~r~e~~~~ep~~~~~ 320 (456)
T KOG2863|consen 241 SHVTKFLALDKCLPNRNFLQILEIPSDPRGPMNVEYDNEWLSILRETNFLILVKCRYRNRPNRDLCRLEILEKEPDLSHV 320 (456)
T ss_pred CCCcccccccccCCCcchhhhccCCCCCCCCcccchhhhHHHhhhccchhhhhhhhhhcCCcccchhhhccccCCccchh
Confidence 9999999999999999999999998876 8999999999999999999999999888887653 23567788999
Q ss_pred HHHhhhCCCCCCcceeccCCCCCCCCC-----ccCCCCCChhhhh
Q 018289 314 RSRLQERGAKPFEFVRTVPCYDASQSL-----SIGAFAGNSSEML 353 (358)
Q Consensus 314 ~~~~~~~~~~~~~f~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 353 (358)
...+......|+||.+|+++|+|..+. +.++|+..+++-|
T Consensus 321 ~~k~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~P~~~~f~a~l 365 (456)
T KOG2863|consen 321 SWKDENHLMVPDNFSRTNFVYDPKEPIVQNLHSNNPQTSVFSAEL 365 (456)
T ss_pred hhcchhhhcCCCccccceeeeccccccccccccCCCchhhHHHHH
Confidence 999988888999999999999998772 2335566666655
No 2
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=100.00 E-value=1.8e-72 Score=534.87 Aligned_cols=257 Identities=65% Similarity=1.196 Sum_probs=246.4
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEEc
Q 018289 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (358)
Q Consensus 3 Ilv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI~ 82 (358)
|+|+||+||+++.+|++++.++++++.++|+|||||||+..++.+|+++|+||+||+.+++|++|++|++++|+|||||+
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 79999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHHHHHh
Q 018289 83 GNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLM 162 (358)
Q Consensus 83 GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv~kL~ 162 (358)
||||+++++.++++|||+++||+||++++|++++|+||+|+||+++..+|.+++++..||++++++|+||+|+.++++|.
T Consensus 81 GNHE~~~~l~~l~~gg~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~rs~y~~r~~~~~kl~ 160 (262)
T cd00844 81 GNHEASNYLWELPYGGWVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLK 160 (262)
T ss_pred CCCCCHHHHHhhcCCCeecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHHHHhhhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988788899999999999999999999998
Q ss_pred ccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceeeccCC---
Q 018289 163 QIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGE--- 239 (358)
Q Consensus 163 ~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~~~--- 239 (358)
.+..++||||||+||+||.++++..+|++.||+|++|++.+++||+++++|++++|||||||||+|++|++.++|..
T Consensus 161 ~~~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~gH~H~~f~~~~~~~~~~~ 240 (262)
T cd00844 161 QLKQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVPHENKSP 240 (262)
T ss_pred hcCCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEEecCCcccceecCCccccc
Confidence 88789999999999999999999999999999999999999999999999999999999999999999999887742
Q ss_pred --CCCeeEEEEccccCCCCCee
Q 018289 240 --DSPVTKFLALDKCLPRRKFL 259 (358)
Q Consensus 240 --~~~~TrFlaL~k~~~~rk~l 259 (358)
..+.|||||||||.|+|+||
T Consensus 241 ~~~~~~TRFiaL~k~~~~~~~~ 262 (262)
T cd00844 241 GNTNKETKFLALDKCLPGRDFL 262 (262)
T ss_pred CCCCcceEEEEcccccCCCCCC
Confidence 46799999999999999986
No 3
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=4.8e-40 Score=323.74 Aligned_cols=227 Identities=28% Similarity=0.479 Sum_probs=184.5
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
.||||+||+.|+++.++++|+++++|+| +||+|||+|+|+..+.. ..+|.+|..|.+++|+||||
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~~v~Kk~G-pFd~liCvGnfF~~~~~--------------~~e~~~ykng~~~vPiptY~ 70 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQKVNKKSG-PFDLLICVGNFFGHDTQ--------------NAEVEKYKNGTKKVPIPTYF 70 (528)
T ss_pred ceEEEEcCccccHHHHHHHHHHHhhcCC-CceEEEEecccCCCccc--------------hhHHHHHhcCCccCceeEEE
Confidence 3899999999999999999999999998 99999999999986432 24678999999999999999
Q ss_pred EcCCC-CCchhHHHHhhCCccCCcEEEeCCceEEEE-cCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHH
Q 018289 81 IGGNH-EASNYLWELYYGGWAAPNIYFLGFAGVVKF-GNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDV 158 (358)
Q Consensus 81 I~GNH-E~~~~l~el~~gg~va~NI~yLg~~gv~~i-~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv 158 (358)
.++|. +...|+ +..+|+++|+|++|||+.|+++. .|++||++||.++...+. ..|+..++.++.|- .+
T Consensus 71 ~g~~~~~~~ky~-~n~~g~Ei~~Nlt~Lg~~G~~~l~sGl~IaYLsG~e~~~~~~------~~fs~~dv~~l~~~--~~- 140 (528)
T KOG2476|consen 71 LGDNANETEKYF-ENSDGKEIAENLTYLGRKGTYKLASGLTIAYLSGPESSEKGE------SKFSQADVDELRHR--LD- 140 (528)
T ss_pred ecCCCCccceec-ccCCCcccccceeeecccceEeecCCcEEEEeeccccccccc------cccCHHHHHHHhcc--cc-
Confidence 99997 444554 34479999999999999999988 699999999998643221 13665555555431 11
Q ss_pred HHHhccCCCccEEEeCCCCCCcccC-CcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCC--CCccceee
Q 018289 159 HKLMQIEEPIDIFLSHDWPCGITDY-GNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHL--HCKFAAVV 235 (358)
Q Consensus 159 ~kL~~~~~~vDIlLSHdwP~gI~~~-g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~--H~~f~~~~ 235 (358)
......+||||||.+||.+|... +.. .+.....||..+++|+.+++|||||+|.. |++++|+.
T Consensus 141 --~~~~~~gvDILlTseWP~~v~e~~ss~------------~~~~~~~gs~lvs~La~~lkPRYHFa~~~~v~YErePyr 206 (528)
T KOG2476|consen 141 --TQKEFKGVDILLTSEWPADVQERNSSL------------PESKRLCGSELVSELAAELKPRYHFAGSDGVFYEREPYR 206 (528)
T ss_pred --cccccCCccEEEecCCcchhhhccccC------------ccccCCcchHHHHHHHHhcCcceEeccCCCceeeccccc
Confidence 11335789999999999999874 211 13345789999999999999999999986 77778899
Q ss_pred cc----CCCCCeeEEEEccccCC--CCCeeEEEeccC
Q 018289 236 QH----GEDSPVTKFLALDKCLP--RRKFLQVFEIES 266 (358)
Q Consensus 236 ~~----~~~~~~TrFlaL~k~~~--~rk~l~a~~i~~ 266 (358)
|| .+.+++||||+|+++|+ ++||+|||++.|
T Consensus 207 n~~~~~~~~~h~TRFI~LA~vGN~ek~K~lYAfs~~P 243 (528)
T KOG2476|consen 207 NHAALNEEAGHVTRFIALAKVGNPEKQKWLYAFSLKP 243 (528)
T ss_pred chhhhcccccceeeeeehhhcCCccccceeeeecccc
Confidence 87 56778999999999996 569999999854
No 4
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=100.00 E-value=8.6e-38 Score=274.29 Aligned_cols=144 Identities=30% Similarity=0.540 Sum_probs=124.6
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEEcC
Q 018289 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGG 83 (358)
Q Consensus 4 lv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI~G 83 (358)
||+||+||+++++|++++++++|+| +||++|||||||+.++.. ++|.+|++|.+++|+||||++|
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~g-pFd~~ic~Gdff~~~~~~--------------~~~~~y~~g~~~~pipTyf~gg 65 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKG-PFDALLCVGDFFGDDEDD--------------EELEAYKDGSKKVPIPTYFLGG 65 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccC-CeeEEEEecCccCCccch--------------hhHHHHhcCCccCCCCEEEECC
Confidence 6899999999999999999998887 999999999999987653 5899999999999999999999
Q ss_pred CCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHHHHHhc
Q 018289 84 NHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQ 163 (358)
Q Consensus 84 NHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv~kL~~ 163 (358)
||+
T Consensus 66 n~~----------------------------------------------------------------------------- 68 (150)
T cd07380 66 NNP----------------------------------------------------------------------------- 68 (150)
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 996
Q ss_pred cCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccc--eeeccCC--
Q 018289 164 IEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFA--AVVQHGE-- 239 (358)
Q Consensus 164 ~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~--~~~~~~~-- 239 (358)
++||||||+||.||.++++... +......||+.++++++++|||||||||.|.+|| |+.|+..
T Consensus 69 ---~~DILlTh~wP~gi~~~~~~~~----------~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~Pf~~~~~~~ 135 (150)
T cd07380 69 ---GVDILLTSEWPKGISKLSKVPF----------EETLLICGSDLIAELAKKLKPRYHFAGLEGVFYEREPYRNDSVLE 135 (150)
T ss_pred ---CCCEEECCCCchhhhhhCCCcc----------cccccCCCCHHHHHHHHHcCCCeEeecCCCceEeecCccCCCccc
Confidence 3699999999999987665421 2344679999999999999999999999987765 5777641
Q ss_pred --CCCeeEEEEcccc
Q 018289 240 --DSPVTKFLALDKC 252 (358)
Q Consensus 240 --~~~~TrFlaL~k~ 252 (358)
..++||||+|+++
T Consensus 136 ~~~~~~TRFi~La~~ 150 (150)
T cd07380 136 EKAEHVTRFIGLAPV 150 (150)
T ss_pred cccCcceeEEeccCC
Confidence 3679999999974
No 5
>PF05011 DBR1: Lariat debranching enzyme, C-terminal domain; InterPro: IPR007708 This presumed domain is found at the C terminus of lariat debranching enzyme. This domain is always found in association with a metallo-phosphoesterase domain IPR004843 from INTERPRO. RNA lariat debranching enzyme is capable of digesting a variety of branched nucleic acid substrates and multicopy single-stranded DNAs. The enzyme degrades intron lariat structures during splicing. ; GO: 0016788 hydrolase activity, acting on ester bonds, 0006397 mRNA processing
Probab=99.96 E-value=1.4e-28 Score=214.73 Aligned_cols=120 Identities=34% Similarity=0.535 Sum_probs=95.8
Q ss_pred eccCCCCCeeEEEEccccCCCCCeeEEEeccCCCCC--ceeeeChHHHHHHHhhCCCCCCCCCCCCCCCC-------CCC
Q 018289 235 VQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGP--YEIQYDEEWLAITRTFNSVFPLTSQSANFGGV-------QHD 305 (358)
Q Consensus 235 ~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~~~~~~--~~~~~d~~wl~i~~~~~~~~~~~~~~~~~~~~-------~~~ 305 (358)
|+|+.+++.|||||||||+|+|+|||+++|+..... .+|+||+|||||+|+++++++++.....++.. +..
T Consensus 1 vph~~~~~~TkFLALDKClP~R~FLqviei~~~~~~~~~~L~yD~EWLAI~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (145)
T PF05011_consen 1 VPHEITNKTTKFLALDKCLPRRDFLQVIEIPPDSSSPSPELYYDPEWLAILRATHHLLSLSSDPEYMPPPDEGRWDYRPL 80 (145)
T ss_pred CCCCcCCCccEEEeccccCCCCcceEEEEecCCCCCCCceEEECHHHHHHHHHhhhccccccccccCCCccccccchhhh
Confidence 456667789999999999999999999999876544 89999999999999999999986665554432 345
Q ss_pred cHHHHHHHHHHhhh--CCCCCCcceeccCCCCCCCCCcc---CCCCCChhhhhh
Q 018289 306 MNDCRQWVRSRLQE--RGAKPFEFVRTVPCYDASQSLSI---GAFAGNSSEMLK 354 (358)
Q Consensus 306 ~~~~~~~~~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 354 (358)
+++|++||++++.+ +..+|+||++|||+|+|+.+... ....+.|+|+--
T Consensus 81 i~ee~~~V~e~i~~~~~l~IP~nF~~tap~~~~~~~~~~~~~~~~~~~NPQT~~ 134 (145)
T PF05011_consen 81 IEEELEWVEENIVKKGDLKIPQNFVQTAPPYDPNNPQNRVNEQPKEYPNPQTTE 134 (145)
T ss_pred HHHHHHHHHHHhccCCCceeCcceEECCCCcCcCccccccccCCCCccChHHHH
Confidence 78999999999954 44569999999999999885432 334555666543
No 6
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.90 E-value=6.5e-22 Score=184.45 Aligned_cols=209 Identities=16% Similarity=0.228 Sum_probs=135.5
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
|||+++||+||++.++-+.++.+.+ . .+|++|+|||+...... |. +..+|.+.+ ...++|+++
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~-~--~~D~vv~~GDl~~~g~~--------~~---~~~~~l~~l---~~l~~pv~~ 67 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPE-T--GADAIVLIGNLLPKAAK--------SE---DYAAFFRIL---GEAHLPTFY 67 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhh-c--CCCEEEECCCCCCCCCC--------HH---HHHHHHHHH---HhcCCceEE
Confidence 7999999999999888765554322 2 69999999999875411 11 122333332 345679999
Q ss_pred EcCCCCCc--hhHHHHhhCCccCCcEEEeCCceEEEEcC-EEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhh-hhhH
Q 018289 81 IGGNHEAS--NYLWELYYGGWAAPNIYFLGFAGVVKFGN-IRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYH-VREY 156 (358)
Q Consensus 81 I~GNHE~~--~~l~el~~gg~va~NI~yLg~~gv~~i~G-lrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh-~re~ 156 (358)
|+||||.. .++.+.+....+.|++..|.. +++++.| ++|+|++|.... ...++++++..+-. +.+.
T Consensus 68 V~GNhD~~v~~~l~~~~~~~~~~p~~~~lh~-~~~~~~g~~~~~GlGGs~~~---------~~e~sE~e~~~~~~~~~~~ 137 (224)
T cd07388 68 VPGPQDAPLWEYLREAYNAELVHPEIRNVHE-TFAFWRGPYLVAGVGGEIAD---------EGEPEEHEALRYPAWVAEY 137 (224)
T ss_pred EcCCCChHHHHHHHHHhcccccCccceecCC-CeEEecCCeEEEEecCCcCC---------CCCcCHHHHhhhhhhHHHH
Confidence 99999976 233332222344566666644 5777855 999999998531 12235554210000 0011
Q ss_pred HHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceeec
Q 018289 157 DVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQ 236 (358)
Q Consensus 157 dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~ 236 (358)
-+..+.......||||||.||.|.-- .+.||+++++++++.+|++|+|||+|...+.
T Consensus 138 ~l~~~~~~~~~~~VLv~H~PP~g~g~--------------------~h~GS~alr~~I~~~~P~l~i~GHih~~~~~--- 194 (224)
T cd07388 138 RLKALWELKDYRKVFLFHTPPYHKGL--------------------NEQGSHEVAHLIKTHNPLVVLVGGKGQKHEL--- 194 (224)
T ss_pred HHHHHHhCCCCCeEEEECCCCCCCCC--------------------CccCHHHHHHHHHHhCCCEEEEcCCceeEEE---
Confidence 12234344567999999999999721 2589999999999999999999999944432
Q ss_pred cCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018289 237 HGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (358)
Q Consensus 237 ~~~~~~~TrFlaL~k~~~~rk~l~a~~i~ 265 (358)
-..|..+|-+....+ +.-.+++.
T Consensus 195 ----~g~t~vvNpg~~~~g--~~a~i~~~ 217 (224)
T cd07388 195 ----LGASWVVVPGDLSEG--RYALLDLR 217 (224)
T ss_pred ----eCCEEEECCCcccCC--cEEEEEec
Confidence 235899998885444 33456664
No 7
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.87 E-value=5.5e-21 Score=169.85 Aligned_cols=186 Identities=18% Similarity=0.223 Sum_probs=120.8
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEEc
Q 018289 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (358)
Q Consensus 3 Ilv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI~ 82 (358)
|+++||+||+..++.. ..++ ..++|+||++||+........ |..+ +. .+..++|+++|+
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~---~~~~D~vv~~GDl~~~~~~~~---------~~~~----~~---l~~~~~p~~~v~ 59 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILK---AEEADAVIVAGDITNFGGKEA---------AVEI----NL---LLAIGVPVLAVP 59 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhh---ccCCCEEEECCCccCcCCHHH---------HHHH----HH---HHhcCCCEEEEc
Confidence 7899999999887754 2222 137999999999986543211 1112 23 344678999999
Q ss_pred CCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHHHHHh
Q 018289 83 GNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLM 162 (358)
Q Consensus 83 GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv~kL~ 162 (358)
||||....... ..+++..+. ..++.++|++|.|++|.... .+.. ...++++++..+ ..+.
T Consensus 60 GNHD~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~-~~~~----~~~~~~~~l~~~--------~~l~ 119 (188)
T cd07392 60 GNCDTPEILGL------LTSAGLNLH-GKVVEVGGYTFVGIGGSNPT-PFNT----PIELSEEEIVSD--------GRLN 119 (188)
T ss_pred CCCCCHHHHHh------hhcCcEecC-CCEEEECCEEEEEeCCCCCC-CCCC----ccccCHHHHHHh--------hhhh
Confidence 99998654433 223444443 46677899999999886421 1111 123344443321 1233
Q ss_pred ccCCCccEEEeCCCCCCc-ccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceeeccCCCC
Q 018289 163 QIEEPIDIFLSHDWPCGI-TDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDS 241 (358)
Q Consensus 163 ~~~~~vDIlLSHdwP~gI-~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~~~~~ 241 (358)
+...+.+|++||.||.+. .+... .....|+..+.+++++.+|++|||||.|..+....-
T Consensus 120 ~~~~~~~ilv~H~pp~~~~~d~~~---------------~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~~~~~~----- 179 (188)
T cd07392 120 NLLAKNLILVTHAPPYGTAVDRVS---------------GGFHVGSKAIRKFIEERQPLLCICGHIHESRGVDKI----- 179 (188)
T ss_pred ccCCCCeEEEECCCCcCCcccccC---------------CCCccCCHHHHHHHHHhCCcEEEEeccccccceeee-----
Confidence 445678999999999874 32110 012479999999999999999999999999854221
Q ss_pred CeeEEEEc
Q 018289 242 PVTKFLAL 249 (358)
Q Consensus 242 ~~TrFlaL 249 (358)
..|.+++.
T Consensus 180 ~~~~~~n~ 187 (188)
T cd07392 180 GNTLVVNP 187 (188)
T ss_pred CCeEEecC
Confidence 24777764
No 8
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=99.81 E-value=2.7e-18 Score=158.15 Aligned_cols=209 Identities=22% Similarity=0.290 Sum_probs=138.9
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCcc--ccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQ--AVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~--~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt 78 (358)
|||+.+.|.||+.+.+-+.+..... ..+|+|+++||+. ..++...... ++ .+ +. ++...+|+
T Consensus 4 mkil~vtDlHg~~~~~~k~~~~~~~---~~~D~lviaGDlt~~~~~~~~~~~~--------~~-~~-e~---l~~~~~~v 67 (226)
T COG2129 4 MKILAVTDLHGSEDSLKKLLNAAAD---IRADLLVIAGDLTYFHFGPKEVAEE--------LN-KL-EA---LKELGIPV 67 (226)
T ss_pred ceEEEEeccccchHHHHHHHHHHhh---ccCCEEEEecceehhhcCchHHHHh--------hh-HH-HH---HHhcCCeE
Confidence 8999999999999877665544322 3799999999998 4443322111 00 01 11 34457899
Q ss_pred EEEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHH
Q 018289 79 IFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDV 158 (358)
Q Consensus 79 ~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv 158 (358)
++++||.|.......+...| -|++ ..+++++|+.|.|++|+- +..|.+ ...|+++++.+. +
T Consensus 68 ~avpGNcD~~~v~~~l~~~~---~~v~----~~v~~i~~~~~~G~Ggsn-~tp~nt----~~e~~E~~I~s~-------l 128 (226)
T COG2129 68 LAVPGNCDPPEVIDVLKNAG---VNVH----GRVVEIGGYGFVGFGGSN-PTPFNT----PREFSEDEIYSK-------L 128 (226)
T ss_pred EEEcCCCChHHHHHHHHhcc---cccc----cceEEecCcEEEEecccC-CCCCCC----ccccCHHHHHHH-------H
Confidence 99999999886666655433 2332 378899999999988874 334433 234566666543 2
Q ss_pred HHH-hccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceeecc
Q 018289 159 HKL-MQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQH 237 (358)
Q Consensus 159 ~kL-~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~ 237 (358)
.++ .......-|++||.+|.|...- . | ..-.++||.+++++++++||+.++|||.|+...--.
T Consensus 129 ~~~v~~~~~~~~Il~~HaPP~gt~~d--~-------~-----~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~-- 192 (226)
T COG2129 129 KSLVKKADNPVNILLTHAPPYGTLLD--T-------P-----SGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK-- 192 (226)
T ss_pred HHHHhcccCcceEEEecCCCCCcccc--C-------C-----CCccccchHHHHHHHHHhCCceEEEeeecccccccc--
Confidence 222 2222223399999999997642 1 0 002489999999999999999999999998654322
Q ss_pred CCCCCeeEEEEccccCCCCCeeEEEecc
Q 018289 238 GEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (358)
Q Consensus 238 ~~~~~~TrFlaL~k~~~~rk~l~a~~i~ 265 (358)
...|.|++-+. .++.....+++.
T Consensus 193 ---iG~TivVNPG~--~~~g~yA~i~l~ 215 (226)
T COG2129 193 ---IGNTIVVNPGP--LGEGRYALIELE 215 (226)
T ss_pred ---cCCeEEECCCC--ccCceEEEEEec
Confidence 23699999988 344445555554
No 9
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=99.72 E-value=1.5e-16 Score=146.69 Aligned_cols=211 Identities=18% Similarity=0.278 Sum_probs=124.2
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcc-hhh----hccchhh--------hH--hhhHHHH
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNEN-DME----SLNVPRK--------YR--EMKSFWK 66 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~-dl~----~~~~p~k--------~~--~l~~F~~ 66 (358)
|||.++|.||+++.+-+.+..+.++ .+|+|+.+||+-...... |.. .-..|+| |. .+..|.+
T Consensus 7 kilA~s~~~g~~e~l~~l~~~~~e~---~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~ 83 (255)
T PF14582_consen 7 KILAISNFRGDFELLERLVEVIPEK---GPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFR 83 (255)
T ss_dssp EEEEEE--TT-HHHHHHHHHHHHHH---T-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHH
T ss_pred hheeecCcchHHHHHHHHHhhcccc---CCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHH
Confidence 7999999999999998888877776 599999999995432111 111 0011211 11 1334555
Q ss_pred HhcCCCCCCccEEEEcCCCCCc--hhHHHHhhCCccCCcEEEeCCceEEEEcC-EEEEEEeCccCCccCCCCCCCCCCCC
Q 018289 67 YYSGQEVAPIPTIFIGGNHEAS--NYLWELYYGGWAAPNIYFLGFAGVVKFGN-IRIGGLSGIYNARHYRLGHYERPPYN 143 (358)
Q Consensus 67 y~~g~~~~pvpt~fI~GNHE~~--~~l~el~~gg~va~NI~yLg~~gv~~i~G-lrIaGlsGi~~~~~y~~~~~e~~Py~ 143 (358)
. +..+++||++||||||++ .++.+.+...-+.||++-+ +.+++.++| +-|+|+||............-++|+.
T Consensus 84 ~---L~~~~~p~~~vPG~~Dap~~~~lr~a~~~e~v~p~~~~v-H~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP~w 159 (255)
T PF14582_consen 84 I---LGELGVPVFVVPGNMDAPERFFLREAYNAEIVTPHIHNV-HESFFFWKGEYLVAGMGGEITDDQREEEFKLRYPAW 159 (255)
T ss_dssp H---HHCC-SEEEEE--TTS-SHHHHHHHHHHCCCC-TTEEE--CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEEHH
T ss_pred H---HHhcCCcEEEecCCCCchHHHHHHHHhccceeccceeee-eeeecccCCcEEEEecCccccCCCccccccccchHH
Confidence 5 456899999999999996 6677777777889999866 567778887 99999999886443222111234432
Q ss_pred hhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEE
Q 018289 144 ESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWF 223 (358)
Q Consensus 144 ~~~~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywf 223 (358)
+ . ++.++.|..++..--|||.|.+|. .++ ...+.||..+++++++.+|...+
T Consensus 160 e----a-----ey~lk~l~elk~~r~IlLfhtpPd----~~k---------------g~~h~GS~~V~dlIk~~~P~ivl 211 (255)
T PF14582_consen 160 E----A-----EYSLKFLRELKDYRKILLFHTPPD----LHK---------------GLIHVGSAAVRDLIKTYNPDIVL 211 (255)
T ss_dssp H----H-----HHHHGGGGGCTSSEEEEEESS-BT----BCT---------------CTBTTSBHHHHHHHHHH--SEEE
T ss_pred H----H-----HHHHHHHHhcccccEEEEEecCCc----cCC---------------CcccccHHHHHHHHHhcCCcEEE
Confidence 1 1 222333444556678999999991 111 12579999999999999999999
Q ss_pred EcCCCCccceeeccCCCCCeeEEEEcccc
Q 018289 224 SAHLHCKFAAVVQHGEDSPVTKFLALDKC 252 (358)
Q Consensus 224 sGH~H~~f~~~~~~~~~~~~TrFlaL~k~ 252 (358)
|||.|.+.+.-.- ..|-.++-+..
T Consensus 212 ~Ghihe~~~~e~l-----G~TlVVNPGsL 235 (255)
T PF14582_consen 212 CGHIHESHGKESL-----GKTLVVNPGSL 235 (255)
T ss_dssp E-SSS-EE--EEE-----TTEEEEE--BG
T ss_pred ecccccchhhHHh-----CCEEEecCccc
Confidence 9999998844322 13666666654
No 10
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.62 E-value=6.9e-15 Score=138.21 Aligned_cols=209 Identities=19% Similarity=0.219 Sum_probs=117.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
+||+++||+||+..... ++.+++ .++|+++++||+... .. ++.+.+ .+.+.|+++
T Consensus 1 ~rIa~isDiHg~~~~~~--~~~l~~---~~pD~Vl~~GDi~~~-~~----------------~~~~~l---~~l~~p~~~ 55 (238)
T cd07397 1 LRIAIVGDVHGQWDLED--IKALHL---LQPDLVLFVGDFGNE-SV----------------QLVRAI---SSLPLPKAV 55 (238)
T ss_pred CEEEEEecCCCCchHHH--HHHHhc---cCCCEEEECCCCCcC-hH----------------HHHHHH---HhCCCCeEE
Confidence 59999999999976522 233332 268999999999632 11 122332 234678999
Q ss_pred EcCCCCCchh------HHHHhhCCccCCcEEEeCCceEEEEc--CEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhh
Q 018289 81 IGGNHEASNY------LWELYYGGWAAPNIYFLGFAGVVKFG--NIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYH 152 (358)
Q Consensus 81 I~GNHE~~~~------l~el~~gg~va~NI~yLg~~gv~~i~--GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh 152 (358)
|.||||.... ...+...=... ++.+++. +.+++. ++.|.|.=|-..+..+ -.+...+|..|.
T Consensus 56 V~GNHD~~~~~~~~~k~~~l~~~L~~l-g~~~l~~-~~~~~~~~~~~vvG~R~~~~~g~~--------~~~~~~vr~~fg 125 (238)
T cd07397 56 ILGNHDAWYDATFRKKGDRVQEQLELL-GDLHCGW-GRLDFPPLPLSVVGGRPFSAGGGF--------WLSKKAVKAVYG 125 (238)
T ss_pred EcCCCcccccccccchHHHHHHHHHHh-CCcEEee-cccccCCCCeEEEeeCCccCCCcc--------ccCHHHHHHHhC
Confidence 9999996321 11111000011 1122222 223443 5666664433222211 123446777775
Q ss_pred hhhHH--H----HHHhc-cCCCccEEEeCCCCCCcccCCcchhhhhhccchhhc-ccCCCCCcHHHHHHHHHhC----CC
Q 018289 153 VREYD--V----HKLMQ-IEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKE-IQDGTLGSEPAAQLLEKLK----PS 220 (358)
Q Consensus 153 ~re~d--v----~kL~~-~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~-i~~~~lGS~~l~~ll~~lk----Pr 220 (358)
+..++ + +.+.. .....+|||||..|.|.-+..+. +.=++- ...+..|++-+++.+..++ |+
T Consensus 126 i~s~~eA~~~ive~~~~~~~~~~~VliaH~~~~G~g~~~~~-------~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~ 198 (238)
T cd07397 126 VISLEESAQRIIAAAKKAPPDLPLILLAHNGPSGLGSDAED-------PCGRDWKPPGGDWGDPDLALAISQIQQGRQVP 198 (238)
T ss_pred CCCHHHHHHHHHHHhhhcCCCCCeEEEeCcCCcCCCccccc-------ccccccCCcCCCCCCHHHHHHHHHHhccCCCC
Confidence 44333 2 22211 23457999999999998542110 000000 0135789999999999888 89
Q ss_pred EEEEcCCCCc--cceee---ccCCCCCeeEEEEcccc
Q 018289 221 YWFSAHLHCK--FAAVV---QHGEDSPVTKFLALDKC 252 (358)
Q Consensus 221 ywfsGH~H~~--f~~~~---~~~~~~~~TrFlaL~k~ 252 (358)
|+++||+|.. +..-. -+ .+...|.|||-+.+
T Consensus 199 l~~fGH~H~~l~~~~~~r~~~~-~~~~gt~y~N~a~~ 234 (238)
T cd07397 199 LVVFGHMHHRLRRGKGLRNMIA-VDREGTVYLNAASV 234 (238)
T ss_pred EEEeCCccCcccccccccceee-ecCCCeEEEecccc
Confidence 9999999988 44310 00 11246999998875
No 11
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.57 E-value=3.5e-14 Score=121.45 Aligned_cols=134 Identities=23% Similarity=0.367 Sum_probs=93.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCcc-EEE
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIP-TIF 80 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvp-t~f 80 (358)
||+++||+||... .+ ...++|++|+|||+....... +...+.+++... +.+ +++
T Consensus 1 ~i~~isD~H~~~~----~~------~~~~~D~vi~~GD~~~~~~~~------------~~~~~~~~l~~~---~~~~~~~ 55 (135)
T cd07379 1 RFVCISDTHSRHR----TI------SIPDGDVLIHAGDLTERGTLE------------ELQKFLDWLKSL---PHPHKIV 55 (135)
T ss_pred CEEEEeCCCCCCC----cC------cCCCCCEEEECCCCCCCCCHH------------HHHHHHHHHHhC---CCCeEEE
Confidence 6999999999976 11 113699999999997543221 223344554332 333 578
Q ss_pred EcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHHHH
Q 018289 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK 160 (358)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv~k 160 (358)
|.||||....
T Consensus 56 v~GNHD~~~~---------------------------------------------------------------------- 65 (135)
T cd07379 56 IAGNHDLTLD---------------------------------------------------------------------- 65 (135)
T ss_pred EECCCCCcCC----------------------------------------------------------------------
Confidence 9999983200
Q ss_pred HhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceeeccCCC
Q 018289 161 LMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240 (358)
Q Consensus 161 L~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~~~~ 240 (358)
...++|++||.+|.++.++... ....|+..+.+++++.+|+++|+||.|..+.....+ ..
T Consensus 66 ----~~~~~ilv~H~~p~~~~~~~~~---------------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~-~~ 125 (135)
T cd07379 66 ----PEDTDILVTHGPPYGHLDLVSS---------------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAERVL-DT 125 (135)
T ss_pred ----CCCCEEEEECCCCCcCcccccc---------------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCceeEec-cc
Confidence 0246899999999987654321 246899999999999999999999999998664213 22
Q ss_pred CCeeEEEEcc
Q 018289 241 SPVTKFLALD 250 (358)
Q Consensus 241 ~~~TrFlaL~ 250 (358)
...|.+++.+
T Consensus 126 ~~~t~~in~~ 135 (135)
T cd07379 126 DGETLFVNAS 135 (135)
T ss_pred CCCEEEEeCC
Confidence 3468888753
No 12
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.49 E-value=7.4e-13 Score=123.98 Aligned_cols=208 Identities=22% Similarity=0.234 Sum_probs=113.0
Q ss_pred EEEEEcCCCCChH-----H-HHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCC
Q 018289 2 RIAVEGCMHGELD-----N-VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAP 75 (358)
Q Consensus 2 kIlv~GD~HG~ld-----~-i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~p 75 (358)
||++++|+|++.. . +.+.++.+++. ++|+||++||+..... ..+..+..+.+. .+
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~---~~d~vv~~GDl~~~~~----------~~~~~~~~l~~~------~~ 61 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ---KIDHLHIAGDISNDFQ----------RSLPFIEKLQEL------KG 61 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc---CCCEEEECCccccchh----------hHHHHHHHHHHh------cC
Confidence 7999999997631 1 22333334332 6999999999985321 111122222221 35
Q ss_pred ccEEEEcCCCCCc-h-hHHHHhhCCccCCcEEEeCCceEE-EEcCEEEEEEeCccCCccCCC----------------CC
Q 018289 76 IPTIFIGGNHEAS-N-YLWELYYGGWAAPNIYFLGFAGVV-KFGNIRIGGLSGIYNARHYRL----------------GH 136 (358)
Q Consensus 76 vpt~fI~GNHE~~-~-~l~el~~gg~va~NI~yLg~~gv~-~i~GlrIaGlsGi~~~~~y~~----------------~~ 136 (358)
+|+++|+||||.. . ...++.. .. ++.+|....+. ..+++||.|+.|.+.. .+.. ..
T Consensus 62 ~pv~~v~GNHD~~~~~~~~~~~~--~~--~~~~l~~~~~~~~~~~~~~ig~~gw~d~-~~~~~~~~~~~~~~~~d~~~~~ 136 (239)
T TIGR03729 62 IKVTFNAGNHDMLKDLTYEEIES--ND--SPLYLHNRFIDIPNTQWRIIGNNGWYDY-SFSNDKTSKEILRWKKSFWFDR 136 (239)
T ss_pred CcEEEECCCCCCCCCCCHHHHHh--cc--chhhhcccccccCCCceEEEeeccceec-ccccccCHHHHHHhhhcEEeec
Confidence 7999999999963 1 1122211 01 34455544432 2388999999986531 1100 00
Q ss_pred CCCCCCChhhHhhhhhhhhHH-H-HHHhccCCCccEEEeCCCCCCccc-CCcchhhhhhccchhhcccCCCCCcHHHHHH
Q 018289 137 YERPPYNESTIRSVYHVREYD-V-HKLMQIEEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLGSEPAAQL 213 (358)
Q Consensus 137 ~e~~Py~~~~~~s~yh~re~d-v-~kL~~~~~~vDIlLSHdwP~gI~~-~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~l 213 (358)
....|..... + +-++.+ + +.|.+...+.-|++||-+|....- .+.. .+.+ +......||..+.++
T Consensus 137 ~~~~~~~~~~---~-~~~~l~~l~~~l~~~~~~~~ivvtH~pP~~~~~~~~~~------~~~~--~~~~~~~~s~~l~~l 204 (239)
T TIGR03729 137 RIKRPMSDPE---R-TAIVLKQLKKQLNQLDNKQVIFVTHFVPHRDFIYVPMD------HRRF--DMFNAFLGSQHFGQL 204 (239)
T ss_pred ccCCCCChHH---H-HHHHHHHHHHHHHhcCCCCEEEEEcccchHHHhcCCCC------Ccch--hhhhhccChHHHHHH
Confidence 0011222211 1 111111 1 123334446689999999965211 0000 0001 011235789999999
Q ss_pred HHHhCCCEEEEcCCCCccceeeccCCCCCeeEEEEcc
Q 018289 214 LEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALD 250 (358)
Q Consensus 214 l~~lkPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~ 250 (358)
+++.+|+.|+|||.|..+..... ..||+++-.
T Consensus 205 i~~~~v~~~i~GH~H~~~~~~~i-----~~~~~~~~~ 236 (239)
T TIGR03729 205 LVKYEIKDVIFGHLHRRFGPLTI-----GGTTYHNRP 236 (239)
T ss_pred HHHhCCCEEEECCccCCCCCEEE-----CCEEEEecC
Confidence 99999999999999999853321 258888643
No 13
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.47 E-value=3e-12 Score=118.72 Aligned_cols=196 Identities=16% Similarity=0.202 Sum_probs=114.4
Q ss_pred EEEEEcCCCCC------------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhc
Q 018289 2 RIAVEGCMHGE------------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (358)
Q Consensus 2 kIlv~GD~HG~------------ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~ 69 (358)
||++++|+|=. ...+.+.++.+++... ++|+||++||+....+.. .|+. |.+.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~-~~d~vi~~GDl~~~~~~~---------~~~~---~~~~l- 66 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHP-RPDLVLVTGDLTDDGSPE---------SYER---LRELL- 66 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCC-CCCEEEECccCCCCCCHH---------HHHH---HHHHH-
Confidence 79999999943 2234444555544432 799999999998654321 2222 33332
Q ss_pred CCCCCCccEEEEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhh
Q 018289 70 GQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRS 149 (358)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s 149 (358)
.+.++|+++|+||||......+.. +.+-..+ -.....+.++|++|.++.+...... ...+++++++-
T Consensus 67 --~~~~~p~~~v~GNHD~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~i~lds~~~~~~-------~~~~~~~ql~w 133 (240)
T cd07402 67 --AALPIPVYLLPGNHDDRAAMRAVF-PELPPAP---GFVQYVVDLGGWRLILLDSSVPGQH-------GGELCAAQLDW 133 (240)
T ss_pred --hhcCCCEEEeCCCCCCHHHHHHhh-ccccccc---cccceeEecCCEEEEEEeCCCCCCc-------CCEECHHHHHH
Confidence 234789999999999864433322 2110000 0112356779999999976542110 01122222221
Q ss_pred hhhhhhHHHHHHhccCCCccEEEeCCCCCCccc-CCcchhhhhhccchhhcccCCCCCcHHHHHHHHHh-CCCEEEEcCC
Q 018289 150 VYHVREYDVHKLMQIEEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHL 227 (358)
Q Consensus 150 ~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~-~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~l-kPrywfsGH~ 227 (358)
+ .+.|.+.....-|+++|.+|..... ..+ .....++..+.+++.+. +++++|+||.
T Consensus 134 L-------~~~L~~~~~~~~il~~H~pp~~~~~~~~~---------------~~~~~~~~~~~~~l~~~~~v~~v~~GH~ 191 (240)
T cd07402 134 L-------EAALAEAPDKPTLVFLHHPPFPVGIAWMD---------------AIGLRNAEALAAVLARHPNVRAILCGHV 191 (240)
T ss_pred H-------HHHHHhCCCCCEEEEECCCCccCCchhhh---------------hhhCCCHHHHHHHHhcCCCeeEEEECCc
Confidence 1 1123333446789999999977532 111 01234577888999998 8999999999
Q ss_pred CCccceeeccCCCCCeeEEEEcccc
Q 018289 228 HCKFAAVVQHGEDSPVTKFLALDKC 252 (358)
Q Consensus 228 H~~f~~~~~~~~~~~~TrFlaL~k~ 252 (358)
|..+...+. .+.++..+..
T Consensus 192 H~~~~~~~~------g~~~~~~gs~ 210 (240)
T cd07402 192 HRPIDGSWG------GIPLLTAPST 210 (240)
T ss_pred CchHHeEEC------CEEEEEcCcc
Confidence 997655442 3566655553
No 14
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.46 E-value=4e-13 Score=112.47 Aligned_cols=189 Identities=22% Similarity=0.303 Sum_probs=98.0
Q ss_pred CEEEEEcCCCCChHHH---HHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCcc
Q 018289 1 MRIAVEGCMHGELDNV---YKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIP 77 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i---~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvp 77 (358)
|||+++||+|+..... ...+.....+ .+.|+||++||+.......+... ..+. ........++|
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~--~~~d~ii~~GD~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~ 67 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAE--NKPDFIIFLGDLVDGGNPSEEWR----------AQFW-FFIRLLNPKIP 67 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHH--TTTSEEEEESTSSSSSSHHHHHH----------HHHH-HHHHHHHTTTT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhcc--CCCCEEEeeccccccccccccch----------hhhc-cchhhhhcccc
Confidence 8999999999998766 3333333333 37999999999987655433211 1110 01112336789
Q ss_pred EEEEcCCCCCchhHHHHhh-----CC-ccCCcEEEeCCce-EE-EEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhh
Q 018289 78 TIFIGGNHEASNYLWELYY-----GG-WAAPNIYFLGFAG-VV-KFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRS 149 (358)
Q Consensus 78 t~fI~GNHE~~~~l~el~~-----gg-~va~NI~yLg~~g-v~-~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s 149 (358)
++++.||||.......... .. ....+..+....+ .. ...........+.. ..........
T Consensus 68 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ 135 (200)
T PF00149_consen 68 VYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEY------------PDYGMEAQQE 135 (200)
T ss_dssp EEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHT------------HHSEHHHHHH
T ss_pred ccccccccccceeccccccccccccccccccccccccCcceeeecccccccccccccc------------cccccccchh
Confidence 9999999998854322211 00 0111111111001 00 01111111111100 0000000000
Q ss_pred hhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCC
Q 018289 150 VYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHC 229 (358)
Q Consensus 150 ~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~ 229 (358)
........+..-..+..|+++|.+|.......... .....++..+..+++..+++++|+||.|.
T Consensus 136 ---~~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 136 ---WWLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSY-------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp ---HHHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHH-------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred ---cccccccccccccccceeEEEecCCCCcccccccc-------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 01111112223345789999999999875533210 01134567899999999999999999997
Q ss_pred c
Q 018289 230 K 230 (358)
Q Consensus 230 ~ 230 (358)
.
T Consensus 200 ~ 200 (200)
T PF00149_consen 200 Y 200 (200)
T ss_dssp E
T ss_pred C
Confidence 3
No 15
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=99.46 E-value=5.9e-13 Score=125.60 Aligned_cols=207 Identities=23% Similarity=0.329 Sum_probs=134.1
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCcc-EEE
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIP-TIF 80 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvp-t~f 80 (358)
|..+++|+|+....+- .+ ..-|.+|.+|||....-.. ++..|-+++ -..|.- -++
T Consensus 63 r~VcisdtH~~~~~i~-~~--------p~gDvlihagdfT~~g~~~------------ev~~fn~~~---gslph~yKIV 118 (305)
T KOG3947|consen 63 RFVCISDTHELTFDIN-DI--------PDGDVLIHAGDFTNLGLPE------------EVIKFNEWL---GSLPHEYKIV 118 (305)
T ss_pred EEEEecCcccccCccc-cC--------CCCceEEeccCCccccCHH------------HHHhhhHHh---ccCcceeeEE
Confidence 6789999999766554 11 3679999999998754332 334455543 223433 589
Q ss_pred EcCCCCCc---hhHH---H-----Hh-----------hCC--ccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCC
Q 018289 81 IGGNHEAS---NYLW---E-----LY-----------YGG--WAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGH 136 (358)
Q Consensus 81 I~GNHE~~---~~l~---e-----l~-----------~gg--~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~ 136 (358)
|.||||.. +.+. + ++ ++| -+-.|+.||.+.++ ++.|+||.|.+.. +.
T Consensus 119 IaGNHELtFd~ef~~~~~k~~~~~~~~p~~s~l~P~a~egv~~lLTN~iYLqD~~v-tv~G~~Iygspw~--p~------ 189 (305)
T KOG3947|consen 119 IAGNHELTFDHEFMADLIKDEQDAYYFPGVSKLKPEAYEGVQSLLTNCIYLQDSEV-TVRGVRIYGSPWT--PL------ 189 (305)
T ss_pred EeeccceeecccccchhhccccceecCccccccCccccccccchhceeEEEecCcE-EEEEEEEecCCCC--cc------
Confidence 99999875 1111 1 00 111 24568899998884 7788999875432 10
Q ss_pred CCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHH-HHHHHH
Q 018289 137 YERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEP-AAQLLE 215 (358)
Q Consensus 137 ~e~~Py~~~~~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~-l~~ll~ 215 (358)
+-.++|+.. .++...++..++...+|||+||.+|.| ++|..+ -| +....|+.. +..+-.
T Consensus 190 ~~g~~f~l~-------rg~~~ld~W~~ip~~iDvL~tHtPPlG---~gd~~~------~~----~gqr~GC~ell~tVe~ 249 (305)
T KOG3947|consen 190 LPGWAFNLP-------RGQSLLDKWNQIPGGIDVLITHTPPLG---HGDLVP------VF----SGQRNGCVELLNTVER 249 (305)
T ss_pred cCchhhhhh-------hhHhhhHHHhcCccccceeccCCCCCC---cchhcc------cc----cCcccCHHHHHHhHhh
Confidence 012223211 234556788899999999999999999 444321 01 234688764 555666
Q ss_pred HhCCCEEEEcCCCCccceeeccCCCCCeeEEEEccccCC----CCCeeEEEeccCC
Q 018289 216 KLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLP----RRKFLQVFEIESG 267 (358)
Q Consensus 216 ~lkPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~~----~rk~l~a~~i~~~ 267 (358)
++||+||++||.|..|..+-. ..|+|++-.-|.- ..+=+ +|+|+..
T Consensus 250 rvqpk~hVfGhvhe~~Gvta~-----G~t~fina~~C~~~~~~t~~pi-lfdip~~ 299 (305)
T KOG3947|consen 250 RVQPKYHVFGHVHEGHGVTAD-----GYTTFINAELCNINLRPTNKPI-LFDIPKP 299 (305)
T ss_pred ccccceEEeeeeecCceeeec-----CccccccHHHhhhccccCCCCe-EEeCCCC
Confidence 699999999999999988764 3699998888862 22223 7777643
No 16
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.38 E-value=3.6e-12 Score=112.42 Aligned_cols=153 Identities=18% Similarity=0.169 Sum_probs=89.1
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEEc
Q 018289 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (358)
Q Consensus 3 Ilv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI~ 82 (358)
|+++||+|++.......+. ......++|+||++||++....... +..+ ......+.|+++|.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~--~~~~~~~~d~li~~GDi~~~~~~~~---------------~~~~-~~~~~~~~~v~~v~ 62 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLL--NFPIAPDADILVLAGDIGYLTDAPR---------------FAPL-LLALKGFEPVIYVP 62 (166)
T ss_pred CceEccccccCcccccccc--ccCCCCCCCEEEECCCCCCCcchHH---------------HHHH-HHhhcCCccEEEeC
Confidence 6899999998765433221 1112237999999999986432211 1111 11234578999999
Q ss_pred CCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHHHHHh
Q 018289 83 GNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLM 162 (358)
Q Consensus 83 GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv~kL~ 162 (358)
||||.. ++|.|..+-+. + .+++++. ++...
T Consensus 63 GNHD~~-----------------------------~~~~G~~~w~~---~-------~~~~~~~-----------~~~~~ 92 (166)
T cd07404 63 GNHEFY-----------------------------VRIIGTTLWSD---I-------SLFGEAA-----------ARMRM 92 (166)
T ss_pred CCcceE-----------------------------EEEEeeecccc---c-------CccchHH-----------HHhCC
Confidence 999854 45555542111 1 1122211 22222
Q ss_pred ccCCCccEEEeCCCCCCcccCC-cchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceee
Q 018289 163 QIEEPIDIFLSHDWPCGITDYG-NCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVV 235 (358)
Q Consensus 163 ~~~~~vDIlLSHdwP~gI~~~g-~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~ 235 (358)
.-..+..|++||-+|....... +.. ......++..+.+++++.++++|||||.|.......
T Consensus 93 ~d~~~~~vv~~HhpP~~~~~~~~~~~------------~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~~~ 154 (166)
T cd07404 93 NDFRGKTVVVTHHAPSPLSLAPQYGD------------SLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDYRI 154 (166)
T ss_pred CCCCCCEEEEeCCCCCccccCccccC------------CCcchhhhhccHhHHhhcCCCEEEECCccccceEEE
Confidence 2223578999999997653210 100 000124556678888889999999999999975543
No 17
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.30 E-value=1.8e-11 Score=104.70 Aligned_cols=67 Identities=21% Similarity=0.356 Sum_probs=48.9
Q ss_pred ccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceeeccCCCCCeeEEE
Q 018289 168 IDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFL 247 (358)
Q Consensus 168 vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~~~~~~~TrFl 247 (358)
++|+++|.||.++....+ ....|+..+.+++.+.+|+++++||.|..+..... ...-..|+++
T Consensus 57 ~~Ilv~H~pp~~~~~~~~----------------~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~~~-~~~~~~t~~~ 119 (129)
T cd07403 57 VDILLTHAPPAGIGDGED----------------FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQLR-IRRVGDTTVI 119 (129)
T ss_pred cCEEEECCCCCcCcCccc----------------ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcccc-ccccCCEEEE
Confidence 388999999987654211 13468899999999999999999999988875510 0112369998
Q ss_pred Eccc
Q 018289 248 ALDK 251 (358)
Q Consensus 248 aL~k 251 (358)
+.+-
T Consensus 120 n~~~ 123 (129)
T cd07403 120 NAYG 123 (129)
T ss_pred eCCc
Confidence 7664
No 18
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.30 E-value=3.9e-11 Score=103.31 Aligned_cols=150 Identities=20% Similarity=0.263 Sum_probs=90.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
|||+++||+|++.+++-+.++.+ + ++|.+|++||+... .++.+.++. . ++++
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~---~--~~d~vi~~GDi~~~------------------~~~~~~~~~---~--~~~~ 52 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI---N--EPDFVIILGDIFDP------------------EEVLELLRD---I--PVYV 52 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH---T--TESEEEEES-SCSH------------------HHHHHHHHH---H--EEEE
T ss_pred CEEEEEeCCCCChhHHHHHHHHh---c--CCCEEEECCCchhH------------------HHHHHHHhc---C--CEEE
Confidence 99999999999998866655554 2 59999999998652 122333322 2 7999
Q ss_pred EcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHHHH
Q 018289 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK 160 (358)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv~k 160 (358)
|.||||...+- +.. ..+. +...-..+
T Consensus 53 v~GNHD~~~~~-~~~-~~~~------~~~~~~~~---------------------------------------------- 78 (156)
T PF12850_consen 53 VRGNHDNWAFP-NEN-DEEY------LLDALRLT---------------------------------------------- 78 (156)
T ss_dssp E--CCHSTHHH-SEE-CTCS------SHSEEEEE----------------------------------------------
T ss_pred EeCCcccccch-hhh-hccc------cccceeee----------------------------------------------
Confidence 99999965411 100 0000 00000000
Q ss_pred HhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceeeccCCC
Q 018289 161 LMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240 (358)
Q Consensus 161 L~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~~~~ 240 (358)
.....|+++|.-|..+. .+...+.+++...+++++|+||.|..+.....
T Consensus 79 ----~~~~~i~~~H~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~~---- 127 (156)
T PF12850_consen 79 ----IDGFKILLSHGHPYDVQ-----------------------WDPAELREILSRENVDLVLHGHTHRPQVFKIG---- 127 (156)
T ss_dssp ----ETTEEEEEESSTSSSST-----------------------TTHHHHHHHHHHTTSSEEEESSSSSEEEEEET----
T ss_pred ----ecCCeEEEECCCCcccc-----------------------cChhhhhhhhcccCCCEEEcCCcccceEEEEC----
Confidence 13568888998776643 12345678888999999999999998875532
Q ss_pred CCeeEEEEccccCCC----CCeeEEEecc
Q 018289 241 SPVTKFLALDKCLPR----RKFLQVFEIE 265 (358)
Q Consensus 241 ~~~TrFlaL~k~~~~----rk~l~a~~i~ 265 (358)
.+.+++.+.+... ++-+-+++++
T Consensus 128 --~~~~~~~Gs~~~~~~~~~~~~~i~~~~ 154 (156)
T PF12850_consen 128 --GIHVINPGSIGGPRHGDQSGYAILDIE 154 (156)
T ss_dssp --TEEEEEE-GSSS-SSSSSEEEEEEEET
T ss_pred --CEEEEECCcCCCCCCCCCCEEEEEEEe
Confidence 4899999887631 3444455543
No 19
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.22 E-value=1.1e-09 Score=104.67 Aligned_cols=182 Identities=17% Similarity=0.205 Sum_probs=97.3
Q ss_pred CEEEEEcCCCC-C-----------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHh
Q 018289 1 MRIAVEGCMHG-E-----------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (358)
Q Consensus 1 MkIlv~GD~HG-~-----------ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~ 68 (358)
|||+.++|+|= . .+.+-+.++.+++.. .++|+||++||+...... ..| ..|.+.+
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~-~~~D~vvitGDl~~~~~~---------~~~---~~~~~~l 81 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQ-HEFDLIVATGDLAQDHSS---------EAY---QHFAEGI 81 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhC-CCCCEEEECCCCCCCCCH---------HHH---HHHHHHH
Confidence 79999999992 1 233444455554432 369999999999764322 122 2333443
Q ss_pred cCCCCCCccEEEEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHh
Q 018289 69 SGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIR 148 (358)
Q Consensus 69 ~g~~~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~ 148 (358)
.+.++|+|+|+||||....+.+......+.++ ..++.-++.++.++........ .-.+..+++.
T Consensus 82 ---~~l~~Pv~~v~GNHD~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~Lds~~~g~~-------~G~l~~~ql~ 145 (275)
T PRK11148 82 ---APLRKPCVWLPGNHDFQPAMYSALQDAGISPA------KHVLIGEHWQILLLDSQVFGVP-------HGELSEYQLE 145 (275)
T ss_pred ---hhcCCcEEEeCCCCCChHHHHHHHhhcCCCcc------ceEEecCCEEEEEecCCCCCCc-------CCEeCHHHHH
Confidence 34578999999999985444333211111111 1122235678877765432110 0112233222
Q ss_pred hhhhhhhHHHHHHhccCCCccEEEeCCCCC--CcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHh-CCCEEEEc
Q 018289 149 SVYHVREYDVHKLMQIEEPIDIFLSHDWPC--GITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSA 225 (358)
Q Consensus 149 s~yh~re~dv~kL~~~~~~vDIlLSHdwP~--gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~l-kPrywfsG 225 (358)
-+ -+.|.+...+.-|++.|-.|- +.. ..+. .....+..+.+++++. +.+.+|||
T Consensus 146 wL-------~~~L~~~~~~~~vv~~hH~P~~~~~~-~~d~---------------~~l~n~~~l~~ll~~~~~v~~vl~G 202 (275)
T PRK11148 146 WL-------ERKLADAPERHTLVLLHHHPLPAGCA-WLDQ---------------HSLRNAHELAEVLAKFPNVKAILCG 202 (275)
T ss_pred HH-------HHHHhhCCCCCeEEEEcCCCCCCCcc-hhhc---------------cCCCCHHHHHHHHhcCCCceEEEec
Confidence 11 112333333333454554443 221 1110 0123567789999887 78999999
Q ss_pred CCCCcccee
Q 018289 226 HLHCKFAAV 234 (358)
Q Consensus 226 H~H~~f~~~ 234 (358)
|.|..+...
T Consensus 203 H~H~~~~~~ 211 (275)
T PRK11148 203 HIHQELDLD 211 (275)
T ss_pred ccChHHhce
Confidence 999987543
No 20
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.20 E-value=7.7e-10 Score=96.21 Aligned_cols=59 Identities=27% Similarity=0.413 Sum_probs=42.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEE
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI 81 (358)
||+++||+||+.+.+.+.++.+ . ++|.+|+|||+........ .....++++|
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~----~-~~d~ii~~GD~~~~~~~~~-----------------------~~~~~~~~~V 52 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELF----G-DVDLIIHAGDVLYPGPLNE-----------------------LELKAPVIAV 52 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHh----c-CCCEEEECCccccccccch-----------------------hhcCCcEEEE
Confidence 6999999999987666555443 1 3899999999876432110 1234578999
Q ss_pred cCCCCCc
Q 018289 82 GGNHEAS 88 (358)
Q Consensus 82 ~GNHE~~ 88 (358)
.||||..
T Consensus 53 ~GNhD~~ 59 (155)
T cd00841 53 RGNCDGE 59 (155)
T ss_pred eCCCCCc
Confidence 9999965
No 21
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.16 E-value=1.6e-09 Score=101.29 Aligned_cols=180 Identities=22% Similarity=0.241 Sum_probs=93.6
Q ss_pred EEEEcCCCCCh---------H----HHHHHHHHH-HHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHh
Q 018289 3 IAVEGCMHGEL---------D----NVYKTLQYM-ENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (358)
Q Consensus 3 Ilv~GD~HG~l---------d----~i~~~v~~~-~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~ 68 (358)
|.+++|.|-.. . ...+.+.+. +... .++|+||++||+....... +.....+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~-~~~D~viiaGDl~~~~~~~------------~~~~~l~~l 67 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVV-APEDIVLIPGDISWAMKLE------------EAKLDLAWI 67 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcC-CCCCEEEEcCCCccCCChH------------HHHHHHHHH
Confidence 56889999551 1 222333222 2222 2799999999997322111 111222333
Q ss_pred cCCCCCCccEEEEcCCCCCc----hhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCC-ccCCCCCCCCCCCC
Q 018289 69 SGQEVAPIPTIFIGGNHEAS----NYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNA-RHYRLGHYERPPYN 143 (358)
Q Consensus 69 ~g~~~~pvpt~fI~GNHE~~----~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~-~~y~~~~~e~~Py~ 143 (358)
+..+.|+|+|+||||.. ..+.+. +.++..++.....+.+++++|.|+.+-... .++ .+++
T Consensus 68 ---~~l~~~v~~V~GNHD~~~~~~~~~~~~-----l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~-------~~~~ 132 (232)
T cd07393 68 ---DALPGTKVLLKGNHDYWWGSASKLRKA-----LEESRLALLFNNAYIDDDVAICGTRGWDNPGNPW-------PPIN 132 (232)
T ss_pred ---HhCCCCeEEEeCCccccCCCHHHHHHH-----HHhcCeEEeccCcEEECCEEEEEEEeeCCCCCcc-------cccc
Confidence 22456789999999952 222221 122222333345667899999998642211 111 0000
Q ss_pred hhhH-hhhhhhhhHHHHH----HhccC----CCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHH
Q 018289 144 ESTI-RSVYHVREYDVHK----LMQIE----EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLL 214 (358)
Q Consensus 144 ~~~~-~s~yh~re~dv~k----L~~~~----~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll 214 (358)
+..+ .+-.++.+.+... |.... .++-|+++|.+|.... .++..+.+++
T Consensus 133 ~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~-----------------------~~~~~~~~~~ 189 (232)
T cd07393 133 ETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANEN-----------------------GDDSPISKLI 189 (232)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCC-----------------------CCHHHHHHHH
Confidence 0000 0000011111111 22221 1357999999986542 1344567888
Q ss_pred HHhCCCEEEEcCCCCccce
Q 018289 215 EKLKPSYWFSAHLHCKFAA 233 (358)
Q Consensus 215 ~~lkPrywfsGH~H~~f~~ 233 (358)
++.++++.|+||.|.....
T Consensus 190 ~~~~v~~vl~GH~H~~~~~ 208 (232)
T cd07393 190 EEYGVDICVYGHLHGVGRD 208 (232)
T ss_pred HHcCCCEEEECCCCCCccc
Confidence 8889999999999977543
No 22
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.16 E-value=4.6e-09 Score=100.12 Aligned_cols=106 Identities=18% Similarity=0.189 Sum_probs=61.2
Q ss_pred CEEEEEcCCC--CC-----------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHH
Q 018289 1 MRIAVEGCMH--GE-----------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (358)
Q Consensus 1 MkIlv~GD~H--G~-----------ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y 67 (358)
.||++++|+| .. .+.+-+.++.+++. ++|+||++||+....... -++.+..+.+.
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~---~~d~vv~~GDlv~~~~~~---------~~~~~~~~~~~ 68 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE---SLDFVVQLGDIIDGDNAR---------AEEALDAVLAI 68 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC---CCCEEEECCCeecCCCch---------HHHHHHHHHHH
Confidence 4899999999 21 23344445555443 599999999997543221 01223344455
Q ss_pred hcCCCCCCccEEEEcCCCCCchhHHHHhh--CCccCCcEEEeCCceEEEEcCEEEEEEeCc
Q 018289 68 YSGQEVAPIPTIFIGGNHEASNYLWELYY--GGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (358)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~~~l~el~~--gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (358)
++ ..++|+++++||||.......... ..+.-+.-| -.++.+|.|+.++.+.
T Consensus 69 l~---~l~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~y-----ysf~~~~~~~i~lds~ 121 (267)
T cd07396 69 LD---RLKGPVHHVLGNHDLYNPSREYLLLYTLLGLGAPY-----YSFSPGGIRFIVLDGY 121 (267)
T ss_pred HH---hcCCCEEEecCccccccccHhhhhcccccCCCCce-----EEEecCCcEEEEEeCC
Confidence 43 356899999999997643222110 000011111 2345688899888764
No 23
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.13 E-value=1.6e-09 Score=95.10 Aligned_cols=64 Identities=25% Similarity=0.408 Sum_probs=42.6
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
|||+++||+||+...+-..++.++ ... ++|.+|+|||+... ++.+++ ++...|+++
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~-~~~-~~d~ii~~GD~~~~-------------------~~~~~l---~~~~~~~~~ 56 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFN-LES-NVDLVIHAGDLTSP-------------------FVLKEF---EDLAAKVIA 56 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHh-hcc-CCCEEEEcCCCCCH-------------------HHHHHH---HHhCCceEE
Confidence 999999999999865443333333 221 59999999998721 112222 123447899
Q ss_pred EcCCCCCc
Q 018289 81 IGGNHEAS 88 (358)
Q Consensus 81 I~GNHE~~ 88 (358)
|.||||..
T Consensus 57 V~GN~D~~ 64 (158)
T TIGR00040 57 VRGNNDGE 64 (158)
T ss_pred EccCCCch
Confidence 99999863
No 24
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.09 E-value=1.4e-09 Score=99.68 Aligned_cols=104 Identities=20% Similarity=0.194 Sum_probs=59.5
Q ss_pred CEEEEEcCCCCChH----HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCc
Q 018289 1 MRIAVEGCMHGELD----NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (358)
Q Consensus 1 MkIlv~GD~HG~ld----~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pv 76 (358)
|||++++|+|.... .+.+.++.+++ .++|++|++||++....... ..+.++++.. ..++
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~---~~~d~vl~~GD~~~~~~~~~-------------~~~~~~l~~l-~~~~ 64 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINA---LKPDLVVLTGDLVDGSVDVL-------------ELLLELLKKL-KAPL 64 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhc---cCCCEEEEcCcccCCcchhh-------------HHHHHHHhcc-CCCC
Confidence 89999999998643 33333444332 25899999999986543221 1223333322 3568
Q ss_pred cEEEEcCCCCCchhHHHHhhCCccCCcEEEeCCceE-EEEcCEEEE
Q 018289 77 PTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGV-VKFGNIRIG 121 (358)
Q Consensus 77 pt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv-~~i~GlrIa 121 (358)
|++++.||||............--..|+.+|....+ ++.+|.+|.
T Consensus 65 ~v~~v~GNHD~~~~~~~~~~~~l~~~~v~~L~~~~~~~~~~~~~i~ 110 (223)
T cd07385 65 GVYAVLGNHDYYSGDEENWIEALESAGITVLRNESVEISVGGATIG 110 (223)
T ss_pred CEEEECCCcccccCchHHHHHHHHHcCCEEeecCcEEeccCCeEEE
Confidence 999999999976332211000001235666655443 344665554
No 25
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.08 E-value=1.5e-09 Score=101.84 Aligned_cols=221 Identities=18% Similarity=0.157 Sum_probs=109.0
Q ss_pred CEEEEEcCCCCChH--HHHHH-HHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCcc
Q 018289 1 MRIAVEGCMHGELD--NVYKT-LQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIP 77 (358)
Q Consensus 1 MkIlv~GD~HG~ld--~i~~~-v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvp 77 (358)
|||++++|+|.... .+.+. ++.+.... .++|+|+++||++..+...+.. ++...++.++.+. ..+.+++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d~l~i~GDl~d~~~g~~~~----~~~~~~~~~~l~~---l~~~g~~ 72 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQADALYILGDLFEAWIGDDDP----SPFAREIAAALKA---LSDSGVP 72 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEccceeccccccCcC----CHHHHHHHHHHHH---HHHcCCe
Confidence 99999999996432 22221 22222222 2699999999998654322210 1112233333333 3345689
Q ss_pred EEEEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHH
Q 018289 78 TIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYD 157 (358)
Q Consensus 78 t~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~d 157 (358)
+++|.||||... ..... -..++..+....+++++|.||.-..|--...+ ...|. ..+.+ +|..
T Consensus 73 v~~v~GNHD~~~--~~~~~---~~~g~~~l~~~~~~~~~g~~i~l~HGd~~~~~-------d~~y~--~~r~~--~r~~- 135 (241)
T PRK05340 73 CYFMHGNRDFLL--GKRFA---KAAGMTLLPDPSVIDLYGQRVLLLHGDTLCTD-------DKAYQ--RFRRK--VRNP- 135 (241)
T ss_pred EEEEeCCCchhh--hHHHH---HhCCCEEeCCcEEEEECCEEEEEECCcccccC-------CHHHH--HHHHH--HhCH-
Confidence 999999999531 11110 01345566666777889999988777432110 01110 01111 1111
Q ss_pred HHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhh---cccCCCCCcHHHHHHHHHhCCCEEEEcCCCCcccee
Q 018289 158 VHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEK---EIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 234 (358)
Q Consensus 158 v~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~---~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~ 234 (358)
.=+.+-+..|..... ...+.++.++--+. ...-.......+.+++++.++++.++||.|..-...
T Consensus 136 ----------~~~~~~~~~p~~~~~--~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 203 (241)
T PRK05340 136 ----------WLQWLFLALPLSIRL--RIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQ 203 (241)
T ss_pred ----------HHHHHHHhCCHHHHH--HHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceee
Confidence 111111112221100 01111111100000 000112344668888899999999999999764322
Q ss_pred eccCCCCCeeEEEEccccCCCCCeeE
Q 018289 235 VQHGEDSPVTKFLALDKCLPRRKFLQ 260 (358)
Q Consensus 235 ~~~~~~~~~TrFlaL~k~~~~rk~l~ 260 (358)
.. ..+..-+.++|+.......|+.
T Consensus 204 ~~--~~~~~~~~~~lgdw~~~~~~~~ 227 (241)
T PRK05340 204 LQ--AGGQPATRIVLGDWHEQGSVLK 227 (241)
T ss_pred cc--CCCcceEEEEeCCCCCCCeEEE
Confidence 21 1111236889998866555543
No 26
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.07 E-value=2.6e-09 Score=91.64 Aligned_cols=50 Identities=18% Similarity=0.177 Sum_probs=37.5
Q ss_pred EEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceee
Q 018289 170 IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVV 235 (358)
Q Consensus 170 IlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~ 235 (358)
|+++|-+|.......+. ...+...+.+++++.+++++++||.|..+....
T Consensus 81 iv~~Hhp~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 81 IVVLHHPLVPPPGSGRE----------------RLLDAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred EEEecCCCCCCCccccc----------------cCCCHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 88899888776432210 112677889999999999999999999886553
No 27
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.07 E-value=1.9e-09 Score=88.19 Aligned_cols=119 Identities=27% Similarity=0.271 Sum_probs=80.9
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEEcC
Q 018289 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGG 83 (358)
Q Consensus 4 lv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI~G 83 (358)
+++||+|+............ .....+.|+||++||+............ . + ........+|++++.|
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~-~~~~~~~~~vi~~GD~~~~~~~~~~~~~---------~-~---~~~~~~~~~~~~~~~G 66 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAA-LAAAEKPDFVLVLGDLVGDGPDPEEVLA---------A-A---LALLLLLGIPVYVVPG 66 (131)
T ss_pred CeeecccCCccchHHHHHHH-HhcccCCCEEEECCcccCCCCCchHHHH---------H-H---HHHhhcCCCCEEEeCC
Confidence 47899999987766543111 1222378999999999876544332111 0 0 1224557889999999
Q ss_pred CCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHHHHHhc
Q 018289 84 NHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQ 163 (358)
Q Consensus 84 NHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv~kL~~ 163 (358)
|||
T Consensus 67 NHD----------------------------------------------------------------------------- 69 (131)
T cd00838 67 NHD----------------------------------------------------------------------------- 69 (131)
T ss_pred Cce-----------------------------------------------------------------------------
Confidence 998
Q ss_pred cCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCcccee
Q 018289 164 IEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 234 (358)
Q Consensus 164 ~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~ 234 (358)
|+++|.+|......... ....+......++...+|.++|+||.|......
T Consensus 70 ------i~~~H~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 ------ILLTHGPPYDPLDELSP---------------DEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred ------EEEeccCCCCCchhhcc---------------cchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 77888888765543221 011256788999999999999999999887654
No 28
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.93 E-value=5.3e-09 Score=95.37 Aligned_cols=183 Identities=16% Similarity=0.163 Sum_probs=93.4
Q ss_pred EEEEEcCCCCCh-----------HHHHHHHHHHHHh-cCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhc
Q 018289 2 RIAVEGCMHGEL-----------DNVYKTLQYMENI-NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (358)
Q Consensus 2 kIlv~GD~HG~l-----------d~i~~~v~~~~~k-~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~ 69 (358)
||+.++|+|=.. +..++.++++.+. ...++|+||++||++...... .+.+..+.+++.
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~----------~~~~~~~~~~~~ 70 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPS----------PEALELLIEALR 70 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCC----------HHHHHHHHHHHH
Confidence 799999999321 1122222222211 112699999999998754321 112233334433
Q ss_pred CCCCCCccEEEEcCCCCCchhHHHHhhCCccCCcEEEeC----Cce--EEE--EcCEEEEEEeCccCCccCCCCCCCCCC
Q 018289 70 GQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG----FAG--VVK--FGNIRIGGLSGIYNARHYRLGHYERPP 141 (358)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg----~~g--v~~--i~GlrIaGlsGi~~~~~y~~~~~e~~P 141 (358)
....+.+|+++|.||||............ ...++..++ ... ... .+++.|.|++...+.
T Consensus 71 ~~~~~~~~v~~~~GNHD~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~------------ 137 (223)
T cd00840 71 RLKEAGIPVFIIAGNHDSPSRLGALSPLL-ALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS------------ 137 (223)
T ss_pred HHHHCCCCEEEecCCCCCccccccccchH-hhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH------------
Confidence 33335789999999999875432211111 122343331 111 111 245677776532110
Q ss_pred CChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCE
Q 018289 142 YNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSY 221 (358)
Q Consensus 142 y~~~~~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPry 221 (358)
.....+ ...+..........+-|+++|....+...... ...+.....+...+..|
T Consensus 138 ---~~~~~~---~~~~~~~~~~~~~~~~Il~~H~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~d~ 192 (223)
T cd00840 138 ---RLRDLL---ADAELRPRPLDPDDFNILLLHGGVAGAGPSDS-------------------ERAPFVPEALLPAGFDY 192 (223)
T ss_pred ---HHHHHH---HHHHHHhhccCCCCcEEEEEeeeeecCCCCcc-------------------cccccCcHhhcCcCCCE
Confidence 000000 00001111122456789999999877653210 00223344456678899
Q ss_pred EEEcCCCCccc
Q 018289 222 WFSAHLHCKFA 232 (358)
Q Consensus 222 wfsGH~H~~f~ 232 (358)
+++||.|....
T Consensus 193 v~~GH~H~~~~ 203 (223)
T cd00840 193 VALGHIHRPQI 203 (223)
T ss_pred EECCCcccCee
Confidence 99999998764
No 29
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=98.92 E-value=1.6e-08 Score=96.80 Aligned_cols=186 Identities=19% Similarity=0.180 Sum_probs=98.4
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
.|++|+||.|..-..-.+.++++.+. ..++|+||++||+......... .+...|.+.++.. ...+|+++
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~-~~~~d~vl~~GDl~~~~~~~~~---------~~~~~~~~~~~~~-~~~~P~~~ 73 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE-LGNYDAILHVGDLAYADGYNNG---------SRWDTFMRQIEPL-ASYVPYMV 73 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc-cCCccEEEEcCchhhhcCCccc---------hhHHHHHHHHHHH-HhcCCcEE
Confidence 37999999995211122334444443 2379999999999743222100 0112233333221 13579999
Q ss_pred EcCCCCCchhHHHHhh------------CCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHh
Q 018289 81 IGGNHEASNYLWELYY------------GGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIR 148 (358)
Q Consensus 81 I~GNHE~~~~l~el~~------------gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~ 148 (358)
++||||.......... +....++.|| .+.+++++|.+|....... . .....+.++
T Consensus 74 ~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-----sf~~g~v~fi~Lds~~~~~---~-----~~~~~~q~~ 140 (294)
T cd00839 74 TPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWY-----SFDVGPVHFVSLSTEVDFY---G-----DGPGSPQYD 140 (294)
T ss_pred cCcccccccCCCCcccccccccccccCCCCCCCCCceE-----EEeeCCEEEEEEecccccc---c-----CCCCcHHHH
Confidence 9999997532111000 0011123332 3567999999987643210 0 011112221
Q ss_pred hhhhhhhHHHHHHhccC---CCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEc
Q 018289 149 SVYHVREYDVHKLMQIE---EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSA 225 (358)
Q Consensus 149 s~yh~re~dv~kL~~~~---~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsG 225 (358)
-+ +. .|.+.. .+.-|+++|.++.......+.. .........+.+|+++.+...+|+|
T Consensus 141 WL----~~---~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~-------------~~~~~~~~~l~~ll~~~~v~~vl~G 200 (294)
T cd00839 141 WL----EA---DLAKVDRSKTPWIIVMGHRPMYCSNTDHDDC-------------IEGEKMRAALEDLFYKYGVDLVLSG 200 (294)
T ss_pred HH----HH---HHHHhcccCCCeEEEEeccCcEecCcccccc-------------chhHHHHHHHHHHHHHhCCCEEEEc
Confidence 11 11 222222 2457999999886543221100 0012344668889999999999999
Q ss_pred CCCCc
Q 018289 226 HLHCK 230 (358)
Q Consensus 226 H~H~~ 230 (358)
|.|..
T Consensus 201 H~H~y 205 (294)
T cd00839 201 HVHAY 205 (294)
T ss_pred cceee
Confidence 99964
No 30
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.90 E-value=7.5e-08 Score=100.03 Aligned_cols=125 Identities=18% Similarity=0.217 Sum_probs=74.2
Q ss_pred CEEEEEcCCC-CCh----HHHHHHHHHHHHhc------CCCccEEEEecCccccCCc--chhhhccchhhhHhhhHHHHH
Q 018289 1 MRIAVEGCMH-GEL----DNVYKTLQYMENIN------SYKIDLLLCCGDFQAVRNE--NDMESLNVPRKYREMKSFWKY 67 (358)
Q Consensus 1 MkIlv~GD~H-G~l----d~i~~~v~~~~~k~------g~~~DllI~~GDf~~~~n~--~dl~~~~~p~k~~~l~~F~~y 67 (358)
++|++++|+| |.- +.+...++.++... ..++|.||++||+...... .+...+..+.-+..+..+.++
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 5899999999 542 12222233333110 1268999999999864211 111122233334444455555
Q ss_pred hcCCCCCCccEEEEcCCCCCchhHH------HHhhCCccC-CcEEEeCCceEEEEcCEEEEEEeCcc
Q 018289 68 YSGQEVAPIPTIFIGGNHEASNYLW------ELYYGGWAA-PNIYFLGFAGVVKFGNIRIGGLSGIY 127 (358)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~~~l~------el~~gg~va-~NI~yLg~~gv~~i~GlrIaGlsGi~ 127 (358)
++... ..+++++|+||||...... ..+ ...+. +|+.++..-..++++|.+|.+.+|.-
T Consensus 324 L~~L~-~~i~V~~ipGNHD~~~~~lPQ~~l~~~l-~~~l~~~~v~~lsNP~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 324 LKQIP-EDIKIIISPGNHDAVRQAEPQPAFPEEI-RSLFPEHNVTFVSNPALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHhhh-cCCeEEEecCCCcchhhccCCCCccHHH-HHhcCcCCeEEecCCeEEEECCEEEEEECCCC
Confidence 54432 4689999999999764210 000 01122 58999988777889999999999863
No 31
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.88 E-value=1.5e-07 Score=87.88 Aligned_cols=111 Identities=14% Similarity=0.130 Sum_probs=66.2
Q ss_pred EEEEcCCCCChH---HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEE
Q 018289 3 IAVEGCMHGELD---NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTI 79 (358)
Q Consensus 3 Ilv~GD~HG~ld---~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~ 79 (358)
+++++|+|.... .....++.+.+... ++|+||++||++..+...+. .+.-+.++.++.+.+ .+.++++|
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~----~~~~~~~~~~~l~~L---~~~~~~v~ 72 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDD----PSTLARSVAQAIRQV---SDQGVPCY 72 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCC----CCHHHHHHHHHHHHH---HHCCCeEE
Confidence 378999996431 11222344444333 69999999999865422211 011122333444443 33468999
Q ss_pred EEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCc
Q 018289 80 FIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (358)
Q Consensus 80 fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (358)
+|.||||.. +..... -..++..+....+++++|.+|.-+.|-
T Consensus 73 ~v~GNHD~~--~~~~~~---~~~gi~~l~~~~~~~~~g~~ill~HGd 114 (231)
T TIGR01854 73 FMHGNRDFL--IGKRFA---REAGMTLLPDPSVIDLYGQKVLLMHGD 114 (231)
T ss_pred EEcCCCchh--hhHHHH---HHCCCEEECCCEEEEECCEEEEEEcCc
Confidence 999999963 111110 123567787777888999999888774
No 32
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.84 E-value=5.6e-07 Score=85.11 Aligned_cols=192 Identities=16% Similarity=0.082 Sum_probs=100.8
Q ss_pred EEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHH
Q 018289 2 RIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (358)
Q Consensus 2 kIlv~GD~HG~ld----------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~ 65 (358)
+++++||+|-... .+-+.++.+++.. .++|+||++||+.......+. .+.+...|.
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~-~~pd~ii~~GDl~~~~~~~~~-------~~~~~~~~~ 77 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLN-PKPKFVVVCGDLVNAMPGDEL-------RERQVSDLK 77 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcC-CCCCEEEEeCCcCCCCcchhh-------HHHHHHHHH
Confidence 6899999997641 1222333333322 279999999999865433221 112334455
Q ss_pred HHhcCCCCCCccEEEEcCCCCCchh-----HHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCC
Q 018289 66 KYYSGQEVAPIPTIFIGGNHEASNY-----LWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERP 140 (358)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~~~-----l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~ 140 (358)
+.+... ..++|+++|+||||.... +... ... ..+. .-.+.++|+|+.++....-. .+. ..
T Consensus 78 ~~~~~~-~~~vp~~~i~GNHD~~~~~~~~~~~~f-~~~-~g~~------~y~~~~~~~~~i~lds~~~~----~~~--~~ 142 (262)
T cd07395 78 DVLSLL-DPDIPLVCVCGNHDVGNTPTEESIKDY-RDV-FGDD------YFSFWVGGVFFIVLNSQLFF----DPS--EV 142 (262)
T ss_pred HHHhhc-cCCCcEEEeCCCCCCCCCCChhHHHHH-HHH-hCCc------ceEEEECCEEEEEecccccc----Ccc--cc
Confidence 554432 246899999999997411 1111 010 0111 11345789999988654211 100 11
Q ss_pred CC-ChhhHhhhhhhhhHHHHHHhcc---CCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHH
Q 018289 141 PY-NESTIRSVYHVREYDVHKLMQI---EEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEK 216 (358)
Q Consensus 141 Py-~~~~~~s~yh~re~dv~kL~~~---~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~ 216 (358)
+. ..++++=+ + +.|.+. ..+.-|+++|.+|....... . ..+|. ........+.+++++
T Consensus 143 ~~~~~~ql~WL----~---~~L~~~~~~~~~~~iv~~H~P~~~~~~~~-~------~~~~~----~~~~~~~~l~~ll~~ 204 (262)
T cd07395 143 PELAQAQDVWL----E---EQLEIAKESDCKHVIVFQHIPWFLEDPDE-E------DSYFN----IPKSVRKPLLDKFKK 204 (262)
T ss_pred ccchHHHHHHH----H---HHHHHHHhccCCcEEEEECcCCccCCCCC-C------cccCC----cCHHHHHHHHHHHHh
Confidence 11 12222111 1 112222 24567999999996432111 0 00110 001123457788888
Q ss_pred hCCCEEEEcCCCCcccee
Q 018289 217 LKPSYWFSAHLHCKFAAV 234 (358)
Q Consensus 217 lkPrywfsGH~H~~f~~~ 234 (358)
.+-..+||||.|......
T Consensus 205 ~~V~~v~~GH~H~~~~~~ 222 (262)
T cd07395 205 AGVKAVFSGHYHRNAGGR 222 (262)
T ss_pred cCceEEEECccccCCceE
Confidence 899999999999876543
No 33
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.82 E-value=2.1e-07 Score=88.47 Aligned_cols=191 Identities=17% Similarity=0.182 Sum_probs=96.2
Q ss_pred EEEEcCCCCChH---H--HH-H-HHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCC-
Q 018289 3 IAVEGCMHGELD---N--VY-K-TLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVA- 74 (358)
Q Consensus 3 Ilv~GD~HG~ld---~--i~-~-~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~- 74 (358)
|+.++|+|-... . .+ + .++.+++ .++|++|++||+.......+......+. +-.+|.+.+......
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~---~~pd~i~~~GD~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDV---IKPALVLATGDLTDNKTGNKLPSYQYQE---EWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHh---hCCCEEEEccccccccccCCCcccccHH---HHHHHHHHHHHhCCCC
Confidence 678999996322 1 11 1 1222322 3799999999998544332221110010 111444443332222
Q ss_pred CccEEEEcCCCCCchhH-----HHHh--hCC-ccCCcEEEeCCceEEE--EcCEEEEEEeCccCCccCCCCCCCCCC-CC
Q 018289 75 PIPTIFIGGNHEASNYL-----WELY--YGG-WAAPNIYFLGFAGVVK--FGNIRIGGLSGIYNARHYRLGHYERPP-YN 143 (358)
Q Consensus 75 pvpt~fI~GNHE~~~~l-----~el~--~gg-~va~NI~yLg~~gv~~--i~GlrIaGlsGi~~~~~y~~~~~e~~P-y~ 143 (358)
+.|++.|+||||..+.. ...+ +.+ +..+.-+ ...+ .++++|.|+.+...... ..+ +...+ .+
T Consensus 76 ~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~~~~~~~-----~~~~~~~~~~~~I~Ldt~~~~~~-~~~-~~~~g~l~ 148 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPSLDSENNYYRKYSATGRDGSFS-----FSHTTRFGNYSFIGVDPTLFPGP-KRP-FNFFGSLD 148 (256)
T ss_pred cceEEEeCCCCCcCCCCCccchhhHHHHhheecCCCccc-----eEEEecCCCEEEEEEcCccCCCC-CCC-CceeccCC
Confidence 57999999999975221 0111 111 1111111 1122 38899999987642110 000 00001 12
Q ss_pred hhhHhhhhhhhhHHHHHHhcc-CCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEE
Q 018289 144 ESTIRSVYHVREYDVHKLMQI-EEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYW 222 (358)
Q Consensus 144 ~~~~~s~yh~re~dv~kL~~~-~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPryw 222 (358)
++++..+ .+.|.+. ..+.-|+++|-++....... ...++. +.+++++.++.+.
T Consensus 149 ~~ql~wL-------~~~L~~~~~~~~~IV~~HhP~~~~~~~~------------------~~~~~~-~~~ll~~~~v~~v 202 (256)
T cd07401 149 KKLLDRL-------EKELEKSTNSNYTIWFGHYPTSTIISPS------------------AKSSSK-FKDLLKKYNVTAY 202 (256)
T ss_pred HHHHHHH-------HHHHHhcccCCeEEEEEcccchhccCCC------------------cchhHH-HHHHHHhcCCcEE
Confidence 2222221 1122222 23567999999885432111 012223 8888999999999
Q ss_pred EEcCCCCccc
Q 018289 223 FSAHLHCKFA 232 (358)
Q Consensus 223 fsGH~H~~f~ 232 (358)
||||.|....
T Consensus 203 l~GH~H~~~~ 212 (256)
T cd07401 203 LCGHLHPLGG 212 (256)
T ss_pred EeCCccCCCc
Confidence 9999998765
No 34
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.79 E-value=2.1e-07 Score=84.01 Aligned_cols=38 Identities=21% Similarity=0.086 Sum_probs=29.2
Q ss_pred HHHHHHHhCCCEEEEcCCCCccceeeccCCCCCeeEEEEccccC
Q 018289 210 AAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCL 253 (358)
Q Consensus 210 l~~ll~~lkPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~ 253 (358)
+..+++...+.+.++||.|..+..... .++++|.+.++
T Consensus 98 ~~~~~~~~~~dvii~GHTH~p~~~~~~------g~~viNPGSv~ 135 (178)
T cd07394 98 LAALQRQLDVDILISGHTHKFEAFEHE------GKFFINPGSAT 135 (178)
T ss_pred HHHHHHhcCCCEEEECCCCcceEEEEC------CEEEEECCCCC
Confidence 455566678899999999987765443 48999999886
No 35
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.78 E-value=4e-07 Score=84.19 Aligned_cols=195 Identities=14% Similarity=0.182 Sum_probs=102.1
Q ss_pred CEEEEEcCCCCChH----HHHHHHHHHHHh-cCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCC
Q 018289 1 MRIAVEGCMHGELD----NVYKTLQYMENI-NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAP 75 (358)
Q Consensus 1 MkIlv~GD~HG~ld----~i~~~v~~~~~k-~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~p 75 (358)
.+|+++||+|-..+ .+.+.++.+.+. ...++|++|++||+...... +..|....+..+- ..+.+
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~--------~~~~~~~~~~~~~---l~~~~ 69 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDN--------DAEWEAADKAFAR---LDKAG 69 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCC--------HHHHHHHHHHHHH---HHHcC
Confidence 48999999996332 111122222211 11269999999999864331 1234344333333 33357
Q ss_pred ccEEEEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhh
Q 018289 76 IPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVRE 155 (358)
Q Consensus 76 vpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re 155 (358)
+|+++++||||. +.++. +.. +.+++.=+ +
T Consensus 70 ~p~~~~~GNHD~--------------------------------~~~ld-------~~~--------~~~ql~WL----~ 98 (214)
T cd07399 70 IPYSVLAGNHDL--------------------------------VLALE-------FGP--------RDEVLQWA----N 98 (214)
T ss_pred CcEEEECCCCcc--------------------------------hhhCC-------CCC--------CHHHHHHH----H
Confidence 899999999981 01110 000 11111111 0
Q ss_pred HHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHh-CCCEEEEcCCCCcccee
Q 018289 156 YDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHLHCKFAAV 234 (358)
Q Consensus 156 ~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~l-kPrywfsGH~H~~f~~~ 234 (358)
+.|.+.....=|+++|.+|.......+.. .. + .....|...+.+++++. +-+..||||.|......
T Consensus 99 ---~~L~~~~~~~~iv~~H~p~~~~~~~~~~~-------~~--~-~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 99 ---EVLKKHPDRPAILTTHAYLNCDDSRPDSI-------DY--D-SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred ---HHHHHCCCCCEEEEecccccCCCCcCccc-------cc--c-cccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 12333333345999999987432211100 00 0 01234556788888887 68899999999887655
Q ss_pred ec-cCCCCCeeEEEEccc-cC--CCCCeeEEEeccCCCCC
Q 018289 235 VQ-HGEDSPVTKFLALDK-CL--PRRKFLQVFEIESGQGP 270 (358)
Q Consensus 235 ~~-~~~~~~~TrFlaL~k-~~--~~rk~l~a~~i~~~~~~ 270 (358)
.. .+..+..+.=+..+. +. .+.-|+.++.+++....
T Consensus 166 ~~~~~~~g~~v~~~~~~~q~~~~~g~~~~r~~~f~~~~~~ 205 (214)
T cd07399 166 LVSVGDAGRTVHQMLADYQGEPNGGNGFLRLLEFDPDNNK 205 (214)
T ss_pred EcccCCCCCEeeEEeecccCCCCCCcceEEEEEEecCCCE
Confidence 41 122233333222222 22 24578888888776543
No 36
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.77 E-value=1.9e-07 Score=89.49 Aligned_cols=104 Identities=20% Similarity=0.185 Sum_probs=58.6
Q ss_pred CEEEEEcCCCCC----hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCc
Q 018289 1 MRIAVEGCMHGE----LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (358)
Q Consensus 1 MkIlv~GD~HG~----ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pv 76 (358)
|||++++|+|.+ .+.+.+.++.+++ .++|+|+++||+.......+. ..+.+.++... ++.
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~---~~pDlVli~GD~~d~~~~~~~------------~~~~~~L~~L~-~~~ 113 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIE---QKPDLILLGGDYVLFDMPLNF------------SAFSDVLSPLA-ECA 113 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHh---cCCCEEEEccCcCCCCccccH------------HHHHHHHHHHh-hcC
Confidence 799999999976 3334444444333 379999999998752211111 12222222222 346
Q ss_pred cEEEEcCCCCCch------hHHHHhhCCccCCcEEEeCCceE-EEEcC--EEEEEEe
Q 018289 77 PTIFIGGNHEASN------YLWELYYGGWAAPNIYFLGFAGV-VKFGN--IRIGGLS 124 (358)
Q Consensus 77 pt~fI~GNHE~~~------~l~el~~gg~va~NI~yLg~~gv-~~i~G--lrIaGls 124 (358)
|+|+|.||||... .+.+... ..++..|.+..+ ++.+| +.|+|+.
T Consensus 114 pv~~V~GNHD~~~~~~~~~~~~~~l~----~~gi~lL~n~~~~i~~~~~~i~i~G~~ 166 (271)
T PRK11340 114 PTFACFGNHDRPVGTEKNHLIGETLK----SAGITVLFNQATVIATPNRQFELVGTG 166 (271)
T ss_pred CEEEecCCCCcccCccchHHHHHHHH----hcCcEEeeCCeEEEeeCCcEEEEEEec
Confidence 8999999999631 1112211 235667755443 34444 5667764
No 37
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=98.77 E-value=3.3e-07 Score=87.03 Aligned_cols=207 Identities=18% Similarity=0.194 Sum_probs=107.7
Q ss_pred CEEEEEcCCCCC-h---HHHHHHHHHHHHhcCCCccEEEEecCccccCCc--chhhhccchhhhHhhhHHHHHhcCCCCC
Q 018289 1 MRIAVEGCMHGE-L---DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNE--NDMESLNVPRKYREMKSFWKYYSGQEVA 74 (358)
Q Consensus 1 MkIlv~GD~HG~-l---d~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~--~dl~~~~~p~k~~~l~~F~~y~~g~~~~ 74 (358)
|+++++||.-.. - ..+-+.+.++.++ .++|++|++||+...... .+...+ ...|.+.++.. ..
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~--~~~dfvv~~GD~~y~~g~~~~~~~~~--------~~~~~~~~~~~-~~ 69 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAE--LGPDFILSLGDNFYDDGVGSVDDPRF--------ETTFEDVYSAP-SL 69 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHh--cCCCEEEeCCCccccCCCCCCcchHH--------HHHHHHHccch-hh
Confidence 689999998764 1 2344444444444 369999999998632211 110000 12233333322 25
Q ss_pred CccEEEEcCCCCCchhHHHH-h------hCCccCCcEEEeCCceEEEEc------CEEEEEEeCccCCccCCCCCCCCCC
Q 018289 75 PIPTIFIGGNHEASNYLWEL-Y------YGGWAAPNIYFLGFAGVVKFG------NIRIGGLSGIYNARHYRLGHYERPP 141 (358)
Q Consensus 75 pvpt~fI~GNHE~~~~l~el-~------~gg~va~NI~yLg~~gv~~i~------GlrIaGlsGi~~~~~y~~~~~e~~P 141 (358)
.+|+++|+||||........ . ...|..|+-|| .+.++ +++|.+|-...-...+... ..+
T Consensus 70 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~y-----~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~---~~~ 141 (277)
T cd07378 70 QVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMPAYYY-----RVSFPFPSSDTTVEFIMIDTVPLCGNSDDI---ASP 141 (277)
T ss_pred cCCeEEecCCcccCCCchheeehhccCCCCCccCcchhe-----EEEeecCCCCCEEEEEEEeChhHcCccccc---ccc
Confidence 78999999999976322111 0 12233344332 23344 6899888765432111100 000
Q ss_pred CC--hhhHhhhhhhhhHH-HH-HHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHh
Q 018289 142 YN--ESTIRSVYHVREYD-VH-KLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL 217 (358)
Q Consensus 142 y~--~~~~~s~yh~re~d-v~-kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~l 217 (358)
+. ...+. -.+.+ ++ .|.+...+.-|+++|.+|......+.. ..-...+.+++++.
T Consensus 142 ~~~~~~~~~----~~Q~~wL~~~L~~~~~~~~iv~~H~P~~~~~~~~~~-----------------~~~~~~l~~l~~~~ 200 (277)
T cd07378 142 YGPPNGKLA----EEQLAWLEKTLAASTADWKIVVGHHPIYSSGEHGPT-----------------SCLVDRLLPLLKKY 200 (277)
T ss_pred ccCcchhhH----HHHHHHHHHHHHhcCCCeEEEEeCccceeCCCCCCc-----------------HHHHHHHHHHHHHc
Confidence 00 00000 00111 11 233333456699999998754332210 01134678889999
Q ss_pred CCCEEEEcCCCCccceeeccCCCCCeeEEEEccc
Q 018289 218 KPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDK 251 (358)
Q Consensus 218 kPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k 251 (358)
+..++|+||.|........ ...|.++..+.
T Consensus 201 ~v~~vl~GH~H~~~~~~~~----~~~~~~i~~G~ 230 (277)
T cd07378 201 KVDAYLSGHDHNLQHIKDD----GSGTSFVVSGA 230 (277)
T ss_pred CCCEEEeCCcccceeeecC----CCCcEEEEeCC
Confidence 9999999999986533221 13577776654
No 38
>PLN02533 probable purple acid phosphatase
Probab=98.74 E-value=3.8e-07 Score=92.96 Aligned_cols=181 Identities=17% Similarity=0.245 Sum_probs=97.2
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
.|++++||.+-. ......++.+++ ..+|++|++||+....... . .-..|.+..+.. .+.+|.+.
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~---~~pD~vl~~GDl~y~~~~~---~--------~wd~f~~~i~~l-~s~~P~m~ 203 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSK---WDYDVFILPGDLSYANFYQ---P--------LWDTFGRLVQPL-ASQRPWMV 203 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHh---cCCCEEEEcCccccccchH---H--------HHHHHHHHhhhH-hhcCceEE
Confidence 379999998632 111233444433 2699999999996432111 0 113344443322 24579999
Q ss_pred EcCCCCCchh----------HHH---HhhCC-ccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhh
Q 018289 81 IGGNHEASNY----------LWE---LYYGG-WAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNEST 146 (358)
Q Consensus 81 I~GNHE~~~~----------l~e---l~~gg-~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~ 146 (358)
++||||.... ... .+... -...|.|| .+.++|++|..|+... ++.. ..++
T Consensus 204 ~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yY-----Sfd~g~vhfI~Lds~~---~~~~--------~~~Q 267 (427)
T PLN02533 204 THGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYY-----SFNVYGVHIIMLGSYT---DFEP--------GSEQ 267 (427)
T ss_pred eCccccccccccccCcCccchhhcccCCccccCCCCCceE-----EEEECCEEEEEEeCCc---cccC--------chHH
Confidence 9999997421 000 00000 01234444 3577999999987632 2211 1111
Q ss_pred HhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCccc-CCcchhhhhhccchhhcccCCCCC-cHHHHHHHHHhCCCEEEE
Q 018289 147 IRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITD-YGNCKELVRHKQYFEKEIQDGTLG-SEPAAQLLEKLKPSYWFS 224 (358)
Q Consensus 147 ~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~-~g~~~~l~~~kp~f~~~i~~~~lG-S~~l~~ll~~lkPrywfs 224 (358)
.+=+ +.++.+...-..+.-|++.|.+|..... +.+. ....+ ...+..|+.+.++.++|+
T Consensus 268 ~~WL----e~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~---------------~~~~~~r~~le~Ll~~~~Vdlvls 328 (427)
T PLN02533 268 YQWL----ENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGE---------------KESVGMKESMETLLYKARVDLVFA 328 (427)
T ss_pred HHHH----HHHHHhhcccCCCEEEEEeCCCeeecccccCCc---------------chhHHHHHHHHHHHHHhCCcEEEe
Confidence 1111 2222221111235679999999976532 1100 00011 246788999999999999
Q ss_pred cCCCCccce
Q 018289 225 AHLHCKFAA 233 (358)
Q Consensus 225 GH~H~~f~~ 233 (358)
||.|. |++
T Consensus 329 GH~H~-YeR 336 (427)
T PLN02533 329 GHVHA-YER 336 (427)
T ss_pred cceec-ccc
Confidence 99995 443
No 39
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.73 E-value=1.5e-07 Score=93.01 Aligned_cols=110 Identities=22% Similarity=0.184 Sum_probs=62.8
Q ss_pred CEEEEEcCCCCC-----------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhc
Q 018289 1 MRIAVEGCMHGE-----------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (358)
Q Consensus 1 MkIlv~GD~HG~-----------ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~ 69 (358)
|||+.+||+|=. ....++.+-.+-.++ ++|+||++||++..+.......+ ....+ .+..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~--~vD~VliaGDlfD~~~~~~~~~~------~~~~~--~l~~ 70 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAH--GITTWIQLGDTFDVRKAITQNTM------NFVRE--KIFD 70 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHc--CCCEEEECCcccCCCCCCCHHHH------HHHHH--HHHH
Confidence 999999999932 112233322222222 69999999999976533221111 01111 0122
Q ss_pred CCCCCCccEEEEcCCCCCch--h-----HHHHhhCCccCCcEEEeCCceEEEEcCEEEEEE
Q 018289 70 GQEVAPIPTIFIGGNHEASN--Y-----LWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGL 123 (358)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~~--~-----l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGl 123 (358)
...++++|+++|.||||... . ..++. + ..+|++..+....++++|++|..+
T Consensus 71 ~L~~~gi~v~~I~GNHD~~~~~~~~~~~~~~ll-~--~~~~v~v~~~~~~v~i~g~~i~~l 128 (340)
T PHA02546 71 LLKEAGITLHVLVGNHDMYYKNTIRPNAPTELL-G--QYDNITVIDEPTTVDFDGCSIDLI 128 (340)
T ss_pred HHHHCCCeEEEEccCCCcccccccccCchHHHH-h--hCCCEEEeCCceEEEECCEEEEEC
Confidence 23456899999999999631 0 11221 1 246777776666677777776653
No 40
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=98.70 E-value=2.5e-07 Score=86.91 Aligned_cols=219 Identities=16% Similarity=0.184 Sum_probs=110.4
Q ss_pred EEEcCCC--CCh--HHHHHH-HHHHHHhc--CCCccEEEEecCccccCCc--chhhhccchhhhHhhhHHHHHhcCCCCC
Q 018289 4 AVEGCMH--GEL--DNVYKT-LQYMENIN--SYKIDLLLCCGDFQAVRNE--NDMESLNVPRKYREMKSFWKYYSGQEVA 74 (358)
Q Consensus 4 lv~GD~H--G~l--d~i~~~-v~~~~~k~--g~~~DllI~~GDf~~~~n~--~dl~~~~~p~k~~~l~~F~~y~~g~~~~ 74 (358)
++++|+| +.. ...++. ++.++... ..++|+||++||++..... .....+......+.+..+.++++... .
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-~ 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-S 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc-c
Confidence 6899999 321 112222 22222211 1257999999999865311 00000000111223344555554443 3
Q ss_pred CccEEEEcCCCCCchhH------HHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHh
Q 018289 75 PIPTIFIGGNHEASNYL------WELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIR 148 (358)
Q Consensus 75 pvpt~fI~GNHE~~~~l------~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~ 148 (358)
.+++++|+||||..... .+........+|+..+.....++++|.+|.+.+|..-. +..+. ....+.+.
T Consensus 81 ~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~~~~v~~l~Np~~~~~~g~~i~~~~G~~~~-d~~~~---~~~~~~~~-- 154 (243)
T cd07386 81 HIKIIIIPGNHDAVRQAEPQPALPEEIRKLFLPGNVEFVSNPALVKIHGVDVLIYHGRSID-DVVKL---IPGLSYDK-- 154 (243)
T ss_pred CCeEEEeCCCCCcccccCCCCCccHHHHhhcCCCceEEeCCCCEEEECCEEEEEECCCCHH-HHHHh---CCCCCccc--
Confidence 58999999999985321 11111111136888887766778999999988886421 11100 00000000
Q ss_pred hhhhhhhHH-HHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCC
Q 018289 149 SVYHVREYD-VHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHL 227 (358)
Q Consensus 149 s~yh~re~d-v~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~ 227 (358)
..+ ++.+.. + .|-+|..-.. . +.+..+ + +.+.-.-.|.+.|+||.
T Consensus 155 ------~~~~~~~~l~--~------~hl~P~~~~~---~-------~~~~~~-~---------~~~~~~~~p~vii~Gh~ 200 (243)
T cd07386 155 ------PGKAMEELLK--R------RHLAPIYGGR---T-------PIAPEP-E---------DYLVIDEVPDILHTGHV 200 (243)
T ss_pred ------HHHHHHHHHh--h------cccCCCCCCC---E-------eeCCCC-C---------CCEEecCCCCEEEECCC
Confidence 001 111111 1 1333321100 0 000000 0 00111248999999999
Q ss_pred CCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccCCCC
Q 018289 228 HCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQG 269 (358)
Q Consensus 228 H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~~~~~ 269 (358)
|..+..... .+.+++.+.+-.+-.|=--|.|.+.++
T Consensus 201 h~~~~~~~~------~~~~vn~Gsf~~~~~~~~~~~~~~~~~ 236 (243)
T cd07386 201 HVYGVGVYR------GVLLVNSGTWQSQTEFQKKMNINPTPG 236 (243)
T ss_pred CchHhEEEC------CEEEEECCCCcCCCCcceeeccCCCcc
Confidence 987655432 589999999987777777788865444
No 41
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=98.70 E-value=1.1e-06 Score=83.86 Aligned_cols=173 Identities=18% Similarity=0.158 Sum_probs=90.1
Q ss_pred CccEEEEecCccccCCcchhhhccchhhh-HhhhHHHHHhcCCCCCCccEEEEcCCCCCch-------h--HHHHhhCCc
Q 018289 30 KIDLLLCCGDFQAVRNENDMESLNVPRKY-REMKSFWKYYSGQEVAPIPTIFIGGNHEASN-------Y--LWELYYGGW 99 (358)
Q Consensus 30 ~~DllI~~GDf~~~~n~~dl~~~~~p~k~-~~l~~F~~y~~g~~~~pvpt~fI~GNHE~~~-------~--l~el~~gg~ 99 (358)
++|++|++||++.......- ..+ .+...|.+.+... ...+|++.|+||||-.- . ..+...|.
T Consensus 45 ~PD~vv~lGDL~d~G~~~~~------~~~~~~~~rf~~i~~~~-~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~Fg~- 116 (257)
T cd08163 45 KPDSTIFLGDLFDGGRDWAD------EYWKKEYNRFMRIFDPS-PGRKMVESLPGNHDIGFGNGVVLPVRQRFEKYFGP- 116 (257)
T ss_pred CCCEEEEecccccCCeeCcH------HHHHHHHHHHHHHhcCC-CccceEEEeCCCcccCCCCCCCHHHHHHHHHHhCC-
Confidence 69999999999754221110 111 1244555543221 11368999999999520 0 01111221
Q ss_pred cCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHHHH-Hhcc-CCCccEEEeCCCC
Q 018289 100 AAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK-LMQI-EEPIDIFLSHDWP 177 (358)
Q Consensus 100 va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv~k-L~~~-~~~vDIlLSHdwP 177 (358)
...++.++|.+|.++-++.-... . .......+..- +++ +... ....=||+||-+.
T Consensus 117 ---------~~~~~~~~~~~fV~Lds~~l~~~-~-----~~~~~~~~~~~--------l~~~l~~~~~~~p~ILl~H~Pl 173 (257)
T cd08163 117 ---------TSRVIDVGNHTFVILDTISLSNK-D-----DPDVYQPPREF--------LHSFSAMKVKSKPRILLTHVPL 173 (257)
T ss_pred ---------CceEEEECCEEEEEEccccccCC-c-----ccccchhHHHH--------HHhhhhccCCCCcEEEEecccc
Confidence 12456778899988877632110 0 00011111000 111 2222 2345699999997
Q ss_pred CCcccCCcchhhhhhccchhh---cccCCCCCcHHHHHHHHHhCCCEEEEcCCCCcccee
Q 018289 178 CGITDYGNCKELVRHKQYFEK---EIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAV 234 (358)
Q Consensus 178 ~gI~~~g~~~~l~~~kp~f~~---~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~ 234 (358)
.-.....+- .+-..++.+.. .--.+.+....-.+|++.+||+..|+||.|...+-.
T Consensus 174 yr~~~~~cg-~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 174 YRPPNTSCG-PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred ccCCCCCCC-CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 655432110 01001111100 001125677788899999999999999999887654
No 42
>PRK09453 phosphodiesterase; Provisional
Probab=98.69 E-value=7.4e-08 Score=86.56 Aligned_cols=105 Identities=20% Similarity=0.202 Sum_probs=61.0
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
|||+++||+||+..++-+.++.+++ . ++|.+|||||+....... ..|.+|. ..++.+.+ ++...++++
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~-~--~~d~ii~lGDi~~~~~~~-----~~~~~~~-~~~~~~~l---~~~~~~v~~ 68 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQ-S--GADWLVHLGDVLYHGPRN-----PLPEGYA-PKKVAELL---NAYADKIIA 68 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHh-c--CCCEEEEcccccccCcCC-----CCccccC-HHHHHHHH---HhcCCceEE
Confidence 9999999999998776554444433 2 699999999997532110 1112221 11223332 223457899
Q ss_pred EcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeC
Q 018289 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSG 125 (358)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsG 125 (358)
|.||||... .....+. +. +.....++++|.||.-+.|
T Consensus 69 V~GNhD~~~--~~~~~~~---~~---~~~~~~~~l~g~~i~l~HG 105 (182)
T PRK09453 69 VRGNCDSEV--DQMLLHF---PI---MAPYQQVLLEGKRLFLTHG 105 (182)
T ss_pred EccCCcchh--hhhccCC---cc---cCceEEEEECCeEEEEECC
Confidence 999999631 1111111 11 1122346789999987766
No 43
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.60 E-value=1.4e-07 Score=84.91 Aligned_cols=89 Identities=25% Similarity=0.256 Sum_probs=61.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
|||+|+||+|+....+...+ ++... .++|++|+|||+........+ .+. ...+.++
T Consensus 2 m~ilviSDtH~~~~~~~~~~-~~~~~--~~~d~vih~GD~~~~~~~~~l-------------------~~~--~~~~i~~ 57 (172)
T COG0622 2 MKILVISDTHGPLRAIEKAL-KIFNL--EKVDAVIHAGDSTSPFTLDAL-------------------EGG--LAAKLIA 57 (172)
T ss_pred cEEEEEeccCCChhhhhHHH-HHhhh--cCCCEEEECCCcCCccchHHh-------------------hcc--cccceEE
Confidence 89999999999986444333 23222 269999999999876543211 110 2457899
Q ss_pred EcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCc
Q 018289 81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (358)
Q Consensus 81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (358)
|.||+|....- .-++...+++++|+||+-+.|.
T Consensus 58 V~GN~D~~~~~-------------~~~p~~~~~~~~g~ki~l~HGh 90 (172)
T COG0622 58 VRGNCDGEVDQ-------------EELPEELVLEVGGVKIFLTHGH 90 (172)
T ss_pred EEccCCCcccc-------------ccCChhHeEEECCEEEEEECCC
Confidence 99999875311 0144567889999999999884
No 44
>PHA03008 hypothetical protein; Provisional
Probab=98.60 E-value=1.1e-07 Score=85.91 Aligned_cols=96 Identities=22% Similarity=0.270 Sum_probs=61.4
Q ss_pred CcEEEeCCceEEEE----cCEEEEEEeCccCCccCCCCC----CCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEe
Q 018289 102 PNIYFLGFAGVVKF----GNIRIGGLSGIYNARHYRLGH----YERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLS 173 (358)
Q Consensus 102 ~NI~yLg~~gv~~i----~GlrIaGlsGi~~~~~y~~~~----~e~~Py~~~~~~s~yh~re~dv~kL~~~~~~vDIlLS 173 (358)
-|+.||.++++ ++ .|++|.|-+-+-. ..|...+ .+.+.|..+ ++.+......+. ++|||||
T Consensus 99 gnIIYLeDs~V-tI~f~~rgIKIYGSP~sP~-~~F~~sai~k~~~~wAf~~~--------~d~~i~wwn~IP-~tDILIT 167 (234)
T PHA03008 99 LDIIILRDDLI-EFDFFDDIIKIYGQSHIED-KKFKNSHIHKALEGIAHIKK--------NDDEINYRNHIP-KCDILIT 167 (234)
T ss_pred CCEEEEeCCcE-EEEecCCceEEECCCCCcc-hhcccccccccccccccccC--------ccccchhhccCC-CCCEEEe
Confidence 47999998886 55 7899988543321 0011000 012223211 111111223444 4999999
Q ss_pred CCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCC
Q 018289 174 HDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 228 (358)
Q Consensus 174 HdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H 228 (358)
|.+|.|+.+. .+|++.+.+-+.++||+||++||+-
T Consensus 168 HgPP~GhLD~--------------------~vGC~~Ll~~I~rVKPKyHVFGh~~ 202 (234)
T PHA03008 168 ASPPFAILDD--------------------DLACGDLFSKVIKIKPKFHIFNGLT 202 (234)
T ss_pred CCCCcccccc--------------------ccCcHHHHHHHHHhCCcEEEeCCcc
Confidence 9999999752 3799999999999999999999973
No 45
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.53 E-value=1.1e-06 Score=79.81 Aligned_cols=74 Identities=20% Similarity=0.154 Sum_probs=46.8
Q ss_pred CEEEEEcCCCCChH-----------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhc
Q 018289 1 MRIAVEGCMHGELD-----------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (358)
Q Consensus 1 MkIlv~GD~HG~ld-----------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~ 69 (358)
+||++++|+|-... ...+.++++-++ .++|++|++||+.......+ .-+..+..+.+.+
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~vv~~GDl~~~~~~~~-------~~~~~~~~~~~~l- 72 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA--EKPDLVVLTGDLITGENTND-------NSTSALDKAVSPM- 72 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh--cCCCEEEECCccccCCCCch-------HHHHHHHHHHHHH-
Confidence 69999999996322 223333333222 26899999999976433211 1234455555553
Q ss_pred CCCCCCccEEEEcCCCC
Q 018289 70 GQEVAPIPTIFIGGNHE 86 (358)
Q Consensus 70 g~~~~pvpt~fI~GNHE 86 (358)
....+|+++|.||||
T Consensus 73 --~~~~~p~~~~~GNHD 87 (199)
T cd07383 73 --IDRKIPWAATFGNHD 87 (199)
T ss_pred --HHcCCCEEEECccCC
Confidence 234689999999998
No 46
>PHA02239 putative protein phosphatase
Probab=98.47 E-value=3.4e-07 Score=86.26 Aligned_cols=73 Identities=16% Similarity=0.271 Sum_probs=50.4
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
|||+++||+||..+.+.+.++.++...+ +.|.||++||+..-.... .+ .+..+.+. ...+..+++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~-~~d~li~lGD~iDrG~~s-~~---------v~~~l~~~----~~~~~~~~~ 65 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERK-PEETIVFLGDYVDRGKRS-KD---------VVNYIFDL----MSNDDNVVT 65 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCC-CCCEEEEecCcCCCCCCh-HH---------HHHHHHHH----hhcCCCeEE
Confidence 8999999999999988877777754432 579999999998643221 11 12222332 123457899
Q ss_pred EcCCCCCc
Q 018289 81 IGGNHEAS 88 (358)
Q Consensus 81 I~GNHE~~ 88 (358)
|.||||..
T Consensus 66 l~GNHE~~ 73 (235)
T PHA02239 66 LLGNHDDE 73 (235)
T ss_pred EECCcHHH
Confidence 99999863
No 47
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=98.45 E-value=9.6e-06 Score=76.35 Aligned_cols=77 Identities=32% Similarity=0.407 Sum_probs=51.9
Q ss_pred CEEEEEcCCCCC--h---H-HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCC
Q 018289 1 MRIAVEGCMHGE--L---D-NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVA 74 (358)
Q Consensus 1 MkIlv~GD~HG~--l---d-~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~ 74 (358)
|||+.++|.|-. - . .+-+.++.++. .++|+||+.||+.... .+.-|+.+.+|.+ ....
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~---~~~D~~v~tGDl~~~~---------~~~~~~~~~~~l~----~~~~ 64 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQ---LKPDLLVVTGDLTNDG---------EPEEYRRLKELLA----RLEL 64 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhc---CCCCEEEEccCcCCCC---------CHHHHHHHHHHHh----hccC
Confidence 899999999976 1 1 22222344332 3679999999997652 1344666666654 2357
Q ss_pred CccEEEEcCCCCCchhHHH
Q 018289 75 PIPTIFIGGNHEASNYLWE 93 (358)
Q Consensus 75 pvpt~fI~GNHE~~~~l~e 93 (358)
+.|+++++||||......+
T Consensus 65 ~~~~~~vpGNHD~~~~~~~ 83 (301)
T COG1409 65 PAPVIVVPGNHDARVVNGE 83 (301)
T ss_pred CCceEeeCCCCcCCchHHH
Confidence 8899999999998755433
No 48
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=98.34 E-value=5.1e-07 Score=87.02 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=47.8
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
|+|+|+||+||+++++.+.++.+.-. .+.|.|+++||+..-... .++. .+++.. .+..+++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~--~~~D~li~lGDlVdrGp~-s~~v-------------l~~l~~---l~~~~~~ 61 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFD--PAKDTLWLVGDLVNRGPD-SLEV-------------LRFVKS---LGDSAVT 61 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCC--CCCCEEEEeCCccCCCcC-HHHH-------------HHHHHh---cCCCeEE
Confidence 89999999999999988776654211 258999999999864432 2221 223221 2346789
Q ss_pred EcCCCCCc
Q 018289 81 IGGNHEAS 88 (358)
Q Consensus 81 I~GNHE~~ 88 (358)
|.||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999864
No 49
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.34 E-value=1.5e-05 Score=71.83 Aligned_cols=175 Identities=22% Similarity=0.304 Sum_probs=103.3
Q ss_pred CEEEEEcCCCC-----------------ChHHHHHHHHHHHHhcCCCccEEEEecCccc-cCCcchhhhccchhhhHhhh
Q 018289 1 MRIAVEGCMHG-----------------ELDNVYKTLQYMENINSYKIDLLLCCGDFQA-VRNENDMESLNVPRKYREMK 62 (358)
Q Consensus 1 MkIlv~GD~HG-----------------~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~-~~n~~dl~~~~~p~k~~~l~ 62 (358)
|+|..+.|.|- ..++|.+ ....+- .+-|.|++.||+.= .+=... ..
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k---~W~~~v-~~eDiVllpGDiSWaM~l~ea------------~~ 64 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKK---HWRSKV-SPEDIVLLPGDISWAMRLEEA------------EE 64 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHH---HHHhcC-ChhhEEEecccchhheechhh------------hh
Confidence 88889999883 2334432 222222 26799999999852 221110 12
Q ss_pred HHHHHhcCCCCCCccEEEEcCCCCCc-hhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCC
Q 018289 63 SFWKYYSGQEVAPIPTIFIGGNHEAS-NYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPP 141 (358)
Q Consensus 63 ~F~~y~~g~~~~pvpt~fI~GNHE~~-~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~P 141 (358)
|| +++ ...|=..|.|.||||-= .....+.. -+-|-++|+.+ + +.+..+-|+|.-|=..+ .+...|
T Consensus 65 Dl-~~i---~~LPG~K~m~rGNHDYWw~s~skl~n--~lp~~l~~~n~-~-f~l~n~aI~G~RgW~s~------~~~~e~ 130 (230)
T COG1768 65 DL-RFI---GDLPGTKYMIRGNHDYWWSSISKLNN--ALPPILFYLNN-G-FELLNYAIVGVRGWDSP------SFDSEP 130 (230)
T ss_pred hh-hhh---hcCCCcEEEEecCCccccchHHHHHh--hcCchHhhhcc-c-eeEeeEEEEEeecccCC------CCCcCc
Confidence 22 243 33566789999999852 11111211 13455666654 3 34555888887664432 123456
Q ss_pred CChhhHhhhhhhhhHHHHHH---hccCCCcc--EEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHH
Q 018289 142 YNESTIRSVYHVREYDVHKL---MQIEEPID--IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEK 216 (358)
Q Consensus 142 y~~~~~~s~yh~re~dv~kL---~~~~~~vD--IlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~ 216 (358)
|++++-+-+ .||..--++ .+++++++ |++||-+|..-.. .++ ++.++++.
T Consensus 131 ~te~Deki~--~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~----------------------t~~-~~sevlee 185 (230)
T COG1768 131 LTEQDEKIF--LREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDG----------------------TPG-PFSEVLEE 185 (230)
T ss_pred cchhHHHHH--HHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCC----------------------CCc-chHHHHhh
Confidence 888775543 355543333 34455555 8899999975321 122 37899999
Q ss_pred hCCCEEEEcCCCCc
Q 018289 217 LKPSYWFSAHLHCK 230 (358)
Q Consensus 217 lkPrywfsGH~H~~ 230 (358)
-|+...+.||+|--
T Consensus 186 ~rv~~~lyGHlHgv 199 (230)
T COG1768 186 GRVSKCLYGHLHGV 199 (230)
T ss_pred cceeeEEeeeccCC
Confidence 99999999999954
No 50
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.34 E-value=1.5e-05 Score=74.75 Aligned_cols=112 Identities=19% Similarity=0.136 Sum_probs=65.3
Q ss_pred CEEEEEcCCCCCh---------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCC
Q 018289 1 MRIAVEGCMHGEL---------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQ 71 (358)
Q Consensus 1 MkIlv~GD~HG~l---------d~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~ 71 (358)
++|+.++|+||.+ ..+...++++++. + +-.+++..||+.......++ .+.+.+-+.+
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~-~-~~~l~v~~GD~~~~~~~~~~------~~~~~~~~~l------ 66 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAE-N-ENTLLLDAGDNFDGSPPSTA------TKGEANIELM------ 66 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhc-C-CCeEEEeCCccCCCccchhc------cCCcHHHHHH------
Confidence 5899999999776 4555556655443 2 33488999999764332221 1112222222
Q ss_pred CCCCccEEEEcCCCCCch---hHHHHh-h--CCccCCcEEEeC---------CceEEEEcCEEEEEEeCcc
Q 018289 72 EVAPIPTIFIGGNHEASN---YLWELY-Y--GGWAAPNIYFLG---------FAGVVKFGNIRIGGLSGIY 127 (358)
Q Consensus 72 ~~~pvpt~fI~GNHE~~~---~l~el~-~--gg~va~NI~yLg---------~~gv~~i~GlrIaGlsGi~ 127 (358)
+.+. ..+++.||||... .+.+.. . ..+++.|+.+-+ ..-+++++|+|||-+|-..
T Consensus 67 ~~~g-~d~~~~GNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~ 136 (252)
T cd00845 67 NALG-YDAVTIGNHEFDYGLDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTT 136 (252)
T ss_pred HhcC-CCEEeeccccccccHHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEecc
Confidence 2233 3567789999652 222222 1 235677887543 1346788999998766543
No 51
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=98.27 E-value=1.1e-06 Score=82.40 Aligned_cols=73 Identities=16% Similarity=0.177 Sum_probs=47.6
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHh-------cCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCC
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENI-------NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEV 73 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k-------~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~ 73 (358)
|||+|+||+||+++++.+.++.+.-. .+.+.|.+|++||+..-... -.++ .+++....
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~-s~ev-------------l~~l~~l~- 65 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD-SPEV-------------LRLVMSMV- 65 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC-HHHH-------------HHHHHHHh-
Confidence 89999999999999998877765221 11147999999999864322 1121 12222111
Q ss_pred CCccEEEEcCCCCCc
Q 018289 74 APIPTIFIGGNHEAS 88 (358)
Q Consensus 74 ~pvpt~fI~GNHE~~ 88 (358)
.+-.+++|.||||..
T Consensus 66 ~~~~~~~v~GNHE~~ 80 (234)
T cd07423 66 AAGAALCVPGNHDNK 80 (234)
T ss_pred hCCcEEEEECCcHHH
Confidence 122478999999853
No 52
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.26 E-value=6.4e-05 Score=71.93 Aligned_cols=223 Identities=15% Similarity=0.092 Sum_probs=110.5
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEE-ecCccccCCcchhhhccchhhhHhhhH
Q 018289 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLC-CGDFQAVRNENDMESLNVPRKYREMKS 63 (358)
Q Consensus 1 MkIlv~GD~HG~ld----------------~i~~~v~~~~~k~g~~~DllI~-~GDf~~~~n~~dl~~~~~p~k~~~l~~ 63 (358)
++|+.++|+||.+. .+...++++.++ ..|+|++ +||++......++..-.-+.|...+-+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~---~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~ 77 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAE---NPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIA 77 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhc---CCCeEEEeCCccCCccHHHHHhhhcccCCCChHHH
Confidence 58999999999863 344444444433 3577776 999975432111100000001111222
Q ss_pred HHHHhcCCCCCCccEEEEcCCCCCc---hhHHHHh---hCCccCCcEEEeC-------CceEEEEc-CEEEEEEeCccCC
Q 018289 64 FWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLG-------FAGVVKFG-NIRIGGLSGIYNA 129 (358)
Q Consensus 64 F~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~---~gg~va~NI~yLg-------~~gv~~i~-GlrIaGlsGi~~~ 129 (358)
.++ .+.+ .+++.||||.. ..+.+.. .-.+++.|+++.. ..-+++++ |+|||-+|-....
T Consensus 78 ~ln------~~g~-d~~~lGNHe~d~g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~ 150 (277)
T cd07410 78 AMN------ALGY-DAGTLGNHEFNYGLDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQ 150 (277)
T ss_pred HHH------hcCC-CEEeecccCcccCHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcc
Confidence 222 2343 36677999965 2333333 2247888998764 22456789 9999987654322
Q ss_pred cc-CCCC-CCCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCc
Q 018289 130 RH-YRLG-HYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGS 207 (358)
Q Consensus 130 ~~-y~~~-~~e~~Py~~~~~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS 207 (358)
.. +..+ ......+... +.++ +..+.+|.+...++=|+|+|..-..-.. ......
T Consensus 151 ~~~~~~~~~~~~~~~~d~-~~~~----~~~v~~lr~~~~D~IIvl~H~g~~~~~~-------------------~~~~~~ 206 (277)
T cd07410 151 IPNWEKPNLIGGLKFTDP-VETA----KKYVPKLRAEGADVVVVLAHGGFERDLE-------------------ESLTGE 206 (277)
T ss_pred cccccCcccCCCcEEcCH-HHHH----HHHHHHHHHcCCCEEEEEecCCcCCCcc-------------------cccCCc
Confidence 11 1100 0011112111 1111 1113344332234446888874332110 001222
Q ss_pred HHHHHHHHHh-CCCEEEEcCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018289 208 EPAAQLLEKL-KPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (358)
Q Consensus 208 ~~l~~ll~~l-kPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~ 265 (358)
....+|++++ .....++||-|..+.... ...|..+. .+..-+++..++|.
T Consensus 207 ~~~~~la~~~~~vD~IlgGHsH~~~~~~~-----~~~~~v~q---~g~~g~~vg~l~l~ 257 (277)
T cd07410 207 NAAYELAEEVPGIDAILTGHQHRRFPGPT-----VNGVPVVQ---PGNWGSHLGVIDLT 257 (277)
T ss_pred cHHHHHHhcCCCCcEEEeCCCccccccCC-----cCCEEEEc---CChhhCEEEEEEEE
Confidence 3345666663 568899999998875421 11344443 33455677777664
No 53
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.22 E-value=1.6e-05 Score=73.04 Aligned_cols=42 Identities=29% Similarity=0.331 Sum_probs=34.2
Q ss_pred EEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceeec
Q 018289 170 IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQ 236 (358)
Q Consensus 170 IlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~ 236 (358)
|++||.++... +.+.+.+++.+++|...|+||.|...-....
T Consensus 112 i~lsH~P~~~~-------------------------~~~~~~~~~~~~~p~~Ifs~H~H~s~~~~~~ 153 (195)
T cd08166 112 IMLSHVPLLAE-------------------------GGQALKHVVTDLDPDLIFSAHRHKSSIFMYD 153 (195)
T ss_pred eeeeccccccc-------------------------ccHHHHHHHHhcCceEEEEcCccceeeEEee
Confidence 99999998642 2236889999999999999999988766543
No 54
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.22 E-value=3e-06 Score=84.99 Aligned_cols=78 Identities=28% Similarity=0.429 Sum_probs=53.2
Q ss_pred CEEEEEcCCCCC---------hHH----HHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHH
Q 018289 1 MRIAVEGCMHGE---------LDN----VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (358)
Q Consensus 1 MkIlv~GD~HG~---------ld~----i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y 67 (358)
|||+.++|+|=. .+. +.+.++.+.+ ..+|+||++||+|...+..- +.+..|.+.
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~---~~vD~vliAGDlFd~~~Ps~----------~a~~~~~~~ 67 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKE---EKVDFVLIAGDLFDTNNPSP----------RALKLFLEA 67 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHH---ccCCEEEEccccccCCCCCH----------HHHHHHHHH
Confidence 999999999954 222 2233332222 26899999999997654321 234455556
Q ss_pred hcCCCCCCccEEEEcCCCCCchhH
Q 018289 68 YSGQEVAPIPTIFIGGNHEASNYL 91 (358)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~~~l 91 (358)
+.-...+.+|+|.|.||||....+
T Consensus 68 l~~l~~~~Ipv~~I~GNHD~~~~~ 91 (390)
T COG0420 68 LRRLKDAGIPVVVIAGNHDSPSRL 91 (390)
T ss_pred HHHhccCCCcEEEecCCCCchhcc
Confidence 555666889999999999988543
No 55
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=98.22 E-value=2.4e-06 Score=78.40 Aligned_cols=67 Identities=24% Similarity=0.172 Sum_probs=45.5
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
+||+|+||+||+++++.+.++.+..+ .+.|.+|++||+...... ..+ ..+++.. ..+++
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~--~~~d~~~~~GD~v~~g~~-~~~-------------~~~~l~~-----~~~~~ 59 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFD--PARDRLISVGDLIDRGPE-SLA-------------CLELLLE-----PWFHA 59 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCC--CCCCEEEEeCCcccCCCC-HHH-------------HHHHHhc-----CCEEE
Confidence 58999999999998887766544221 258999999999753322 111 1233321 25799
Q ss_pred EcCCCCCc
Q 018289 81 IGGNHEAS 88 (358)
Q Consensus 81 I~GNHE~~ 88 (358)
|.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999965
No 56
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.16 E-value=5e-06 Score=78.99 Aligned_cols=78 Identities=27% Similarity=0.360 Sum_probs=46.7
Q ss_pred CEEEEEcCCCCCh--------H---HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhc
Q 018289 1 MRIAVEGCMHGEL--------D---NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (358)
Q Consensus 1 MkIlv~GD~HG~l--------d---~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~ 69 (358)
|||+.++|+|-.- + ..++.+.....+ .++|+||++||++...+... + ....|.+++.
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~--~~~D~lli~GDi~d~~~p~~---------~-~~~~~~~~l~ 68 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKA--EQIDALLVAGDVFDTANPPA---------E-AQELFNAFFR 68 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHH--cCCCEEEECCccCCCCCCCH---------H-HHHHHHHHHH
Confidence 9999999999421 1 122222222222 26999999999997654321 1 1122333333
Q ss_pred CCCCC-CccEEEEcCCCCCchh
Q 018289 70 GQEVA-PIPTIFIGGNHEASNY 90 (358)
Q Consensus 70 g~~~~-pvpt~fI~GNHE~~~~ 90 (358)
..... ++|+++|.||||....
T Consensus 69 ~l~~~~~i~v~~i~GNHD~~~~ 90 (253)
T TIGR00619 69 NLSDANPIPIVVISGNHDSAQR 90 (253)
T ss_pred HHHhcCCceEEEEccCCCChhh
Confidence 33333 4899999999998644
No 57
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.13 E-value=0.00014 Score=70.37 Aligned_cols=222 Identities=14% Similarity=0.147 Sum_probs=110.1
Q ss_pred CEEEEEcCCCCChH--------------HHHHHHHHHHHhcCCCccEEEEecCccccCCc-chhhhccchhhhHhhhHHH
Q 018289 1 MRIAVEGCMHGELD--------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNE-NDMESLNVPRKYREMKSFW 65 (358)
Q Consensus 1 MkIlv~GD~HG~ld--------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~-~dl~~~~~p~k~~~l~~F~ 65 (358)
++|+.++|+||.+. .+...++++.++ + +-.+++.+||++..... ..+. +-..+-+.+
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~-~-~~~l~ld~GD~~~gs~~~s~~~------~g~~~~~~~ 72 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQ-N-PNSLFVSAGDLIGASPFESALL------QDEPTIEAL 72 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhc-C-CCeEEEeCCcccccccchhhcc------cCCcHHHHH
Confidence 58999999998754 344445554433 2 45699999998743211 1110 000111111
Q ss_pred HHhcCCCCCCccEEEEcCCCCCc---hhHHHHhh-------------------CCccCCcEEEeC-------CceEEEEc
Q 018289 66 KYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY-------------------GGWAAPNIYFLG-------FAGVVKFG 116 (358)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~-------------------gg~va~NI~yLg-------~~gv~~i~ 116 (358)
..+.+- +++.||||.. ..+.+... -.+++.|+++-. ..-+++++
T Consensus 73 ------n~~g~D-a~t~GNHefd~G~~~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~ 145 (288)
T cd07412 73 ------NAMGVD-ASAVGNHEFDEGYAELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVG 145 (288)
T ss_pred ------HhhCCe-eeeecccccccCHHHHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEEC
Confidence 223443 5677999964 33443322 137888988643 33456789
Q ss_pred CEEEEEEeCccCCccC--CCCCCCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhcc
Q 018289 117 NIRIGGLSGIYNARHY--RLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQ 194 (358)
Q Consensus 117 GlrIaGlsGi~~~~~y--~~~~~e~~Py~~~~~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp 194 (358)
|+|||-+|=......+ .....+..-|.. .+.++ +..+.+|.+-..++=|+|+|.--..-...++
T Consensus 146 G~kIgviGl~~~~~~~~~~~~~~~g~~f~d-~~e~~----~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--------- 211 (288)
T cd07412 146 GVKVGFIGAVTKDTPNLVSPDGVAGLEFTD-EVEAI----NAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--------- 211 (288)
T ss_pred CEEEEEEeecCCCccceeccccccCceEcC-HHHHH----HHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc---------
Confidence 9999877654332111 111111222221 11111 1123344432233445679954322111000
Q ss_pred chhhcccCCCCCcHHHHHHHHHh--CCCEEEEcCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018289 195 YFEKEIQDGTLGSEPAAQLLEKL--KPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (358)
Q Consensus 195 ~f~~~i~~~~lGS~~l~~ll~~l--kPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~ 265 (358)
.....| ...+++.++ .....++||.|..+..... ....|..+.- +..-+++..++|.
T Consensus 212 ------~~~~~~--~~~~l~~~~~~~iD~IlgGHsH~~~~~~~~---~~~~~~v~q~---g~~g~~vg~i~l~ 270 (288)
T cd07412 212 ------CSAASG--PIADIVNRLDPDVDVVFAGHTHQAYNCTVP---AGNPRLVTQA---GSYGKAVADVDLT 270 (288)
T ss_pred ------ccccCh--hHHHHHhhcCCCCCEEEeCccCcccccccc---CcCCEEEEec---ChhhceeEEEEEE
Confidence 001112 235666666 4589999999998864210 0123444333 3345677777764
No 58
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.13 E-value=0.00031 Score=66.74 Aligned_cols=207 Identities=15% Similarity=0.103 Sum_probs=107.6
Q ss_pred CEEEEEcCCC----------CChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcC
Q 018289 1 MRIAVEGCMH----------GELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSG 70 (358)
Q Consensus 1 MkIlv~GD~H----------G~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g 70 (358)
++|+-+.|+| |.+..+...++++.++ + +-.+++.+||+.......++. +.+.+-+.++
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~-~-~~~l~l~~GD~~~g~~~~~~~------~g~~~~~~l~---- 68 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE-N-PNTLVLFSGDVLSPSLLSTAT------KGKQMVPVLN---- 68 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhc-C-CCEEEEECCCccCCccchhhc------CCccHHHHHH----
Confidence 4788889999 3456666666665543 2 334999999987543221111 0111222222
Q ss_pred CCCCCccEEEEcCCCCCc---hhHHHHhh---CCccCCcEEEeCC---------ceEEEEcCEEEEEEeCccCCccCC-C
Q 018289 71 QEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLGF---------AGVVKFGNIRIGGLSGIYNARHYR-L 134 (358)
Q Consensus 71 ~~~~pvpt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg~---------~gv~~i~GlrIaGlsGi~~~~~y~-~ 134 (358)
...+ .+.+.||||.. ..+.+... -.+++.|+++-+. .-+++.+|+|||-+|=........ .
T Consensus 69 --~l~~-d~~~~GNHefd~g~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~ 145 (257)
T cd07406 69 --ALGV-DLACFGNHEFDFGEDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLT 145 (257)
T ss_pred --hcCC-cEEeecccccccCHHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEeccccccccc
Confidence 1232 47789999964 23333331 2478888876432 345678999998776443321100 0
Q ss_pred CCCCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHH
Q 018289 135 GHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLL 214 (358)
Q Consensus 135 ~~~e~~Py~~~~~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll 214 (358)
.......|.. ...++ +..+..+.+-..++=|+|||..-. . -.+++
T Consensus 146 ~~~~~~~~~d-~~~~~----~~~v~~~~~~~~D~iVvl~H~g~~-----~-------------------------d~~la 190 (257)
T cd07406 146 IDPEYVRYRD-YVETA----RELVDELREQGADLIIALTHMRLP-----N-------------------------DKRLA 190 (257)
T ss_pred CCCCcceEcC-HHHHH----HHHHHHHHhCCCCEEEEEeccCch-----h-------------------------hHHHH
Confidence 1111222321 11111 112333333334556788887421 0 01334
Q ss_pred HHh-CCCEEEEcCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018289 215 EKL-KPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (358)
Q Consensus 215 ~~l-kPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~~ 266 (358)
+++ .-...++||.|..+...+. .|..+ +++..-+++-.++|.-
T Consensus 191 ~~~~~iD~IlgGH~H~~~~~~~~------~t~vv---~~g~~g~~vg~l~l~~ 234 (257)
T cd07406 191 REVPEIDLILGGHDHEYILVQVG------GTPIV---KSGSDFRTVYIITLTY 234 (257)
T ss_pred HhCCCCceEEecccceeEeeeEC------CEEEE---eCCcCcceEEEEEEEE
Confidence 433 3568899999988744332 24333 3344556777777653
No 59
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.10 E-value=1.2e-05 Score=81.64 Aligned_cols=80 Identities=28% Similarity=0.396 Sum_probs=47.9
Q ss_pred CEEEEEcCCCCC------------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHh
Q 018289 1 MRIAVEGCMHGE------------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (358)
Q Consensus 1 MkIlv~GD~HG~------------ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~ 68 (358)
|||++++|+|-. ++.+-+.++.+ .+ .++|+||++||++...... ..++ ++-|..+.+|.
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a-~~--~~vD~VLiaGDLFd~~~Ps-~~~~-----~~~~~~lr~~~ 74 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIA-KE--QDVDMILLGGDLFHENKPS-RKSL-----YQVLRSLRLYC 74 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHH-HH--cCCCEEEECCccCCCCCCC-HHHH-----HHHHHHHHHhh
Confidence 899999999943 11222222222 22 2699999999999654322 1222 22334444332
Q ss_pred cC-----------------------------CCCCCccEEEEcCCCCCch
Q 018289 69 SG-----------------------------QEVAPIPTIFIGGNHEASN 89 (358)
Q Consensus 69 ~g-----------------------------~~~~pvpt~fI~GNHE~~~ 89 (358)
-| ...+.+|++.|.||||.+.
T Consensus 75 ~g~~p~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 75 LGDKPCELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred ccCCccchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 11 1125799999999999975
No 60
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.09 E-value=1.1e-05 Score=73.69 Aligned_cols=112 Identities=15% Similarity=0.029 Sum_probs=58.9
Q ss_pred EEEcCCCCCh--HHHHHHHHHHHHhc-CCCccEEEEecCccccCCcchhhhccchhhhHh-hhHHHHHhcCCCCCCccEE
Q 018289 4 AVEGCMHGEL--DNVYKTLQYMENIN-SYKIDLLLCCGDFQAVRNENDMESLNVPRKYRE-MKSFWKYYSGQEVAPIPTI 79 (358)
Q Consensus 4 lv~GD~HG~l--d~i~~~v~~~~~k~-g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~-l~~F~~y~~g~~~~pvpt~ 79 (358)
++++|+|-.- .........+.... ..++|.|+++||++..+...+.. .+..+.+ +..+.+. .....+++
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~---~~~~~~~~~~~l~~~----~~~~~~v~ 73 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEV---VPPAAHEVLAALLRL----ADRGTRVY 73 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCC---CChHHHHHHHHHHHH----HHCCCeEE
Confidence 4789999321 11111122221111 12689999999999754332211 1111222 1333332 23567899
Q ss_pred EEcCCCCCchhHHHHhhCCccCCcEEEeCCce-EEEEcCEEEEEEeCcc
Q 018289 80 FIGGNHEASNYLWELYYGGWAAPNIYFLGFAG-VVKFGNIRIGGLSGIY 127 (358)
Q Consensus 80 fI~GNHE~~~~l~el~~gg~va~NI~yLg~~g-v~~i~GlrIaGlsGi~ 127 (358)
+|.||||..-.-.... ...+..+.... .++++|.++...-|-.
T Consensus 74 ~v~GNHD~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~HG~~ 117 (217)
T cd07398 74 YVPGNHDFLLGDFFAE-----ELGLILLPDPLVHLELDGKRILLEHGDQ 117 (217)
T ss_pred EECCCchHHHHhHHHH-----HcCCEEeccceEEEeeCCeEEEEECCCc
Confidence 9999998642111111 11223344445 6788999999988853
No 61
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.04 E-value=1.1e-05 Score=81.75 Aligned_cols=96 Identities=17% Similarity=0.114 Sum_probs=52.8
Q ss_pred CEEEEEcCCCCC--h---------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhc
Q 018289 1 MRIAVEGCMHGE--L---------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYS 69 (358)
Q Consensus 1 MkIlv~GD~HG~--l---------d~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~ 69 (358)
|||+.++|+|-. + ..+.+.+..+-.+ .++|+||++||++...+..... ...+.+|...
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~--~~~D~viIaGDifD~~~p~~~a-------~~~~~~~l~~-- 69 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQE--HQVDAIIVAGDIFDTGSPPSYA-------RELYNRFVVN-- 69 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHh--cCCCEEEECCccccCCCCcHHH-------HHHHHHHHHH--
Confidence 999999999942 1 1112222222122 2699999999998654321100 0112334333
Q ss_pred CCCCCCccEEEEcCCCCCchhHHHHhhCCccCCcEEEeCC
Q 018289 70 GQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGF 109 (358)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~ 109 (358)
....++|+++|.||||....+.... .-.-..||+.++.
T Consensus 70 -L~~~~~~v~~I~GNHD~~~~l~~~~-~~l~~~gi~vl~~ 107 (407)
T PRK10966 70 -LQQTGCQLVVLAGNHDSVATLNESR-DLLAFLNTTVIAS 107 (407)
T ss_pred -HHhcCCcEEEEcCCCCChhhhhhHH-HHHHHCCcEEEec
Confidence 3345689999999999875542211 0001346666654
No 62
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.02 E-value=0.00064 Score=65.50 Aligned_cols=112 Identities=17% Similarity=0.068 Sum_probs=62.4
Q ss_pred CEEEEEcCCCCCh---------------------HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhH
Q 018289 1 MRIAVEGCMHGEL---------------------DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYR 59 (358)
Q Consensus 1 MkIlv~GD~HG~l---------------------d~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~ 59 (358)
++|+-++|+||.+ ..+...++++.++ + +--+++-+||++......++. +-.
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~-~-~~~l~ld~GD~~~gs~~~~~~------~g~ 72 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAE-N-PNVLFLNAGDAFQGTLWYTLY------KGN 72 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhc-C-CCEEEEeCCCCCCCcchhhhc------CCh
Confidence 5799999999864 3444455554433 2 333666699987543222110 011
Q ss_pred hhhHHHHHhcCCCCCCccEEEEcCCCCCc---hhHHHHh---hCCccCCcEEEeCC----------ceEEEEcCEEEEEE
Q 018289 60 EMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLGF----------AGVVKFGNIRIGGL 123 (358)
Q Consensus 60 ~l~~F~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~---~gg~va~NI~yLg~----------~gv~~i~GlrIaGl 123 (358)
.+-+.+ ..+.+.. ++.||||.. ..+.+.. ...+++.|++.-.. .-+++++|+|||-+
T Consensus 73 ~~~~~l------n~~g~D~-~~lGNHefd~G~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgvi 145 (281)
T cd07409 73 ADAEFM------NLLGYDA-MTLGNHEFDDGVEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGII 145 (281)
T ss_pred HHHHHH------HhcCCCE-EEeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEE
Confidence 122222 2345554 455899976 2333332 23477888875432 24567899999877
Q ss_pred eCcc
Q 018289 124 SGIY 127 (358)
Q Consensus 124 sGi~ 127 (358)
|=..
T Consensus 146 G~~~ 149 (281)
T cd07409 146 GYTT 149 (281)
T ss_pred EEec
Confidence 6444
No 63
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=98.01 E-value=7.4e-06 Score=76.03 Aligned_cols=67 Identities=21% Similarity=0.245 Sum_probs=46.1
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
+||+|+||+||+++++.+.++.+..+ ...|.|||+||+..-.. ...++ .+++.. . ..++
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~--~~~D~li~lGDlvDrGp-~s~~v-------------l~~l~~---~--~~~~ 75 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFD--PWRDLLISVGDLIDRGP-QSLRC-------------LQLLEE---H--WVRA 75 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCC--cccCEEEEcCcccCCCc-CHHHH-------------HHHHHc---C--CceE
Confidence 48999999999999998888776332 25799999999975332 22222 223321 1 2578
Q ss_pred EcCCCCCc
Q 018289 81 IGGNHEAS 88 (358)
Q Consensus 81 I~GNHE~~ 88 (358)
|.||||..
T Consensus 76 v~GNHE~~ 83 (218)
T PRK11439 76 VRGNHEQM 83 (218)
T ss_pred eeCchHHH
Confidence 99999854
No 64
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=97.97 E-value=1.1e-05 Score=76.38 Aligned_cols=73 Identities=14% Similarity=0.151 Sum_probs=46.9
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhc------CCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCC
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENIN------SYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVA 74 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~------g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~ 74 (358)
||++|+||+||.++.+.+.++++.-.. ...-|.||++||+..-. ....+++ +|+.... .
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRG-p~S~~vl-------------~~~~~~~-~ 65 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRG-PHSLRMI-------------EIVWELV-E 65 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCC-cChHHHH-------------HHHHHHh-h
Confidence 899999999999999888776643210 01358999999998533 2222222 1211111 1
Q ss_pred CccEEEEcCCCCCc
Q 018289 75 PIPTIFIGGNHEAS 88 (358)
Q Consensus 75 pvpt~fI~GNHE~~ 88 (358)
+-.+++|.||||..
T Consensus 66 ~~~~~~l~GNHE~~ 79 (245)
T PRK13625 66 KKAAYYVPGNHCNK 79 (245)
T ss_pred CCCEEEEeCccHHH
Confidence 23689999999853
No 65
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.96 E-value=0.00031 Score=66.68 Aligned_cols=111 Identities=21% Similarity=0.243 Sum_probs=64.4
Q ss_pred CEEEEEcCCCCChH----------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcC
Q 018289 1 MRIAVEGCMHGELD----------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSG 70 (358)
Q Consensus 1 MkIlv~GD~HG~ld----------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g 70 (358)
++|+.++|+||.+. .+-..++++.++ +-++++.+||++......++. +...+-+.+
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~---~~~l~l~~GD~~~gs~~~~~~------~g~~~~~~l----- 66 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL---DNDLLVDAGDAIQGLPISDLD------KGETIIKIM----- 66 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhc---CCEEEEeCCCcCCCchhhhhc------CCcHHHHHH-----
Confidence 58999999999753 344444444332 568999999997643221111 011121221
Q ss_pred CCCCCccEEEEcCCCCCc---hhHHHHh---hCCccCCcEEEeC-------CceEEEEc-CEEEEEEeCcc
Q 018289 71 QEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLG-------FAGVVKFG-NIRIGGLSGIY 127 (358)
Q Consensus 71 ~~~~pvpt~fI~GNHE~~---~~l~el~---~gg~va~NI~yLg-------~~gv~~i~-GlrIaGlsGi~ 127 (358)
....+. +++.||||.. ..+.+.. .-.+++.|++... ..-+++++ |+|||-+|-..
T Consensus 67 -n~~g~d-~~~~GNHefd~G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~ 135 (257)
T cd07408 67 -NAVGYD-AVTPGNHEFDYGLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTT 135 (257)
T ss_pred -HhcCCc-EEccccccccCCHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecC
Confidence 223433 4567999965 2232222 2347888998753 13455778 99998776543
No 66
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=97.95 E-value=7.3e-06 Score=76.23 Aligned_cols=66 Identities=30% Similarity=0.369 Sum_probs=44.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEE
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI 81 (358)
||+|+||+||+++++.+.++.+..+ .+.|.+||+||+..-... ..++ .+++. + + .+++|
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~--~~~d~l~~lGD~vdrG~~-~~~~-------------l~~l~---~-~-~~~~v 74 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFC--PETDLLISVGDNIDRGPE-SLNV-------------LRLLN---Q-P-WFISV 74 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCC--CCCCEEEECCCCcCCCcC-HHHH-------------HHHHh---h-C-CcEEE
Confidence 7999999999999988776654211 258999999999864322 1111 12321 1 1 36899
Q ss_pred cCCCCCc
Q 018289 82 GGNHEAS 88 (358)
Q Consensus 82 ~GNHE~~ 88 (358)
.||||..
T Consensus 75 ~GNHE~~ 81 (218)
T PRK09968 75 KGNHEAM 81 (218)
T ss_pred ECchHHH
Confidence 9999864
No 67
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.91 E-value=0.0016 Score=63.88 Aligned_cols=119 Identities=18% Similarity=0.114 Sum_probs=64.0
Q ss_pred CEEEEEcCCCCChH------HHHHHHHHHHHhc---CCCccEEEEecCccccCCcchhh--hccchhhhHhhhHHHHHhc
Q 018289 1 MRIAVEGCMHGELD------NVYKTLQYMENIN---SYKIDLLLCCGDFQAVRNENDME--SLNVPRKYREMKSFWKYYS 69 (358)
Q Consensus 1 MkIlv~GD~HG~ld------~i~~~v~~~~~k~---g~~~DllI~~GDf~~~~n~~dl~--~~~~p~k~~~l~~F~~y~~ 69 (358)
++|+-+.|+||.+. .+...++++.++. + +--+++-+||++......... ..+...+-+.+-+++..
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~-~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~-- 77 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEY-DNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNA-- 77 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccC-CCeEEEecCccccCchhhhhhccccccccCChHHHHHHhc--
Confidence 57999999999853 3433344443321 3 446999999976432111000 00000111223333333
Q ss_pred CCCCCCccEEEEcCCCCCc---hhHHHHhh---------CCccCCcEEEeC-----------------------CceEEE
Q 018289 70 GQEVAPIPTIFIGGNHEAS---NYLWELYY---------GGWAAPNIYFLG-----------------------FAGVVK 114 (358)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~---~~l~el~~---------gg~va~NI~yLg-----------------------~~gv~~ 114 (358)
+.+ =....||||.. ..|.++.. =.|++.||++-+ ..-+++
T Consensus 78 ----~g~-Da~tlGNHEFD~G~~~L~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~~~~~~~~~~~~~~~~~py~I~e 152 (313)
T cd08162 78 ----LGV-QAIALGNHEFDLGTDELADLIRPSAAGGGAAFPYLSANLDFSGDANLAGLATADGQQAAAIAGKIAKSTVVE 152 (313)
T ss_pred ----cCC-cEEeccccccccCHHHHHHHHHhhcccccCCCCEEEecccccCCcccccccccccccccccccccCCeEEEE
Confidence 222 25789999964 33433332 237888987532 223557
Q ss_pred EcCEEEEEEeCcc
Q 018289 115 FGNIRIGGLSGIY 127 (358)
Q Consensus 115 i~GlrIaGlsGi~ 127 (358)
++|+|||-+|-.-
T Consensus 153 ~~G~kIGviGltt 165 (313)
T cd08162 153 VGGEKIGVVGATT 165 (313)
T ss_pred ECCEEEEEEEecc
Confidence 8999998776543
No 68
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.87 E-value=0.0015 Score=63.17 Aligned_cols=193 Identities=16% Similarity=0.108 Sum_probs=97.5
Q ss_pred CEEEEEcCCCCChHH----------HHHHHHHHHHh---cCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHH
Q 018289 1 MRIAVEGCMHGELDN----------VYKTLQYMENI---NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (358)
Q Consensus 1 MkIlv~GD~HG~ld~----------i~~~v~~~~~k---~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y 67 (358)
++|+.++|+||.+.. +-..++++.++ .+ +--+++-+||++......++.. -..+-+++..
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~-~~~l~ld~GD~~~Gs~~~~~~~------g~~~~~~~n~ 73 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQG-GYVLLLSGGDINTGVPESDLQD------AEPDFRGMNL 73 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccC-CCEEEEeCCCcCCCchhHHhcC------cchHHHHHHh
Confidence 579999999997532 34444444332 13 4569999999874322222110 0112222222
Q ss_pred hcCCCCCCccEEEEcCCCCCc---hhHHHHh---hCCccCCcEEEeC------CceEEEEcCEEEEEEeCccCCccC--C
Q 018289 68 YSGQEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLG------FAGVVKFGNIRIGGLSGIYNARHY--R 133 (358)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~---~~l~el~---~gg~va~NI~yLg------~~gv~~i~GlrIaGlsGi~~~~~y--~ 133 (358)
+.+- ..+.||||.. ..|.+.. .-.+++.|+++-. ..-+++++|+|||-+|=....... .
T Consensus 74 ------~g~D-a~~~GNHEfD~G~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~ 146 (285)
T cd07405 74 ------VGYD-AMAVGNHEFDNPLEVLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGN 146 (285)
T ss_pred ------hCCc-EEeecccccccCHHHHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccC
Confidence 3444 3455999976 3333332 1247889998652 224557899999877654432221 1
Q ss_pred CCCCCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHH
Q 018289 134 LGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQL 213 (358)
Q Consensus 134 ~~~~e~~Py~~~~~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~l 213 (358)
....+...|.+. +.++ +..+..|.+...++=|+|||..-..-...+. . .+.-.++
T Consensus 147 ~~~~~~~~f~d~-~~~~----~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~~-----------------~---~~~~~~l 201 (285)
T cd07405 147 PAYFEGIEFRPP-IHEA----KEVVPELKQEKPDIVIAATHMGHYDNGEHGS-----------------N---APGDVEM 201 (285)
T ss_pred cCCcCCcEEcCH-HHHH----HHHHHHHHHcCCCEEEEEecccccCCccccc-----------------c---CchHHHH
Confidence 111112223211 1111 1113334332234446788865321110000 0 0112366
Q ss_pred HHHh---CCCEEEEcCCCCccc
Q 018289 214 LEKL---KPSYWFSAHLHCKFA 232 (358)
Q Consensus 214 l~~l---kPrywfsGH~H~~f~ 232 (358)
++++ .....+.||.|..+.
T Consensus 202 A~~~~~~giD~IigGHsH~~~~ 223 (285)
T cd07405 202 ARALPAGGLDLIVGGHSQDPVC 223 (285)
T ss_pred HHhcCCCCCCEEEeCCCCcccc
Confidence 6665 578999999999885
No 69
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=97.85 E-value=1.6e-05 Score=76.69 Aligned_cols=69 Identities=26% Similarity=0.295 Sum_probs=47.2
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
|++.|+||+||.++++.+.++++.-. ...|.++++||+..-.. ..++.+ +++.. .+...++
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~--~~~D~l~~lGDlVdRGP-~slevL-------------~~l~~---l~~~~~~ 61 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFD--PGQDTLWLTGDLVARGP-GSLEVL-------------RYVKS---LGDAVRL 61 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcC--CCCCEEEEeCCccCCCC-CHHHHH-------------HHHHh---cCCCeEE
Confidence 88999999999999998887766322 25799999999986432 222222 23221 1223568
Q ss_pred EcCCCCCc
Q 018289 81 IGGNHEAS 88 (358)
Q Consensus 81 I~GNHE~~ 88 (358)
|.||||..
T Consensus 62 VlGNHD~~ 69 (279)
T TIGR00668 62 VLGNHDLH 69 (279)
T ss_pred EEChhHHH
Confidence 99999863
No 70
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=97.83 E-value=0.00052 Score=66.08 Aligned_cols=191 Identities=17% Similarity=0.165 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEEcCCCCCchh---
Q 018289 14 DNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNY--- 90 (358)
Q Consensus 14 d~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI~GNHE~~~~--- 90 (358)
..+-+.++.+.+... ++|++|+.||+............ .+...+..+.+.+.. .-..+|++.+.||||....
T Consensus 53 ~l~~s~l~~i~~~~~-~~dfii~tGD~v~h~~~~~~~~~---~~~~~~~~~~~~l~~-~~~~~pv~~~~GNHD~~p~~~~ 127 (296)
T cd00842 53 RLVESALEAIKKNHP-KPDFILWTGDLVRHDVDEQTPET---LVLISISNLTSLLKK-AFPDTPVYPALGNHDSYPVNQF 127 (296)
T ss_pred HHHHHHHHHHHHhCC-CCCEEEEcCCCCCCCchhhchhH---HHHHHHHHHHHHHHH-hCCCCCEEEcCCCCCCCccccc
Confidence 344444555555443 79999999999875433211100 000012233333221 1146799999999998521
Q ss_pred --------HHHHh---hCCccCCc--EEEeCCce--EEE-EcCEEEEEEeCccCCcc--CCCCCCCCCCCChhhHhhhhh
Q 018289 91 --------LWELY---YGGWAAPN--IYFLGFAG--VVK-FGNIRIGGLSGIYNARH--YRLGHYERPPYNESTIRSVYH 152 (358)
Q Consensus 91 --------l~el~---~gg~va~N--I~yLg~~g--v~~-i~GlrIaGlsGi~~~~~--y~~~~~e~~Py~~~~~~s~yh 152 (358)
+.+.. .+.|+-.+ -.+. .+| ++. .+|+||.+|...+-... +..+.....| ...++-+
T Consensus 128 ~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~-~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~--~~Ql~WL-- 202 (296)
T cd00842 128 PPNNSPSWLYDALAELWKSWLPEEAEETFK-KGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDP--AGQLQWL-- 202 (296)
T ss_pred CCcccccHHHHHHHHHHHhhcCHHHHHHhh-cceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCH--HHHHHHH--
Confidence 11111 11111100 0011 122 234 58999999876542111 0000000001 1112111
Q ss_pred hhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhC--CCEEEEcCCCCc
Q 018289 153 VREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLK--PSYWFSAHLHCK 230 (358)
Q Consensus 153 ~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lk--PrywfsGH~H~~ 230 (358)
+..+++..+ ...-=++++|-+|....... ....+..+.+++++.+ ....|+||.|..
T Consensus 203 --~~~L~~a~~-~~~~v~I~~HiPp~~~~~~~------------------~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d 261 (296)
T cd00842 203 --EDELQEAEQ-AGEKVWIIGHIPPGVNSYDT------------------LENWSERYLQIINRYSDTIAGQFFGHTHRD 261 (296)
T ss_pred --HHHHHHHHH-CCCeEEEEeccCCCCccccc------------------chHHHHHHHHHHHHHHHhhheeeecccccc
Confidence 111222111 12223789999886432110 0123567888999887 788999999987
Q ss_pred cceee
Q 018289 231 FAAVV 235 (358)
Q Consensus 231 f~~~~ 235 (358)
.-...
T Consensus 262 ~~~~~ 266 (296)
T cd00842 262 EFRVF 266 (296)
T ss_pred eEEEE
Confidence 54443
No 71
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.82 E-value=3.3e-05 Score=71.32 Aligned_cols=75 Identities=25% Similarity=0.198 Sum_probs=46.5
Q ss_pred EEEcCCCCChHHHHHHHHHHHHh-----cCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccE
Q 018289 4 AVEGCMHGELDNVYKTLQYMENI-----NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (358)
Q Consensus 4 lv~GD~HG~ld~i~~~v~~~~~k-----~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt 78 (358)
.|+||+||+++++.+.++.+.-. ...+.|.|+++||+..-... ..+.+ .-+.+......+.+.++
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~-~~~vl---------~~l~~l~~~~~~~~~~v 70 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPD-VIEIL---------WLLYKLEQEAAKAGGKV 70 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcC-HHHHH---------HHHHHHHHHHHhcCCeE
Confidence 37999999999888777654210 01258999999999864322 22221 11222211122346789
Q ss_pred EEEcCCCCCc
Q 018289 79 IFIGGNHEAS 88 (358)
Q Consensus 79 ~fI~GNHE~~ 88 (358)
++|.||||..
T Consensus 71 ~~l~GNHE~~ 80 (208)
T cd07425 71 HFLLGNHELM 80 (208)
T ss_pred EEeeCCCcHH
Confidence 9999999954
No 72
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=97.81 E-value=5.7e-05 Score=73.43 Aligned_cols=74 Identities=19% Similarity=0.320 Sum_probs=47.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcC---CCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCc-c
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINS---YKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI-P 77 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g---~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pv-p 77 (358)
+|+++||+||+++.+.+.++.+....+ ...+.+|++||+..-.... .+ .-+|..- .....|. .
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS-~e----------Vld~L~~--l~~~~~~~~ 69 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPET-RK----------VIDFLIS--LPEKHPKQR 69 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCH-HH----------HHHHHHH--hhhcccccc
Confidence 589999999999998888777765422 2467899999998643221 11 1122211 1222222 4
Q ss_pred EEEEcCCCCCc
Q 018289 78 TIFIGGNHEAS 88 (358)
Q Consensus 78 t~fI~GNHE~~ 88 (358)
++|+.||||..
T Consensus 70 vv~LrGNHE~~ 80 (304)
T cd07421 70 HVFLCGNHDFA 80 (304)
T ss_pred eEEEecCChHH
Confidence 78999999964
No 73
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=97.81 E-value=3.5e-05 Score=70.76 Aligned_cols=68 Identities=26% Similarity=0.383 Sum_probs=44.7
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEEcC
Q 018289 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGG 83 (358)
Q Consensus 4 lv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI~G 83 (358)
.|+||+||+++.+.+.++.+.. .+.|.+|++||+..-.... .+ +-++... .+..|..+++|.|
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~---~~~d~li~lGD~vdrg~~~-~~----------~l~~l~~---~~~~~~~~~~l~G 63 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGF---PPNDKLIFLGDYVDRGPDS-VE----------VIDLLLA---LKILPDNVILLRG 63 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCC---CCCCEEEEECCEeCCCCCc-HH----------HHHHHHH---hcCCCCcEEEEcc
Confidence 3799999999888766655432 2689999999998643221 11 1122222 1112678999999
Q ss_pred CCCCc
Q 018289 84 NHEAS 88 (358)
Q Consensus 84 NHE~~ 88 (358)
|||..
T Consensus 64 NHe~~ 68 (225)
T cd00144 64 NHEDM 68 (225)
T ss_pred Cchhh
Confidence 99974
No 74
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=97.80 E-value=3.4e-05 Score=73.70 Aligned_cols=67 Identities=18% Similarity=0.217 Sum_probs=45.4
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEEc
Q 018289 3 IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIG 82 (358)
Q Consensus 3 Ilv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI~ 82 (358)
+.|+||+||+++++.+.++.+... .+.|.|+++||+..-... .++. .+++.... -.+++|.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~--~~~D~Li~lGDlVdRGp~-s~ev-------------l~~l~~l~---~~v~~Vl 61 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFD--PAKDRLWLVGDLVNRGPD-SLET-------------LRFVKSLG---DSAKTVL 61 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCC--CCCCEEEEecCcCCCCcC-HHHH-------------HHHHHhcC---CCeEEEc
Confidence 479999999999988877665322 257999999999874432 2222 22322221 2578999
Q ss_pred CCCCCc
Q 018289 83 GNHEAS 88 (358)
Q Consensus 83 GNHE~~ 88 (358)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999865
No 75
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=97.76 E-value=0.0016 Score=62.02 Aligned_cols=111 Identities=17% Similarity=0.223 Sum_probs=59.4
Q ss_pred CEEEEEcCCCCChHH----------------------HHHHHHHHHHhcCCCccEEE-EecCccccCCcchhhhccchhh
Q 018289 1 MRIAVEGCMHGELDN----------------------VYKTLQYMENINSYKIDLLL-CCGDFQAVRNENDMESLNVPRK 57 (358)
Q Consensus 1 MkIlv~GD~HG~ld~----------------------i~~~v~~~~~k~g~~~DllI-~~GDf~~~~n~~dl~~~~~p~k 57 (358)
+.|+.++|+||.+.. +...++++.++. ..|+|+ .+||+........+. +
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~--~~~~l~l~~GD~~~gs~~~~~~------~ 72 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAER--NPNTLLLDGGDTWQGSGEALYT------R 72 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhc--CCCeEEEeCCCccCCChHHhhc------C
Confidence 478999999997533 223333333221 467774 599998543221111 1
Q ss_pred hHhhhHHHHHhcCCCCCCccEEEEcCCCCCc---hhHHHHh---hCCccCCcEEEeCC-------ceEEEEcCEEEEEEe
Q 018289 58 YREMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFLGF-------AGVVKFGNIRIGGLS 124 (358)
Q Consensus 58 ~~~l~~F~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~---~gg~va~NI~yLg~-------~gv~~i~GlrIaGls 124 (358)
...+-+.+ ...++- .+. ||||.. ..+.++. .-.+++.|+++-.. .-+++.+|+|||-+|
T Consensus 73 g~~~~~~l------~~~g~d-a~~-GNHefd~g~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG 144 (264)
T cd07411 73 GQAMVDAL------NALGVD-AMV-GHWEFTYGPERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIG 144 (264)
T ss_pred ChhHHHHH------HhhCCe-EEe-cccccccCHHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEE
Confidence 11222222 223433 333 999965 2232222 22478889876431 235577999998666
Q ss_pred Ccc
Q 018289 125 GIY 127 (358)
Q Consensus 125 Gi~ 127 (358)
-..
T Consensus 145 ~~~ 147 (264)
T cd07411 145 QTF 147 (264)
T ss_pred ecc
Confidence 543
No 76
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=97.75 E-value=5.1e-05 Score=70.73 Aligned_cols=70 Identities=17% Similarity=0.120 Sum_probs=44.9
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcC-----CCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccE
Q 018289 4 AVEGCMHGELDNVYKTLQYMENINS-----YKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (358)
Q Consensus 4 lv~GD~HG~ld~i~~~v~~~~~k~g-----~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt 78 (358)
.|+||+||.++++.+.++.+..... .+.|.||++||+..-... ..+. .+++..... +-.+
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~-S~~v-------------l~~l~~l~~-~~~~ 66 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPE-IREL-------------LEIVKSMVD-AGHA 66 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCC-HHHH-------------HHHHHHhhc-CCCE
Confidence 5899999999999888777643211 146899999999753322 1111 222222221 2268
Q ss_pred EEEcCCCCCc
Q 018289 79 IFIGGNHEAS 88 (358)
Q Consensus 79 ~fI~GNHE~~ 88 (358)
++|.||||..
T Consensus 67 ~~l~GNHE~~ 76 (222)
T cd07413 67 LAVMGNHEFN 76 (222)
T ss_pred EEEEccCcHH
Confidence 9999999954
No 77
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.68 E-value=0.001 Score=75.86 Aligned_cols=191 Identities=20% Similarity=0.187 Sum_probs=99.5
Q ss_pred CEEEEEcCCCCCh---HHHHHHHHHHHHhcCCCccEEEE-ecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCc
Q 018289 1 MRIAVEGCMHGEL---DNVYKTLQYMENINSYKIDLLLC-CGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (358)
Q Consensus 1 MkIlv~GD~HG~l---d~i~~~v~~~~~k~g~~~DllI~-~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pv 76 (358)
++|+.++|+||.+ ..+...++++.++ ..|+|++ +||++.......+. +...+-+++.. ..+
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~---~~~~l~ld~GD~~~gs~~~~~~------~g~~~~~~ln~------lg~ 725 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEE---NPNTILVDAGDVYQGSLYSNLL------KGLPVLKMMKE------MGY 725 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhh---CCCeEEEecCCCCCCcchhhhc------CChHHHHHHhC------cCC
Confidence 4799999999875 4555555555443 3577766 99987543211110 11122222222 222
Q ss_pred cEEEEcCCCCCc---hhHHHHhh---------------CCccCCcEEEeC---------CceEEEEcCEEEEEEeCccCC
Q 018289 77 PTIFIGGNHEAS---NYLWELYY---------------GGWAAPNIYFLG---------FAGVVKFGNIRIGGLSGIYNA 129 (358)
Q Consensus 77 pt~fI~GNHE~~---~~l~el~~---------------gg~va~NI~yLg---------~~gv~~i~GlrIaGlsGi~~~ 129 (358)
-+++.||||.. ..+.+... -.|++.||++-. ..-+++++|+|||.+|=+-..
T Consensus 726 -d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~ 804 (1163)
T PRK09419 726 -DASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPE 804 (1163)
T ss_pred -CEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccc
Confidence 36689999954 23333221 137889998632 234557899999877654322
Q ss_pred ccCC--CCCCCCCCCChhhHhhhhhhhhHHHHHHhccCCCcc--EEEeCCCCCCcccCCcchhhhhhccchhhcccCCCC
Q 018289 130 RHYR--LGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPID--IFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTL 205 (358)
Q Consensus 130 ~~y~--~~~~e~~Py~~~~~~s~yh~re~dv~kL~~~~~~vD--IlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~l 205 (358)
.... ..+....-|... +.++ +..+.+|.. ..++| |+|||..-..- . ..
T Consensus 805 ~~~~~~p~~~~~l~f~d~-~e~~----~~~v~~Lr~-~~~~D~VV~LsH~G~~~d---~-------------------~~ 856 (1163)
T PRK09419 805 TAYKTSPGNVKNLEFKDP-AEAA----KKWVKELKE-KEKVDAIIALTHLGSNQD---R-------------------TT 856 (1163)
T ss_pred cccccCCCCcCCcEEcCH-HHHH----HHHHHHHHh-hcCCCEEEEEecCCcccc---c-------------------cc
Confidence 1111 111112223221 1111 111333431 13455 78899853210 0 01
Q ss_pred CcHHHHHHHHHh-CCCEEEEcCCCCccceee
Q 018289 206 GSEPAAQLLEKL-KPSYWFSAHLHCKFAAVV 235 (358)
Q Consensus 206 GS~~l~~ll~~l-kPrywfsGH~H~~f~~~~ 235 (358)
|.-...+|++++ .-...+.||.|..+...+
T Consensus 857 ~~~~~~~lA~~v~gIDvIigGHsH~~~~~~v 887 (1163)
T PRK09419 857 GEITGLELAKKVKGVDAIISAHTHTLVDKVV 887 (1163)
T ss_pred cccHHHHHHHhCCCCCEEEeCCCCccccccC
Confidence 112245677666 457899999998886543
No 78
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=97.56 E-value=0.00081 Score=64.39 Aligned_cols=236 Identities=17% Similarity=0.195 Sum_probs=127.8
Q ss_pred CEEEEEcCCC--CChHHHH--HHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCc
Q 018289 1 MRIAVEGCMH--GELDNVY--KTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPI 76 (358)
Q Consensus 1 MkIlv~GD~H--G~ld~i~--~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pv 76 (358)
++++|+||.- |.++.-. ..+..+-++. .+|.||-.||=+......+.. .| +=-..|..-|+.- ....
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l--~idfvlS~GDNfYd~G~~~~~---Dp---~Fq~sF~nIYT~p-SLQk 114 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKL--DIDFVLSTGDNFYDTGLTSEN---DP---RFQDSFENIYTAP-SLQK 114 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhc--cceEEEecCCcccccCCCCCC---Ch---hHHhhhhhcccCc-cccc
Confidence 4789999974 5554322 2233344444 599999999965432222211 11 1123465666542 2446
Q ss_pred cEEEEcCCCCCchhH-HHH------hhCCccCCcEEEeCCceEEEEcCE--EEEE---EeCccCC-ccCCCCCCCCCCCC
Q 018289 77 PTIFIGGNHEASNYL-WEL------YYGGWAAPNIYFLGFAGVVKFGNI--RIGG---LSGIYNA-RHYRLGHYERPPYN 143 (358)
Q Consensus 77 pt~fI~GNHE~~~~l-~el------~~gg~va~NI~yLg~~gv~~i~Gl--rIaG---lsGi~~~-~~y~~~~~e~~Py~ 143 (358)
|.|.|.||||-..-. .++ ....|+|+..||... .++++.++ ++.. .+-..+. .+++ + ..|=
T Consensus 115 pWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rsf~~~a-e~ve~f~v~~~~f~~d~~~~~~~~~ydw~-~---v~PR- 188 (336)
T KOG2679|consen 115 PWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRSFYVDA-EIVEMFFVDTTPFMDDTFTLCTDDVYDWR-G---VLPR- 188 (336)
T ss_pred chhhhccCccccCchhhhhhHHHHhhccceecccHHhhcc-eeeeeeccccccchhhheecccccccccc-c---CChH-
Confidence 899999999876222 222 135699999998854 45555333 3322 2211110 1111 1 1110
Q ss_pred hhhHhhhhhhhhHHHH-HHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEE
Q 018289 144 ESTIRSVYHVREYDVH-KLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYW 222 (358)
Q Consensus 144 ~~~~~s~yh~re~dv~-kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPryw 222 (358)
-.-++.. ..+++ .|.+.+.+--|++-|-+=..+..+|++..| .+.+.-|+++-+-...
T Consensus 189 ~~~~~~~----l~~le~~L~~S~a~wkiVvGHh~i~S~~~HG~T~eL-----------------~~~LlPiL~~n~VdlY 247 (336)
T KOG2679|consen 189 VKYLRAL----LSWLEVALKASRAKWKIVVGHHPIKSAGHHGPTKEL-----------------EKQLLPILEANGVDLY 247 (336)
T ss_pred HHHHHHH----HHHHHHHHHHhhcceEEEecccceehhhccCChHHH-----------------HHHHHHHHHhcCCcEE
Confidence 0001111 11222 244445677899999999999999987655 2347788899999999
Q ss_pred EEcCCCCccceeeccCCCCCeeEEEEccccCCCCCeeE-EEeccCCCCCceeeeChH
Q 018289 223 FSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQ-VFEIESGQGPYEIQYDEE 278 (358)
Q Consensus 223 fsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~-a~~i~~~~~~~~~~~d~~ 278 (358)
++||-|+----. .....+.|+-=+.- .+-|-- -.+=..+++.++++||-+
T Consensus 248 ~nGHDHcLQhis----~~e~~iqf~tSGag--Skaw~g~~~~~~~~p~~lkF~Ydgq 298 (336)
T KOG2679|consen 248 INGHDHCLQHIS----SPESGIQFVTSGAG--SKAWRGTDHNPEVNPKELKFYYDGQ 298 (336)
T ss_pred Eecchhhhhhcc----CCCCCeeEEeeCCc--ccccCCCccCCccChhheEEeeCCC
Confidence 999988642110 11235677744331 111111 001012356778888877
No 79
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=97.53 E-value=0.0046 Score=59.20 Aligned_cols=220 Identities=10% Similarity=0.121 Sum_probs=111.5
Q ss_pred EEEEEcCCC-CCh----HHHHHHHHHHHHhcC--------CCccEEEEecCccccCCc-chhhhcc-------chhhhHh
Q 018289 2 RIAVEGCMH-GEL----DNVYKTLQYMENINS--------YKIDLLLCCGDFQAVRNE-NDMESLN-------VPRKYRE 60 (358)
Q Consensus 2 kIlv~GD~H-G~l----d~i~~~v~~~~~k~g--------~~~DllI~~GDf~~~~n~-~dl~~~~-------~p~k~~~ 60 (358)
+|++++++| |+- .++-..++-+.-..| .++.-||+|||....-.. .+..... -...+..
T Consensus 1 ~i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (257)
T cd07387 1 YIALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEA 80 (257)
T ss_pred CEEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHH
Confidence 488999999 422 222222222321111 145679999998764321 1100000 0011233
Q ss_pred hhHHHHHhcCCCCCCccEEEEcCCCCCchhHHH-------HhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCC
Q 018289 61 MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWE-------LYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYR 133 (358)
Q Consensus 61 l~~F~~y~~g~~~~pvpt~fI~GNHE~~~~l~e-------l~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~ 133 (358)
+..|-.|++... ..+|+..++||||..+.... +.....--.|+..+.+=..++++|+||.|.||-- -.|..
T Consensus 81 ~~~ld~~l~~l~-~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqn-i~Di~ 158 (257)
T cd07387 81 VKELDNFLSQLA-SSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQN-VDDIL 158 (257)
T ss_pred HHHHHHHHHhhh-cCCeEEECCCCCCcccccCCCCCCCHHHhhcccccCCcEEeCCCeEEEECCEEEEEECCCC-HHHHH
Confidence 445555554443 36899999999999865421 1111112246666666667889999999999953 12211
Q ss_pred CCCCCCCCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHH
Q 018289 134 LGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQL 213 (358)
Q Consensus 134 ~~~~e~~Py~~~~~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~l 213 (358)
+ ..+++.. + .-++++++- =|-.|..-......+ ....+||.
T Consensus 159 k----y~~~~~~-l--------~~me~~L~w--------rHlaPTaPDTL~~yP-~~~~Dpfv----------------- 199 (257)
T cd07387 159 K----YSSLESR-L--------DILERTLKW--------RHIAPTAPDTLWCYP-FTDRDPFI----------------- 199 (257)
T ss_pred H----hCCCCCH-H--------HHHHHHHHh--------cccCCCCCCcccccc-CCCCCcee-----------------
Confidence 1 1122110 0 002222211 144443221110000 00012322
Q ss_pred HHHhCCCEEEEcCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018289 214 LEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (358)
Q Consensus 214 l~~lkPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~ 265 (358)
-.--|...|+||.|..-...+.. +.++.+|-|++.++ .+-.-+-.+|+.
T Consensus 200 -i~~~PhVyf~Gnq~~f~t~~~~~-~~~~~v~lv~vP~F-s~t~~~vlvdl~ 248 (257)
T cd07387 200 -LEECPHVYFAGNQPKFGTKLVEG-EEGQRVLLVCVPSF-SKTGTAVLVNLR 248 (257)
T ss_pred -ecCCCCEEEeCCCcceeeeEEEc-CCCCeEEEEEeCCc-CcCCEEEEEECC
Confidence 12359999999998765555543 34567999999888 344555566654
No 80
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.53 E-value=0.00043 Score=61.48 Aligned_cols=98 Identities=16% Similarity=0.009 Sum_probs=55.7
Q ss_pred EEEcCCCCChHHHHH---------------HHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHh
Q 018289 4 AVEGCMHGELDNVYK---------------TLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (358)
Q Consensus 4 lv~GD~HG~ld~i~~---------------~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~ 68 (358)
.+++|+|-......+ .++.+++... +.|.||+|||+........ + .+++
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~d~vi~~GDl~~~~~~~~---------~------~~~l 65 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVG-PDDTVYHLGDFSFGGKAGT---------E------LELL 65 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcC-CCCEEEEeCCCCCCCChHH---------H------HHHH
Confidence 578999965554322 2444444433 6899999999986543211 0 1222
Q ss_pred cCCCCCCccEEEEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEe
Q 018289 69 SGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLS 124 (358)
Q Consensus 69 ~g~~~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGls 124 (358)
.+.+.++++|.||||........ . .... ..++.....++++|.+|.-..
T Consensus 66 ---~~~~~~~~~v~GNHD~~~~~~~~-~-~~~~--~~~~~~~~~~~~~~~~i~l~H 114 (168)
T cd07390 66 ---SRLNGRKHLIKGNHDSSLERKLL-A-FLLK--FESVLQAVRLKIGGRRVYLSH 114 (168)
T ss_pred ---HhCCCCeEEEeCCCCchhhhccc-c-cccc--cceeeeEEEEEECCEEEEEEe
Confidence 22456899999999975322111 0 0001 112334455677889988765
No 81
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=97.52 E-value=0.0013 Score=67.12 Aligned_cols=183 Identities=20% Similarity=0.173 Sum_probs=98.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEE
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI 81 (358)
+++|.||.--.-.. ........++. ++|++|++|||........ . .-.+|.+...- ..+-+|..++
T Consensus 149 ~~~i~GDlG~~~~~--~s~~~~~~~~~-k~d~vlhiGDlsYa~~~~n-------~---~wD~f~r~vEp-~As~vPymv~ 214 (452)
T KOG1378|consen 149 RAAIFGDMGCTEPY--TSTLRNQEENL-KPDAVLHIGDLSYAMGYSN-------W---QWDEFGRQVEP-IASYVPYMVC 214 (452)
T ss_pred eEEEEccccccccc--cchHhHHhccc-CCcEEEEecchhhcCCCCc-------c---chHHHHhhhhh-hhccCceEEe
Confidence 68888887432211 11122223333 7999999999975432211 1 12233333321 2356899999
Q ss_pred cCCCCCchh----HHHH------h-hCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhh
Q 018289 82 GGNHEASNY----LWEL------Y-YGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSV 150 (358)
Q Consensus 82 ~GNHE~~~~----l~el------~-~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~ 150 (358)
.||||-... +... + .+++-..|++|= +.+++++|.++|.-. +| + -.++. .-
T Consensus 215 ~GNHE~d~~~~~~F~~y~~Rf~mP~~~s~s~~~l~YS-----fd~G~vhfv~lsse~---~~--~---~~~~~-----~Q 276 (452)
T KOG1378|consen 215 SGNHEIDWPPQPCFVPYSARFNMPGNSSESDSNLYYS-----FDVGGVHFVVLSTET---YY--N---FLKGT-----AQ 276 (452)
T ss_pred cccccccCCCcccccccceeeccCCCcCCCCCceeEE-----EeeccEEEEEEeccc---cc--c---ccccc-----hH
Confidence 999986522 1000 0 122333356663 578999999998543 22 1 01111 11
Q ss_pred hhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCc--HHHHHHHHHhCCCEEEEcCCC
Q 018289 151 YHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGS--EPAAQLLEKLKPSYWFSAHLH 228 (358)
Q Consensus 151 yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS--~~l~~ll~~lkPrywfsGH~H 228 (358)
|.-=+.|+.+..+.+.+=-|++-|-+=..-.... . ...+...+ ..+++|+-+.+=..-|+||.|
T Consensus 277 Y~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~----~----------~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH 342 (452)
T KOG1378|consen 277 YQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDA----H----------YREGEFESMREGLEPLFVKYKVDVVFWGHVH 342 (452)
T ss_pred HHHHHHHHHHhcccCCCeEEEEecccceecCCch----h----------hccCcchhhHHHHHHHHHHhceeEEEeccce
Confidence 2222344444433335667888886654332210 0 11122223 369999999999999999998
Q ss_pred Cc
Q 018289 229 CK 230 (358)
Q Consensus 229 ~~ 230 (358)
.+
T Consensus 343 ~Y 344 (452)
T KOG1378|consen 343 RY 344 (452)
T ss_pred eh
Confidence 43
No 82
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.52 E-value=0.0021 Score=67.71 Aligned_cols=110 Identities=17% Similarity=0.054 Sum_probs=62.5
Q ss_pred CEEEEEcCCCCChHH---------------------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhH
Q 018289 1 MRIAVEGCMHGELDN---------------------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYR 59 (358)
Q Consensus 1 MkIlv~GD~HG~ld~---------------------i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~ 59 (358)
+.|+-+.|+||.+.. +...++++.+++ +--+++-+||++.......+. +-+
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~--~n~l~ldaGD~~~gs~~~~~~------~g~ 72 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAES--KNALVLHAGDAIIGTLYFTLF------GGR 72 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhC--CCeEEEECCCCCCCccchhhc------CCH
Confidence 478999999997643 222233333322 456899999987543222110 001
Q ss_pred hhhHHHHHhcCCCCCCccEEEEcCCCCCc---hhHHHHh---hCCccCCcEEEe---------CCceEEEEcCEEEEEEe
Q 018289 60 EMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELY---YGGWAAPNIYFL---------GFAGVVKFGNIRIGGLS 124 (358)
Q Consensus 60 ~l~~F~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~---~gg~va~NI~yL---------g~~gv~~i~GlrIaGls 124 (358)
.+-+++.. .. .-.++.||||.. ..|.++. .-.|++.||++- ...-+++++|+|||-+|
T Consensus 73 ~~i~~~N~------~g-~Da~~lGNHEFd~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiG 145 (550)
T TIGR01530 73 ADAALMNA------AG-FDFFTLGNHEFDAGNEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIG 145 (550)
T ss_pred HHHHHHhc------cC-CCEEEeccccccCCHHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEE
Confidence 12222221 22 237889999975 3344433 234889998743 23455678999998665
Q ss_pred C
Q 018289 125 G 125 (358)
Q Consensus 125 G 125 (358)
=
T Consensus 146 l 146 (550)
T TIGR01530 146 L 146 (550)
T ss_pred e
Confidence 3
No 83
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.50 E-value=0.0038 Score=65.78 Aligned_cols=112 Identities=17% Similarity=0.113 Sum_probs=62.7
Q ss_pred CEEEEEcCCCCChH----------HHHHHHHHHHHh---cCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHH
Q 018289 1 MRIAVEGCMHGELD----------NVYKTLQYMENI---NSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (358)
Q Consensus 1 MkIlv~GD~HG~ld----------~i~~~v~~~~~k---~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y 67 (358)
+.|+-+.|+||.+. .+-..|+++.++ .+ +--+++-+||++......++. +-+.+-+++.
T Consensus 35 ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~-~~~l~ldaGD~~~Gs~~s~~~------~g~~~i~~mN- 106 (551)
T PRK09558 35 ITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEG-GSVLLLSGGDINTGVPESDLQ------DAEPDFRGMN- 106 (551)
T ss_pred EEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccC-CCEEEEcCCccccceEhhhhc------CCchhHHHHh-
Confidence 36899999999864 122223333221 13 456899999987543222211 0011222222
Q ss_pred hcCCCCCCccEEEEcCCCCCc---hhHHHHhhC---CccCCcEEEeC-------CceEEEEcCEEEEEEeCc
Q 018289 68 YSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLG-------FAGVVKFGNIRIGGLSGI 126 (358)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg-------~~gv~~i~GlrIaGlsGi 126 (358)
.+.+- .++.||||.. ..|.++... .|++.||++-. ..-+++++|+|||.+|=.
T Consensus 107 -----~~g~D-a~tlGNHEFD~G~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~ 172 (551)
T PRK09558 107 -----LIGYD-AMAVGNHEFDNPLSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLT 172 (551)
T ss_pred -----cCCCC-EEcccccccCcCHHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEe
Confidence 23443 4556999975 334444322 48899998642 233457799999977644
No 84
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.47 E-value=0.004 Score=65.01 Aligned_cols=112 Identities=21% Similarity=0.210 Sum_probs=67.2
Q ss_pred CEEEEEcCCCCChH---------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHH
Q 018289 1 MRIAVEGCMHGELD---------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (358)
Q Consensus 1 MkIlv~GD~HG~ld---------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~ 65 (358)
++|+-+.|+||.+. .+...++++.++. +-.++|-+||+.......+.. .+-..+-+.+
T Consensus 27 l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~--~~~llld~GD~~~G~~l~~~~-----~~g~~~~~~m 99 (517)
T COG0737 27 LTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAEN--KNVLLLDAGDLIQGSPLSDYL-----TKGEPTVDLL 99 (517)
T ss_pred EEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhc--CCeEEEeCCcccCCccccccc-----cCCChHHHHH
Confidence 47899999999988 5666666555443 467899999987543222210 0011111222
Q ss_pred HHhcCCCCCCccEEEEcCCCCCc---hhHHHHhhC---CccCCcEEEe-C-------CceEEEEcCEEEEEEeCc
Q 018289 66 KYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFL-G-------FAGVVKFGNIRIGGLSGI 126 (358)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yL-g-------~~gv~~i~GlrIaGlsGi 126 (358)
..+++- +...||||.. ..+.+...+ .|++.||+.= + ..-+++++|+|||-+|=.
T Consensus 100 ------N~m~yD-a~tiGNHEFd~g~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~ 167 (517)
T COG0737 100 ------NALGYD-AMTLGNHEFDYGLEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLT 167 (517)
T ss_pred ------hhcCCc-EEeecccccccCHHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEec
Confidence 223433 5566799986 334444432 4889999866 1 233567799999877633
No 85
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=97.43 E-value=0.0034 Score=64.39 Aligned_cols=215 Identities=16% Similarity=0.253 Sum_probs=117.8
Q ss_pred EEEEEcCCCC-Ch---HHHHH-HHHHHHHhcCCC------ccEEEEecCccc-----cCCcchhhhccchhhhHhhhHHH
Q 018289 2 RIAVEGCMHG-EL---DNVYK-TLQYMENINSYK------IDLLLCCGDFQA-----VRNENDMESLNVPRKYREMKSFW 65 (358)
Q Consensus 2 kIlv~GD~HG-~l---d~i~~-~v~~~~~k~g~~------~DllI~~GDf~~-----~~n~~dl~~~~~p~k~~~l~~F~ 65 (358)
++++++|+|= .. ...|. .++-+ +| + +.++||+||... +.+..+|.-...+.-|.++..|+
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl---~g-~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWL---NG-PGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHh---cC-CcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 6899999995 22 22222 22222 23 3 489999999764 34555665555555565555444
Q ss_pred HHhcCCCCCCccEEEEcCCCCCchhHH------HHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCC
Q 018289 66 KYYSGQEVAPIPTIFIGGNHEASNYLW------ELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYER 139 (358)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~~~l~------el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~ 139 (358)
.- . .-.+.++.+|||||+..... ++...-....|+.++++-..+.++|..+-..+|..- .|...- -
T Consensus 303 ~~---v-p~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG~si-dDii~~---v 374 (481)
T COG1311 303 DQ---V-PEHIKVFIMPGNHDAVRQALPQPHFPELIKSLFSLNNLLFVSNPALVSLHGVDVLIYHGRSI-DDIIKL---V 374 (481)
T ss_pred hh---C-CCCceEEEecCCCCccccccCCCCcchhhcccccccceEecCCCcEEEECCEEEEEecCCCH-HHHHhh---C
Confidence 32 2 23456789999999874321 111111224568888888888999999988777531 111000 0
Q ss_pred CCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCC
Q 018289 140 PPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKP 219 (358)
Q Consensus 140 ~Py~~~~~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkP 219 (358)
+.-+.+. ....++.|++.+ |-.|. +|+.-++. |+ .-+.++-.-.|
T Consensus 375 P~~~~~~-------~~~ame~lLk~r--------HlaPt----ygg~~p~a---P~-------------~kD~lVIeevP 419 (481)
T COG1311 375 PGADYDS-------PLKAMEELLKRR--------HLAPT----YGGTLPIA---PE-------------TKDYLVIEEVP 419 (481)
T ss_pred CCCCccc-------hHHHHHHHHHhc--------ccCCC----CCCccccc---cC-------------CcCceeeccCC
Confidence 0101000 011122332221 33332 22221111 11 12345555689
Q ss_pred CEEEEcCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccCCCC
Q 018289 220 SYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQG 269 (358)
Q Consensus 220 rywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~~~~~ 269 (358)
.+..+||.|...-..+. .-+-++++..-...+|=-.++|.+..+
T Consensus 420 Dv~~~Ghvh~~g~~~y~------gv~~vns~T~q~qTefqk~vni~p~~~ 463 (481)
T COG1311 420 DVFHTGHVHKFGTGVYE------GVNLVNSGTWQEQTEFQKMVNINPTPG 463 (481)
T ss_pred cEEEEccccccceeEEe------ccceEEeeeecchhccceEEEecCccc
Confidence 99999999988766553 246677777766677777777765543
No 86
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=97.42 E-value=0.012 Score=59.59 Aligned_cols=190 Identities=19% Similarity=0.170 Sum_probs=101.6
Q ss_pred CEEEEEcCCCCCh-H--HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCC-CCCc
Q 018289 1 MRIAVEGCMHGEL-D--NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQE-VAPI 76 (358)
Q Consensus 1 MkIlv~GD~HG~l-d--~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~-~~pv 76 (358)
++++++||.-+.- + .+-+.+.++.++. ++|+||.+||-+ ...... +..| +=...|.+-|+... ...+
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~--~~~FVls~GDNF-~~Gv~s---v~Dp---~f~~~FE~vY~~~s~~L~~ 97 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNE--RVTFLVSPGSNF-PGGVDG---LNDP---KWKHCFENVYSEESGDMQI 97 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhC--CCCEEEECCccc-cCCCCC---ccch---hHHhhHhhhccCcchhhCC
Confidence 4789999965432 1 2334455555543 699999999976 322211 1112 11244777776543 2678
Q ss_pred cEEEEcCCCCCc-hhHHHH-----------------------hhCCccCCcEEEeCCceEE--------EE--cC--EEE
Q 018289 77 PTIFIGGNHEAS-NYLWEL-----------------------YYGGWAAPNIYFLGFAGVV--------KF--GN--IRI 120 (358)
Q Consensus 77 pt~fI~GNHE~~-~~l~el-----------------------~~gg~va~NI~yLg~~gv~--------~i--~G--lrI 120 (358)
|.+.|.||||-. +...++ .+..|..||-||--..... .. .+ +.|
T Consensus 98 Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~~~~v~f 177 (394)
T PTZ00422 98 PFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKDMSVAF 177 (394)
T ss_pred CeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCchhheeeeeeecccccccccccCCCCEEEE
Confidence 999999999863 111111 1246888987763211100 00 11 222
Q ss_pred EEEeCccCCccCCCCCCCCCCCC---hhhHhhhhhhhhHHHHHHhccC--CCccEEEeCCCCCCcccCCcchhhhhhccc
Q 018289 121 GGLSGIYNARHYRLGHYERPPYN---ESTIRSVYHVREYDVHKLMQIE--EPIDIFLSHDWPCGITDYGNCKELVRHKQY 195 (358)
Q Consensus 121 aGlsGi~~~~~y~~~~~e~~Py~---~~~~~s~yh~re~dv~kL~~~~--~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~ 195 (358)
..+=-.. +. ...||. ..+++-+ + ..|.... .+--|++-|-+-.....+++...|
T Consensus 178 ifiDT~~----l~----~~~~~~~~~~~~w~~L----~---~~L~~a~k~a~WkIVvGHhPIySsG~hg~~~~L------ 236 (394)
T PTZ00422 178 IFIDTWI----LS----SSFPYKKVSERAWQDL----K---ATLEYAPKIADYIIVVGDKPIYSSGSSKGDSYL------ 236 (394)
T ss_pred EEEECch----hc----ccCCccccCHHHHHHH----H---HHHHhhccCCCeEEEEecCceeecCCCCCCHHH------
Confidence 2221100 00 011221 1112111 1 1221112 345699999999887765543222
Q ss_pred hhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCcc
Q 018289 196 FEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKF 231 (358)
Q Consensus 196 f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f 231 (358)
...+..|+++.+-...++||.|+.-
T Consensus 237 -----------~~~L~PLL~ky~VdlYisGHDH~lq 261 (394)
T PTZ00422 237 -----------SYYLLPLLKDAQVDLYISGYDRNME 261 (394)
T ss_pred -----------HHHHHHHHHHcCcCEEEEccccceE
Confidence 1257889999999999999999763
No 87
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.29 E-value=0.00066 Score=60.46 Aligned_cols=72 Identities=18% Similarity=0.252 Sum_probs=41.0
Q ss_pred EEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHH
Q 018289 4 AVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKY 67 (358)
Q Consensus 4 lv~GD~HG~ld----------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y 67 (358)
|+++|+|=... .+++++.++-++. ++|.||++||++........ ..+.... +
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~--~~d~lii~GDl~~~~~~~~~------~~~~~~~-~--- 68 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEY--GPERLIILGDLKHSFGGLSR------QEFEEVA-F--- 68 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhc--CCCEEEEeCcccccccccCH------HHHHHHH-H---
Confidence 57888884332 2344444443333 68999999999854322110 0011111 1
Q ss_pred hcCCCCCCccEEEEcCCCCCc
Q 018289 68 YSGQEVAPIPTIFIGGNHEAS 88 (358)
Q Consensus 68 ~~g~~~~pvpt~fI~GNHE~~ 88 (358)
.......+++++|.||||..
T Consensus 69 -~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 69 -LRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred -HHhccCCCeEEEEcccCccc
Confidence 11334678999999999864
No 88
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=97.29 E-value=0.028 Score=58.20 Aligned_cols=56 Identities=13% Similarity=0.159 Sum_probs=33.3
Q ss_pred CCCccEEEeCCCCCCcccC-CcchhhhhhccchhhcccCCCCCcHHHHHHHHHh-CCCEEEEcCCCCcc
Q 018289 165 EEPIDIFLSHDWPCGITDY-GNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKL-KPSYWFSAHLHCKF 231 (358)
Q Consensus 165 ~~~vDIlLSHdwP~gI~~~-g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~l-kPrywfsGH~H~~f 231 (358)
..+.=|+++|-+|..+... .| ++.. .........+.++++.. +-+.|||||.|...
T Consensus 336 ~~k~VVVf~HHPp~s~g~~~~D--------p~~p---g~~~~n~~eLldLL~~ypnV~aVfsGHvH~n~ 393 (496)
T TIGR03767 336 SDTLFVLFSHHTSWSMVNELTD--------PVDP---GEKRHLGTELVSLLLEHPNVLAWVNGHTHSNK 393 (496)
T ss_pred CCCCEEEEECCCCccccccccc--------cccc---cccccCHHHHHHHHhcCCCceEEEECCcCCCc
Confidence 3455789999988653210 01 0000 00122345677777776 67889999999775
No 89
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.19 E-value=0.0011 Score=62.23 Aligned_cols=71 Identities=21% Similarity=0.293 Sum_probs=41.9
Q ss_pred EEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHH
Q 018289 2 RIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (358)
Q Consensus 2 kIlv~GD~HG~ld----------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~ 65 (358)
+.||++|+|=..+ ++.+++.++-++. ++|.||++||++...... ..++++.+|.
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~--~~d~vIi~GDl~h~~~~~--------~~~~~~~~~l 85 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKY--GIEALIINGDLKHEFKKG--------LEWRFIREFI 85 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhc--CCCEEEEcCccccccCCh--------HHHHHHHHHH
Confidence 5799999993221 2233333332332 599999999998543221 1133343333
Q ss_pred HHhcCCCCCCccEEEEcCCCCCc
Q 018289 66 KYYSGQEVAPIPTIFIGGNHEAS 88 (358)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~ 88 (358)
+- ...++++|.||||..
T Consensus 86 ~~------~~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 86 EV------TFRDLILIRGNHDAL 102 (225)
T ss_pred Hh------cCCcEEEECCCCCCc
Confidence 22 234899999999854
No 90
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=97.17 E-value=0.00075 Score=64.98 Aligned_cols=72 Identities=18% Similarity=0.299 Sum_probs=47.4
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
+++.|+||+||+++.+.+.++... -.+.|-++++||+..-. ...++.+ .+...+ ....|-.++.
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~---~~~~~~~vfLGD~VDrG-~~s~e~l----------~~l~~l--k~~~p~~v~l 91 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNG---PPPDTNYVFLGDYVDRG-PFSIEVI----------LLLFAL--KILYPNRVVL 91 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcC---CCCCceEEEeCCccCCC-CChHHHH----------HHHHHH--HhcCCCCEEE
Confidence 478999999999998876664332 12578999999998533 3223322 111111 2234667899
Q ss_pred EcCCCCCc
Q 018289 81 IGGNHEAS 88 (358)
Q Consensus 81 I~GNHE~~ 88 (358)
+.||||..
T Consensus 92 lrGNHE~~ 99 (271)
T smart00156 92 LRGNHESR 99 (271)
T ss_pred EeccccHH
Confidence 99999986
No 91
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.16 E-value=0.0021 Score=60.52 Aligned_cols=108 Identities=19% Similarity=0.170 Sum_probs=66.7
Q ss_pred EEEcCCCCC-----hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccE
Q 018289 4 AVEGCMHGE-----LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (358)
Q Consensus 4 lv~GD~HG~-----ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt 78 (358)
++++|.|=. +.+.+ +.-+... ....|.|.++||++..+-.+| --|++.+++..=.+- ......++
T Consensus 1 lFISDlHL~~~~p~~t~~f--l~Fl~~~-a~~ad~lyilGDifd~w~g~~----~~~~~~~~V~~~l~~---~a~~G~~v 70 (237)
T COG2908 1 LFISDLHLGPKRPALTAFF--LDFLREE-AAQADALYILGDIFDGWIGDD----EPPQLHRQVAQKLLR---LARKGTRV 70 (237)
T ss_pred CeeeccccCCCCcHHHHHH--HHHHHhc-cccCcEEEEechhhhhhhcCC----cccHHHHHHHHHHHH---HHhcCCeE
Confidence 368899854 22332 2223222 225799999999998775554 125556655332222 22356799
Q ss_pred EEEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeC
Q 018289 79 IFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSG 125 (358)
Q Consensus 79 ~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsG 125 (358)
|||.||||.. +.+.. + .-+-++..+.+..+++..|.|+.-+.|
T Consensus 71 ~~i~GN~Dfl--l~~~f-~-~~~g~~~l~~~~~~~~l~g~~~Ll~HG 113 (237)
T COG2908 71 YYIHGNHDFL--LGKRF-A-QEAGGMTLLPDPIVLDLYGKRILLAHG 113 (237)
T ss_pred EEecCchHHH--HHHHH-H-hhcCceEEcCcceeeeecCcEEEEEeC
Confidence 9999999832 32222 1 123346667788888999999988888
No 92
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=97.02 E-value=0.0011 Score=65.40 Aligned_cols=62 Identities=15% Similarity=0.090 Sum_probs=42.1
Q ss_pred CCCcHHHHHHHHHhCCCEEEEcCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018289 204 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (358)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~~ 266 (358)
.-|..++.+.+++.+=++.+=||--+.-+-...| +..-.|-|=|-.-|+.....-.++.|+.
T Consensus 250 ~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~-~~~~iTvFSa~nY~~~~~N~gavl~i~~ 311 (321)
T cd07420 250 YFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCH-NNKVITIFSASNYYEEGSNRGAYIKLGP 311 (321)
T ss_pred ccCHHHHHHHHHHCCCcEEEEcChhhhcceEEec-CCeEEEEecCCccCCCCCccEEEEEECC
Confidence 4588999999999999999999964332211223 3345788888777775444455566644
No 93
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=97.01 E-value=0.0012 Score=64.57 Aligned_cols=71 Identities=23% Similarity=0.360 Sum_probs=45.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEE
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI 81 (358)
+|.|+||+||+++.+.+.++.. ...+.|-++++||+..-. ..-++.+. -...+ ....|--++.+
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~---g~~~~~~ylFLGDyVDRG-~~s~Evi~---------lL~~l---ki~~p~~v~lL 107 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVG---GSPANTRYLFLGDYVDRG-YFSIECVL---------YLWAL---KILYPKTLFLL 107 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhc---CCCCCceEEEECCccCCC-CChHHHHH---------HHHHH---HhhcCCCEEEE
Confidence 5899999999999887665432 112468999999998533 22222221 11111 23356678999
Q ss_pred cCCCCCc
Q 018289 82 GGNHEAS 88 (358)
Q Consensus 82 ~GNHE~~ 88 (358)
.||||..
T Consensus 108 RGNHE~~ 114 (305)
T cd07416 108 RGNHECR 114 (305)
T ss_pred eCCCcHH
Confidence 9999975
No 94
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.91 E-value=0.03 Score=64.10 Aligned_cols=197 Identities=13% Similarity=0.084 Sum_probs=96.8
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhh---ccchhhhHhh
Q 018289 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMES---LNVPRKYREM 61 (358)
Q Consensus 1 MkIlv~GD~HG~ld----------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~---~~~p~k~~~l 61 (358)
++|+-++|+||.+. .+...|+++.++ + +--+++-+||++......+... .....|-..+
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~-~-~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~ 119 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKE-N-PNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPM 119 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHh-C-CCeEEEeCCCccCCChhhhHHhhhccccCCCcCHH
Confidence 47999999999753 334445444433 2 3345666999875432111100 0000000112
Q ss_pred hHHHHHhcCCCCCCccEEEEcCCCCCc---hhHHHHhh---CCccCCcEEEeC------CceEEEE---------cCEEE
Q 018289 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLG------FAGVVKF---------GNIRI 120 (358)
Q Consensus 62 ~~F~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg------~~gv~~i---------~GlrI 120 (358)
-+++.. +.+ -.++.||||.. ..|.+... -.++|.||+.-. ..-+.+. +|+||
T Consensus 120 i~~mN~------lgy-Da~~lGNHEFd~G~~~L~~~~~~a~fp~l~aNv~~~~~~~~~~py~I~~~~~~~~~g~~~gvkI 192 (1163)
T PRK09419 120 IKAMNA------LGY-DAGTLGNHEFNYGLDFLDGTIKGANFPVLNANVKYKNGKNVYTPYKIKEKTVTDENGKKQGVKV 192 (1163)
T ss_pred HHHHhh------cCc-cEEeecccccccCHHHHHHHHhcCCCCEEEeeeecCCCCcccCCEEEEEEEeeccCCCCCCeEE
Confidence 122211 222 25678999964 33444332 247899996432 2235566 89999
Q ss_pred EEEeCccCCc-cCCCCCCCC-CCCChhhHhhhhhhhhHHHHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhh
Q 018289 121 GGLSGIYNAR-HYRLGHYER-PPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEK 198 (358)
Q Consensus 121 aGlsGi~~~~-~y~~~~~e~-~Py~~~~~~s~yh~re~dv~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~ 198 (358)
|.+|=.-... .|...+.+. .-|.. .+.++ +..+.+|.+-..++=|+|||..-..-..
T Consensus 193 giiG~~~p~~~~~~~~~~~g~~~~~d-~v~~~----~~~v~~lk~~gaDvII~l~H~G~~~~~~---------------- 251 (1163)
T PRK09419 193 GYIGFVPPQIMTWDKKNLKGKVEVKN-IVEEA----NKTIPEMKKGGADVIVALAHSGIESEYQ---------------- 251 (1163)
T ss_pred EEEecCCcchhhcchhhccCcEEECC-HHHHH----HHHHHHHHhcCCCEEEEEeccCcCCCCC----------------
Confidence 9886543221 111111111 11211 11111 1223444332234447889975322110
Q ss_pred cccCCCCC-cHHHHHHHHHh-CCCEEEEcCCCCccc
Q 018289 199 EIQDGTLG-SEPAAQLLEKL-KPSYWFSAHLHCKFA 232 (358)
Q Consensus 199 ~i~~~~lG-S~~l~~ll~~l-kPrywfsGH~H~~f~ 232 (358)
..| ...+.+|++++ .-...+.||-|..+.
T Consensus 252 -----~~~~en~~~~la~~~~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 252 -----SSGAEDSVYDLAEKTKGIDAIVAGHQHGLFP 282 (1163)
T ss_pred -----CCCcchHHHHHHHhCCCCcEEEeCCCccccc
Confidence 011 22345677665 468999999999886
No 95
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=96.86 E-value=0.0018 Score=63.07 Aligned_cols=60 Identities=20% Similarity=0.225 Sum_probs=40.5
Q ss_pred CCCcHHHHHHHHHhCCCEEEEcCCCC--ccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018289 204 TLGSEPAAQLLEKLKPSYWFSAHLHC--KFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (358)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsGH~H~--~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~~ 266 (358)
.-|..++.+.+++.+=++.+=||--+ .|+-. + +..-.|-|=|-.-|+....-..++.|+.
T Consensus 219 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~--~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~~ 280 (293)
T cd07414 219 TFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFF--A-KRQLVTLFSAPNYCGEFDNAGAMMSVDE 280 (293)
T ss_pred ecCHHHHHHHHHHcCCeEEEECCccccCeEEEe--C-CCcEEEEecCCcccCCCCceEEEEEECC
Confidence 35899999999999999999999644 34422 2 3345788877777764333345555543
No 96
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=96.78 E-value=0.0025 Score=62.80 Aligned_cols=60 Identities=18% Similarity=0.174 Sum_probs=41.5
Q ss_pred CCCcHHHHHHHHHhCCCEEEEcCCCCc--cceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018289 204 TLGSEPAAQLLEKLKPSYWFSAHLHCK--FAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (358)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsGH~H~~--f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~~ 266 (358)
.-|..++.+.+++.+=.+.+=||--+. |+-. + +..-.|-|=|-.-|+....-..++.|..
T Consensus 228 ~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~--~-~~~~iTvFSa~~Y~~~~~N~ga~l~i~~ 289 (320)
T PTZ00480 228 VFSQEIVQVFLKKHELDLICRAHQVVEDGYEFF--S-KRQLVTLFSAPNYCGEFDNAGSMMTIDE 289 (320)
T ss_pred ccCHHHHHHHHHhCCCcEEEEcCccccCceEEe--C-CCcEEEEeCCcccCCCCCccEEEEEECC
Confidence 369999999999999999999996443 3322 2 3345788888777775333345555543
No 97
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.75 E-value=0.063 Score=58.99 Aligned_cols=117 Identities=18% Similarity=0.160 Sum_probs=61.5
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccc-----hhhh-
Q 018289 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNV-----PRKY- 58 (358)
Q Consensus 1 MkIlv~GD~HG~ld----------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~-----p~k~- 58 (358)
++|+-+.|+||.+. ++-..|+++.+++ +--+|+-+||+.......++..-.. |.+-
T Consensus 40 L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~--~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 40 LRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEA--KNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred EEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhC--CCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 47999999999863 2333344433332 3469999999874332222110000 0000
Q ss_pred --HhhhHHHHHhcCCCCCCccEEEEcCCCCCc---hhHHHHhhC---CccCCcEEEeC-------------CceEEEE--
Q 018289 59 --REMKSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLG-------------FAGVVKF-- 115 (358)
Q Consensus 59 --~~l~~F~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg-------------~~gv~~i-- 115 (358)
.-+-+++.. +.+ -....||||.. .+|.+...+ .+|+.||+.-. ..-|++.
T Consensus 118 ~~~p~i~~mN~------lgy-Da~tlGNHEFdyG~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~~~~~~~PY~I~e~~v 190 (780)
T PRK09418 118 YTHPLYRLMNL------MKY-DVISLGNHEFNYGLDYLNKVISKTEFPVINSNVYKDDKDNNEENDQNYFKPYHVFEKEV 190 (780)
T ss_pred cchHHHHHHhc------cCC-CEEeccccccccCHHHHHHHHhhCCCCEEEeeeecccccccccccccccCCEEEEEeee
Confidence 001112111 222 26788999954 344444432 48899998532 1223333
Q ss_pred -------cCEEEEEEeCc
Q 018289 116 -------GNIRIGGLSGI 126 (358)
Q Consensus 116 -------~GlrIaGlsGi 126 (358)
+|+|||.+|=.
T Consensus 191 ~~~~G~~~gvKIGiIGlt 208 (780)
T PRK09418 191 EDESGQKQKVKIGVMGFV 208 (780)
T ss_pred cccccccCCceEEEEEec
Confidence 58999988754
No 98
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=96.70 E-value=0.0027 Score=61.69 Aligned_cols=62 Identities=15% Similarity=0.151 Sum_probs=40.0
Q ss_pred CCCcHHHHHHHHHhCCCEEEEcCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018289 204 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (358)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~~ 266 (358)
.-|..++.+.+++.+=++.+=||--+.-+-...+ +..-.|-|=|-.-|+....-..++.|+.
T Consensus 211 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~-~~~~~TvfSa~~y~~~~~n~~a~l~i~~ 272 (285)
T cd07415 211 LFGQDVVEEFNHNNGLTLICRAHQLVMEGYQWMF-DDKLVTVWSAPNYCYRCGNVASIMELDE 272 (285)
T ss_pred ccCHHHHHHHHHHCCCeEEEEcCccccceEEEec-CCcEEEEecCCcccCCCCceEEEEEECC
Confidence 4589999999999999999999964332211222 2335788877777753222244455543
No 99
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=96.66 E-value=0.0031 Score=61.80 Aligned_cols=63 Identities=11% Similarity=0.093 Sum_probs=40.4
Q ss_pred CCCcHHHHHHHHHhCCCEEEEcCCCCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018289 204 TLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (358)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~~ 266 (358)
.-|..++.+.+++.+=++.+=||--+.-+-...+++..-.|-|=|-.-|+...--..++.|+.
T Consensus 212 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~ 274 (303)
T PTZ00239 212 LFGAKVTKEFCRLNDLTLICRAHQLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDE 274 (303)
T ss_pred ccCHHHHHHHHHHCCCcEEEEcChhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECC
Confidence 468999999999999999999996443221112212224688877777754333345555543
No 100
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=96.61 E-value=0.0039 Score=61.42 Aligned_cols=59 Identities=19% Similarity=0.261 Sum_probs=39.4
Q ss_pred CCCcHHHHHHHHHhCCCEEEEcCCCCc--cceeeccCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018289 204 TLGSEPAAQLLEKLKPSYWFSAHLHCK--FAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (358)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsGH~H~~--f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~ 265 (358)
.-|..++.+.+++.+=++.+-||--+. |+.. + +..-.|-|=|-.-|+...---.++.|+
T Consensus 230 ~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~--~-~~~~~TvfSa~~Y~~~~~N~ga~~~i~ 290 (316)
T cd07417 230 QFGPDVTKRFLEENNLEYIIRSHEVKDEGYEVE--H-DGKCITVFSAPNYCDQMGNKGAFIRIT 290 (316)
T ss_pred EeCHHHHHHHHHHcCCcEEEECCcccceeEEEe--c-CCeEEEEeCCccccCCCCcceEEEEEe
Confidence 358899999999999999999997443 4332 2 234578887777776322234444443
No 101
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.54 E-value=0.0088 Score=56.44 Aligned_cols=74 Identities=20% Similarity=0.293 Sum_probs=49.5
Q ss_pred EEEEEcCCCCChHH----------------HHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHH
Q 018289 2 RIAVEGCMHGELDN----------------VYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFW 65 (358)
Q Consensus 2 kIlv~GD~HG~ld~----------------i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~ 65 (358)
+.+|++|+|=+++. +.+.+.++-++. .++.||+.||+........ +....+...|.
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~--~p~~lIilGD~KH~~~~~~------~~e~~~~~~f~ 92 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERY--GPKRLIILGDLKHEFGKSL------RQEKEEVREFL 92 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhc--CCCEEEEcCccccccCccc------cccHHHHHHHH
Confidence 57999999965543 334444444443 5999999999976543211 22234677788
Q ss_pred HHhcCCCCCCccEEEEcCCCCCc
Q 018289 66 KYYSGQEVAPIPTIFIGGNHEAS 88 (358)
Q Consensus 66 ~y~~g~~~~pvpt~fI~GNHE~~ 88 (358)
+++++. -+++|.||||+.
T Consensus 93 ~~~~~~-----evi~i~GNHD~~ 110 (235)
T COG1407 93 ELLDER-----EVIIIRGNHDNG 110 (235)
T ss_pred HHhccC-----cEEEEeccCCCc
Confidence 887553 389999999874
No 102
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=96.53 E-value=0.0037 Score=60.98 Aligned_cols=59 Identities=19% Similarity=0.210 Sum_probs=40.3
Q ss_pred CCCcHHHHHHHHHhCCCEEEEcCCCCc--cceeeccCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018289 204 TLGSEPAAQLLEKLKPSYWFSAHLHCK--FAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (358)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsGH~H~~--f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~ 265 (358)
.-|..++.+.+++.+=++.+=||--+. |+- .+ +..-.|-|=|-.-|+....-..++.|+
T Consensus 221 ~fg~~~~~~Fl~~n~l~~iiR~Hq~~~~G~~~--~~-~~~~iTvfSa~~Y~~~~~N~~a~l~i~ 281 (294)
T PTZ00244 221 LFGEDIVNDFLDMVDMDLIVRAHQVMERGYGF--FA-SRQLVTVFSAPNYCGEFDNDAAVMNID 281 (294)
T ss_pred ccCHHHHHHHHHHcCCcEEEEcCccccCceEE--cC-CCeEEEEeCCccccCCCCceEEEEEEC
Confidence 458999999999999999999997443 332 22 334578887777776433334445554
No 103
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=96.49 E-value=0.1 Score=56.27 Aligned_cols=116 Identities=17% Similarity=0.124 Sum_probs=61.7
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhh---Hhh
Q 018289 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKY---REM 61 (358)
Q Consensus 1 MkIlv~GD~HG~ld----------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~---~~l 61 (358)
++|+-+.|+||.+. .+-..|+++.++. +--+++-+||++......+..... +.+. .-+
T Consensus 26 L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~--~n~llvD~GD~~qGsp~~~~~~~~-~~~~g~~~p~ 102 (649)
T PRK09420 26 LRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEA--KNSVLVDNGDLIQGSPLGDYMAAK-GLKAGDVHPV 102 (649)
T ss_pred EEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhC--CCEEEEECCCcCCCchhhhhhhhc-cccCCCcchH
Confidence 57999999999863 3333444443332 346899999987543322211000 0000 001
Q ss_pred hHHHHHhcCCCCCCccEEEEcCCCCCc---hhHHHHhhC---CccCCcEEEeCC-------ceEEEE-----c----CEE
Q 018289 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLGF-------AGVVKF-----G----NIR 119 (358)
Q Consensus 62 ~~F~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg~-------~gv~~i-----~----Glr 119 (358)
-+++.. +.+ -....||||.. .+|.+...+ .+++.||+.... .-|++. + |+|
T Consensus 103 i~amN~------lgy-Da~tlGNHEFd~G~~~L~~~~~~a~fP~l~ANv~~~~~~~~~~~py~I~e~~v~~~~G~~~~vk 175 (649)
T PRK09420 103 YKAMNT------LDY-DVGNLGNHEFNYGLDYLKKALAGAKFPYVNANVIDAKTGKPLFTPYLIKEKEVKDKDGKEHTIK 175 (649)
T ss_pred HHHHHh------cCC-cEEeccchhhhcCHHHHHHHHhcCCCCEEEEEEEecCCCCcccCCeEEEEEEeeccCCCccceE
Confidence 112211 222 26788999964 445444433 488999975321 223343 3 589
Q ss_pred EEEEeCc
Q 018289 120 IGGLSGI 126 (358)
Q Consensus 120 IaGlsGi 126 (358)
||.+|=.
T Consensus 176 IGiIGl~ 182 (649)
T PRK09420 176 IGYIGFV 182 (649)
T ss_pred EEEEEec
Confidence 9877643
No 104
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=96.45 E-value=0.018 Score=55.73 Aligned_cols=114 Identities=17% Similarity=0.161 Sum_probs=60.8
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHH
Q 018289 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSF 64 (358)
Q Consensus 1 MkIlv~GD~HG~ld----------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F 64 (358)
++|+-++|+||.++ .+.+.+++..++.+ +--+++-+||++......+.. ..|-+.+-++
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~-~~~Llld~GD~~qGs~~~~~~----~~~g~~~~~~ 80 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKG-VDLLLVDTGDLHDGNGLSDAS----PPPGSYSNPI 80 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcC-CCEEEEeCCCccCCeeceeee----cCCChHHHHH
Confidence 47999999999764 22233322222223 223777899977533222111 0011223333
Q ss_pred HHHhcCCCCCCccEEEEcCCCCCchh---HHH---Hh---hCCccCCcEEEeCC----------ceEEEEc-CEEEEEEe
Q 018289 65 WKYYSGQEVAPIPTIFIGGNHEASNY---LWE---LY---YGGWAAPNIYFLGF----------AGVVKFG-NIRIGGLS 124 (358)
Q Consensus 65 ~~y~~g~~~~pvpt~fI~GNHE~~~~---l~e---l~---~gg~va~NI~yLg~----------~gv~~i~-GlrIaGls 124 (358)
+.. +++ =.++.||||.... +.. +. .-.|++.||++-.. .-+++++ |+|||-+|
T Consensus 81 mN~------mgy-Da~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiG 153 (282)
T cd07407 81 FRM------MPY-DLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFG 153 (282)
T ss_pred HHh------cCC-cEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEE
Confidence 322 332 2688999998421 222 21 23589999986531 2344666 99998765
Q ss_pred Cc
Q 018289 125 GI 126 (358)
Q Consensus 125 Gi 126 (358)
=.
T Consensus 154 lt 155 (282)
T cd07407 154 FL 155 (282)
T ss_pred Ee
Confidence 44
No 105
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.41 E-value=0.063 Score=51.39 Aligned_cols=41 Identities=24% Similarity=0.315 Sum_probs=32.1
Q ss_pred EEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccC
Q 018289 2 RIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVR 44 (358)
Q Consensus 2 kIlv~GD~HG~--ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~ 44 (358)
|||++||+=|. ...+.+.|.++.++. +.|++|.-||-.+..
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~--~~D~vi~NgEn~~gg 43 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEY--KIDFVIANGENAAGG 43 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHC--CCCEEEECCccccCC
Confidence 79999999997 456677777775554 589999999986543
No 106
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=96.39 E-value=0.024 Score=51.68 Aligned_cols=122 Identities=16% Similarity=0.150 Sum_probs=61.7
Q ss_pred EEEEcCCCCC-hHHHHHHHHHHHHh-c-CCCccEEEEecCccccCCcchhhhccchhhhHh----hhHHHHHhcCCCCCC
Q 018289 3 IAVEGCMHGE-LDNVYKTLQYMENI-N-SYKIDLLLCCGDFQAVRNENDMESLNVPRKYRE----MKSFWKYYSGQEVAP 75 (358)
Q Consensus 3 Ilv~GD~HG~-ld~i~~~v~~~~~k-~-g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~----l~~F~~y~~g~~~~p 75 (358)
|+++++.|-. =+..++.++.+-+. . ..++++||++|+|.......... -.++..++. +..+.+.++... ..
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~-~~ 78 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISS-GSVPDSYSFEEDFLKELDSFLESIL-PS 78 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHH-T---HHCCHHHHHHHHCHHHHCCCH-CC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCcccccccc-ccccccccccHHHHHHHHHHHhhcc-cc
Confidence 6788888865 22335555444332 2 24799999999998754332110 001111222 333344443332 35
Q ss_pred ccEEEEcCCCCCchh-HH---HHhhC--CccCC--cEEEeCCceEEEEcCEEEEEEeCc
Q 018289 76 IPTIFIGGNHEASNY-LW---ELYYG--GWAAP--NIYFLGFAGVVKFGNIRIGGLSGI 126 (358)
Q Consensus 76 vpt~fI~GNHE~~~~-l~---el~~g--g~va~--NI~yLg~~gv~~i~GlrIaGlsGi 126 (358)
+.+++|+|++|.... .. .+... ..... ++.++.+=..+.++|++|++.+|-
T Consensus 79 ~~vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~~~~~~~sNP~~~~i~~~~i~~~s~d 137 (209)
T PF04042_consen 79 TQVVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKYSNIHFVSNPCRISINGQEIGVTSGD 137 (209)
T ss_dssp SEEEEE--TTCTT-S-SCSB----TTTTCHHCTTTTEEE--CSEEEEETTEEEEE-SSH
T ss_pred cEEEEeCCCccccccCCCCCCCCCHHHHhhhhhcCceEEeCCCeEEEEeCCcEEEECCc
Confidence 789999999998755 11 11000 11122 278887778889999999998864
No 107
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.38 E-value=0.01 Score=53.06 Aligned_cols=52 Identities=27% Similarity=0.425 Sum_probs=31.2
Q ss_pred CccEEEEecCccccCCcchhhhccchhhhH-hhhHHHHHhcCCC--CCCccEEEEcCCCCC
Q 018289 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYR-EMKSFWKYYSGQE--VAPIPTIFIGGNHEA 87 (358)
Q Consensus 30 ~~DllI~~GDf~~~~n~~dl~~~~~p~k~~-~l~~F~~y~~g~~--~~pvpt~fI~GNHE~ 87 (358)
++|+||++||++......+- ..+. ....|.+.+.... ...+++++|.||||-
T Consensus 45 ~pd~vi~lGDl~d~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~ 99 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIADS------EEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDI 99 (171)
T ss_pred CCCEEEEeccccCCcEeCCH------HHHHHHHHHHHHHhcccccccCCceEEEECCcccc
Confidence 79999999999864332110 1111 2344444433221 136899999999984
No 108
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=96.36 E-value=0.012 Score=51.75 Aligned_cols=50 Identities=18% Similarity=0.341 Sum_probs=29.5
Q ss_pred CccEEEEecCccccCCcchhhhccchhhhH-hhhHHHHHhcCCCCCCccEEEEcCCCCC
Q 018289 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYR-EMKSFWKYYSGQEVAPIPTIFIGGNHEA 87 (358)
Q Consensus 30 ~~DllI~~GDf~~~~n~~dl~~~~~p~k~~-~l~~F~~y~~g~~~~pvpt~fI~GNHE~ 87 (358)
++|+||++||++.......- ..+. ....|.+.+. ....+|+++|.||||.
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~i~~v~GNHD~ 88 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTD------EEWEDYVERFKKMFG--HPPDLPLHVVVGNHDI 88 (156)
T ss_pred CCCEEEECCCCCCCCccCCH------HHHHHHHHHHHHHhc--cCCCCeEEEEcCCCCc
Confidence 69999999999864322110 0011 1233433322 1135789999999984
No 109
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=96.36 E-value=0.0099 Score=58.39 Aligned_cols=59 Identities=17% Similarity=0.207 Sum_probs=40.6
Q ss_pred CCCcHHHHHHHHHhCCCEEEEcCC--CCccceeeccCCCCCeeEEEEccccCCCCCeeEEEecc
Q 018289 204 TLGSEPAAQLLEKLKPSYWFSAHL--HCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIE 265 (358)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsGH~--H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~ 265 (358)
.-|..++.+.+++.+=++.+=||- ...|... + +..-.|-|=|-.-|+...--..++.|.
T Consensus 239 ~fg~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~--~-~~~~iTvfSa~~y~~~~~n~~ai~~i~ 299 (311)
T cd07419 239 KFGPDRVHRFLEENDLQMIIRAHECVMDGFERF--A-QGKLITLFSATNYCGTAGNAGAILVLG 299 (311)
T ss_pred eECHHHHHHHHHHCCCeEEEEechhhhCCeEEe--C-CCeEEEEecCCcccCCCCceEEEEEEC
Confidence 358899999999999999999996 3445432 2 223578887777776543445555554
No 110
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=96.32 E-value=0.13 Score=55.22 Aligned_cols=116 Identities=16% Similarity=0.074 Sum_probs=60.9
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhh---Hhh
Q 018289 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKY---REM 61 (358)
Q Consensus 1 MkIlv~GD~HG~ld----------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~---~~l 61 (358)
++|+-+.|+||.+. .+-..|+++.+++ +--+++-+||++......+...-. +-+. .-+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~--~n~lllD~GD~~qGsp~~~~~~~~-~~~~~~~~p~ 79 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEV--KNSVLVDNGDLIQGSPLGDYMAAQ-GLKAGQMHPV 79 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhC--CCeEEEECCCcCCCccchhhhhhc-cccCCCcChH
Confidence 47999999999864 2333344443332 346899999987543222211000 0000 001
Q ss_pred hHHHHHhcCCCCCCccEEEEcCCCCCc---hhHHHHhh---CCccCCcEEEeC-------CceEEEE-----c----CEE
Q 018289 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYY---GGWAAPNIYFLG-------FAGVVKF-----G----NIR 119 (358)
Q Consensus 62 ~~F~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~---gg~va~NI~yLg-------~~gv~~i-----~----Glr 119 (358)
-+++. .+.+- ....||||.. .+|.+... -.+++.||+... ..-+.+. + |+|
T Consensus 80 ~~~mN------~lgyD-a~tlGNHEFd~G~~~L~~~~~~a~fP~l~aNv~~~~~~~~~~~py~I~~~~~~~~~G~~~~~k 152 (626)
T TIGR01390 80 YKAMN------LLKYD-VGNLGNHEFNYGLPFLKQAIAAAKFPIVNANVVDAGTGQPAFTPYLIQERSVVDTDGKPHTLK 152 (626)
T ss_pred HHHHh------hcCcc-EEecccccccccHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCeEEEEEEeeccCCCccceE
Confidence 11111 12322 5778999964 33444433 247889987532 1123333 3 699
Q ss_pred EEEEeCc
Q 018289 120 IGGLSGI 126 (358)
Q Consensus 120 IaGlsGi 126 (358)
||.+|-.
T Consensus 153 IGiIG~~ 159 (626)
T TIGR01390 153 VGYIGFV 159 (626)
T ss_pred EEEEEec
Confidence 9988654
No 111
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=96.31 E-value=0.0072 Score=60.86 Aligned_cols=70 Identities=23% Similarity=0.421 Sum_probs=44.8
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCC--ccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEE
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINSYK--IDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTI 79 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g~~--~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~ 79 (358)
+|.|+||+||.++.+...++. .|.+ -+.+|++||+.. |...-++.+ .+...+ ....|--++
T Consensus 67 ~i~VvGDIHG~~~dL~~ll~~----~g~~~~~~~ylFLGDyVD-RGp~SlEvl----------~lL~~l--ki~~p~~v~ 129 (377)
T cd07418 67 EVVVVGDVHGQLHDVLFLLED----AGFPDQNRFYVFNGDYVD-RGAWGLETF----------LLLLSW--KVLLPDRVY 129 (377)
T ss_pred CEEEEEecCCCHHHHHHHHHH----hCCCCCCceEEEeccccC-CCCChHHHH----------HHHHHH--hhccCCeEE
Confidence 479999999999988776543 2322 356999999985 333333322 111111 223466689
Q ss_pred EEcCCCCCc
Q 018289 80 FIGGNHEAS 88 (358)
Q Consensus 80 fI~GNHE~~ 88 (358)
.+.||||..
T Consensus 130 lLRGNHE~~ 138 (377)
T cd07418 130 LLRGNHESK 138 (377)
T ss_pred EEeeecccc
Confidence 999999975
No 112
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=96.25 E-value=0.013 Score=60.95 Aligned_cols=79 Identities=23% Similarity=0.303 Sum_probs=49.0
Q ss_pred CEEEEEcCCCCC------------hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHH----
Q 018289 1 MRIAVEGCMHGE------------LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSF---- 64 (358)
Q Consensus 1 MkIlv~GD~HG~------------ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F---- 64 (358)
|||||..|+|-. +..+-+ |-.+.+.+ .+|+|+..||+|.....+. .++ |+-++-|
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeE-Il~iA~e~--~VDmiLlGGDLFHeNkPSr-~~L-----~~~i~lLRryC 84 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEE-ILEIAQEN--DVDMILLGGDLFHENKPSR-KTL-----HRCLELLRRYC 84 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHH-HHHHHHhc--CCcEEEecCcccccCCccH-HHH-----HHHHHHHHHHc
Confidence 799999999932 222222 22232332 7999999999996533221 011 2222222
Q ss_pred -------------------------HHHhcCCCCCCccEEEEcCCCCCc
Q 018289 65 -------------------------WKYYSGQEVAPIPTIFIGGNHEAS 88 (358)
Q Consensus 65 -------------------------~~y~~g~~~~pvpt~fI~GNHE~~ 88 (358)
..|++....+.+|++-|-||||++
T Consensus 85 lgdkP~~le~lSD~s~~f~~~~f~~VNY~DpNlNIsIPVFsIHGNHDDp 133 (646)
T KOG2310|consen 85 LGDKPVQLEILSDQSVNFGNSVFGNVNYEDPNLNISIPVFSIHGNHDDP 133 (646)
T ss_pred cCCCceeeEEecccceeccccccceecccCCCcceeeeeEEeecCCCCC
Confidence 235556666789999999999987
No 113
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.20 E-value=0.015 Score=51.69 Aligned_cols=69 Identities=20% Similarity=0.214 Sum_probs=47.3
Q ss_pred EEEEEcCCCCC------------hHHHHH-HHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHh
Q 018289 2 RIAVEGCMHGE------------LDNVYK-TLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYY 68 (358)
Q Consensus 2 kIlv~GD~HG~------------ld~i~~-~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~ 68 (358)
+|.++||+|=. .+..-+ .+..+++--+ +-|.|-++|||...+|.. ++.++.++-+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~-p~D~lwhLGDl~~~~n~~-----------~~a~~IlerL 72 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVG-PDDVLWHLGDLSSGANRE-----------RAAGLILERL 72 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCC-ccceEEEecccccccchh-----------hHHHHHHHHc
Confidence 58899999932 222221 2456666655 889999999999888753 2345556666
Q ss_pred cCCCCCCccEEEEcCCCCCc
Q 018289 69 SGQEVAPIPTIFIGGNHEAS 88 (358)
Q Consensus 69 ~g~~~~pvpt~fI~GNHE~~ 88 (358)
.|. ..+|+||||..
T Consensus 73 nGr------khlv~GNhDk~ 86 (186)
T COG4186 73 NGR------KHLVPGNHDKC 86 (186)
T ss_pred CCc------EEEeeCCCCCC
Confidence 664 48999999865
No 114
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=95.99 E-value=0.048 Score=52.51 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=33.1
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCcccc
Q 018289 1 MRIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAV 43 (358)
Q Consensus 1 MkIlv~GD~HG~--ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~ 43 (358)
||||++||+=|+ ...+-+.+..+.+++ +.|++|.-||..+.
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~--~~D~vIaNgEn~~g 43 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKY--QADLVIANGENTTH 43 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhC--CCCEEEEcCcccCC
Confidence 999999999998 456666677776654 59999999998754
No 115
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.97 E-value=0.029 Score=49.47 Aligned_cols=111 Identities=20% Similarity=0.354 Sum_probs=64.2
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccE
Q 018289 1 MRIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPT 78 (358)
Q Consensus 1 MkIlv~GD~HG~--ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt 78 (358)
|-++++||.|=- -..+-.+.+++- --| ++.-++|.|.+.+. ++++|+.. ..--+
T Consensus 1 mLvL~lgD~HiP~Ra~~Lp~KFkklL-vPg-ki~hilctGNlcs~-------------------e~~dylk~---l~~dv 56 (183)
T KOG3325|consen 1 MLVLVLGDLHIPHRANDLPAKFKKLL-VPG-KIQHILCTGNLCSK-------------------ESYDYLKT---LSSDV 56 (183)
T ss_pred CEEEEeccccCCccccccCHHHHhcc-CCC-ceeEEEEeCCcchH-------------------HHHHHHHh---hCCCc
Confidence 678999999842 222222222222 123 78889999986542 34566433 22234
Q ss_pred EEEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCccCCCCCCCCCCCChhhHhhhhhhhhHHH
Q 018289 79 IFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDV 158 (358)
Q Consensus 79 ~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~~~s~yh~re~dv 158 (358)
=.|.|.-|.. .. ....++++++.+|||.++|.. -.|+++.+. +
T Consensus 57 hiVrGeFD~~---------------~~-yP~~kvvtvGqfkIG~chGhq-----------ViP~gd~~s--L-------- 99 (183)
T KOG3325|consen 57 HIVRGEFDEN---------------LK-YPENKVVTVGQFKIGLCHGHQ-----------VIPWGDPES--L-------- 99 (183)
T ss_pred EEEecccCcc---------------cc-CCccceEEeccEEEEeecCcE-----------eecCCCHHH--H--------
Confidence 4566655433 11 124688999999999999853 467754322 1
Q ss_pred HHHhccCCCccEEEe
Q 018289 159 HKLMQIEEPIDIFLS 173 (358)
Q Consensus 159 ~kL~~~~~~vDIlLS 173 (358)
.+++-.-++|||||
T Consensus 100 -~~LaRqldvDILl~ 113 (183)
T KOG3325|consen 100 -ALLARQLDVDILLT 113 (183)
T ss_pred -HHHHHhcCCcEEEe
Confidence 12222237999997
No 116
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=95.84 E-value=0.13 Score=56.81 Aligned_cols=117 Identities=17% Similarity=0.079 Sum_probs=62.1
Q ss_pred CEEEEEcCCCCChH----------------HHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhh---Hhh
Q 018289 1 MRIAVEGCMHGELD----------------NVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKY---REM 61 (358)
Q Consensus 1 MkIlv~GD~HG~ld----------------~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~---~~l 61 (358)
++|+-+.|+||.+. ++...|+++.+++ +--+++-+||+.......++....-|-+. .-+
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~--~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~ 193 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKEN--PNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPM 193 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhC--CCEEEEecCCCCCCCcccchhhhccccccCcchHH
Confidence 47999999999863 3333344443332 34689999997754322221100000000 001
Q ss_pred hHHHHHhcCCCCCCccEEEEcCCCCCc---hhHHHHhhC---CccCCcEEEeCC-------ceEEEE-----cC----EE
Q 018289 62 KSFWKYYSGQEVAPIPTIFIGGNHEAS---NYLWELYYG---GWAAPNIYFLGF-------AGVVKF-----GN----IR 119 (358)
Q Consensus 62 ~~F~~y~~g~~~~pvpt~fI~GNHE~~---~~l~el~~g---g~va~NI~yLg~-------~gv~~i-----~G----lr 119 (358)
-+++.. +.+- ....||||.. .+|.+...+ .+++.||+.... .-|++. +| +|
T Consensus 194 i~amN~------LGyD-A~tLGNHEFDyG~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~~~~vK 266 (814)
T PRK11907 194 YAALEA------LGFD-AGTLGNHEFNYGLDYLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGKKVTLN 266 (814)
T ss_pred HHHHhc------cCCC-EEEechhhcccCHHHHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCcccceE
Confidence 222221 2222 5788999965 444444332 488999986432 223333 56 89
Q ss_pred EEEEeCc
Q 018289 120 IGGLSGI 126 (358)
Q Consensus 120 IaGlsGi 126 (358)
||.+|=.
T Consensus 267 IGiIGlv 273 (814)
T PRK11907 267 IGITGIV 273 (814)
T ss_pred EEEEEeC
Confidence 9877643
No 117
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=95.73 E-value=0.026 Score=54.84 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=43.7
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEE
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI 81 (358)
||+.++|+|-..-. .+.++.+.+..+...|+++.+||+...+.. +.+..... .++. .+++.++++|
T Consensus 46 ~iv~lSDlH~~~~~-~~~~~~~~~i~~~~~DlivltGD~~~~~~~---------~~~~~~~~---~L~~-L~~~~gv~av 111 (284)
T COG1408 46 KIVQLSDLHSLPFR-EEKLALLIAIANELPDLIVLTGDYVDGDRP---------PGVAALAL---FLAK-LKAPLGVFAV 111 (284)
T ss_pred EEEEeehhhhchhh-HHHHHHHHHHHhcCCCEEEEEeeeecCCCC---------CCHHHHHH---HHHh-hhccCCEEEE
Confidence 78999999975432 222222222222234999999999874111 11222222 2222 3478899999
Q ss_pred cCCCCCch
Q 018289 82 GGNHEASN 89 (358)
Q Consensus 82 ~GNHE~~~ 89 (358)
.||||-..
T Consensus 112 ~GNHd~~~ 119 (284)
T COG1408 112 LGNHDYGV 119 (284)
T ss_pred eccccccc
Confidence 99997653
No 118
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=94.66 E-value=0.11 Score=47.70 Aligned_cols=52 Identities=25% Similarity=0.437 Sum_probs=32.7
Q ss_pred CccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCC-C--------------CCCccEEEEcCCCCC
Q 018289 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQ-E--------------VAPIPTIFIGGNHEA 87 (358)
Q Consensus 30 ~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~-~--------------~~pvpt~fI~GNHE~ 87 (358)
++|.|+++||++..+...|.+ . +.+...|.+-+... . .-.++++.|+||||-
T Consensus 44 ~Pd~V~fLGDLfd~~w~~D~e-f-----~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDI 110 (193)
T cd08164 44 KPDAVVVLGDLFSSQWIDDEE-F-----AKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDV 110 (193)
T ss_pred CCCEEEEeccccCCCcccHHH-H-----HHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccC
Confidence 799999999998654333311 1 23456666643211 1 124889999999984
No 119
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=94.10 E-value=0.1 Score=48.84 Aligned_cols=69 Identities=20% Similarity=0.340 Sum_probs=45.7
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCC-CccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEE
Q 018289 3 IAVEGCMHGELDNVYKTLQYMENINSY-KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (358)
Q Consensus 3 Ilv~GD~HG~ld~i~~~v~~~~~k~g~-~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI 81 (358)
+-|+||+||.+-.+.+..+ .-|. |-.--|..|||..-. |-.++.|.-.+.-..+-|-.+-.+
T Consensus 48 VTvCGDIHGQFyDL~eLFr----tgG~vP~tnYiFmGDfVDRG-------------yySLEtfT~l~~LkaryP~~ITLl 110 (306)
T KOG0373|consen 48 VTVCGDIHGQFYDLLELFR----TGGQVPDTNYIFMGDFVDRG-------------YYSLETFTLLLLLKARYPAKITLL 110 (306)
T ss_pred eeEeeccchhHHHHHHHHH----hcCCCCCcceEEeccccccc-------------cccHHHHHHHHHHhhcCCceeEEe
Confidence 5699999999866655432 2232 445578999997532 233566655554455567667889
Q ss_pred cCCCCCc
Q 018289 82 GGNHEAS 88 (358)
Q Consensus 82 ~GNHE~~ 88 (358)
.||||..
T Consensus 111 RGNHEsR 117 (306)
T KOG0373|consen 111 RGNHESR 117 (306)
T ss_pred eccchhh
Confidence 9999976
No 120
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=94.06 E-value=0.21 Score=50.79 Aligned_cols=52 Identities=25% Similarity=0.392 Sum_probs=32.8
Q ss_pred CccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEEcCCCCCc
Q 018289 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEAS 88 (358)
Q Consensus 30 ~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI~GNHE~~ 88 (358)
++|+++++||++......+-++. +++...|.+-+ ..+-.++++.|+||||--
T Consensus 93 kPdvvffLGDLfDeG~~~~~eEf-----~~~~~RfkkIf--~~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 93 KPDVVFFLGDLFDEGQWAGDEEF-----KKRYERFKKIF--GRKGNIKVIYIAGNHDIG 144 (410)
T ss_pred CCCEEEEeccccccCccCChHHH-----HHHHHHHHHhh--CCCCCCeeEEeCCccccc
Confidence 79999999999985433322211 12233344433 223578999999999864
No 121
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=93.13 E-value=0.19 Score=47.80 Aligned_cols=70 Identities=21% Similarity=0.309 Sum_probs=44.7
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCC-CccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEE
Q 018289 3 IAVEGCMHGELDNVYKTLQYMENINSY-KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (358)
Q Consensus 3 Ilv~GD~HG~ld~i~~~v~~~~~k~g~-~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI 81 (358)
|-|+||+||.+..+.+..+ .-|. +-.--|.+|||..-. - -.+..|.-.+.-+.+-|--+-.|
T Consensus 45 vtvcGDIHGQf~Dllelf~----igG~~~~t~YLFLGDyVDRG-~------------~SvEt~lLLl~lK~rYP~ritLi 107 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFR----IGGDVPETNYLFLGDYVDRG-Y------------YSVETFLLLLALKVRYPDRITLI 107 (303)
T ss_pred cEEeecccchHHHHHHHHH----hCCCCCCCceEeecchhccc-c------------chHHHHHHHHHHhhcCcceeEEe
Confidence 5699999999887765442 2232 345578999997432 1 12344544433244456667889
Q ss_pred cCCCCCch
Q 018289 82 GGNHEASN 89 (358)
Q Consensus 82 ~GNHE~~~ 89 (358)
.||||...
T Consensus 108 RGNHEsRq 115 (303)
T KOG0372|consen 108 RGNHESRQ 115 (303)
T ss_pred eccchhhh
Confidence 99999873
No 122
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=92.48 E-value=0.25 Score=51.09 Aligned_cols=62 Identities=23% Similarity=0.357 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCC--------------------
Q 018289 13 LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQE-------------------- 72 (358)
Q Consensus 13 ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~-------------------- 72 (358)
++++.++|+.+++ +.+||++|.+||-+.... |-||.=|.+.++|..
T Consensus 84 ~~AaVqtvNal~~--~~p~df~is~GD~~nn~~------------~nElrWyidvldG~~I~p~SG~~~~~e~v~~~~p~ 149 (492)
T TIGR03768 84 LDAAVQTVNDLHK--RDRFDFGISLGDACNSTQ------------YNELRWYIDVLDGKPITPSSGAHAGADTIDYQKPF 149 (492)
T ss_pred HHHHHHHHHHhhc--CCCceEEEeccccccchh------------HHHHHHHHHHhcCCeeccCCCCCCCccCCCCCCcc
Confidence 5667777777744 358999999999864321 334444555555421
Q ss_pred -----CCCccEEEEcCCCCCc
Q 018289 73 -----VAPIPTIFIGGNHEAS 88 (358)
Q Consensus 73 -----~~pvpt~fI~GNHE~~ 88 (358)
...+|.|.+.||||..
T Consensus 150 ~a~GL~~~iPWY~v~GNHD~~ 170 (492)
T TIGR03768 150 QAAGLDKSIPWYQVLGNHDHF 170 (492)
T ss_pred cccccCCCCceEEeecCCccc
Confidence 1238999999999875
No 123
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=91.25 E-value=0.5 Score=45.36 Aligned_cols=69 Identities=20% Similarity=0.325 Sum_probs=42.2
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCc-cEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcC-CCCCCccEEE
Q 018289 3 IAVEGCMHGELDNVYKTLQYMENINSYKI-DLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSG-QEVAPIPTIF 80 (358)
Q Consensus 3 Ilv~GD~HG~ld~i~~~v~~~~~k~g~~~-DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g-~~~~pvpt~f 80 (358)
+-|+||+||.++.+.+.+ +.-|... --.|..||+..-...++ +.+ .|+-. +.+-|--+-+
T Consensus 62 vtvcGDvHGqf~dl~ELf----kiGG~~pdtnylfmGDyvdrGy~Sv-etV-------------S~lva~Kvry~~rvti 123 (319)
T KOG0371|consen 62 VTVCGDVHGQFHDLIELF----KIGGLAPDTNYLFMGDYVDRGYYSV-ETV-------------SLLVALKVRYPDRVTI 123 (319)
T ss_pred eEEecCcchhHHHHHHHH----HccCCCCCcceeeeeeecccccchH-HHH-------------HHHHHhhccccceeEE
Confidence 579999999999888765 2223233 34788999975443322 111 12211 2233455788
Q ss_pred EcCCCCCch
Q 018289 81 IGGNHEASN 89 (358)
Q Consensus 81 I~GNHE~~~ 89 (358)
+.||||...
T Consensus 124 lrGNHEsrq 132 (319)
T KOG0371|consen 124 LRGNHESRQ 132 (319)
T ss_pred ecCchHHHH
Confidence 999999763
No 124
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=90.99 E-value=0.4 Score=47.63 Aligned_cols=60 Identities=20% Similarity=0.202 Sum_probs=46.0
Q ss_pred CCCcHHHHHHHHHhCCCEEEEcCC--CCccceeeccCCCCCeeEEEEccccCCCCCeeEEEeccC
Q 018289 204 TLGSEPAAQLLEKLKPSYWFSAHL--HCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIES 266 (358)
Q Consensus 204 ~lGS~~l~~ll~~lkPrywfsGH~--H~~f~~~~~~~~~~~~TrFlaL~k~~~~rk~l~a~~i~~ 266 (358)
.-|...++++++++.=...+-||- ...|+.+-. ..-+|-|=|-.-|+........+.++.
T Consensus 230 ~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~---r~lvTIFSAP~Ycg~~~n~gavm~Vd~ 291 (331)
T KOG0374|consen 230 TFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAG---RKLVTIFSAPNYCGEFDNAGAVMRVDK 291 (331)
T ss_pred EecHHHHHHHHHHhCcceEEEcCccccccceEecC---ceEEEEecCchhccccCCceEEEEECC
Confidence 368899999999999999999994 566655432 234799999888887766677777654
No 125
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=90.98 E-value=13 Score=34.55 Aligned_cols=113 Identities=15% Similarity=0.200 Sum_probs=55.9
Q ss_pred EEEEEcCC--C-----CChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcch-----hhhccchhhhHhhhHHHHHhc
Q 018289 2 RIAVEGCM--H-----GELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNEND-----MESLNVPRKYREMKSFWKYYS 69 (358)
Q Consensus 2 kIlv~GD~--H-----G~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~d-----l~~~~~p~k~~~l~~F~~y~~ 69 (358)
+|+++||+ | -+++.+++.+..+-+ ..|++++==.......... .-.+..|+ ++-+.+
T Consensus 1 ~i~~~GDi~~~~~~~~~~~~~~~~~v~~~~~----~aD~~~~NlE~~~~~~~~~~~~~~~~~f~~~~---~~~~~l---- 69 (239)
T smart00854 1 TLSFVGDVMLGRGVYKADFSPPFAGVKPLLR----AADLAIGNLETPITGSGSPASGKKYPNFRAPP---ENAAAL---- 69 (239)
T ss_pred CEEEEeeecccCcccccCcchHHHHHHHHHh----cCCEeEEEeeccccCCCCCCCCCCceEecCCH---HHHHHH----
Confidence 47888986 2 235677777765432 4788776321110000000 01122221 222222
Q ss_pred CCCCCCccEEEEcCCCCCch---hHHHHhhCCccCCcEEEeCC---------ceEEEEcCEEEEEEeCccC
Q 018289 70 GQEVAPIPTIFIGGNHEASN---YLWELYYGGWAAPNIYFLGF---------AGVVKFGNIRIGGLSGIYN 128 (358)
Q Consensus 70 g~~~~pvpt~fI~GNHE~~~---~l~el~~gg~va~NI~yLg~---------~gv~~i~GlrIaGlsGi~~ 128 (358)
+.+.+-...+++||+..- -+.+... .+-..||.++|. .-+++++|+|||.+|-...
T Consensus 70 --~~~G~d~~~laNNH~fD~G~~gl~~t~~-~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~ 137 (239)
T smart00854 70 --KAAGFDVVSLANNHSLDYGEEGLLDTLA-ALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYG 137 (239)
T ss_pred --HHhCCCEEEeccCcccccchHHHHHHHH-HHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcC
Confidence 336677777888998751 1221110 001224444432 2355789999998876654
No 126
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=90.41 E-value=5.9 Score=36.85 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=21.0
Q ss_pred hCCCEEEEcCCCCccceeeccCCCCCeeEEEEcccc
Q 018289 217 LKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKC 252 (358)
Q Consensus 217 lkPrywfsGH~H~~f~~~~~~~~~~~~TrFlaL~k~ 252 (358)
..-...+.||-|+-..--+.+ ...-|-+|+.+
T Consensus 206 ~G~D~IiG~H~Hv~q~~E~~~----~~~I~YSlGNf 237 (239)
T cd07381 206 AGADLVIGHHPHVLQGIEIYK----GKLIFYSLGNF 237 (239)
T ss_pred CCCCEEEcCCCCcCCCeEEEC----CEEEEEcCCCc
Confidence 468999999999876543322 24566666653
No 127
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=88.07 E-value=1 Score=42.95 Aligned_cols=42 Identities=29% Similarity=0.355 Sum_probs=34.6
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccC
Q 018289 1 MRIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVR 44 (358)
Q Consensus 1 MkIlv~GD~HG~--ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~ 44 (358)
||||++||+=|. .+.+.+.+..+.++. +.|++|+=|...+..
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~ky--k~dfvI~N~ENaa~G 44 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKY--KIDFVIVNGENAAGG 44 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhh--cCcEEEEcCccccCC
Confidence 999999999996 577888888776653 699999999877654
No 128
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=86.56 E-value=1.4 Score=43.97 Aligned_cols=51 Identities=27% Similarity=0.233 Sum_probs=33.5
Q ss_pred CccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEEcCCCCCchhH
Q 018289 30 KIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYL 91 (358)
Q Consensus 30 ~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI~GNHE~~~~l 91 (358)
++|+|+..||.....+..|.+.. -|..+... ..-.+|.-.+.||||..+.+
T Consensus 100 ~PDlVVfTGD~i~g~~t~Da~~s-------l~kAvaP~----I~~~IPwA~~lGNHDdes~l 150 (379)
T KOG1432|consen 100 KPDLVVFTGDNIFGHSTQDAATS-------LMKAVAPA----IDRKIPWAAVLGNHDDESDL 150 (379)
T ss_pred CCCEEEEeCCcccccccHhHHHH-------HHHHhhhH----hhcCCCeEEEeccccccccc
Confidence 69999999997765655553321 02222222 22357899999999988655
No 129
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=85.74 E-value=6 Score=40.76 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=63.6
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhc-CCCccEEEEecCcccc-CCcchhhhccchhhhHhhhHHHHHhcCCCCC-----
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENIN-SYKIDLLLCCGDFQAV-RNENDMESLNVPRKYREMKSFWKYYSGQEVA----- 74 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~-g~~~DllI~~GDf~~~-~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~----- 74 (358)
++.+++|+|-+..++.+++.++-.+. ..++-++|.||.|.+. ++......+ ...|-..-.++...
T Consensus 284 ~fVfLSdV~LD~~~vm~aL~kifqgy~~~pP~~iIlcG~FtS~p~~~~s~~~~--------k~~f~~LA~~l~~~~~~~e 355 (525)
T KOG3818|consen 284 SFVFLSDVFLDDKKVMEALRKIFQGYKDAPPTAIILCGSFTSSPRQTSSSDQL--------KDGFRWLAAQLTCFRKDYE 355 (525)
T ss_pred eEEEEehhccccHHHHHHHHHHHhhccCCCCeEEEEeccccccccccchHHHH--------HHHHHHHHhhccccccccc
Confidence 46778999999888888887776653 3478999999999964 433322111 11122111221111
Q ss_pred CccEEEEcCCCCCc--hh-----HHHHhhCC--ccCCcEEEeCCceEEEEcCEEEEEEeC
Q 018289 75 PIPTIFIGGNHEAS--NY-----LWELYYGG--WAAPNIYFLGFAGVVKFGNIRIGGLSG 125 (358)
Q Consensus 75 pvpt~fI~GNHE~~--~~-----l~el~~gg--~va~NI~yLg~~gv~~i~GlrIaGlsG 125 (358)
....|||+|-.|.- +. +.+....+ .+++|. ++.-|.-||.++|-
T Consensus 356 kT~fIFVPGP~Dp~~~~iLPr~piP~~~~~~i~kv~~~t-------vfasNPcRIqy~sQ 408 (525)
T KOG3818|consen 356 KTQFIFVPGPNDPWVDNILPRPPIPSLFTKHISKVCKNT-------VFASNPCRIQYCSQ 408 (525)
T ss_pred cceEEEecCCCCCCcCccCCCCCchHHHHHHHHhhcCCc-------eeccCCeeeEeecc
Confidence 13469999988764 11 12222111 345544 34558889988874
No 130
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=85.59 E-value=1.4 Score=44.22 Aligned_cols=69 Identities=23% Similarity=0.338 Sum_probs=36.5
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCCc-cEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEEE
Q 018289 3 IAVEGCMHGELDNVYKTLQYMENINSYKI-DLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFI 81 (358)
Q Consensus 3 Ilv~GD~HG~ld~i~~~v~~~~~k~g~~~-DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~fI 81 (358)
|-|+||+||.+-.+.+. . +--|.|. .--+.+||...- ..-..+|+ .-.++-...-|...+..
T Consensus 90 iTVCGDIHGQf~DLmKL---F-EVGG~PA~t~YLFLGDYVDR-GyFSiECv------------lYLwsLKi~yp~tl~lL 152 (517)
T KOG0375|consen 90 ITVCGDIHGQFFDLMKL---F-EVGGSPANTRYLFLGDYVDR-GYFSIECV------------LYLWSLKINYPKTLFLL 152 (517)
T ss_pred eeEecccchHHHHHHHH---H-HccCCcccceeEeecccccc-ceeeeehH------------HHHHHHhcCCCCeEEEe
Confidence 67999999986444332 2 2223232 346778998642 22222222 11122222234444667
Q ss_pred cCCCCCc
Q 018289 82 GGNHEAS 88 (358)
Q Consensus 82 ~GNHE~~ 88 (358)
.||||..
T Consensus 153 RGNHECr 159 (517)
T KOG0375|consen 153 RGNHECR 159 (517)
T ss_pred cCCcchh
Confidence 8999986
No 131
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=81.07 E-value=1.5 Score=44.09 Aligned_cols=61 Identities=11% Similarity=0.036 Sum_probs=40.3
Q ss_pred eeeeChHHHHHHHhhCCCCCCCCCCCCCCC-----CCCCcHHHHHHHHHHhhhCCC-CCCcceeccCC
Q 018289 272 EIQYDEEWLAITRTFNSVFPLTSQSANFGG-----VQHDMNDCRQWVRSRLQERGA-KPFEFVRTVPC 333 (358)
Q Consensus 272 ~~~~d~~wl~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~f~~~~~~ 333 (358)
.-+++-+||..+|+.+.+.-..+. .++|. ....+.++.+||+|+..++.. ++.||..|||.
T Consensus 357 ~~~~f~a~l~rl~~~~~~~~~~~d-~dlps~~~~e~~t~~~~~e~~~de~~~~~~~~~~~~~~nt~p~ 423 (456)
T KOG2863|consen 357 QTSVFSAELSRLRAMHVLREIERD-IDLPSYDSPEPYTLKIQKEEMVDEKADEDFMTIARNFCNTAPH 423 (456)
T ss_pred chhhHHHHHhhhhhhhhhhhhhcC-CCccccCCccccccccHHHHHhhhhhcccccccchhhccCCCC
Confidence 457788999988887665544432 22222 123445677899998844332 49999999975
No 132
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=72.51 E-value=5.6 Score=36.40 Aligned_cols=40 Identities=33% Similarity=0.415 Sum_probs=24.2
Q ss_pred EEEEEcCCCCChH--HHHHHHHHHHHhcCCCccEEEEecCcccc
Q 018289 2 RIAVEGCMHGELD--NVYKTLQYMENINSYKIDLLLCCGDFQAV 43 (358)
Q Consensus 2 kIlv~GD~HG~ld--~i~~~v~~~~~k~g~~~DllI~~GDf~~~ 43 (358)
||++.+|.+-+.. ..+..+... ....++|++|.+||....
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~--~~~~~~d~~l~~GD~IY~ 42 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYD--HSEEDPDLFLHLGDQIYA 42 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhh--ccccCCCEEEEcCCeecc
Confidence 5788888876533 222222110 012379999999998754
No 133
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=71.95 E-value=22 Score=34.14 Aligned_cols=106 Identities=16% Similarity=0.134 Sum_probs=59.3
Q ss_pred EEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhcc---------chhhhHhhhHHHHHhcCCC
Q 018289 2 RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLN---------VPRKYREMKSFWKYYSGQE 72 (358)
Q Consensus 2 kIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~---------~p~k~~~l~~F~~y~~g~~ 72 (358)
++.++|| +.+.|.+.++...+ ..|+||+.|=++...++-..+++| .|..++.+.+|+.. ..
T Consensus 39 ~~~~VgD---~~~~I~~~l~~a~~----r~D~vI~tGGLGPT~DDiT~e~vAka~g~~lv~~~~al~~i~~~~~~---r~ 108 (255)
T COG1058 39 RITTVGD---NPDRIVEALREASE----RADVVITTGGLGPTHDDLTAEAVAKALGRPLVLDEEALAMIEEKYAK---RG 108 (255)
T ss_pred EEEecCC---CHHHHHHHHHHHHh----CCCEEEECCCcCCCccHhHHHHHHHHhCCCcccCHHHHHHHHHHHHh---cC
Confidence 5778888 56666665554432 489999999998764433223222 23334444444332 11
Q ss_pred CCCccEEEEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCc
Q 018289 73 VAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (358)
Q Consensus 73 ~~pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (358)
.+. .++-.....++.|..+-+|=+=.--+-++..+|..+..+.|.
T Consensus 109 -~~~--------~~~~~K~A~~P~Ga~~l~NpvG~APG~~v~~~~~~v~~lPGv 153 (255)
T COG1058 109 -REM--------TEANRKQAMLPEGAEVLDNPVGTAPGFVVEGNGKNVYVLPGV 153 (255)
T ss_pred -CCC--------ChhhhhhccCCCCCEeCCCCCCCCCeeEEecCCeEEEEeCCC
Confidence 110 122223344556777777654333334456688888888775
No 134
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=69.68 E-value=1.6 Score=44.75 Aligned_cols=69 Identities=30% Similarity=0.434 Sum_probs=42.6
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHhcCCC--ccEEEEecCccccCCcchhhhccchhhhHhhhHHHHHhcCCCCCCccEEE
Q 018289 3 IAVEGCMHGELDNVYKTLQYMENINSYK--IDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF 80 (358)
Q Consensus 3 Ilv~GD~HG~ld~i~~~v~~~~~k~g~~--~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l~~F~~y~~g~~~~pvpt~f 80 (358)
|-||||.||.+|.+.-. --|+|-| -.--+.-|||.. |....++.+ |--|.-| ..-|.-++.
T Consensus 167 VTiCGDLHGklDDL~~I----~yKNGlPS~~npYvFNGDFVD-RGk~siEvL--------miL~a~~----lv~P~~~~L 229 (631)
T KOG0377|consen 167 VTICGDLHGKLDDLLVI----LYKNGLPSSSNPYVFNGDFVD-RGKRSIEVL--------MILFALY----LVYPNAVHL 229 (631)
T ss_pred eEEeccccccccceEEE----EecCCCCCCCCCeeecCchhh-ccccchhhH--------HHHHHHH----hcCchhhhc
Confidence 67999999999987532 2345543 345778899974 333333222 2223333 234666778
Q ss_pred EcCCCCCc
Q 018289 81 IGGNHEAS 88 (358)
Q Consensus 81 I~GNHE~~ 88 (358)
=.||||++
T Consensus 230 NRGNHED~ 237 (631)
T KOG0377|consen 230 NRGNHEDH 237 (631)
T ss_pred cCCchHHH
Confidence 88999987
No 135
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=66.95 E-value=4.9 Score=41.25 Aligned_cols=39 Identities=23% Similarity=0.294 Sum_probs=17.9
Q ss_pred CEEEEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccC
Q 018289 1 MRIAVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVR 44 (358)
Q Consensus 1 MkIlv~GD~HG~--ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~ 44 (358)
+||++.||.+.+ .-.+|+.+ .++ .++|++|++||.....
T Consensus 106 ~r~a~~SC~~~~~~~~~~~~~~---a~~--~~~D~~l~lGD~IY~d 146 (453)
T PF09423_consen 106 FRFAFGSCQNYEDGYFPAYRRI---AER--DDPDFVLHLGDQIYED 146 (453)
T ss_dssp EEEEEE----CCC---HHHHHH---TT---S--SEEEE-S-SS---
T ss_pred eEEEEECCCCcccChHHHHHhh---hcc--CCCcEEEEeCCeeecc
Confidence 589999999864 34455544 222 2699999999987544
No 136
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=63.59 E-value=21 Score=27.43 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=28.5
Q ss_pred CEEEEEcCCCC-ChHHHHHHHHHHHHhcCCCccEEEEecCc
Q 018289 1 MRIAVEGCMHG-ELDNVYKTLQYMENINSYKIDLLLCCGDF 40 (358)
Q Consensus 1 MkIlv~GD~HG-~ld~i~~~v~~~~~k~g~~~DllI~~GDf 40 (358)
|||+|+|.-.= +.+.|++.+.++.++. .+++|+.|.-
T Consensus 4 ~rVli~GgR~~~D~~~i~~~Ld~~~~~~---~~~~lvhGga 41 (71)
T PF10686_consen 4 MRVLITGGRDWTDHELIWAALDKVHARH---PDMVLVHGGA 41 (71)
T ss_pred CEEEEEECCccccHHHHHHHHHHHHHhC---CCEEEEECCC
Confidence 89999997553 6778998888877764 5777888764
No 137
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=60.56 E-value=26 Score=37.34 Aligned_cols=67 Identities=22% Similarity=0.312 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchh--hhccchhhhHhhh-HHHHHhcCCCCCCccEEEEcCCCCCc
Q 018289 13 LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDM--ESLNVPRKYREMK-SFWKYYSGQEVAPIPTIFIGGNHEAS 88 (358)
Q Consensus 13 ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl--~~~~~p~k~~~l~-~F~~y~~g~~~~pvpt~fI~GNHE~~ 88 (358)
...+-+.+..+.+ +...+|.+|..||......-... +.+++ +.++- -+.+|. -.+|+|.-.||||..
T Consensus 194 ~~lies~L~~ike-~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~---~~~l~~~~~e~F-----pdvpvypalGNhe~~ 263 (577)
T KOG3770|consen 194 KRLIESALDHIKE-NHKDIDYIIWTGDNVAHDVWAQTEEENLSM---LSRLTSLLSEYF-----PDVPVYPALGNHEIH 263 (577)
T ss_pred HHHHHHHHHHHHh-cCCCCCEEEEeCCCCcccchhhhHHHHHHH---HHHHHHHHHHhC-----CCCceeeecccCCCC
Confidence 3445555555533 33259999999999875321111 11110 11111 122332 268999999999975
No 138
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=59.47 E-value=25 Score=33.75 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=26.8
Q ss_pred EEEcCCCCC--hHHHHHHHHHHHHhcCCCccEEEEecCccccC
Q 018289 4 AVEGCMHGE--LDNVYKTLQYMENINSYKIDLLLCCGDFQAVR 44 (358)
Q Consensus 4 lv~GD~HG~--ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~ 44 (358)
|++||+=|+ .+.+.+.+..+.++. .+|++|+-|.-.+..
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~--~~DfVIaNgENaa~G 41 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEY--GIDFVIANGENAAGG 41 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG----G-SEEEEE-TTTTTT
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhc--CCCEEEECCcccCCC
Confidence 689999996 467777788876665 599999999976554
No 139
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=47.73 E-value=16 Score=31.91 Aligned_cols=21 Identities=38% Similarity=0.472 Sum_probs=16.9
Q ss_pred HHHHhCCCEEEEcCCCCccce
Q 018289 213 LLEKLKPSYWFSAHLHCKFAA 233 (358)
Q Consensus 213 ll~~lkPrywfsGH~H~~f~~ 233 (358)
++.+.+|++++|||.|.....
T Consensus 117 ~~~~~~~~~~l~GH~H~~~~~ 137 (156)
T cd08165 117 LLQWLKPRLVLSGHTHSFCEV 137 (156)
T ss_pred HHHhhCCCEEEEcccCCCcee
Confidence 566779999999999985543
No 140
>KOG1625 consensus DNA polymerase alpha-primase complex, polymerase-associated subunit B [Replication, recombination and repair]
Probab=44.92 E-value=1.9e+02 Score=31.02 Aligned_cols=107 Identities=12% Similarity=0.173 Sum_probs=61.2
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhhhccchhhhHhh--hHHHHHhcCCCCCCccEEEEcCCCCCchh
Q 018289 13 LDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREM--KSFWKYYSGQEVAPIPTIFIGGNHEASNY 90 (358)
Q Consensus 13 ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~n~~dl~~~~~p~k~~~l--~~F~~y~~g~~~~pvpt~fI~GNHE~~~~ 90 (358)
++.+.+.|..++++ ++|+||.+|=|...++. -+...+++-.+.++ ..+..++++.....+-+++|+--.|+..
T Consensus 358 yepL~dll~~v~~~---~pdvLIL~GPFlD~~h~-~i~~~~~t~t~delF~~~i~~ile~~~~~~~~vVlvPs~~Da~~- 432 (600)
T KOG1625|consen 358 YEPLCDLLDYVNAE---RPDVLILFGPFLDSKHP-LINKGALTITFDELFEKLILGILETLVGSKTQVVLVPSTNDALC- 432 (600)
T ss_pred hhHHHHHHHHHhcC---CCCEEEEeccccCccCh-hhccCCcCccHHHHHHHHHHHHHHhccCCcceEEEecccccccc-
Confidence 45566666665443 79999999999865432 12222222223332 2233444443322345788887665542
Q ss_pred HHHHh-----hCCccC--CcEEEeCCceEEEEcCEEEEEEe
Q 018289 91 LWELY-----YGGWAA--PNIYFLGFAGVVKFGNIRIGGLS 124 (358)
Q Consensus 91 l~el~-----~gg~va--~NI~yLg~~gv~~i~GlrIaGls 124 (358)
+.-.+ ..+-.- .|++++++-..+.|+|+.+|-.|
T Consensus 433 ~~vfPq~pf~~~~~~~~~~~l~~~~nPc~f~in~v~vg~ts 473 (600)
T KOG1625|consen 433 LPVFPQPPFARNRLSDEKKNLKCVANPCLFSINGVEVGVTS 473 (600)
T ss_pred CccCCCCchhhhhccCcccceEEccCcceEEEccEEEEeec
Confidence 11111 111113 49999999999999999988654
No 141
>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A.
Probab=42.48 E-value=30 Score=29.85 Aligned_cols=121 Identities=23% Similarity=0.282 Sum_probs=57.2
Q ss_pred CccEEEEcCCCCCchhHHHHhhCCccCCcEEEeCCceEEEEcCEEEEEEeCccCCc-cCCCCCCCCCCC--ChhhHhhhh
Q 018289 75 PIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNAR-HYRLGHYERPPY--NESTIRSVY 151 (358)
Q Consensus 75 pvpt~fI~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~-~y~~~~~e~~Py--~~~~~~s~y 151 (358)
.+-.++|-=.|.+.-....+ ..+.+++.++...+.++++|++|-++....... ....+ +..-| +.+ =.++|
T Consensus 36 ~~D~IlisH~H~DH~~~~~l---~~~~~~~~vv~~~~~~~~~~~~i~~v~~~~~~~~~~~~~--~~~~~~i~~~-g~~i~ 109 (163)
T PF13483_consen 36 KADAILISHSHPDHFDPETL---KRLDRDIHVVAPGGEYRFGGFKITAVPAYHDGPGGHPRG--ENVGYLIEVG-GVTIY 109 (163)
T ss_dssp B-SEEEESSSSTTT-CCCCC---CCHHTSSEEE-TTEEEECTTEEEEEEEEEE-STGTS-TT--CCEEEEEEET-TEEEE
T ss_pred CCCEEEECCCccccCChhHh---hhcccccEEEccceEEEEeeeEEEEEeeeccccCCCCcC--CeEEEEEEeC-CCEEE
Confidence 34467777777554211000 011347777878888888999987776543211 11110 00001 111 12345
Q ss_pred hhhhHH----HHHHhccCCCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcC
Q 018289 152 HVREYD----VHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAH 226 (358)
Q Consensus 152 h~re~d----v~kL~~~~~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH 226 (358)
|.-... ...+.++ .++||++.---.. ...|.+.+.+++++++||+.+--|
T Consensus 110 ~~Gd~~~~~~~~~~~~~-~~vDvl~~p~~g~------------------------~~~~~~~a~~~~~~l~pk~viP~H 163 (163)
T PF13483_consen 110 HAGDTGFPPDDEQLKQL-GKVDVLFLPVGGP------------------------FTMGPEEAAELAERLKPKLVIPMH 163 (163)
T ss_dssp E-TT--S---HHHHHHH--S-SEEEEE--TT------------------------TS--HHHHHHHHHHCT-SEEEEES
T ss_pred EECCCccCCCHHHHhcc-cCCCEEEecCCCC------------------------cccCHHHHHHHHHHcCCCEEEeCC
Confidence 422111 2223333 5789988743321 135667789999999999988654
No 142
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=39.08 E-value=24 Score=25.43 Aligned_cols=27 Identities=26% Similarity=0.497 Sum_probs=19.7
Q ss_pred hhHHHHHhcCCCCCCccEEEEcCCCCCchh
Q 018289 61 MKSFWKYYSGQEVAPIPTIFIGGNHEASNY 90 (358)
Q Consensus 61 l~~F~~y~~g~~~~pvpt~fI~GNHE~~~~ 90 (358)
|.|...++ ...++--+||+|.|++..|
T Consensus 12 M~DLrS~I---~~~~I~ql~ipGsHns~ty 38 (51)
T PF03490_consen 12 MSDLRSSI---GEMAITQLFIPGSHNSGTY 38 (51)
T ss_pred HHHHHHHH---hcceeeeEEeccccccccc
Confidence 55666664 3457788999999988765
No 143
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=29.96 E-value=51 Score=27.25 Aligned_cols=41 Identities=32% Similarity=0.525 Sum_probs=24.7
Q ss_pred hhhHHHHHhcCCCCCCccEEEEcCCCCCc-hhHHHHhhCCccCC
Q 018289 60 EMKSFWKYYSGQEVAPIPTIFIGGNHEAS-NYLWELYYGGWAAP 102 (358)
Q Consensus 60 ~l~~F~~y~~g~~~~pvpt~fI~GNHE~~-~~l~el~~gg~va~ 102 (358)
++++-...++|.+ .+|.+||+|+|=-. +.+.++...|.+.+
T Consensus 54 eiq~~l~~~tg~~--tvP~vFI~Gk~iGG~~dl~~lh~~G~L~~ 95 (104)
T KOG1752|consen 54 EIQKALKKLTGQR--TVPNVFIGGKFIGGASDLMALHKSGELVP 95 (104)
T ss_pred HHHHHHHHhcCCC--CCCEEEECCEEEcCHHHHHHHHHcCCHHH
Confidence 3444444555554 67899999988543 44556655555433
No 144
>COG2047 Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]
Probab=29.66 E-value=70 Score=30.38 Aligned_cols=20 Identities=35% Similarity=0.458 Sum_probs=16.3
Q ss_pred CCccEEEEecCccccCCcch
Q 018289 29 YKIDLLLCCGDFQAVRNEND 48 (358)
Q Consensus 29 ~~~DllI~~GDf~~~~n~~d 48 (358)
..-|++|.+||+|+..+...
T Consensus 82 ~~~Dliil~Gd~Q~~~~~gq 101 (258)
T COG2047 82 GERDLIILVGDTQATSSEGQ 101 (258)
T ss_pred CCCcEEEEeccccccCcchh
Confidence 36799999999999776554
No 145
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=28.15 E-value=93 Score=30.53 Aligned_cols=43 Identities=12% Similarity=0.063 Sum_probs=28.7
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhc------CCCccEEEEecCcccc
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENIN------SYKIDLLLCCGDFQAV 43 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~------g~~~DllI~~GDf~~~ 43 (358)
.||.|+||+|=+--...++++++-+.- ....-++|.||+|.+.
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~ 76 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISL 76 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCC
Confidence 378899999987555555554443322 1136789999999865
No 146
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=26.91 E-value=1.4e+02 Score=31.41 Aligned_cols=23 Identities=22% Similarity=0.361 Sum_probs=17.1
Q ss_pred HHHHHHHHh-CCCEEEEcCCCCcc
Q 018289 209 PAAQLLEKL-KPSYWFSAHLHCKF 231 (358)
Q Consensus 209 ~l~~ll~~l-kPrywfsGH~H~~f 231 (358)
.+.+++++. +.+.|||||.|...
T Consensus 389 eLlaLL~~hPnVla~LsGHvHrn~ 412 (492)
T TIGR03768 389 GLVTTLQKYPNLLMWIAGHRHLNT 412 (492)
T ss_pred HHHHHHhcCCCeEEEEcCCccccc
Confidence 466666665 56889999999654
No 147
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=26.45 E-value=5.2e+02 Score=27.99 Aligned_cols=31 Identities=26% Similarity=0.367 Sum_probs=18.7
Q ss_pred EEEcCCCCCchh-H--------HHHhhCCccCCcEEEeCC
Q 018289 79 IFIGGNHEASNY-L--------WELYYGGWAAPNIYFLGF 109 (358)
Q Consensus 79 ~fI~GNHE~~~~-l--------~el~~gg~va~NI~yLg~ 109 (358)
+...||||...+ . .....+-.+|.||-.-+.
T Consensus 125 ~l~lGNHEl~~~~ve~l~~~~f~~~~k~~~la~Nv~~~~~ 164 (602)
T KOG4419|consen 125 ILTLGNHELYQANVENLTEEYFLPAWKGPYLASNVQIFDS 164 (602)
T ss_pred hhhhcchhhhhhhhhccchhhhhhhhccceeecceEEecC
Confidence 446799998755 2 122245567777765443
No 148
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=24.56 E-value=3.1e+02 Score=24.56 Aligned_cols=59 Identities=17% Similarity=0.120 Sum_probs=45.2
Q ss_pred CCccEEEeCCCCCCcccCCcchhhhhhccchhhcccCCCCCcHHHHHHHHHhCCCEEEEcCCCCccceeeccCCCCCeeE
Q 018289 166 EPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTK 245 (358)
Q Consensus 166 ~~vDIlLSHdwP~gI~~~g~~~~l~~~kp~f~~~i~~~~lGS~~l~~ll~~lkPrywfsGH~H~~f~~~~~~~~~~~~Tr 245 (358)
.++-|++||-+=..+.. .-..+..+++.......++||.|........ .+.
T Consensus 80 ~g~ki~l~HGh~~~~~~-----------------------~~~~l~~la~~~~~Dvli~GHTH~p~~~~~~------~i~ 130 (172)
T COG0622 80 GGVKIFLTHGHLYFVKT-----------------------DLSLLEYLAKELGADVLIFGHTHKPVAEKVG------GIL 130 (172)
T ss_pred CCEEEEEECCCcccccc-----------------------CHHHHHHHHHhcCCCEEEECCCCcccEEEEC------CEE
Confidence 56889999987655221 1235788889999999999999998876653 388
Q ss_pred EEEccccC
Q 018289 246 FLALDKCL 253 (358)
Q Consensus 246 FlaL~k~~ 253 (358)
++|-+.+-
T Consensus 131 ~vNPGS~s 138 (172)
T COG0622 131 LVNPGSVS 138 (172)
T ss_pred EEcCCCcC
Confidence 99888875
No 149
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ....
Probab=22.82 E-value=82 Score=25.92 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=21.4
Q ss_pred CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEec
Q 018289 1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCG 38 (358)
Q Consensus 1 MkIlv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~G 38 (358)
|||||+|.. |+-++|-.++.+ + ..++-|+|+-
T Consensus 1 MkVLviGsG-gREHAia~~l~~----s-~~v~~v~~aP 32 (100)
T PF02844_consen 1 MKVLVIGSG-GREHAIAWKLSQ----S-PSVEEVYVAP 32 (100)
T ss_dssp EEEEEEESS-HHHHHHHHHHTT----C-TTEEEEEEEE
T ss_pred CEEEEECCC-HHHHHHHHHHhc----C-CCCCEEEEeC
Confidence 999999986 666677665532 2 2566666653
No 150
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753).
Probab=22.57 E-value=1.2e+02 Score=28.46 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=25.2
Q ss_pred EEEEEcCC----------CCChHHHHHHHHHHHHhcCCCccEEEEecC
Q 018289 2 RIAVEGCM----------HGELDNVYKTLQYMENINSYKIDLLLCCGD 39 (358)
Q Consensus 2 kIlv~GD~----------HG~ld~i~~~v~~~~~k~g~~~DllI~~GD 39 (358)
+++++||+ -|+...++++++++.+ -+.+.+|+||=
T Consensus 120 ~~lftGDtl~~~g~g~~~~~~~~~~~~Sl~~l~~---l~~~~~i~pGH 164 (248)
T TIGR03413 120 PALFCGDTLFSAGCGRLFEGTPEQMYDSLQRLAA---LPDDTLVYCAH 164 (248)
T ss_pred CEEEEcCccccCCcCCCCCCCHHHHHHHHHHHHc---CCCCeEEECCC
Confidence 57888886 3567788877776643 36788888885
No 151
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=22.53 E-value=64 Score=25.60 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=17.2
Q ss_pred ChHHHHHHHHHHHHhcCCCccEEEEecCcccc
Q 018289 12 ELDNVYKTLQYMENINSYKIDLLLCCGDFQAV 43 (358)
Q Consensus 12 ~ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~ 43 (358)
..+.+++.+..+-+... ..-+|++|||=+.
T Consensus 13 ~~~~~~~~l~~~~~~~~--~~~~Ii~GDFN~~ 42 (119)
T PF14529_consen 13 EREEFFDQLRQLLKNLP--PAPIIIGGDFNAH 42 (119)
T ss_dssp -CHHHHHHHHHHHHCCT--TSSEEEEEE----
T ss_pred cHHHHHHHHHHHHHhCC--CCCEEEEeECCCC
Confidence 35667777776655533 1289999999764
No 152
>cd06403 PB1_Par6 The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The
Probab=22.51 E-value=4e+02 Score=21.16 Aligned_cols=42 Identities=24% Similarity=0.594 Sum_probs=29.9
Q ss_pred EEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEe----cCccccCCcc
Q 018289 4 AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCC----GDFQAVRNEN 47 (358)
Q Consensus 4 lv~GD~HG~ld~i~~~v~~~~~k~g~~~DllI~~----GDf~~~~n~~ 47 (358)
.+--...+.++.+|..+++++.-. .++++||- ||+-...|.+
T Consensus 15 sl~r~~~~~f~ef~~ll~~lH~l~--~~~f~i~Y~D~~gDLLPInNDd 60 (80)
T cd06403 15 SLDRNKPGKFEDFYKLLEHLHHIP--NVDFLIGYTDPHGDLLPINNDD 60 (80)
T ss_pred EeccccCcCHHHHHHHHHHHhCCC--CCcEEEEEeCCCCCEecccCcH
Confidence 333345689999999999887654 48888887 6666665543
No 153
>KOG3592 consensus Microtubule-associated proteins [Cytoskeleton]
Probab=22.43 E-value=2.2e+02 Score=31.54 Aligned_cols=57 Identities=23% Similarity=0.231 Sum_probs=33.2
Q ss_pred hhHHHHHhcCCCCCCccEEEEcCCCCCchhHHHHhhCCcc---CCcEEEeCC----ceEEEEcCEEEEEEeCcc
Q 018289 61 MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWA---APNIYFLGF----AGVVKFGNIRIGGLSGIY 127 (358)
Q Consensus 61 l~~F~~y~~g~~~~pvpt~fI~GNHE~~~~l~el~~gg~v---a~NI~yLg~----~gv~~i~GlrIaGlsGi~ 127 (358)
+.+|.+|++.....|.|.= .+..-..||.+ .|.+|.++. +..+-++|+.|.--||..
T Consensus 4 l~eF~eyvsesvevpspfd----------llepptsggflklSKpCcYIfpGg~gdaALFavnGf~iLv~Ggse 67 (934)
T KOG3592|consen 4 LSEFTEYVSESVEVPSPFD----------LLEPPTSGGFLKLSKPCCYIFPGGRGDAALFAVNGFNILVNGGSE 67 (934)
T ss_pred HHHHHHHHHHhhcCCChHh----------hcCCCCCccchhcCCceEEECCCCCCcceeEeecceEEeecCCcc
Confidence 5689999877655554421 11111134433 466766633 346678999997666654
No 154
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=20.53 E-value=94 Score=21.94 Aligned_cols=12 Identities=33% Similarity=0.880 Sum_probs=10.0
Q ss_pred CCccEEEEcCCC
Q 018289 74 APIPTIFIGGNH 85 (358)
Q Consensus 74 ~pvpt~fI~GNH 85 (358)
..+|++||+|+|
T Consensus 48 ~~~P~v~i~g~~ 59 (60)
T PF00462_consen 48 RTVPQVFIDGKF 59 (60)
T ss_dssp SSSSEEEETTEE
T ss_pred CccCEEEECCEE
Confidence 567999999975
No 155
>COG5214 POL12 DNA polymerase alpha-primase complex, polymerase-associated subunit B [DNA replication, recombination, and repair]
Probab=20.28 E-value=4.4e+02 Score=27.48 Aligned_cols=106 Identities=16% Similarity=0.254 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCccccC----CcchhhhccchhhhHhhhH-HHHHhcCC-CCCCcc-EEEEcCCC
Q 018289 13 LDNVYKTLQYMENINSYKIDLLLCCGDFQAVR----NENDMESLNVPRKYREMKS-FWKYYSGQ-EVAPIP-TIFIGGNH 85 (358)
Q Consensus 13 ld~i~~~v~~~~~k~g~~~DllI~~GDf~~~~----n~~dl~~~~~p~k~~~l~~-F~~y~~g~-~~~pvp-t~fI~GNH 85 (358)
+..+++.|..+++ .++|+||.||-|.... ....+.. .|++ -|.+ |.+..++. ++...| ++.|+--.
T Consensus 322 ~~pl~~~id~vn~---n~vdvlIl~GPFidi~h~li~~G~~~~--t~~~--~l~ElF~~r~tpiL~~~~~p~~vLIPstn 394 (581)
T COG5214 322 GSPLFDAIDRVNA---NDVDVLILIGPFIDINHILIQYGATQS--TPDS--MLKELFIPRITPILDRNAGPKAVLIPSTN 394 (581)
T ss_pred cChHHHHHHHhcc---CCccEEEEeccccCcchhhhhhCCCCC--CChh--HHHHHHHHhhhHHHhccCCCceEEecccc
Confidence 3456666666654 2799999999997541 0000000 0111 1111 33333321 223334 88999877
Q ss_pred CCchhHHHHhhCC------ccCCcEEEeCCceEEEEcCEEEEEEeCc
Q 018289 86 EASNYLWELYYGG------WAAPNIYFLGFAGVVKFGNIRIGGLSGI 126 (358)
Q Consensus 86 E~~~~l~el~~gg------~va~NI~yLg~~gv~~i~GlrIaGlsGi 126 (358)
|+.+-....+.|. .+-.|..+++.-.-+.|+.+-+| +|..
T Consensus 395 Da~s~h~a~PQ~~~~r~al~lp~nfkC~~NPc~F~INei~fg-~Ss~ 440 (581)
T COG5214 395 DATSCHNAFPQGPIGRNALRLPSNFKCTGNPCEFFINEILFG-ISSL 440 (581)
T ss_pred chhhccccCCccccchhhhcCCccccccCCcceeEeeeeEEE-eccC
Confidence 7653322222221 24457777887777778877665 4443
Done!